Query 042634
Match_columns 427
No_of_seqs 398 out of 2513
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 14:02:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042634.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042634hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 2.8E-49 9.6E-54 368.3 8.2 203 179-422 89-303 (307)
2 4asz_A BDNF/NT-3 growth factor 100.0 2.1E-48 7.2E-53 362.3 5.6 202 179-421 72-291 (299)
3 4aoj_A High affinity nerve gro 100.0 1.9E-47 6.5E-52 360.6 11.2 201 179-420 100-320 (329)
4 4gt4_A Tyrosine-protein kinase 100.0 8.1E-48 2.8E-52 359.8 7.5 198 179-417 86-304 (308)
5 4g3f_A NF-kappa-beta-inducing 100.0 4.3E-47 1.5E-51 357.0 11.2 200 179-421 107-318 (336)
6 4ase_A Vascular endothelial gr 100.0 3.8E-47 1.3E-51 361.5 8.1 203 179-420 125-348 (353)
7 3hmm_A TGF-beta receptor type- 100.0 5.8E-46 2E-50 347.8 13.0 214 179-420 54-298 (303)
8 4b9d_A Serine/threonine-protei 100.0 1.5E-46 5.1E-51 354.9 6.5 192 179-413 80-277 (350)
9 3fpq_A Serine/threonine-protei 100.0 6.3E-46 2.2E-50 343.2 10.3 195 179-413 82-283 (290)
10 4fih_A Serine/threonine-protei 100.0 5E-46 1.7E-50 350.7 9.5 191 179-413 128-324 (346)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.2E-45 4.2E-50 343.0 5.6 188 179-412 89-284 (311)
12 3ubd_A Ribosomal protein S6 ki 100.0 2.6E-45 8.8E-50 340.8 6.5 188 179-412 83-281 (304)
13 4fie_A Serine/threonine-protei 100.0 5.7E-45 2E-49 351.8 9.1 191 179-413 205-401 (423)
14 3hyh_A Carbon catabolite-derep 100.0 6.6E-45 2.3E-49 333.5 8.4 188 179-413 70-263 (275)
15 4g31_A Eukaryotic translation 100.0 3.1E-43 1.1E-47 327.9 7.6 195 179-412 60-279 (299)
16 4f9c_A Cell division cycle 7-r 100.0 7.2E-42 2.5E-46 327.1 7.2 138 179-331 77-250 (361)
17 4b99_A Mitogen-activated prote 100.0 2.5E-41 8.6E-46 326.8 9.4 221 179-413 110-345 (398)
18 3v5w_A G-protein coupled recep 100.0 7.9E-41 2.7E-45 337.3 9.7 191 179-412 249-449 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 2.1E-39 7.1E-44 328.2 11.1 194 179-413 211-411 (573)
20 3soc_A Activin receptor type-2 100.0 3E-38 1E-42 299.1 12.8 222 179-420 75-319 (322)
21 2qkw_B Protein kinase; three-h 100.0 9.3E-38 3.2E-42 295.5 15.7 214 179-419 92-315 (321)
22 3q4u_A Activin receptor type-1 100.0 4.5E-38 1.5E-42 294.7 12.7 211 179-417 59-300 (301)
23 3s95_A LIMK-1, LIM domain kina 100.0 2.5E-38 8.4E-43 298.0 9.3 203 179-423 64-286 (310)
24 3op5_A Serine/threonine-protei 100.0 1.2E-38 4.3E-43 306.9 7.2 213 178-421 104-331 (364)
25 3lb7_A RAF proto-oncogene seri 100.0 4.1E-38 1.4E-42 296.0 10.6 202 179-421 89-302 (307)
26 3mdy_A Bone morphogenetic prot 100.0 2.4E-37 8.3E-42 294.4 15.2 212 179-421 88-333 (337)
27 3uim_A Brassinosteroid insensi 100.0 1.2E-37 4E-42 295.4 12.7 214 179-416 84-308 (326)
28 2psq_A Fibroblast growth facto 100.0 8.7E-38 3E-42 301.4 11.7 201 180-421 145-366 (370)
29 3p86_A Serine/threonine-protei 100.0 4.4E-38 1.5E-42 296.1 9.1 201 179-420 91-299 (309)
30 3g2f_A Bone morphogenetic prot 100.0 2.9E-38 1E-42 300.8 7.8 226 178-424 63-323 (336)
31 3cbl_A C-FES, proto-oncogene t 100.0 3.9E-38 1.3E-42 304.8 8.7 198 179-420 169-375 (377)
32 3fxz_A Serine/threonine-protei 100.0 8.9E-38 3E-42 292.4 8.6 190 179-412 74-269 (297)
33 3kul_A Ephrin type-A receptor 100.0 1.4E-37 4.7E-42 294.9 9.6 198 179-420 107-314 (325)
34 3ugc_A Tyrosine-protein kinase 100.0 8.8E-38 3E-42 292.0 6.4 218 179-422 68-294 (295)
35 1k9a_A Carboxyl-terminal SRC k 100.0 4.8E-37 1.6E-41 303.8 11.3 200 179-420 243-446 (450)
36 3vhe_A Vascular endothelial gr 100.0 2.1E-37 7.2E-42 297.6 8.4 203 180-421 84-357 (359)
37 3fe3_A MAP/microtubule affinit 100.0 2.7E-37 9.3E-42 292.9 8.6 189 179-413 71-265 (328)
38 2nru_A Interleukin-1 receptor- 100.0 2.9E-36 9.9E-41 283.3 15.4 210 179-419 87-306 (307)
39 2qol_A Ephrin receptor; recept 100.0 3.3E-37 1.1E-41 297.6 9.0 198 179-420 103-310 (373)
40 3poz_A Epidermal growth factor 100.0 2.7E-37 9.3E-42 293.1 8.1 197 179-420 74-279 (327)
41 4hcu_A Tyrosine-protein kinase 100.0 3.8E-37 1.3E-41 283.8 8.7 198 179-420 62-267 (269)
42 3c1x_A Hepatocyte growth facto 100.0 3.9E-37 1.3E-41 296.9 9.0 201 179-422 147-358 (373)
43 2eva_A TAK1 kinase - TAB1 chim 100.0 5.4E-37 1.8E-41 288.5 9.7 204 179-421 58-265 (307)
44 1mp8_A Focal adhesion kinase 1 100.0 4.5E-37 1.6E-41 285.2 9.0 198 179-421 73-278 (281)
45 3kex_A Receptor tyrosine-prote 100.0 1.4E-36 4.8E-41 288.0 12.5 197 179-420 72-277 (325)
46 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.2E-37 1.1E-41 284.1 7.7 198 179-420 60-265 (268)
47 2ivs_A Proto-oncogene tyrosine 100.0 7.1E-37 2.4E-41 288.3 10.1 201 179-420 83-312 (314)
48 3zgw_A Maternal embryonic leuc 100.0 4.2E-37 1.4E-41 293.4 8.4 189 179-413 65-261 (347)
49 1qcf_A Haematopoetic cell kina 100.0 4.5E-37 1.5E-41 304.4 8.4 197 179-419 240-444 (454)
50 3tki_A Serine/threonine-protei 100.0 8.9E-37 3E-41 289.0 9.8 192 179-413 62-262 (323)
51 3tt0_A Basic fibroblast growth 100.0 9.7E-37 3.3E-41 295.5 10.2 200 180-420 133-353 (382)
52 1rjb_A FL cytokine receptor; k 100.0 4.7E-37 1.6E-41 293.5 7.9 204 180-423 107-338 (344)
53 4euu_A Serine/threonine-protei 100.0 5.8E-36 2E-40 282.9 15.3 223 179-417 64-307 (319)
54 2v62_A Serine/threonine-protei 100.0 5.7E-37 1.9E-41 293.1 8.4 208 179-418 105-327 (345)
55 3gen_A Tyrosine-protein kinase 100.0 1E-36 3.5E-41 283.0 9.8 198 179-420 76-281 (283)
56 3f66_A Hepatocyte growth facto 100.0 1.2E-36 4.3E-41 284.6 10.3 200 179-421 83-293 (298)
57 3brb_A Proto-oncogene tyrosine 100.0 1.7E-36 5.8E-41 285.8 11.3 208 179-422 93-311 (313)
58 3og7_A AKAP9-BRAF fusion prote 100.0 5.7E-37 1.9E-41 285.8 7.8 200 179-419 77-288 (289)
59 1t46_A HOMO sapiens V-KIT hard 100.0 6E-37 2.1E-41 288.6 8.0 205 180-424 85-312 (313)
60 4f0f_A Serine/threonine-protei 100.0 2E-36 6.9E-41 281.6 11.4 196 179-417 80-287 (287)
61 4dc2_A Protein kinase C IOTA t 100.0 6E-37 2E-41 296.9 8.0 189 179-407 110-307 (396)
62 3l9p_A Anaplastic lymphoma kin 100.0 5.2E-37 1.8E-41 295.7 7.5 201 179-420 131-346 (367)
63 1tki_A Titin; serine kinase, m 100.0 1.2E-36 4.1E-41 287.8 9.8 194 179-413 58-258 (321)
64 3kmu_A ILK, integrin-linked ki 100.0 6E-37 2E-41 282.4 7.5 201 179-419 64-270 (271)
65 1luf_A Muscle-specific tyrosin 100.0 3.7E-37 1.3E-41 294.0 6.3 205 179-424 107-340 (343)
66 1opk_A P150, C-ABL, proto-onco 100.0 7.6E-37 2.6E-41 305.8 8.8 197 179-418 273-477 (495)
67 1csn_A Casein kinase-1; phosph 100.0 2.4E-36 8.3E-41 282.5 11.5 204 179-422 63-286 (298)
68 1nxk_A MAP kinase-activated pr 100.0 2.1E-36 7.2E-41 294.6 10.8 201 179-413 112-322 (400)
69 1o6l_A RAC-beta serine/threoni 100.0 1.7E-36 6E-41 288.2 9.9 189 179-413 62-261 (337)
70 1b6c_B TGF-B superfamily recep 100.0 4.3E-36 1.5E-40 286.4 12.7 215 179-421 93-338 (342)
71 3lzb_A Epidermal growth factor 100.0 1.3E-36 4.3E-41 288.5 8.8 197 179-420 74-279 (327)
72 3dtc_A Mitogen-activated prote 100.0 4.2E-37 1.5E-41 283.7 5.3 194 179-417 63-271 (271)
73 2i1m_A Macrophage colony-stimu 100.0 9.3E-37 3.2E-41 290.1 7.5 203 180-422 108-329 (333)
74 3c0i_A Peripheral plasma membr 100.0 2.3E-36 7.8E-41 289.5 10.2 195 179-412 83-286 (351)
75 4eqm_A Protein kinase; transfe 100.0 8E-37 2.7E-41 285.5 6.5 199 179-418 68-274 (294)
76 3pls_A Macrophage-stimulating 100.0 4E-36 1.4E-40 281.0 11.1 202 179-422 79-290 (298)
77 2yab_A Death-associated protei 100.0 3.3E-36 1.1E-40 288.9 10.8 192 179-412 72-272 (361)
78 3gxj_A TGF-beta receptor type- 100.0 2.9E-38 1E-42 296.2 -3.6 215 179-421 54-299 (303)
79 2c30_A Serine/threonine-protei 100.0 5.8E-36 2E-40 283.2 12.1 191 179-413 99-295 (321)
80 3txo_A PKC-L, NPKC-ETA, protei 100.0 7.6E-37 2.6E-41 292.5 5.5 187 180-412 82-280 (353)
81 2ozo_A Tyrosine-protein kinase 100.0 3.5E-36 1.2E-40 308.0 10.8 198 179-421 393-600 (613)
82 3qup_A Tyrosine-protein kinase 100.0 3.4E-36 1.2E-40 284.9 9.9 206 179-420 82-299 (323)
83 2izr_A Casein kinase I isoform 100.0 5.2E-36 1.8E-40 284.7 11.2 203 180-421 63-283 (330)
84 3cc6_A Protein tyrosine kinase 100.0 1.8E-36 6.2E-41 281.1 7.8 197 179-420 70-274 (281)
85 1fot_A TPK1 delta, CAMP-depend 100.0 3.9E-36 1.3E-40 283.7 10.1 188 179-412 63-258 (318)
86 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.6E-36 5.4E-41 300.3 7.7 197 179-419 236-440 (452)
87 2xir_A Vascular endothelial gr 100.0 2.1E-36 7.1E-41 285.4 8.0 203 180-421 89-312 (316)
88 3a8x_A Protein kinase C IOTA t 100.0 2.2E-36 7.4E-41 288.7 8.2 189 179-407 67-264 (345)
89 3llt_A Serine/threonine kinase 100.0 8.3E-36 2.8E-40 286.7 12.3 142 179-331 93-262 (360)
90 3g33_A Cell division protein k 100.0 6E-36 2.1E-40 281.4 11.1 221 180-413 72-297 (308)
91 3soa_A Calcium/calmodulin-depe 100.0 7.9E-36 2.7E-40 293.7 12.3 192 179-412 67-267 (444)
92 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.3E-36 7.7E-41 287.2 7.8 188 179-413 66-259 (336)
93 1byg_A CSK, protein (C-termina 100.0 3.5E-36 1.2E-40 278.7 8.7 200 179-420 71-274 (278)
94 1xjd_A Protein kinase C, theta 100.0 1.2E-36 4.1E-41 290.1 5.7 187 179-411 75-268 (345)
95 2y0a_A Death-associated protei 100.0 7.1E-36 2.4E-40 283.2 10.9 193 179-413 71-272 (326)
96 3t9t_A Tyrosine-protein kinase 100.0 3.7E-36 1.3E-40 276.7 8.6 198 179-420 60-265 (267)
97 1u59_A Tyrosine-protein kinase 100.0 5.8E-36 2E-40 278.6 9.9 200 179-423 67-276 (287)
98 4fr4_A YANK1, serine/threonine 100.0 8.2E-36 2.8E-40 287.9 11.2 191 179-412 72-271 (384)
99 1mqb_A Ephrin type-A receptor 100.0 5.9E-36 2E-40 284.6 10.0 198 179-420 103-310 (333)
100 2bdw_A Hypothetical protein K1 100.0 7.8E-36 2.7E-40 286.8 10.9 193 179-413 85-285 (362)
101 2jii_A Serine/threonine-protei 100.0 5.8E-36 2E-40 286.9 9.9 215 179-422 99-339 (352)
102 4hgt_A Casein kinase I isoform 100.0 1.3E-35 4.3E-40 277.2 12.0 205 179-422 61-283 (296)
103 2pvf_A Fibroblast growth facto 100.0 7.8E-36 2.7E-40 283.9 10.4 201 180-421 99-320 (334)
104 3kfa_A Tyrosine-protein kinase 100.0 4.3E-36 1.5E-40 279.5 8.4 199 179-420 66-272 (288)
105 3niz_A Rhodanese family protei 100.0 9.6E-36 3.3E-40 280.4 10.9 215 179-412 76-300 (311)
106 2wqm_A Serine/threonine-protei 100.0 6.7E-36 2.3E-40 281.3 9.7 205 179-421 89-299 (310)
107 1qpc_A LCK kinase; alpha beta 100.0 1E-35 3.5E-40 275.7 10.8 199 179-421 65-271 (279)
108 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.2E-36 1.4E-40 287.2 8.3 188 179-412 98-293 (350)
109 3lxp_A Non-receptor tyrosine-p 100.0 3.2E-36 1.1E-40 284.6 7.1 210 179-423 90-314 (318)
110 4fvq_A Tyrosine-protein kinase 100.0 8.6E-37 2.9E-41 284.3 3.2 196 179-419 69-275 (289)
111 4fl3_A Tyrosine-protein kinase 100.0 3.3E-36 1.1E-40 309.1 7.8 197 179-421 427-633 (635)
112 2zv2_A Calcium/calmodulin-depe 100.0 1.3E-35 4.6E-40 277.7 11.2 192 179-413 93-293 (298)
113 2w4o_A Calcium/calmodulin-depe 100.0 8.1E-36 2.8E-40 285.4 9.7 193 179-412 105-305 (349)
114 3kn6_A Ribosomal protein S6 ki 100.0 3.6E-36 1.2E-40 285.1 6.9 196 180-412 64-270 (325)
115 4e5w_A Tyrosine-protein kinase 100.0 2E-36 6.9E-41 283.7 5.1 209 179-418 80-301 (302)
116 4eut_A Serine/threonine-protei 100.0 1.9E-35 6.4E-40 287.8 12.0 230 179-420 64-310 (396)
117 1kob_A Twitchin; kinase, intra 100.0 1.7E-35 5.8E-40 286.5 11.6 194 179-413 105-305 (387)
118 1xbb_A Tyrosine-protein kinase 100.0 7.8E-36 2.7E-40 278.3 8.9 197 179-421 75-281 (291)
119 2x4f_A Myosin light chain kina 100.0 1.4E-35 4.8E-40 286.1 10.5 193 179-412 143-342 (373)
120 2i0e_A Protein kinase C-beta I 100.0 7.4E-36 2.5E-40 285.6 8.5 188 179-412 78-276 (353)
121 1fvr_A Tyrosine-protein kinase 100.0 5.1E-36 1.7E-40 284.3 7.2 201 180-421 84-302 (327)
122 3uzp_A CKI-delta, CKID, casein 100.0 2.4E-35 8.4E-40 275.4 11.7 204 179-421 61-282 (296)
123 2qr7_A Ribosomal protein S6 ki 100.0 4.4E-36 1.5E-40 286.2 6.7 196 179-413 73-278 (342)
124 3gni_B Strad alpha; kinase fol 100.0 1E-35 3.5E-40 289.1 9.3 220 179-413 83-334 (389)
125 2y94_A 5'-AMP-activated protei 100.0 1.9E-35 6.5E-40 292.9 11.3 189 179-413 73-267 (476)
126 3o0g_A Cell division protein k 100.0 2.2E-35 7.6E-40 275.3 11.2 219 179-413 58-283 (292)
127 2r5t_A Serine/threonine-protei 100.0 5.7E-36 2E-40 288.4 7.1 187 179-411 96-288 (373)
128 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-35 4E-40 279.9 9.0 186 179-412 114-304 (311)
129 3lxl_A Tyrosine-protein kinase 100.0 3.4E-36 1.2E-40 285.6 5.3 211 179-420 81-304 (327)
130 2pmi_A Negative RE, cyclin-dep 100.0 8.7E-36 3E-40 281.5 7.8 224 179-413 60-294 (317)
131 2buj_A Serine/threonine-protei 100.0 1.1E-35 3.6E-40 280.8 8.3 206 179-419 83-306 (317)
132 4ejn_A RAC-alpha serine/threon 100.0 9.6E-36 3.3E-40 294.4 8.3 188 179-412 205-404 (446)
133 3ttj_A Mitogen-activated prote 100.0 4.4E-35 1.5E-39 290.4 12.8 224 179-413 118-356 (464)
134 2a19_B Interferon-induced, dou 100.0 1.3E-35 4.3E-40 275.6 8.2 202 179-423 61-278 (284)
135 3uc3_A Serine/threonine-protei 100.0 2.1E-35 7E-40 283.8 9.9 195 179-413 73-275 (361)
136 2h8h_A Proto-oncogene tyrosine 100.0 6E-36 2E-40 302.0 6.2 196 179-418 319-522 (535)
137 3dls_A PAS domain-containing s 100.0 2.7E-35 9.3E-40 280.2 9.9 183 179-413 86-275 (335)
138 3v8s_A RHO-associated protein 100.0 9.5E-36 3.3E-40 289.9 6.9 192 179-413 126-330 (410)
139 1p4o_A Insulin-like growth fac 100.0 9.5E-36 3.2E-40 281.7 6.6 199 179-418 85-298 (322)
140 3i6u_A CDS1, serine/threonine- 100.0 5.7E-35 1.9E-39 286.3 12.4 193 179-413 197-400 (419)
141 3fdn_A Serine/threonine-protei 100.0 2.8E-35 9.4E-40 272.8 9.6 189 179-413 66-258 (279)
142 2yex_A Serine/threonine-protei 100.0 5E-35 1.7E-39 270.5 11.2 192 179-413 62-262 (276)
143 2w1i_A JAK2; chromosomal rearr 100.0 9.6E-36 3.3E-40 282.3 6.6 210 179-422 99-325 (326)
144 3ork_A Serine/threonine protei 100.0 3E-36 1E-40 283.9 3.0 201 179-417 69-279 (311)
145 1ob3_A PFPK5, cell division co 100.0 2.7E-35 9.1E-40 274.3 9.4 218 179-413 57-281 (288)
146 3rp9_A Mitogen-activated prote 100.0 2.9E-35 9.9E-40 292.0 10.0 138 179-324 109-280 (458)
147 3a62_A Ribosomal protein S6 ki 100.0 1.8E-35 6.2E-40 280.5 8.2 188 179-412 78-276 (327)
148 3fme_A Dual specificity mitoge 100.0 8.2E-36 2.8E-40 277.8 5.2 194 179-412 63-266 (290)
149 1x8b_A WEE1HU, WEE1-like prote 100.0 1.8E-35 6.1E-40 274.9 7.3 190 180-413 69-280 (289)
150 1t4h_A Serine/threonine-protei 100.0 7.7E-35 2.6E-39 271.4 11.6 195 179-413 82-283 (290)
151 4aw2_A Serine/threonine-protei 100.0 4.2E-35 1.4E-39 287.6 10.3 195 179-413 131-339 (437)
152 3byv_A Rhoptry kinase; malaria 100.0 1.5E-35 5.1E-40 286.7 6.8 200 179-421 133-370 (377)
153 3oz6_A Mitogen-activated prote 100.0 1.6E-35 5.4E-40 287.6 6.7 140 180-331 67-234 (388)
154 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.6E-35 1.2E-39 282.8 9.1 195 180-420 125-340 (365)
155 3q60_A ROP5B; pseudokinase, tr 100.0 3.7E-36 1.3E-40 290.4 2.1 180 201-412 162-352 (371)
156 3is5_A Calcium-dependent prote 100.0 5.5E-35 1.9E-39 271.8 10.0 194 179-412 77-278 (285)
157 3mtl_A Cell division protein k 100.0 2.3E-35 7.9E-40 279.5 7.5 218 179-412 57-281 (324)
158 1u46_A ACK-1, activated CDC42 100.0 1.1E-35 3.7E-40 277.1 5.0 198 179-420 78-285 (291)
159 2acx_A G protein-coupled recep 100.0 2.7E-35 9.2E-40 296.1 8.1 195 179-413 241-445 (576)
160 3lm5_A Serine/threonine-protei 100.0 6.7E-35 2.3E-39 276.6 10.4 195 179-413 86-288 (327)
161 2ac3_A MAP kinase-interacting 100.0 3.3E-35 1.1E-39 277.3 8.1 208 179-413 68-296 (316)
162 3qd2_B Eukaryotic translation 100.0 3.8E-35 1.3E-39 278.5 8.5 174 201-413 135-326 (332)
163 2eue_A Carbon catabolite derep 100.0 2.7E-35 9.2E-40 272.3 7.3 188 179-413 70-263 (275)
164 3cok_A Serine/threonine-protei 100.0 3.5E-35 1.2E-39 271.9 7.9 189 179-412 68-262 (278)
165 3an0_A Dual specificity mitoge 100.0 1.2E-35 4.2E-40 283.2 4.8 195 179-413 107-311 (340)
166 1u5q_A Serine/threonine protei 100.0 1.6E-35 5.4E-40 283.1 5.5 191 179-413 111-306 (348)
167 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.1E-35 1.4E-39 293.9 8.7 196 179-412 242-448 (543)
168 2j0j_A Focal adhesion kinase 1 100.0 5.8E-35 2E-39 300.9 9.8 197 179-420 448-652 (656)
169 2h34_A Serine/threonine-protei 100.0 7E-35 2.4E-39 274.3 9.6 198 179-419 91-296 (309)
170 2a2a_A Death-associated protei 100.0 1.2E-34 4.2E-39 274.1 11.2 193 179-413 72-273 (321)
171 2w5a_A Serine/threonine-protei 100.0 1.1E-35 3.8E-40 275.4 3.9 197 179-414 62-269 (279)
172 3nsz_A CK II alpha, casein kin 100.0 5.9E-35 2E-39 277.2 8.9 221 180-413 89-320 (330)
173 1cm8_A Phosphorylated MAP kina 100.0 8.8E-35 3E-39 280.1 10.2 221 179-413 81-308 (367)
174 3mi9_A Cell division protein k 100.0 1.1E-34 3.8E-39 277.9 10.7 226 179-413 73-312 (351)
175 2vd5_A DMPK protein; serine/th 100.0 5.5E-35 1.9E-39 284.8 8.7 193 179-412 118-327 (412)
176 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.6E-35 8.8E-40 278.3 6.1 199 179-421 86-304 (319)
177 3hko_A Calcium/calmodulin-depe 100.0 9.4E-35 3.2E-39 277.6 10.0 197 179-413 85-331 (345)
178 1wak_A Serine/threonine-protei 100.0 1.1E-34 3.6E-39 282.4 10.5 228 179-413 98-392 (397)
179 2zmd_A Dual specificity protei 100.0 7.6E-35 2.6E-39 282.8 9.3 189 180-413 114-321 (390)
180 3kvw_A DYRK2, dual specificity 100.0 3.7E-35 1.2E-39 288.5 7.0 143 178-331 155-302 (429)
181 2yfx_A Tyrosine-protein kinase 100.0 3.5E-35 1.2E-39 278.5 6.6 201 179-420 90-305 (327)
182 3kk8_A Calcium/calmodulin depe 100.0 1.2E-34 4.1E-39 269.1 10.0 193 179-413 62-262 (284)
183 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-34 3.6E-39 268.5 9.5 192 179-413 63-262 (277)
184 2vgo_A Serine/threonine-protei 100.0 1.2E-34 4.2E-39 269.1 9.6 189 179-413 71-263 (284)
185 4agu_A Cyclin-dependent kinase 100.0 5.5E-35 1.9E-39 275.1 7.2 215 179-413 59-285 (311)
186 3eb0_A Putative uncharacterize 100.0 9.6E-35 3.3E-39 281.6 8.9 223 179-412 57-321 (383)
187 4e7w_A Glycogen synthase kinas 100.0 1E-34 3.5E-39 282.3 8.9 224 179-413 89-322 (394)
188 3ll6_A Cyclin G-associated kin 100.0 1.5E-34 5E-39 275.0 9.7 200 180-420 84-309 (337)
189 3n9x_A Phosphotransferase; mal 100.0 1.9E-34 6.6E-39 283.7 10.5 143 179-329 82-253 (432)
190 3pfq_A PKC-B, PKC-beta, protei 100.0 1.1E-34 3.8E-39 299.7 9.2 188 179-412 399-597 (674)
191 3dbq_A Dual specificity protei 100.0 7.1E-35 2.4E-39 278.3 7.1 188 181-413 68-274 (343)
192 1vzo_A Ribosomal protein S6 ki 100.0 1E-34 3.6E-39 278.4 7.7 193 180-414 117-323 (355)
193 3mwu_A Calmodulin-domain prote 100.0 3.6E-34 1.2E-38 286.2 11.8 191 179-413 78-277 (486)
194 3sv0_A Casein kinase I-like; t 100.0 3E-34 1E-38 284.8 10.9 189 199-420 75-279 (483)
195 2fst_X Mitogen-activated prote 100.0 1.3E-34 4.3E-39 278.8 7.9 223 179-413 85-312 (367)
196 3qyz_A Mitogen-activated prote 100.0 2.3E-34 7.8E-39 277.1 9.2 219 179-412 82-313 (364)
197 3nyv_A Calmodulin-domain prote 100.0 1.6E-34 5.6E-39 288.6 8.4 191 179-413 83-282 (484)
198 2y7j_A Phosphorylase B kinase 100.0 3.6E-34 1.2E-38 275.7 10.4 192 180-413 158-360 (365)
199 1blx_A Cyclin-dependent kinase 100.0 7.9E-34 2.7E-38 268.9 12.5 220 180-412 72-296 (326)
200 3eqc_A Dual specificity mitoge 100.0 1.4E-34 4.9E-39 278.0 7.5 221 179-413 88-325 (360)
201 2ycf_A Serine/threonine-protei 100.0 3.3E-34 1.1E-38 271.3 9.8 192 179-412 72-274 (322)
202 3bhy_A Death-associated protei 100.0 3.9E-34 1.3E-38 265.5 10.1 193 179-413 65-266 (283)
203 2pml_X PFPK7, Ser/Thr protein 100.0 3.1E-34 1.1E-38 274.3 9.6 210 179-412 100-322 (348)
204 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.5E-34 5E-39 274.6 7.3 217 179-412 90-318 (329)
205 2jam_A Calcium/calmodulin-depe 100.0 4.1E-34 1.4E-38 268.4 10.2 193 179-413 63-262 (304)
206 2owb_A Serine/threonine-protei 100.0 1.4E-34 4.9E-39 275.3 7.2 189 179-413 98-292 (335)
207 2xrw_A Mitogen-activated prote 100.0 7.4E-34 2.5E-38 274.2 12.3 224 179-413 81-319 (371)
208 2h6d_A 5'-AMP-activated protei 100.0 2.3E-34 7.8E-39 266.1 8.3 189 179-413 68-262 (276)
209 3lij_A Calcium/calmodulin depe 100.0 4.2E-34 1.4E-38 286.2 10.7 192 179-413 93-292 (494)
210 1j1b_A Glycogen synthase kinas 100.0 2.2E-34 7.4E-39 282.3 8.4 223 179-413 104-337 (420)
211 2rku_A Serine/threonine-protei 100.0 1.9E-34 6.4E-39 269.3 7.6 189 179-413 72-266 (294)
212 1z57_A Dual specificity protei 100.0 5.1E-34 1.7E-38 271.4 10.7 222 179-413 74-329 (339)
213 2clq_A Mitogen-activated prote 100.0 1.3E-34 4.3E-39 270.4 6.2 194 179-412 76-278 (295)
214 2vx3_A Dual specificity tyrosi 100.0 8.6E-34 2.9E-38 274.8 12.1 143 180-331 114-261 (382)
215 3a7i_A MST3 kinase, serine/thr 100.0 7E-34 2.4E-38 266.6 11.1 190 179-414 77-272 (303)
216 3pg1_A Mitogen-activated prote 100.0 1.3E-34 4.3E-39 278.6 6.0 215 179-413 86-317 (362)
217 3fhr_A MAP kinase-activated pr 100.0 1.7E-34 6E-39 274.8 6.9 203 179-413 79-288 (336)
218 3com_A Serine/threonine-protei 100.0 4.8E-34 1.6E-38 269.0 9.5 192 179-412 81-278 (314)
219 1ua2_A CAK, cell division prot 100.0 7.9E-34 2.7E-38 271.4 10.8 217 179-413 69-292 (346)
220 2vwi_A Serine/threonine-protei 100.0 2.1E-34 7.3E-39 269.8 6.7 203 179-413 70-288 (303)
221 2b9h_A MAP kinase FUS3, mitoge 100.0 3.5E-34 1.2E-38 274.5 8.2 224 179-413 66-306 (353)
222 3rgf_A Cyclin-dependent kinase 100.0 5.4E-34 1.9E-38 278.4 9.5 146 179-331 75-239 (405)
223 3q5i_A Protein kinase; CDPK, m 100.0 5.8E-34 2E-38 285.9 9.9 192 179-413 103-302 (504)
224 4aaa_A Cyclin-dependent kinase 100.0 1.1E-34 3.7E-39 275.7 4.2 218 179-413 81-307 (331)
225 3e3p_A Protein kinase, putativ 100.0 4E-34 1.4E-38 274.8 8.1 228 179-413 76-315 (360)
226 2x7f_A TRAF2 and NCK-interacti 100.0 2.6E-34 8.7E-39 272.4 6.0 197 180-413 79-287 (326)
227 2r3i_A Cell division protein k 100.0 4.5E-34 1.5E-38 267.3 6.4 215 179-412 59-283 (299)
228 1q8y_A SR protein kinase; tran 100.0 7.2E-34 2.4E-38 274.3 7.9 228 179-413 83-334 (373)
229 1phk_A Phosphorylase kinase; g 100.0 1.4E-33 4.9E-38 263.7 9.6 191 180-412 82-283 (298)
230 2j7t_A Serine/threonine-protei 100.0 4.6E-34 1.6E-38 267.6 6.3 192 179-412 73-275 (302)
231 2rio_A Serine/threonine-protei 100.0 7.7E-34 2.6E-38 279.6 7.7 196 179-412 66-295 (434)
232 2wtk_C Serine/threonine-protei 100.0 2E-33 7E-38 263.6 9.6 192 179-413 63-264 (305)
233 4exu_A Mitogen-activated prote 100.0 1.1E-33 3.9E-38 272.9 7.7 220 179-413 98-324 (371)
234 2eu9_A Dual specificity protei 100.0 5.6E-33 1.9E-37 266.0 11.7 219 181-412 81-333 (355)
235 3p23_A Serine/threonine-protei 100.0 2E-33 6.7E-38 276.1 8.5 190 180-412 76-283 (432)
236 3coi_A Mitogen-activated prote 100.0 7.4E-33 2.5E-37 265.4 11.4 220 179-413 80-306 (353)
237 3a99_A Proto-oncogene serine/t 100.0 1.6E-33 5.6E-38 266.2 6.2 182 180-413 106-294 (320)
238 3aln_A Dual specificity mitoge 100.0 8.3E-34 2.8E-38 269.0 3.3 198 179-413 78-286 (327)
239 3cek_A Dual specificity protei 100.0 4.8E-33 1.7E-37 262.1 8.4 188 181-413 87-293 (313)
240 2wei_A Calmodulin-domain prote 100.0 6.9E-33 2.4E-37 257.8 8.7 192 179-413 78-277 (287)
241 1zy4_A Serine/threonine-protei 100.0 2.9E-33 1E-37 261.9 6.2 197 179-413 59-284 (303)
242 2dyl_A Dual specificity mitoge 100.0 2E-33 7E-38 265.1 4.8 193 179-413 81-284 (318)
243 2iwi_A Serine/threonine-protei 100.0 6.7E-33 2.3E-37 261.0 7.5 182 180-413 96-284 (312)
244 2i6l_A Mitogen-activated prote 100.0 4.8E-33 1.7E-37 262.6 6.4 215 179-413 65-306 (320)
245 3qa8_A MGC80376 protein; kinas 100.0 1.2E-31 4.2E-36 272.3 13.0 225 179-418 69-308 (676)
246 2pzi_A Probable serine/threoni 100.0 7.4E-32 2.5E-36 280.0 10.8 192 179-421 136-330 (681)
247 3m2w_A MAP kinase-activated pr 100.0 1.1E-31 3.8E-36 251.2 7.8 187 179-413 68-257 (299)
248 3dzo_A Rhoptry kinase domain; 100.0 1.7E-31 5.7E-36 261.2 8.5 177 201-420 179-373 (413)
249 3uqc_A Probable conserved tran 100.0 1.1E-30 3.9E-35 242.7 6.3 179 179-420 88-266 (286)
250 2vuw_A Serine/threonine-protei 100.0 1.4E-30 4.7E-35 247.9 4.7 193 180-411 107-329 (336)
251 3rgz_A Protein brassinosteroid 99.9 1.1E-27 3.9E-32 252.0 15.9 178 2-180 471-718 (768)
252 1ogq_A PGIP-2, polygalacturona 99.9 1.8E-27 6.2E-32 224.0 14.4 178 1-180 54-235 (313)
253 1ogq_A PGIP-2, polygalacturona 99.9 5.2E-27 1.8E-31 220.8 13.4 195 1-198 80-277 (313)
254 3rgz_A Protein brassinosteroid 99.9 1.8E-26 6.2E-31 242.9 16.0 177 2-179 447-693 (768)
255 4azs_A Methyltransferase WBDD; 99.9 3.4E-28 1.1E-32 246.2 -1.3 133 179-327 299-437 (569)
256 4fcg_A Uncharacterized protein 99.9 7E-26 2.4E-30 214.4 13.9 174 1-180 85-267 (328)
257 4fcg_A Uncharacterized protein 99.9 3.1E-25 1.1E-29 210.0 14.2 175 1-180 108-291 (328)
258 1ozn_A Reticulon 4 receptor; N 99.9 4E-25 1.4E-29 205.1 14.4 181 1-182 36-217 (285)
259 1ozn_A Reticulon 4 receptor; N 99.9 2.2E-24 7.4E-29 200.2 17.6 176 2-181 16-192 (285)
260 4eco_A Uncharacterized protein 99.9 2.1E-25 7.1E-30 229.8 9.8 144 32-179 194-366 (636)
261 3m19_A Variable lymphocyte rec 99.9 3.5E-24 1.2E-28 195.0 16.6 176 2-181 19-194 (251)
262 2o6q_A Variable lymphocyte rec 99.9 9.4E-24 3.2E-28 194.3 17.0 176 2-182 21-197 (270)
263 1p9a_G Platelet glycoprotein I 99.9 1.8E-23 6.3E-28 194.3 15.7 175 2-183 15-189 (290)
264 4ecn_A Leucine-rich repeat pro 99.9 1.3E-24 4.4E-29 228.7 8.4 139 37-179 440-608 (876)
265 4eco_A Uncharacterized protein 99.9 2.2E-24 7.5E-29 222.1 9.7 174 6-184 192-395 (636)
266 2z66_A Variable lymphocyte rec 99.9 1.7E-23 5.7E-28 196.2 14.7 175 2-178 57-235 (306)
267 1p9a_G Platelet glycoprotein I 99.9 6.1E-23 2.1E-27 190.7 16.9 173 1-178 35-207 (290)
268 3rfs_A Internalin B, repeat mo 99.9 6.3E-23 2.2E-27 189.0 16.5 174 2-180 46-219 (272)
269 2o6q_A Variable lymphocyte rec 99.9 1E-22 3.6E-27 187.3 18.0 177 1-179 41-218 (270)
270 2z62_A TOLL-like receptor 4, v 99.9 5.2E-23 1.8E-27 189.9 15.7 180 1-182 32-216 (276)
271 2z66_A Variable lymphocyte rec 99.9 5.1E-23 1.7E-27 192.9 15.4 180 1-182 32-215 (306)
272 3v47_A TOLL-like receptor 5B a 99.9 6.7E-23 2.3E-27 202.8 14.1 60 119-178 276-335 (455)
273 1wwl_A Monocyte differentiatio 99.9 1.2E-23 4.1E-28 197.8 8.0 159 19-179 93-266 (312)
274 3zyi_A Leucine-rich repeat-con 99.9 1.4E-22 4.8E-27 200.4 16.0 176 1-179 79-255 (452)
275 2ft3_A Biglycan; proteoglycan, 99.9 2.5E-22 8.4E-27 190.5 17.1 175 1-179 58-254 (332)
276 3m19_A Variable lymphocyte rec 99.9 1.5E-22 5.3E-27 184.1 14.7 156 1-157 39-194 (251)
277 4ecn_A Leucine-rich repeat pro 99.9 1.7E-23 6E-28 220.1 9.5 175 5-185 433-638 (876)
278 3v47_A TOLL-like receptor 5B a 99.9 1.5E-22 5.1E-27 200.3 15.4 113 69-182 275-387 (455)
279 2z62_A TOLL-like receptor 4, v 99.9 9.5E-23 3.2E-27 188.2 12.6 178 1-180 56-238 (276)
280 3vq2_A TLR4, TOLL-like recepto 99.9 9.9E-23 3.4E-27 208.9 13.5 179 2-182 355-537 (606)
281 2xwt_C Thyrotropin receptor; s 99.9 1.3E-22 4.3E-27 183.2 12.4 178 1-182 35-221 (239)
282 2id5_A Lingo-1, leucine rich r 99.9 1.4E-22 4.9E-27 201.7 14.0 177 1-179 36-213 (477)
283 1xku_A Decorin; proteoglycan, 99.9 6.1E-22 2.1E-26 187.6 17.6 175 1-179 56-253 (330)
284 3zyj_A Leucine-rich repeat-con 99.9 3.7E-22 1.3E-26 196.7 16.1 176 1-179 68-244 (440)
285 1wwl_A Monocyte differentiatio 99.9 3.6E-23 1.2E-27 194.5 7.6 178 1-183 99-291 (312)
286 3zyi_A Leucine-rich repeat-con 99.9 2.9E-22 9.8E-27 198.2 14.4 179 1-182 103-282 (452)
287 3oja_B Anopheles plasmodium-re 99.9 3.4E-22 1.2E-26 204.4 15.4 104 2-107 80-184 (597)
288 3zyj_A Leucine-rich repeat-con 99.9 5.6E-22 1.9E-26 195.4 15.7 179 1-182 92-271 (440)
289 3rfs_A Internalin B, repeat mo 99.9 3.3E-22 1.1E-26 184.2 12.2 169 1-179 67-235 (272)
290 3oja_A Leucine-rich immune mol 99.9 1.7E-22 5.9E-27 201.3 10.6 168 1-181 38-206 (487)
291 3oja_B Anopheles plasmodium-re 99.9 4.7E-22 1.6E-26 203.4 14.1 130 2-132 56-185 (597)
292 2v70_A SLIT-2, SLIT homolog 2 99.9 1.1E-21 3.9E-26 174.6 14.5 152 2-157 16-168 (220)
293 4glp_A Monocyte differentiatio 99.9 3.6E-22 1.2E-26 187.5 11.7 177 1-182 95-288 (310)
294 3t6q_A CD180 antigen; protein- 99.9 1.1E-21 3.7E-26 201.2 15.9 179 1-180 329-514 (606)
295 2v9t_B SLIT homolog 2 protein 99.9 1.8E-21 6.1E-26 173.3 14.9 150 2-155 16-165 (220)
296 2ft3_A Biglycan; proteoglycan, 99.9 1.8E-21 6.3E-26 184.5 15.6 176 1-181 82-279 (332)
297 3o6n_A APL1; leucine-rich repe 99.9 2E-21 6.7E-26 188.4 16.0 104 2-107 74-178 (390)
298 2o6s_A Variable lymphocyte rec 99.9 8E-22 2.7E-26 174.0 12.1 167 2-179 12-178 (208)
299 2id5_A Lingo-1, leucine rich r 99.9 1.2E-21 4.2E-26 195.0 14.8 178 1-179 132-333 (477)
300 3vq2_A TLR4, TOLL-like recepto 99.9 7E-22 2.4E-26 202.6 13.4 176 1-178 36-216 (606)
301 3t6q_A CD180 antigen; protein- 99.9 6.2E-22 2.1E-26 203.0 12.9 179 1-181 354-538 (606)
302 2z80_A TOLL-like receptor 2, v 99.9 1.9E-22 6.3E-27 193.0 7.9 176 2-182 36-214 (353)
303 3o6n_A APL1; leucine-rich repe 99.9 2E-21 6.7E-26 188.4 14.4 131 1-132 49-179 (390)
304 4glp_A Monocyte differentiatio 99.9 7.3E-22 2.5E-26 185.4 10.4 173 1-180 121-308 (310)
305 2z7x_B TOLL-like receptor 1, v 99.9 7.6E-22 2.6E-26 198.6 11.1 175 2-182 252-460 (520)
306 2z63_A TOLL-like receptor 4, v 99.9 1.2E-21 4.2E-26 199.2 12.2 173 2-178 330-506 (570)
307 3j0a_A TOLL-like receptor 5; m 99.9 2.7E-21 9.2E-26 205.5 14.9 177 1-178 28-216 (844)
308 1xku_A Decorin; proteoglycan, 99.9 5.8E-21 2E-25 180.9 15.6 173 1-181 104-278 (330)
309 2xot_A Amphoterin-induced prot 99.9 1.7E-21 5.7E-26 186.9 11.3 173 2-179 23-202 (361)
310 2z7x_B TOLL-like receptor 1, v 99.9 2.3E-21 7.7E-26 195.2 12.8 102 2-107 26-128 (520)
311 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 2E-21 7E-26 197.4 12.3 174 1-180 280-487 (562)
312 2z81_A CD282 antigen, TOLL-lik 99.8 5E-22 1.7E-26 201.3 7.4 170 3-176 11-182 (549)
313 3e6j_A Variable lymphocyte rec 99.8 7.8E-21 2.7E-25 170.3 14.2 147 3-155 25-172 (229)
314 2z80_A TOLL-like receptor 2, v 99.8 3.8E-21 1.3E-25 183.9 12.8 179 1-181 56-237 (353)
315 2v70_A SLIT-2, SLIT homolog 2 99.8 7.5E-21 2.6E-25 169.3 13.8 158 23-184 13-171 (220)
316 2v9t_B SLIT homolog 2 protein 99.8 1.8E-20 6.2E-25 166.8 15.6 155 23-181 13-167 (220)
317 2z81_A CD282 antigen, TOLL-lik 99.8 3.5E-21 1.2E-25 195.0 12.1 179 1-180 30-210 (549)
318 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 5.8E-21 2E-25 194.1 13.6 103 2-108 57-160 (562)
319 1ziw_A TOLL-like receptor 3; i 99.8 5.3E-21 1.8E-25 198.8 13.5 170 1-172 29-201 (680)
320 2o6s_A Variable lymphocyte rec 99.8 8.2E-21 2.8E-25 167.5 12.6 158 2-167 33-190 (208)
321 1ziw_A TOLL-like receptor 3; i 99.8 2.9E-20 1E-24 193.2 18.7 178 2-180 386-574 (680)
322 3oja_A Leucine-rich immune mol 99.8 2.6E-21 8.8E-26 192.8 9.5 170 1-184 62-232 (487)
323 3o53_A Protein LRIM1, AGAP0063 99.8 3.5E-21 1.2E-25 181.4 9.6 169 1-182 38-207 (317)
324 2z63_A TOLL-like receptor 4, v 99.8 8.1E-21 2.8E-25 193.1 13.0 173 2-176 33-210 (570)
325 1h6u_A Internalin H; cell adhe 99.8 1E-20 3.5E-25 177.3 11.6 167 1-182 45-211 (308)
326 2xwt_C Thyrotropin receptor; s 99.8 1.6E-20 5.3E-25 169.5 12.0 169 1-176 59-236 (239)
327 3e6j_A Variable lymphocyte rec 99.8 4.4E-20 1.5E-24 165.4 14.8 154 23-181 21-174 (229)
328 1h6u_A Internalin H; cell adhe 99.8 2.5E-20 8.6E-25 174.7 13.4 148 19-179 39-186 (308)
329 4ezg_A Putative uncharacterize 99.8 2.3E-20 7.9E-25 163.2 11.9 155 16-179 39-194 (197)
330 4g8a_A TOLL-like receptor 4; l 99.8 3.2E-20 1.1E-24 190.9 14.0 157 7-167 41-198 (635)
331 3j0a_A TOLL-like receptor 5; m 99.8 4.7E-20 1.6E-24 196.0 15.4 174 2-180 9-188 (844)
332 1h6t_A Internalin B; cell adhe 99.8 2.8E-20 9.4E-25 172.9 12.0 166 1-181 50-215 (291)
333 4g8a_A TOLL-like receptor 4; l 99.8 2.2E-20 7.6E-25 192.1 12.4 174 1-176 56-234 (635)
334 4ezg_A Putative uncharacterize 99.8 2E-20 7E-25 163.6 9.1 148 1-156 48-195 (197)
335 3en9_A Glycoprotease, O-sialog 99.8 1.6E-21 5.6E-26 196.1 2.3 129 179-329 396-539 (540)
336 3o53_A Protein LRIM1, AGAP0063 99.8 2.2E-20 7.6E-25 175.8 9.2 168 1-182 62-230 (317)
337 1xeu_A Internalin C; cellular 99.8 3.6E-20 1.2E-24 169.5 9.8 165 2-182 24-188 (263)
338 1m9s_A Internalin B; cell inva 99.8 1.1E-19 3.9E-24 184.8 13.7 166 1-181 47-212 (605)
339 2xot_A Amphoterin-induced prot 99.8 7.4E-20 2.5E-24 175.4 11.2 154 1-156 43-203 (361)
340 3cvr_A Invasion plasmid antige 99.8 4E-19 1.4E-23 178.9 15.8 153 2-178 64-242 (571)
341 3cvr_A Invasion plasmid antige 99.8 3.2E-19 1.1E-23 179.7 14.5 144 2-167 105-255 (571)
342 1w8a_A SLIT protein; signaling 99.8 2.6E-19 8.7E-24 155.9 11.8 130 2-135 13-143 (192)
343 4fmz_A Internalin; leucine ric 99.8 3.1E-19 1.1E-23 170.0 11.3 170 1-183 159-328 (347)
344 4b8c_D Glucose-repressible alc 99.8 7.6E-20 2.6E-24 190.5 6.7 153 5-163 209-362 (727)
345 3bz5_A Internalin-J, INLJ; leu 99.8 2.2E-18 7.4E-23 170.2 16.6 160 2-180 47-226 (457)
346 1o6v_A Internalin A; bacterial 99.8 7.3E-19 2.5E-23 174.4 12.8 167 1-182 203-369 (466)
347 4fmz_A Internalin; leucine ric 99.8 1.1E-18 3.9E-23 166.1 13.2 166 1-180 136-301 (347)
348 1dce_A Protein (RAB geranylger 99.8 3.1E-21 1.1E-25 195.1 -6.0 174 2-183 354-550 (567)
349 1o6v_A Internalin A; bacterial 99.8 1.2E-18 4E-23 172.9 12.6 167 1-182 181-347 (466)
350 3bz5_A Internalin-J, INLJ; leu 99.8 4.1E-18 1.4E-22 168.3 15.9 160 2-182 69-249 (457)
351 2ast_B S-phase kinase-associat 99.8 1.9E-20 6.5E-25 177.6 -1.1 174 2-177 75-258 (336)
352 1w8a_A SLIT protein; signaling 99.8 1.4E-18 4.7E-23 151.2 10.7 130 24-157 11-141 (192)
353 1h6t_A Internalin B; cell adhe 99.8 1.5E-18 5.1E-23 161.2 11.7 144 1-157 72-215 (291)
354 2ast_B S-phase kinase-associat 99.8 2.3E-20 7.8E-25 177.1 -0.8 175 1-176 97-282 (336)
355 4ay9_X Follicle-stimulating ho 99.8 1.9E-18 6.4E-23 164.9 12.4 179 2-182 35-218 (350)
356 1jl5_A Outer protein YOPM; leu 99.8 4.8E-19 1.6E-23 174.8 8.6 167 1-182 15-211 (454)
357 1xeu_A Internalin C; cellular 99.8 2.2E-18 7.6E-23 157.6 12.4 143 1-157 45-187 (263)
358 2wfh_A SLIT homolog 2 protein 99.8 4E-18 1.4E-22 148.3 12.9 127 24-155 13-139 (193)
359 2ell_A Acidic leucine-rich nuc 99.8 2.2E-18 7.6E-23 146.5 10.6 137 18-160 21-164 (168)
360 2ca6_A RAN GTPase-activating p 99.8 1.4E-20 4.9E-25 182.1 -4.1 179 1-180 64-288 (386)
361 2ca6_A RAN GTPase-activating p 99.7 3.7E-20 1.3E-24 179.2 -2.3 179 1-180 36-258 (386)
362 2ell_A Acidic leucine-rich nuc 99.7 1.2E-18 4.3E-23 148.1 7.0 134 1-138 28-166 (168)
363 1m9s_A Internalin B; cell inva 99.7 8.3E-18 2.9E-22 171.0 12.7 148 1-161 69-216 (605)
364 3goz_A Leucine-rich repeat-con 99.7 9.7E-20 3.3E-24 174.7 -1.6 178 2-180 3-210 (362)
365 4b8c_D Glucose-repressible alc 99.7 2.9E-19 9.9E-24 186.1 1.8 167 1-178 228-403 (727)
366 3goz_A Leucine-rich repeat-con 99.7 1.3E-19 4.3E-24 173.9 -1.5 180 1-181 26-240 (362)
367 2o6r_A Variable lymphocyte rec 99.7 1.7E-17 5.9E-22 142.2 12.0 126 2-131 12-137 (177)
368 2wfh_A SLIT homolog 2 protein 99.7 1.6E-17 5.3E-22 144.6 11.8 125 2-131 15-139 (193)
369 1jl5_A Outer protein YOPM; leu 99.7 4E-17 1.4E-21 161.0 16.0 158 2-182 96-253 (454)
370 2je0_A Acidic leucine-rich nuc 99.7 2E-18 6.8E-23 143.7 5.6 128 20-150 16-148 (149)
371 1dce_A Protein (RAB geranylger 99.7 5E-19 1.7E-23 178.9 1.4 158 9-173 397-567 (567)
372 3g06_A SSPH2 (leucine-rich rep 99.7 8.8E-17 3E-21 163.8 17.4 69 2-82 66-134 (622)
373 3g06_A SSPH2 (leucine-rich rep 99.7 6.3E-17 2.2E-21 164.9 15.7 74 97-179 224-297 (622)
374 2o6r_A Variable lymphocyte rec 99.7 7.9E-17 2.7E-21 138.1 11.7 131 23-157 9-139 (177)
375 2je0_A Acidic leucine-rich nuc 99.7 1.3E-17 4.6E-22 138.7 6.3 129 43-174 15-148 (149)
376 1a9n_A U2A', U2A'; complex (nu 99.7 3.2E-17 1.1E-21 140.5 8.4 135 15-156 13-154 (176)
377 1ds9_A Outer arm dynein; leuci 99.7 2E-19 6.9E-24 157.3 -5.6 147 19-172 16-180 (198)
378 1ds9_A Outer arm dynein; leuci 99.6 8.4E-19 2.9E-23 153.4 -7.1 145 2-155 23-185 (198)
379 4ay9_X Follicle-stimulating ho 99.6 3.2E-16 1.1E-20 149.4 10.1 170 1-172 58-232 (350)
380 1z7x_W Ribonuclease inhibitor; 99.6 2.5E-18 8.5E-23 170.2 -6.8 176 2-178 175-382 (461)
381 1zar_A RIO2 kinase; serine kin 99.6 1.1E-16 3.7E-21 147.8 2.7 92 200-313 173-274 (282)
382 1z7x_W Ribonuclease inhibitor; 99.6 1.4E-17 4.7E-22 164.8 -4.5 177 2-179 61-269 (461)
383 1a9n_A U2A', U2A'; complex (nu 99.6 6.5E-16 2.2E-20 132.2 6.1 143 28-179 4-153 (176)
384 3g39_A Variable lymphocyte rec 99.6 2.7E-15 9.1E-20 127.6 9.8 107 22-132 10-116 (170)
385 2r9u_A Variable lymphocyte rec 99.6 3.4E-15 1.2E-19 127.4 10.3 104 24-131 15-118 (174)
386 3g39_A Variable lymphocyte rec 99.6 4.5E-15 1.5E-19 126.2 10.7 108 46-157 10-117 (170)
387 2r9u_A Variable lymphocyte rec 99.6 4E-15 1.4E-19 127.0 9.8 102 1-107 16-118 (174)
388 2ifg_A High affinity nerve gro 99.5 7.9E-14 2.7E-18 132.6 10.5 101 2-106 13-115 (347)
389 3sb4_A Hypothetical leucine ri 99.4 3.7E-13 1.3E-17 127.0 11.9 155 20-178 100-309 (329)
390 2ifg_A High affinity nerve gro 99.4 3.9E-13 1.3E-17 127.7 9.6 105 24-132 11-117 (347)
391 3sb4_A Hypothetical leucine ri 99.3 5.9E-12 2E-16 118.7 12.3 152 20-175 48-283 (329)
392 3un9_A NLR family member X1; l 99.3 1.3E-14 4.4E-19 139.0 -7.5 160 20-180 71-253 (372)
393 3un9_A NLR family member X1; l 99.3 1.9E-14 6.4E-19 137.9 -7.2 161 1-162 76-259 (372)
394 1zth_A RIO1 serine protein kin 99.3 1.8E-12 6.2E-17 117.8 5.4 77 201-284 142-219 (258)
395 3ogk_B Coronatine-insensitive 99.3 3E-13 1E-17 137.9 -0.3 151 2-155 143-306 (592)
396 3ogk_B Coronatine-insensitive 99.2 1.1E-12 3.8E-17 133.7 1.3 131 19-151 110-252 (592)
397 4gyi_A RIO2 kinase; protein ki 99.1 2.8E-11 9.7E-16 114.9 3.1 93 180-285 163-266 (397)
398 2p1m_B Transport inhibitor res 99.1 5.4E-12 1.8E-16 128.6 -2.5 128 19-148 103-241 (594)
399 2p1m_B Transport inhibitor res 99.0 2.3E-12 7.7E-17 131.4 -7.2 173 2-178 294-493 (594)
400 4fdw_A Leucine rich hypothetic 99.0 2.8E-09 9.4E-14 103.0 13.1 160 8-174 167-331 (401)
401 4fdw_A Leucine rich hypothetic 99.0 3.4E-09 1.2E-13 102.4 12.5 164 3-175 141-309 (401)
402 2ra8_A Uncharacterized protein 98.8 7.3E-10 2.5E-14 105.2 2.5 160 16-179 134-320 (362)
403 3rw6_A Nuclear RNA export fact 98.8 2.3E-10 7.8E-15 103.4 -2.3 40 43-82 168-209 (267)
404 2ra8_A Uncharacterized protein 98.7 1.3E-09 4.4E-14 103.5 0.3 159 13-177 164-341 (362)
405 3rw6_A Nuclear RNA export fact 98.7 2.7E-09 9.3E-14 96.3 1.9 83 2-86 148-237 (267)
406 1io0_A Tropomodulin; LRR prote 98.5 5.1E-09 1.7E-13 89.8 -1.6 118 17-155 32-164 (185)
407 1io0_A Tropomodulin; LRR prote 98.5 1.1E-08 3.7E-13 87.7 -1.9 122 37-179 28-164 (185)
408 3sg8_A APH(2'')-ID; antibiotic 98.2 1.7E-07 5.9E-12 86.9 1.0 123 201-329 90-288 (304)
409 3tm0_A Aminoglycoside 3'-phosp 98.2 3.5E-07 1.2E-11 82.7 2.5 75 199-282 82-212 (263)
410 3dxp_A Putative acyl-COA dehyd 98.2 2.8E-06 9.5E-11 80.6 7.5 78 201-284 115-249 (359)
411 1nd4_A Aminoglycoside 3'-phosp 98.1 1.5E-06 5.1E-11 78.2 3.6 72 200-283 88-214 (264)
412 4fs7_A Uncharacterized protein 97.8 0.00014 4.6E-09 69.9 12.4 152 15-175 224-375 (394)
413 4fs7_A Uncharacterized protein 97.8 0.00015 5.1E-09 69.5 12.6 153 14-176 201-353 (394)
414 4h09_A Hypothetical leucine ri 97.7 0.00036 1.2E-08 66.4 13.1 149 19-173 192-340 (379)
415 4gt6_A Cell surface protein; l 97.7 0.00017 5.8E-09 69.1 10.2 145 22-176 243-388 (394)
416 3e4g_A ATP synthase subunit S, 97.7 1.4E-05 4.7E-10 67.0 2.1 84 21-105 61-150 (176)
417 4gt6_A Cell surface protein; l 97.6 0.00033 1.1E-08 67.1 11.5 157 14-177 198-368 (394)
418 4h09_A Hypothetical leucine ri 97.6 0.00057 2E-08 65.0 13.1 107 63-173 211-317 (379)
419 3e4g_A ATP synthase subunit S, 97.6 1.3E-05 4.5E-10 67.1 0.6 94 37-131 53-153 (176)
420 3r70_A Aminoglycoside phosphot 97.4 0.00015 5E-09 67.5 5.4 77 201-283 101-237 (320)
421 3rfe_A Platelet glycoprotein I 97.1 0.001 3.5E-08 52.8 6.4 15 116-130 53-67 (130)
422 3rfe_A Platelet glycoprotein I 97.0 0.00068 2.3E-08 53.9 5.0 54 25-81 12-67 (130)
423 3tdw_A Gentamicin resistance p 97.0 0.00074 2.5E-08 62.3 5.4 32 252-283 189-224 (306)
424 2yle_A Protein spire homolog 1 96.9 0.0019 6.5E-08 55.5 7.0 99 213-324 34-132 (229)
425 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00024 8.3E-09 60.5 -1.1 63 20-82 40-111 (197)
426 4gkh_A Aminoglycoside 3'-phosp 96.4 0.0017 5.9E-08 58.4 3.2 29 255-283 195-223 (272)
427 1pgv_A TMD-1, tropomodulin TMD 96.3 0.00047 1.6E-08 58.7 -0.6 81 1-81 45-138 (197)
428 3ats_A Putative uncharacterize 96.3 0.0065 2.2E-07 57.0 7.2 32 252-283 221-252 (357)
429 3ovc_A Hygromycin-B 4-O-kinase 95.9 0.0044 1.5E-07 58.5 3.7 32 253-284 213-244 (362)
430 2q83_A YTAA protein; 2635576, 95.4 0.017 5.7E-07 53.6 5.6 31 252-282 221-251 (346)
431 2pyw_A Uncharacterized protein 94.3 0.04 1.4E-06 52.9 5.2 72 252-324 231-312 (420)
432 3dxq_A Choline/ethanolamine ki 93.5 0.15 5.1E-06 46.4 7.2 30 253-283 173-202 (301)
433 3csv_A Aminoglycoside phosphot 92.0 0.18 6.2E-06 46.5 5.6 32 252-283 182-217 (333)
434 2ppq_A HSK, HK, homoserine kin 91.1 0.064 2.2E-06 49.3 1.4 31 252-282 186-216 (322)
435 1zyl_A Hypothetical protein YI 91.1 0.22 7.4E-06 45.8 5.0 30 252-283 194-223 (328)
436 3g15_A CK, chetk-alpha, cholin 87.5 0.52 1.8E-05 44.8 4.8 29 255-283 246-280 (401)
437 2qg7_A Ethanolamine kinase PV0 86.5 0.61 2.1E-05 45.2 4.7 17 252-268 289-305 (458)
438 2olc_A MTR kinase, methylthior 86.5 0.75 2.6E-05 43.5 5.3 31 252-283 226-256 (397)
439 3i1a_A Spectinomycin phosphotr 86.5 0.28 9.4E-06 45.5 2.2 32 252-283 205-236 (339)
440 3c5i_A Choline kinase; choline 85.4 0.34 1.2E-05 45.4 2.2 30 252-282 211-240 (369)
441 1nw1_A Choline kinase (49.2 KD 84.2 0.51 1.7E-05 45.3 2.9 31 252-282 248-306 (429)
442 3d1u_A Putative fructosamine-3 84.1 0.89 3.1E-05 41.0 4.4 29 252-282 187-215 (288)
443 3feg_A Choline/ethanolamine ki 78.6 0.92 3.2E-05 42.7 2.4 31 252-282 219-253 (379)
444 4ann_A ESSB; membrane protein, 78.3 2.7 9.4E-05 35.8 5.0 86 226-332 76-161 (215)
445 3f2s_A CK, chetk-alpha, cholin 77.6 1.4 4.8E-05 41.7 3.4 31 252-282 243-279 (401)
446 4ano_A ESSB; membrane protein, 70.9 4.3 0.00015 34.7 4.4 83 226-330 80-164 (219)
447 3mes_A Choline kinase; malaria 68.7 2.1 7.3E-05 40.9 2.2 31 252-283 261-291 (424)
448 3jr1_A Putative fructosamine-3 67.9 2.1 7.2E-05 39.0 1.9 27 252-279 206-232 (312)
449 3f7w_A Putative fructosamine-3 61.0 3.2 0.00011 37.1 1.8 41 236-277 170-211 (288)
450 2lz0_A Uncharacterized protein 45.4 31 0.0011 25.1 4.7 40 111-151 13-52 (100)
451 2lz0_A Uncharacterized protein 41.0 29 0.001 25.3 4.0 38 40-78 15-52 (100)
452 3pk1_B Apoptosis regulator BAX 38.3 37 0.0013 19.0 3.0 21 405-425 7-27 (34)
453 4gqc_A Thiol peroxidase, perox 23.5 53 0.0018 26.0 3.1 25 397-421 138-162 (164)
454 2x6h_A GH13170P, VPS34, phosph 20.0 53 0.0018 33.3 2.7 45 231-282 529-575 (696)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-49 Score=368.30 Aligned_cols=203 Identities=26% Similarity=0.402 Sum_probs=162.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++.. +..++|||||++|+|.++++... ..+++.+++.++.|||.||+||| +++||||
T Consensus 89 l~HpNIV~l~g~~~~------~~~~iVmEy~~gGsL~~~l~~~~---~~l~~~~~~~i~~qia~gL~yLH---~~~IiHR 156 (307)
T 3omv_A 89 TRHVNILLFMGYMTK------DNLAIVTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLH---AKNIIHR 156 (307)
T ss_dssp CCCTTBCCEEEEECS------SSCEEEEECCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCS
T ss_pred CCCCCEeeEEEEEEC------CeEEEEEEcCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCccCC
Confidence 579999999998643 35799999999999999996543 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccCC---CCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMG---SEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~---~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||+++++.+||+|||+|+.... ...||+.|||||++.+ .+|+.++|||||||++|||+||+.|
T Consensus 157 DlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~P 236 (307)
T 3omv_A 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236 (307)
T ss_dssp CCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred ccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCC
Confidence 9999999999999999999999987542 1279999999999864 4589999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhc-ccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 328 TNEMFTGNLTLHNFVKEAL-PERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
|.+.... ..+...+.... ++... ..+..++.++.+++.+||+.||++|||
T Consensus 237 f~~~~~~-~~~~~~~~~~~~~p~~~----------------------------~~~~~~~~~l~~li~~cl~~dP~~RPs 287 (307)
T 3omv_A 237 YSHINNR-DQIIFMVGRGYASPDLS----------------------------KLYKNCPKAMKRLVADCVKKVKEERPL 287 (307)
T ss_dssp TTTCCCH-HHHHHHHHTTCCCCCST----------------------------TSCTTSCHHHHHHHHHHTCSSSTTSCC
T ss_pred CCCCChH-HHHHHHHhcCCCCCCcc----------------------------cccccchHHHHHHHHHHcCCCHhHCcC
Confidence 9764211 11111111111 00000 022346778999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 042634 407 MEEVAAQLLSFRNKLV 422 (427)
Q Consensus 407 ~~ev~~~L~~~~~~~~ 422 (427)
|+||++.|+.++..++
T Consensus 288 ~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 288 FPQILSSIELLQHSLP 303 (307)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhccCC
Confidence 9999999999876653
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.1e-48 Score=362.27 Aligned_cols=202 Identities=26% Similarity=0.421 Sum_probs=166.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh---------hhhccCHHHHHHHHHHHHHHHHHHhh
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE---------ALKNLNLLQRLSIAVDVASALDYLHH 249 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------~~~~l~~~~~~~~~~~i~~~L~~LH~ 249 (427)
++|||||+++++|.. +...++|||||++|+|.++++.... ....+++.+++.++.|||+||+|||
T Consensus 72 l~HpnIV~l~g~~~~-----~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH- 145 (299)
T 4asz_A 72 LQHEHIVKFYGVCVE-----GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA- 145 (299)
T ss_dssp CCCTTBCCEEEEECS-----SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCCccEEEEEee-----CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH-
Confidence 579999999999754 5678999999999999999975421 1246999999999999999999999
Q ss_pred cCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHH
Q 042634 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 250 ~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~el 321 (427)
+++||||||||+|||+++++.+||+|||+|+..... ..||+.|||||++.+..|+.++|||||||++|||
T Consensus 146 --~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~El 223 (299)
T 4asz_A 146 --SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 223 (299)
T ss_dssp --HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred --hCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence 899999999999999999999999999999865332 2578899999999999999999999999999999
Q ss_pred Hh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCC
Q 042634 322 FT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 322 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 400 (427)
+| |+.||.+... ..+...+..... ...+..++.++.++|.+||+.|
T Consensus 224 lt~G~~Pf~~~~~--~~~~~~i~~~~~-------------------------------~~~p~~~~~~~~~li~~cl~~d 270 (299)
T 4asz_A 224 FTYGKQPWYQLSN--NEVIECITQGRV-------------------------------LQRPRTCPQEVYELMLGCWQRE 270 (299)
T ss_dssp HTTTCCTTTTSCH--HHHHHHHHHTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred HcCCCCCCCCCCH--HHHHHHHHcCCC-------------------------------CCCCccchHHHHHHHHHHcCCC
Confidence 98 8999976421 111111111000 0023346778999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 042634 401 PRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 401 P~~Rpt~~ev~~~L~~~~~~~ 421 (427)
|++||||+||.+.|+++.+.-
T Consensus 271 P~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 271 PHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp GGGSCCHHHHHHHHHHHHHHS
T ss_pred hhHCcCHHHHHHHHHHHHhcC
Confidence 999999999999999987653
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.9e-47 Score=360.62 Aligned_cols=201 Identities=27% Similarity=0.443 Sum_probs=160.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-----------hhhccCHHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-----------ALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
++|||||+++++|.. ....++|||||++|+|.++++.... ...++++.+++.++.|||.||+||
T Consensus 100 l~HpnIV~l~g~~~~-----~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL 174 (329)
T 4aoj_A 100 LQHQHIVRFFGVCTE-----GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL 174 (329)
T ss_dssp CCCTTBCCEEEEECS-----SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcEEEEEEE-----CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999755 5678999999999999999865421 124589999999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| +++||||||||+|||+++++.+||+|||+|+..... ..||+.|||||++.+..|+.++|||||||++|
T Consensus 175 H---~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~ 251 (329)
T 4aoj_A 175 A---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW 251 (329)
T ss_dssp H---HTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred h---cCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHH
Confidence 9 899999999999999999999999999999865322 26889999999999999999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
||+| |+.||.+... ..+...+....+ ...+..++.++.++|.+||+
T Consensus 252 Ellt~G~~Pf~~~~~--~~~~~~i~~g~~-------------------------------~~~p~~~~~~~~~li~~cl~ 298 (329)
T 4aoj_A 252 EIFTYGKQPWYQLSN--TEAIDCITQGRE-------------------------------LERPRACPPEVYAIMRGCWQ 298 (329)
T ss_dssp HHHTTSCCTTCSSCH--HHHHHHHHHTCC-------------------------------CCCCTTCCHHHHHHHHHHCC
T ss_pred HHHcCCCCCCCCCCH--HHHHHHHHcCCC-------------------------------CCCcccccHHHHHHHHHHcC
Confidence 9999 8999976421 111111111100 01233466789999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
.||++||||+||++.|+.+.+.
T Consensus 299 ~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 299 REPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp SSTTTSCCHHHHHHHHHHHHHS
T ss_pred cChhHCcCHHHHHHHHHHHhhC
Confidence 9999999999999999998764
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8.1e-48 Score=359.85 Aligned_cols=198 Identities=20% Similarity=0.393 Sum_probs=162.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccch------------hhhhccCHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR------------EALKNLNLLQRLSIAVDVASALDY 246 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~~~~~i~~~L~~ 246 (427)
++|||||+++++|.. ....++|||||++|+|.+++.... .....+++.+++.++.|||+||+|
T Consensus 86 l~HpNIV~l~g~~~~-----~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~y 160 (308)
T 4gt4_A 86 LQHPNVVCLLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEY 160 (308)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcceEEEE-----CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 579999999999755 457899999999999999985432 112458999999999999999999
Q ss_pred HhhcCCCCeeeccccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccCCCCcCccccchhHHHHH
Q 042634 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILL 318 (427)
Q Consensus 247 LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl 318 (427)
|| +++||||||||+|||+++++.+||+|||+|+.... ...||+.|||||++.+..|+.++|||||||++
T Consensus 161 LH---~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl 237 (308)
T 4gt4_A 161 LS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVL 237 (308)
T ss_dssp HH---HTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HH---hCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHH
Confidence 99 89999999999999999999999999999986532 22788999999999999999999999999999
Q ss_pred HHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcC
Q 042634 319 LETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCS 397 (427)
Q Consensus 319 ~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 397 (427)
|||+| |+.||.+... ..+...+..... ...+..|+.++.++|.+||
T Consensus 238 ~El~t~g~~Pf~~~~~--~~~~~~i~~~~~-------------------------------~~~p~~~~~~~~~li~~C~ 284 (308)
T 4gt4_A 238 WEVFSYGLQPYCGYSN--QDVVEMIRNRQV-------------------------------LPCPDDCPAWVYALMIECW 284 (308)
T ss_dssp HHHHTTTCCTTTTCCH--HHHHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHHT
T ss_pred HHHHhCCCCCCCCCCH--HHHHHHHHcCCC-------------------------------CCCcccchHHHHHHHHHHc
Confidence 99998 8999976421 111111111000 0023456778999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHH
Q 042634 398 SELPRERMNMEEVAAQLLSF 417 (427)
Q Consensus 398 ~~dP~~Rpt~~ev~~~L~~~ 417 (427)
+.||++||||+||++.|+.+
T Consensus 285 ~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 285 NEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp CSSGGGSCCHHHHHHHHHTS
T ss_pred CCChhHCcCHHHHHHHHHhc
Confidence 99999999999999999865
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.3e-47 Score=357.01 Aligned_cols=200 Identities=21% Similarity=0.251 Sum_probs=164.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++.. +...|+|||||+||+|.++++.. ..+++.+++.++.||+.||+||| ++|||||
T Consensus 107 l~HpnIV~l~~~~~~-----~~~~~ivmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHR 174 (336)
T 4g3f_A 107 LSSPRIVPLYGAVRE-----GPWVNIFMELLEGGSLGQLIKQM----GCLPEDRALYYLGQALEGLEYLH---TRRILHG 174 (336)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECS
T ss_pred CCCCCCCcEEEEEEE-----CCEEEEEEeccCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 679999999998544 56789999999999999999654 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCCC-ceEecccccccccCCc-----------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCC
Q 042634 259 DLKPSNVLLDGEL-TAHVGDFGLAKFLPEA-----------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 259 Dlkp~NIll~~~~-~~kL~DFG~a~~~~~~-----------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
||||+|||++.++ .+||+|||+|+..... ..||+.|||||++.+..|+.++||||+||++|||++|+.
T Consensus 175 DlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~ 254 (336)
T 4g3f_A 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCH 254 (336)
T ss_dssp CCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred ccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcC
Confidence 9999999999987 6999999999876432 269999999999999999999999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||.+..... .+........+ ..+ .++.++.++.+++.+||+.||++|||
T Consensus 255 Pf~~~~~~~-~~~~i~~~~~~--~~~----------------------------~~~~~s~~~~~li~~~L~~dP~~R~s 303 (336)
T 4g3f_A 255 PWTQYFRGP-LCLKIASEPPP--IRE----------------------------IPPSCAPLTAQAIQEGLRKEPVHRAS 303 (336)
T ss_dssp SSTTTCCSC-CHHHHHHSCCG--GGG----------------------------SCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCCCCHHH-HHHHHHcCCCC--chh----------------------------cCccCCHHHHHHHHHHccCCHhHCcC
Confidence 997643222 12221111100 000 12335667899999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 042634 407 MEEVAAQLLSFRNKL 421 (427)
Q Consensus 407 ~~ev~~~L~~~~~~~ 421 (427)
++|++++|.....+.
T Consensus 304 a~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 304 AMELRRKVGKALQEV 318 (336)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999998877653
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.8e-47 Score=361.49 Aligned_cols=203 Identities=22% Similarity=0.334 Sum_probs=164.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh------------hhccCHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA------------LKNLNLLQRLSIAVDVASALDY 246 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~~~~~i~~~L~~ 246 (427)
.+|||||+++++|.. .+...++|||||++|+|.++++..... ...+++.+++.++.|||+||+|
T Consensus 125 ~hhpnIV~l~g~~~~----~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~y 200 (353)
T 4ase_A 125 GHHLNVVNLLGACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 200 (353)
T ss_dssp CCCTTBCCEEEEECC----TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEEEEEe----cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHh
Confidence 356999999998744 235679999999999999999754321 2458999999999999999999
Q ss_pred HhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHH
Q 042634 247 LHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILL 318 (427)
Q Consensus 247 LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl 318 (427)
|| +++||||||||+|||+++++.+||+|||+|+...... .||+.|||||++.+..|+.++|||||||++
T Consensus 201 LH---~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l 277 (353)
T 4ase_A 201 LA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 277 (353)
T ss_dssp HH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred Hh---hCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHH
Confidence 99 8999999999999999999999999999998764322 578899999999999999999999999999
Q ss_pred HHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcC
Q 042634 319 LETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCS 397 (427)
Q Consensus 319 ~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 397 (427)
|||+| |+.||.+.... ..+...+...... ..+..++.++.++|.+||
T Consensus 278 ~El~t~G~~Pf~~~~~~-~~~~~~i~~g~~~-------------------------------~~p~~~~~~~~~li~~c~ 325 (353)
T 4ase_A 278 WEIFSLGASPYPGVKID-EEFCRRLKEGTRM-------------------------------RAPDYTTPEMYQTMLDCW 325 (353)
T ss_dssp HHHTTTSCCSSTTCCCS-HHHHHHHHHTCCC-------------------------------CCCTTCCHHHHHHHHHHT
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHHcCCCC-------------------------------CCCccCCHHHHHHHHHHc
Confidence 99998 99999764222 1222222221110 022335667899999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH
Q 042634 398 SELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 398 ~~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
+.||++||||+||+++|+++.+.
T Consensus 326 ~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 326 HGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CcChhHCcCHHHHHHHHHHHHHH
Confidence 99999999999999999998654
No 7
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.8e-46 Score=347.82 Aligned_cols=214 Identities=21% Similarity=0.248 Sum_probs=161.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhc-----CCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY-----CET 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~-----~~~ 253 (427)
++|||||++++++...+ ......++|||||++|+|.++++.. .+++..+.+++.|++.||+|||+. ...
T Consensus 54 l~HpNIv~l~g~~~~~~-~~~~~~~lV~Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~ 127 (303)
T 3hmm_A 54 LRHENILGFIAADNKDN-GTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127 (303)
T ss_dssp CCCTTBCCEEEEEEEEC-SSSEEEEEEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC
T ss_pred CCCCCCCcEEEEEEecC-CCceEEEEEecCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCC
Confidence 68999999999976522 1123568999999999999999643 489999999999999999999932 012
Q ss_pred CeeeccccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCCC------CcCccccchhHHHH
Q 042634 254 PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMGS------EVSTSGDVYSFGIL 317 (427)
Q Consensus 254 ~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~~------~~~~~~DiwS~G~v 317 (427)
+||||||||+|||++.++.+||+|||+|+..... ..||+.|||||++.+. .++.++|||||||+
T Consensus 128 ~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvv 207 (303)
T 3hmm_A 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 207 (303)
T ss_dssp CEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH
T ss_pred CEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHH
Confidence 9999999999999999999999999999865332 2699999999998764 46889999999999
Q ss_pred HHHHHhCCCCCCcccCCCcc----------HHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHH
Q 042634 318 LLETFTGKRPTNEMFTGNLT----------LHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLV 387 (427)
Q Consensus 318 l~ell~g~~pf~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (427)
+|||+||..||......... ............ .++ .........+++.
T Consensus 208 l~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~rp------------------~~p~~~~~~~~~~ 265 (303)
T 3hmm_A 208 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK----LRP------------------NIPNRWQSCEALR 265 (303)
T ss_dssp HHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC----CCC------------------CCCGGGGSSHHHH
T ss_pred HHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhccc----CCC------------------CCCccccchHHHH
Confidence 99999998887543222111 111111111000 000 0011112345678
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 042634 388 SVLGIGVTCSSELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 388 ~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
.+.++|.+||+.||++||||+||++.|+++.++
T Consensus 266 ~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 266 VMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999764
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.5e-46 Score=354.88 Aligned_cols=192 Identities=21% Similarity=0.297 Sum_probs=157.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++.. +...|+|||||+||+|.+++..... ..+++.+++.++.||+.||+||| ++|||||
T Consensus 80 l~HpnIV~~~~~~~~-----~~~~yiVmEy~~gg~L~~~i~~~~~--~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHR 149 (350)
T 4b9d_A 80 MKHPNIVQYRESFEE-----NGSLYIVMDYCEGGDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVH---DRKILHR 149 (350)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCTTCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCEET
T ss_pred CCCCCCCcEEEEEEE-----CCEEEEEEeCCCCCcHHHHHHHcCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 579999999998544 6678999999999999999965432 45789999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+...... .||+.|||||++.+..|+.++||||+||++|||++|+.||.+..
T Consensus 150 DlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 229 (350)
T 4b9d_A 150 DIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229 (350)
T ss_dssp TCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 999999999999999999999999875432 79999999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
..+............ .+..++.++.+++.+||+.||++|||++|+++
T Consensus 230 -----~~~~~~~i~~~~~~~----------------------------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 230 -----MKNLVLKIISGSFPP----------------------------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp -----HHHHHHHHHHTCCCC----------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----HHHHHHHHHcCCCCC----------------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112111111110000 11223556899999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 277 h 277 (350)
T 4b9d_A 277 K 277 (350)
T ss_dssp S
T ss_pred C
Confidence 3
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6.3e-46 Score=343.23 Aligned_cols=195 Identities=26% Similarity=0.373 Sum_probs=152.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC--ee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP--IV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~--iv 256 (427)
++|||||++++++... ..+....++|||||++|+|.+++... ..+++..++.++.||+.||+||| ++| |+
T Consensus 82 l~HpnIV~~~~~~~~~-~~~~~~~~lvmEy~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~ylH---~~~~~Ii 153 (290)
T 3fpq_A 82 LQHPNIVRFYDSWEST-VKGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLH---TRTPPII 153 (290)
T ss_dssp CCCTTBCCEEEEEEEE-ETTEEEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCC
T ss_pred CCCCCCCcEEEEEeec-cCCCcEEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEE
Confidence 5799999999986442 12234579999999999999999654 46999999999999999999999 777 99
Q ss_pred eccccCCceeeCC-CCceEecccccccccCCcC----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 257 HCDLKPSNVLLDG-ELTAHVGDFGLAKFLPEAT----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 257 HrDlkp~NIll~~-~~~~kL~DFG~a~~~~~~~----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||||+|||++. ++.+||+|||+|+...... .||+.|||||++.+ +|+.++|||||||++|||++|+.||.+.
T Consensus 154 HRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~ 232 (290)
T 3fpq_A 154 HRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC 232 (290)
T ss_dssp CCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 9999999999974 7999999999998654332 79999999999865 6999999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. ............ .+ ...+..++.++.+++.+||+.||++|||++|++
T Consensus 233 ~~----~~~~~~~i~~~~-----~~----------------------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l 281 (290)
T 3fpq_A 233 QN----AAQIYRRVTSGV-----KP----------------------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281 (290)
T ss_dssp SS----HHHHHHHHTTTC-----CC----------------------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred Cc----HHHHHHHHHcCC-----CC----------------------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence 21 111111111000 00 001111234588999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 282 ~H 283 (290)
T 3fpq_A 282 NH 283 (290)
T ss_dssp TS
T ss_pred cC
Confidence 63
No 10
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5e-46 Score=350.74 Aligned_cols=191 Identities=23% Similarity=0.331 Sum_probs=157.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++.. +...|+|||||++|+|.+++.. ..+++.+++.++.||+.||+||| ++||+||
T Consensus 128 l~HpnIV~l~~~~~~-----~~~~~ivmEy~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHR 194 (346)
T 4fih_A 128 YQHENVVEMYNSYLV-----GDELWVVMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLH---AQGVIHR 194 (346)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEECCCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCcEEEEEEE-----CCEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 579999999998654 5688999999999999998854 34999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+..... ..||+.|||||++.+..|+.++||||+||++|||++|+.||.+..
T Consensus 195 DlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 274 (346)
T 4fih_A 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 274 (346)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred cCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 99999999999999999999999876432 279999999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.......+....+... ..+..++.++.+++.+||+.||++|||++|+++
T Consensus 275 --~~~~~~~i~~~~~~~~-----------------------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 275 --PLKAMKMIRDNLPPRL-----------------------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp --HHHHHHHHHHSSCCCC-----------------------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --HHHHHHHHHcCCCCCC-----------------------------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111112221111100 011224566899999999999999999999976
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 324 H 324 (346)
T 4fih_A 324 H 324 (346)
T ss_dssp C
T ss_pred C
Confidence 3
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.2e-45 Score=343.04 Aligned_cols=188 Identities=20% Similarity=0.285 Sum_probs=154.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++. ++...|+|||||+||+|.+++.+. ..+++..++.++.||+.||+||| ++||+||
T Consensus 89 l~HpnIv~l~~~~~-----~~~~~yivmEy~~gG~L~~~i~~~----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHR 156 (311)
T 4aw0_A 89 LDHPFFVKLYFTFQ-----DDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEYLH---GKGIIHR 156 (311)
T ss_dssp CCCTTBCCEEEEEE-----CSSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCCCeEEEEEE-----eCCEEEEEEecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccC
Confidence 57999999999853 467899999999999999999754 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+|||++.++.+||+|||+|+.+... .+||+.|||||++.+..|+.++||||+||++|||++|+.||.+
T Consensus 157 DlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 236 (311)
T 4aw0_A 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236 (311)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999876321 2799999999999999999999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.. ..+.......... + .+...+.++.+++.+||+.||++|||++|+
T Consensus 237 ~~-----~~~~~~~i~~~~~----~-------------------------~p~~~s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 237 GN-----EGLIFAKIIKLEY----D-------------------------FPEKFFPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp SS-----HHHHHHHHHHTCC----C-------------------------CCTTCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred CC-----HHHHHHHHHcCCC----C-------------------------CCcccCHHHHHHHHHHccCCHhHCcChHHH
Confidence 31 1111111111000 0 111234567899999999999999999987
Q ss_pred HH
Q 042634 411 AA 412 (427)
Q Consensus 411 ~~ 412 (427)
..
T Consensus 283 ~~ 284 (311)
T 4aw0_A 283 EG 284 (311)
T ss_dssp TC
T ss_pred cC
Confidence 53
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.6e-45 Score=340.79 Aligned_cols=188 Identities=24% Similarity=0.279 Sum_probs=153.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++.. +...|+|||||+||+|.+++.+. ..+++.+++.++.||+.||+||| ++||+||
T Consensus 83 l~HpnIv~l~~~~~~-----~~~~~ivmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHR 150 (304)
T 3ubd_A 83 VNHPFIVKLHYAFQT-----EGKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLH---SLGIIYR 150 (304)
T ss_dssp CCCTTEECEEEEEEE-----TTEEEEEECCCTTCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCCCeEEEEEEE-----CCEEEEEEEcCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCC
Confidence 579999999998544 66889999999999999999754 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|||||++.+..|+.++||||+||++|||++|+.||.+..
T Consensus 151 DlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 230 (304)
T 3ubd_A 151 DLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230 (304)
T ss_dssp SCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC
Confidence 9999999999999999999999986432 2379999999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH-----
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM----- 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~----- 407 (427)
..+.......... . .+..++.++.+++.+||+.||++|||+
T Consensus 231 -----~~~~~~~i~~~~~----~-------------------------~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~ 276 (304)
T 3ubd_A 231 -----RKETMTMILKAKL----G-------------------------MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 276 (304)
T ss_dssp -----HHHHHHHHHHCCC----C-------------------------CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTH
T ss_pred -----HHHHHHHHHcCCC----C-------------------------CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCH
Confidence 1111111110000 0 112234568899999999999999985
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
+|+++
T Consensus 277 ~eil~ 281 (304)
T 3ubd_A 277 EEIKR 281 (304)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 56654
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5.7e-45 Score=351.84 Aligned_cols=191 Identities=23% Similarity=0.336 Sum_probs=156.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++.. +...|+|||||+||+|.+++.. ..+++.++..++.||+.||+||| ++|||||
T Consensus 205 l~HpnIV~l~~~~~~-----~~~~~iVmEy~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH---~~~IiHR 271 (423)
T 4fie_A 205 YQHENVVEMYNSYLV-----GDELWVVMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLH---AQGVIHR 271 (423)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCceEEEEEE-----CCEEEEEEeCCCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 679999999998654 5678999999999999998853 34999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+.+... .+||+.|||||++.+..|+.++||||+||++|||++|+.||.+..
T Consensus 272 DiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 351 (423)
T 4fie_A 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 351 (423)
T ss_dssp CCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred cCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 99999999999999999999999876432 279999999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.......+....+..+. .+..++.++.+++.+||+.||++|||++|+++
T Consensus 352 --~~~~~~~i~~~~~~~~~-----------------------------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 352 --PLKAMKMIRDNLPPRLK-----------------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp --HHHHHHHHHHSCCCCCS-----------------------------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --HHHHHHHHHcCCCCCCc-----------------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111222221111100 11223456889999999999999999999976
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 401 H 401 (423)
T 4fie_A 401 H 401 (423)
T ss_dssp C
T ss_pred C
Confidence 3
No 14
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.6e-45 Score=333.52 Aligned_cols=188 Identities=22% Similarity=0.347 Sum_probs=147.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++. +....++||||| +|+|.+++.+. ..+++.+++.++.||+.||+||| ++||+||
T Consensus 70 l~HpnIv~~~~~~~-----~~~~~~ivmEy~-~g~L~~~l~~~----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHR 136 (275)
T 3hyh_A 70 LRHPHIIKLYDVIK-----SKDEIIMVIEYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCH---RHKIVHR 136 (275)
T ss_dssp CCCTTBCCEEEEEE-----CSSEEEEEEECC-CEEHHHHHHHS----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCCCeEEEEEE-----ECCEEEEEEeCC-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 57999999999854 367889999999 78999988654 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+..... ..||+.|||||++.+..+ +.++||||+||++|||++|+.||.+..
T Consensus 137 DiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~ 216 (275)
T 3hyh_A 137 DLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216 (275)
T ss_dssp CCCTTTEEECTTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC
Confidence 99999999999999999999999876433 379999999999998886 579999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
............. . .+...+.++.+++.+||+.||++|||++|+++
T Consensus 217 -----~~~~~~~i~~~~~------------------------~-----~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 217 -----IPVLFKNISNGVY------------------------T-----LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----HHHHHHHHHHTCC------------------------C-----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -----HHHHHHHHHcCCC------------------------C-----CCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1111111100000 0 11123456889999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 263 h 263 (275)
T 3hyh_A 263 D 263 (275)
T ss_dssp C
T ss_pred C
Confidence 4
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.1e-43 Score=327.92 Aligned_cols=195 Identities=18% Similarity=0.280 Sum_probs=144.7
Q ss_pred cccccchhhhccccccCC-------CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC
Q 042634 179 IRHRNLVKIITSCASVDF-------QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC 251 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~ 251 (427)
++|||||++++++...+- ......|+|||||++|+|.+++..... ....++..++.++.||+.||+|||
T Consensus 60 l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH--- 135 (299)
T 4g31_A 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLH--- 135 (299)
T ss_dssp CCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHH---
Confidence 579999999998654221 122346899999999999999976432 133566778999999999999999
Q ss_pred CCCeeeccccCCceeeCCCCceEecccccccccCCc------------------CCCccccccccccCCCCcCccccchh
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA------------------TNNFFNFQIAEYGMGSEVSTSGDVYS 313 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~------------------~~~~~~y~aPE~~~~~~~~~~~DiwS 313 (427)
++||+||||||+|||++.++.+||+|||+|+..... ..||+.|||||++.+..|+.++||||
T Consensus 136 ~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwS 215 (299)
T 4g31_A 136 SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFS 215 (299)
T ss_dssp HTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHH
T ss_pred HCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHH
Confidence 899999999999999999999999999999876432 25999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHH
Q 042634 314 FGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIG 393 (427)
Q Consensus 314 ~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 393 (427)
|||++|||++ ||..... ....+.. +.+... ............+++
T Consensus 216 lGvilyell~---Pf~~~~~----~~~~~~~--------~~~~~~--------------------p~~~~~~~~~~~~li 260 (299)
T 4g31_A 216 LGLILFELLY---PFSTQME----RVRTLTD--------VRNLKF--------------------PPLFTQKYPCEYVMV 260 (299)
T ss_dssp HHHHHHHHHS---CCSSHHH----HHHHHHH--------HHTTCC--------------------CHHHHHHCHHHHHHH
T ss_pred HHHHHHHHcc---CCCCccH----HHHHHHH--------HhcCCC--------------------CCCCcccCHHHHHHH
Confidence 9999999996 7753210 0000000 000000 001223344567899
Q ss_pred hhcCCCCCCCCCCHHHHHH
Q 042634 394 VTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 394 ~~cl~~dP~~Rpt~~ev~~ 412 (427)
.+||+.||++|||+.|+++
T Consensus 261 ~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 261 QDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHTCSSGGGSCCHHHHHT
T ss_pred HHHcCCChhHCcCHHHHhc
Confidence 9999999999999999986
No 16
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.2e-42 Score=327.11 Aligned_cols=138 Identities=23% Similarity=0.333 Sum_probs=122.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|||||++++++.. +...++|||||++|+|.+++. .+++.+++.++.|++.||+||| ++||+||
T Consensus 77 ~~h~nIv~l~~~~~~-----~~~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH---~~gIiHR 141 (361)
T 4f9c_A 77 GGQDNVMGVKYCFRK-----NDHVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIH---QFGIVHR 141 (361)
T ss_dssp CSBTTBCCCSEEEEE-----TTEEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred cCCCCCceEEEEEEE-----CCEEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeC
Confidence 469999999998543 678899999999999999883 3889999999999999999999 8999999
Q ss_pred cccCCceeeCCC-CceEecccccccccCCc----------------------------------CCCccccccccccCCC
Q 042634 259 DLKPSNVLLDGE-LTAHVGDFGLAKFLPEA----------------------------------TNNFFNFQIAEYGMGS 303 (427)
Q Consensus 259 Dlkp~NIll~~~-~~~kL~DFG~a~~~~~~----------------------------------~~~~~~y~aPE~~~~~ 303 (427)
||||+|||++.+ +.+||+|||+|+..... .+||+.|+|||++.+.
T Consensus 142 DiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 221 (361)
T 4f9c_A 142 DVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC 221 (361)
T ss_dssp CCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC
T ss_pred cCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC
Confidence 999999999876 79999999999754321 2699999999999875
Q ss_pred -CcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 304 -EVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 304 -~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
.|+.++||||+||++|||++|+.||...
T Consensus 222 ~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 222 PNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred CCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 5899999999999999999999999654
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=326.82 Aligned_cols=221 Identities=17% Similarity=0.196 Sum_probs=156.5
Q ss_pred cccccchhhhcccccc-CCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASV-DFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~-~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++|||||++++++... .+......|+||||| +|+|.+++... ..+++.+++.++.||+.||+||| ++||||
T Consensus 110 l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~-~g~L~~~i~~~----~~l~~~~~~~~~~qil~al~ylH---~~~iiH 181 (398)
T 4b99_A 110 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSS----QPLTLEHVRYFLYQLLRGLKYMH---SAQVIH 181 (398)
T ss_dssp CCCTTBCCEEEECCCSSCTTTCCCEEEEEECC-SEEHHHHHTSS----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBC
T ss_pred cCCCCcceEeeeeecccccccCCEEEEEEeCC-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCcCcC
Confidence 5799999999987543 244456789999999 57899998765 45999999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCC----------cCCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPE----------ATNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~----------~~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
|||||+|||++.++.+||+|||+|+.... ...||+.|||||++.+. .++.++||||+||++|||++|++
T Consensus 182 RDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~ 261 (398)
T 4b99_A 182 RDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261 (398)
T ss_dssp CCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSC
T ss_pred CCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCC
Confidence 99999999999999999999999986532 22899999999998875 56999999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccc---cchHHHHHHHHHHHhhcCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRS---FSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
||.+... ...+.........+.. ........... ...........+. ...+..+.++.+++.+||+.||++
T Consensus 262 pF~g~~~-~~~l~~I~~~~g~p~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~ 335 (398)
T 4b99_A 262 LFPGKNY-VHQLQLIMMVLGTPSP-AVIQAVGAERV----RAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSA 335 (398)
T ss_dssp SSCCSSH-HHHHHHHHHHHCCCCG-GGTC-----CH----HHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTT
T ss_pred CCCCCCH-HHHHHHHHHhcCCCCh-HHhhhhhhhhh----hhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhH
Confidence 9976321 1111122221111110 00000000000 0000000000000 001123456899999999999999
Q ss_pred CCCHHHHHHH
Q 042634 404 RMNMEEVAAQ 413 (427)
Q Consensus 404 Rpt~~ev~~~ 413 (427)
|||++|++++
T Consensus 336 R~ta~e~L~H 345 (398)
T 4b99_A 336 RISAAAALRH 345 (398)
T ss_dssp SCCHHHHTTS
T ss_pred CcCHHHHhcC
Confidence 9999999863
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=7.9e-41 Score=337.25 Aligned_cols=191 Identities=19% Similarity=0.214 Sum_probs=155.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++ .+....|+|||||+||+|.+++... ..+++..++.++.||+.||+||| ++|||||
T Consensus 249 ~~HP~IV~l~~~f-----~~~~~lylVmEy~~GGdL~~~l~~~----~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHR 316 (689)
T 3v5w_A 249 GDCPFIVCMSYAF-----HTPDKLSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMH---NRFVVYR 316 (689)
T ss_dssp SCCTTBCCEEEEE-----ECSSEEEEEECCCCSCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH---TTTEECC
T ss_pred CCCCCEeEEEEEE-----EECCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 5799999999984 4467899999999999999999754 45999999999999999999999 9999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+|||++.++.+||+|||+|+..... .+||+.|||||++.. ..|+.++||||+||++|||++|+.||.+...
T Consensus 317 DLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~ 396 (689)
T 3v5w_A 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396 (689)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC
T ss_pred CCchHHeEEeCCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 99999999999999999999999876543 389999999999964 6799999999999999999999999976422
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC-----HH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN-----ME 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt-----~~ 408 (427)
.. ............. ..+...+.++.+++.+||+.||++|++ ++
T Consensus 397 ~~--~~~i~~~i~~~~~-----------------------------~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ 445 (689)
T 3v5w_A 397 KD--KHEIDRMTLTMAV-----------------------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQ 445 (689)
T ss_dssp CC--HHHHHHHHHHCCC-----------------------------CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHH
T ss_pred HH--HHHHHHhhcCCCC-----------------------------CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHH
Confidence 21 1111111111000 011223456889999999999999998 67
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
||.+
T Consensus 446 ei~~ 449 (689)
T 3v5w_A 446 EVKE 449 (689)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 7764
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.1e-39 Score=328.21 Aligned_cols=194 Identities=21% Similarity=0.282 Sum_probs=156.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++. .....++|||||+||+|.+++.... ..+++.+++.++.||+.||+||| ++||+||
T Consensus 211 l~hpnIv~l~~~~~-----~~~~~~iv~E~~~gg~L~~~i~~~~---~~l~e~~~~~~~~qi~~al~ylH---~~~iiHR 279 (573)
T 3uto_A 211 LRHPTLVNLHDAFE-----DDNEMVMIYEFMSGGELFEKVADEH---NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHL 279 (573)
T ss_dssp TCCTTBCCEEEEEE-----CSSEEEEEEECCCCCBHHHHHTCTT---SCEEHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCeEEEEEE-----ECCEEEEEEeecCCCcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 67999999999854 4678999999999999999986543 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCC--CceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGE--LTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~--~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+|||++.+ +.+||+|||+|+.+.... .||+.|||||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 280 DlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~ 359 (573)
T 3uto_A 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE 359 (573)
T ss_dssp CCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred cCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 999999999854 799999999999876543 7999999999999999999999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. .+......... ... ........+.++.+++.+||+.||++|||++|++
T Consensus 360 ~~-----~~~~~~i~~~~--------~~~-----------------~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l 409 (573)
T 3uto_A 360 ND-----DETLRNVKSCD--------WNM-----------------DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL 409 (573)
T ss_dssp SH-----HHHHHHHHTTC--------CCC-----------------CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CH-----HHHHHHHHhCC--------CCC-----------------CcccccCCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence 11 11111110000 000 0001122345688999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 410 ~H 411 (573)
T 3uto_A 410 EH 411 (573)
T ss_dssp HS
T ss_pred cC
Confidence 63
No 20
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3e-38 Score=299.09 Aligned_cols=222 Identities=21% Similarity=0.270 Sum_probs=163.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC-----
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET----- 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~----- 253 (427)
++||||+++++.+..... .....++||||+++|+|.+++... .+++..++.++.|++.||+||| +.
T Consensus 75 l~hpniv~~~~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH---~~~~~l~ 145 (322)
T 3soc_A 75 MKHENILQFIGAEKRGTS-VDVDLWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLH---EDIPGLK 145 (322)
T ss_dssp CCCTTBCCEEEEEEEECS-SSEEEEEEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHT---CCEEEET
T ss_pred CCCCCchhhcceeccCCC-CCceEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---hhccccc
Confidence 469999999998755221 123468999999999999999643 4899999999999999999999 78
Q ss_pred -----CeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCC-----CCcCccccchhHH
Q 042634 254 -----PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMG-----SEVSTSGDVYSFG 315 (427)
Q Consensus 254 -----~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~-----~~~~~~~DiwS~G 315 (427)
||+||||||+|||++.++.+||+|||+|+..... ..||..|+|||++.+ ..++.++||||||
T Consensus 146 ~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG 225 (322)
T 3soc_A 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMG 225 (322)
T ss_dssp TEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred cccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHH
Confidence 9999999999999999999999999999765332 268899999999886 3567889999999
Q ss_pred HHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhh
Q 042634 316 ILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVT 395 (427)
Q Consensus 316 ~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 395 (427)
|++|||++|+.||.+................+ ....+.+..... ..............++.++.+++.+
T Consensus 226 ~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~li~~ 294 (322)
T 3soc_A 226 LVLWELASRCTAADGPVDEYMLPFEEEIGQHP-SLEDMQEVVVHK----------KKRPVLRDYWQKHAGMAMLCETIEE 294 (322)
T ss_dssp HHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC-CHHHHHHHHTTS----------CCCCCCCGGGGSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCcchhccchhhhhccCC-chhhhhhhhhcc----------cCCCCccccccccchHHHHHHHHHH
Confidence 99999999999998643322111110000000 000000000000 0000011111234567789999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHH
Q 042634 396 CSSELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 396 cl~~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
||+.||++|||++||++.|+++.+.
T Consensus 295 cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 295 CWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HccCChhhCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999875
No 21
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=9.3e-38 Score=295.53 Aligned_cols=214 Identities=29% Similarity=0.447 Sum_probs=169.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++.........+++..++.++.|++.||+||| ++||+||
T Consensus 92 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~ 163 (321)
T 2qkw_B 92 CRHPHLVSLIGFCDE-----RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHR 163 (321)
T ss_dssp CCCTTBCCEEEECCC-----TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCEeeEEEEEcC-----CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecC
Confidence 469999999998543 56789999999999999999765433345899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++.++.+||+|||+++..... ..||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 164 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~ 243 (321)
T 2qkw_B 164 DVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ 243 (321)
T ss_dssp CCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSC
T ss_pred CCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccc
Confidence 99999999999999999999999864321 1478899999999888999999999999999999999999976
Q ss_pred ccCCC-ccHHHHHHH-hcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 331 MFTGN-LTLHNFVKE-ALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 331 ~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... .....+... .....+...+++.. ......+++.++.+++.+||+.||++|||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ 304 (321)
T 2qkw_B 244 SLPREMVNLAEWAVESHNNGQLEQIVDPNL-------------------ADKIRPESLRKFGDTAVKCLALSSEDRPSMG 304 (321)
T ss_dssp SSSSSCCCHHHHTHHHHTTTCCCSSSSSSC-------------------TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cCcHHHHHHHHHhhhccccccHHHhcChhh-------------------ccccCHHHHHHHHHHHHHHcCCCcccCcCHH
Confidence 43322 122222111 11112222222111 1113456788999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 409 EVAAQLLSFRN 419 (427)
Q Consensus 409 ev~~~L~~~~~ 419 (427)
|+++.|+.+.+
T Consensus 305 ell~~L~~~l~ 315 (321)
T 2qkw_B 305 DVLWKLEYALR 315 (321)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999998865
No 22
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.5e-38 Score=294.68 Aligned_cols=211 Identities=21% Similarity=0.304 Sum_probs=162.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC-----CC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC-----ET 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~-----~~ 253 (427)
++||||+++++.+... .......++||||+++|+|.++++.. .+++..++.++.|++.||+|||... +.
T Consensus 59 l~h~niv~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~ 132 (301)
T 3q4u_A 59 LRHENILGFIASDMTS-RHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132 (301)
T ss_dssp CCCTTBCCEEEEEEEE-ETTEEEEEEEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC
T ss_pred ccCcCeeeEEEeeccc-cCCCceeEEehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC
Confidence 6799999999875442 22234578999999999999999643 4899999999999999999999321 47
Q ss_pred CeeeccccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCCC------CcCccccchhHHHH
Q 042634 254 PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMGS------EVSTSGDVYSFGIL 317 (427)
Q Consensus 254 ~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~~------~~~~~~DiwS~G~v 317 (427)
||+||||||+|||++.++.+||+|||+|+..... ..||+.|+|||++.+. .++.++|||||||+
T Consensus 133 ~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~i 212 (301)
T 3q4u_A 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLV 212 (301)
T ss_dssp EEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHH
T ss_pred CeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHH
Confidence 9999999999999999999999999999754322 2689999999999876 56689999999999
Q ss_pred HHHHHhC----------CCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHH
Q 042634 318 LLETFTG----------KRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLV 387 (427)
Q Consensus 318 l~ell~g----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (427)
+|||++| ..||......................... .........++.
T Consensus 213 l~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~ 270 (301)
T 3q4u_A 213 LWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPN----------------------IPNRWFSDPTLT 270 (301)
T ss_dssp HHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCC----------------------CCGGGGGSHHHH
T ss_pred HHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCC----------------------CChhhccCccHH
Confidence 9999999 78886654444333332222111100000 001112345778
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 042634 388 SVLGIGVTCSSELPRERMNMEEVAAQLLSF 417 (427)
Q Consensus 388 ~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~ 417 (427)
++.+++.+||+.||++|||++||++.|+++
T Consensus 271 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 271 SLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 899999999999999999999999999986
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=297.97 Aligned_cols=203 Identities=25% Similarity=0.382 Sum_probs=164.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.||+||
T Consensus 64 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~ 132 (310)
T 3s95_A 64 LEHPNVLKFIGVLYK-----DKRLNFITEYIKGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLH---SMNIIHR 132 (310)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCTTCBHHHHHHHCC---TTSCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCcCcccEEEEEec-----CCeeEEEEEecCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCC
Confidence 469999999998654 567899999999999999997533 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--------------------cCCCccccccccccCCCCcCccccchhHHHHH
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--------------------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILL 318 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------------------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl 318 (427)
||||+||+++.++.+||+|||+++.... ...||+.|+|||++.+..++.++|||||||++
T Consensus 133 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 212 (310)
T 3s95_A 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212 (310)
T ss_dssp CCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred CCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999986532 22588899999999999999999999999999
Q ss_pred HHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 319 LETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 319 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
|||++|..||................... ...+..++.++.+++.+||+
T Consensus 213 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~~l~ 261 (310)
T 3s95_A 213 CEIIGRVNADPDYLPRTMDFGLNVRGFLD-------------------------------RYCPPNCPPSFFPITVRCCD 261 (310)
T ss_dssp HHHHHTCCSSTTTSCBCTTSSBCHHHHHH-------------------------------HTCCTTCCTTHHHHHHHHTC
T ss_pred HHHhcCCCCCcchhhhHHHHhhhhhcccc-------------------------------ccCCCCCCHHHHHHHHHHcc
Confidence 99999999987542221111000000000 00112244568899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHh
Q 042634 399 ELPRERMNMEEVAAQLLSFRNKLVK 423 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~~~~ 423 (427)
.||++|||++|+++.|+.++..+..
T Consensus 262 ~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 262 LDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred CChhhCcCHHHHHHHHHHHHHhccC
Confidence 9999999999999999999887643
No 24
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.2e-38 Score=306.88 Aligned_cols=213 Identities=19% Similarity=0.209 Sum_probs=168.1
Q ss_pred ccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 178 ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
.++||||+++++.+... ..+....++||||+ +++|.+++.... ..+++..++.++.||+.||+||| +.||+|
T Consensus 104 ~l~h~~iv~~~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH---~~~iiH 175 (364)
T 3op5_A 104 KLKYLGVPKYWGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIH---EHEYVH 175 (364)
T ss_dssp TCSCCCSCCEEEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred hccCCCCCeEEeeeeec-cCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEE
Confidence 35799999999986552 12234579999999 999999986542 45999999999999999999999 889999
Q ss_pred ccccCCceeeC--CCCceEecccccccccCCc-------------CCCccccccccccCCCCcCccccchhHHHHHHHHH
Q 042634 258 CDLKPSNVLLD--GELTAHVGDFGLAKFLPEA-------------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 258 rDlkp~NIll~--~~~~~kL~DFG~a~~~~~~-------------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell 322 (427)
|||||+|||++ .++.+||+|||+|+..... ..||..|+|||++.+..++.++|||||||++|||+
T Consensus 176 rDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 255 (364)
T 3op5_A 176 GDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWL 255 (364)
T ss_dssp CCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHH
Confidence 99999999998 8899999999999765322 14899999999999999999999999999999999
Q ss_pred hCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCC
Q 042634 323 TGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPR 402 (427)
Q Consensus 323 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~ 402 (427)
+|+.||.+.... ..............+..+.++.+. ...++.++.+++.+||+.||+
T Consensus 256 ~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~li~~cl~~~p~ 312 (364)
T 3op5_A 256 TGHLPWEDNLKD-PKYVRDSKIRYRENIASLMDKCFP----------------------AANAPGEIAKYMETVKLLDYT 312 (364)
T ss_dssp HSCCTTGGGTTC-HHHHHHHHHHHHHCHHHHHHHHSC----------------------TTCCCHHHHHHHHHHHTCCTT
T ss_pred hCCCCccccccC-HHHHHHHHHHhhhhHHHHHHHhcc----------------------cccCHHHHHHHHHHHhcCCCC
Confidence 999999864322 222222222222233333322211 122456789999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 042634 403 ERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 403 ~Rpt~~ev~~~L~~~~~~~ 421 (427)
+|||+++|++.|+++.++.
T Consensus 313 ~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 313 EKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp CCCCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHc
Confidence 9999999999999998764
No 25
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.1e-38 Score=296.03 Aligned_cols=202 Identities=26% Similarity=0.430 Sum_probs=159.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ....++||||+++++|.+++.... ..+++.+++.++.|++.||+||| +.||+||
T Consensus 89 l~h~~iv~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~ 156 (307)
T 3lb7_A 89 TRHVNILLFMGYMT------KDNLAIVTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLH---AKNIIHR 156 (307)
T ss_dssp CCCTTBCCEEEEEC------SSSCEEEEECCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEEEEEEEEc------cCcEEEEEecCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeC
Confidence 47999999998743 245789999999999999986443 45899999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccC---CCCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++.+||+|||+|+.... ...||..|+|||++. +..++.++|||||||++|||++|+.|
T Consensus 157 Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~P 236 (307)
T 3lb7_A 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236 (307)
T ss_dssp CCCSSSEEECTTSCEEECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCChhhEEEcCCCCEEEccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999985432 227889999999986 56789999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHh-cccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 328 TNEMFTGNLTLHNFVKEA-LPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
|....... .....+... ..+.+.. ....++.++.+++.+||+.||++|||
T Consensus 237 f~~~~~~~-~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~l~~li~~~l~~~p~~RPs 287 (307)
T 3lb7_A 237 YSHINNRD-QIIFMVGRGYASPDLSK----------------------------LYKNCPKAMKRLVADCVKKVKEERPL 287 (307)
T ss_dssp TTTCCCHH-HHHHHHHHTCCCCCSTT----------------------------SCSSSCHHHHHHHHHHSCSSSTTSCC
T ss_pred CccCCcHH-HHHHHHhcCCCCcchhh----------------------------hhcCCcHHHHHHHHHHhhCChhhCcC
Confidence 97542211 111111111 1111100 11234567899999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 042634 407 MEEVAAQLLSFRNKL 421 (427)
Q Consensus 407 ~~ev~~~L~~~~~~~ 421 (427)
+.||++.|+.+...+
T Consensus 288 ~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 288 FPQILSSIELLQHSL 302 (307)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999987654
No 26
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-37 Score=294.42 Aligned_cols=212 Identities=24% Similarity=0.332 Sum_probs=163.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC-----
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET----- 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~----- 253 (427)
++||||+++++.+.... ......++||||+++|+|.++++. ..+++..++.++.|++.||+||| +.
T Consensus 88 ~~h~~i~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~ 158 (337)
T 3mdy_A 88 MRHENILGFIAADIKGT-GSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLH---TEIFSTQ 158 (337)
T ss_dssp CCCTTBCCEEEEEEESC-GGGCEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHH---SCBCSTT
T ss_pred hcCCCeeeEEEEEccCC-CCCCceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH---Hhhhhhc
Confidence 57999999998865421 112467999999999999999954 34899999999999999999999 77
Q ss_pred ---CeeeccccCCceeeCCCCceEecccccccccCC----------cCCCccccccccccCCCCcCcc------ccchhH
Q 042634 254 ---PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----------ATNNFFNFQIAEYGMGSEVSTS------GDVYSF 314 (427)
Q Consensus 254 ---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~----------~~~~~~~y~aPE~~~~~~~~~~------~DiwS~ 314 (427)
||+||||||+||+++.++.+||+|||+|+.... ...||..|+|||++.+..++.+ +|||||
T Consensus 159 ~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diwsl 238 (337)
T 3mdy_A 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSF 238 (337)
T ss_dssp CBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHH
T ss_pred cCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHH
Confidence 999999999999999999999999999976532 2268899999999987766554 999999
Q ss_pred HHHHHHHHhC----------CCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHH
Q 042634 315 GILLLETFTG----------KRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKE 384 (427)
Q Consensus 315 G~vl~ell~g----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (427)
||++|||++| ..||....................... ..+........
T Consensus 239 G~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~ 296 (337)
T 3mdy_A 239 GLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLR----------------------PSFPNRWSSDE 296 (337)
T ss_dssp HHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC----------------------CCCCGGGGGSH
T ss_pred HHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccC----------------------ccccccchhhH
Confidence 9999999999 555554333332222221111111000 00111123456
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHH
Q 042634 385 CLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 385 ~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
++.++.+++.+||+.||++|||++||++.|+++.+..
T Consensus 297 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 297 CLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 8889999999999999999999999999999998764
No 27
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.2e-37 Score=295.43 Aligned_cols=214 Identities=34% Similarity=0.533 Sum_probs=168.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++||||+++|+|.+++.........+++..+..++.|++.||+|||+.+..||+||
T Consensus 84 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~ 158 (326)
T 3uim_A 84 AVHRNLLRLRGFCMT-----PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHR 158 (326)
T ss_dssp CCCTTBCCCCEEECC-----SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECC
T ss_pred ccCCCccceEEEEec-----CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeC
Confidence 569999999998644 567799999999999999998765444569999999999999999999993222299999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+++...... .||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 159 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (326)
T 3uim_A 159 DVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 238 (326)
T ss_dssp CCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHH
T ss_pred CCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccc
Confidence 999999999999999999999998764322 5899999999998888999999999999999999999999632
Q ss_pred ---cCCCccHHHHHHHhccc-chhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 332 ---FTGNLTLHNFVKEALPE-RLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 332 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
.........++...... ......+... .......++.++.+++.+||+.||++|||+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 299 (326)
T 3uim_A 239 RLANDDDVMLLDWVKGLLKEKKLEALVDVDL-------------------QGNYKDEEVEQLIQVALLCTQSSPMERPKM 299 (326)
T ss_dssp HHTTTSCSBHHHHHTTTTSSCCSTTSSCTTC-------------------TTSCCHHHHHHHHHHHHHHTCSCGGGSCCH
T ss_pred ccccccchhHHHHHHHHhhchhhhhhcChhh-------------------ccccCHHHHHHHHHHHHHHhCcCCccCCCH
Confidence 12222333333322221 1122222111 111345678899999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 408 EEVAAQLLS 416 (427)
Q Consensus 408 ~ev~~~L~~ 416 (427)
+||+++|+.
T Consensus 300 ~ell~~L~~ 308 (326)
T 3uim_A 300 SEVVRMLEG 308 (326)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhcC
Confidence 999999975
No 28
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=8.7e-38 Score=301.42 Aligned_cols=201 Identities=22% Similarity=0.395 Sum_probs=162.4
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
+||||+++++.+.. ....++||||+++|+|.+++..... ....+++.+++.++.||+.||+||
T Consensus 145 ~hpnIv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 219 (370)
T 2psq_A 145 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 219 (370)
T ss_dssp CCTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEeeEEEEEcc-----CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 79999999998644 5678999999999999999865421 113478999999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| ++||+||||||+|||++.++.+||+|||+|+..... ..+++.|+|||++.+..++.++|||||||++|
T Consensus 220 H---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ 296 (370)
T 2psq_A 220 A---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW 296 (370)
T ss_dssp H---HTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred H---hCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHH
Confidence 9 899999999999999999999999999999865432 25667899999999999999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
||++ |..||.+... ..+...+..... ...+..++.++.+++.+||+
T Consensus 297 ellt~g~~p~~~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~~l~ 343 (370)
T 2psq_A 297 EIFTLGGSPYPGIPV--EELFKLLKEGHR-------------------------------MDKPANCTNELYMMMRDCWH 343 (370)
T ss_dssp HHHTTSCCSSTTCCG--GGHHHHHHTTCC-------------------------------CCCCTTSCHHHHHHHHHHTC
T ss_pred HHHcCCCCCCCCCCH--HHHHHHHhcCCC-------------------------------CCCCCCCCHHHHHHHHHHcC
Confidence 9999 9999975321 111111111100 00122355678999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
.||++|||++|+++.|+++....
T Consensus 344 ~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 344 AVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CChhhCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999997654
No 29
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.4e-38 Score=296.07 Aligned_cols=201 Identities=27% Similarity=0.377 Sum_probs=155.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC--ee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP--IV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~--iv 256 (427)
++||||+++++.+.. ....++||||+++|+|.+++..... ...+++..++.++.|++.||+||| +.| |+
T Consensus 91 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~iv 161 (309)
T 3p86_A 91 LRHPNIVLFMGAVTQ-----PPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLH---NRNPPIV 161 (309)
T ss_dssp CCCTTBCCEEEEECS-----TTCCEEEEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCC
T ss_pred CCCCCEeeEEEEEEE-----CCceEEEEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEE
Confidence 469999999998543 5578999999999999999976532 145899999999999999999999 888 99
Q ss_pred eccccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||||+||+++.++.+||+|||+++..... ..||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 162 H~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~ 241 (309)
T 3p86_A 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241 (309)
T ss_dssp CTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTT
T ss_pred CCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999865432 3788999999999999999999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... .....+..... ....+..++.++.+++.+||+.||++|||++|+
T Consensus 242 ~~~~--~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l 289 (309)
T 3p86_A 242 LNPA--QVVAAVGFKCK------------------------------RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATI 289 (309)
T ss_dssp SCHH--HHHHHHHHSCC------------------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCHH--HHHHHHHhcCC------------------------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 3111 11111000000 000122345668999999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 411 AAQLLSFRNK 420 (427)
Q Consensus 411 ~~~L~~~~~~ 420 (427)
++.|+.+.+.
T Consensus 290 l~~L~~~~~~ 299 (309)
T 3p86_A 290 MDLLRPLIKS 299 (309)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHh
Confidence 9999998654
No 30
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=300.79 Aligned_cols=226 Identities=21% Similarity=0.259 Sum_probs=164.4
Q ss_pred ccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC----
Q 042634 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET---- 253 (427)
Q Consensus 178 ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~---- 253 (427)
.++||||+++++.+......+....++||||+++|+|.+++... ..++..+..++.|++.||+||| +.
T Consensus 63 ~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~~L~~LH---~~~~~~ 134 (336)
T 3g2f_A 63 LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-----TSDWVSSCRLAHSVTRGLAYLH---TELPRG 134 (336)
T ss_dssp TCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHH---CCBCCG
T ss_pred hccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHH---hhhccc
Confidence 36899999999866554455556678999999999999998543 3688899999999999999999 77
Q ss_pred -----CeeeccccCCceeeCCCCceEecccccccccCCc--------------CCCccccccccccCC-------CCcCc
Q 042634 254 -----PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------------TNNFFNFQIAEYGMG-------SEVST 307 (427)
Q Consensus 254 -----~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------------~~~~~~y~aPE~~~~-------~~~~~ 307 (427)
||+||||||+|||++.++.+||+|||+|+..... ..||..|+|||++.+ ..++.
T Consensus 135 ~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 214 (336)
T 3g2f_A 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALK 214 (336)
T ss_dssp GGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHH
T ss_pred cccccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCccccccccccc
Confidence 9999999999999999999999999999865421 258899999999987 45678
Q ss_pred cccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh-cccc---hhcccCccccccccccchhhhcccccc-ccccch
Q 042634 308 SGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEA-LPER---LAEIVDPVLLVEREEGETSKANAHKQF-TRSFSV 382 (427)
Q Consensus 308 ~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 382 (427)
++|||||||++|||++|..||............+.... ..+. ....+.... ....+ ......
T Consensus 215 ~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 281 (336)
T 3g2f_A 215 QVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREK-------------QRPKFPEAWKEN 281 (336)
T ss_dssp HHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSC-------------CCCCCCTTCCCC
T ss_pred ccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccc-------------cCCCCCcccccc
Confidence 99999999999999999777643221111000000000 0000 000000000 00000 000122
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHhh
Q 042634 383 KECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFRNKLVKN 424 (427)
Q Consensus 383 ~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~~~~~ 424 (427)
..++.++.+++.+||+.||++|||++|+++.|+++.+.+.+|
T Consensus 282 ~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 282 SLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp SHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred cchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence 346778999999999999999999999999999998765443
No 31
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.9e-38 Score=304.78 Aligned_cols=198 Identities=24% Similarity=0.391 Sum_probs=161.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 169 l~hpniv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHr 237 (377)
T 3cbl_A 169 YSHPNIVRLIGVCTQ-----KQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLE---SKCCIHR 237 (377)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCEEEEEEEEec-----CCCcEEEEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCc
Confidence 579999999998644 457899999999999999986543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+|||++.++.+||+|||+|+...... .++..|+|||++....++.++|||||||++|||++ |..||.
T Consensus 238 Dlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~ 317 (377)
T 3cbl_A 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP 317 (377)
T ss_dssp CCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999998654321 24567999999988899999999999999999998 999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.... ......+..... ...+..++.++.+++.+||+.||++|||++|
T Consensus 318 ~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~ 364 (377)
T 3cbl_A 318 NLSN--QQTREFVEKGGR-------------------------------LPCPELCPDAVFRLMEQCWAYEPGQRPSFST 364 (377)
T ss_dssp TSCH--HHHHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCH--HHHHHHHHcCCC-------------------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 6421 111111111000 0012335667899999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 410 VAAQLLSFRNK 420 (427)
Q Consensus 410 v~~~L~~~~~~ 420 (427)
+++.|++++++
T Consensus 365 i~~~L~~i~~~ 375 (377)
T 3cbl_A 365 IYQELQSIRKR 375 (377)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999999865
No 32
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8.9e-38 Score=292.38 Aligned_cols=190 Identities=19% Similarity=0.259 Sum_probs=154.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... .+++..+..++.|++.||+||| +.||+||
T Consensus 74 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 140 (297)
T 3fxz_A 74 NKNPNIVNYLDSYLV-----GDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLH---SNQVIHR 140 (297)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCeEeEEEEE-----CCEEEEEEECCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---hCCceeC
Confidence 579999999998654 55789999999999999998643 4899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+|+..... ..||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 141 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 220 (297)
T 3fxz_A 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (297)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999865432 278999999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
... ..........+ . ...+..++..+.+++.+||+.||++|||++|+++
T Consensus 221 ~~~-~~~~~~~~~~~-~-----------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 221 PLR-ALYLIATNGTP-E-----------------------------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHH-HHHHHHHHCSC-C-----------------------------CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHH-HHHHHHhCCCC-C-----------------------------CCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 110 00000000000 0 0012234566899999999999999999999986
No 33
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=294.85 Aligned_cols=198 Identities=24% Similarity=0.395 Sum_probs=160.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. +...++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 107 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~ 175 (325)
T 3kul_A 107 FDHPNIIRLEGVVTR-----GRLAMIVTEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLS---DLGYVHR 175 (325)
T ss_dssp CCCTTBCCEEEEECG-----GGCCEEEEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCCCcEEEEEEe-----CCccEEEeeCCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCeeCC
Confidence 479999999998644 567899999999999999986543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+||+++.++.+||+|||+++...... .+|..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 176 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~ 255 (325)
T 3kul_A 176 DLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255 (325)
T ss_dssp CCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred CCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999998764322 45668999999998899999999999999999999 99999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ......+..... ...+..++.++.+++.+||+.||++|||++
T Consensus 256 ~~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 302 (325)
T 3kul_A 256 WNMTN--RDVISSVEEGYR-------------------------------LPAPMGCPHALHQLMLDCWHKDRAQRPRFS 302 (325)
T ss_dssp TTSCH--HHHHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred ccCCH--HHHHHHHHcCCC-------------------------------CCCCCCcCHHHHHHHHHHccCChhhCcCHH
Confidence 65311 111111111000 001223456789999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 042634 409 EVAAQLLSFRNK 420 (427)
Q Consensus 409 ev~~~L~~~~~~ 420 (427)
||++.|+.+.+.
T Consensus 303 eil~~L~~l~~~ 314 (325)
T 3kul_A 303 QIVSVLDALIRS 314 (325)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhC
Confidence 999999998754
No 34
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=8.8e-38 Score=292.05 Aligned_cols=218 Identities=23% Similarity=0.392 Sum_probs=160.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+...+ ....++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 68 l~h~~iv~~~~~~~~~~---~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 138 (295)
T 3ugc_A 68 LQHDNIVKYKGVCYSAG---RRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLG---TKRYIHR 138 (295)
T ss_dssp CCCTTBCCEEEEECHHH---HTSCEEEEECCTTCBHHHHHHHCG---GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEEecCC---CCceEEEEEeCCCCCHHHHHHhcc---cccCHHHHHHHHHHHHHHHHHHh---cCCcccC
Confidence 46999999999864421 345789999999999999997653 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||.+.+..++.++|||||||++|||++|..||.
T Consensus 139 Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~ 218 (295)
T 3ugc_A 139 DLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218 (295)
T ss_dssp CCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred CCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccC
Confidence 99999999999999999999999876432 246667999999999999999999999999999999999986
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
... ................. ...........+...+..++.++.+++.+||+.||++|||++|
T Consensus 219 ~~~------~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 281 (295)
T 3ugc_A 219 SPP------AEFMRMIGNDKQGQMIV-----------FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 281 (295)
T ss_dssp SHH------HHHHHHHCTTCCTHHHH-----------HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCh------HHHHhhhcCccccchhH-----------HHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHH
Confidence 421 01100000000000000 0000000000011123345678999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 042634 410 VAAQLLSFRNKLV 422 (427)
Q Consensus 410 v~~~L~~~~~~~~ 422 (427)
+++.|+++++.+.
T Consensus 282 l~~~L~~l~~~l~ 294 (295)
T 3ugc_A 282 LALRVDQIRDNMA 294 (295)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHhcc
Confidence 9999999987653
No 35
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.8e-37 Score=303.83 Aligned_cols=200 Identities=28% Similarity=0.375 Sum_probs=162.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. .....++||||+++|+|.+++..... ..+++..++.++.|++.||+||| ++||+||
T Consensus 243 l~h~niv~~~~~~~~----~~~~~~iv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHr 313 (450)
T 1k9a_A 243 LRHSNLVQLLGVIVE----EKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 313 (450)
T ss_dssp CCCTTBCCEEEEEEC----TTSCEEEEEECCTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred ccCCCEEEEEEEEEc----CCCceEEEEEecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCC
Confidence 579999999998643 23468999999999999999975432 34789999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~ 334 (427)
||||+|||++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 314 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~ 393 (450)
T 1k9a_A 314 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 393 (450)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT
T ss_pred CCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999999999865432 256778999999999999999999999999999998 99999764221
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQL 414 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L 414 (427)
.....+..... ...+..++.++.++|.+||+.||++|||++|+++.|
T Consensus 394 --~~~~~i~~~~~-------------------------------~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L 440 (450)
T 1k9a_A 394 --DVVPRVEKGYK-------------------------------MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQL 440 (450)
T ss_dssp --THHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred --HHHHHHHcCCC-------------------------------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 11111111100 002234567799999999999999999999999999
Q ss_pred HHHHHH
Q 042634 415 LSFRNK 420 (427)
Q Consensus 415 ~~~~~~ 420 (427)
+.+...
T Consensus 441 ~~i~~~ 446 (450)
T 1k9a_A 441 EHIRTH 446 (450)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998753
No 36
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.1e-37 Score=297.61 Aligned_cols=203 Identities=23% Similarity=0.356 Sum_probs=161.7
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh-----------------------------------
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA----------------------------------- 224 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----------------------------------- 224 (427)
+||||+++++.+.. .+...++||||+++|+|.+++......
T Consensus 84 ~hpniv~~~~~~~~----~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (359)
T 3vhe_A 84 HHLNVVNLLGACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSS 159 (359)
T ss_dssp CCTTBCCEEEEECS----TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------
T ss_pred CCcceeeeeeeeec----CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcc
Confidence 79999999998644 234579999999999999998754320
Q ss_pred ---------------------------hhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecc
Q 042634 225 ---------------------------LKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGD 277 (427)
Q Consensus 225 ---------------------------~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 277 (427)
...+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~D 236 (359)
T 3vhe_A 160 QSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICD 236 (359)
T ss_dssp ------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred ccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEe
Confidence 122899999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhccc
Q 042634 278 FGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEALPE 348 (427)
Q Consensus 278 FG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~ 348 (427)
||+++..... ..+|..|+|||++.+..++.++|||||||++|||++ |..||.+..... .+...+......
T Consensus 237 fg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~ 315 (359)
T 3vhe_A 237 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRM 315 (359)
T ss_dssp CGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTCCC
T ss_pred ccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcCCCC
Confidence 9999865332 256778999999999999999999999999999998 999997642221 111111111100
Q ss_pred chhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHH
Q 042634 349 RLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
. .+..++.++.+++.+||+.||++|||++|++++|+++.+..
T Consensus 316 ~-------------------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 316 R-------------------------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp C-------------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred C-------------------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 0 11223456899999999999999999999999999997653
No 37
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.7e-37 Score=292.87 Aligned_cols=189 Identities=21% Similarity=0.317 Sum_probs=153.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 71 l~hpnIv~l~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHr 138 (328)
T 3fe3_A 71 LNHPNIVKLFEVIET-----EKTLYLIMEYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCH---QKRIVHR 138 (328)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEEEE-----CCEEEEEEECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecc
Confidence 579999999998543 56789999999999999998654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcC-ccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVS-TSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~-~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+|+..... ..||+.|+|||++.+..++ .++||||+||++|||++|+.||.+..
T Consensus 139 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 218 (328)
T 3fe3_A 139 DLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218 (328)
T ss_dssp CCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999865433 2789999999999888775 89999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
............. . .+...+.++.+++.+||+.||++|||++|+++
T Consensus 219 -----~~~~~~~i~~~~~----~-------------------------~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 219 -----LKELRERVLRGKY----R-------------------------IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -----HHHHHHHHHHCCC----C-------------------------CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHHHHhCCC----C-------------------------CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111111110000 0 11113455789999999999999999999976
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 265 h 265 (328)
T 3fe3_A 265 D 265 (328)
T ss_dssp C
T ss_pred C
Confidence 3
No 38
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.9e-36 Score=283.32 Aligned_cols=210 Identities=28% Similarity=0.423 Sum_probs=164.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++..... ...+++..+..++.|++.||+||| +.||+||
T Consensus 87 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~ 157 (307)
T 2nru_A 87 CQHENLVELLGFSSD-----GDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLH---ENHHIHR 157 (307)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred cCCCCeEEEEEEEec-----CCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHh---cCCeecC
Confidence 469999999998543 5678999999999999999865332 145899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++.++.+||+|||+++..... ..|+..|+|||.+.+ .++.++|||||||++|||++|..||..
T Consensus 158 dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~ 236 (307)
T 2nru_A 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDE 236 (307)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCT
T ss_pred CCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCccc
Confidence 99999999999999999999999865432 268899999998765 589999999999999999999999986
Q ss_pred ccCCCccHHHHHHHh--cccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 331 MFTGNLTLHNFVKEA--LPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... .+..+.... ....+.+.+++.. ...+..++..+.+++.+||+.||++|||++
T Consensus 237 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 295 (307)
T 2nru_A 237 HREPQ-LLLDIKEEIEDEEKTIEDYIDKKM--------------------NDADSTSVEAMYSVASQCLHEKKNKRPDIK 295 (307)
T ss_dssp TBSSS-BTTHHHHHHHTTSCCHHHHSCSSC--------------------SCCCHHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CcchH-HHHHHHHHhhhhhhhhhhhccccc--------------------cccchHHHHHHHHHHHHHcCCCcccCcCHH
Confidence 43322 121211111 1111222222211 113456788899999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 409 EVAAQLLSFRN 419 (427)
Q Consensus 409 ev~~~L~~~~~ 419 (427)
||++.|+++..
T Consensus 296 ~l~~~L~~l~~ 306 (307)
T 2nru_A 296 KVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhc
Confidence 99999998854
No 39
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.3e-37 Score=297.60 Aligned_cols=198 Identities=24% Similarity=0.425 Sum_probs=152.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.||+||
T Consensus 103 l~h~niv~~~~~~~~-----~~~~~lv~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 171 (373)
T 2qol_A 103 FDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLS---DMGYVHR 171 (373)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCCCeEEEEEee-----CCceEEEEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCC
Confidence 479999999998644 567899999999999999997543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+||+++.++.+||+|||+++...... .++..|+|||++.+..++.++|||||||++||+++ |+.||
T Consensus 172 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~ 251 (373)
T 2qol_A 172 DLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251 (373)
T ss_dssp CCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTT
T ss_pred CCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999998764322 34567999999999999999999999999999998 99999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ......+..... ...+..++.++.+++.+||+.||++|||++
T Consensus 252 ~~~~~--~~~~~~i~~~~~-------------------------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ 298 (373)
T 2qol_A 252 WEMSN--QDVIKAVDEGYR-------------------------------LPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298 (373)
T ss_dssp TTCCH--HHHHHHHHTTEE-------------------------------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCH--HHHHHHHHcCCC-------------------------------CCCCccccHHHHHHHHHHhCcChhhCcCHH
Confidence 75321 111111111000 001223456789999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 042634 409 EVAAQLLSFRNK 420 (427)
Q Consensus 409 ev~~~L~~~~~~ 420 (427)
||++.|+++.+.
T Consensus 299 ~i~~~L~~~~~~ 310 (373)
T 2qol_A 299 QIVSILDKLIRN 310 (373)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998754
No 40
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.7e-37 Score=293.13 Aligned_cols=197 Identities=21% Similarity=0.365 Sum_probs=160.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ...++|+||+.+|+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 74 l~h~~iv~~~~~~~~------~~~~~v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~ 141 (327)
T 3poz_A 74 VDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHR 141 (327)
T ss_dssp CCBTTBCCEEEEEES------SSEEEEEECCTTCBHHHHHHHST---TSCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeEEEEEEec------CCeEEEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHh---hCCeeCC
Confidence 579999999998654 34689999999999999987543 45899999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+|||++.++.+||+|||+|+...... .+|..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 142 Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 221 (327)
T 3poz_A 142 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp CCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred CCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCcc
Confidence 999999999999999999999998654322 55778999999999999999999999999999999 999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.... ..+...+...... ..+..++.++.+++.+||+.||++|||++|
T Consensus 222 ~~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e 268 (327)
T 3poz_A 222 GIPA--SEISSILEKGERL-------------------------------PQPPICTIDVYMIMVKCWMIDADSRPKFRE 268 (327)
T ss_dssp TCCG--GGHHHHHHTTCCC-------------------------------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHH
T ss_pred CCCH--HHHHHHHHcCCCC-------------------------------CCCccCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 5421 1122221111100 011224556899999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 410 VAAQLLSFRNK 420 (427)
Q Consensus 410 v~~~L~~~~~~ 420 (427)
+++.|+.+...
T Consensus 269 ll~~l~~~~~~ 279 (327)
T 3poz_A 269 LIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHhh
Confidence 99999998654
No 41
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.8e-37 Score=283.83 Aligned_cols=198 Identities=26% Similarity=0.431 Sum_probs=160.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 62 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~ 130 (269)
T 4hcu_A 62 LSHPKLVQLYGVCLE-----QAPICLVFEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLE---EACVIHR 130 (269)
T ss_dssp CCCTTBCCEEEEECS-----SSSEEEEEECCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEEec-----CCceEEEEEeCCCCcHHHHHHhcC---cccCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 469999999998543 567899999999999999986543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++||||+||++|||++ |+.||..
T Consensus 131 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~ 210 (269)
T 4hcu_A 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210 (269)
T ss_dssp CCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999999865432 256678999999998999999999999999999999 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+...... ..+...+.++.+++.+||+.||++|||++|+
T Consensus 211 ~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l 257 (269)
T 4hcu_A 211 RSN--SEVVEDISTGFRL-------------------------------YKPRLASTHVYQIMNHCWRERPEDRPAFSRL 257 (269)
T ss_dssp CCH--HHHHHHHHTTCCC-------------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCH--HHHHHHHhcCccC-------------------------------CCCCcCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 311 1111111110000 0112234568999999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 411 AAQLLSFRNK 420 (427)
Q Consensus 411 ~~~L~~~~~~ 420 (427)
++.|+++.++
T Consensus 258 l~~l~~l~~~ 267 (269)
T 4hcu_A 258 LRQLAEIAES 267 (269)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHc
Confidence 9999998763
No 42
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-37 Score=296.88 Aligned_cols=201 Identities=22% Similarity=0.394 Sum_probs=155.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. .+...++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 147 l~hpnIv~~~~~~~~----~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHr 216 (373)
T 3c1x_A 147 FSHPNVLSLLGICLR----SEGSPLVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKFLA---SKKFVHR 216 (373)
T ss_dssp CCCTTBCCCCEEECC----CSSCCEEEEECCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCcceEEEEEEc----CCCCeEEEEECCCCCCHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCEecC
Confidence 579999999997633 2356789999999999999997543 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~p 327 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||++ |.+|
T Consensus 217 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p 296 (373)
T 3c1x_A 217 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 296 (373)
T ss_dssp CCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCC
Confidence 99999999999999999999999865322 255678999999999999999999999999999999 7778
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|...... .....+..... ...+..++.++.+++.+||+.||++|||+
T Consensus 297 ~~~~~~~--~~~~~~~~~~~-------------------------------~~~p~~~~~~l~~li~~cl~~dp~~RPs~ 343 (373)
T 3c1x_A 297 YPDVNTF--DITVYLLQGRR-------------------------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSF 343 (373)
T ss_dssp CTTSCSS--CHHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCCHH--HHHHHHHcCCC-------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 7653221 12111111100 00122345678999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 042634 408 EEVAAQLLSFRNKLV 422 (427)
Q Consensus 408 ~ev~~~L~~~~~~~~ 422 (427)
+|+++.|+++...+.
T Consensus 344 ~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 344 SELVSRISAIFSTFI 358 (373)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999987653
No 43
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=288.48 Aligned_cols=204 Identities=26% Similarity=0.375 Sum_probs=154.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. +..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+...+||+||
T Consensus 58 l~hp~iv~~~~~~~-------~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~ 129 (307)
T 2eva_A 58 VNHPNIVKLYGACL-------NPVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129 (307)
T ss_dssp CCCTTBCCEEEBCT-------TTTEEEEECCTTCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCC
T ss_pred CCCCCcCeEEEEEc-------CCcEEEEEcCCCCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecC
Confidence 46999999998754 247899999999999999875432 1347889999999999999999993222899999
Q ss_pred cccCCceeeCCCCc-eEecccccccccCCc---CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELT-AHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~-~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
||||+||+++.++. +||+|||+++..... ..|+..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 130 dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 209 (307)
T 2eva_A 130 DLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP 209 (307)
T ss_dssp CCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS
T ss_pred CCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc
Confidence 99999999988876 799999999865432 37889999999999999999999999999999999999999754222
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQL 414 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L 414 (427)
.............. .....++..+.+++.+||+.||++|||++|+++.|
T Consensus 210 ~~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 258 (307)
T 2eva_A 210 AFRIMWAVHNGTRP-------------------------------PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258 (307)
T ss_dssp HHHHHHHHHTTCCC-------------------------------CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCC-------------------------------CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 11111111100000 01122455688999999999999999999999999
Q ss_pred HHHHHHH
Q 042634 415 LSFRNKL 421 (427)
Q Consensus 415 ~~~~~~~ 421 (427)
+.+.+.+
T Consensus 259 ~~~~~~~ 265 (307)
T 2eva_A 259 THLMRYF 265 (307)
T ss_dssp HHHGGGC
T ss_pred HHHHHhc
Confidence 9987654
No 44
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.5e-37 Score=285.20 Aligned_cols=198 Identities=22% Similarity=0.363 Sum_probs=152.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ....++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 73 l~h~~iv~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 140 (281)
T 1mp8_A 73 FDHPHIVKLIGVIT------ENPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLE---SKRFVHR 140 (281)
T ss_dssp CCCTTBCCEEEEEC------SSSCEEEEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCccceEEEEEc------cCccEEEEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 46999999998752 246789999999999999986543 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||+++...... .+++.|+|||++.+..++.++|||||||++|||++ |..||.+
T Consensus 141 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~ 220 (281)
T 1mp8_A 141 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220 (281)
T ss_dssp CCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCc
Confidence 999999999999999999999998764322 45678999999988899999999999999999996 9999976
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... .....+...... ..+..++.++.+++.+||+.||++|||++|+
T Consensus 221 ~~~~--~~~~~i~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 267 (281)
T 1mp8_A 221 VKNN--DVIGRIENGERL-------------------------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267 (281)
T ss_dssp CCGG--GHHHHHHTTCCC-------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCHH--HHHHHHHcCCCC-------------------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 4221 111111110000 0122345678999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 411 AAQLLSFRNKL 421 (427)
Q Consensus 411 ~~~L~~~~~~~ 421 (427)
++.|+++.++-
T Consensus 268 ~~~l~~~~~~~ 278 (281)
T 1mp8_A 268 KAQLSTILEEE 278 (281)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999997764
No 45
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.4e-36 Score=287.95 Aligned_cols=197 Identities=24% Similarity=0.379 Sum_probs=159.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++. +...++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 72 l~h~~iv~~~~~~~------~~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 139 (325)
T 3kex_A 72 LDHAHIVRLLGLCP------GSSLQLVTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLE---EHGMVHR 139 (325)
T ss_dssp CCCTTBCCEEEEEC------BSSEEEEEECCTTCBSHHHHHSSG---GGSCTTHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCcCeEEEEEc------CCccEEEEEeCCCCCHHHHHHHcc---ccCCHHHHHHHHHHHHHHHHHHH---hCCCCCC
Confidence 47999999999753 245789999999999999987653 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+|||++.++.+||+|||+|+...... .++..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 140 Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 219 (325)
T 3kex_A 140 NLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA 219 (325)
T ss_dssp CCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcc
Confidence 999999999999999999999998764322 56678999999998999999999999999999999 999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+... ......+....... .+..++.++.+++.+||+.||++|||++|
T Consensus 220 ~~~~--~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e 266 (325)
T 3kex_A 220 GLRL--AEVPDLLEKGERLA-------------------------------QPQICTIDVYMVMVKCWMIDENIRPTFKE 266 (325)
T ss_dssp TSCT--THHHHHHHTTCBCC-------------------------------CCTTBCTTTTHHHHHHTCSCTTTSCCHHH
T ss_pred ccCH--HHHHHHHHcCCCCC-------------------------------CCCcCcHHHHHHHHHHcCCChhhCcCHHH
Confidence 6421 11222211111000 11113345788999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 410 VAAQLLSFRNK 420 (427)
Q Consensus 410 v~~~L~~~~~~ 420 (427)
+++.|+++...
T Consensus 267 l~~~l~~~~~~ 277 (325)
T 3kex_A 267 LANEFTRMARD 277 (325)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHHhc
Confidence 99999998654
No 46
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.2e-37 Score=284.08 Aligned_cols=198 Identities=26% Similarity=0.441 Sum_probs=159.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 60 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~ 128 (268)
T 3sxs_A 60 LSHPKLVKFYGVCSK-----EYPIYIVTEYISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLE---SHQFIHR 128 (268)
T ss_dssp CCCTTBCCEEEEECS-----SSSEEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEEES
T ss_pred CCCCCEeeEEEEEcc-----CCceEEEEEccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 469999999998543 567899999999999999986543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||.+.+..++.++||||+||++|||++ |+.||..
T Consensus 129 dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (268)
T 3sxs_A 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208 (268)
T ss_dssp SCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccc
Confidence 999999999999999999999998654432 45667999999998899999999999999999999 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... .......... . ...+..++.++.+++.+||+.||++|||++|+
T Consensus 209 ~~~~-----~~~~~~~~~~-----~-----------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 255 (268)
T 3sxs_A 209 YTNS-----EVVLKVSQGH-----R-----------------------LYRPHLASDTIYQIMYSCWHELPEKRPTFQQL 255 (268)
T ss_dssp SCHH-----HHHHHHHTTC-----C-----------------------CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred cChH-----HHHHHHHcCC-----C-----------------------CCCCCcChHHHHHHHHHHcCCChhhCcCHHHH
Confidence 3211 1111100000 0 00111234568899999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 411 AAQLLSFRNK 420 (427)
Q Consensus 411 ~~~L~~~~~~ 420 (427)
++.|+.++++
T Consensus 256 l~~L~~l~~~ 265 (268)
T 3sxs_A 256 LSSIEPLREK 265 (268)
T ss_dssp HHHHGGGCC-
T ss_pred HHHHHHhhhc
Confidence 9999998655
No 47
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=7.1e-37 Score=288.29 Aligned_cols=201 Identities=24% Similarity=0.398 Sum_probs=161.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh--------------------hhhccCHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE--------------------ALKNLNLLQRLSIAV 238 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~~~~ 238 (427)
++||||+++++.+.. ....++||||+++|+|.+++..... ....+++.+++.++.
T Consensus 83 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 157 (314)
T 2ivs_A 83 VNHPHVIKLYGACSQ-----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAW 157 (314)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHH
T ss_pred CCCCceeeEEEEEec-----CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHH
Confidence 479999999998543 5678999999999999999875432 113489999999999
Q ss_pred HHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCcccc
Q 042634 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGD 310 (427)
Q Consensus 239 ~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~D 310 (427)
|++.||+||| +.||+||||||+||+++.++.+||+|||+++..... ..++..|+|||.+.+..++.++|
T Consensus 158 qi~~~l~~lH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 234 (314)
T 2ivs_A 158 QISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD 234 (314)
T ss_dssp HHHHHHHHHH---HTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHH
T ss_pred HHHHHHHHHH---HCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhh
Confidence 9999999999 899999999999999999999999999999865332 25667899999999888999999
Q ss_pred chhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHH
Q 042634 311 VYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSV 389 (427)
Q Consensus 311 iwS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (427)
||||||++|||++ |..||.+... ..+...+...... ..+..++.++
T Consensus 235 i~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~~ 281 (314)
T 2ivs_A 235 VWSFGVLLWEIVTLGGNPYPGIPP--ERLFNLLKTGHRM-------------------------------ERPDNCSEEM 281 (314)
T ss_dssp HHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCC-------------------------------CCCTTCCHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHhhcCCcC-------------------------------CCCccCCHHH
Confidence 9999999999999 9999975421 1121111111000 0112345678
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 042634 390 LGIGVTCSSELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 390 ~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
.+++.+||+.||++|||++|+++.|+++..+
T Consensus 282 ~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 282 YRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998654
No 48
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=293.37 Aligned_cols=189 Identities=22% Similarity=0.316 Sum_probs=148.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++||||+++|+|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 65 l~hpnIv~l~~~~~~-----~~~~~lv~E~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~givHr 132 (347)
T 3zgw_A 65 LRHQHICQLYHVLET-----ANKIFMVLEYCPGGELFDYIISQ----DRLSEEETRVVFRQIVSAVAYVH---SQGYAHR 132 (347)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCC
T ss_pred CCCCCEeeEEEEEEe-----CCEEEEEEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeC
Confidence 469999999998543 56789999999999999998654 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++.++.+||+|||+|...... ..||+.|+|||++.+..+ +.++||||+||++|||++|..||.+
T Consensus 133 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 212 (347)
T 3zgw_A 133 DLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212 (347)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBC--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CccHHHEEEcCCCCEEEEeccCcccccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999998765332 268999999999988876 8999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.. ............. + .+...+.++.+++.+||+.||++|||++|+
T Consensus 213 ~~-----~~~~~~~i~~~~~----~-------------------------~p~~~s~~~~~li~~~L~~dP~~Rps~~ei 258 (347)
T 3zgw_A 213 DN-----VMALYKKIMRGKY----D-------------------------VPKWLSPSSILLLQQMLQVDPKKRISMKNL 258 (347)
T ss_dssp SS-----HHHHHHHHHHTCC----C-------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CC-----HHHHHHHHHcCCC----C-------------------------CCCCCCHHHHHHHHHHcccCHhHCcCHHHH
Confidence 31 1111111110000 0 111134457889999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
++.
T Consensus 259 l~h 261 (347)
T 3zgw_A 259 LNH 261 (347)
T ss_dssp HTC
T ss_pred hcC
Confidence 864
No 49
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.5e-37 Score=304.45 Aligned_cols=197 Identities=24% Similarity=0.426 Sum_probs=160.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++. ....++||||+++|+|.+++..... ..+++..++.++.||+.||+||| ++||+||
T Consensus 240 l~h~~iv~l~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHr 308 (454)
T 1qcf_A 240 LQHDKLVKLHAVVT------KEPIYIITEFMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIE---QRNYIHR 308 (454)
T ss_dssp CCCTTBCCEEEEEC------SSSCEEEECCCTTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEEe------CCccEEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccCC
Confidence 57999999998853 3467999999999999999976533 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+|||++.++.+||+|||+|+..... ..++..|+|||++....++.++|||||||++|||++ |+.||.+
T Consensus 309 Dlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~ 388 (454)
T 1qcf_A 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388 (454)
T ss_dssp SCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999876432 255678999999988899999999999999999999 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+..... ...+..++.++.++|.+||+.||++|||+++|
T Consensus 389 ~~~--~~~~~~i~~~~~-------------------------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i 435 (454)
T 1qcf_A 389 MSN--PEVIRALERGYR-------------------------------MPRPENCPEELYNIMMRCWKNRPEERPTFEYI 435 (454)
T ss_dssp CCH--HHHHHHHHHTCC-------------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCH--HHHHHHHHcCCC-------------------------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 421 111111111100 00123456779999999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 411 AAQLLSFRN 419 (427)
Q Consensus 411 ~~~L~~~~~ 419 (427)
++.|+.+..
T Consensus 436 ~~~L~~~~~ 444 (454)
T 1qcf_A 436 QSVLDDFYT 444 (454)
T ss_dssp HHHHHTSSS
T ss_pred HHHHHHHHh
Confidence 999998753
No 50
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.9e-37 Score=288.98 Aligned_cols=192 Identities=21% Similarity=0.315 Sum_probs=154.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++|+|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 62 l~hpnIv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~givH~ 129 (323)
T 3tki_A 62 LNHENVVKFYGHRRE-----GNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129 (323)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCCCeEEEEEec-----CCeEEEEEEcCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 579999999998543 56789999999999999999765 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++.... ...||..|+|||++.+..+ +.++||||+||++|||++|+.||.
T Consensus 130 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 209 (323)
T 3tki_A 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209 (323)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCS
T ss_pred ccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999986532 2378999999999988775 789999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
........+..+...... .. .....+.++.+++.+||+.||++|||++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~------~~-------------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e 258 (323)
T 3tki_A 210 QPSDSCQEYSDWKEKKTY------LN-------------------------PWKKIDSAPLALLHKILVENPSARITIPD 258 (323)
T ss_dssp SSCTTSHHHHHHHTTCTT------ST-------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred CCchHHHHHHHHhccccc------CC-------------------------ccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 643322222111111000 00 11223456789999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
+++.
T Consensus 259 il~h 262 (323)
T 3tki_A 259 IKKD 262 (323)
T ss_dssp HTTC
T ss_pred HhhC
Confidence 9763
No 51
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.7e-37 Score=295.53 Aligned_cols=200 Identities=24% Similarity=0.398 Sum_probs=161.6
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
+||||+++++.+.. ....++||||+++|+|.+++..... ....+++..++.++.|++.||+||
T Consensus 133 ~hpnIv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 207 (382)
T 3tt0_A 133 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 207 (382)
T ss_dssp CCTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCchhhhheeeecc-----CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence 79999999998644 5678999999999999999865421 113489999999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| +.||+||||||+|||++.++.+||+|||+|+..... ..++..|+|||++.+..++.++|||||||++|
T Consensus 208 H---~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ 284 (382)
T 3tt0_A 208 A---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 284 (382)
T ss_dssp H---HTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred H---hCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHH
Confidence 9 899999999999999999999999999999865432 25677899999999999999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
||++ |..||.... ...+.+.+...... ..+..++.++.+++.+||+
T Consensus 285 ellt~g~~p~~~~~--~~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~ 331 (382)
T 3tt0_A 285 EIFTLGGSPYPGVP--VEELFKLLKEGHRM-------------------------------DKPSNCTNELYMMMRDCWH 331 (382)
T ss_dssp HHHTTSCCSSTTCC--HHHHHHHHHTTCCC-------------------------------CCCSSCCHHHHHHHHHHTC
T ss_pred HHHhCCCCCCCCCC--HHHHHHHHHcCCCC-------------------------------CCCccCCHHHHHHHHHHcC
Confidence 9999 999997531 11111111111000 0112245678999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
.||++|||++||++.|+++...
T Consensus 332 ~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 332 AVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHH
T ss_pred CChhhCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999764
No 52
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-37 Score=293.47 Aligned_cols=204 Identities=23% Similarity=0.340 Sum_probs=159.8
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh-------------------hhccCHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA-------------------LKNLNLLQRLSIAVDV 240 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~l~~~~~~~~~~~i 240 (427)
+||||+++++.+.. ....++||||+++|+|.+++...... ...+++..++.++.|+
T Consensus 107 ~hp~iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 181 (344)
T 1rjb_A 107 SHENIVNLLGACTL-----SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQV 181 (344)
T ss_dssp CCTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHH
T ss_pred CCCCeeeEEEEEee-----CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHH
Confidence 79999999998644 56789999999999999998754321 1347899999999999
Q ss_pred HHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccch
Q 042634 241 ASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVY 312 (427)
Q Consensus 241 ~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~Diw 312 (427)
+.||+||| +.||+||||||+||+++.++.+||+|||+++...... .+|..|+|||++.+..++.++|||
T Consensus 182 ~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~ 258 (344)
T 1rjb_A 182 AKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW 258 (344)
T ss_dssp HHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred HHHHHHHH---hCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHH
Confidence 99999999 8999999999999999999999999999998654322 456789999999888999999999
Q ss_pred hHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHH
Q 042634 313 SFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLG 391 (427)
Q Consensus 313 S~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (427)
||||++|||++ |..||.+.... ..+...+....... .+..++.++.+
T Consensus 259 slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~-------------------------------~~~~~~~~l~~ 306 (344)
T 1rjb_A 259 SYGILLWEIFSLGVNPYPGIPVD-ANFYKLIQNGFKMD-------------------------------QPFYATEEIYI 306 (344)
T ss_dssp HHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHTTCCCC-------------------------------CCTTCCHHHHH
T ss_pred HHHHHHHHHHcCCCCCcccCCcH-HHHHHHHhcCCCCC-------------------------------CCCCCCHHHHH
Confidence 99999999998 99999764221 11212211111000 11223567899
Q ss_pred HHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 042634 392 IGVTCSSELPRERMNMEEVAAQLLSFRNKLVK 423 (427)
Q Consensus 392 l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~~~~ 423 (427)
++.+||+.||++|||++|+++.|+.+......
T Consensus 307 li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 307 IMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998765543
No 53
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.8e-36 Score=282.94 Aligned_cols=223 Identities=18% Similarity=0.229 Sum_probs=164.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+... .....++||||+++++|.+++...... ..+++..++.++.|++.||+||| +.||+||
T Consensus 64 l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~ 136 (319)
T 4euu_A 64 LNHKNIVKLFAIEEET---TTRHKVLIMEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLR---ENGIVHR 136 (319)
T ss_dssp CCCTTBCCEEEEEECT---TTCCEEEEEECCTTCBHHHHHHSGGGT-TCCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred cCCCCcceEEEEeecC---CCceEEEEEeCCCCCCHHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEecC
Confidence 4699999999875431 234679999999999999999765321 33899999999999999999999 8999999
Q ss_pred cccCCceee----CCCCceEecccccccccCCcC-----CCccccccccccC--------CCCcCccccchhHHHHHHHH
Q 042634 259 DLKPSNVLL----DGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGM--------GSEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 259 Dlkp~NIll----~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~--------~~~~~~~~DiwS~G~vl~el 321 (427)
||||+||++ +.++.+||+|||+|+...... .||..|+|||++. +..++.++|||||||++|||
T Consensus 137 Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el 216 (319)
T 4euu_A 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216 (319)
T ss_dssp CCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHH
T ss_pred CCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHH
Confidence 999999999 788899999999998764432 6889999999986 57789999999999999999
Q ss_pred HhCCCCCCcccCCCccHHHHHHHh---ccc-chhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcC
Q 042634 322 FTGKRPTNEMFTGNLTLHNFVKEA---LPE-RLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCS 397 (427)
Q Consensus 322 l~g~~pf~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 397 (427)
++|+.||......... ...+... .+. .+........ ... .+... ...........+..+.+++.+||
T Consensus 217 ~~g~~pf~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~------~~~-~~~~~-~~~~~~~~~~~~~~l~~ll~~~L 287 (319)
T 4euu_A 217 ATGSLPFRPFEGPRRN-KEVMYKIITGKPSGAISGVQKAEN------GPI-DWSGD-MPVSCSLSRGLQVLLTPVLANIL 287 (319)
T ss_dssp HHSSCSEECTTCGGGC-HHHHHHHHHHCCTTCCEEEECSTT------CCE-EEESS-CCTTCSSCHHHHHHHHHHHHHHS
T ss_pred HhCCCCCCCCCccchh-HHHHHHHhcCCCcccchhhhcccC------Ccc-ccCcc-CCcccccchhHHHHhHHHHHHhc
Confidence 9999999754322221 1222211 111 1111111000 000 00000 00112234677889999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHH
Q 042634 398 SELPRERMNMEEVAAQLLSF 417 (427)
Q Consensus 398 ~~dP~~Rpt~~ev~~~L~~~ 417 (427)
+.||++|||++|+++...+-
T Consensus 288 ~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 288 EADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp CCCTTTSCCHHHHHHHHHHH
T ss_pred cCChhhhccHHHhhhccHHH
Confidence 99999999999999998764
No 54
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.7e-37 Score=293.11 Aligned_cols=208 Identities=20% Similarity=0.233 Sum_probs=161.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+... +.+....++||||+ +++|.+++.... .+++..++.++.||+.||+||| +.||+||
T Consensus 105 l~h~ni~~~~~~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 175 (345)
T 2v62_A 105 LDYLGIPLFYGSGLTE-FKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIH---ENEYVHG 175 (345)
T ss_dssp CSCCCCCCEEEEEEEE-SSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred ccccCcceeecccccc-cCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeCC
Confidence 5799999999986542 23456789999999 999999997653 5999999999999999999999 8899999
Q ss_pred cccCCceeeCCCC--ceEecccccccccCC-------------cCCCccccccccccCCCCcCccccchhHHHHHHHHHh
Q 042634 259 DLKPSNVLLDGEL--TAHVGDFGLAKFLPE-------------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 259 Dlkp~NIll~~~~--~~kL~DFG~a~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~ 323 (427)
||||+||+++.++ .+||+|||+|+.... ...||..|+|||++.+..++.++|||||||++|||++
T Consensus 176 Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~ 255 (345)
T 2v62_A 176 DIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLC 255 (345)
T ss_dssp CCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh
Confidence 9999999998877 999999999976532 2268899999999999999999999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|+.||................ ........+.... ....++.++.+++.+||+.||++
T Consensus 256 g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------------------~~~~~~~~l~~li~~~l~~dp~~ 312 (345)
T 2v62_A 256 GKLPWEQNLKDPVAVQTAKTN-LLDELPQSVLKWA----------------------PSGSSCCEIAQFLVCAHSLAYDE 312 (345)
T ss_dssp SSCTTGGGTTCHHHHHHHHHH-HHHTTTHHHHHHS----------------------CTTSCCHHHHHHHHHHHTCCTTC
T ss_pred CCCCccccccccHHHHHHHHh-hcccccHHHHhhc----------------------cccccHHHHHHHHHHHhhcCccc
Confidence 999996532222212111111 1111100000000 01134567999999999999999
Q ss_pred CCCHHHHHHHHHHHH
Q 042634 404 RMNMEEVAAQLLSFR 418 (427)
Q Consensus 404 Rpt~~ev~~~L~~~~ 418 (427)
|||++||++.|+++.
T Consensus 313 Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 313 KPNYQALKKILNPHG 327 (345)
T ss_dssp CCCHHHHHHHHCTTC
T ss_pred CCCHHHHHHHHhccC
Confidence 999999999998753
No 55
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1e-36 Score=283.03 Aligned_cols=198 Identities=24% Similarity=0.436 Sum_probs=160.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.... ..+++..++.++.|++.||+||| ++||+||
T Consensus 76 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~ 144 (283)
T 3gen_A 76 LSHEKLVQLYGVCTK-----QRPIFIITEYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144 (283)
T ss_dssp CCCTTBCCEEEEECS-----SSSEEEEECCCTTCBHHHHHHCGG---GCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEEec-----CCCeEEEEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH---HCCccCC
Confidence 469999999998543 567899999999999999997643 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++||||+||++|||++ |+.||..
T Consensus 145 dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~ 224 (283)
T 3gen_A 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224 (283)
T ss_dssp SCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 99999999999999999999999865432 256778999999998899999999999999999998 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+...... ..+..++..+.+++.+||+.||++|||++|+
T Consensus 225 ~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 271 (283)
T 3gen_A 225 FTN--SETAEHIAQGLRL-------------------------------YRPHLASEKVYTIMYSCWHEKADERPTFKIL 271 (283)
T ss_dssp SCH--HHHHHHHHTTCCC-------------------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred cCh--hHHHHHHhcccCC-------------------------------CCCCcCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 321 1111111110000 0111234568899999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 411 AAQLLSFRNK 420 (427)
Q Consensus 411 ~~~L~~~~~~ 420 (427)
++.|+++.++
T Consensus 272 l~~L~~~~~~ 281 (283)
T 3gen_A 272 LSNILDVMDE 281 (283)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhc
Confidence 9999998764
No 56
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.2e-36 Score=284.59 Aligned_cols=200 Identities=23% Similarity=0.396 Sum_probs=159.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. .+...++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||
T Consensus 83 l~h~~iv~~~~~~~~----~~~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~ 152 (298)
T 3f66_A 83 FSHPNVLSLLGICLR----SEGSPLVVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLA---SKKFVHR 152 (298)
T ss_dssp CCCTTBCCCCEEECC----SSSCCEEEEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeeeeEEEc----CCCceEEEEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCccCC
Confidence 469999999997533 2456789999999999999996543 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~p 327 (427)
||||+||+++.++.+||+|||.|+..... ..+|..|+|||.+.+..++.++||||+||++|||++ |.+|
T Consensus 153 dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 232 (298)
T 3f66_A 153 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 232 (298)
T ss_dssp CCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred CCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999865332 256678999999999999999999999999999999 5566
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|...... ........... ...+..++.++.+++.+||+.||++|||+
T Consensus 233 ~~~~~~~--~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 279 (298)
T 3f66_A 233 YPDVNTF--DITVYLLQGRR-------------------------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSF 279 (298)
T ss_dssp STTSCTT--THHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CccCCHH--HHHHHHhcCCC-------------------------------CCCCccCCHHHHHHHHHHcCCChhhCcCH
Confidence 6543211 11111111000 00112234568999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 042634 408 EEVAAQLLSFRNKL 421 (427)
Q Consensus 408 ~ev~~~L~~~~~~~ 421 (427)
+|+++.|+++...+
T Consensus 280 ~ell~~L~~~~~~~ 293 (298)
T 3f66_A 280 SELVSRISAIFSTF 293 (298)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 57
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.7e-36 Score=285.77 Aligned_cols=208 Identities=24% Similarity=0.383 Sum_probs=157.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccch--hhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNR--EALKNLNLLQRLSIAVDVASALDYLHHYCETPIV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~iv 256 (427)
++||||+++++.+......+....++||||+++|+|.+++.... .....+++..++.++.|++.||.||| +.||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~iv 169 (313)
T 3brb_A 93 FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFL 169 (313)
T ss_dssp CCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCC
T ss_pred CCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 46999999999876543333345699999999999999884321 11245899999999999999999999 89999
Q ss_pred eccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCC
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRP 327 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~p 327 (427)
||||||+||+++.++.+||+|||+++..... ..++..|+|||.+.+..++.++|||||||++|||++ |..|
T Consensus 170 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 249 (313)
T 3brb_A 170 HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249 (313)
T ss_dssp CCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999865432 256778999999999999999999999999999999 8899
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|..... ............. ..+..++.++.+++.+||+.||++|||+
T Consensus 250 ~~~~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~ 296 (313)
T 3brb_A 250 YPGVQN--HEMYDYLLHGHRL-------------------------------KQPEDCLDELYEIMYSCWRTDPLDRPTF 296 (313)
T ss_dssp STTCCG--GGHHHHHHTTCCC-------------------------------CCBTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred CccCCH--HHHHHHHHcCCCC-------------------------------CCCccccHHHHHHHHHHcCCChhhCcCH
Confidence 875321 1111111111000 0112345678999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 042634 408 EEVAAQLLSFRNKLV 422 (427)
Q Consensus 408 ~ev~~~L~~~~~~~~ 422 (427)
+|+++.|+++.++++
T Consensus 297 ~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 297 SVLRLQLEKLLESLP 311 (313)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999988764
No 58
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=5.7e-37 Score=285.76 Aligned_cols=200 Identities=26% Similarity=0.408 Sum_probs=151.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ....++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 77 l~h~~iv~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~ 144 (289)
T 3og7_A 77 TRHVNILLFMGYST------APQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144 (289)
T ss_dssp CCCTTBCCEEEEEC------SSSCEEEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCcEEEEEeecc------CCccEEEEEecCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 46999999988532 346799999999999999986554 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccC---CCCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++.+||+|||+++.... ...|+..|+|||++. +..++.++|||||||++|||++|+.|
T Consensus 145 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 224 (289)
T 3og7_A 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224 (289)
T ss_dssp CCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCT
T ss_pred cCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999976532 126889999999986 56788999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHh-cccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 328 TNEMFTGNLTLHNFVKEA-LPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
|....... .+...+... ....... ....++.++.+++.+||+.||++|||
T Consensus 225 ~~~~~~~~-~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~l~~li~~~l~~~p~~Rps 275 (289)
T 3og7_A 225 YSNINNRD-QIIEMVGRGSLSPDLSK----------------------------VRSNCPKRMKRLMAECLKKKRDERPS 275 (289)
T ss_dssp TSSCCCHH-HHHHHHHHTSCCCCTTS----------------------------SCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred ccccchHH-HHHHHhcccccCcchhh----------------------------ccccCCHHHHHHHHHHccCChhhCCC
Confidence 97642211 111111111 1111000 11234567899999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 042634 407 MEEVAAQLLSFRN 419 (427)
Q Consensus 407 ~~ev~~~L~~~~~ 419 (427)
++|+++.|+++.+
T Consensus 276 ~~ell~~L~~l~~ 288 (289)
T 3og7_A 276 FPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998753
No 59
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6e-37 Score=288.64 Aligned_cols=205 Identities=23% Similarity=0.376 Sum_probs=163.9
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh--------------hhccCHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA--------------LKNLNLLQRLSIAVDVASALD 245 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~--------------~~~l~~~~~~~~~~~i~~~L~ 245 (427)
+||||+++++.+.. ....++||||+++|+|.+++...... ...+++..++.++.|++.||+
T Consensus 85 ~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~ 159 (313)
T 1t46_A 85 NHMNIVNLLGACTI-----GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA 159 (313)
T ss_dssp CCTTBCCEEEEECS-----SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCeeeEEEEEec-----CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 79999999998644 56789999999999999998654311 124899999999999999999
Q ss_pred HHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHH
Q 042634 246 YLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGIL 317 (427)
Q Consensus 246 ~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~v 317 (427)
||| +.||+||||||+||+++.++.+||+|||+++...... .++..|+|||++.+..++.++|||||||+
T Consensus 160 ~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 236 (313)
T 1t46_A 160 FLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 236 (313)
T ss_dssp HHH---HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHH---HCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHH
Confidence 999 8999999999999999999999999999998764432 45668999999998999999999999999
Q ss_pred HHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhc
Q 042634 318 LLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTC 396 (427)
Q Consensus 318 l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c 396 (427)
+|||++ |+.||....... ............ ..+..++.++.+++.+|
T Consensus 237 l~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~ 284 (313)
T 1t46_A 237 LWELFSLGSSPYPGMPVDS-KFYKMIKEGFRM-------------------------------LSPEHAPAEMYDIMKTC 284 (313)
T ss_dssp HHHHHTTTCCSSTTCCSSH-HHHHHHHHTCCC-------------------------------CCCTTSCHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCcccchh-HHHHHhccCCCC-------------------------------CCcccCCHHHHHHHHHH
Confidence 999998 999997642211 111111111110 01122356689999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhh
Q 042634 397 SSELPRERMNMEEVAAQLLSFRNKLVKN 424 (427)
Q Consensus 397 l~~dP~~Rpt~~ev~~~L~~~~~~~~~~ 424 (427)
|+.||++|||++|+++.|+++..+...+
T Consensus 285 l~~dp~~Rps~~ell~~L~~~~~~~~~~ 312 (313)
T 1t46_A 285 WDADPLKRPTFKQIVQLIEKQISESTNH 312 (313)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHHTCC-
T ss_pred cCCCchhCcCHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999998775543
No 60
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2e-36 Score=281.59 Aligned_cols=196 Identities=24% Similarity=0.388 Sum_probs=155.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC--ee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP--IV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~--iv 256 (427)
++||||+++++.+.. ..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.| |+
T Consensus 80 l~h~~i~~~~~~~~~-------~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~~~iv 146 (287)
T 4f0f_A 80 LNHPNIVKLYGLMHN-------PPRMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYMQ---NQNPPIV 146 (287)
T ss_dssp CCCTTBCCEEEEETT-------TTEEEEECCTTCBHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHH---TSSSCCB
T ss_pred CCCCCchhhheeecC-------CCeEEEEecCCCCHHHHHhccc---CCccHHHHHHHHHHHHHHHHHHH---hCCCCee
Confidence 469999999998533 2379999999999988886543 45899999999999999999999 888 99
Q ss_pred eccccCCceeeCCCCc-----eEecccccccccCCc---CCCccccccccccC--CCCcCccccchhHHHHHHHHHhCCC
Q 042634 257 HCDLKPSNVLLDGELT-----AHVGDFGLAKFLPEA---TNNFFNFQIAEYGM--GSEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 257 HrDlkp~NIll~~~~~-----~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~--~~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
||||||+||+++.++. +||+|||+++..... ..++..|+|||++. ...++.++||||+||++|||++|+.
T Consensus 147 H~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 226 (287)
T 4f0f_A 147 HRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226 (287)
T ss_dssp CSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSC
T ss_pred cCCCCcceEEEeccCCCCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCC
Confidence 9999999999987776 999999999865443 37889999999984 4567899999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||................... . ...+..++.++.+++.+||+.||++|||
T Consensus 227 pf~~~~~~~~~~~~~~~~~~~-------~-----------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps 276 (287)
T 4f0f_A 227 PFDEYSYGKIKFINMIREEGL-------R-----------------------PTIPEDCPPRLRNVIELCWSGDPKKRPH 276 (287)
T ss_dssp TTTTCCCCHHHHHHHHHHSCC-------C-----------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCccccccHHHHHHHHhccCC-------C-----------------------CCCCcccCHHHHHHHHHHhcCChhhCcC
Confidence 997643322211111111000 0 0012234567899999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 407 MEEVAAQLLSF 417 (427)
Q Consensus 407 ~~ev~~~L~~~ 417 (427)
++|+++.|+++
T Consensus 277 ~~~ll~~L~~l 287 (287)
T 4f0f_A 277 FSYIVKELSEL 287 (287)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999999864
No 61
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6e-37 Score=296.89 Aligned_cols=189 Identities=22% Similarity=0.288 Sum_probs=149.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++++.. ....++||||+++|+|..++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 110 ~~hp~Iv~l~~~~~~-----~~~~~lV~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH---~~givHr 177 (396)
T 4dc2_A 110 SNHPFLVGLHSCFQT-----ESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLH---ERGIIYR 177 (396)
T ss_dssp TTCTTBCCEEEEEEC-----SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCC
T ss_pred CCCCCcCeeEEEEEE-----CCEEEEEEEcCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEec
Confidence 479999999998543 56789999999999999988654 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 178 DLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~ 257 (396)
T 4dc2_A 178 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 257 (396)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTT
T ss_pred cCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 9999999999999999999999986322 2278999999999999999999999999999999999999997532
Q ss_pred CCCcc---HHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 333 TGNLT---LHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 333 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
..... ....+..... ... ...+...+.++.+++.+||+.||++||++
T Consensus 258 ~~~~~~~~~~~~~~~~i~-------~~~---------------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 258 SSDNPDQNTEDYLFQVIL-------EKQ---------------------IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp C------CCHHHHHHHHH-------HCC---------------------CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred cccccchhhHHHHHHHHh-------ccc---------------------cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11110 0010100000 000 00112235568899999999999999996
No 62
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-37 Score=295.72 Aligned_cols=201 Identities=26% Similarity=0.389 Sum_probs=159.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh---hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE---ALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++||||+++++.+.. ....++||||+++|+|.+++..... ....+++.+++.++.|++.||+||| ++||
T Consensus 131 l~hpnIv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i 202 (367)
T 3l9p_A 131 FNHQNIVRCIGVSLQ-----SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 202 (367)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTC
T ss_pred CCCCCCCeEEEEEec-----CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 479999999998543 5567999999999999999865321 1134889999999999999999999 8999
Q ss_pred eeccccCCceeeCCCC---ceEecccccccccCC--------cCCCccccccccccCCCCcCccccchhHHHHHHHHHh-
Q 042634 256 VHCDLKPSNVLLDGEL---TAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT- 323 (427)
Q Consensus 256 vHrDlkp~NIll~~~~---~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~- 323 (427)
+||||||+|||++.++ .+||+|||+|+.... ...+|+.|+|||++.+..++.++|||||||++|||++
T Consensus 203 vHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~ 282 (367)
T 3l9p_A 203 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 282 (367)
T ss_dssp CCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence 9999999999998554 599999999975421 1256789999999999999999999999999999998
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|..||.... ...+...+..... ...+..++.++.+++.+||+.||++
T Consensus 283 g~~pf~~~~--~~~~~~~i~~~~~-------------------------------~~~~~~~~~~l~~li~~~l~~dP~~ 329 (367)
T 3l9p_A 283 GYMPYPSKS--NQEVLEFVTSGGR-------------------------------MDPPKNCPGPVYRIMTQCWQHQPED 329 (367)
T ss_dssp SCCSSTTCC--HHHHHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred CCCCCCCCC--HHHHHHHHHcCCC-------------------------------CCCCccCCHHHHHHHHHHcCCCHhH
Confidence 999997531 1111111111000 0012234566899999999999999
Q ss_pred CCCHHHHHHHHHHHHHH
Q 042634 404 RMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 404 Rpt~~ev~~~L~~~~~~ 420 (427)
|||++||++.|+.+.+.
T Consensus 330 Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 330 RPNFAIILERIEYCTQD 346 (367)
T ss_dssp SCCHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHhhC
Confidence 99999999999998754
No 63
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-36 Score=287.81 Aligned_cols=194 Identities=22% Similarity=0.290 Sum_probs=155.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 58 l~hpnIv~~~~~~~~-----~~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~givH~ 126 (321)
T 1tki_A 58 ARHRNILHLHESFES-----MEELVMIFEFISGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLH---SHNIGHF 126 (321)
T ss_dssp SCCTTBCCEEEEEEE-----TTEEEEEECCCCCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCeEeEEEec-----CCEEEEEEEeCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcC
Confidence 579999999998644 567899999999999999987543 35899999999999999999999 8999999
Q ss_pred cccCCceeeCC--CCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDG--ELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~--~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++. ++.+||+|||+++...... .+|+.|+|||++.+..++.++||||+||++|||++|..||.+.
T Consensus 127 Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 206 (321)
T 1tki_A 127 DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE 206 (321)
T ss_dssp CCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCC
Confidence 99999999987 7899999999998775443 6889999999999988999999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. ......+...... . ........+.++.+++.+||+.||++|||++|++
T Consensus 207 ~~--~~~~~~i~~~~~~-----------~-----------------~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l 256 (321)
T 1tki_A 207 TN--QQIIENIMNAEYT-----------F-----------------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEAL 256 (321)
T ss_dssp SH--HHHHHHHHHTCCC-----------C-----------------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CH--HHHHHHHHcCCCC-----------C-----------------ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 11 1111111110000 0 0001122456789999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 257 ~h 258 (321)
T 1tki_A 257 QH 258 (321)
T ss_dssp HS
T ss_pred cC
Confidence 74
No 64
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6e-37 Score=282.41 Aligned_cols=201 Identities=21% Similarity=0.264 Sum_probs=158.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC--ee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP--IV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~--iv 256 (427)
++||||+++++.+... .....++||||+++|+|.+++..... ..+++..++.++.|++.||+||| +.| |+
T Consensus 64 l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~ 135 (271)
T 3kmu_A 64 FSHPNVLPVLGACQSP---PAPHPTLITHWMPYGSLYNVLHEGTN--FVVDQSQAVKFALDMARGMAFLH---TLEPLIP 135 (271)
T ss_dssp CSCTTEECEEEEECTT---TSSSCEEEEECCTTCBHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHT---TSSSCCT
T ss_pred cCCCchhheEEEEccC---CCCCeEeeecccCCCcHHHHHhhccc--CCCCHHHHHHHHHHHHHHHHHHh---cCCCcee
Confidence 4699999999986442 13567999999999999999976532 35899999999999999999999 888 99
Q ss_pred eccccCCceeeCCCCceEecccccccccCC-cCCCccccccccccCCCCcCc---cccchhHHHHHHHHHhCCCCCCccc
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPE-ATNNFFNFQIAEYGMGSEVST---SGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~-~~~~~~~y~aPE~~~~~~~~~---~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||||+||+++.++.+||+|||++..... ...+|+.|+|||++.+..++. ++|||||||++|||++|+.||....
T Consensus 136 H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 215 (271)
T 3kmu_A 136 RHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS 215 (271)
T ss_dssp TCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC
T ss_pred cCCCccceEEEcCCcceeEEeccceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence 999999999999999999999888765443 347899999999998765544 7999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
... ............ ..+..++.++.+++.+||+.||++|||++|+++
T Consensus 216 ~~~-~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 216 NME-IGMKVALEGLRP-------------------------------TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp HHH-HHHHHHHSCCCC-------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hHH-HHHHHHhcCCCC-------------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 110 000000000000 012234566899999999999999999999999
Q ss_pred HHHHHHH
Q 042634 413 QLLSFRN 419 (427)
Q Consensus 413 ~L~~~~~ 419 (427)
.|+++.+
T Consensus 264 ~L~~l~~ 270 (271)
T 3kmu_A 264 ILEKMQD 270 (271)
T ss_dssp HHHHHCC
T ss_pred HHHHhhc
Confidence 9998864
No 65
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-37 Score=293.96 Aligned_cols=205 Identities=24% Similarity=0.408 Sum_probs=160.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh--------------------hhhccCHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE--------------------ALKNLNLLQRLSIAV 238 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~~~~ 238 (427)
++||||+++++.+.. +...++||||+++|+|.+++..... ....+++.+++.++.
T Consensus 107 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 181 (343)
T 1luf_A 107 FDNPNIVKLLGVCAV-----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 181 (343)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHH
T ss_pred CCCCCEEEEEEEEcc-----CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHH
Confidence 479999999998644 5678999999999999999865321 014589999999999
Q ss_pred HHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccCCCCcCcccc
Q 042634 239 DVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGSEVSTSGD 310 (427)
Q Consensus 239 ~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~D 310 (427)
||+.||+||| ++||+||||||+||+++.++.+||+|||+++.... ...++..|+|||++.+..++.++|
T Consensus 182 qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D 258 (343)
T 1luf_A 182 QVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD 258 (343)
T ss_dssp HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHH
T ss_pred HHHHHHHHHH---hCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccc
Confidence 9999999999 89999999999999999999999999999976432 226778899999999889999999
Q ss_pred chhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHH
Q 042634 311 VYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSV 389 (427)
Q Consensus 311 iwS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (427)
||||||++|||++ |..||.+... .+........... ..+..++.++
T Consensus 259 i~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~----------------------------~~~~~~~~~l 305 (343)
T 1luf_A 259 VWAYGVVLWEIFSYGLQPYYGMAH-----EEVIYYVRDGNIL----------------------------ACPENCPLEL 305 (343)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHHHTTCCC----------------------------CCCTTCCHHH
T ss_pred cHHHHHHHHHHHhcCCCcCCCCCh-----HHHHHHHhCCCcC----------------------------CCCCCCCHHH
Confidence 9999999999999 9999975311 1111111000000 0122345678
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHhh
Q 042634 390 LGIGVTCSSELPRERMNMEEVAAQLLSFRNKLVKN 424 (427)
Q Consensus 390 ~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~~~~~ 424 (427)
.+++.+||+.||++|||++|+++.|+++.++...+
T Consensus 306 ~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~~ 340 (343)
T 1luf_A 306 YNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGT 340 (343)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-----
T ss_pred HHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhhh
Confidence 99999999999999999999999999997766443
No 66
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=7.6e-37 Score=305.82 Aligned_cols=197 Identities=23% Similarity=0.393 Sum_probs=161.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++||||+++|+|.+++..... ..+++..++.++.||+.||+||| ++||+||
T Consensus 273 l~hpniv~l~~~~~~-----~~~~~lv~E~~~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHr 342 (495)
T 1opk_A 273 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE---KKNFIHR 342 (495)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred cCCCCEeeEEEEEec-----CCcEEEEEEccCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 579999999998654 4578999999999999999975332 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+|||++.++.+||+|||+++...... .++..|+|||++....++.++|||||||++|||++ |..||.+
T Consensus 343 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~ 422 (495)
T 1opk_A 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 422 (495)
T ss_dssp CCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998764322 45678999999998899999999999999999999 9999976
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ..+.+.+..... ...+..++.++.++|.+||+.||++|||++||
T Consensus 423 ~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el 469 (495)
T 1opk_A 423 IDL--SQVYELLEKDYR-------------------------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469 (495)
T ss_dssp CCG--GGHHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCH--HHHHHHHHcCCC-------------------------------CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence 421 111111111100 00223456778999999999999999999999
Q ss_pred HHHHHHHH
Q 042634 411 AAQLLSFR 418 (427)
Q Consensus 411 ~~~L~~~~ 418 (427)
++.|+.+.
T Consensus 470 ~~~L~~~~ 477 (495)
T 1opk_A 470 HQAFETMF 477 (495)
T ss_dssp HHHHHTSC
T ss_pred HHHHHHHH
Confidence 99998873
No 67
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.4e-36 Score=282.46 Aligned_cols=204 Identities=15% Similarity=0.175 Sum_probs=161.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+|++++++++.+.. ....++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++||+||
T Consensus 63 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 130 (298)
T 1csn_A 63 AGCTGIPNVYYFGQE-----GLHNVLVIDLL-GPSLEDLLDLCG---RKFSVKTVAMAAKQMLARVQSIH---EKSLVYR 130 (298)
T ss_dssp TTCTTCCCEEEEEEE-----TTEEEEEEECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---TTTEECC
T ss_pred hcCCCCCeEEeecCC-----CceeEEEEEec-CCCHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCEecC
Confidence 368999998887533 56789999999 999999997543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCc-----eEecccccccccCCc-------------CCCccccccccccCCCCcCccccchhHHHHHHH
Q 042634 259 DLKPSNVLLDGELT-----AHVGDFGLAKFLPEA-------------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLE 320 (427)
Q Consensus 259 Dlkp~NIll~~~~~-----~kL~DFG~a~~~~~~-------------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~e 320 (427)
||||+||+++.++. +||+|||+|+..... ..||..|+|||++.+..++.++|||||||++||
T Consensus 131 Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e 210 (298)
T 1csn_A 131 DIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMY 210 (298)
T ss_dssp CCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred CCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHH
Confidence 99999999987765 999999999865432 258899999999999999999999999999999
Q ss_pred HHhCCCCCCcccCCCcc--HHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 321 TFTGKRPTNEMFTGNLT--LHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 321 ll~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
|++|+.||......... +........+..... ....++.++.+++.+||+
T Consensus 211 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~l~~li~~~l~ 262 (298)
T 1csn_A 211 FLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE----------------------------LCAGFPEEFYKYMHYARN 262 (298)
T ss_dssp HHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH----------------------------HTTTSCHHHHHHHHHHHH
T ss_pred HHcCCCCcchhhccccHHHHHHHHhhccCccHHH----------------------------HHhhCcHHHHHHHHHHhc
Confidence 99999999864322110 111111100000000 011245678999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRNKLV 422 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~~~ 422 (427)
.||++|||++||++.|+++.+++.
T Consensus 263 ~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 263 LAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CCcccCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999987653
No 68
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.1e-36 Score=294.61 Aligned_cols=201 Identities=19% Similarity=0.255 Sum_probs=153.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++++... +.+....++|||||++|+|.+++..... ..+++..++.++.||+.||+||| +.||+||
T Consensus 112 ~~hp~iv~l~~~~~~~-~~~~~~~~lv~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHr 185 (400)
T 1nxk_A 112 SQCPHIVRIVDVYENL-YAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLH---SINIAHR 185 (400)
T ss_dssp TTSTTBCCEEEEEEEE-ETTEEEEEEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred cCCCCcceEeEEEeec-ccCCcEEEEEEEeCCCCcHHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 5799999999986432 2234568999999999999999976532 45999999999999999999999 8999999
Q ss_pred cccCCceeeCC---CCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDG---ELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~---~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+|||++. ++.+||+|||+++..... ..||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 186 Dlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 265 (400)
T 1nxk_A 186 DVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265 (400)
T ss_dssp CCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCC
Confidence 99999999987 789999999999876432 2678999999999999999999999999999999999999976
Q ss_pred ccCCCc--cHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 331 MFTGNL--TLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 331 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
...... .....+...... . .......++.++.+++++||+.||++|||++
T Consensus 266 ~~~~~~~~~~~~~i~~~~~~----~------------------------~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ 317 (400)
T 1nxk_A 266 NHGLAISPGMKTRIRMGQYE----F------------------------PNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 317 (400)
T ss_dssp CTTCSSCCSHHHHHHHTCCC----C------------------------CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred CccccccHHHHHHHHcCccc----C------------------------CCcccccCCHHHHHHHHHHCCCChhHCcCHH
Confidence 432211 111111110000 0 0001122456689999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|++++
T Consensus 318 eil~h 322 (400)
T 1nxk_A 318 EFMNH 322 (400)
T ss_dssp HHHHS
T ss_pred HHhcC
Confidence 99875
No 69
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.7e-36 Score=288.21 Aligned_cols=189 Identities=20% Similarity=0.259 Sum_probs=153.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.||+.||+||| ++||+||
T Consensus 62 l~hp~iv~l~~~~~~-----~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHr 129 (337)
T 1o6l_A 62 TRHPFLTALKYAFQT-----HDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALEYLH---SRDVVYR 129 (337)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCC
T ss_pred CCCCcCcceEEEEEe-----CCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 479999999988543 56789999999999999988643 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|+|||++.+..++.++||||+||++|||++|+.||.+..
T Consensus 130 Dlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 209 (337)
T 1o6l_A 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209 (337)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC
Confidence 9999999999999999999999986422 2268899999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NM 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~ 407 (427)
............. . .+...+.++.+++.+||+.||++|| |+
T Consensus 210 -----~~~~~~~i~~~~~------------------------~-----~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~ 255 (337)
T 1o6l_A 210 -----HERLFELILMEEI------------------------R-----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255 (337)
T ss_dssp -----HHHHHHHHHHCCC------------------------C-----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTH
T ss_pred -----HHHHHHHHHcCCC------------------------C-----CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCH
Confidence 1111111110000 0 1112345688999999999999999 89
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|++++
T Consensus 256 ~ei~~h 261 (337)
T 1o6l_A 256 KEVMEH 261 (337)
T ss_dssp HHHHTS
T ss_pred HHHHcC
Confidence 998764
No 70
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.3e-36 Score=286.42 Aligned_cols=215 Identities=21% Similarity=0.269 Sum_probs=164.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC-----CC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC-----ET 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~-----~~ 253 (427)
++||||+++++.+.... ......++||||+++|+|.+++.. ..+++..++.++.|++.||+|||... +.
T Consensus 93 l~h~ni~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~ 166 (342)
T 1b6c_B 93 LRHENILGFIAADNKDN-GTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166 (342)
T ss_dssp CCCTTBCCEEEEEECCC-SSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC
T ss_pred cCCCcEEEEEeeecccC-CccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 67999999999864421 111367999999999999999854 34899999999999999999999311 36
Q ss_pred CeeeccccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCCC------CcCccccchhHHHH
Q 042634 254 PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMGS------EVSTSGDVYSFGIL 317 (427)
Q Consensus 254 ~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~~------~~~~~~DiwS~G~v 317 (427)
||+||||||+||+++.++.+||+|||+++..... ..||..|+|||++.+. .++.++|||||||+
T Consensus 167 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~i 246 (342)
T 1b6c_B 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 246 (342)
T ss_dssp EEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHH
T ss_pred CeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHH
Confidence 8999999999999999999999999999765332 2688999999998775 34578999999999
Q ss_pred HHHHHhC----------CCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHH
Q 042634 318 LLETFTG----------KRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLV 387 (427)
Q Consensus 318 l~ell~g----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (427)
+|||++| ..||............+............+ .......+++.
T Consensus 247 l~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~ 304 (342)
T 1b6c_B 247 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI----------------------PNRWQSCEALR 304 (342)
T ss_dssp HHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCC----------------------CGGGGTSHHHH
T ss_pred HHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCC----------------------cccccchhHHH
Confidence 9999999 677765433333333332221111100000 00112345778
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHH
Q 042634 388 SVLGIGVTCSSELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 388 ~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
.+.+++.+||+.||++|||++||++.|+++.++.
T Consensus 305 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 305 VMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999998764
No 71
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=288.47 Aligned_cols=197 Identities=20% Similarity=0.356 Sum_probs=156.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ...++++||+.+|+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 74 l~hp~iv~~~~~~~~------~~~~~v~~~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 141 (327)
T 3lzb_A 74 VDNPHVCRLLGICLT------STVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHR 141 (327)
T ss_dssp CCBTTBCCCCEEEES------SSEEEEECCCSSCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCeeEEEEEEec------CCceEEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHh---hCCCcCC
Confidence 469999999998643 34789999999999999986543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~ 329 (427)
||||+||+++.++.+||+|||+|+...... .++..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 142 Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 221 (327)
T 3lzb_A 142 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp CCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred CCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCC
Confidence 999999999999999999999998754322 55678999999999999999999999999999999 999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+... ..+...+...... ..+..++.++.+++.+||+.||++|||++|
T Consensus 222 ~~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 268 (327)
T 3lzb_A 222 GIPA--SEISSILEKGERL-------------------------------PQPPICTIDVYMIMRKCWMIDADSRPKFRE 268 (327)
T ss_dssp TCCG--GGHHHHHHTTCCC-------------------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCH--HHHHHHHHcCCCC-------------------------------CCCccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence 6422 1122221111100 011224556899999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 410 VAAQLLSFRNK 420 (427)
Q Consensus 410 v~~~L~~~~~~ 420 (427)
+++.|+++.+.
T Consensus 269 ll~~L~~~~~~ 279 (327)
T 3lzb_A 269 LIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHhC
Confidence 99999999754
No 72
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.2e-37 Score=283.69 Aligned_cols=194 Identities=26% Similarity=0.378 Sum_probs=149.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC---e
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP---I 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~---i 255 (427)
++||||+++++.+.. ....++||||+++++|.+++.. ..+++..+..++.|++.||+||| +.| |
T Consensus 63 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i 129 (271)
T 3dtc_A 63 LKHPNIIALRGVCLK-----EPNLCLVMEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLH---DEAIVPI 129 (271)
T ss_dssp CCCTTBCCEEEEECC-----C--CEEEEECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCC
T ss_pred cCCCCEeeEEEEEec-----CCceEEEEEcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCCCce
Confidence 569999999998644 5678999999999999998864 34899999999999999999999 677 9
Q ss_pred eeccccCCceeeCC--------CCceEecccccccccCCc----CCCccccccccccCCCCcCccccchhHHHHHHHHHh
Q 042634 256 VHCDLKPSNVLLDG--------ELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 256 vHrDlkp~NIll~~--------~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~ 323 (427)
+||||||+||+++. ++.+||+|||.++..... ..++..|+|||.+.+..++.++|||||||++|||++
T Consensus 130 ~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 209 (271)
T 3dtc_A 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT 209 (271)
T ss_dssp CCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH
T ss_pred eecCCchHHEEEecccccccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence 99999999999985 678999999999865433 378899999999998899999999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|+.||...... ........... ....+..++.++.+++.+||+.||++
T Consensus 210 g~~p~~~~~~~-----~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~li~~~l~~~p~~ 257 (271)
T 3dtc_A 210 GEVPFRGIDGL-----AVAYGVAMNKL---------------------------ALPIPSTCPEPFAKLMEDCWNPDPHS 257 (271)
T ss_dssp CCCTTTTSCHH-----HHHHHHHTSCC---------------------------CCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred CCCCCCCCCHH-----HHHHhhhcCCC---------------------------CCCCCcccCHHHHHHHHHHhcCCccc
Confidence 99999753211 00000000000 00012234567899999999999999
Q ss_pred CCCHHHHHHHHHHH
Q 042634 404 RMNMEEVAAQLLSF 417 (427)
Q Consensus 404 Rpt~~ev~~~L~~~ 417 (427)
|||++|++++|+++
T Consensus 258 Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 258 RPSFTNILDQLTTI 271 (271)
T ss_dssp SCCHHHHHHHHHC-
T ss_pred CcCHHHHHHHHhcC
Confidence 99999999999864
No 73
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=9.3e-37 Score=290.09 Aligned_cols=203 Identities=22% Similarity=0.358 Sum_probs=162.1
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh----------hhccCHHHHHHHHHHHHHHHHHHhh
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA----------LKNLNLLQRLSIAVDVASALDYLHH 249 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----------~~~l~~~~~~~~~~~i~~~L~~LH~ 249 (427)
+||||+++++.+.. ....++||||+++|+|.+++...... ...+++..++.++.|++.||+|||
T Consensus 108 ~h~~iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH- 181 (333)
T 2i1m_A 108 QHENIVNLLGACTH-----GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA- 181 (333)
T ss_dssp CCTTBCCEEEEECS-----SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCeeeEEEEEec-----CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh-
Confidence 79999999998644 56789999999999999998754321 134789999999999999999999
Q ss_pred cCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHH
Q 042634 250 YCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 250 ~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~el 321 (427)
+.||+||||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||
T Consensus 182 --~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 259 (333)
T 2i1m_A 182 --SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259 (333)
T ss_dssp --HTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred --cCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999865332 2456789999999988999999999999999999
Q ss_pred Hh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCC
Q 042634 322 FT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 322 l~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 400 (427)
++ |..||.+..... .+........... .+..++.++.+++.+||+.|
T Consensus 260 ~t~g~~p~~~~~~~~-~~~~~~~~~~~~~-------------------------------~~~~~~~~l~~li~~~l~~~ 307 (333)
T 2i1m_A 260 FSLGLNPYPGILVNS-KFYKLVKDGYQMA-------------------------------QPAFAPKNIYSIMQACWALE 307 (333)
T ss_dssp TTTSCCSSTTCCSSH-HHHHHHHHTCCCC-------------------------------CCTTCCHHHHHHHHHHTCSS
T ss_pred HcCCCCCCcccchhH-HHHHHHhcCCCCC-------------------------------CCCCCCHHHHHHHHHHhccC
Confidence 98 999997642211 1112211111100 11123456889999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH
Q 042634 401 PRERMNMEEVAAQLLSFRNKLV 422 (427)
Q Consensus 401 P~~Rpt~~ev~~~L~~~~~~~~ 422 (427)
|++|||++|+++.|+++..+..
T Consensus 308 p~~Rps~~~l~~~L~~~~~~~~ 329 (333)
T 2i1m_A 308 PTHRPTFQQICSFLQEQAQEDR 329 (333)
T ss_dssp GGGSCCHHHHHHHHHHHHHHHH
T ss_pred hhhCcCHHHHHHHHHHHHHhhh
Confidence 9999999999999999977643
No 74
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.3e-36 Score=289.51 Aligned_cols=195 Identities=21% Similarity=0.238 Sum_probs=154.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++|||||++|+|.+++.........+++..+..++.||+.||+||| ++||+||
T Consensus 83 l~hpnIv~~~~~~~~-----~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHr 154 (351)
T 3c0i_A 83 LKHPHIVELLETYSS-----DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHR 154 (351)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCCCcEEEEEEe-----CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 579999999998644 56789999999999999888654433345899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCc---eEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELT---AHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~---~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+|||++.++. +||+|||+++..... ..||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 155 Dlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 234 (351)
T 3c0i_A 155 DVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234 (351)
T ss_dssp CCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCC
Confidence 99999999976554 999999999876432 268999999999999999999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+.. . .......... .... .......+.++.+++.+||+.||++|||+.|
T Consensus 235 ~~~---~---~~~~~i~~~~--------~~~~-----------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e 283 (351)
T 3c0i_A 235 GTK---E---RLFEGIIKGK--------YKMN-----------------PRQWSHISESAKDLVRRMLMLDPAERITVYE 283 (351)
T ss_dssp SSH---H---HHHHHHHHTC--------CCCC-----------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred CcH---H---HHHHHHHcCC--------CCCC-----------------ccccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence 531 1 1111100000 0000 0001123567899999999999999999999
Q ss_pred HHH
Q 042634 410 VAA 412 (427)
Q Consensus 410 v~~ 412 (427)
+++
T Consensus 284 ~l~ 286 (351)
T 3c0i_A 284 ALN 286 (351)
T ss_dssp HHT
T ss_pred Hhc
Confidence 986
No 75
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8e-37 Score=285.51 Aligned_cols=199 Identities=24% Similarity=0.388 Sum_probs=156.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++++|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 68 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 135 (294)
T 4eqm_A 68 LSHQNIVSMIDVDEE-----DDCYYLVMEYIEGPTLSEYIESH----GPLSVDTAINFTNQILDGIKHAH---DMRIVHR 135 (294)
T ss_dssp CCBTTBCCEEEEEEC-----SSEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCCceEEEeeee-----CCeEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 579999999998533 56789999999999999998654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+++..... ..||+.|+|||.+.+..++.++||||+||++|||++|+.||.+.
T Consensus 136 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~ 215 (294)
T 4eqm_A 136 DIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215 (294)
T ss_dssp CCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred CCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999876432 25889999999999999999999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-CHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-NMEEV 410 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-t~~ev 410 (427)
.. ............... .......++..+.+++.+||+.||++|| +++++
T Consensus 216 ~~-----~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l 266 (294)
T 4eqm_A 216 TA-----VSIAIKHIQDSVPNV------------------------TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266 (294)
T ss_dssp CH-----HHHHHHHHSSCCCCH------------------------HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHH
T ss_pred Ch-----HHHHHHHhhccCCCc------------------------chhcccCCCHHHHHHHHHHhcCCHhHccccHHHH
Confidence 21 111111110000000 0001122456789999999999999998 99999
Q ss_pred HHHHHHHH
Q 042634 411 AAQLLSFR 418 (427)
Q Consensus 411 ~~~L~~~~ 418 (427)
.+.|+.+.
T Consensus 267 ~~~l~~~~ 274 (294)
T 4eqm_A 267 KDDLSSVL 274 (294)
T ss_dssp HHHHHTSS
T ss_pred HHHHHHHH
Confidence 99998764
No 76
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-36 Score=281.01 Aligned_cols=202 Identities=23% Similarity=0.372 Sum_probs=160.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. .+...++||||+.+|+|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 79 l~h~~iv~~~~~~~~----~~~~~~~v~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~ 148 (298)
T 3pls_A 79 LNHPNVLALIGIMLP----PEGLPHVLLPYMCHGDLLQFIRSPQ---RNPTVKDLISFGLQVARGMEYLA---EQKFVHR 148 (298)
T ss_dssp CCCTTBCCCCEEECC----SSSCCEEEECCCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCeeeEEEEEec----CCCCcEEEEecccCCCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 469999999998643 2334589999999999999997643 45889999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||.+.+..++.++|||||||++|||++|..|+
T Consensus 149 dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~ 228 (298)
T 3pls_A 149 DLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228 (298)
T ss_dssp CCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred CCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence 99999999999999999999999754321 25678899999999999999999999999999999965554
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.... ............... ..+..++.++.+++.+||+.||++|||++
T Consensus 229 ~~~~-~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 276 (298)
T 3pls_A 229 YRHI-DPFDLTHFLAQGRRL-------------------------------PQPEYCPDSLYQVMQQCWEADPAVRPTFR 276 (298)
T ss_dssp TTTS-CGGGHHHHHHTTCCC-------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CccC-CHHHHHHHhhcCCCC-------------------------------CCCccchHHHHHHHHHHccCChhhCcCHH
Confidence 3321 111222221111100 01122345689999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 042634 409 EVAAQLLSFRNKLV 422 (427)
Q Consensus 409 ev~~~L~~~~~~~~ 422 (427)
|+++.|+++.+.+.
T Consensus 277 ~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 277 VLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988763
No 77
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.3e-36 Score=288.92 Aligned_cols=192 Identities=18% Similarity=0.250 Sum_probs=154.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..+..++.||+.||+||| +.||+||
T Consensus 72 l~hpnIv~l~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~givHr 139 (361)
T 2yab_A 72 VLHPNIITLHDVYEN-----RTDVVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLH---TKKIAHF 139 (361)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCCSCBHHHHHTTC----SCCBHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCcCCCcEEEEEEe-----CCEEEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 469999999998543 56789999999999999999765 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCC----ceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGEL----TAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~----~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++ .+||+|||+++..... ..||+.|+|||++.+..++.++||||+||++|||++|..||.
T Consensus 140 Dlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~ 219 (361)
T 2yab_A 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219 (361)
T ss_dssp CCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred CCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 9999999998776 7999999999876443 378999999999999999999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+... .......... ..... .......+.++.+++.+||..||++|||++|
T Consensus 220 ~~~~-----~~~~~~i~~~--------~~~~~-----------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e 269 (361)
T 2yab_A 220 GDTK-----QETLANITAV--------SYDFD-----------------EEFFSQTSELAKDFIRKLLVKETRKRLTIQE 269 (361)
T ss_dssp CSSH-----HHHHHHHHTT--------CCCCC-----------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred CCCH-----HHHHHHHHhc--------CCCCC-----------------chhccCCCHHHHHHHHHHCCCChhHCcCHHH
Confidence 5311 1111111000 00000 0011223556889999999999999999999
Q ss_pred HHH
Q 042634 410 VAA 412 (427)
Q Consensus 410 v~~ 412 (427)
+++
T Consensus 270 ~l~ 272 (361)
T 2yab_A 270 ALR 272 (361)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
No 78
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.9e-38 Score=296.16 Aligned_cols=215 Identities=21% Similarity=0.268 Sum_probs=147.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC-----CC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC-----ET 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~-----~~ 253 (427)
++||||+++++.+.... ......++||||+++|+|.+++.. ..+++..++.++.|++.||+|||... +.
T Consensus 54 ~~h~~i~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~ 127 (303)
T 3gxj_A 54 LRHENILGFIAADNKDN-GTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127 (303)
T ss_dssp CCC-CBCCEEEEEEEEC-SSSEEEEEEEECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC
T ss_pred ccCcceeeeeeecccCC-CccceeEEEEeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence 67999999999865521 111257899999999999999854 34888899999999999999999321 47
Q ss_pred CeeeccccCCceeeCCCCceEecccccccccCCcC----------CCccccccccccCCC------CcCccccchhHHHH
Q 042634 254 PIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT----------NNFFNFQIAEYGMGS------EVSTSGDVYSFGIL 317 (427)
Q Consensus 254 ~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~----------~~~~~y~aPE~~~~~------~~~~~~DiwS~G~v 317 (427)
||+||||||+||+++.++.+||+|||+|+...... .||..|+|||++.+. .++.++|||||||+
T Consensus 128 ~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i 207 (303)
T 3gxj_A 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 207 (303)
T ss_dssp -CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCC
T ss_pred CEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHH
Confidence 99999999999999999999999999997643321 689999999998776 45578999999999
Q ss_pred HHHHHhC----------CCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHH
Q 042634 318 LLETFTG----------KRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLV 387 (427)
Q Consensus 318 l~ell~g----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (427)
+|||++| ..||.................. ..... ...........++.
T Consensus 208 l~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~~~--------------~~~~~~~~~~~~~~ 265 (303)
T 3gxj_A 208 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC--------EQKLR--------------PNIPNRWQSCEALR 265 (303)
T ss_dssp C-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHT--------TSCCC--------------CCCCGGGGSSHHHH
T ss_pred HHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHH--------HhhcC--------------CCccccccchhhHH
Confidence 9999999 4455432211111111111100 00000 00111112346778
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHH
Q 042634 388 SVLGIGVTCSSELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 388 ~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
.+.+++.+||+.||++|||++||++.|+++.++.
T Consensus 266 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 266 VMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred HHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 8999999999999999999999999999886543
No 79
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.8e-36 Score=283.19 Aligned_cols=191 Identities=21% Similarity=0.295 Sum_probs=154.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... .+++..+..++.|++.||+||| +.||+||
T Consensus 99 l~h~niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~ 165 (321)
T 2c30_A 99 YQHFNVVEMYKSYLV-----GEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLH---AQGVIHR 165 (321)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCcceEEEEEEE-----CCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 579999999998654 45789999999999999988643 4899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++..... ..||..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 166 Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~ 245 (321)
T 2c30_A 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245 (321)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999865432 278999999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.......+....+.. .. .....+.++.+++.+||+.||++|||++|+++
T Consensus 246 --~~~~~~~~~~~~~~~--------~~---------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 246 --PVQAMKRLRDSPPPK--------LK---------------------NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp --HHHHHHHHHHSSCCC--------CT---------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --HHHHHHHHhcCCCCC--------cC---------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111111111000 00 11123456889999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 295 h 295 (321)
T 2c30_A 295 H 295 (321)
T ss_dssp S
T ss_pred C
Confidence 4
No 80
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=7.6e-37 Score=292.54 Aligned_cols=187 Identities=22% Similarity=0.262 Sum_probs=150.7
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.||+.||+||| +.||+|||
T Consensus 82 ~hp~Iv~l~~~~~~-----~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrD 149 (353)
T 3txo_A 82 NHPFLTQLFCCFQT-----PDRLFFVMEFVNGGDLMFHIQKS----RRFDEARARFYAAEIISALMFLH---DKGIIYRD 149 (353)
T ss_dssp TCTTBCCEEEEEEC-----SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCC
T ss_pred CCCceeeEEEEEEe-----CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccC
Confidence 69999999998543 56789999999999999998654 45999999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||+|||++.++.+||+|||+|+.... ...||+.|+|||++.+..++.++||||+||++|||++|+.||.+...
T Consensus 150 lkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 229 (353)
T 3txo_A 150 LKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE 229 (353)
T ss_dssp CCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH
Confidence 999999999999999999999986432 22789999999999988999999999999999999999999975311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH------
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM------ 407 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~------ 407 (427)
.+......... . . .+...+.++.+++.+||+.||++||++
T Consensus 230 -----~~~~~~i~~~~--------~----------------~-----~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~ 275 (353)
T 3txo_A 230 -----DDLFEAILNDE--------V----------------V-----YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGE 275 (353)
T ss_dssp -----HHHHHHHHHCC--------C----------------C-----CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCT
T ss_pred -----HHHHHHHHcCC--------C----------------C-----CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCH
Confidence 11111111000 0 0 111134558899999999999999998
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
+|+++
T Consensus 276 ~~il~ 280 (353)
T 3txo_A 276 HAILR 280 (353)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 67664
No 81
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=308.02 Aligned_cols=198 Identities=23% Similarity=0.356 Sum_probs=161.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++.. ...++|||||++|+|.+++.... ..+++..+..++.||+.||+||| ++||+||
T Consensus 393 l~hpniv~l~~~~~~------~~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHr 460 (613)
T 2ozo_A 393 LDNPYIVRLIGVCQA------EALMLVMEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLE---EKNFVHR 460 (613)
T ss_dssp CCCTTBCCEEEEEES------SSEEEEEECCTTCBHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEecc------CCeEEEEEeCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcC
Confidence 579999999998643 35899999999999999987543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+|||++.++.+||+|||+|+...... .++..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 461 Dlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf 540 (613)
T 2ozo_A 461 NLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 540 (613)
T ss_dssp CCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred cCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 999999999999999999999998764321 34578999999998999999999999999999998 99999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.+... ..+...+..... ...+..++.++.++|.+||+.||++|||++
T Consensus 541 ~~~~~--~~~~~~i~~~~~-------------------------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ 587 (613)
T 2ozo_A 541 KKMKG--PEVMAFIEQGKR-------------------------------MECPPECPPELYALMSDCWIYKWEDRPDFL 587 (613)
T ss_dssp TTCCS--HHHHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHH
T ss_pred CCCCH--HHHHHHHHcCCC-------------------------------CCCCCcCCHHHHHHHHHHcCCChhHCcCHH
Confidence 76422 111111111100 002234567899999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 042634 409 EVAAQLLSFRNKL 421 (427)
Q Consensus 409 ev~~~L~~~~~~~ 421 (427)
||++.|+.+...+
T Consensus 588 ~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 588 TVEQRMRACYYSL 600 (613)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987665
No 82
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.4e-36 Score=284.94 Aligned_cols=206 Identities=22% Similarity=0.360 Sum_probs=154.6
Q ss_pred cccccchhhhccccccCCCC-CCccceeeeeecCCCcccccccchhh--hhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQG-NDSEALVYEFMVNGSLEEWLHPNREA--LKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~--~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++||||+++++++......+ ....++||||+++|+|.+++...... ...+++..++.++.|++.||+||| +.||
T Consensus 82 l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i 158 (323)
T 3qup_A 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNF 158 (323)
T ss_dssp CCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTC
T ss_pred CCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCc
Confidence 47999999999865422111 11238999999999999998643311 125899999999999999999999 8999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCC
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKR 326 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~ 326 (427)
+||||||+||+++.++.+||+|||+|+..... ..++..|+|||.+.+..++.++|||||||++|||++ |..
T Consensus 159 vH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~ 238 (323)
T 3qup_A 159 IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT 238 (323)
T ss_dssp CCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCC
Confidence 99999999999999999999999999865332 255678999999999999999999999999999999 999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||.+... ......+..... ...+..++.++.+++.+||+.||++|||
T Consensus 239 p~~~~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps 285 (323)
T 3qup_A 239 PYAGIEN--AEIYNYLIGGNR-------------------------------LKQPPECMEEVYDLMYQCWSADPKQRPS 285 (323)
T ss_dssp TTTTCCG--GGHHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred CccccCh--HHHHHHHhcCCC-------------------------------CCCCCccCHHHHHHHHHHccCChhhCcC
Confidence 9976421 111111111000 0011234567899999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 042634 407 MEEVAAQLLSFRNK 420 (427)
Q Consensus 407 ~~ev~~~L~~~~~~ 420 (427)
+.|+++.|+++.+.
T Consensus 286 ~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 286 FTCLRMELENILGH 299 (323)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998753
No 83
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.2e-36 Score=284.66 Aligned_cols=203 Identities=17% Similarity=0.219 Sum_probs=161.1
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||||+++++.+.. ....++||||+ +++|.+++.... ..+++..++.++.|++.||+||| +.||+|||
T Consensus 63 ~h~~i~~~~~~~~~-----~~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrD 130 (330)
T 2izr_A 63 SGDGIPQVYYFGPC-----GKYNAMVLELL-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVH---SKNLIYRD 130 (330)
T ss_dssp SCTTSCCEEEEEEE-----TTEEEEEEECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred CCCCCCEEEEEEec-----CCccEEEEEeC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccC
Confidence 79999999988544 56789999999 999999987542 46999999999999999999999 89999999
Q ss_pred ccCCceeeCCCCc-----eEecccccccccCC-------------cCCCccccccccccCCCCcCccccchhHHHHHHHH
Q 042634 260 LKPSNVLLDGELT-----AHVGDFGLAKFLPE-------------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 260 lkp~NIll~~~~~-----~kL~DFG~a~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~el 321 (427)
|||+|||++.++. +||+|||+|+.... ...||..|+|||++.+..++.++|||||||++|||
T Consensus 131 lkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 210 (330)
T 2izr_A 131 VKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYF 210 (330)
T ss_dssp CCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHH
Confidence 9999999998887 99999999986532 23688999999999999999999999999999999
Q ss_pred HhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 322 FTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 322 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
++|+.||.+.... ...+..............+ .....++ ++.+++.+||+.||
T Consensus 211 l~g~~Pf~~~~~~--~~~~~~~~i~~~~~~~~~~------------------------~~~~~~p-~~~~li~~~l~~~p 263 (330)
T 2izr_A 211 LRGSLPWQGLKAD--TLKERYQKIGDTKRATPIE------------------------VLCENFP-EMATYLRYVRRLDF 263 (330)
T ss_dssp HHSSCTTTTCCCS--SHHHHHHHHHHHHHHSCHH------------------------HHTTTCH-HHHHHHHHHHHCCT
T ss_pred hcCCCCccccccc--cHHHHHHHHHhhhccCCHH------------------------HHhccCh-HHHHHHHHHHhCCC
Confidence 9999999864222 2222111110000000000 0011134 78999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 042634 402 RERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 402 ~~Rpt~~ev~~~L~~~~~~~ 421 (427)
.+|||+++|.+.|+++.++.
T Consensus 264 ~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 264 FEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp TCCCCHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHc
Confidence 99999999999999987764
No 84
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.8e-36 Score=281.09 Aligned_cols=197 Identities=20% Similarity=0.337 Sum_probs=158.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ...++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 70 l~h~~i~~~~~~~~~------~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 137 (281)
T 3cc6_A 70 LDHPHIVKLIGIIEE------EPTWIIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLE---SINCVHR 137 (281)
T ss_dssp HCCTTBCCEEEEECS------SSCEEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCcceEEEEEcC------CCCEEEEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 469999999987532 35689999999999999986532 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 138 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~ 217 (281)
T 3cc6_A 138 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217 (281)
T ss_dssp CCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCccc
Confidence 99999999999999999999999876432 256778999999988899999999999999999998 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+...... ..+..++..+.+++.+||+.||++|||++|+
T Consensus 218 ~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~el 264 (281)
T 3cc6_A 218 LEN--KDVIGVLEKGDRL-------------------------------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 264 (281)
T ss_dssp SCG--GGHHHHHHHTCCC-------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCh--HHHHHHHhcCCCC-------------------------------CCCCCCCHHHHHHHHHHccCCchhCcCHHHH
Confidence 321 1121111111000 0112234568999999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 411 AAQLLSFRNK 420 (427)
Q Consensus 411 ~~~L~~~~~~ 420 (427)
++.|+++.+.
T Consensus 265 l~~L~~~~~~ 274 (281)
T 3cc6_A 265 VCSLSDVYQM 274 (281)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 85
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-36 Score=283.67 Aligned_cols=188 Identities=23% Similarity=0.314 Sum_probs=154.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.||+.||+||| ++||+||
T Consensus 63 l~hp~Iv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHr 130 (318)
T 1fot_A 63 VTHPFIIRMWGTFQD-----AQQIFMIMDYIEGGELFSLLRKS----QRFPNPVAKFYAAEVCLALEYLH---SKDIIYR 130 (318)
T ss_dssp CCBTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHHHT----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECC
T ss_pred CCCCCCceEeEEEEe-----CCEEEEEEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 579999999998543 56789999999999999998654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~ 335 (427)
||||+||+++.++.+||+|||+|+..... ..||+.|+|||++.+..++.++||||+||++|||++|+.||.+...
T Consensus 131 Dlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-- 208 (318)
T 1fot_A 131 DLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-- 208 (318)
T ss_dssp CCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--
T ss_pred CCChheEEEcCCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--
Confidence 99999999999999999999999876543 3789999999999999999999999999999999999999975311
Q ss_pred ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CHHHH
Q 042634 336 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NMEEV 410 (427)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~~ev 410 (427)
........... .. .+...+.++.+++.+||+.||++|| +++|+
T Consensus 209 ---~~~~~~i~~~~--------~~---------------------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i 256 (318)
T 1fot_A 209 ---MKTYEKILNAE--------LR---------------------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDV 256 (318)
T ss_dssp ---HHHHHHHHHCC--------CC---------------------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHH
T ss_pred ---HHHHHHHHhCC--------CC---------------------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHH
Confidence 11111111000 00 0112345688999999999999999 88888
Q ss_pred HH
Q 042634 411 AA 412 (427)
Q Consensus 411 ~~ 412 (427)
++
T Consensus 257 ~~ 258 (318)
T 1fot_A 257 KN 258 (318)
T ss_dssp HT
T ss_pred hc
Confidence 75
No 86
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.6e-36 Score=300.27 Aligned_cols=197 Identities=29% Similarity=0.456 Sum_probs=157.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ...++||||+++|+|.+++..... ..+++..+..++.|++.||+||| ++||+||
T Consensus 236 l~hp~iv~~~~~~~~------~~~~iv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHr 304 (452)
T 1fmk_A 236 LRHEKLVQLYAVVSE------EPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304 (452)
T ss_dssp CCCTTBCCEEEEECS------SSCEEEECCCTTCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEEcC------CceEEEehhhcCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCC
Confidence 579999999988532 457999999999999999975432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+|||++.++.+||+|||+++..... ..++..|+|||++....++.++|||||||++|||++ |+.||.+
T Consensus 305 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~ 384 (452)
T 1fmk_A 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384 (452)
T ss_dssp CCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred CCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999876432 245678999999998899999999999999999999 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... .....+..... ...+..++..+.++|.+||+.||++|||++++
T Consensus 385 ~~~~--~~~~~i~~~~~-------------------------------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l 431 (452)
T 1fmk_A 385 MVNR--EVLDQVERGYR-------------------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYL 431 (452)
T ss_dssp CCHH--HHHHHHHTTCC-------------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCHH--HHHHHHHcCCC-------------------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 4211 11111111000 00123456778999999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 411 AAQLLSFRN 419 (427)
Q Consensus 411 ~~~L~~~~~ 419 (427)
++.|+.+..
T Consensus 432 ~~~L~~~~~ 440 (452)
T 1fmk_A 432 QAFLEDYFT 440 (452)
T ss_dssp HHHHHTTTS
T ss_pred HHHHHHHhc
Confidence 999998753
No 87
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.1e-36 Score=285.36 Aligned_cols=203 Identities=23% Similarity=0.356 Sum_probs=161.4
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh------------hhccCHHHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA------------LKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
+||||+++++.+.. .+...++||||+++|+|.+++...... ...+++..++.++.|++.||+||
T Consensus 89 ~hp~iv~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l 164 (316)
T 2xir_A 89 HHLNVVNLLGACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 164 (316)
T ss_dssp CCTTBCCEEEEECC----TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeeeEEEEEec----CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHH
Confidence 69999999998643 234589999999999999998765321 12388999999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcC--------CCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT--------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~--------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| +.||+||||||+||+++.++.+||+|||.++...... .++..|+|||++.+..++.++|||||||++|
T Consensus 165 H---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ 241 (316)
T 2xir_A 165 A---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241 (316)
T ss_dssp H---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred H---hCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHH
Confidence 9 8999999999999999999999999999998654322 4567899999999999999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
||++ |..||....... .+...+....... .+..++.++.+++.+||+
T Consensus 242 ~l~t~g~~p~~~~~~~~-~~~~~~~~~~~~~-------------------------------~~~~~~~~l~~li~~~l~ 289 (316)
T 2xir_A 242 EIFSLGASPYPGVKIDE-EFCRRLKEGTRMR-------------------------------APDYTTPEMYQTMLDCWH 289 (316)
T ss_dssp HHHTTSCCSSTTCCCSH-HHHHHHHHTCCCC-------------------------------CCTTCCHHHHHHHHHHTC
T ss_pred HHHhCCCCCCcccchhH-HHHHHhccCccCC-------------------------------CCCCCCHHHHHHHHHHcC
Confidence 9998 999997642221 1111111111000 111234568999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
.||++|||++|+++.|+.+.+..
T Consensus 290 ~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 290 GEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CChhhCcCHHHHHHHHHHHHhhh
Confidence 99999999999999999997654
No 88
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.2e-36 Score=288.68 Aligned_cols=189 Identities=22% Similarity=0.304 Sum_probs=149.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 67 ~~hp~iv~l~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHr 134 (345)
T 3a8x_A 67 SNHPFLVGLHSCFQT-----ESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLH---ERGIIYR 134 (345)
T ss_dssp TTCTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCC
T ss_pred CCCCccCeEEEEEEe-----CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 479999999998543 56789999999999999988643 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 135 Dlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 214 (345)
T 3a8x_A 135 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 214 (345)
T ss_dssp CCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTT
T ss_pred CCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcc
Confidence 9999999999999999999999986322 2278999999999999999999999999999999999999997532
Q ss_pred CCCcc---HHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 333 TGNLT---LHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 333 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
..... ......... ..... ..+...+.++.+++.+||+.||++|||+
T Consensus 215 ~~~~~~~~~~~~~~~~i-------~~~~~---------------------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 215 SSDNPDQNTEDYLFQVI-------LEKQI---------------------RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp C-------CHHHHHHHH-------HHCCC---------------------CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred cccccccccHHHHHHHH-------HcCCC---------------------CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11110 000000000 00000 0112234568899999999999999996
No 89
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.3e-36 Score=286.67 Aligned_cols=142 Identities=28% Similarity=0.401 Sum_probs=126.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..||||+++++.+.. ....++||||+ +++|.+++..... ..+++..++.++.||+.||+||| +.||+||
T Consensus 93 ~~h~~iv~~~~~~~~-----~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHr 161 (360)
T 3llt_A 93 INNNNIVKYHGKFMY-----YDHMCLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLR---KMSLTHT 161 (360)
T ss_dssp TTGGGBCCEEEEEEE-----TTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCeecccceeeE-----CCeeEEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeC
Confidence 469999999998654 45789999999 9999999875432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCC-------------------------CCceEecccccccccCCc---CCCccccccccccCCCCcCcccc
Q 042634 259 DLKPSNVLLDG-------------------------ELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGSEVSTSGD 310 (427)
Q Consensus 259 Dlkp~NIll~~-------------------------~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~~~~~~~D 310 (427)
||||+|||++. ++.+||+|||+|+..... ..||..|+|||++.+..++.++|
T Consensus 162 Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 241 (360)
T 3llt_A 162 DLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSD 241 (360)
T ss_dssp CCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHH
T ss_pred CCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccc
Confidence 99999999975 789999999999875443 37899999999999999999999
Q ss_pred chhHHHHHHHHHhCCCCCCcc
Q 042634 311 VYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 311 iwS~G~vl~ell~g~~pf~~~ 331 (427)
||||||++|||++|+.||...
T Consensus 242 iwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 242 MWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp HHHHHHHHHHHHHSSCSCCCS
T ss_pred hHHHHHHHHHHHHCCCCCCCC
Confidence 999999999999999999753
No 90
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=6e-36 Score=281.36 Aligned_cols=221 Identities=21% Similarity=0.205 Sum_probs=157.4
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
.||||+++++.+...........++||||+. |+|.+++..... ..+++..++.++.|++.||+||| +.||+|||
T Consensus 72 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~D 145 (308)
T 3g33_A 72 EHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRD 145 (308)
T ss_dssp CCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred CCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCC
Confidence 5999999999876533222335789999995 799999876543 34899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
|||+||+++.++.+||+|||+|+...... .+|..|+|||++.+..++.++||||+||++|||++|+.||.+....
T Consensus 146 lkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 225 (308)
T 3g33_A 146 LKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 225 (308)
T ss_dssp CCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH
T ss_pred CCHHHEEEcCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999999999999999999998764332 6788999999999999999999999999999999999999753211
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
..+.............. ............ .............+.+.++.+++.+||+.||++|||++|++++
T Consensus 226 -~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 226 -DQLGKIFDLIGLPPEDD-WPRDVSLPRGAF-----PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp -HHHHHHHHHHCCCCTTT-SCSSCSSCGGGS-----CCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -HHHHHHHHHhCCCChhh-ccchhhcccccc-----CCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 11112111111110000 000000000000 0000000000112245678999999999999999999999863
No 91
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=7.9e-36 Score=293.67 Aligned_cols=192 Identities=18% Similarity=0.211 Sum_probs=154.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++|||||++|+|.+++... ..+++..+..++.||+.||+||| +.||+||
T Consensus 67 l~hpnIv~l~~~~~~-----~~~~~lv~E~~~gg~L~~~i~~~----~~~~e~~~~~i~~qil~aL~~lH---~~givHr 134 (444)
T 3soa_A 67 LKHPNIVRLHDSISE-----EGHHYLIFDLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHCH---QMGVVHR 134 (444)
T ss_dssp CCBTTBCCEEEEEEC-----SSEEEEEECCCBCCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCC
T ss_pred CCCcCCCeEEEEEEE-----CCEEEEEEEeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 579999999998543 56789999999999999988754 45899999999999999999999 8999999
Q ss_pred cccCCceeeC---CCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLD---GELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~---~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+|||++ .++.+||+|||+|+..... ..||+.|+|||++.+..++.++||||+||++|+|++|..||.
T Consensus 135 DlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~ 214 (444)
T 3soa_A 135 NLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW 214 (444)
T ss_dssp CCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence 9999999998 4678999999999876432 378999999999999999999999999999999999999996
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+.. ...+...+...... ... .....++.++.+++.+||+.||++|||++|
T Consensus 215 ~~~--~~~~~~~i~~~~~~----~~~------------------------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e 264 (444)
T 3soa_A 215 DED--QHRLYQQIKAGAYD----FPS------------------------PEWDTVTPEAKDLINKMLTINPSKRITAAE 264 (444)
T ss_dssp CSS--HHHHHHHHHHTCCC----CCT------------------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred Ccc--HHHHHHHHHhCCCC----CCc------------------------cccccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence 531 11111111111000 000 011223556889999999999999999999
Q ss_pred HHH
Q 042634 410 VAA 412 (427)
Q Consensus 410 v~~ 412 (427)
+++
T Consensus 265 ~L~ 267 (444)
T 3soa_A 265 ALK 267 (444)
T ss_dssp HHH
T ss_pred Hhc
Confidence 986
No 92
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-36 Score=287.19 Aligned_cols=188 Identities=24% Similarity=0.390 Sum_probs=152.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++||||+ +|+|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 66 l~hpnIv~l~~~~~~-----~~~~~lv~E~~-~g~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~ 132 (336)
T 3h4j_B 66 LRHPHIIKLYDVITT-----PTDIVMVIEYA-GGELFDYIVEK----KRMTEDEGRRFFQQIICAIEYCH---RHKIVHR 132 (336)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCC-CEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCC
T ss_pred CCCCCCCeEEEEEEe-----CCEEEEEEECC-CCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 569999999998544 56789999999 78998888654 45999999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++..... ..||+.|+|||++.+..+ ++++||||+||++|||++|+.||.+..
T Consensus 133 Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~ 212 (336)
T 3h4j_B 133 DLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212 (336)
T ss_dssp CCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSS
T ss_pred CCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCcc
Confidence 99999999999999999999999876443 278999999999988876 789999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
... +...+.... ...+...+.++.+++++||+.||.+|||++|+++
T Consensus 213 ~~~--------------~~~~i~~~~--------------------~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 213 IPN--------------LFKKVNSCV--------------------YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp STT--------------CBCCCCSSC--------------------CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred HHH--------------HHHHHHcCC--------------------CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 111 000000000 0011223456889999999999999999999976
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 259 h 259 (336)
T 3h4j_B 259 D 259 (336)
T ss_dssp C
T ss_pred C
Confidence 4
No 93
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.5e-36 Score=278.73 Aligned_cols=200 Identities=27% Similarity=0.366 Sum_probs=155.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. .....++||||+++++|.+++..... ..+++..+..++.|++.||+||| +.||+||
T Consensus 71 l~h~~iv~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 141 (278)
T 1byg_A 71 LRHSNLVQLLGVIVE----EKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHR 141 (278)
T ss_dssp CCCTTBCCEEEEECC----C--CCEEEECCCTTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEEEc----CCCceEEEEecCCCCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 469999999997533 23467999999999999999865432 34889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---CCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~~~~~ 334 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 142 dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~- 220 (278)
T 1byg_A 142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL- 220 (278)
T ss_dssp CCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-
T ss_pred CCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-
Confidence 99999999999999999999999865433 266788999999988899999999999999999998 9999975321
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQL 414 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L 414 (427)
......+..... ...+..++.++.+++.+||+.||++|||++|+++.|
T Consensus 221 -~~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 268 (278)
T 1byg_A 221 -KDVVPRVEKGYK-------------------------------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 268 (278)
T ss_dssp -GGHHHHHTTTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -HHHHHHHhcCCC-------------------------------CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHH
Confidence 111111100000 001223456789999999999999999999999999
Q ss_pred HHHHHH
Q 042634 415 LSFRNK 420 (427)
Q Consensus 415 ~~~~~~ 420 (427)
++++..
T Consensus 269 ~~i~~~ 274 (278)
T 1byg_A 269 EHIKTH 274 (278)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999764
No 94
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.2e-36 Score=290.11 Aligned_cols=187 Identities=22% Similarity=0.298 Sum_probs=151.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 75 ~~hp~iv~l~~~~~~-----~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHr 142 (345)
T 1xjd_A 75 WEHPFLTHMFCTFQT-----KENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLH---SKGIVYR 142 (345)
T ss_dssp TTCTTBCCEEEEEEC-----SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCC
T ss_pred CCCCCCCcEEEEEEe-----CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeC
Confidence 479999999988543 56789999999999999998653 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|+|||++.+..++.++||||+||++|||++|+.||.+..
T Consensus 143 Dlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (345)
T 1xjd_A 143 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222 (345)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999999986422 2278999999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH-HHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME-EVA 411 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~-ev~ 411 (427)
. ..+...+....+ . .+...+.++.+++.+||+.||++|||+. ||+
T Consensus 223 ~--~~~~~~i~~~~~---------------------------~-----~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 223 E--EELFHSIRMDNP---------------------------F-----YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp H--HHHHHHHHHCCC---------------------------C-----CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred H--HHHHHHHHhCCC---------------------------C-----CCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1 111111110000 0 1112345688999999999999999997 664
No 95
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.1e-36 Score=283.20 Aligned_cols=193 Identities=19% Similarity=0.245 Sum_probs=154.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 71 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~ 138 (326)
T 2y0a_A 71 IQHPNVITLHEVYEN-----KTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGVYYLH---SLQIAHF 138 (326)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCCSCBHHHHHTTS----SCCBHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCcEEEEEEe-----CCEEEEEEEcCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcC
Confidence 469999999998543 56789999999999999998754 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCC----ceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGEL----TAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~----~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++ .+||+|||+++..... ..||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 139 Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 218 (326)
T 2y0a_A 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218 (326)
T ss_dssp CCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred CCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCC
Confidence 9999999998877 8999999999876432 378999999999999999999999999999999999999996
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+... ......+...... . . ......++..+.+++.+||+.||++|||++|
T Consensus 219 ~~~~--~~~~~~~~~~~~~----~-~-----------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 268 (326)
T 2y0a_A 219 GDTK--QETLANVSAVNYE----F-E-----------------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQD 268 (326)
T ss_dssp CSSH--HHHHHHHHHTCCC----C-C-----------------------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCCH--HHHHHHHHhcCCC----c-C-----------------------ccccccCCHHHHHHHHHHccCChhhCCCHHH
Confidence 5311 0011101000000 0 0 0011223556889999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
++++
T Consensus 269 ~l~h 272 (326)
T 2y0a_A 269 SLQH 272 (326)
T ss_dssp HHHS
T ss_pred HhcC
Confidence 9873
No 96
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.7e-36 Score=276.66 Aligned_cols=198 Identities=26% Similarity=0.420 Sum_probs=159.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 60 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 128 (267)
T 3t9t_A 60 LSHPKLVQLYGVCLE-----QAPICLVTEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLE---EACVIHR 128 (267)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEECCCTTCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEEcc-----CCCeEEEEeCCCCCcHHHHHhhCc---ccCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 469999999998543 457899999999999999986543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC-------cCCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE-------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++.... ...++..|+|||++.+..++.++||||+|+++|||++ |+.||..
T Consensus 129 dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (267)
T 3t9t_A 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208 (267)
T ss_dssp SCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC
Confidence 9999999999999999999999986533 2256678999999988889999999999999999999 8999875
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+...... ..+..++.++.+++.+||+.||++|||++|+
T Consensus 209 ~~~--~~~~~~i~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 255 (267)
T 3t9t_A 209 RSN--SEVVEDISTGFRL-------------------------------YKPRLASTHVYQIMNHCWRERPEDRPAFSRL 255 (267)
T ss_dssp CCH--HHHHHHHHTTCCC-------------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCH--HHHHHHHhcCCcC-------------------------------CCCccCcHHHHHHHHHHccCChhhCcCHHHH
Confidence 311 1111111110000 0111234568899999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 411 AAQLLSFRNK 420 (427)
Q Consensus 411 ~~~L~~~~~~ 420 (427)
++.|+++.++
T Consensus 256 l~~L~~l~~~ 265 (267)
T 3t9t_A 256 LRQLAEIAES 265 (267)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999999763
No 97
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-36 Score=278.61 Aligned_cols=200 Identities=23% Similarity=0.353 Sum_probs=162.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ....++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 67 l~h~~i~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 134 (287)
T 1u59_A 67 LDNPYIVRLIGVCQ------AEALMLVMEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLE---EKNFVHR 134 (287)
T ss_dssp CCCTTBCCEEEEEE------SSSEEEEEECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCEeEEEEEec------CCCcEEEEEeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHH---HCCEeeC
Confidence 46999999999862 245899999999999999986543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+||+++.++.+||+|||+++...... .++..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 135 dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~ 214 (287)
T 1u59_A 135 DLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 214 (287)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred CCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999998764321 45788999999988889999999999999999998 99999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ......+...... ..+..++.++.+++.+||+.||++|||+.
T Consensus 215 ~~~~~--~~~~~~i~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 261 (287)
T 1u59_A 215 KKMKG--PEVMAFIEQGKRM-------------------------------ECPPECPPELYALMSDCWIYKWEDRPDFL 261 (287)
T ss_dssp TTCCT--HHHHHHHHTTCCC-------------------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred ccCCH--HHHHHHHhcCCcC-------------------------------CCCCCcCHHHHHHHHHHcCCChhhCcCHH
Confidence 75321 1111111110000 01223456789999999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 042634 409 EVAAQLLSFRNKLVK 423 (427)
Q Consensus 409 ev~~~L~~~~~~~~~ 423 (427)
|+++.|+++..+...
T Consensus 262 ~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 262 TVEQRMRACYYSLAS 276 (287)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999876543
No 98
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.2e-36 Score=287.92 Aligned_cols=191 Identities=23% Similarity=0.322 Sum_probs=152.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++.+.. ....++||||+.+|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 72 l~hp~Iv~l~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH---~~givHr 139 (384)
T 4fr4_A 72 LEHPFLVNLWYSFQD-----EEDMFMVVDLLLGGDLRYHLQQN----VHFKEETVKLFICELVMALDYLQ---NQRIIHR 139 (384)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCTTEEHHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCcEEEEEEe-----CCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 479999999988543 56789999999999999998764 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCC---CCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMG---SEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~---~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+|||++.++.+||+|||+|+..... ..||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 140 Dlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~ 219 (384)
T 4fr4_A 140 DMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219 (384)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999876433 278999999999874 4589999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC-HHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN-MEE 409 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt-~~e 409 (427)
.... ............. . ..+..++.++.+++.+||+.||++||+ +++
T Consensus 220 ~~~~--~~~~~~~~~~~~~----~-------------------------~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~ 268 (384)
T 4fr4_A 220 RSST--SSKEIVHTFETTV----V-------------------------TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSD 268 (384)
T ss_dssp CTTS--CHHHHHHHHHHCC----C-------------------------CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHH
T ss_pred CCCc--cHHHHHHHHhhcc----c-------------------------CCCCcCCHHHHHHHHHHhcCCHhHhcccHHH
Confidence 3221 1111111110000 0 011223456899999999999999998 666
Q ss_pred HHH
Q 042634 410 VAA 412 (427)
Q Consensus 410 v~~ 412 (427)
+.+
T Consensus 269 l~~ 271 (384)
T 4fr4_A 269 VQN 271 (384)
T ss_dssp HHT
T ss_pred HHc
Confidence 553
No 99
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-36 Score=284.62 Aligned_cols=198 Identities=22% Similarity=0.416 Sum_probs=156.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 103 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 171 (333)
T 1mqb_A 103 FSHHNIIRLEGVISK-----YKPMMIITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKYLA---NMNYVHR 171 (333)
T ss_dssp CCCTTBCCEEEEECS-----SSSEEEEEECCTTEEHHHHHHHTT---TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCCCcEEEEEec-----CCCcEEEEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCC
Confidence 479999999998543 567899999999999999986542 45899999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 172 Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf 251 (333)
T 1mqb_A 172 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251 (333)
T ss_dssp CCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred CCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999998764321 45678999999999999999999999999999999 99999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ......+...... ..+..++.++.+++.+||+.||++|||++
T Consensus 252 ~~~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 298 (333)
T 1mqb_A 252 WELSN--HEVMKAINDGFRL-------------------------------PTPMDCPSAIYQLMMQCWQQERARRPKFA 298 (333)
T ss_dssp TTCCH--HHHHHHHHTTCCC-------------------------------CCCTTCBHHHHHHHHHHTCSSTTTSCCHH
T ss_pred ccCCH--HHHHHHHHCCCcC-------------------------------CCcccCCHHHHHHHHHHcCCChhhCcCHH
Confidence 65311 1111111110000 01122456689999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 042634 409 EVAAQLLSFRNK 420 (427)
Q Consensus 409 ev~~~L~~~~~~ 420 (427)
|+++.|+++.+.
T Consensus 299 ~l~~~L~~~~~~ 310 (333)
T 1mqb_A 299 DIVSILDKLIRA 310 (333)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 100
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=7.8e-36 Score=286.84 Aligned_cols=193 Identities=19% Similarity=0.247 Sum_probs=153.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..+..++.||+.||+||| +.||+||
T Consensus 85 l~hpnIv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~ 152 (362)
T 2bdw_A 85 LQHPNIVRLHDSIQE-----ESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCH---SNGIVHR 152 (362)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHTTC----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCC
T ss_pred CCCCCCCeEEEEEEe-----CCEEEEEEecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 579999999998543 56789999999999999988765 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCC---CceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGE---LTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~---~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+|||++.+ +.+||+|||+++..... ..||+.|+|||++.+..++.++|||||||++|||++|..||.+
T Consensus 153 Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 232 (362)
T 2bdw_A 153 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232 (362)
T ss_dssp CCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 999999999765 45999999999876543 3789999999999999999999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.. ...+...+...... .. ......++.++.+++.+||+.||++|||++|+
T Consensus 233 ~~--~~~~~~~i~~~~~~----~~------------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 282 (362)
T 2bdw_A 233 ED--QHRLYAQIKAGAYD----YP------------------------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 282 (362)
T ss_dssp SS--HHHHHHHHHHTCCC----CC------------------------TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CC--HHHHHHHHHhCCCC----CC------------------------cccccCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 31 11111111110000 00 00112235668999999999999999999998
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 283 l~h 285 (362)
T 2bdw_A 283 LKV 285 (362)
T ss_dssp TTS
T ss_pred hcC
Confidence 864
No 101
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-36 Score=286.92 Aligned_cols=215 Identities=17% Similarity=0.153 Sum_probs=163.8
Q ss_pred cccccchhhhcccccc-----------CCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASV-----------DFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~-----------~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
++||||+++++..... ....+...++||||+ +++|.+++..... ..+++..++.++.|++.||+||
T Consensus 99 l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~L 175 (352)
T 2jii_A 99 AAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK--HVLSERSVLQVACRLLDALEFL 175 (352)
T ss_dssp HCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHH
T ss_pred hcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCc--CCCCHHHHHHHHHHHHHHHHHH
Confidence 5699999866543221 111245679999999 9999999976532 5699999999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCC--ceEecccccccccCCc-------------CCCccccccccccCCCCcCccccch
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGEL--TAHVGDFGLAKFLPEA-------------TNNFFNFQIAEYGMGSEVSTSGDVY 312 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~--~~kL~DFG~a~~~~~~-------------~~~~~~y~aPE~~~~~~~~~~~Diw 312 (427)
| ++||+||||||+||+++.++ .+||+|||+++..... ..||..|+|||++.+..++.++|||
T Consensus 176 H---~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 252 (352)
T 2jii_A 176 H---ENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQ 252 (352)
T ss_dssp H---HTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred H---hCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHH
Confidence 9 88999999999999999998 9999999999765321 2688899999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHH
Q 042634 313 SFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGI 392 (427)
Q Consensus 313 S~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (427)
||||++|||++|+.||.........+....... ........+... .....+.++.++
T Consensus 253 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------------------~~~~~~~~l~~l 309 (352)
T 2jii_A 253 SLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKF-VDKPGPFVGPCG----------------------HWIRPSETLQKY 309 (352)
T ss_dssp HHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHH-HHSCCCEECTTS----------------------CEECCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhc-cCChhhhhhhcc----------------------ccCCCcHHHHHH
Confidence 999999999999999986532322222221111 111111111000 001134668999
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 042634 393 GVTCSSELPRERMNMEEVAAQLLSFRNKLV 422 (427)
Q Consensus 393 ~~~cl~~dP~~Rpt~~ev~~~L~~~~~~~~ 422 (427)
+.+||+.||++|||++|+++.|+++.++..
T Consensus 310 i~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 310 LKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp HHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999987753
No 102
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.3e-35 Score=277.22 Aligned_cols=205 Identities=19% Similarity=0.243 Sum_probs=160.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|++++..+..+.. .+...++||||+ +++|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 61 l~~~~~i~~~~~~~~----~~~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~ 129 (296)
T 4hgt_A 61 MQGGVGIPTIRWCGA----EGDYNVMVMELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIH---SKNFIHR 129 (296)
T ss_dssp HTTSTTCCCEEEEEE----ETTEEEEEEECC-CCBHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred hcCCCCCCeeeeecC----CCCceEEEEEcc-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 456776666655422 245679999999 999999986432 45899999999999999999999 8999999
Q ss_pred cccCCceee---CCCCceEecccccccccCC-------------cCCCccccccccccCCCCcCccccchhHHHHHHHHH
Q 042634 259 DLKPSNVLL---DGELTAHVGDFGLAKFLPE-------------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 259 Dlkp~NIll---~~~~~~kL~DFG~a~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell 322 (427)
||||+||++ +.++.+||+|||+|+.... ...+|..|+|||++.+..++.++|||||||++|||+
T Consensus 130 Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 209 (296)
T 4hgt_A 130 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN 209 (296)
T ss_dssp CCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHh
Confidence 999999999 7889999999999986543 226889999999999999999999999999999999
Q ss_pred hCCCCCCcccCCCc--cHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCC
Q 042634 323 TGKRPTNEMFTGNL--TLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 323 ~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 400 (427)
+|+.||........ .+........+..... ....++.++.+++.+||+.|
T Consensus 210 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~l~~li~~~l~~~ 261 (296)
T 4hgt_A 210 LGSLPWQGLKAATKRQKYERISEKKMSTPIEV----------------------------LCKGYPSEFATYLNFCRSLR 261 (296)
T ss_dssp HSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH----------------------------HTTTSCHHHHHHHHHHHTSC
T ss_pred cCCCCCcccchhhhhhhhhhhhcccccchhhh----------------------------hhccCCHHHHHHHHHHHhcC
Confidence 99999986432211 1111111111110000 01123567899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH
Q 042634 401 PRERMNMEEVAAQLLSFRNKLV 422 (427)
Q Consensus 401 P~~Rpt~~ev~~~L~~~~~~~~ 422 (427)
|++|||++|+++.|+++.++..
T Consensus 262 p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 262 FDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999988753
No 103
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=7.8e-36 Score=283.93 Aligned_cols=201 Identities=22% Similarity=0.394 Sum_probs=160.9
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
+||||+++++.+.. ....++||||+++|+|.+++..... ....+++..++.++.|++.||+||
T Consensus 99 ~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 173 (334)
T 2pvf_A 99 KHKNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL 173 (334)
T ss_dssp CCTTBCCEEEEECS-----SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEeeEEEEEcc-----CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 79999999998644 5678999999999999999875431 113488999999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
| +.||+||||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|
T Consensus 174 H---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 250 (334)
T 2pvf_A 174 A---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW 250 (334)
T ss_dssp H---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred H---hCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHH
Confidence 9 899999999999999999999999999999865432 25667899999998888999999999999999
Q ss_pred HHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 320 ETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 320 ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
||++ |..||.+... ..+...+...... ..+..++.++.+++.+||+
T Consensus 251 ellt~g~~p~~~~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~ 297 (334)
T 2pvf_A 251 EIFTLGGSPYPGIPV--EELFKLLKEGHRM-------------------------------DKPANCTNELYMMMRDCWH 297 (334)
T ss_dssp HHHTTSCCSSTTCCH--HHHHHHHHHTCCC-------------------------------CCCTTCCHHHHHHHHHHTC
T ss_pred HHHhCCCCCcCcCCH--HHHHHHHhcCCCC-------------------------------CCCccCCHHHHHHHHHHcc
Confidence 9999 9999975311 1111111111000 0112345678999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
.||++|||++|+++.|+++....
T Consensus 298 ~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 298 AVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CChhhCcCHHHHHHHHHHHHhcc
Confidence 99999999999999999997653
No 104
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.3e-36 Score=279.48 Aligned_cols=199 Identities=24% Similarity=0.395 Sum_probs=161.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++..... ..+++..++.++.|++.||+||| +.||+||
T Consensus 66 l~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~ 135 (288)
T 3kfa_A 66 IKHPNLVQLLGVCTR-----EPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLE---KKNFIHR 135 (288)
T ss_dssp CCCTTBCCEEEEECS-----SSSEEEEEECCTTEEHHHHHHHCCT--TTSCHHHHHHHHHHHHHHHHHHH---HHTCCCS
T ss_pred CCCCCEeeEEEEEcc-----CCCEEEEEEcCCCCcHHHHHHhccc--CCccHhHHHHHHHHHHHHHHHHH---HCCccCC
Confidence 469999999998543 5678999999999999999865432 45899999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||++.+..++.++||||+||++|+|++ |..||..
T Consensus 136 dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~ 215 (288)
T 3kfa_A 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215 (288)
T ss_dssp CCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999998765433 45667999999998899999999999999999999 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+...... ..+..++.++.+++.+||+.||++|||++|+
T Consensus 216 ~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~ 262 (288)
T 3kfa_A 216 IDL--SQVYELLEKDYRM-------------------------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262 (288)
T ss_dssp CCG--GGHHHHHHTTCCC-------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCH--HHHHHHHhccCCC-------------------------------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHH
Confidence 321 1121111111000 0122345678999999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 411 AAQLLSFRNK 420 (427)
Q Consensus 411 ~~~L~~~~~~ 420 (427)
++.|+.+.++
T Consensus 263 ~~~l~~~~~~ 272 (288)
T 3kfa_A 263 HQAFETMFQE 272 (288)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998765
No 105
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=9.6e-36 Score=280.41 Aligned_cols=215 Identities=22% Similarity=0.280 Sum_probs=154.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||++ |+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 76 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~ 143 (311)
T 3niz_A 76 LHHPNIVSLIDVIHS-----ERCLTLVFEFME-KDLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCH---QHRILHR 143 (311)
T ss_dssp CCCTTBCCEEEEECC-----SSCEEEEEECCS-EEHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred cCCCCEeeeeeEEcc-----CCEEEEEEcCCC-CCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 469999999998543 567899999996 58888776543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+|+..... ..+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 144 Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 223 (311)
T 3niz_A 144 DLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGV 223 (311)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999875422 267899999999876 56899999999999999999999999865
Q ss_pred cCCCccHHHHHHHhcc---cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 332 FTGNLTLHNFVKEALP---ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.... .+......... ..+....+...... ... .......+ ....+.++.++.+++.+||+.||++|||++
T Consensus 224 ~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 296 (311)
T 3niz_A 224 TDDD-QLPKIFSILGTPNPREWPQVQELPLWKQ---RTF-QVFEKKPW--SSIIPGFCQEGIDLLSNMLCFDPNKRISAR 296 (311)
T ss_dssp STTT-HHHHHHHHHCCCCTTTSGGGTTSHHHHS---CCC-CCCCCCCH--HHHSTTCCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred ChHH-HHHHHHHHHCCCChHHhhhhhccchhhh---ccc-ccccCCcH--HHhCcccCHHHHHHHHHHcCCChhHCCCHH
Confidence 3322 22222221111 11111000000000 000 00000000 001122345789999999999999999999
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
|+++
T Consensus 297 ell~ 300 (311)
T 3niz_A 297 DAMN 300 (311)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9986
No 106
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.7e-36 Score=281.28 Aligned_cols=205 Identities=18% Similarity=0.242 Sum_probs=155.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.........+++..++.++.|++.||+||| +.||+||
T Consensus 89 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~ 160 (310)
T 2wqm_A 89 LNHPNVIKYYASFIE-----DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHR 160 (310)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCEeeEEEEEEc-----CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCC
Confidence 469999999998654 45789999999999999998754433356899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||++|..||.+..
T Consensus 161 dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 240 (310)
T 2wqm_A 161 DIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 240 (310)
T ss_dssp CCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred CCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 99999999999999999999999865432 267889999999999999999999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.....+...+.. .... ......++.++.+++.+||+.||++|||++||++
T Consensus 241 ~~~~~~~~~~~~---~~~~---------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 241 MNLYSLCKKIEQ---CDYP---------------------------PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp CCHHHHHHHHHT---TCSC---------------------------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhHHHHHHHhhc---ccCC---------------------------CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 211111111110 0000 0011224556899999999999999999999999
Q ss_pred HHHHHHHHH
Q 042634 413 QLLSFRNKL 421 (427)
Q Consensus 413 ~L~~~~~~~ 421 (427)
.|+++....
T Consensus 291 ~l~~l~~~~ 299 (310)
T 2wqm_A 291 VAKRMHACT 299 (310)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999998764
No 107
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1e-35 Score=275.67 Aligned_cols=199 Identities=24% Similarity=0.420 Sum_probs=160.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ....++||||+++++|.+++..... ..+++..+..++.|++.||+||| +.||+||
T Consensus 65 l~h~~i~~~~~~~~------~~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~ 133 (279)
T 1qpc_A 65 LQHQRLVRLYAVVT------QEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIE---ERNYIHR 133 (279)
T ss_dssp CCCTTBCCEEEEEC------SSSCEEEEECCTTCBHHHHTTSHHH--HTCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCcCcceEEEEEc------CCCcEEEEecCCCCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 46999999998753 2457899999999999999976532 46899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+||+++.++.+||+|||.++...... .++..|+|||++.+..++.++|||||||++|||++ |+.||.+
T Consensus 134 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred CCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999998764322 45678999999988889999999999999999999 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+..... ...+..++.++.+++.+||+.||++|||++|+
T Consensus 214 ~~~--~~~~~~~~~~~~-------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 260 (279)
T 1qpc_A 214 MTN--PEVIQNLERGYR-------------------------------MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260 (279)
T ss_dssp CCH--HHHHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCH--HHHHHHHhcccC-------------------------------CCCcccccHHHHHHHHHHhccChhhCCCHHHH
Confidence 311 111111111000 00112345678999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 042634 411 AAQLLSFRNKL 421 (427)
Q Consensus 411 ~~~L~~~~~~~ 421 (427)
++.|+++....
T Consensus 261 ~~~l~~~~~~~ 271 (279)
T 1qpc_A 261 RSVLEDFFTAT 271 (279)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999997654
No 108
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.2e-36 Score=287.17 Aligned_cols=188 Identities=19% Similarity=0.218 Sum_probs=153.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 98 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHr 165 (350)
T 1rdq_E 98 VNFPFLVKLEFSFKD-----NSNLYMVMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLH---SLDLIYR 165 (350)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCeEEEEEEc-----CCEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 479999999988543 56789999999999999998654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~ 335 (427)
||||+|||++.++.+||+|||+|+...... .||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 166 Dlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--- 242 (350)
T 1rdq_E 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--- 242 (350)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---
T ss_pred cCccceEEECCCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC---
Confidence 999999999999999999999998765433 78999999999999999999999999999999999999997531
Q ss_pred ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC-----HHHH
Q 042634 336 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN-----MEEV 410 (427)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt-----~~ev 410 (427)
..+.......... . .+...+.++.+++.+||+.||++||+ ++||
T Consensus 243 --~~~~~~~i~~~~~----~-------------------------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei 291 (350)
T 1rdq_E 243 --PIQIYEKIVSGKV----R-------------------------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291 (350)
T ss_dssp --HHHHHHHHHHCCC----C-------------------------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHH
T ss_pred --HHHHHHHHHcCCC----C-------------------------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHH
Confidence 1111111110000 0 11123456889999999999999998 8888
Q ss_pred HH
Q 042634 411 AA 412 (427)
Q Consensus 411 ~~ 412 (427)
++
T Consensus 292 ~~ 293 (350)
T 1rdq_E 292 KN 293 (350)
T ss_dssp HT
T ss_pred Hh
Confidence 65
No 109
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.2e-36 Score=284.63 Aligned_cols=210 Identities=27% Similarity=0.397 Sum_probs=163.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++... +....++||||+++|+|.+++... .+++..++.++.|++.||+||| +.||+||
T Consensus 90 l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~ 158 (318)
T 3lxp_A 90 LYHEHIIKYKGCCEDA---GAASLQLVMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLH---AQHYIHR 158 (318)
T ss_dssp CCCTTBCCEEEEEEET---TTTEEEEEECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCcchhhEEEEEecC---CCceEEEEEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHH---hCCccCC
Confidence 4699999999986542 235678999999999999999654 3899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 159 Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 238 (318)
T 3lxp_A 159 DLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238 (318)
T ss_dssp CCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred CCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccc
Confidence 99999999999999999999999876442 256778999999998899999999999999999999999986
Q ss_pred cccCCCccHHHHHHHhcc------cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 330 EMFTGNLTLHNFVKEALP------ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
..... .... .... ..+.+.++. ......+..++.++.+++.+||+.||++
T Consensus 239 ~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~li~~~l~~dP~~ 294 (318)
T 3lxp_A 239 SPPTK---FLEL--IGIAQGQMTVLRLTELLER-------------------GERLPRPDKCPAEVYHLMKNCWETEASF 294 (318)
T ss_dssp SHHHH---HHHH--HCSCCHHHHHHHHHHHHHT-------------------TCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred ccchh---hhhh--hcccccchhHHHHHHHHhc-------------------ccCCCCCccccHHHHHHHHHHcCCCccc
Confidence 42110 0000 0000 000000000 0001122345677999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 042634 404 RMNMEEVAAQLLSFRNKLVK 423 (427)
Q Consensus 404 Rpt~~ev~~~L~~~~~~~~~ 423 (427)
|||++|+++.|+.+.+++..
T Consensus 295 Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 295 RPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp SCCHHHHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHHHhhcc
Confidence 99999999999999988753
No 110
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=8.6e-37 Score=284.34 Aligned_cols=196 Identities=22% Similarity=0.334 Sum_probs=153.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++.... ..+++..++.++.|++.||+||| ++||+||
T Consensus 69 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~ 137 (289)
T 4fvq_A 69 LSHKHLVLNYGVCVC-----GDENILVQEFVKFGSLDTYLKKNK---NCINILWKLEVAKQLAAAMHFLE---ENTLIHG 137 (289)
T ss_dssp SCCTTBCCEEEEECC-----TTCCEEEEECCTTCBHHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCEeEEEEEEEe-----CCCCEEEEECCCCCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHh---hCCeECC
Confidence 469999999998644 556799999999999999997543 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCc--------eEecccccccccCCcC--CCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELT--------AHVGDFGLAKFLPEAT--NNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~--------~kL~DFG~a~~~~~~~--~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++. +||+|||.++...... .++..|+|||++.+ ..++.++|||||||++|||++|..|
T Consensus 138 Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~ 217 (289)
T 4fvq_A 138 NVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK 217 (289)
T ss_dssp CCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CcCcceEEEecCCcccccccceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCC
Confidence 99999999988876 9999999997664433 67888999999987 6789999999999999999996554
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
+...... ......... ... .+...+.++.+++.+||+.||++|||+
T Consensus 218 ~~~~~~~-~~~~~~~~~--~~~-------------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~ 263 (289)
T 4fvq_A 218 PLSALDS-QRKLQFYED--RHQ-------------------------------LPAPKAAELANLINNCMDYEPDHRPSF 263 (289)
T ss_dssp TTTTSCH-HHHHHHHHT--TCC-------------------------------CCCCSSCTTHHHHHHHSCSSGGGSCCH
T ss_pred Cccccch-HHHHHHhhc--cCC-------------------------------CCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence 4321111 001010000 000 000112347889999999999999999
Q ss_pred HHHHHHHHHHHH
Q 042634 408 EEVAAQLLSFRN 419 (427)
Q Consensus 408 ~ev~~~L~~~~~ 419 (427)
+|+++.|+++..
T Consensus 264 ~~ll~~l~~l~~ 275 (289)
T 4fvq_A 264 RAIIRDLNSLFT 275 (289)
T ss_dssp HHHHHHHHTCC-
T ss_pred HHHHHHHHHhcC
Confidence 999999998754
No 111
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.3e-36 Score=309.06 Aligned_cols=197 Identities=24% Similarity=0.369 Sum_probs=160.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++.. ...++|||||++|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 427 l~hpnIv~l~~~~~~------~~~~lv~E~~~~g~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHr 493 (635)
T 4fl3_A 427 LDNPYIVRMIGICEA------ESWMLVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHR 493 (635)
T ss_dssp CCCTTBCCEEEEEES------SSEEEEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEEec------CCEEEEEEccCCCCHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCC
Confidence 579999999998632 3578999999999999999654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+|||++.++.+||+|||+|+...... .++..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 494 DLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf 573 (635)
T 4fl3_A 494 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 573 (635)
T ss_dssp CCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred CCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999998764322 45678999999999999999999999999999998 99999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.+... ..+...+..... ...+..++.++.++|.+||+.||++|||++
T Consensus 574 ~~~~~--~~~~~~i~~~~~-------------------------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ 620 (635)
T 4fl3_A 574 RGMKG--SEVTAMLEKGER-------------------------------MGCPAGCPREMYDLMNLCWTYDVENRPGFA 620 (635)
T ss_dssp TTCCH--HHHHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CCCCH--HHHHHHHHcCCC-------------------------------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHH
Confidence 76421 111111111100 002233567799999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 042634 409 EVAAQLLSFRNKL 421 (427)
Q Consensus 409 ev~~~L~~~~~~~ 421 (427)
+|++.|+++..++
T Consensus 621 ~l~~~L~~~~~~l 633 (635)
T 4fl3_A 621 AVELRLRNYYYDV 633 (635)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987765
No 112
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=277.69 Aligned_cols=192 Identities=21% Similarity=0.284 Sum_probs=151.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+... .....++||||+++++|.+++.. ..+++..++.++.|++.||+||| +.||+||
T Consensus 93 l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 161 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDP---NEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLH---YQKIIHR 161 (298)
T ss_dssp CCCTTBCCEEEEEECS---SSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCeEEEEEEcC---CCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 4699999999986431 24568999999999999987654 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCC---cCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSE---VSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~---~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++..... ..||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 162 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 241 (298)
T 2zv2_A 162 DIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241 (298)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 99999999999999999999999876432 37899999999998765 4788999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
... ............. ... ....++.++.+++.+||+.||++|||++|
T Consensus 242 ~~~-----~~~~~~~~~~~~~-~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~R~s~~e 289 (298)
T 2zv2_A 242 DER-----IMCLHSKIKSQAL-EFP--------------------------DQPDIAEDLKDLITRMLDKNPESRIVVPE 289 (298)
T ss_dssp CSS-----HHHHHHHHHHCCC-CCC--------------------------SSSCCCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred Ccc-----HHHHHHHHhcccC-CCC--------------------------CccccCHHHHHHHHHHhhcChhhCCCHHH
Confidence 531 1111111000000 000 01123456899999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
++++
T Consensus 290 ~l~h 293 (298)
T 2zv2_A 290 IKLH 293 (298)
T ss_dssp HTTC
T ss_pred HhcC
Confidence 9753
No 113
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=285.41 Aligned_cols=193 Identities=20% Similarity=0.292 Sum_probs=147.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++.++..++.|++.||+||| +.||+||
T Consensus 105 l~h~niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~ 172 (349)
T 2w4o_A 105 LSHPNIIKLKEIFET-----PTEISLVLELVTGGELFDRIVEK----GYYSERDAADAVKQILEAVAYLH---ENGIVHR 172 (349)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHTTC----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCCcceeeeEec-----CCeEEEEEEeCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 469999999998643 56789999999999999998765 34899999999999999999999 8999999
Q ss_pred cccCCceeeCC---CCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDG---ELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~---~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++. ++.+||+|||+++..... ..||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus 173 Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 252 (349)
T 2w4o_A 173 DLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252 (349)
T ss_dssp CCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 99999999975 889999999999876433 2688999999999999999999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.......+........ ....+ .....+.++.+++.+||+.||++|||++|+
T Consensus 253 ~~~~~~~~~~i~~~~~-----~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 303 (349)
T 2w4o_A 253 ERGDQFMFRRILNCEY-----YFISP------------------------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQA 303 (349)
T ss_dssp TTCHHHHHHHHHTTCC-----CCCTT------------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CcccHHHHHHHHhCCC-----ccCCc------------------------hhhhCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 3221111111100000 00000 112235568899999999999999999999
Q ss_pred HH
Q 042634 411 AA 412 (427)
Q Consensus 411 ~~ 412 (427)
++
T Consensus 304 l~ 305 (349)
T 2w4o_A 304 LQ 305 (349)
T ss_dssp HH
T ss_pred hc
Confidence 86
No 114
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.6e-36 Score=285.10 Aligned_cols=196 Identities=21% Similarity=0.276 Sum_probs=138.1
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||||+++++++.. ....++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+|||
T Consensus 64 ~h~niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~D 131 (325)
T 3kn6_A 64 GHPNIVKLHEVFHD-----QLHTFLVMELLNGGELFERIKKK----KHFSETEASYIMRKLVSAVSHMH---DVGVVHRD 131 (325)
T ss_dssp TCTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred CCCCeeEEEEEEEc-----CCEEEEEEEccCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecC
Confidence 59999999998543 56789999999999999998754 45999999999999999999999 89999999
Q ss_pred ccCCceeeCCCC---ceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 260 LKPSNVLLDGEL---TAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 260 lkp~NIll~~~~---~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||+||+++.++ .+||+|||+++..... ..+|..|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 132 lkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 211 (325)
T 3kn6_A 132 LKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211 (325)
T ss_dssp CCGGGEEEEC----CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred CCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 999999997665 8999999999865432 2678899999999999999999999999999999999999976
Q ss_pred ccCCC--ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 331 MFTGN--LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 331 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ....+......... .. ........++.++.+++.+||+.||++|||++
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~~--------~~-----------------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ 266 (325)
T 3kn6_A 212 HDRSLTCTSAVEIMKKIKKGD--------FS-----------------FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMS 266 (325)
T ss_dssp ------CCCHHHHHHHHTTTC--------CC-----------------CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTT
T ss_pred CccccccccHHHHHHHHHcCC--------CC-----------------CCcccccCCCHHHHHHHHHHCCCChhHCCCHH
Confidence 42211 11111111111100 00 00001233567789999999999999999999
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
|+++
T Consensus 267 ell~ 270 (325)
T 3kn6_A 267 GLRY 270 (325)
T ss_dssp TSTT
T ss_pred HHhc
Confidence 9874
No 115
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2e-36 Score=283.66 Aligned_cols=209 Identities=29% Similarity=0.438 Sum_probs=158.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+... +....++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 80 l~h~~i~~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 150 (302)
T 4e5w_A 80 LYHENIVKYKGICTED---GGNGIKLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLG---SRQYVHR 150 (302)
T ss_dssp CCCTTBCCEEEEEEC------CCEEEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCeeeeeeEEecC---CCceEEEEEEeCCCCcHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHhh---cCCcccC
Confidence 4699999999986541 2356789999999999999985443 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||.++..... ..+|..|+|||++.+..++.++||||+||++|||++|..|+.
T Consensus 151 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 151 DLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred CCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 99999999999999999999999865432 257778999999999999999999999999999999999865
Q ss_pred cccCCCccHHHHHHHhcccc----hhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 330 EMFTGNLTLHNFVKEALPER----LAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
.. .........+.. ....... .....+...+..++.++.+++.+||+.||++||
T Consensus 231 ~~------~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 288 (302)
T 4e5w_A 231 SP------MALFLKMIGPTHGQMTVTRLVNT----------------LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRT 288 (302)
T ss_dssp SH------HHHHHHHHCSCCGGGHHHHHHHH----------------HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSC
T ss_pred ch------hhHHhhccCCcccccCHHHHHHH----------------HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCC
Confidence 32 111111100000 0000000 000001112234567799999999999999999
Q ss_pred CHHHHHHHHHHHH
Q 042634 406 NMEEVAAQLLSFR 418 (427)
Q Consensus 406 t~~ev~~~L~~~~ 418 (427)
|++|+++.|+++.
T Consensus 289 s~~~ll~~L~~ll 301 (302)
T 4e5w_A 289 SFQNLIEGFEALL 301 (302)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 9999999999875
No 116
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=287.80 Aligned_cols=230 Identities=18% Similarity=0.227 Sum_probs=166.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++... +....++||||+++|+|.+++...... ..+++..++.++.|++.||+||| +.||+||
T Consensus 64 l~hpnIv~~~~~~~~~---~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 136 (396)
T 4eut_A 64 LNHKNIVKLFAIEEET---TTRHKVLIMEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLR---ENGIVHR 136 (396)
T ss_dssp CCCTTBCCEEEEEECT---TTCCEEEEECCCTTEEHHHHTTSGGGT-TCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred cCCCCCCeEEEeeccC---CCCeeEEEEecCCCCCHHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEEC
Confidence 4699999999876432 234679999999999999999865422 33899999999999999999999 8999999
Q ss_pred cccCCceee----CCCCceEecccccccccCCc-----CCCccccccccccCC--------CCcCccccchhHHHHHHHH
Q 042634 259 DLKPSNVLL----DGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMG--------SEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 259 Dlkp~NIll----~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~--------~~~~~~~DiwS~G~vl~el 321 (427)
||||+||++ +.++.+||+|||+|+..... ..||..|+|||++.+ ..++.++|||||||++|||
T Consensus 137 Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el 216 (396)
T 4eut_A 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216 (396)
T ss_dssp CCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHH
Confidence 999999999 77888999999999876443 268899999999865 5678899999999999999
Q ss_pred HhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 322 FTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 322 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
++|+.||.......... +.+.....+.....+........ ... .+....+ .........+..+.+++++||+.||
T Consensus 217 ~tg~~Pf~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~--~~~-~~~~~~~-~~~~l~~~~~~~l~~ll~~~L~~dP 291 (396)
T 4eut_A 217 ATGSLPFRPFEGPRRNK-EVMYKIITGKPSGAISGVQKAEN--GPI-DWSGDMP-VSCSLSRGLQVLLTPVLANILEADQ 291 (396)
T ss_dssp HHSSCSEECTTCTTTCH-HHHHHHHHSCCTTCCEEEECSTT--CCE-EEESSCC-TTCSSCHHHHHHHHHHHHHHSCCCT
T ss_pred HHCCCCCCCCCcccchH-HHHHHHhcCCCcccchhheeccC--CCc-ccCccCC-cccccchHHHhhchHHHHHhhccCh
Confidence 99999997643322222 22221111111111100000000 000 0000000 1112346678889999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 042634 402 RERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 402 ~~Rpt~~ev~~~L~~~~~~ 420 (427)
++|||++|+++.++++.++
T Consensus 292 ~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 292 EKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp TTSCCHHHHHHHHHHHHTC
T ss_pred hhhccHHHHHHHHHHHhhc
Confidence 9999999999999887653
No 117
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-35 Score=286.46 Aligned_cols=194 Identities=18% Similarity=0.262 Sum_probs=154.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.||+||
T Consensus 105 l~hpnIv~~~~~~~~-----~~~~~lv~E~~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givHr 173 (387)
T 1kob_A 105 LHHPKLINLHDAFED-----KYEMVLILEFLSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMH---EHSIVHL 173 (387)
T ss_dssp CCSTTBCCEEEEEEC-----SSEEEEEEECCCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCcCCCeEEEEEEe-----CCEEEEEEEcCCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 579999999998543 567899999999999999987543 35899999999999999999999 8999999
Q ss_pred cccCCceeeCC--CCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDG--ELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~--~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+|||++. ++.+||+|||+|+...... .||..|+|||++.+..++.++|||||||++|||++|..||.+.
T Consensus 174 Dlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 253 (387)
T 1kob_A 174 DIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE 253 (387)
T ss_dssp CCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred ccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC
Confidence 99999999974 5789999999998765432 7899999999999999999999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. ............. .+ .......+.++.+++.+||+.||++|||++|++
T Consensus 254 ~~-----~~~~~~i~~~~~~--~~-----------------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell 303 (387)
T 1kob_A 254 DD-----LETLQNVKRCDWE--FD-----------------------EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL 303 (387)
T ss_dssp SH-----HHHHHHHHHCCCC--CC-----------------------SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CH-----HHHHHHHHhCCCC--CC-----------------------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 11 1111110000000 00 001122356689999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
+.
T Consensus 304 ~h 305 (387)
T 1kob_A 304 EH 305 (387)
T ss_dssp TS
T ss_pred hC
Confidence 74
No 118
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7.8e-36 Score=278.30 Aligned_cols=197 Identities=24% Similarity=0.365 Sum_probs=160.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ....++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 75 l~h~~i~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~ 141 (291)
T 1xbb_A 75 LDNPYIVRMIGICE------AESWMLVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHR 141 (291)
T ss_dssp CCCTTBCCEEEEEE------SSSEEEEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCEEEEEEEEC------CCCcEEEEEeCCCCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcC
Confidence 46999999999862 35678999999999999998754 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+||+++.++.+||+|||+++...... .++..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 142 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~ 221 (291)
T 1xbb_A 142 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221 (291)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred CCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999998764322 45678999999988889999999999999999999 99999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ......+...... ..+..++.++.+++.+||+.||++|||+.
T Consensus 222 ~~~~~--~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 268 (291)
T 1xbb_A 222 RGMKG--SEVTAMLEKGERM-------------------------------GCPAGCPREMYDLMNLCWTYDVENRPGFA 268 (291)
T ss_dssp TTCCH--HHHHHHHHTTCCC-------------------------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CCCCH--HHHHHHHHcCCCC-------------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 75321 1111111110000 01223456789999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 042634 409 EVAAQLLSFRNKL 421 (427)
Q Consensus 409 ev~~~L~~~~~~~ 421 (427)
|+++.|+++....
T Consensus 269 ~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 269 AVELRLRNYYYDV 281 (291)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999997664
No 119
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=286.12 Aligned_cols=193 Identities=21% Similarity=0.230 Sum_probs=154.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.||+||
T Consensus 143 l~hpnIv~~~~~~~~-----~~~~~lv~E~~~~~~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 211 (373)
T 2x4f_A 143 LDHANLIQLYDAFES-----KNDIVLVMEYVDGGELFDRIIDES---YNLTELDTILFMKQICEGIRHMH---QMYILHL 211 (373)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCTTCEEHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCeEEEEEEE-----CCEEEEEEeCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 579999999998644 567899999999999998886443 45899999999999999999999 8999999
Q ss_pred cccCCceee--CCCCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLL--DGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll--~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+|||+ +.++.+||+|||+++...... .||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 212 Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 291 (373)
T 2x4f_A 212 DLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD 291 (373)
T ss_dssp CCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999 667899999999998764432 6899999999999899999999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. ...+.......... .. ......+.++.+++.+||+.||++|||++|++
T Consensus 292 ~~-~~~~~~i~~~~~~~-----~~------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l 341 (373)
T 2x4f_A 292 ND-AETLNNILACRWDL-----ED------------------------EEFQDISEEAKEFISKLLIKEKSWRISASEAL 341 (373)
T ss_dssp SH-HHHHHHHHHTCCCS-----CS------------------------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CH-HHHHHHHHhccCCC-----Ch------------------------hhhccCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 21 11111111110000 00 01122356689999999999999999999998
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 342 ~ 342 (373)
T 2x4f_A 342 K 342 (373)
T ss_dssp H
T ss_pred c
Confidence 7
No 120
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.4e-36 Score=285.59 Aligned_cols=188 Identities=20% Similarity=0.235 Sum_probs=151.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||+|+++++.+. .....++||||+++|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 78 ~~hp~iv~l~~~~~-----~~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~givHr 145 (353)
T 2i0e_A 78 GKPPFLTQLHSCFQ-----TMDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYR 145 (353)
T ss_dssp TCCTTBCCEEEEEE-----CSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCC
T ss_pred CCCCEEeeEEEEEE-----cCCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEec
Confidence 37999999998853 356789999999999999998654 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 146 Dlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 225 (353)
T 2i0e_A 146 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225 (353)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999999986422 2278999999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC-----H
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN-----M 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt-----~ 407 (427)
. ............ . .+...+.++.+++.+||+.||++||+ +
T Consensus 226 --~---~~~~~~i~~~~~------------------------~-----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~ 271 (353)
T 2i0e_A 226 --E---DELFQSIMEHNV------------------------A-----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGE 271 (353)
T ss_dssp --H---HHHHHHHHHCCC------------------------C-----CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHH
T ss_pred --H---HHHHHHHHhCCC------------------------C-----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCH
Confidence 1 111111110000 0 11123456889999999999999996 4
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
+|+++
T Consensus 272 ~~i~~ 276 (353)
T 2i0e_A 272 RDIKE 276 (353)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 66654
No 121
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.1e-36 Score=284.32 Aligned_cols=201 Identities=26% Similarity=0.381 Sum_probs=160.4
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh------------hhhccCHHHHHHHHHHHHHHHHHH
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE------------ALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
+||||+++++.+.. ....++||||+++|+|.+++..... ....+++..++.++.|++.||+||
T Consensus 84 ~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 158 (327)
T 1fvr_A 84 HHPNIINLLGACEH-----RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL 158 (327)
T ss_dssp CCTTBCCEEEEEEE-----TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhhceeeee-----CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 79999999998644 5678999999999999999876431 113589999999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell 322 (427)
| +.||+||||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||+
T Consensus 159 H---~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell 235 (327)
T 1fvr_A 159 S---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235 (327)
T ss_dssp H---HTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred H---hCCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHH
Confidence 9 899999999999999999999999999999754322 25677899999998888999999999999999999
Q ss_pred h-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 323 T-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 323 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
+ |+.||.+.. ....... .... .. ...+..++.++.+++.+||+.||
T Consensus 236 t~g~~pf~~~~-----~~~~~~~-~~~~----~~-----------------------~~~~~~~~~~l~~li~~~l~~dp 282 (327)
T 1fvr_A 236 SLGGTPYCGMT-----CAELYEK-LPQG----YR-----------------------LEKPLNCDDEVYDLMRQCWREKP 282 (327)
T ss_dssp TTSCCTTTTCC-----HHHHHHH-GGGT----CC-----------------------CCCCTTBCHHHHHHHHHHTCSSG
T ss_pred cCCCCCCCCCc-----HHHHHHH-hhcC----CC-----------------------CCCCCCCCHHHHHHHHHHccCCh
Confidence 8 999997531 1111111 1000 00 00112245668999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 042634 402 RERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 402 ~~Rpt~~ev~~~L~~~~~~~ 421 (427)
++|||++|+++.|+++.++.
T Consensus 283 ~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 283 YERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp GGSCCHHHHHHHHHHHHHSS
T ss_pred hhCcCHHHHHHHHHHHHHhh
Confidence 99999999999999987653
No 122
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.4e-35 Score=275.38 Aligned_cols=204 Identities=19% Similarity=0.254 Sum_probs=158.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+.|++++..+..+.. .+...++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++||+||
T Consensus 61 l~~~~~i~~~~~~~~----~~~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 129 (296)
T 3uzp_A 61 MQGGVGIPTIRWCGA----EGDYNVMVMELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIH---SKNFIHR 129 (296)
T ss_dssp HTTSTTCCCEEEEEE----ETTEEEEEEECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred hhcCCCCCccccccC----CCCceEEEEEec-CCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeC
Confidence 456666665554422 245679999999 999999986432 45999999999999999999999 8999999
Q ss_pred cccCCceee---CCCCceEecccccccccCCc-------------CCCccccccccccCCCCcCccccchhHHHHHHHHH
Q 042634 259 DLKPSNVLL---DGELTAHVGDFGLAKFLPEA-------------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 259 Dlkp~NIll---~~~~~~kL~DFG~a~~~~~~-------------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell 322 (427)
||||+||++ +.++.+||+|||.++..... ..|+..|+|||++.+..++.++|||||||++|||+
T Consensus 130 dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 209 (296)
T 3uzp_A 130 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN 209 (296)
T ss_dssp CCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHH
Confidence 999999999 47889999999999865432 26888999999999999999999999999999999
Q ss_pred hCCCCCCcccCCC--ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCC
Q 042634 323 TGKRPTNEMFTGN--LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 323 ~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 400 (427)
+|+.||....... ..+.............. ....++.++.+++.+||+.|
T Consensus 210 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~l~~li~~~l~~d 261 (296)
T 3uzp_A 210 LGSLPWQGLKAATKRQKYERISEKKMSTPIEV----------------------------LCKGYPSEFATYLNFCRSLR 261 (296)
T ss_dssp HSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH----------------------------HTTTSCHHHHHHHHHHHTSC
T ss_pred hCCCCCCCcCchhhhhhhhhhcccccCCchHH----------------------------HHhhCCHHHHHHHHHHHhcC
Confidence 9999998643221 11211111111110000 11223567899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHH
Q 042634 401 PRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 401 P~~Rpt~~ev~~~L~~~~~~~ 421 (427)
|++|||++|+++.|+++..+.
T Consensus 262 p~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 262 FDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp TTCCCCHHHHHHHHHHHHHHT
T ss_pred cCcCCCHHHHHHHHHHHHHhc
Confidence 999999999999999998764
No 123
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.4e-36 Score=286.19 Aligned_cols=196 Identities=21% Similarity=0.258 Sum_probs=152.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+. +....++||||+++|+|.+++... ..+++..+..++.||+.||+||| +.||+||
T Consensus 73 ~~hp~iv~~~~~~~-----~~~~~~lv~E~~~gg~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH---~~givHr 140 (342)
T 2qr7_A 73 GQHPNIITLKDVYD-----DGKYVYVVTELMKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLH---AQGVVHR 140 (342)
T ss_dssp TTSTTBCCEEEEEE-----CSSEEEEEECCCCSCBHHHHHHTC----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred cCCCCcCeEEEEEE-----cCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEec
Confidence 47999999999854 366789999999999999988755 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCC----CceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCC
Q 042634 259 DLKPSNVLLDGE----LTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~----~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
||||+|||+..+ +.+||+|||+++..... ..+|+.|+|||++.+..++.++||||+||++|||++|..||
T Consensus 141 Dlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf 220 (342)
T 2qr7_A 141 DLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220 (342)
T ss_dssp CCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred cCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCC
Confidence 999999998432 35999999999865432 26789999999998888999999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ....+........... ... ..+...+.++.+++.+||+.||++|||++
T Consensus 221 ~~~~~--~~~~~~~~~i~~~~~~-~~~------------------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~ 273 (342)
T 2qr7_A 221 ANGPD--DTPEEILARIGSGKFS-LSG------------------------GYWNSVSDTAKDLVSKMLHVDPHQRLTAA 273 (342)
T ss_dssp CSSTT--SCHHHHHHHHHHCCCC-CCS------------------------TTTTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CCCCc--CCHHHHHHHHccCCcc-cCc------------------------cccccCCHHHHHHHHHHCCCChhHCcCHH
Confidence 75321 1122221111111000 000 01122355688999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|++++
T Consensus 274 ~il~h 278 (342)
T 2qr7_A 274 LVLRH 278 (342)
T ss_dssp HHTTS
T ss_pred HHhcC
Confidence 99864
No 124
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1e-35 Score=289.06 Aligned_cols=220 Identities=17% Similarity=0.214 Sum_probs=153.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++.. ....++|||||++|+|.+++..... ..+++..++.++.||+.||+||| +.||+||
T Consensus 83 l~h~niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHr 152 (389)
T 3gni_B 83 FNHPNIVPYRATFIA-----DNELWVVTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIH---HMGYVHR 152 (389)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCcEeEEEEE-----CCEEEEEEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 579999999998654 5678999999999999999865422 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC-------------cCCCccccccccccCC--CCcCccccchhHHHHHHHHHh
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE-------------ATNNFFNFQIAEYGMG--SEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~-------------~~~~~~~y~aPE~~~~--~~~~~~~DiwS~G~vl~ell~ 323 (427)
||||+|||++.++.+||+|||.+..... ...||..|+|||++.+ ..++.++|||||||++|||++
T Consensus 153 Dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~ 232 (389)
T 3gni_B 153 SVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN 232 (389)
T ss_dssp CCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHH
Confidence 9999999999999999999998864321 1267888999999987 678999999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCcccccc-------------cc--cc--chhhhccccccccccchHHHH
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVE-------------RE--EG--ETSKANAHKQFTRSFSVKECL 386 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~--~~--~~~~~~~~~~~~~~~~~~~~~ 386 (427)
|+.||.+...... +........+ ...+...... .. .. ................+...+
T Consensus 233 g~~pf~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 307 (389)
T 3gni_B 233 GHVPFKDMPATQM-LLEKLNGTVP----CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFS 307 (389)
T ss_dssp SSCTTTTCCSTTH-HHHC------------------------------------------------------------CC
T ss_pred CCCCCCCCCHHHH-HHHHhcCCCC----ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccC
Confidence 9999976432221 1111111111 0000000000 00 00 000000000001111234456
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 387 VSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 387 ~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
.++.+++.+||+.||++|||++|++++
T Consensus 308 ~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 308 PHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 779999999999999999999999864
No 125
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-35 Score=292.93 Aligned_cols=189 Identities=23% Similarity=0.401 Sum_probs=154.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++||||+++|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 73 l~HpnIv~l~~~~~~-----~~~~~lv~E~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~givHr 140 (476)
T 2y94_A 73 FRHPHIIKLYQVIST-----PSDIFMVMEYVSGGELFDYICKN----GRLDEKESRRLFQQILSGVDYCH---RHMVVHR 140 (476)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCSSEEHHHHTTSS----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECS
T ss_pred CCCCCCCcEEEEEEE-----CCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcc
Confidence 579999999998544 56789999999999999999765 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++..... ..||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+..
T Consensus 141 DLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 220 (476)
T 2y94_A 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220 (476)
T ss_dssp CCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence 99999999999999999999999876443 278999999999988776 789999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ........ +.... .+...+.++.+++.+||+.||++|||++|+++
T Consensus 221 ~-----~~~~~~i~--------~~~~~---------------------~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 221 V-----PTLFKKIC--------DGIFY---------------------TPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp S-----HHHHHHHH--------TTCCC---------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred H-----HHHHHHHh--------cCCcC---------------------CCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 1 11111110 00000 11123456889999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 267 h 267 (476)
T 2y94_A 267 H 267 (476)
T ss_dssp C
T ss_pred C
Confidence 4
No 126
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.2e-35 Score=275.34 Aligned_cols=219 Identities=19% Similarity=0.213 Sum_probs=152.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||++ |++.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 58 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~-~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~ 125 (292)
T 3o0g_A 58 LKHKNIVRLHDVLHS-----DKKLTLVFEFCD-QDLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125 (292)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCS-EEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCEeeEEeEEEe-----CCEEEEEEecCC-CCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 469999999998644 567899999996 46665554322 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCC-cCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~-~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+|+..... ..+|..|+|||++.+.. ++.++||||+||++|||++|..||...
T Consensus 126 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~ 205 (292)
T 3o0g_A 126 DLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC
T ss_pred CCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC
Confidence 99999999999999999999999865422 26788999999998765 799999999999999999988886433
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
......+........... ............ ......... ...........+.++.+++.+||+.||++|||++|++
T Consensus 206 ~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 281 (292)
T 3o0g_A 206 NDVDDQLKRIFRLLGTPT-EEQWPSMTKLPD-YKPYPMYPA--TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281 (292)
T ss_dssp SSHHHHHHHHHHHHCCCC-TTTCTTGGGSTT-CCCCCCCCT--TCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CCHHHHHHHHHHHhCCCC-hhhhhhhccccc-ccccccccC--CcchhhcccccChHHHHHHHHHhccChhhCCCHHHHh
Confidence 222222222222211110 000000000000 000000000 0000001123456788999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 282 ~h 283 (292)
T 3o0g_A 282 QH 283 (292)
T ss_dssp TS
T ss_pred cC
Confidence 63
No 127
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.7e-36 Score=288.36 Aligned_cols=187 Identities=24% Similarity=0.225 Sum_probs=150.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.||+.||+||| ++||+||
T Consensus 96 ~~hp~Iv~l~~~~~~-----~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~givHr 163 (373)
T 2r5t_A 96 VKHPFLVGLHFSFQT-----ADKLYFVLDYINGGELFYHLQRE----RCFLEPRARFYAAEIASALGYLH---SLNIVYR 163 (373)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCCCCEEEEEEe-----CCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 679999999988543 56889999999999999988653 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|+|||++.+..++.++|||||||++|||++|..||.+..
T Consensus 164 Dlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 243 (373)
T 2r5t_A 164 DLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243 (373)
T ss_dssp CCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB
T ss_pred CCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999999986322 2278999999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
..+......... .. .+...+.++.+++.+||+.||++||++.+.+
T Consensus 244 -----~~~~~~~i~~~~--------~~---------------------~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 244 -----TAEMYDNILNKP--------LQ---------------------LKPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp -----HHHHHHHHHHSC--------CC---------------------CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred -----HHHHHHHHHhcc--------cC---------------------CCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 111111111000 00 0112345688999999999999999986433
No 128
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=279.89 Aligned_cols=186 Identities=23% Similarity=0.203 Sum_probs=149.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. +...++||||+ +++|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 114 ~~h~~iv~l~~~~~~-----~~~~~lv~e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 181 (311)
T 3p1a_A 114 GQHPCCVRLEQAWEE-----GGILYLQTELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLH---SQGLVHL 181 (311)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred cCCCcEEEEEEEEEe-----CCEEEEEEecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEecC
Confidence 479999999998654 56789999999 789988876542 45999999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+|||++.++.+||+|||+++..... ..||+.|+|||++.+ .++.++|||||||++|||++|..||...
T Consensus 182 Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~-- 258 (311)
T 3p1a_A 182 DVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG-- 258 (311)
T ss_dssp CCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH--
T ss_pred CCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc--
Confidence 99999999999999999999999876443 268999999999876 7899999999999999999997776432
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
..+... ...... ...+..++.++.+++.+||+.||++|||++|+++
T Consensus 259 --~~~~~~------------~~~~~~-------------------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 259 --EGWQQL------------RQGYLP-------------------PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp --HHHHHH------------TTTCCC-------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cHHHHH------------hccCCC-------------------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 011110 000000 0011224567899999999999999999999986
No 129
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.4e-36 Score=285.56 Aligned_cols=211 Identities=24% Similarity=0.358 Sum_probs=160.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. .+....++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 81 l~h~~i~~~~~~~~~---~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~ 151 (327)
T 3lxl_A 81 LHSDFIVKYRGVSYG---PGRQSLRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLG---SRRCVHR 151 (327)
T ss_dssp CCCTTBCCEEEEEEC---SSSCEEEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred cCCCceeEEEEEEec---CCCceEEEEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCccCC
Confidence 479999999987543 22456789999999999999987543 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 152 Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 231 (327)
T 3lxl_A 152 DLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 231 (327)
T ss_dssp CCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred CCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence 99999999999999999999999865432 256778999999998889999999999999999999999986
Q ss_pred cccCCCccHHHHHHHhc----ccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 330 EMFTGNLTLHNFVKEAL----PERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
.... ....... ........+.. ........+..++.++.+++.+||+.||++||
T Consensus 232 ~~~~------~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp 289 (327)
T 3lxl_A 232 SPSA------EFLRMMGCERDVPALSRLLELL----------------EEGQRLPAPPACPAEVHELMKLCWAPSPQDRP 289 (327)
T ss_dssp SHHH------HHHHHCC----CCHHHHHHHHH----------------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred cccc------hhhhhcccccccccHHHHHHHh----------------hcccCCCCCCcccHHHHHHHHHHcCCChhhCc
Confidence 4211 0000000 00000000000 00000112234567799999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 042634 406 NMEEVAAQLLSFRNK 420 (427)
Q Consensus 406 t~~ev~~~L~~~~~~ 420 (427)
|++|+++.|+.+...
T Consensus 290 s~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 290 SFSALGPQLDMLWSG 304 (327)
T ss_dssp CHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999998654
No 130
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8.7e-36 Score=281.50 Aligned_cols=224 Identities=21% Similarity=0.268 Sum_probs=153.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh--hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE--ALKNLNLLQRLSIAVDVASALDYLHHYCETPIV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~iv 256 (427)
++||||+++++.+.. ....++||||++ |+|.+++..... ....+++..+..++.|++.||+||| +.||+
T Consensus 60 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~iv 130 (317)
T 2pmi_A 60 LKHENIVRLYDVIHT-----ENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKIL 130 (317)
T ss_dssp CCBTTBCCEEEEECC-----TTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred cCCCCcceEEEEEEE-----CCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCee
Confidence 469999999998543 567899999996 699888864321 1134889999999999999999999 89999
Q ss_pred eccccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||||+||+++.++.+||+|||+++.... ...+|..|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 131 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 210 (317)
T 2pmi_A 131 HRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP 210 (317)
T ss_dssp CCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred eCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999987542 2367899999999876 468999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcc--cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 330 EMFTGNLTLHNFVKEALP--ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
+.... ..+......... ......+........ ......................+.++.+++.+||+.||++|||+
T Consensus 211 ~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 288 (317)
T 2pmi_A 211 GTNDE-EQLKLIFDIMGTPNESLWPSVTKLPKYNP-NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA 288 (317)
T ss_dssp CSSHH-HHHHHHHHHHCSCCTTTCGGGGGCTTCCT-TCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred CCChH-HHHHHHHHHhCCCChhHhhhhhhhhhccc-ccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCH
Confidence 54211 111111111110 000000000000000 00000000000000000111234578999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|+++.
T Consensus 289 ~e~l~h 294 (317)
T 2pmi_A 289 KQALHH 294 (317)
T ss_dssp HHHTTS
T ss_pred HHHhCC
Confidence 999763
No 131
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=280.79 Aligned_cols=206 Identities=18% Similarity=0.238 Sum_probs=160.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+... .......++||||+++|+|.+++.........+++..++.++.|++.||+||| +.||+||
T Consensus 83 l~h~~iv~~~~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~ 158 (317)
T 2buj_A 83 FNHPNILRLVAYCLRE-RGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHR 158 (317)
T ss_dssp CCCTTBCCCCEEEEEE-ETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred cCCCCeeeEEEEEEec-cCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 4799999999986531 11234678999999999999998764333356999999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------------CCCccccccccccCCCC---cCccccchhHHHHHHH
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------------TNNFFNFQIAEYGMGSE---VSTSGDVYSFGILLLE 320 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------------~~~~~~y~aPE~~~~~~---~~~~~DiwS~G~vl~e 320 (427)
||||+||+++.++.+||+|||.++..... ..|+..|+|||++.+.. ++.++|||||||++||
T Consensus 159 dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e 238 (317)
T 2buj_A 159 DLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYA 238 (317)
T ss_dssp CCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHH
Confidence 99999999999999999999998765321 14688999999987654 6899999999999999
Q ss_pred HHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCC
Q 042634 321 TFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 321 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 400 (427)
|++|+.||.................... .....++.++.+++.+||+.|
T Consensus 239 l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~d 287 (317)
T 2buj_A 239 MMFGEGPYDMVFQKGDSVALAVQNQLSI-------------------------------PQSPRHSSALWQLLNSMMTVD 287 (317)
T ss_dssp HHHSSCTTHHHHHTTSCHHHHHHCC--C-------------------------------CCCTTSCHHHHHHHHHHTCSS
T ss_pred HHhCCCChhhhhcccchhhHHhhccCCC-------------------------------CccccCCHHHHHHHHHHhhcC
Confidence 9999999965322222221111110000 011223456899999999999
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q 042634 401 PRERMNMEEVAAQLLSFRN 419 (427)
Q Consensus 401 P~~Rpt~~ev~~~L~~~~~ 419 (427)
|++|||++|+++.|+.+..
T Consensus 288 p~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 288 PHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp GGGSCCHHHHHHHHHHTCC
T ss_pred hhhCCCHHHHHHHhhhcCC
Confidence 9999999999999998754
No 132
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9.6e-36 Score=294.41 Aligned_cols=188 Identities=21% Similarity=0.261 Sum_probs=153.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCC-CCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCE-TPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~-~~ivH 257 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.|++.||+||| + .||+|
T Consensus 205 l~h~~iv~l~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~giiH 272 (446)
T 4ejn_A 205 SRHPFLTALKYSFQT-----HDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALDYLH---SEKNVVY 272 (446)
T ss_dssp CSCTTSCCEEEEEEE-----TTEEEEEECCCSSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCC
T ss_pred CCCCeEeeEEEEEee-----CCEEEEEEeeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEE
Confidence 579999999998654 56789999999999999988654 45899999999999999999999 6 89999
Q ss_pred ccccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|||||+|||++.++.+||+|||+|+.... ...||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 273 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 352 (446)
T 4ejn_A 273 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352 (446)
T ss_dssp CCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 99999999999999999999999986432 237899999999999999999999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----C
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----N 406 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t 406 (427)
.. ............ . .+...+.++.+++.+||+.||++|| |
T Consensus 353 ~~-----~~~~~~i~~~~~------------------------~-----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t 398 (446)
T 4ejn_A 353 DH-----EKLFELILMEEI------------------------R-----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSED 398 (446)
T ss_dssp SH-----HHHHHHHHHCCC------------------------C-----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTT
T ss_pred CH-----HHHHHHHHhCCC------------------------C-----CCccCCHHHHHHHHHHcccCHHHhCCCCCCC
Confidence 11 111111100000 0 1112345688999999999999999 9
Q ss_pred HHHHHH
Q 042634 407 MEEVAA 412 (427)
Q Consensus 407 ~~ev~~ 412 (427)
++|+++
T Consensus 399 ~~ell~ 404 (446)
T 4ejn_A 399 AKEIMQ 404 (446)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999986
No 133
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.4e-35 Score=290.42 Aligned_cols=224 Identities=17% Similarity=0.179 Sum_probs=151.2
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++++..... ......++||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.||+|
T Consensus 118 l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH---~~~iiH 187 (464)
T 3ttj_A 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLH---SAGIIH 187 (464)
T ss_dssp CCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred CCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 579999999998754321 233457999999954 56665542 3889999999999999999999 889999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||||+|||++.++.+||+|||+|+..... ..||+.|+|||++.+..++.++||||+||++|||++|+.||.+..
T Consensus 188 rDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~ 267 (464)
T 3ttj_A 188 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267 (464)
T ss_dssp CCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999999876543 378999999999999999999999999999999999999997632
Q ss_pred CCCccHHHHHHHhccc--chhcccCcccccccc------ccchhhhcccccc-ccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 333 TGNLTLHNFVKEALPE--RLAEIVDPVLLVERE------EGETSKANAHKQF-TRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
. ...+...+.....+ .....+.+....... ............+ .........+.++.+++.+||+.||++
T Consensus 268 ~-~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~ 346 (464)
T 3ttj_A 268 Y-IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 346 (464)
T ss_dssp H-HHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTT
T ss_pred H-HHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhh
Confidence 1 11122221111110 000000000000000 0000000000000 011122334678999999999999999
Q ss_pred CCCHHHHHHH
Q 042634 404 RMNMEEVAAQ 413 (427)
Q Consensus 404 Rpt~~ev~~~ 413 (427)
|||++|++++
T Consensus 347 R~ta~e~L~H 356 (464)
T 3ttj_A 347 RISVDDALQH 356 (464)
T ss_dssp SCCHHHHHTS
T ss_pred CCCHHHHhcC
Confidence 9999999874
No 134
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.3e-35 Score=275.58 Aligned_cols=202 Identities=22% Similarity=0.360 Sum_probs=159.2
Q ss_pred cccccchhhhccccccCC-----------CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVDF-----------QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYL 247 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-----------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~L 247 (427)
++||||+++++.+....+ ......++||||+++|+|.+++..... ..+++..++.++.|++.||.||
T Consensus 61 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~l 138 (284)
T 2a19_B 61 LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYI 138 (284)
T ss_dssp CCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGG--SCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHH
Confidence 479999999987644222 113447899999999999999975432 4689999999999999999999
Q ss_pred hhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHH
Q 042634 248 HHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 248 H~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell 322 (427)
| +.||+||||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||+
T Consensus 139 H---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 215 (284)
T 2a19_B 139 H---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215 (284)
T ss_dssp H---HTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHH
T ss_pred H---hCCeeeccCCHHHEEEcCCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHH
Confidence 9 899999999999999999999999999999876443 26888999999999999999999999999999999
Q ss_pred hCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCC
Q 042634 323 TGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPR 402 (427)
Q Consensus 323 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~ 402 (427)
+|..||... .......... . .+...+.++.+++.+||+.||+
T Consensus 216 ~~~~~~~~~-------~~~~~~~~~~----~---------------------------~~~~~~~~~~~li~~~l~~dp~ 257 (284)
T 2a19_B 216 HVCDTAFET-------SKFFTDLRDG----I---------------------------ISDIFDKKEKTLLQKLLSKKPE 257 (284)
T ss_dssp SCCSSHHHH-------HHHHHHHHTT----C---------------------------CCTTSCHHHHHHHHHHTCSSGG
T ss_pred hcCCcchhH-------HHHHHHhhcc----c---------------------------ccccCCHHHHHHHHHHccCChh
Confidence 999886431 0111100000 0 0011234578999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHh
Q 042634 403 ERMNMEEVAAQLLSFRNKLVK 423 (427)
Q Consensus 403 ~Rpt~~ev~~~L~~~~~~~~~ 423 (427)
+|||+.|+++.|..+++....
T Consensus 258 ~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 258 DRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp GSCCHHHHHHHHHHHTC----
T ss_pred hCcCHHHHHHHHHHHhhCCCc
Confidence 999999999999999766544
No 135
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.1e-35 Score=283.85 Aligned_cols=195 Identities=21% Similarity=0.248 Sum_probs=146.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++||||+++|+|.+++... ..+++..++.++.|++.||+||| ++||+||
T Consensus 73 l~hpniv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~ 140 (361)
T 3uc3_A 73 LRHPNIVRFKEVILT-----PTHLAIIMEYASGGELYERICNA----GRFSEDEARFFFQQLLSGVSYCH---SMQICHR 140 (361)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSC
T ss_pred CCCCCCCcEEEEEee-----CCEEEEEEEeCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccC
Confidence 579999999998643 56789999999999999988643 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCc--eEecccccccccCC-----cCCCccccccccccCCCCcCcc-ccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELT--AHVGDFGLAKFLPE-----ATNNFFNFQIAEYGMGSEVSTS-GDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~--~kL~DFG~a~~~~~-----~~~~~~~y~aPE~~~~~~~~~~-~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++.++. +||+|||+|+.... ...||+.|+|||++.+..++.+ +||||+||++|||++|+.||.+
T Consensus 141 Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 220 (361)
T 3uc3_A 141 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220 (361)
T ss_dssp CCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-
T ss_pred CCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCC
Confidence 99999999987765 99999999985322 2378999999999988887655 8999999999999999999976
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... ..+............ ... .....+.++.+++.+||+.||++|||++|+
T Consensus 221 ~~~~-~~~~~~~~~~~~~~~--------~~~-------------------~~~~~s~~~~~li~~~L~~dP~~Rps~~el 272 (361)
T 3uc3_A 221 PEEP-RDYRKTIQRILSVKY--------SIP-------------------DDIRISPECCHLISRIFVADPATRISIPEI 272 (361)
T ss_dssp ---C-CCHHHHHHHHHTTCC--------CCC-------------------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred CccH-HHHHHHHHHHhcCCC--------CCC-------------------CcCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 4222 222222222111100 000 001124568899999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 273 l~h 275 (361)
T 3uc3_A 273 KTH 275 (361)
T ss_dssp HTS
T ss_pred HhC
Confidence 875
No 136
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=6e-36 Score=301.99 Aligned_cols=196 Identities=29% Similarity=0.459 Sum_probs=159.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ...++||||+++|+|.+++..... ..+++.+++.++.||+.||+||| ++||+||
T Consensus 319 l~hpniv~~~~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHr 387 (535)
T 2h8h_A 319 LRHEKLVQLYAVVSE------EPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 387 (535)
T ss_dssp CCCTTBCCEEEEECS------SSCEEEECCCTTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEEee------ccceEeeehhcCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCC
Confidence 579999999988533 457999999999999999975432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC-------cCCCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE-------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+|||++.++.+||+|||+++.... ...++..|+|||++....++.++|||||||++|||++ |+.||.+
T Consensus 388 Dlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~ 467 (535)
T 2h8h_A 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 467 (535)
T ss_dssp CCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTT
T ss_pred CCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999987643 2256678999999998899999999999999999999 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... .+...+..... ...+..++.++.++|.+||+.||++|||++||
T Consensus 468 ~~~~--~~~~~i~~~~~-------------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l 514 (535)
T 2h8h_A 468 MVNR--EVLDQVERGYR-------------------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYL 514 (535)
T ss_dssp CCHH--HHHHHHHTTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCHH--HHHHHHHcCCC-------------------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 4211 11111111000 00123456778999999999999999999999
Q ss_pred HHHHHHHH
Q 042634 411 AAQLLSFR 418 (427)
Q Consensus 411 ~~~L~~~~ 418 (427)
++.|+.+.
T Consensus 515 ~~~L~~~~ 522 (535)
T 2h8h_A 515 QAFLEDYF 522 (535)
T ss_dssp HHHHHTSS
T ss_pred HHHHHHHh
Confidence 99998874
No 137
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=280.17 Aligned_cols=183 Identities=20% Similarity=0.309 Sum_probs=152.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCC-CcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNG-SLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++++.. ....++||||+.+| +|.+++... ..+++..+..++.|++.||+||| +.||+|
T Consensus 86 l~h~~Iv~~~~~~~~-----~~~~~lv~e~~~~g~~l~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH 153 (335)
T 3dls_A 86 VEHANIIKVLDIFEN-----QGFFQLVMEKHGSGLDLFAFIDRH----PRLDEPLASYIFRQLVSAVGYLR---LKDIIH 153 (335)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCTTSCBHHHHHHTC----CCCCHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred CCCCCEeeEEEEEee-----CCEEEEEEEeCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEE
Confidence 469999999998543 56789999999777 999988765 35899999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCcc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|||||+||+++.++.+||+|||+++...... .||+.|+|||++.+..+ +.++|||||||++|||++|+.||...
T Consensus 154 ~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 233 (335)
T 3dls_A 154 RDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCEL 233 (335)
T ss_dssp SCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSG
T ss_pred eccCHHHEEEcCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhH
Confidence 9999999999999999999999998765433 68999999999988877 88999999999999999999999652
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. ....... .+..++.++.+++.+||+.||++|||++|++
T Consensus 234 ~~-------------------~~~~~~~---------------------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell 273 (335)
T 3dls_A 234 EE-------------------TVEAAIH---------------------PPYLVSKELMSLVSGLLQPVPERRTTLEKLV 273 (335)
T ss_dssp GG-------------------GTTTCCC---------------------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HH-------------------HHhhccC---------------------CCcccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 11 0000000 0111345689999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
+.
T Consensus 274 ~h 275 (335)
T 3dls_A 274 TD 275 (335)
T ss_dssp HC
T ss_pred cC
Confidence 75
No 138
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=9.5e-36 Score=289.93 Aligned_cols=192 Identities=18% Similarity=0.226 Sum_probs=152.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++.+.. ....++|||||++|+|.+++.. ..+++..++.++.||+.||+||| +.||+||
T Consensus 126 l~hp~Iv~l~~~~~~-----~~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH---~~givHr 192 (410)
T 3v8s_A 126 ANSPWVVQLFYAFQD-----DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIH---SMGFIHR 192 (410)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCCeEEEEEEE-----CCEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 579999999998543 5678999999999999998854 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCC----cCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSE----VSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~----~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||++.++.+||+|||+|+..... ..||+.|+|||++.+.. ++.++|||||||++|||++|+.|
T Consensus 193 DLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~P 272 (410)
T 3v8s_A 193 DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272 (410)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCT
T ss_pred cCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCC
Confidence 99999999999999999999999865432 37999999999998765 88999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC--CC
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE--RM 405 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--Rp 405 (427)
|.+.. ............. ...-+ .....+.++.+++.+||+.+|++ ||
T Consensus 273 f~~~~-----~~~~~~~i~~~~~-~~~~p------------------------~~~~~s~~~~~li~~lL~~~~~rlgR~ 322 (410)
T 3v8s_A 273 FYADS-----LVGTYSKIMNHKN-SLTFP------------------------DDNDISKEAKNLICAFLTDREVRLGRN 322 (410)
T ss_dssp TCCSS-----HHHHHHHHHTHHH-HCCCC------------------------TTCCCCHHHHHHHHHHSSCGGGCTTSS
T ss_pred CCCCC-----hhhHHHHHHhccc-cccCC------------------------CcccccHHHHHHHHHHccChhhhCCCC
Confidence 97531 1111111110000 00000 00113456889999999999998 99
Q ss_pred CHHHHHHH
Q 042634 406 NMEEVAAQ 413 (427)
Q Consensus 406 t~~ev~~~ 413 (427)
+++||+++
T Consensus 323 ~~~ei~~H 330 (410)
T 3v8s_A 323 GVEEIKRH 330 (410)
T ss_dssp CHHHHHTS
T ss_pred CHHHHhcC
Confidence 99999864
No 139
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=9.5e-36 Score=281.72 Aligned_cols=199 Identities=21% Similarity=0.352 Sum_probs=158.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh------hhccCHHHHHHHHHHHHHHHHHHhhcCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA------LKNLNLLQRLSIAVDVASALDYLHHYCE 252 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~~~~~i~~~L~~LH~~~~ 252 (427)
++||||+++++.+.. ....++||||+++|+|.+++...... ...+++..++.++.|++.||+||| +
T Consensus 85 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~ 156 (322)
T 1p4o_A 85 FNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---A 156 (322)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred cCCCCEeeeEEEEcc-----CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---H
Confidence 479999999998543 56789999999999999998754321 134688999999999999999999 8
Q ss_pred CCeeeccccCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCCCCcCccccchhHHHHHHHHHh-
Q 042634 253 TPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT- 323 (427)
Q Consensus 253 ~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~- 323 (427)
+||+||||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||++
T Consensus 157 ~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~ 236 (322)
T 1p4o_A 157 NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 236 (322)
T ss_dssp TTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999865332 145678999999998899999999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|..||..... .+........... ..+..++..+.+++.+||+.||++
T Consensus 237 g~~p~~~~~~-----~~~~~~~~~~~~~----------------------------~~~~~~~~~l~~li~~~l~~dp~~ 283 (322)
T 1p4o_A 237 AEQPYQGLSN-----EQVLRFVMEGGLL----------------------------DKPDNCPDMLFELMRMCWQYNPKM 283 (322)
T ss_dssp SCCTTTTSCH-----HHHHHHHHTTCCC----------------------------CCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred CCCccccCCH-----HHHHHHHHcCCcC----------------------------CCCCCCCHHHHHHHHHHcCCCccc
Confidence 8999875311 1111111000000 011234566899999999999999
Q ss_pred CCCHHHHHHHHHHHH
Q 042634 404 RMNMEEVAAQLLSFR 418 (427)
Q Consensus 404 Rpt~~ev~~~L~~~~ 418 (427)
|||++|+++.|+++.
T Consensus 284 Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 284 RPSFLEIISSIKEEM 298 (322)
T ss_dssp SCCHHHHHHHHGGGS
T ss_pred CcCHHHHHHHHHHhh
Confidence 999999999998874
No 140
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.7e-35 Score=286.33 Aligned_cols=193 Identities=25% Similarity=0.325 Sum_probs=148.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ....++||||+++|+|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 197 l~hpniv~l~~~~~------~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHr 263 (419)
T 3i6u_A 197 LNHPCIIKIKNFFD------AEDYYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLH---ENGIIHR 263 (419)
T ss_dssp CCCTTBCCCCEEEE------SSEEEEEEECCTTCBGGGGTSSS----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCEeeEEEEEe------cCceEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 57999999998753 23478999999999999998765 45899999999999999999999 8899999
Q ss_pred cccCCceeeCCC---CceEecccccccccCCcC-----CCccccccccccCC---CCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGE---LTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMG---SEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~---~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~---~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||++.+ ..+||+|||+|+...... .||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 264 Dlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~p 343 (419)
T 3i6u_A 264 DLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343 (419)
T ss_dssp CCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 999999999654 469999999998765432 68899999999864 5688999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|...... ..+...+.......... .....+.++.+++.+||+.||++|||+
T Consensus 344 f~~~~~~-~~~~~~i~~~~~~~~~~----------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~ 394 (419)
T 3i6u_A 344 FSEHRTQ-VSLKDQITSGKYNFIPE----------------------------VWAEVSEKALDLVKKLLVVDPKARFTT 394 (419)
T ss_dssp SCCCSSS-CCHHHHHHTTCCCCCHH----------------------------HHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred CCCCcch-HHHHHHHhcCCCCCCch----------------------------hhcccCHHHHHHHHHHccCChhHCcCH
Confidence 9754222 22222222111000000 112245678999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|++++
T Consensus 395 ~e~l~h 400 (419)
T 3i6u_A 395 EEALRH 400 (419)
T ss_dssp HHHHHS
T ss_pred HHHhCC
Confidence 999873
No 141
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.8e-35 Score=272.84 Aligned_cols=189 Identities=20% Similarity=0.274 Sum_probs=152.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 66 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~ 133 (279)
T 3fdn_A 66 LRHPNILRLYGYFHD-----ATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCH---SKRVIHR 133 (279)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---TTTCEEC
T ss_pred CCCCCCcchhheEec-----CCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecc
Confidence 469999999998543 56789999999999999988654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
||||+||+++.++.+||+|||++...... ..++..|+|||.+.+..++.++||||+|+++|||++|+.||....
T Consensus 134 dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-- 211 (279)
T 3fdn_A 134 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-- 211 (279)
T ss_dssp CCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--
T ss_pred cCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc--
Confidence 99999999999999999999998765433 378899999999999999999999999999999999999997531
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
........... .. ..+...+..+.+++.+||+.||++|||++|++++
T Consensus 212 ---~~~~~~~~~~~------~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 212 ---YQETYKRISRV------EF-----------------------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ---HHHHHHHHHHT------CC-----------------------CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ---HHHHHHHHHhC------CC-----------------------CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111110000 00 0111234568899999999999999999999975
No 142
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5e-35 Score=270.45 Aligned_cols=192 Identities=21% Similarity=0.319 Sum_probs=153.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 62 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 129 (276)
T 2yex_A 62 LNHENVVKFYGHRRE-----GNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129 (276)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred cCCCCceeeeeEEEc-----CCEEEEEEEecCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecc
Confidence 479999999998544 56789999999999999999754 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||.+..... ...++..|+|||++.+..+ +.++|||||||++|||++|+.||.
T Consensus 130 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 209 (276)
T 2yex_A 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209 (276)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCS
T ss_pred CCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999976432 2368889999999988775 789999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
........+..+..... ... .....+..+.+++.+||+.||++|||++|
T Consensus 210 ~~~~~~~~~~~~~~~~~------~~~-------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 258 (276)
T 2yex_A 210 QPSDSCQEYSDWKEKKT------YLN-------------------------PWKKIDSAPLALLHKILVENPSARITIPD 258 (276)
T ss_dssp CSCTTSHHHHHHHTTCT------TST-------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred CCchHHHHHHHhhhccc------ccC-------------------------chhhcCHHHHHHHHHHCCCCchhCCCHHH
Confidence 64332222211111000 000 11123456889999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
+++.
T Consensus 259 il~~ 262 (276)
T 2yex_A 259 IKKD 262 (276)
T ss_dssp HTTC
T ss_pred HhcC
Confidence 9763
No 143
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.6e-36 Score=282.32 Aligned_cols=210 Identities=25% Similarity=0.433 Sum_probs=161.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+... +....++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 99 l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 169 (326)
T 2w1i_A 99 LQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLG---TKRYIHR 169 (326)
T ss_dssp CCCTTBCCEEEEECC-------CCEEEECCCTTCBHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCeeeEEEEEEec---CCCceEEEEECCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCEecc
Confidence 4699999999875431 2346789999999999999987543 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||.+.+..++.++|||||||++|||++|..||.
T Consensus 170 dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 249 (326)
T 2w1i_A 170 DLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 249 (326)
T ss_dssp CCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred CCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999876432 245667999999988889999999999999999999999876
Q ss_pred cccCCCccHHHHHHHhccc--------chhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 330 EMFTGNLTLHNFVKEALPE--------RLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
... ..+....... .+.+.+.. ..+...+..++.++.+++.+||+.||
T Consensus 250 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~li~~cl~~dP 304 (326)
T 2w1i_A 250 SPP------AEFMRMIGNDKQGQMIVFHLIELLKN-------------------NGRLPRPDGCPDEIYMIMTECWNNNV 304 (326)
T ss_dssp SHH------HHHHHHHCTTCCTHHHHHHHHHHHHT-------------------TCCCCCCTTCCHHHHHHHHHHSCSSG
T ss_pred CCH------HHHHHhhccccchhhhHHHHHHHhhc-------------------CCCCCCCCcccHHHHHHHHHHcCCCh
Confidence 420 0110000000 00000000 00001223456779999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 042634 402 RERMNMEEVAAQLLSFRNKLV 422 (427)
Q Consensus 402 ~~Rpt~~ev~~~L~~~~~~~~ 422 (427)
++|||++|+++.|+++++++.
T Consensus 305 ~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 305 NQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp GGSCCHHHHHHHHHHHHHHHH
T ss_pred hhCcCHHHHHHHHHHHHHHhc
Confidence 999999999999999998864
No 144
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3e-36 Score=283.88 Aligned_cols=201 Identities=20% Similarity=0.341 Sum_probs=148.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.... ..+...++||||+++++|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 69 l~hp~iv~~~~~~~~~~-~~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 140 (311)
T 3ork_A 69 LNHPAIVAVYDTGEAET-PAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHR 140 (311)
T ss_dssp CCCTTBCCEEEEEEEEE-TTEEEEEEEEECCCEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCcceEEEeeeccC-CCCcccEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcC
Confidence 47999999998865421 1112348999999999999998644 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++.+||+|||+++..... ..||..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 141 dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~ 220 (311)
T 3ork_A 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220 (311)
T ss_dssp CCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999865432 257899999999999999999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+.... .......... ... .......++.++.+++.+||+.||++||++.+
T Consensus 221 ~~~~~-----~~~~~~~~~~---~~~----------------------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~ 270 (311)
T 3ork_A 221 GDSPV-----SVAYQHVRED---PIP----------------------PSARHEGLSADLDAVVLKALAKNPENRYQTAA 270 (311)
T ss_dssp CSSHH-----HHHHHHHHCC---CCC----------------------HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHH
T ss_pred CCChH-----HHHHHHhcCC---CCC----------------------cccccCCCCHHHHHHHHHHHhcCHhhChhhHH
Confidence 53211 1111100000 000 00001124566899999999999999996665
Q ss_pred -HHHHHHHH
Q 042634 410 -VAAQLLSF 417 (427)
Q Consensus 410 -v~~~L~~~ 417 (427)
+...+.++
T Consensus 271 ~l~~~l~~~ 279 (311)
T 3ork_A 271 EMRADLVRV 279 (311)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 44555544
No 145
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.7e-35 Score=274.29 Aligned_cols=218 Identities=19% Similarity=0.240 Sum_probs=151.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||++ ++|.+++.... ..+++..++.++.|++.||+||| ++||+||
T Consensus 57 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 124 (288)
T 1ob3_A 57 LKHSNIVKLYDVIHT-----KKRLVLVFEHLD-QDLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCH---DRRVLHR 124 (288)
T ss_dssp CCCTTBCCEEEEEEC-----SSCEEEEEECCS-EEHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred cCCCCEeeeeeEEcc-----CCeEEEEEEecC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 469999999998543 567899999996 58888886543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+++.... ...+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 125 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (288)
T 1ob3_A 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204 (288)
T ss_dssp CCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999986542 2267899999999876 45899999999999999999999999764
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
... ..+........................ ... .....+..........+.++.+++.+||+.||++|||++|++
T Consensus 205 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 279 (288)
T 1ob3_A 205 SEA-DQLMRIFRILGTPNSKNWPNVTELPKY--DPN--FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279 (288)
T ss_dssp SHH-HHHHHHHHHHCCCCTTTSTTGGGSTTC--CTT--CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CHH-HHHHHHHHHHCCCChhhchhhhccccc--ccc--cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 211 111111111111000000000000000 000 000000000001122456688999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 280 ~h 281 (288)
T 1ob3_A 280 EH 281 (288)
T ss_dssp TS
T ss_pred cC
Confidence 63
No 146
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-35 Score=292.03 Aligned_cols=138 Identities=22% Similarity=0.359 Sum_probs=119.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++|||||++++++....+......++||||+ +|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 109 l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHr 180 (458)
T 3rp9_A 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTP----VYLTELHIKTLLYNLLVGVKYVH---SAGILHR 180 (458)
T ss_dssp CCCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCC
T ss_pred CCCCCCCceEEEEecCCcccCceEEEEEecc-ccchhhhcccC----CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCC
Confidence 4799999999998665555556789999998 68999888654 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC---------------------------------cCCCcccccccccc-CCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE---------------------------------ATNNFFNFQIAEYG-MGSE 304 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~---------------------------------~~~~~~~y~aPE~~-~~~~ 304 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|+|||++ ....
T Consensus 181 DlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~ 260 (458)
T 3rp9_A 181 DLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQEN 260 (458)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCC
T ss_pred CCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCC
Confidence 9999999999999999999999987532 12568899999976 4567
Q ss_pred cCccccchhHHHHHHHHHhC
Q 042634 305 VSTSGDVYSFGILLLETFTG 324 (427)
Q Consensus 305 ~~~~~DiwS~G~vl~ell~g 324 (427)
++.++|||||||++|||++|
T Consensus 261 ~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 261 YTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CCTHHHHHHHHHHHHHHHTT
T ss_pred CCcHhHHHHHHHHHHHHHHh
Confidence 99999999999999999993
No 147
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.8e-35 Score=280.51 Aligned_cols=188 Identities=21% Similarity=0.244 Sum_probs=149.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..+..++.||+.||+||| +.||+||
T Consensus 78 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~ 145 (327)
T 3a62_A 78 VKHPFIVDLIYAFQT-----GGKLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLH---QKGIIYR 145 (327)
T ss_dssp CCCTTBCCEEEEEEC-----SSCEEEEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCccceeEEEEc-----CCEEEEEEeCCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcc
Confidence 469999999988543 56789999999999999988643 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++.... ...||..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 146 Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 225 (327)
T 3a62_A 146 DLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225 (327)
T ss_dssp CCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC
Confidence 9999999999999999999999976432 2368999999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NM 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~ 407 (427)
. ........... .. .+...+.++.+++.+||+.||++|| |+
T Consensus 226 ~-----~~~~~~i~~~~----~~-------------------------~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~ 271 (327)
T 3a62_A 226 R-----KKTIDKILKCK----LN-------------------------LPPYLTQEARDLLKKLLKRNAASRLGAGPGDA 271 (327)
T ss_dssp H-----HHHHHHHHHTC----CC-------------------------CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTH
T ss_pred H-----HHHHHHHHhCC----CC-------------------------CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCH
Confidence 1 11111110000 00 1112345688999999999999999 77
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
+|+++
T Consensus 272 ~e~l~ 276 (327)
T 3a62_A 272 GEVQA 276 (327)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 78765
No 148
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=8.2e-36 Score=277.78 Aligned_cols=194 Identities=21% Similarity=0.276 Sum_probs=144.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC-Ceee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET-PIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~-~ivH 257 (427)
.+||||+++++.+.. ....++||||++ |+|.+++.........+++..++.++.|++.||+||| ++ ||+|
T Consensus 63 ~~h~~iv~~~~~~~~-----~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H 133 (290)
T 3fme_A 63 VDCPFTVTFYGALFR-----EGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIH 133 (290)
T ss_dssp CCCTTBCCEEEEEEC-----SSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCC
T ss_pred CCCCeEEEEeeeeec-----cCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeec
Confidence 579999999998643 567899999995 6888877654333356999999999999999999999 76 9999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc-----CCCcccccccccc----CCCCcCccccchhHHHHHHHHHhCCCCC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYG----MGSEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~----~~~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
|||||+||+++.++.+||+|||.++..... ..++..|+|||++ .+..++.++||||+||++|||++|+.||
T Consensus 134 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 213 (290)
T 3fme_A 134 RDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 213 (290)
T ss_dssp CCCSGGGCEECTTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSS
T ss_pred CCCCHHHEEECCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 999999999999999999999999865433 2788999999996 5567899999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.........+........+. .....++.++.+++.+||+.||++|||++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 262 (290)
T 3fme_A 214 DSWGTPFQQLKQVVEEPSPQ-------------------------------LPADKFSAEFVDFTSQCLKKNSKERPTYP 262 (290)
T ss_dssp CCCSCHHHHHHHHHHSCCCC-------------------------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cccCchHHHHHHHhccCCCC-------------------------------cccccCCHHHHHHHHHHhhcChhhCcCHH
Confidence 75321111111111110000 01122355689999999999999999999
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
|+++
T Consensus 263 e~l~ 266 (290)
T 3fme_A 263 ELMQ 266 (290)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 9987
No 149
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.8e-35 Score=274.93 Aligned_cols=190 Identities=16% Similarity=0.258 Sum_probs=151.5
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||||+++++.+.. ....++||||+++++|.+++.........+++..++.++.|++.||+||| ++||+|||
T Consensus 69 ~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~D 140 (289)
T 1x8b_A 69 QHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMD 140 (289)
T ss_dssp SCTTBCCEEEEEEE-----TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSC
T ss_pred CCCCeeeeeeeeec-----CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecC
Confidence 79999999998644 56789999999999999999765443356899999999999999999999 89999999
Q ss_pred ccCCceeeCC-------------------CCceEecccccccccCCcC--CCccccccccccCCC-CcCccccchhHHHH
Q 042634 260 LKPSNVLLDG-------------------ELTAHVGDFGLAKFLPEAT--NNFFNFQIAEYGMGS-EVSTSGDVYSFGIL 317 (427)
Q Consensus 260 lkp~NIll~~-------------------~~~~kL~DFG~a~~~~~~~--~~~~~y~aPE~~~~~-~~~~~~DiwS~G~v 317 (427)
|||+||+++. ...+||+|||.++...... .++..|+|||++.+. .++.++|||||||+
T Consensus 141 ikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~i 220 (289)
T 1x8b_A 141 IKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALT 220 (289)
T ss_dssp CSGGGEEEC--------------------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHH
Confidence 9999999984 4479999999998765433 789999999999775 56789999999999
Q ss_pred HHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcC
Q 042634 318 LLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCS 397 (427)
Q Consensus 318 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 397 (427)
+|||++|.+++... ...........+ . .+..++.++.+++.+||
T Consensus 221 l~~l~~~~~~~~~~----~~~~~~~~~~~~----~----------------------------~~~~~~~~~~~li~~~l 264 (289)
T 1x8b_A 221 VVCAAGAEPLPRNG----DQWHEIRQGRLP----R----------------------------IPQVLSQEFTELLKVMI 264 (289)
T ss_dssp HHHHTTCCCCCSSS----HHHHHHHTTCCC----C----------------------------CSSCCCHHHHHHHHHHT
T ss_pred HHHHhcCCCCCcch----hHHHHHHcCCCC----C----------------------------CCcccCHHHHHHHHHHh
Confidence 99999999876432 111111000000 0 11123456899999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 042634 398 SELPRERMNMEEVAAQ 413 (427)
Q Consensus 398 ~~dP~~Rpt~~ev~~~ 413 (427)
+.||++|||++|++++
T Consensus 265 ~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 265 HPDPERRPSAMALVKH 280 (289)
T ss_dssp CSSGGGSCCHHHHHTC
T ss_pred CCCcccCCCHHHHhhC
Confidence 9999999999999863
No 150
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7.7e-35 Score=271.36 Aligned_cols=195 Identities=25% Similarity=0.362 Sum_probs=152.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC--ee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP--IV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~--iv 256 (427)
++||||+++++.+... ..+....++||||+++|+|.+++... ..+++..++.++.|++.||+||| +.| |+
T Consensus 82 l~h~~iv~~~~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~ 153 (290)
T 1t4h_A 82 LQHPNIVRFYDSWEST-VKGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLH---TRTPPII 153 (290)
T ss_dssp CCCTTBCCEEEEEEEE-SSSCEEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCC
T ss_pred CCCCCeeeeeeeeccc-cCCCceEEEEEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEE
Confidence 4699999999876442 22345679999999999999998653 45899999999999999999999 788 99
Q ss_pred eccccCCceeeC-CCCceEecccccccccCCcC----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 257 HCDLKPSNVLLD-GELTAHVGDFGLAKFLPEAT----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 257 HrDlkp~NIll~-~~~~~kL~DFG~a~~~~~~~----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||||+||+++ .++.+||+|||++....... .++..|+|||++. ..++.++||||+||++|+|++|+.||...
T Consensus 154 H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 232 (290)
T 1t4h_A 154 HRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC 232 (290)
T ss_dssp CSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCc
Confidence 999999999997 78999999999997654432 6889999999876 45899999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
... ........... .+. ..+...+.++.+++.+||+.||++|||++|++
T Consensus 233 ~~~----~~~~~~~~~~~-----~~~----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 281 (290)
T 1t4h_A 233 QNA----AQIYRRVTSGV-----KPA----------------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281 (290)
T ss_dssp SSH----HHHHHHHTTTC-----CCG----------------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CcH----HHHHHHHhccC-----Ccc----------------------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 211 11111111000 000 01111234689999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 282 ~h 283 (290)
T 1t4h_A 282 NH 283 (290)
T ss_dssp TS
T ss_pred hC
Confidence 63
No 151
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.2e-35 Score=287.57 Aligned_cols=195 Identities=17% Similarity=0.195 Sum_probs=153.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++|||||++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 131 ~~hp~Iv~l~~~~~~-----~~~~~lV~Ey~~gg~L~~~l~~~~---~~l~e~~~~~~~~qi~~aL~~LH---~~giiHr 199 (437)
T 4aw2_A 131 GDSKWITTLHYAFQD-----DNNLYLVMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIAIDSVH---QLHYVHR 199 (437)
T ss_dssp SCTTTBCCEEEEEEC-----SSEEEEEECCCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCEEEEEEEEee-----CCEEEEEEecCCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeEec
Confidence 579999999998544 567899999999999999997632 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccC-----CCCcCccccchhHHHHHHHHHhCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGM-----GSEVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~-----~~~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
||||+|||++.++.+||+|||+|+..... ..||+.|+|||++. ...++.++|||||||++|||++|+.
T Consensus 200 DLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~ 279 (437)
T 4aw2_A 200 DIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET 279 (437)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSC
T ss_pred ccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCC
Confidence 99999999999999999999999765332 37899999999987 5678999999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC--C
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE--R 404 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~--R 404 (427)
||.+... .+.......... ... +.. .....+.++.+++++|+..+|++ |
T Consensus 280 Pf~~~~~-----~~~~~~i~~~~~-~~~---------------------~p~--~~~~~s~~~~dLi~~lL~~~~~r~~r 330 (437)
T 4aw2_A 280 PFYAESL-----VETYGKIMNHKE-RFQ---------------------FPT--QVTDVSENAKDLIRRLICSREHRLGQ 330 (437)
T ss_dssp TTCCSSH-----HHHHHHHHTHHH-HCC---------------------CCS--SCCCSCHHHHHHHHTTSSCGGGCTTT
T ss_pred CCCCCCh-----hHHHHhhhhccc-ccc---------------------CCc--ccccCCHHHHHHHHHHhcccccccCC
Confidence 9975311 111111110000 000 000 00113456889999999999988 9
Q ss_pred CCHHHHHHH
Q 042634 405 MNMEEVAAQ 413 (427)
Q Consensus 405 pt~~ev~~~ 413 (427)
|+++|++++
T Consensus 331 ~~~~eil~H 339 (437)
T 4aw2_A 331 NGIEDFKKH 339 (437)
T ss_dssp TTTHHHHTS
T ss_pred CCHHHHhCC
Confidence 999998763
No 152
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.5e-35 Score=286.70 Aligned_cols=200 Identities=17% Similarity=0.142 Sum_probs=149.1
Q ss_pred cccccchhhhccccccC--CC------------CCC-----ccceeeeeecCCCcccccccchhh---hhccCHHHHHHH
Q 042634 179 IRHRNLVKIITSCASVD--FQ------------GND-----SEALVYEFMVNGSLEEWLHPNREA---LKNLNLLQRLSI 236 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~--~~------------~~~-----~~~lv~e~~~~g~L~~~l~~~~~~---~~~l~~~~~~~~ 236 (427)
++|||||++++.+.... +. ++. ..++||||+ +|+|.+++...... ...+++..++.+
T Consensus 133 l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i 211 (377)
T 3byv_A 133 IKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQL 211 (377)
T ss_dssp CCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred cCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHH
Confidence 47999999996543210 11 111 368999999 78999998754210 123455888899
Q ss_pred HHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCc---CCCccccccccccCCC----------
Q 042634 237 AVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGS---------- 303 (427)
Q Consensus 237 ~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~---------- 303 (427)
+.||+.||+||| +.||+||||||+|||++.++.+||+|||+|+..... ..| ..|+|||++.+.
T Consensus 212 ~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~ 287 (377)
T 3byv_A 212 TLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRR 287 (377)
T ss_dssp HHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCE
T ss_pred HHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhccccccccccccc
Confidence 999999999999 899999999999999999999999999999875432 266 899999999887
Q ss_pred -CcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccch
Q 042634 304 -EVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSV 382 (427)
Q Consensus 304 -~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (427)
.++.++|||||||++|||++|+.||........ ...+... .
T Consensus 288 ~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~-------------~~~~~~~-------------------------~ 329 (377)
T 3byv_A 288 TLMTFSFDAWALGLVIYWIWCADLPITKDAALGG-------------SEWIFRS-------------------------C 329 (377)
T ss_dssp EECCHHHHHHHHHHHHHHHHHSSCCC------CC-------------SGGGGSS-------------------------C
T ss_pred ccCChhhhHHHHHHHHHHHHHCCCCCcccccccc-------------hhhhhhh-------------------------c
Confidence 899999999999999999999999965321110 0000000 0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH--HHHHHHHHH
Q 042634 383 KECLVSVLGIGVTCSSELPRERMNMEEVAA--QLLSFRNKL 421 (427)
Q Consensus 383 ~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~--~L~~~~~~~ 421 (427)
..++.++.+++.+||+.||++|||+.|+++ -++.+.+.+
T Consensus 330 ~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~ 370 (377)
T 3byv_A 330 KNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTEL 370 (377)
T ss_dssp CCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHHHH
Confidence 113456889999999999999999999996 455555444
No 153
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-35 Score=287.65 Aligned_cols=140 Identities=24% Similarity=0.424 Sum_probs=121.7
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
.||||+++++++.. .+....++|||||+ |+|.+++.. ..+++..+..++.|++.||+||| +.||+|||
T Consensus 67 ~h~niv~l~~~~~~---~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrD 134 (388)
T 3oz6_A 67 GHENIVNLLNVLRA---DNDRDVYLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRD 134 (388)
T ss_dssp TCTTBCCEEEEEEC---TTSSCEEEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred CCCCCCeeeeEEec---CCCCEEEEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCC
Confidence 59999999998643 22346899999995 688888854 34889999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCC---------------------------cCCCccccccccccCC-CCcCccccc
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPE---------------------------ATNNFFNFQIAEYGMG-SEVSTSGDV 311 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~---------------------------~~~~~~~y~aPE~~~~-~~~~~~~Di 311 (427)
|||+|||++.++.+||+|||+|+.... ...||+.|+|||++.+ ..++.++||
T Consensus 135 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di 214 (388)
T 3oz6_A 135 MKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDM 214 (388)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHH
T ss_pred CCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhH
Confidence 999999999999999999999986532 1268899999999987 678999999
Q ss_pred hhHHHHHHHHHhCCCCCCcc
Q 042634 312 YSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 312 wS~G~vl~ell~g~~pf~~~ 331 (427)
||+||++|||++|+.||.+.
T Consensus 215 wSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 215 WSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp HHHHHHHHHHHHSSCSCCCS
T ss_pred HHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999764
No 154
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.6e-35 Score=282.80 Aligned_cols=195 Identities=14% Similarity=0.098 Sum_probs=157.0
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-ALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.|+|++++++.+.. ....++|||||++|+|.+++..... ....+++..++.++.||+.||+||| +.||+||
T Consensus 125 ~~~~iv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHr 196 (365)
T 3e7e_A 125 MQHMFMKFYSAHLF-----QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHG 196 (365)
T ss_dssp GGGGBCCEEEEEEC-----SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECC
T ss_pred hhhhhhhhheeeec-----CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecC
Confidence 48999999988544 5678999999999999999964321 1245999999999999999999999 8999999
Q ss_pred cccCCceeeCC-----------CCceEecccccccccC--------CcCCCccccccccccCCCCcCccccchhHHHHHH
Q 042634 259 DLKPSNVLLDG-----------ELTAHVGDFGLAKFLP--------EATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLL 319 (427)
Q Consensus 259 Dlkp~NIll~~-----------~~~~kL~DFG~a~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ 319 (427)
||||+|||++. ++.+||+|||+|+... ....||..|+|||++.+..++.++|||||||++|
T Consensus 197 DiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 276 (365)
T 3e7e_A 197 DIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVY 276 (365)
T ss_dssp CCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHH
T ss_pred CCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHH
Confidence 99999999988 8999999999997543 1237899999999999999999999999999999
Q ss_pred HHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCC
Q 042634 320 ETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSE 399 (427)
Q Consensus 320 ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~ 399 (427)
||++|+.||.....+... ....... . ...+.+.+++.+|++.
T Consensus 277 elltg~~pf~~~~~~~~~------------~~~~~~~----------------------~----~~~~~~~~~~~~~l~~ 318 (365)
T 3e7e_A 277 CMLFGTYMKVKNEGGECK------------PEGLFRR----------------------L----PHLDMWNEFFHVMLNI 318 (365)
T ss_dssp HHHHSSCCCEEEETTEEE------------ECSCCTT----------------------C----SSHHHHHHHHHHHHCC
T ss_pred HHHhCCCccccCCCCcee------------echhccc----------------------c----CcHHHHHHHHHHHcCC
Confidence 999999998653221100 0000000 0 0134567899999999
Q ss_pred CCCCC-CCHHHHHHHHHHHHHH
Q 042634 400 LPRER-MNMEEVAAQLLSFRNK 420 (427)
Q Consensus 400 dP~~R-pt~~ev~~~L~~~~~~ 420 (427)
+|.+| |+++++.+.|+++.++
T Consensus 319 ~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 319 PDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHH
Confidence 99999 6889999999888654
No 155
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.7e-36 Score=290.38 Aligned_cols=180 Identities=11% Similarity=-0.011 Sum_probs=136.9
Q ss_pred ccceeeeeecCCCcccccccchhhhhccCHHHH------HHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceE
Q 042634 201 SEALVYEFMVNGSLEEWLHPNREALKNLNLLQR------LSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAH 274 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~------~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~k 274 (427)
..++|||||+ |+|.+++.... ..+++..+ ..++.||+.||+||| ++||+||||||+|||++.++.+|
T Consensus 162 ~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~k 234 (371)
T 3q60_A 162 NYLLLMPAAS-VDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLM 234 (371)
T ss_dssp EEEEEECCCS-EEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEECTTSCEE
T ss_pred eEEEEecCCC-CCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCccCcCCHHHEEECCCCCEE
Confidence 4799999997 89999997643 23455555 788899999999999 89999999999999999999999
Q ss_pred ecccccccccCCcC---CCccccccccccCC--CCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccc
Q 042634 275 VGDFGLAKFLPEAT---NNFFNFQIAEYGMG--SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPER 349 (427)
Q Consensus 275 L~DFG~a~~~~~~~---~~~~~y~aPE~~~~--~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 349 (427)
|+|||+|+...... .+++.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 235 L~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~----------- 303 (371)
T 3q60_A 235 LGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS----------- 303 (371)
T ss_dssp ECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC-----------
T ss_pred EEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc-----------
Confidence 99999998775433 66789999999987 679999999999999999999999998642221100
Q ss_pred hhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 350 LAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
........... ... .......++.++.+++.+||+.||++|||++|+++
T Consensus 304 ~~~~~~~~~~~-------------~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 304 WKRPSLRVPGT-------------DSL-AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CCBCCTTSCCC-------------CSC-CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred hhhhhhhhccc-------------ccc-chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000000 000 00011234567899999999999999999999975
No 156
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.5e-35 Score=271.78 Aligned_cols=194 Identities=22% Similarity=0.288 Sum_probs=149.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++.........+++..++.++.|++.||+||| +.||+||
T Consensus 77 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~ 148 (285)
T 3is5_A 77 LDHPNIIKIFEVFED-----YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHK 148 (285)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCchHHhHHHheec-----CCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEEC
Confidence 479999999998543 56789999999999999998765444466999999999999999999999 8999999
Q ss_pred cccCCceee---CCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLL---DGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll---~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||++ +.++.+||+|||+++..... ..++..|+|||++. ..++.++||||+||++|||++|+.||.+
T Consensus 149 dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~ 227 (285)
T 3is5_A 149 DLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTG 227 (285)
T ss_dssp CCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCC
Confidence 999999999 45678999999999865432 27889999999975 5689999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.. ........... ...... .....+.++.+++.+||+.||++|||++|+
T Consensus 228 ~~-----~~~~~~~~~~~------~~~~~~--------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 276 (285)
T 3is5_A 228 TS-----LEEVQQKATYK------EPNYAV--------------------ECRPLTPQAVDLLKQMLTKDPERRPSAAQV 276 (285)
T ss_dssp SS-----HHHHHHHHHHC------CCCCCC----------------------CCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred CC-----HHHHHhhhccC------Cccccc--------------------ccCcCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 32 11111110000 000000 000123567899999999999999999999
Q ss_pred HH
Q 042634 411 AA 412 (427)
Q Consensus 411 ~~ 412 (427)
++
T Consensus 277 l~ 278 (285)
T 3is5_A 277 LH 278 (285)
T ss_dssp HT
T ss_pred hc
Confidence 86
No 157
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=279.47 Aligned_cols=218 Identities=19% Similarity=0.222 Sum_probs=151.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||++ |+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 57 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~ 124 (324)
T 3mtl_A 57 LKHANIVTLHDIIHT-----EKSLTLVFEYLD-KDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCH---RQKVLHR 124 (324)
T ss_dssp CCCTTBCCEEEEEEC-----SSCEEEEEECCS-EEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEEES
T ss_pred cCCCCCCeeeeEEee-----CCEEEEEecccc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCccCC
Confidence 469999999998543 567899999995 68888876543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+++..... ..+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 125 Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (324)
T 3mtl_A 125 DLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204 (324)
T ss_dssp SCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999865432 267899999999876 56899999999999999999999999764
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
... .....+......................... ................+.++.+++.+||+.||++|||++|++
T Consensus 205 ~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 280 (324)
T 3mtl_A 205 TVE--EQLHFIFRILGTPTEETWPGILSNEEFKTYN--YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAM 280 (324)
T ss_dssp SHH--HHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC--CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred CHH--HHHHHHHHHhCCCChHhchhhhcchhhcccc--cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHh
Confidence 211 1111111111111111111110000000000 000000000001122456688999999999999999999998
Q ss_pred H
Q 042634 412 A 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 281 ~ 281 (324)
T 3mtl_A 281 K 281 (324)
T ss_dssp T
T ss_pred c
Confidence 6
No 158
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.1e-35 Score=277.11 Aligned_cols=198 Identities=26% Similarity=0.380 Sum_probs=157.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ...++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 78 l~h~~i~~~~~~~~~------~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 145 (291)
T 1u46_A 78 LDHRNLIRLYGVVLT------PPMKMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLE---SKRFIHR 145 (291)
T ss_dssp CCCTTBCCEEEEECS------SSCEEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCcccEEEEEcc------CCceeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 469999999998643 23789999999999999986543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC---------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT---------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~---------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf 328 (427)
||||+||+++.++.+||+|||+++...... .++..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 146 dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~ 225 (291)
T 1u46_A 146 DLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225 (291)
T ss_dssp CCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred CCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 999999999999999999999998764322 56678999999988889999999999999999999 99999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... .+......... . ....+..++.++.+++.+||+.||++|||++
T Consensus 226 ~~~~~-----~~~~~~~~~~~----~-----------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 273 (291)
T 1u46_A 226 IGLNG-----SQILHKIDKEG----E-----------------------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFV 273 (291)
T ss_dssp TTCCH-----HHHHHHHHTSC----C-----------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred ccCCH-----HHHHHHHHccC----C-----------------------CCCCCcCcCHHHHHHHHHHccCCcccCcCHH
Confidence 75321 11111110000 0 0001123456789999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 042634 409 EVAAQLLSFRNK 420 (427)
Q Consensus 409 ev~~~L~~~~~~ 420 (427)
|+++.|+++...
T Consensus 274 ~l~~~l~~~~~~ 285 (291)
T 1u46_A 274 ALRDFLLEAQPT 285 (291)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHhCcc
Confidence 999999988543
No 159
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.7e-35 Score=296.06 Aligned_cols=195 Identities=22% Similarity=0.288 Sum_probs=155.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++..... ..+++..++.++.||+.||+||| +.||+||
T Consensus 241 l~hp~Iv~l~~~~~~-----~~~l~lVmEy~~gg~L~~~l~~~~~--~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHr 310 (576)
T 2acx_A 241 VNSRFVVSLAYAYET-----KDALCLVLTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLH---RERIVYR 310 (576)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHHSSSS--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred cCCCCEeeEEEEEee-----CCEEEEEEEcCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecc
Confidence 579999999988543 5678999999999999998865432 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+|||++.++.+||+|||+|+..... ..||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 311 DLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~ 390 (576)
T 2acx_A 311 DLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK 390 (576)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSS
T ss_pred CCchheEEEeCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccccc
Confidence 99999999999999999999999876443 3789999999999999999999999999999999999999976422
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----CHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-----NME 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-----t~~ 408 (427)
.. ............. . . .+...+.++.+++.+||+.||++|| |++
T Consensus 391 ~~-~~~~i~~~i~~~~--~----------------------~-----~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~ 440 (576)
T 2acx_A 391 KI-KREEVERLVKEVP--E----------------------E-----YSERFSPQARSLCSQLLCKDPAERLGCRGGSAR 440 (576)
T ss_dssp CC-CHHHHHHHHHHCC--C----------------------C-----CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHH
T ss_pred ch-hHHHHHHHhhccc--c----------------------c-----CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHH
Confidence 11 1111111100000 0 0 1112345689999999999999999 788
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
||+++
T Consensus 441 eil~H 445 (576)
T 2acx_A 441 EVKEH 445 (576)
T ss_dssp HHHTS
T ss_pred HHHhC
Confidence 88753
No 160
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6.7e-35 Score=276.62 Aligned_cols=195 Identities=16% Similarity=0.185 Sum_probs=153.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. ....++||||+++|+|.+++..... ..+++..++.++.|++.||+||| +.||+||
T Consensus 86 ~~~~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~ql~~~L~~LH---~~givH~ 155 (327)
T 3lm5_A 86 KSCPRVINLHEVYEN-----TSEIILILEYAAGGEIFSLCLPELA--EMVSENDVIRLIKQILEGVYYLH---QNNIVHL 155 (327)
T ss_dssp TTCTTBCCEEEEEEC-----SSEEEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred cCCCCEEEEEEEEEe-----CCeEEEEEEecCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 368999999998543 5678999999999999999865432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCC---CCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDG---ELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~---~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++. ++.+||+|||+++...... .|++.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 156 Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (327)
T 3lm5_A 156 DLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235 (327)
T ss_dssp CCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999987 7899999999998765432 789999999999999999999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... .....+....... . ......++..+.+++.+||+.||++|||++|+
T Consensus 236 ~~~~--~~~~~i~~~~~~~----~------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~l 285 (327)
T 3lm5_A 236 EDNQ--ETYLNISQVNVDY----S------------------------EETFSSVSQLATDFIQSLLVKNPEKRPTAEIC 285 (327)
T ss_dssp SSHH--HHHHHHHHTCCCC----C------------------------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCch--HHHHHHHhccccc----C------------------------chhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 3211 1100011100000 0 00112245668899999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
++.
T Consensus 286 l~h 288 (327)
T 3lm5_A 286 LSH 288 (327)
T ss_dssp TTC
T ss_pred hCC
Confidence 763
No 161
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.3e-35 Score=277.27 Aligned_cols=208 Identities=23% Similarity=0.266 Sum_probs=150.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. ....++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 68 ~~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 135 (316)
T 2ac3_A 68 QGHRNVLELIEFFEE-----EDRFYLVFEKMRGGSILSHIHKR----RHFNELEASVVVQDVASALDFLH---NKGIAHR 135 (316)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred cCCCCeeeEEEEEee-----CCEEEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---hCCceeC
Confidence 479999999998644 56789999999999999998654 45899999999999999999999 8899999
Q ss_pred cccCCceeeCCCCc---eEecccccccccCCc-------------CCCccccccccccCC-----CCcCccccchhHHHH
Q 042634 259 DLKPSNVLLDGELT---AHVGDFGLAKFLPEA-------------TNNFFNFQIAEYGMG-----SEVSTSGDVYSFGIL 317 (427)
Q Consensus 259 Dlkp~NIll~~~~~---~kL~DFG~a~~~~~~-------------~~~~~~y~aPE~~~~-----~~~~~~~DiwS~G~v 317 (427)
||||+||+++.++. +||+|||+++..... ..||..|+|||++.. ..++.++|||||||+
T Consensus 136 dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~i 215 (316)
T 2ac3_A 136 DLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215 (316)
T ss_dssp CCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHH
T ss_pred CCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHH
Confidence 99999999988765 999999999765321 158899999999875 557899999999999
Q ss_pred HHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcC
Q 042634 318 LLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCS 397 (427)
Q Consensus 318 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl 397 (427)
+|||++|+.||.........+... ...+.....+........ ...+.......+.++.+++.+||
T Consensus 216 l~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~-------------~~~~~~~~~~~~~~~~~li~~~L 280 (316)
T 2ac3_A 216 LYILLSGYPPFVGRCGSDCGWDRG--EACPACQNMLFESIQEGK-------------YEFPDKDWAHISCAAKDLISKLL 280 (316)
T ss_dssp HHHHHHSSCSCCCCCCSCSCC------CCHHHHHHHHHHHHHCC-------------CCCCHHHHTTSCHHHHHHHHHHS
T ss_pred HHHHHHCCCCCccccccccccccc--ccchhHHHHHHHHHhccC-------------cccCchhcccCCHHHHHHHHHHh
Confidence 999999999998653322111100 000000000000000000 00000001124567899999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 042634 398 SELPRERMNMEEVAAQ 413 (427)
Q Consensus 398 ~~dP~~Rpt~~ev~~~ 413 (427)
+.||++|||++|++++
T Consensus 281 ~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 281 VRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CSSTTTSCCHHHHHHS
T ss_pred hCChhhCCCHHHHhcC
Confidence 9999999999999874
No 162
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.8e-35 Score=278.47 Aligned_cols=174 Identities=20% Similarity=0.280 Sum_probs=137.8
Q ss_pred ccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEeccccc
Q 042634 201 SEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGL 280 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~ 280 (427)
..++|||||++|+|.+++...... ...++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||+
T Consensus 135 ~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 210 (332)
T 3qd2_B 135 YLYIQMQLCRKENLKDWMNRRCSL-EDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGL 210 (332)
T ss_dssp EEEEEEECCCSSCHHHHHHTCCSG-GGSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEEecCCCCHHHHHhcccCc-cchhhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCc
Confidence 378999999999999998765322 34567789999999999999999 89999999999999999999999999999
Q ss_pred ccccCCc------------------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 042634 281 AKFLPEA------------------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342 (427)
Q Consensus 281 a~~~~~~------------------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~ 342 (427)
++..... ..||+.|+|||++.+..++.++|||||||++|||++|..|+... ....
T Consensus 211 a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~ 283 (332)
T 3qd2_B 211 VTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRII 283 (332)
T ss_dssp CEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHH
T ss_pred ccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHH
Confidence 9876543 25889999999999999999999999999999999987764321 0000
Q ss_pred HHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 343 KEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
...... .........+.++.+++.+||+.||++|||++|++++
T Consensus 284 ~~~~~~----------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 284 TDVRNL----------------------------KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHTT----------------------------CCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHhhcc----------------------------CCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 000000 0000223445667899999999999999999999863
No 163
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.7e-35 Score=272.31 Aligned_cols=188 Identities=23% Similarity=0.345 Sum_probs=142.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+ ++++.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 70 l~h~~i~~~~~~~~~-----~~~~~lv~e~~-~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~ 136 (275)
T 2eue_A 70 LRHPHIIKLYDVIKS-----KDEIIMVIEYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCH---RHKIVHR 136 (275)
T ss_dssp CCCTTBCCEEEEEEC-----SSCEEEEEECC-CEEHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCeEEEEEEEec-----CCeEEEEehhc-CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeec
Confidence 469999999998543 56789999999 77888877654 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-----CCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.++...... .+|..|+|||++.+..+ +.++||||+||++|||++|+.||....
T Consensus 137 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (275)
T 2eue_A 137 DLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216 (275)
T ss_dssp CCSGGGEEECTTSCEEECCSSCC---------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCChHhEEECCCCCEEEeecccceeccCcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999998654432 68899999999988765 789999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
............ .. .+...+.++.+++.+||+.||++|||++|+++
T Consensus 217 -----~~~~~~~~~~~~-~~----------------------------~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 217 -----IPVLFKNISNGV-YT----------------------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----HHHHHHHHHHTC-CC----------------------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----HHHHHHHHHhCC-CC----------------------------CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 111111100000 00 11123456889999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 263 h 263 (275)
T 2eue_A 263 D 263 (275)
T ss_dssp C
T ss_pred C
Confidence 4
No 164
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-35 Score=271.92 Aligned_cols=189 Identities=21% Similarity=0.291 Sum_probs=135.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 68 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 136 (278)
T 3cok_A 68 LKHPSILELYNYFED-----SNYVYLVLEMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLH---SHGILHR 136 (278)
T ss_dssp BCCTTBCCEEEEEEC-----SSEEEEEEECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCeEeEEEEEcc-----CCeEEEEEecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 469999999998543 567899999999999999987543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 137 dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 216 (278)
T 3cok_A 137 DLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT 216 (278)
T ss_dssp SCCGGGEEECTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred CCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChh
Confidence 99999999999999999999999875432 267889999999999899999999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
... ... ....... ..+...+.++.+++.+||+.||++|||++|+++
T Consensus 217 ~~~-----~~~--------~~~~~~~---------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 217 VKN-----TLN--------KVVLADY---------------------EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CC------------------CCSSCC---------------------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHH-----HHH--------HHhhccc---------------------CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 111 000 0000000 011123456889999999999999999999986
No 165
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.2e-35 Score=283.21 Aligned_cols=195 Identities=21% Similarity=0.277 Sum_probs=153.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC-Ceee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET-PIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~-~ivH 257 (427)
++||||+++++.+.. ....++||||++ |+|.+++.........+++..++.++.||+.||+||| ++ ||+|
T Consensus 107 ~~h~~iv~~~~~~~~-----~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH 177 (340)
T 3an0_A 107 VDCPFTVTFYGALFR-----EGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIH 177 (340)
T ss_dssp CCCTTTCCEEEEEEC-----SSCEEEEECCCS-EEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCC
T ss_pred cCCCcEEEEeeEEEe-----CCcEEEEHHHhh-CcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeec
Confidence 679999999998644 457899999996 5998888653333356999999999999999999999 65 9999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccC----CCCcCccccchhHHHHHHHHHhCCCCC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGM----GSEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~----~~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
|||||+||+++.++.+||+|||+++..... ..||..|+|||++. ...++.++|||||||++|||++|+.||
T Consensus 178 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~ 257 (340)
T 3an0_A 178 RDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 257 (340)
T ss_dssp CSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSS
T ss_pred CCCCHHHEEECCCCCEEEeeCCCceecccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999999876543 37899999999964 347899999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.........+........+ ......++.++.+++.+||+.||++|||++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ 306 (340)
T 3an0_A 258 DSWGTPFQQLKQVVEEPSP-------------------------------QLPADKFSAEFVDFTSQCLKKNSKERPTYP 306 (340)
T ss_dssp CCCSCHHHHHHHHHHSCCC-------------------------------CCCGGGSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred ccccchHHHHHHHhcCCCC-------------------------------CCCcccCCHHHHHHHHHHccCCcccCcCHH
Confidence 7532111111111110000 001122456789999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|+++.
T Consensus 307 ell~h 311 (340)
T 3an0_A 307 ELMQH 311 (340)
T ss_dssp HHTTS
T ss_pred HHhcC
Confidence 99873
No 166
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.6e-35 Score=283.12 Aligned_cols=191 Identities=22% Similarity=0.315 Sum_probs=150.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+. |++.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 111 l~hpniv~~~~~~~~-----~~~~~lv~e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 178 (348)
T 1u5q_A 111 LRHPNTIQYRGCYLR-----EHTAWLVMEYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH---SHNMIHR 178 (348)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCC
T ss_pred CCCCCEeeEEEEEEE-----CCeEEEEEecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeC
Confidence 579999999998654 567899999995 78877775332 46899999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--CCCccccccccccC---CCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--TNNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--~~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
||||+||+++.++.+||+|||+++..... ..||+.|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 179 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 258 (348)
T 1u5q_A 179 DVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 258 (348)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred CCCHHHEEECCCCCEEEeeccCceecCCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 99999999999999999999999876543 37899999999984 56789999999999999999999999975311
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
........... .+. .....++..+.+++.+||+.||++|||++|+++.
T Consensus 259 -----~~~~~~~~~~~-----~~~----------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 259 -----MSALYHIAQNE-----SPA----------------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp -----HHHHHHHHHSC-----CCC----------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred -----HHHHHHHHhcC-----CCC----------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11111100000 000 0111234568899999999999999999999864
No 167
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.1e-35 Score=293.91 Aligned_cols=196 Identities=20% Similarity=0.270 Sum_probs=155.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++.........+++..++.++.||+.||+||| +.||+||
T Consensus 242 l~hp~Iv~l~~~~~~-----~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHr 313 (543)
T 3c4z_A 242 VHSRFIVSLAYAFET-----KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYR 313 (543)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred cCCCCEeeEEEEEee-----CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCccc
Confidence 579999999988543 56789999999999999988654332346999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+++..... ..||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 314 DLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 314 DLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred CCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence 99999999999999999999999875432 278999999999999999999999999999999999999997642
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH-----
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM----- 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~----- 407 (427)
.. ............... ..+...+.++.+++.+||+.||++||++
T Consensus 394 ~~-~~~~~~~~~i~~~~~-----------------------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a 443 (543)
T 3c4z_A 394 EK-VENKELKQRVLEQAV-----------------------------TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC 443 (543)
T ss_dssp CC-CCHHHHHHHHHHCCC-----------------------------CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBS
T ss_pred cc-hhHHHHHHHHhhccc-----------------------------CCCcccCHHHHHHHHHhccCCHhHCCCCcccCH
Confidence 21 111121111111000 0112234568899999999999999975
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
+||++
T Consensus 444 ~ei~~ 448 (543)
T 3c4z_A 444 DGLRT 448 (543)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 55553
No 168
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=5.8e-35 Score=300.91 Aligned_cols=197 Identities=22% Similarity=0.369 Sum_probs=159.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+. ....++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||
T Consensus 448 l~HpnIv~l~~~~~------~~~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givHr 515 (656)
T 2j0j_A 448 FDHPHIVKLIGVIT------ENPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLE---SKRFVHR 515 (656)
T ss_dssp CCCTTBCCEEEEEC------SSSCEEEEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCCCeEEEEEe------cCceEEEEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 57999999999853 245799999999999999986543 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC-------CCccccccccccCCCCcCccccchhHHHHHHHHHh-CCCCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT-------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT-GKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~-g~~pf~~ 330 (427)
||||+|||++.++.+||+|||+|+...... .++..|+|||++.+..++.++|||||||++|||++ |..||.+
T Consensus 516 Dikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 516 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp CCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999998764432 45678999999988899999999999999999997 9999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
.... .....+..... ...+..++..+.+++.+||+.||++|||+.|+
T Consensus 596 ~~~~--~~~~~i~~~~~-------------------------------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el 642 (656)
T 2j0j_A 596 VKNN--DVIGRIENGER-------------------------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642 (656)
T ss_dssp CCHH--HHHHHHHHTCC-------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCHH--HHHHHHHcCCC-------------------------------CCCCccccHHHHHHHHHHcCCChhHCcCHHHH
Confidence 3211 11111111000 00122345678999999999999999999999
Q ss_pred HHHHHHHHHH
Q 042634 411 AAQLLSFRNK 420 (427)
Q Consensus 411 ~~~L~~~~~~ 420 (427)
++.|+++.++
T Consensus 643 ~~~L~~il~~ 652 (656)
T 2j0j_A 643 KAQLSTILEE 652 (656)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999765
No 169
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7e-35 Score=274.28 Aligned_cols=198 Identities=20% Similarity=0.234 Sum_probs=151.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 91 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~ 158 (309)
T 2h34_A 91 LQEPHVVPIHDFGEI-----DGQLYVDMRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAH---AAGATHR 158 (309)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred cCCCCeeEEEEEEee-----CCeEEEEEEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcC
Confidence 579999999998644 56789999999999999998653 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 159 dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (309)
T 2h34_A 159 DVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD 238 (309)
T ss_dssp CCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred CCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence 99999999999999999999999865432 26788999999999999999999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-CHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-NMEEV 410 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-t~~ev 410 (427)
... .+...+....+. . ...+..++.++.+++.+||+.||++|| |++|+
T Consensus 239 ~~~--~~~~~~~~~~~~-~----------------------------~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l 287 (309)
T 2h34_A 239 QLS--VMGAHINQAIPR-P----------------------------STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDL 287 (309)
T ss_dssp HHH--HHHHHHHSCCCC-G----------------------------GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHH
T ss_pred hHH--HHHHHhccCCCC-c----------------------------cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHH
Confidence 110 111111110000 0 001122455688999999999999999 99999
Q ss_pred HHHHHHHHH
Q 042634 411 AAQLLSFRN 419 (427)
Q Consensus 411 ~~~L~~~~~ 419 (427)
++.|+++..
T Consensus 288 ~~~l~~~l~ 296 (309)
T 2h34_A 288 SAAAHAALA 296 (309)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHHH
Confidence 999998743
No 170
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.2e-34 Score=274.12 Aligned_cols=193 Identities=19% Similarity=0.255 Sum_probs=154.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 72 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~ 139 (321)
T 2a2a_A 72 VLHHNVITLHDVYEN-----RTDVVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLH---TKKIAHF 139 (321)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHHTC----SCEEHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCcceEEEEEec-----CCEEEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 469999999998543 56789999999999999998754 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCC----ceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGEL----TAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~----~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++ .+||+|||+++..... ..||..|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 140 dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 219 (321)
T 2a2a_A 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219 (321)
T ss_dssp CCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred CCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCC
Confidence 9999999999887 7999999999876443 268899999999999999999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
+... ............ ..+ .......+..+.+++.+||+.||++|||++|
T Consensus 220 ~~~~-----~~~~~~i~~~~~--~~~-----------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e 269 (321)
T 2a2a_A 220 GDTK-----QETLANITSVSY--DFD-----------------------EEFFSHTSELAKDFIRKLLVKETRKRLTIQE 269 (321)
T ss_dssp CSSH-----HHHHHHHHTTCC--CCC-----------------------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHH
T ss_pred CCCH-----HHHHHHHHhccc--ccC-----------------------hhhhcccCHHHHHHHHHHcCCChhhCcCHHH
Confidence 5311 111111000000 000 0011223456899999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
++++
T Consensus 270 ~l~h 273 (321)
T 2a2a_A 270 ALRH 273 (321)
T ss_dssp HHHS
T ss_pred HhcC
Confidence 9863
No 171
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.1e-35 Score=275.41 Aligned_cols=197 Identities=23% Similarity=0.272 Sum_probs=154.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC----
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP---- 254 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~---- 254 (427)
++||||+++++.+... .+...++||||+++++|.+++.........+++..++.++.|++.||+||| +.|
T Consensus 62 l~h~~i~~~~~~~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~ 135 (279)
T 2w5a_A 62 LKHPNIVRYYDRIIDR---TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGH 135 (279)
T ss_dssp CCCTTBCCEEEEEEEG---GGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC----
T ss_pred cCCCCCCeEEEEEecC---CCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCC
Confidence 4699999999875331 245679999999999999999765433345999999999999999999999 667
Q ss_pred -eeeccccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCC
Q 042634 255 -IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 255 -ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
|+||||||+||+++.++.+||+|||.++...... .++..|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 136 ~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 215 (279)
T 2w5a_A 136 TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215 (279)
T ss_dssp --CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCS
T ss_pred eeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999998765432 678899999999998999999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|..... ..+...+...... . .+..++.++.+++.+||+.||++|||+
T Consensus 216 ~~~~~~--~~~~~~i~~~~~~---~----------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~ 262 (279)
T 2w5a_A 216 FTAFSQ--KELAGKIREGKFR---R----------------------------IPYRYSDELNEIITRMLNLKDYHRPSV 262 (279)
T ss_dssp SCCSSH--HHHHHHHHHTCCC---C----------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CcccCH--HHHHHHHhhcccc---c----------------------------CCcccCHHHHHHHHHHcCCCcccCCCH
Confidence 975421 1111111110000 0 112245668999999999999999999
Q ss_pred HHHHHHH
Q 042634 408 EEVAAQL 414 (427)
Q Consensus 408 ~ev~~~L 414 (427)
+|+++.+
T Consensus 263 ~~ll~~~ 269 (279)
T 2w5a_A 263 EEILENP 269 (279)
T ss_dssp HHHHTST
T ss_pred HHHHhCh
Confidence 9999765
No 172
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5.9e-35 Score=277.22 Aligned_cols=221 Identities=20% Similarity=0.209 Sum_probs=155.1
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
.||||+++++.+... .....++||||+++++|.+++. .+++..++.++.|++.||+||| +.||+|||
T Consensus 89 ~~~~i~~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~D 155 (330)
T 3nsz_A 89 GGPNIITLADIVKDP---VSRTPALVFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCH---SMGIMHRD 155 (330)
T ss_dssp TSTTBCCEEEEEECT---TTCCEEEEEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred CCCCEEEeeeeeccC---CCCceEEEEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCC
Confidence 599999999986431 2456799999999999988873 3788999999999999999999 89999999
Q ss_pred ccCCceeeCCCC-ceEecccccccccCCc-----CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 260 LKPSNVLLDGEL-TAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 260 lkp~NIll~~~~-~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||+|||++.++ .+||+|||+|+..... ..++..|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 156 ikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~ 235 (330)
T 3nsz_A 156 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 235 (330)
T ss_dssp CSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred CCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 999999999776 8999999999865432 268889999999887 678999999999999999999999996532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccc-cc---hhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREE-GE---TSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.....+.............+.++......... .. .........+.........+.++.+++.+||+.||++|||++
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~ 315 (330)
T 3nsz_A 236 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315 (330)
T ss_dssp SHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred chHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHH
Confidence 22222222222111111111111000000000 00 000000001111112233567789999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|++++
T Consensus 316 e~l~h 320 (330)
T 3nsz_A 316 EAMEH 320 (330)
T ss_dssp HHHTS
T ss_pred HHhcC
Confidence 99863
No 173
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.8e-35 Score=280.06 Aligned_cols=221 Identities=18% Similarity=0.218 Sum_probs=155.4
Q ss_pred cccccchhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++++.... .......++||||+ +++|.+++.. ..+++..+..++.|++.||+||| +.||+|
T Consensus 81 l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH 151 (367)
T 1cm8_A 81 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIH---AAGIIH 151 (367)
T ss_dssp CCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred CCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 46999999999865421 11224569999999 8899998864 34899999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc---CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+||+++.++.+||+|||+|+..... ..+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+...
T Consensus 152 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 231 (367)
T 1cm8_A 152 RDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH 231 (367)
T ss_dssp CCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999999999999999999999876543 378899999999877 6799999999999999999999999975321
Q ss_pred CCccHHHHHHHhcc--cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 334 GNLTLHNFVKEALP--ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 334 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
. ..+......... ......+........... ........+.. .....+..+.+++.+||+.||++|||++|++
T Consensus 232 ~-~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l 306 (367)
T 1cm8_A 232 L-DQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG--LPELEKKDFAS--ILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 306 (367)
T ss_dssp H-HHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHH--SCCCCCCCGGG--TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred H-HHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHh--CCCCCCCCHHH--HCCCCCHHHHHHHHHHccCChhHCCCHHHHh
Confidence 1 111111111111 111110100000000000 00000000000 1123456789999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 307 ~h 308 (367)
T 1cm8_A 307 AH 308 (367)
T ss_dssp HS
T ss_pred cC
Confidence 73
No 174
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.1e-34 Score=277.87 Aligned_cols=226 Identities=18% Similarity=0.206 Sum_probs=151.6
Q ss_pred cccccchhhhccccccCC---CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDF---QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~---~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++||||+++++.+..... ......++||||++ |+|.+.+.... ..+++..++.++.|++.||+||| +.||
T Consensus 73 l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~i 145 (351)
T 3mi9_A 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIH---RNKI 145 (351)
T ss_dssp CCCTTBCCEEEEEEEC--------CEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred ccCCCcccHhheeeccccccccCCceEEEEEeccC-CCHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCe
Confidence 469999999998755321 11346799999995 57777765443 45899999999999999999999 8999
Q ss_pred eeccccCCceeeCCCCceEecccccccccCC----------cCCCccccccccccCC-CCcCccccchhHHHHHHHHHhC
Q 042634 256 VHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----------ATNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTG 324 (427)
Q Consensus 256 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~----------~~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g 324 (427)
+||||||+||+++.++.+||+|||+|+.... ...+|+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 146 vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 225 (351)
T 3mi9_A 146 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225 (351)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHS
T ss_pred eCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999986531 1267889999999876 5589999999999999999999
Q ss_pred CCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCC
Q 042634 325 KRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRER 404 (427)
Q Consensus 325 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R 404 (427)
+.||.+... ......+.........+.................................+..+.+++.+||+.||++|
T Consensus 226 ~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 303 (351)
T 3mi9_A 226 SPIMQGNTE--QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 303 (351)
T ss_dssp SCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGS
T ss_pred CCCCCCCCh--HHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhC
Confidence 999976321 111111111110000000000000000000000000000000000111124568899999999999999
Q ss_pred CCHHHHHHH
Q 042634 405 MNMEEVAAQ 413 (427)
Q Consensus 405 pt~~ev~~~ 413 (427)
||++|++++
T Consensus 304 ~t~~e~l~h 312 (351)
T 3mi9_A 304 IDSDDALNH 312 (351)
T ss_dssp CCHHHHHTS
T ss_pred CCHHHHhCC
Confidence 999999864
No 175
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=284.77 Aligned_cols=193 Identities=18% Similarity=0.186 Sum_probs=150.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+.. ....++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.||+||
T Consensus 118 ~~hp~Iv~l~~~~~~-----~~~~~lVmE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~giiHr 186 (412)
T 2vd5_A 118 GDRRWITQLHFAFQD-----ENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVH---RLGYVHR 186 (412)
T ss_dssp SCTTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred cCCCCeeeEEEEEee-----CCEEEEEEcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 479999999988543 567899999999999999996532 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccC-------CCCcCccccchhHHHHHHHHHhC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGM-------GSEVSTSGDVYSFGILLLETFTG 324 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~-------~~~~~~~~DiwS~G~vl~ell~g 324 (427)
||||+|||++.++.+||+|||+|+..... ..||+.|+|||++. ...++.++|||||||++|||++|
T Consensus 187 DLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG 266 (412)
T 2vd5_A 187 DIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG 266 (412)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHS
T ss_pred ccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhC
Confidence 99999999999999999999999876432 27899999999987 45789999999999999999999
Q ss_pred CCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCC
Q 042634 325 KRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRER 404 (427)
Q Consensus 325 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~R 404 (427)
+.||..... .+......... ....-+ ......+.++.+++.+||. +|++|
T Consensus 267 ~~Pf~~~~~-----~~~~~~i~~~~-~~~~~p-----------------------~~~~~~s~~~~dli~~lL~-~p~~R 316 (412)
T 2vd5_A 267 QTPFYADST-----AETYGKIVHYK-EHLSLP-----------------------LVDEGVPEEARDFIQRLLC-PPETR 316 (412)
T ss_dssp SCTTCCSSH-----HHHHHHHHTHH-HHCCCC---------------------------CCCHHHHHHHHTTSS-CGGGC
T ss_pred CCCCCCCCH-----HHHHHHHHhcc-cCcCCC-----------------------ccccCCCHHHHHHHHHHcC-Chhhc
Confidence 999975311 11111110000 000000 0112245678999999999 99998
Q ss_pred ---CCHHHHHH
Q 042634 405 ---MNMEEVAA 412 (427)
Q Consensus 405 ---pt~~ev~~ 412 (427)
|+++|+++
T Consensus 317 lgr~~~~ei~~ 327 (412)
T 2vd5_A 317 LGRGGAGDFRT 327 (412)
T ss_dssp TTTTTHHHHHT
T ss_pred CCCCCHHHHhc
Confidence 68999865
No 176
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=278.29 Aligned_cols=199 Identities=21% Similarity=0.253 Sum_probs=151.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 86 l~h~~iv~~~~~~~~-----~~~~~iv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~ 154 (319)
T 2y4i_B 86 TRHENVVLFMGACMS-----PPHLAIITSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLH---AKGILHK 154 (319)
T ss_dssp CCCTTBCCCCEEEEC-----SSCEEEECBCCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCEeEEEEEEec-----CCceEEEeecccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 469999999998654 456899999999999999997653 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC-----------cCCCccccccccccCC---------CCcCccccchhHHHHH
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE-----------ATNNFFNFQIAEYGMG---------SEVSTSGDVYSFGILL 318 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~-----------~~~~~~~y~aPE~~~~---------~~~~~~~DiwS~G~vl 318 (427)
||||+||+++ ++.+||+|||+++.... ...|+..|+|||++.. ..++.++|||||||++
T Consensus 155 dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il 233 (319)
T 2y4i_B 155 DLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIW 233 (319)
T ss_dssp CCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHH
T ss_pred CCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHH
Confidence 9999999998 67999999999875421 1257889999999864 4578999999999999
Q ss_pred HHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCC
Q 042634 319 LETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSS 398 (427)
Q Consensus 319 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~ 398 (427)
|||++|+.||...... .....+...... .. ....++.++.+++.+||+
T Consensus 234 ~el~~g~~p~~~~~~~--~~~~~~~~~~~~--------~~----------------------~~~~~~~~l~~li~~~l~ 281 (319)
T 2y4i_B 234 YELHAREWPFKTQPAE--AIIWQMGTGMKP--------NL----------------------SQIGMGKEISDILLFCWA 281 (319)
T ss_dssp HHHHHSSCSSSSCCHH--HHHHHHHTTCCC--------CC----------------------CCSSCCTTHHHHHHHHHC
T ss_pred HHHHhCCCCCCCCCHH--HHHHHhccCCCC--------CC----------------------CcCCCCHHHHHHHHHHhc
Confidence 9999999999753211 111111110000 00 001123458899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHH
Q 042634 399 ELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 399 ~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
.||++|||++|+++.|+++.++.
T Consensus 282 ~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 282 FEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp SSTTTSCCHHHHHHHHTTC----
T ss_pred CChhhCcCHHHHHHHHHHHHHhh
Confidence 99999999999999999987653
No 177
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.4e-35 Score=277.57 Aligned_cols=197 Identities=20% Similarity=0.179 Sum_probs=149.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-----------------------------------
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE----------------------------------- 223 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------------------- 223 (427)
++||||+++++++.. ....++||||+++|+|.+++.....
T Consensus 85 l~hpniv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (345)
T 3hko_A 85 LHHPNIARLYEVYED-----EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRE 159 (345)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEE
T ss_pred CCCCCcceeehhhcc-----CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccc
Confidence 469999999998643 5678999999999999998852100
Q ss_pred -hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCC--ceEecccccccccCC----------cCCC
Q 042634 224 -ALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGEL--TAHVGDFGLAKFLPE----------ATNN 290 (427)
Q Consensus 224 -~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~--~~kL~DFG~a~~~~~----------~~~~ 290 (427)
....+++..++.++.|++.||+||| +.||+||||||+||+++.++ .+||+|||+++.... ...|
T Consensus 160 ~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g 236 (345)
T 3hko_A 160 SLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236 (345)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CC
T ss_pred cccccccHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCC
Confidence 0123567889999999999999999 88999999999999998766 899999999986422 2368
Q ss_pred ccccccccccCC--CCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchh
Q 042634 291 FFNFQIAEYGMG--SEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETS 368 (427)
Q Consensus 291 ~~~y~aPE~~~~--~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (427)
|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.... ............. ..
T Consensus 237 t~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~-----~~------------- 297 (345)
T 3hko_A 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA-DTISQVLNKKLCF-----EN------------- 297 (345)
T ss_dssp CGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCT-----TS-------------
T ss_pred CccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHHhccccc-----CC-------------
Confidence 899999999875 67899999999999999999999999753211 1111111110000 00
Q ss_pred hhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 369 KANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
......+.++.+++.+||+.||++|||+.|+++.
T Consensus 298 -----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 298 -----------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp -----------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred -----------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0111234568899999999999999999999874
No 178
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.1e-34 Score=282.38 Aligned_cols=228 Identities=18% Similarity=0.221 Sum_probs=156.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC-Ceee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET-PIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~-~ivH 257 (427)
..||||+++++.+.... ......++||||+ ++++.+++..... ..+++..++.++.||+.||+||| ++ ||+|
T Consensus 98 ~~~~~iv~~~~~~~~~~-~~~~~~~lv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH---~~~givH 170 (397)
T 1wak_A 98 PNREMVVQLLDDFKISG-VNGTHICMVFEVL-GHHLLKWIIKSNY--QGLPLPCVKKIIQQVLQGLDYLH---TKCRIIH 170 (397)
T ss_dssp GGGGGBCCEEEEEEEEE-TTEEEEEEEECCC-CCBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCEEC
T ss_pred CCcceeeeeecceeecC-CCCceEEEEEecc-CccHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHH---HhCCEec
Confidence 34899999999865321 1345789999999 6777766654322 45899999999999999999999 77 9999
Q ss_pred ccccCCceeeCCCC-------------------------------------------------ceEecccccccccCCc-
Q 042634 258 CDLKPSNVLLDGEL-------------------------------------------------TAHVGDFGLAKFLPEA- 287 (427)
Q Consensus 258 rDlkp~NIll~~~~-------------------------------------------------~~kL~DFG~a~~~~~~- 287 (427)
|||||+|||++.++ .+||+|||.|+.....
T Consensus 171 rDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~ 250 (397)
T 1wak_A 171 TDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF 250 (397)
T ss_dssp CCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS
T ss_pred CCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC
Confidence 99999999998775 7999999999876543
Q ss_pred --CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHH-----HHHHHh--cccchhc--ccC-
Q 042634 288 --TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLH-----NFVKEA--LPERLAE--IVD- 355 (427)
Q Consensus 288 --~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~-----~~~~~~--~~~~~~~--~~~- 355 (427)
..||..|+|||++.+..++.++|||||||++|||++|+.||........... ...... .+..... ...
T Consensus 251 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 330 (397)
T 1wak_A 251 TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSK 330 (397)
T ss_dssp CSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGG
T ss_pred ccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccc
Confidence 3789999999999999999999999999999999999999986533322111 111100 1100000 000
Q ss_pred ccccccccccc----hhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 356 PVLLVEREEGE----TSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 356 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
........... ...............+...+..+.+++.+||+.||++|||++|++++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 331 EFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp GTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00000000000 00000000000112346678889999999999999999999999863
No 179
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.6e-35 Score=282.76 Aligned_cols=189 Identities=24% Similarity=0.361 Sum_probs=145.2
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
.||||+++++++.. ....++||| +.+++|.+++... ..+++..+..++.||+.||+||| +.||+|||
T Consensus 114 ~~~~iv~~~~~~~~-----~~~~~lv~E-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrD 180 (390)
T 2zmd_A 114 HSDKIIRLYDYEIT-----DQYIYMVME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSD 180 (390)
T ss_dssp TCTTBCCEEEEEEC-----SSEEEEEEE-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCC
T ss_pred CCCeEEEEEEEEec-----CCEEEEEEe-cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecC
Confidence 37999999987544 456899999 5589999998754 35888999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccCC-----------CCcCccccchhHHHHHHH
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMG-----------SEVSTSGDVYSFGILLLE 320 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~-----------~~~~~~~DiwS~G~vl~e 320 (427)
|||+|||++ ++.+||+|||+|+.... ...||+.|+|||++.+ ..++.++|||||||++||
T Consensus 181 lkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~e 259 (390)
T 2zmd_A 181 LKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 259 (390)
T ss_dssp CCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHH
T ss_pred CCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHH
Confidence 999999995 57899999999987543 2368999999999865 368999999999999999
Q ss_pred HHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCC
Q 042634 321 TFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSEL 400 (427)
Q Consensus 321 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d 400 (427)
|++|+.||...... . ..... ++++..... .+...+.++.+++.+||+.|
T Consensus 260 ll~G~~Pf~~~~~~---~-~~~~~--------~~~~~~~~~-------------------~~~~~~~~~~~li~~~L~~d 308 (390)
T 2zmd_A 260 MTYGKTPFQQIINQ---I-SKLHA--------IIDPNHEIE-------------------FPDIPEKDLQDVLKCCLKRD 308 (390)
T ss_dssp HHHSSCTTTTCCCH---H-HHHHH--------HHCTTSCCC-------------------CCCCSCHHHHHHHHHHTCSS
T ss_pred HHHCCCcchhhhHH---H-HHHHH--------HhCccccCC-------------------CCccchHHHHHHHHHHcccC
Confidence 99999999753211 1 11111 111100000 00111346889999999999
Q ss_pred CCCCCCHHHHHHH
Q 042634 401 PRERMNMEEVAAQ 413 (427)
Q Consensus 401 P~~Rpt~~ev~~~ 413 (427)
|++|||++|+++.
T Consensus 309 P~~Rps~~ell~h 321 (390)
T 2zmd_A 309 PKQRISIPELLAH 321 (390)
T ss_dssp TTTSCCHHHHHTS
T ss_pred hhhCCCHHHHhhC
Confidence 9999999999864
No 180
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.7e-35 Score=288.48 Aligned_cols=143 Identities=24% Similarity=0.349 Sum_probs=125.6
Q ss_pred ccccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 178 FIRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 178 ll~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
...|+||+++++.+.. ....++||||+ +++|.+++..... ..+++..++.++.||+.||+||| +.||+|
T Consensus 155 ~~~~~~iv~~~~~~~~-----~~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH 223 (429)
T 3kvw_A 155 KDNTMNVIHMLENFTF-----RNHICMTFELL-SMNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALH---KNRIIH 223 (429)
T ss_dssp TTSCSCBCCEEEEEEE-----TTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HHTEEC
T ss_pred ccCCcCEEEEEeeccc-----CCeEEEEEecc-CCCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeec
Confidence 3578999999998644 46789999999 5799998865432 45899999999999999999999 889999
Q ss_pred ccccCCceeeCCCCc--eEecccccccccCCcC---CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 258 CDLKPSNVLLDGELT--AHVGDFGLAKFLPEAT---NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 258 rDlkp~NIll~~~~~--~kL~DFG~a~~~~~~~---~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|||||+|||++.++. +||+|||+|+...... .+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 224 rDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp SCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 999999999999887 9999999998654433 7889999999999999999999999999999999999999764
No 181
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.5e-35 Score=278.53 Aligned_cols=201 Identities=26% Similarity=0.391 Sum_probs=158.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh---hhhccCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE---ALKNLNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
++||||+++++.+.. ....++||||+++|+|.+++..... ....+++..++.++.|++.||+||| +.||
T Consensus 90 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i 161 (327)
T 2yfx_A 90 FNHQNIVRCIGVSLQ-----SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHF 161 (327)
T ss_dssp CCCTTBCCEEEEECS-----SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTC
T ss_pred CCCCCCCeEEEEEcC-----CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCe
Confidence 479999999998544 4567999999999999999865421 1134889999999999999999999 8999
Q ss_pred eeccccCCceeeCC---CCceEecccccccccCC--------cCCCccccccccccCCCCcCccccchhHHHHHHHHHh-
Q 042634 256 VHCDLKPSNVLLDG---ELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFT- 323 (427)
Q Consensus 256 vHrDlkp~NIll~~---~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~- 323 (427)
+||||||+||+++. +..+||+|||+++.... ...++..|+|||++.+..++.++|||||||++|||++
T Consensus 162 ~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~ 241 (327)
T 2yfx_A 162 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 241 (327)
T ss_dssp CCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred ecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcC
Confidence 99999999999984 45699999999975422 1256788999999988899999999999999999998
Q ss_pred CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 324 GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 324 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
|..||.... .......+...... ..+..++..+.+++.+||+.||++
T Consensus 242 g~~p~~~~~--~~~~~~~~~~~~~~-------------------------------~~~~~~~~~l~~li~~~l~~dp~~ 288 (327)
T 2yfx_A 242 GYMPYPSKS--NQEVLEFVTSGGRM-------------------------------DPPKNCPGPVYRIMTQCWQHQPED 288 (327)
T ss_dssp SCCSSTTCC--HHHHHHHHHTTCCC-------------------------------CCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred CCCCCCCcC--HHHHHHHHhcCCCC-------------------------------CCCCCCCHHHHHHHHHHhcCChhh
Confidence 999987531 11111111110000 011224567899999999999999
Q ss_pred CCCHHHHHHHHHHHHHH
Q 042634 404 RMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 404 Rpt~~ev~~~L~~~~~~ 420 (427)
|||++|+++.|+.+...
T Consensus 289 Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 289 RPNFAIILERIEYCTQD 305 (327)
T ss_dssp SCCHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHhcC
Confidence 99999999999988653
No 182
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.2e-34 Score=269.12 Aligned_cols=193 Identities=19% Similarity=0.242 Sum_probs=152.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 62 l~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 129 (284)
T 3kk8_A 62 LQHPNIVRLHDSIQE-----ESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCH---SNGIVHR 129 (284)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred cCCCCcCeEEEEEEc-----CCEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcC
Confidence 469999999998543 56779999999999998887644 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCc---eEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGELT---AHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~~---~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++.++. +||+|||.+...... ..++..|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 130 dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 209 (284)
T 3kk8_A 130 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209 (284)
T ss_dssp CCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC
Confidence 99999999976654 999999999766443 2788999999999999999999999999999999999999965
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+...... ... .....++.++.+++.+||+.||++|||++|+
T Consensus 210 ~~~--~~~~~~~~~~~~~----~~~------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~ 259 (284)
T 3kk8_A 210 EDQ--HRLYAQIKAGAYD----YPS------------------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQA 259 (284)
T ss_dssp SSH--HHHHHHHHHTCCC----CCT------------------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred Cch--hHHHHHHHhcccc----CCc------------------------hhhcccCHHHHHHHHHHcccChhhCCCHHHH
Confidence 311 1111111110000 000 0111234568899999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 260 l~h 262 (284)
T 3kk8_A 260 LKV 262 (284)
T ss_dssp TTS
T ss_pred hcC
Confidence 874
No 183
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.1e-34 Score=268.54 Aligned_cols=192 Identities=19% Similarity=0.228 Sum_probs=151.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 63 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~ 130 (277)
T 3f3z_A 63 LDHPNIIRLYETFED-----NTDIYLVMELCTGGELFERVVHK----RVFRESDAARIMKDVLSAVAYCH---KLNVAHR 130 (277)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCEeeEEEEEec-----CCeEEEEEeccCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCC
Confidence 479999999998543 56789999999999999988654 45899999999999999999999 8999999
Q ss_pred cccCCceee---CCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLL---DGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll---~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||++ +.++.+||+|||.+...... ..+|+.|+|||++.+. ++.++||||+||++|||++|+.||..
T Consensus 131 dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (277)
T 3f3z_A 131 DLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSA 209 (277)
T ss_dssp CCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCC
Confidence 999999999 78899999999999865432 3788999999998654 89999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+...... . +......++.++.+++.+||+.||++|||+.|+
T Consensus 210 ~~~--~~~~~~~~~~~~~-----------~-----------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~ 259 (277)
T 3f3z_A 210 PTD--SEVMLKIREGTFT-----------F-----------------PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQA 259 (277)
T ss_dssp SSH--HHHHHHHHHCCCC-----------C-----------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCH--HHHHHHHHhCCCC-----------C-----------------CchhhhcCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 321 1111111110000 0 000011245678999999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 260 l~h 262 (277)
T 3f3z_A 260 LEH 262 (277)
T ss_dssp TTS
T ss_pred hcC
Confidence 863
No 184
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.2e-34 Score=269.14 Aligned_cols=189 Identities=20% Similarity=0.287 Sum_probs=153.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 71 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 138 (284)
T 2vgo_A 71 LRHPNILRMYNYFHD-----RKRIYLMLEFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYCH---ERKVIHR 138 (284)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECC
T ss_pred CCCCCEeeEEEEEEc-----CCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 469999999998543 56789999999999999988654 35899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||++.+..++.++|||||||++|||++|..||.....
T Consensus 139 dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~- 217 (284)
T 2vgo_A 139 DIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH- 217 (284)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-
T ss_pred CCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-
Confidence 99999999999999999999999765432 3788999999999999999999999999999999999999975311
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
.......... + . . .+...+.++.+++.+||+.||++|||++|++++
T Consensus 218 ----~~~~~~~~~~------~--~----------------~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 218 ----TETHRRIVNV------D--L----------------K-----FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ----HHHHHHHHTT------C--C----------------C-----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ----hHHHHHHhcc------c--c----------------C-----CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 1111110000 0 0 0 111234568899999999999999999999874
No 185
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=275.12 Aligned_cols=215 Identities=19% Similarity=0.280 Sum_probs=151.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 59 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~ 126 (311)
T 4agu_A 59 LKHPNLVNLLEVFRR-----KRRLHLVFEYCDHTVLHELDRYQ----RGVPEHLVKSITWQTLQAVNFCH---KHNCIHR 126 (311)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCSEEHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCccchhheeec-----CCeEEEEEEeCCCchHHHHHhhh----cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCC
Confidence 469999999998644 56789999999999998887654 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 127 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 206 (311)
T 4agu_A 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK 206 (311)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999876432 278889999999876 66899999999999999999999999764
Q ss_pred cCCCccHHHHHHHhcc---cchhcccC-c-cccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 332 FTGNLTLHNFVKEALP---ERLAEIVD-P-VLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~---~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
.... ....+..... +....... . ............. ... .......+.++.+++.+||+.||++|||
T Consensus 207 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt 278 (311)
T 4agu_A 207 SDVD--QLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDM----EPL--ELKFPNISYPALGLLKGCLHMDPTERLT 278 (311)
T ss_dssp SHHH--HHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSC----CCH--HHHCTTCCHHHHHHHHHHCCSSTTTSCC
T ss_pred CHHH--HHHHHHHHhcccccccccccccccccccCcCCCcccc----chh--hhhcccccHHHHHHHHHHccCChhhcCC
Confidence 2211 1111111110 00000000 0 0000000000000 000 0001234566899999999999999999
Q ss_pred HHHHHHH
Q 042634 407 MEEVAAQ 413 (427)
Q Consensus 407 ~~ev~~~ 413 (427)
++|++++
T Consensus 279 ~~ell~h 285 (311)
T 4agu_A 279 CEQLLHH 285 (311)
T ss_dssp HHHHHTS
T ss_pred HHHHhcC
Confidence 9999853
No 186
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.6e-35 Score=281.61 Aligned_cols=223 Identities=19% Similarity=0.195 Sum_probs=154.8
Q ss_pred cccccchhhhccccccCC---------------------------------CCCCccceeeeeecCCCcccccccchhhh
Q 042634 179 IRHRNLVKIITSCASVDF---------------------------------QGNDSEALVYEFMVNGSLEEWLHPNREAL 225 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~---------------------------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~ 225 (427)
++||||+++++++..... ..+...++||||++ |+|.+.+.......
T Consensus 57 l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~ 135 (383)
T 3eb0_A 57 LDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSG 135 (383)
T ss_dssp CCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTT
T ss_pred cCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcC
Confidence 579999999988643211 22345789999996 68887776543333
Q ss_pred hccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeC-CCCceEecccccccccCCc-----CCCccccccccc
Q 042634 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLD-GELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEY 299 (427)
Q Consensus 226 ~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~-~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~ 299 (427)
..+++..++.++.|++.||+||| +.||+||||||+||+++ .++.+||+|||+|+..... ..+|..|+|||+
T Consensus 136 ~~l~~~~~~~i~~qi~~aL~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~ 212 (383)
T 3eb0_A 136 RSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPEL 212 (383)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHH
Confidence 56999999999999999999999 89999999999999997 6889999999999865432 267889999999
Q ss_pred cCCC-CcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhccc--Cccccccccccchhhhcccccc
Q 042634 300 GMGS-EVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIV--DPVLLVEREEGETSKANAHKQF 376 (427)
Q Consensus 300 ~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 376 (427)
+.+. .++.++||||+||++|||++|+.||.+... ...+...+.....+....+. ++..... ..+ ......+
T Consensus 213 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~~--~~~---~~~~~~~ 286 (383)
T 3eb0_A 213 MLGATEYTPSIDLWSIGCVFGELILGKPLFSGETS-IDQLVRIIQIMGTPTKEQMIRMNPHYTEV--RFP---TLKAKDW 286 (383)
T ss_dssp HTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCTTC--C--CCC---CCCCCCH
T ss_pred hcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhCcccccc--cCC---ccCcccH
Confidence 8775 489999999999999999999999976321 11222222221111111000 0000000 000 0000000
Q ss_pred ccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 377 TRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 377 ~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
....+..++.++.+++.+||+.||++|||+.|+++
T Consensus 287 -~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 287 -RKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp -HHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -HhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00112234567899999999999999999999985
No 187
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1e-34 Score=282.32 Aligned_cols=224 Identities=19% Similarity=0.189 Sum_probs=152.6
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++++..... .+....++||||+++ ++.+.+.........+++..++.++.|++.||+||| +.||+|
T Consensus 89 l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH 164 (394)
T 4e7w_A 89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICH 164 (394)
T ss_dssp CCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred CCCCCcceEEEEEEecCCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccC
Confidence 579999999998754321 223346899999965 444443322222356899999999999999999999 899999
Q ss_pred ccccCCceeeC-CCCceEecccccccccCCc-----CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 258 CDLKPSNVLLD-GELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 258 rDlkp~NIll~-~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||||+|||++ .++.+||+|||+|+..... ..+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+
T Consensus 165 rDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 244 (394)
T 4e7w_A 165 RDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPG 244 (394)
T ss_dssp SCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999998 7899999999999875332 2778899999998764 589999999999999999999999976
Q ss_pred ccCCCccHHHHHHHhcccchhcc--cCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEI--VDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
... ...+...+.....+....+ .++..... ... ......+.. ......+.++.+++.+||+.||++|||+.
T Consensus 245 ~~~-~~~l~~i~~~~g~p~~~~~~~~~~~~~~~--~~~---~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 317 (394)
T 4e7w_A 245 ESG-IDQLVEIIKVLGTPSREQIKTMNPNYMEH--KFP---QIRPHPFSK-VFRPRTPPDAIDLISRLLEYTPSARLTAI 317 (394)
T ss_dssp SSH-HHHHHHHHHHHCCCCHHHHHHHCGGGSSS--CCC---CCCCCCHHH-HSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred CCH-HHHHHHHHHHhCCCCHHHHHhhChhhhhh--ccc---cccCCcHHH-hccccCCHHHHHHHHHHhCCChhhCCCHH
Confidence 421 1122222221111110000 00000000 000 000000000 01122456789999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|++++
T Consensus 318 e~l~h 322 (394)
T 4e7w_A 318 EALCH 322 (394)
T ss_dssp HHHTS
T ss_pred HHhcC
Confidence 99864
No 188
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=274.98 Aligned_cols=200 Identities=21% Similarity=0.237 Sum_probs=142.5
Q ss_pred ccccchhhhccccccC---CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCC--
Q 042634 180 RHRNLVKIITSCASVD---FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETP-- 254 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~---~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~-- 254 (427)
+||||+++++.+.... .......++||||+ +|+|.+++..... ...+++..++.++.|++.||+||| +.|
T Consensus 84 ~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~-~g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ 158 (337)
T 3ll6_A 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMH---RQKPP 158 (337)
T ss_dssp TSTTBCCEEEEEEECTTTSTTSSEEEEEEEECC-SEEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHH---TSSSC
T ss_pred cCCChhhccccccccccccccCCceEEEEEEec-CCCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCCC
Confidence 5999999998863211 13344578999999 5899888864321 145999999999999999999999 888
Q ss_pred eeeccccCCceeeCCCCceEecccccccccCCc------------------CCCcccccccccc---CCCCcCccccchh
Q 042634 255 IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA------------------TNNFFNFQIAEYG---MGSEVSTSGDVYS 313 (427)
Q Consensus 255 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~------------------~~~~~~y~aPE~~---~~~~~~~~~DiwS 313 (427)
|+||||||+||+++.++.+||+|||+++..... ..++..|+|||++ .+..++.++||||
T Consensus 159 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~s 238 (337)
T 3ll6_A 159 IIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWA 238 (337)
T ss_dssp CBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHH
T ss_pred EEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHH
Confidence 999999999999999999999999999876432 2478899999998 5667899999999
Q ss_pred HHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHH
Q 042634 314 FGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIG 393 (427)
Q Consensus 314 ~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 393 (427)
|||++|||++|+.||...... .......... ....++..+.+++
T Consensus 239 lG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~-------------------------------~~~~~~~~~~~li 282 (337)
T 3ll6_A 239 LGCILYLLCFRQHPFEDGAKL-----RIVNGKYSIP-------------------------------PHDTQYTVFHSLI 282 (337)
T ss_dssp HHHHHHHHHHSSCCC-----------------CCCC-------------------------------TTCCSSGGGHHHH
T ss_pred HHHHHHHHHhCCCCCcchhHH-----HhhcCcccCC-------------------------------cccccchHHHHHH
Confidence 999999999999999653111 0000000000 0011123467899
Q ss_pred hhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 042634 394 VTCSSELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 394 ~~cl~~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
.+||+.||++|||++|+++.|+++...
T Consensus 283 ~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 283 RAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp HHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999765
No 189
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.9e-34 Score=283.75 Aligned_cols=143 Identities=21% Similarity=0.305 Sum_probs=121.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+....+......++||||+ +|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 82 l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----~~l~~~~~~~i~~qil~aL~~LH---~~givHr 153 (432)
T 3n9x_A 82 LKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFKTP----IFLTEEHIKTILYNLLLGENFIH---ESGIIHR 153 (432)
T ss_dssp CCCTTBCCEEEECCCSCTTTCCCEEEEEECC-SEEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred cCCCCcceEEEEEecCCCCcCCeEEEEEecC-CcCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCC
Confidence 4699999999987664444446789999999 56999988654 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC----------------------------cCCCcccccccccc-CCCCcCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE----------------------------ATNNFFNFQIAEYG-MGSEVSTSG 309 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~----------------------------~~~~~~~y~aPE~~-~~~~~~~~~ 309 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|+|||++ ....++.++
T Consensus 154 Dlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~ 233 (432)
T 3n9x_A 154 DLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSI 233 (432)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHH
T ss_pred CCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCccc
Confidence 9999999999999999999999987532 22678999999986 556799999
Q ss_pred cchhHHHHHHHHHhCCCCCC
Q 042634 310 DVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 310 DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||++|||++|..||.
T Consensus 234 DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 234 DIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp HHHHHHHHHHHHHTTCTTTC
T ss_pred ccchHHHHHHHHHhcccccc
Confidence 99999999999998665554
No 190
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.1e-34 Score=299.67 Aligned_cols=188 Identities=20% Similarity=0.238 Sum_probs=152.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||+|+++++.+ ......++||||+++|+|.+++... ..+++..++.++.||+.||+||| +.||+||
T Consensus 399 ~~~~~i~~l~~~~-----~~~~~~~lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHr 466 (674)
T 3pfq_A 399 GKPPFLTQLHSCF-----QTMDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYR 466 (674)
T ss_dssp TCCTTBCCEEEEC-----BCSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTSEECC
T ss_pred cCCCeEEEEEEEE-----EeCCEEEEEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEec
Confidence 4799999999884 3466789999999999999998754 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+|||++.++.+||+|||+|+.... ...||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 467 DLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~ 546 (674)
T 3pfq_A 467 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546 (674)
T ss_dssp CCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999999986322 2278999999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH-----
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM----- 407 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~----- 407 (427)
. .+......... .. .+...+.++.+++.+||+.||++||++
T Consensus 547 ~-----~~~~~~i~~~~--------~~---------------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~ 592 (674)
T 3pfq_A 547 E-----DELFQSIMEHN--------VA---------------------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGE 592 (674)
T ss_dssp H-----HHHHHHHHSSC--------CC---------------------CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHH
T ss_pred H-----HHHHHHHHhCC--------CC---------------------CCccCCHHHHHHHHHHccCCHHHCCCCCCCcH
Confidence 1 11111111100 00 112234568999999999999999998
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
+||++
T Consensus 593 ~ei~~ 597 (674)
T 3pfq_A 593 RDIKE 597 (674)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 66654
No 191
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-35 Score=278.32 Aligned_cols=188 Identities=23% Similarity=0.356 Sum_probs=144.3
Q ss_pred cccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccc
Q 042634 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDL 260 (427)
Q Consensus 181 Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDl 260 (427)
||||+++++++.. ....++|||+ .+++|.+++... ..+++.++..++.|++.||+||| +.||+||||
T Consensus 68 ~~~iv~~~~~~~~-----~~~~~lv~e~-~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDi 134 (343)
T 3dbq_A 68 SDKIIRLYDYEIT-----DQYIYMVMEC-GNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDL 134 (343)
T ss_dssp CTTBCCEEEEEEC-----SSEEEEEECC-CSEEHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCC
T ss_pred CCceEEEeeeEee-----CCEEEEEEeC-CCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 3999999998543 5678999995 588999998754 45899999999999999999999 899999999
Q ss_pred cCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCC-----------CCcCccccchhHHHHHHHH
Q 042634 261 KPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMG-----------SEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 261 kp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~-----------~~~~~~~DiwS~G~vl~el 321 (427)
||+|||++ ++.+||+|||+|+..... ..||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 135 kp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~el 213 (343)
T 3dbq_A 135 KPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 213 (343)
T ss_dssp CGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHH
T ss_pred CcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHH
Confidence 99999997 578999999999875332 268999999999864 6789999999999999999
Q ss_pred HhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 322 FTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 322 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
++|+.||...... ... .... +++..... .+...+.++.+++.+||+.||
T Consensus 214 l~g~~pf~~~~~~---~~~-~~~~--------~~~~~~~~-------------------~~~~~~~~l~~li~~~L~~dp 262 (343)
T 3dbq_A 214 TYGKTPFQQIINQ---ISK-LHAI--------IDPNHEIE-------------------FPDIPEKDLQDVLKCCLKRDP 262 (343)
T ss_dssp HHSSCTTTTCCSH---HHH-HHHH--------HCTTSCCC-------------------CCCCSCHHHHHHHHHHTCSST
T ss_pred HhCCCcchhhhhH---HHH-HHHH--------hcCCcccC-------------------CcccCCHHHHHHHHHHcCCCh
Confidence 9999999753211 111 1111 11000000 011123467899999999999
Q ss_pred CCCCCHHHHHHH
Q 042634 402 RERMNMEEVAAQ 413 (427)
Q Consensus 402 ~~Rpt~~ev~~~ 413 (427)
++|||++|++++
T Consensus 263 ~~Rpt~~e~l~h 274 (343)
T 3dbq_A 263 KQRISIPELLAH 274 (343)
T ss_dssp TTSCCHHHHHTS
T ss_pred hHCCCHHHHHhC
Confidence 999999999865
No 192
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-34 Score=278.39 Aligned_cols=193 Identities=20% Similarity=0.257 Sum_probs=151.5
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||||+++++.+.. ....++||||+++|+|.+++... ..+++..++.++.|++.||+||| +.||+|||
T Consensus 117 ~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~D 184 (355)
T 1vzo_A 117 QSPFLVTLHYAFQT-----ETKLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRD 184 (355)
T ss_dssp TCTTBCCEEEEEEE-----TTEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCC
T ss_pred CCCceeEEEEEEee-----CceEEEEeecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCC
Confidence 69999999988544 56789999999999999998654 45899999999999999999999 88999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCc-------CCCccccccccccCC--CCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEA-------TNNFFNFQIAEYGMG--SEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~~y~aPE~~~~--~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||+|||++.++.+||+|||+++..... ..||..|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 185 lkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 264 (355)
T 1vzo_A 185 IKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264 (355)
T ss_dssp CCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred CCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 9999999999999999999999865322 268999999999986 3478999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-----
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM----- 405 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp----- 405 (427)
..... ............. ...+..++..+.+++.+||+.||++||
T Consensus 265 ~~~~~-~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~ 314 (355)
T 1vzo_A 265 DGEKN-SQAEISRRILKSE-----------------------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPR 314 (355)
T ss_dssp TTSCC-CHHHHHHHHHHCC-----------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTT
T ss_pred CCccc-hHHHHHHHHhccC-----------------------------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCC
Confidence 32221 1222111111000 001122345688999999999999999
Q ss_pred CHHHHHHHH
Q 042634 406 NMEEVAAQL 414 (427)
Q Consensus 406 t~~ev~~~L 414 (427)
|++|+++..
T Consensus 315 s~~ell~h~ 323 (355)
T 1vzo_A 315 DADEIKEHL 323 (355)
T ss_dssp THHHHHTSG
T ss_pred CHHHHHcCc
Confidence 999998753
No 193
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.6e-34 Score=286.24 Aligned_cols=191 Identities=21% Similarity=0.256 Sum_probs=151.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++|||||.+|+|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 78 l~hpniv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~ 145 (486)
T 3mwu_A 78 LDHPNIMKLFEILED-----SSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMH---KHNIVHR 145 (486)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCcCeEEEEEEc-----CCEEEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEec
Confidence 479999999998543 56789999999999999888654 45899999999999999999999 8999999
Q ss_pred cccCCceeeC---CCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLD---GELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~---~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+|||++ .++.+||+|||+|+..... ..||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+
T Consensus 146 Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 224 (486)
T 3mwu_A 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG 224 (486)
T ss_dssp CCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999995 4568999999999866433 278999999999876 589999999999999999999999975
Q ss_pred ccCCCccHHHHHHHh-cccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 331 MFTGNLTLHNFVKEA-LPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
... ..+...+... .... .......+.++.+++.+||+.||++|||+.|
T Consensus 225 ~~~--~~~~~~i~~~~~~~~-----------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~ 273 (486)
T 3mwu_A 225 KNE--YDILKRVETGKYAFD-----------------------------LPQWRTISDDAKDLIRKMLTFHPSLRITATQ 273 (486)
T ss_dssp SSH--HHHHHHHHHTCCCSC-----------------------------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred CCH--HHHHHHHHhCCCCCC-----------------------------CcccCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 311 1111111110 0000 0011223556889999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
++++
T Consensus 274 ~l~h 277 (486)
T 3mwu_A 274 CLEH 277 (486)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 9874
No 194
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3e-34 Score=284.78 Aligned_cols=189 Identities=19% Similarity=0.276 Sum_probs=150.1
Q ss_pred CCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceee---CCCCceEe
Q 042634 199 NDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLL---DGELTAHV 275 (427)
Q Consensus 199 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll---~~~~~~kL 275 (427)
....++||||+ +++|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+|||+ +.++.+||
T Consensus 75 ~~~~~lvme~~-g~sL~~ll~~~~---~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL 147 (483)
T 3sv0_A 75 GDYNVLVMDLL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYI 147 (483)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEE
T ss_pred CCEEEEEEECC-CCCHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEE
Confidence 45679999999 999999986432 45999999999999999999999 8999999999999999 58899999
Q ss_pred cccccccccCC-------------cCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 042634 276 GDFGLAKFLPE-------------ATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFV 342 (427)
Q Consensus 276 ~DFG~a~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~ 342 (427)
+|||+|+.... ...||..|+|||++.+..++.++|||||||++|||++|+.||.+..... ..+..
T Consensus 148 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~--~~~~~ 225 (483)
T 3sv0_A 148 IDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT--KKQKY 225 (483)
T ss_dssp CCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS--HHHHH
T ss_pred EeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh--HHHHH
Confidence 99999986543 2368889999999999999999999999999999999999998653221 11111
Q ss_pred HHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 042634 343 KEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFRNK 420 (427)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~~~ 420 (427)
...........+.. ....++.++.+++.+||+.||++||++++|++.|+++...
T Consensus 226 ~~i~~~~~~~~~~~------------------------l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 226 EKISEKKVATSIEA------------------------LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HHHHHHHHHSCHHH------------------------HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhhccccccHHH------------------------HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 11111100000000 1122456799999999999999999999999999998764
No 195
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.3e-34 Score=278.85 Aligned_cols=223 Identities=16% Similarity=0.192 Sum_probs=143.1
Q ss_pred cccccchhhhcccccc-CCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASV-DFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~-~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++.+... .+......++|+||+ +++|.+++.. ..+++..+..++.||+.||+||| +.||+|
T Consensus 85 l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givH 155 (367)
T 2fst_X 85 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIH---SADIIH 155 (367)
T ss_dssp CCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred CCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeee
Confidence 4699999999986542 122235679999999 8899998864 34899999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc---CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+||+++.++.+||+|||+|+..... ..+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+...
T Consensus 156 ~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 235 (367)
T 2fst_X 156 RDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235 (367)
T ss_dssp CCCCGGGEEECTTCCEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999999999999999999999876443 378899999999887 6789999999999999999999999976321
Q ss_pred CCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 334 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
...+.........+ ..+.+...... ........................+..+.+++.+||+.||++|||++|++++
T Consensus 236 -~~~l~~i~~~~g~p-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 236 -IDQLKLILRLVGTP-GAELLKKISSE-SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp -HHHHHHHHHHHCSC-CHHHHTTCCCH-HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -HHHHHHHHHHhCCC-CHHHHHHhhhH-HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 11111111111111 00111100000 0000000000000000000011235668999999999999999999999864
No 196
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.3e-34 Score=277.07 Aligned_cols=219 Identities=19% Similarity=0.198 Sum_probs=155.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+...........++||||+. |+|.+++.. ..+++..+..++.|++.||+||| +.||+||
T Consensus 82 l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 152 (364)
T 3qyz_A 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIH---SANVLHR 152 (364)
T ss_dssp CCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred cCCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 46999999999876654455567899999995 689888854 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc---------CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
||||+||+++.++.+||+|||.++..... ..||+.|+|||++.+ ..++.++||||+||++|||++|+.||
T Consensus 153 Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 232 (364)
T 3qyz_A 153 DLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232 (364)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999866432 278899999998654 45899999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhccc---chhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 329 NEMFTGNLTLHNFVKEALPE---RLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
.+.... ..+.........+ .+....+..... ....................+.++.+++.+||+.||++||
T Consensus 233 ~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 306 (364)
T 3qyz_A 233 PGKHYL-DQLNHILGILGSPSQEDLNCIINLKARN-----YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306 (364)
T ss_dssp CCSSGG-GHHHHHHHHHCSCCHHHHHTCCCHHHHH-----HHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred CCCChH-HHHHHHHHHhCCCCHHHHHHhhhhhHHH-----HHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCC
Confidence 764211 1122222111111 011111000000 0000000000000001122356789999999999999999
Q ss_pred CHHHHHH
Q 042634 406 NMEEVAA 412 (427)
Q Consensus 406 t~~ev~~ 412 (427)
|++|+++
T Consensus 307 t~~e~l~ 313 (364)
T 3qyz_A 307 EVEQALA 313 (364)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999986
No 197
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.6e-34 Score=288.61 Aligned_cols=191 Identities=23% Similarity=0.283 Sum_probs=153.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++||||+.+|+|.+++... ..+++..+..++.|++.||+||| ++||+||
T Consensus 83 l~hpniv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 150 (484)
T 3nyv_A 83 LDHPNIMKLYEFFED-----KGYFYLVGEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYMH---KNKIVHR 150 (484)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHHTC----SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCCCCCCcEEEEEEe-----CCEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeC
Confidence 479999999998543 56789999999999999988655 45899999999999999999999 8999999
Q ss_pred cccCCceee---CCCCceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLL---DGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll---~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+|||+ +.++.+||+|||+|+...... .||+.|+|||++.+ .++.++||||+||++|+|++|..||.+
T Consensus 151 Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 229 (484)
T 3nyv_A 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 229 (484)
T ss_dssp CCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC
Confidence 999999999 567899999999998765433 78999999999876 689999999999999999999999975
Q ss_pred ccCCCccHHHHHHHh-cccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 331 MFTGNLTLHNFVKEA-LPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
... ......+... .... .......+.++.+++.+||+.||++|||++|
T Consensus 230 ~~~--~~~~~~i~~~~~~~~-----------------------------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e 278 (484)
T 3nyv_A 230 ANE--YDILKKVEKGKYTFE-----------------------------LPQWKKVSESAKDLIRKMLTYVPSMRISARD 278 (484)
T ss_dssp SSH--HHHHHHHHHCCCCCC-----------------------------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCH--HHHHHHHHcCCCCCC-----------------------------CcccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence 311 1111111110 0000 0011224566889999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
++++
T Consensus 279 ~l~h 282 (484)
T 3nyv_A 279 ALDH 282 (484)
T ss_dssp HHTS
T ss_pred HhhC
Confidence 9863
No 198
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.6e-34 Score=275.67 Aligned_cols=192 Identities=22% Similarity=0.322 Sum_probs=151.6
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.||+.||+||| +.||+|||
T Consensus 158 ~hp~iv~~~~~~~~-----~~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~D 225 (365)
T 2y7j_A 158 GHPHIITLIDSYES-----SSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLH---ANNIVHRD 225 (365)
T ss_dssp TCTTBCCEEEEEEB-----SSEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSC
T ss_pred CCCCEeEEEEEEee-----CCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence 79999999988543 56789999999999999998643 45899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCC------CCcCccccchhHHHHHHHHHhCCCCC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMG------SEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~------~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
|||+||+++.++.+||+|||++...... ..||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 226 lkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf 305 (365)
T 2y7j_A 226 LKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305 (365)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred CCHHHEEECCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCC
Confidence 9999999999999999999999876433 278999999999853 35889999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.... .......+...... ... .....++.++.+++.+||+.||++|||++
T Consensus 306 ~~~~--~~~~~~~i~~~~~~----~~~------------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 355 (365)
T 2y7j_A 306 WHRR--QILMLRMIMEGQYQ----FSS------------------------PEWDDRSSTVKDLISRLLQVDPEARLTAE 355 (365)
T ss_dssp CCSS--HHHHHHHHHHTCCC----CCH------------------------HHHSSSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCC--HHHHHHHHHhCCCC----CCC------------------------cccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 6531 11111111110000 000 00112345689999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|+++.
T Consensus 356 ell~h 360 (365)
T 2y7j_A 356 QALQH 360 (365)
T ss_dssp HHHHS
T ss_pred HHhcC
Confidence 99863
No 199
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=7.9e-34 Score=268.93 Aligned_cols=220 Identities=19% Similarity=0.226 Sum_probs=156.9
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
.||||+++++.+...........++||||+. |+|.+++..... ..+++..+..++.|++.||+||| +.||+|||
T Consensus 72 ~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~d 145 (326)
T 1blx_A 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRD 145 (326)
T ss_dssp CCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCC
T ss_pred CCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecc
Confidence 7999999999875332334567899999996 799998865432 34899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTG 334 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~ 334 (427)
|||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 146 lkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 225 (326)
T 1blx_A 146 LKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225 (326)
T ss_dssp CCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred CCHHHeEEcCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence 9999999999999999999999876432 37788999999999999999999999999999999999999753211
Q ss_pred CccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 335 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
..+................. ...... .................++..+.+++.+||+.||++|||++|+++
T Consensus 226 -~~~~~i~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 226 -DQLGKILDVIGLPGEEDWPR-DVALPR-----QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp -HHHHHHHHHHCCCCGGGSCT-TCSSCG-----GGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHHHHHHHHcCCCCcccCcc-ccccch-----hhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11111111111000000000 000000 000000000000011234567889999999999999999999985
No 200
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.4e-34 Score=278.03 Aligned_cols=221 Identities=19% Similarity=0.234 Sum_probs=154.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC-Ceee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET-PIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~-~ivH 257 (427)
++||||+++++.+.. +...++||||+++++|.+++... ..+++..+..++.|++.||+||| +. ||+|
T Consensus 88 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H 155 (360)
T 3eqc_A 88 CNSPYIVGFYGAFYS-----DGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLR---EKHKIMH 155 (360)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCC
T ss_pred CCCCCEEEEeEEEEE-----CCEEEEEEECCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEc
Confidence 469999999998654 56789999999999999998654 35899999999999999999999 64 9999
Q ss_pred ccccCCceeeCCCCceEecccccccccC----CcCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLP----EATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+||+++.++.+||+|||+++... ....|+..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 235 (360)
T 3eqc_A 156 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 235 (360)
T ss_dssp SCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCH
T ss_pred CCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 9999999999999999999999997542 233789999999999999999999999999999999999999975321
Q ss_pred CCccHHHHHHHhcc-------cchh---cccCccccccccccc--hhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 334 GNLTLHNFVKEALP-------ERLA---EIVDPVLLVEREEGE--TSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 334 ~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
.. .......... .... ............... ..................++.++.+++.+||+.||
T Consensus 236 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 313 (360)
T 3eqc_A 236 KE--LELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNP 313 (360)
T ss_dssp HH--HHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSST
T ss_pred HH--HHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcCh
Confidence 11 1111000000 0000 000000000000000 00000000001111222345679999999999999
Q ss_pred CCCCCHHHHHHH
Q 042634 402 RERMNMEEVAAQ 413 (427)
Q Consensus 402 ~~Rpt~~ev~~~ 413 (427)
++|||++|++++
T Consensus 314 ~~Rpt~~ell~h 325 (360)
T 3eqc_A 314 AERADLKQLMVH 325 (360)
T ss_dssp TTSCCHHHHHTS
T ss_pred hhCCCHHHHhhC
Confidence 999999999874
No 201
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.3e-34 Score=271.26 Aligned_cols=192 Identities=25% Similarity=0.303 Sum_probs=151.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ...++||||+++++|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 72 l~h~~i~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 138 (322)
T 2ycf_A 72 LNHPCIIKIKNFFDA------EDYYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLH---ENGIIHR 138 (322)
T ss_dssp CCCTTBCCEEEEEES------SSEEEEEECCTTEETHHHHSTT----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCceEeeEEcC------CceEEEEecCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 479999999987532 3479999999999999988754 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCC---ceEecccccccccCCcC-----CCccccccccccC---CCCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGEL---TAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~---~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++ .+||+|||+++...... .|+..|+|||++. ...++.++|||||||++|||++|..|
T Consensus 139 dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 218 (322)
T 2ycf_A 139 DLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218 (322)
T ss_dssp CCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCS
T ss_pred CCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999998765 49999999998765432 6889999999973 56789999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|....... .+...+......... .....++.++.+++.+||+.||++|||+
T Consensus 219 f~~~~~~~-~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~li~~~l~~dP~~Rps~ 269 (322)
T 2ycf_A 219 FSEHRTQV-SLKDQITSGKYNFIP----------------------------EVWAEVSEKALDLVKKLLVVDPKARFTT 269 (322)
T ss_dssp SCSTTCSS-CHHHHHHHTCCCCCH----------------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred CcccchHH-HHHHHHHhCccccCc----------------------------hhhhhcCHHHHHHHHHHcccCHhhCCCH
Confidence 97542221 222222111100000 0112235678999999999999999999
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
+|+++
T Consensus 270 ~~~l~ 274 (322)
T 2ycf_A 270 EEALR 274 (322)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 99985
No 202
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.9e-34 Score=265.54 Aligned_cols=193 Identities=19% Similarity=0.263 Sum_probs=152.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 65 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 132 (283)
T 3bhy_A 65 IRHPNIITLHDIFEN-----KTDVVLILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVHYLH---SKRIAHF 132 (283)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCeeehhheecC-----CCeEEEEEeecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCC
Confidence 469999999998543 56789999999999999998643 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCC----ceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDGEL----TAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~~~----~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++.++ .+||+|||.++..... ..++..|+|||++.+..++.++||||||+++|||++|..||.
T Consensus 133 dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 212 (283)
T 3bhy_A 133 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 212 (283)
T ss_dssp CCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred CCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCC
Confidence 9999999998876 8999999999876432 268889999999999999999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.... ........... .. . ........+..+.+++.+||+.||++|||++|
T Consensus 213 ~~~~-----~~~~~~~~~~~----~~--~-------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 262 (283)
T 3bhy_A 213 GETK-----QETLTNISAVN----YD--F-------------------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQ 262 (283)
T ss_dssp CSSH-----HHHHHHHHTTC----CC--C-------------------CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred Ccch-----HHHHHHhHhcc----cC--C-------------------cchhcccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence 5311 11111100000 00 0 00011223556899999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
++++
T Consensus 263 ~l~h 266 (283)
T 3bhy_A 263 SLEH 266 (283)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9973
No 203
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.1e-34 Score=274.32 Aligned_cols=210 Identities=20% Similarity=0.258 Sum_probs=154.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccc------cccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEW------LHPNREALKNLNLLQRLSIAVDVASALDYLHHYCE 252 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~ 252 (427)
++||||+++++.+.. ....++||||+++|+|.++ +..... ..+++..++.++.|++.||+||| +
T Consensus 100 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~ 169 (348)
T 2pml_X 100 IKNEYCLTCEGIITN-----YDEVYIIYEYMENDSILKFDEYFFVLDKNYT--CFIPIQVIKCIIKSVLNSFSYIH---N 169 (348)
T ss_dssp CCCTTBCCCSEEEES-----SSEEEEEEECCTTCBSSEESSSEESSCSSSC--CCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred CCCCCcceEEEEEee-----CCeEEEEEeccCCCcHHHHHHHhhhhhhccc--cCCCHHHHHHHHHHHHHHHHHHh---c
Confidence 469999999998644 5678999999999999999 554212 56999999999999999999999 7
Q ss_pred -CCeeeccccCCceeeCCCCceEecccccccccCC----cCCCccccccccccCCC-CcCc-cccchhHHHHHHHHHhCC
Q 042634 253 -TPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE----ATNNFFNFQIAEYGMGS-EVST-SGDVYSFGILLLETFTGK 325 (427)
Q Consensus 253 -~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~y~aPE~~~~~-~~~~-~~DiwS~G~vl~ell~g~ 325 (427)
.||+||||||+||+++.++.+||+|||.++.... ...++..|+|||++.+. .++. ++|||||||++|||++|+
T Consensus 170 ~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~ 249 (348)
T 2pml_X 170 EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249 (348)
T ss_dssp TSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSS
T ss_pred cCCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999987543 23788999999999887 6666 999999999999999999
Q ss_pred CCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC
Q 042634 326 RPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM 405 (427)
Q Consensus 326 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp 405 (427)
.||....... .....+..... ............ ............++.++.+++.+||+.||++||
T Consensus 250 ~pf~~~~~~~-~~~~~i~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 315 (348)
T 2pml_X 250 VPFSLKISLV-ELFNNIRTKNI-EYPLDRNHFLYP------------LTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315 (348)
T ss_dssp CSSCCSSCSH-HHHHHHTSCCC-CCCCSSSSSTTT------------TCC--------CCCHHHHHHHHHHCCSSGGGSC
T ss_pred CCCCCCCcHH-HHHHHHhccCc-CCccchhhhhcc------------ccccccccchhhcCHHHHHHHHHHccCChhhCC
Confidence 9997542211 11111111000 000000000000 000000011133456789999999999999999
Q ss_pred CHHHHHH
Q 042634 406 NMEEVAA 412 (427)
Q Consensus 406 t~~ev~~ 412 (427)
|++|+++
T Consensus 316 s~~e~l~ 322 (348)
T 2pml_X 316 TSEDALK 322 (348)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999986
No 204
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.5e-34 Score=274.55 Aligned_cols=217 Identities=18% Similarity=0.191 Sum_probs=148.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||++ |+|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 90 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~ 156 (329)
T 3gbz_A 90 LQHRNIIELKSVIHH-----NHRLHLIFEYAE-NDLKKYMDKN----PDVSMRVIKSFLYQLINGVNFCH---SRRCLHR 156 (329)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCS-EEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred cCCCCcceEEEEEec-----CCEEEEEEecCC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCEECC
Confidence 469999999998644 567899999996 6999988655 34899999999999999999999 8999999
Q ss_pred cccCCceee-----CCCCceEecccccccccCCc------CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCC
Q 042634 259 DLKPSNVLL-----DGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKR 326 (427)
Q Consensus 259 Dlkp~NIll-----~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~ 326 (427)
||||+|||+ +.++.+||+|||+|+..... ..+|..|+|||++.+. .++.++|||||||++|||++|+.
T Consensus 157 Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 236 (329)
T 3gbz_A 157 DLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTP 236 (329)
T ss_dssp CCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 999999999 45566999999999865422 2678899999999874 48999999999999999999999
Q ss_pred CCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 327 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 327 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
||...... ..+........... ............+... .................+.++.+++.+||+.||++|||
T Consensus 237 pf~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 312 (329)
T 3gbz_A 237 LFPGDSEI-DQLFKIFEVLGLPD-DTTWPGVTALPDWKQS--FPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRIS 312 (329)
T ss_dssp SSCCSSHH-HHHHHHHHHHCCCC-TTTSTTGGGSTTCCTT--CCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCC
T ss_pred CcCCCCHH-HHHHHHHHHhCCCc-hhhhhhhhhhhhhhhh--hhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCC
Confidence 99753211 11111111111000 0000000000000000 00000000000011224567899999999999999999
Q ss_pred HHHHHH
Q 042634 407 MEEVAA 412 (427)
Q Consensus 407 ~~ev~~ 412 (427)
++|+++
T Consensus 313 ~~e~l~ 318 (329)
T 3gbz_A 313 AKNALE 318 (329)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 999986
No 205
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.1e-34 Score=268.36 Aligned_cols=193 Identities=25% Similarity=0.273 Sum_probs=154.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 63 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 130 (304)
T 2jam_A 63 IKHENIVTLEDIYES-----TTHYYLVMQLVSGGELFDRILER----GVYTEKDASLVIQQVLSAVKYLH---ENGIVHR 130 (304)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCeeehhhhccc-----CCEEEEEEEcCCCccHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 469999999998543 56789999999999999988643 45899999999999999999999 8999999
Q ss_pred cccCCceee---CCCCceEecccccccccCCcC----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLL---DGELTAHVGDFGLAKFLPEAT----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll---~~~~~~kL~DFG~a~~~~~~~----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||++ +.++.+||+|||.++...... .++..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 131 dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 210 (304)
T 2jam_A 131 DLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210 (304)
T ss_dssp SCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 999999999 788999999999998765433 5888999999999999999999999999999999999999753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. ......+...... .. .......+.++.+++.+||+.||++|||++|++
T Consensus 211 ~~--~~~~~~i~~~~~~----~~------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l 260 (304)
T 2jam_A 211 TE--SKLFEKIKEGYYE----FE------------------------SPFWDDISESAKDFICHLLEKDPNERYTCEKAL 260 (304)
T ss_dssp CH--HHHHHHHHHCCCC----CC------------------------TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred CH--HHHHHHHHcCCCC----CC------------------------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 11 1111111110000 00 001122356689999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
+.
T Consensus 261 ~h 262 (304)
T 2jam_A 261 SH 262 (304)
T ss_dssp TS
T ss_pred cC
Confidence 63
No 206
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.4e-34 Score=275.33 Aligned_cols=189 Identities=22% Similarity=0.228 Sum_probs=153.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. +...++||||+++++|.+++... ..+++.+++.++.|++.||+||| +.||+||
T Consensus 98 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 165 (335)
T 2owb_A 98 LAHQHVVGFHGFFED-----NDFVFVVLELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLH---RNRVIHR 165 (335)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCCCeEEEEEec-----CCeEEEEEecCCCCCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCEec
Confidence 579999999998543 56789999999999999987643 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||+++..... ..++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 166 dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 245 (335)
T 2owb_A 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 245 (335)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred CCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC
Confidence 99999999999999999999999865422 268889999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ........... .. .+..++.++.+++.+||+.||++|||++|+++
T Consensus 246 ~-----~~~~~~~~~~~----~~-------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 246 L-----KETYLRIKKNE----YS-------------------------IPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp H-----HHHHHHHHHTC----CC-------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred H-----HHHHHHHhcCC----CC-------------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 11111100000 00 11123456789999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 292 ~ 292 (335)
T 2owb_A 292 D 292 (335)
T ss_dssp S
T ss_pred C
Confidence 4
No 207
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7.4e-34 Score=274.17 Aligned_cols=224 Identities=17% Similarity=0.173 Sum_probs=148.3
Q ss_pred cccccchhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++++.... +......++||||++ |+|.+++. ..+++..+..++.|++.||+||| +.||+|
T Consensus 81 l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH---~~~ivH 150 (371)
T 2xrw_A 81 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH---SAGIIH 150 (371)
T ss_dssp CCCTTBCCEEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred cCCCCccceEEeeccccccccccceEEEEEcCC-CCHHHHHh------hccCHHHHHHHHHHHHHHHHHHH---HCCeec
Confidence 57999999999865422 122346799999995 57877764 23889999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
|||||+||+++.++.+||+|||+|+..... ..||..|+|||++.+..++.++||||+||++|||++|+.||.+..
T Consensus 151 ~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 230 (371)
T 2xrw_A 151 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230 (371)
T ss_dssp SCCCGGGEEECTTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccCCHHHEEEcCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999999876443 378899999999999999999999999999999999999997632
Q ss_pred CCCccHHHHHHHhcc--cchhcccCccccccccccc------hhhh-ccccccccccchHHHHHHHHHHHhhcCCCCCCC
Q 042634 333 TGNLTLHNFVKEALP--ERLAEIVDPVLLVEREEGE------TSKA-NAHKQFTRSFSVKECLVSVLGIGVTCSSELPRE 403 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~ 403 (427)
.. ..+......... +.....+.+.......... .... ...............+.++.+++.+||+.||++
T Consensus 231 ~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 309 (371)
T 2xrw_A 231 HI-DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 309 (371)
T ss_dssp HH-HHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGG
T ss_pred HH-HHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhh
Confidence 11 111111110000 0000000000000000000 0000 000000011123445778999999999999999
Q ss_pred CCCHHHHHHH
Q 042634 404 RMNMEEVAAQ 413 (427)
Q Consensus 404 Rpt~~ev~~~ 413 (427)
|||++|++++
T Consensus 310 R~t~~e~l~h 319 (371)
T 2xrw_A 310 RISVDEALQH 319 (371)
T ss_dssp SCCHHHHHHS
T ss_pred CCCHHHHhCC
Confidence 9999999874
No 208
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.3e-34 Score=266.12 Aligned_cols=189 Identities=23% Similarity=0.389 Sum_probs=146.9
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 68 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 135 (276)
T 2h6d_A 68 FRHPHIIKLYQVIST-----PTDFFMVMEYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCH---RHMVVHR 135 (276)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCC
T ss_pred CCCCCEeEEEEEEec-----CCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccC
Confidence 469999999998543 56789999999999999998654 35899999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||.+.+..+ +.++||||||+++|||++|+.||....
T Consensus 136 dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 215 (276)
T 2h6d_A 136 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215 (276)
T ss_dssp CCCGGGEEECTTSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCChhhEEECCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 99999999999999999999999876543 267889999999988765 689999999999999999999996531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ....+.+..... ..+..++.++.+++.+||+.||++|||++|+++
T Consensus 216 ~--~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 216 V--PTLFKKIRGGVF--------------------------------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp H--HHHHHHHHHCCC--------------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred H--HHHHHHhhcCcc--------------------------------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1 111111111000 011123456889999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 262 h 262 (276)
T 2h6d_A 262 H 262 (276)
T ss_dssp S
T ss_pred C
Confidence 4
No 209
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.2e-34 Score=286.21 Aligned_cols=192 Identities=21% Similarity=0.252 Sum_probs=151.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++|||||++|+|.+++... ..+++..+..++.||+.||+||| +.||+||
T Consensus 93 l~hpniv~~~~~~~~-----~~~~~lv~e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 160 (494)
T 3lij_A 93 LDHPNIMKLYDFFED-----KRNYYLVMECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHR 160 (494)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCCCeEEEEEEe-----CCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence 579999999998643 56789999999999999888644 45899999999999999999999 8999999
Q ss_pred cccCCceeeCC---CCceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDG---ELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~---~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+|||++. ++.+||+|||+|+..... ..||+.|+|||++. ..++.++||||+||++|+|++|..||.+
T Consensus 161 Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~ 239 (494)
T 3lij_A 161 DLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG 239 (494)
T ss_dssp CCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999976 456999999999876433 26899999999976 5699999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ..+...+...... ... ......+.++.+++.+||+.||++|||++|+
T Consensus 240 ~~~--~~~~~~i~~~~~~----~~~------------------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~ 289 (494)
T 3lij_A 240 QTD--QEILRKVEKGKYT----FDS------------------------PEWKNVSEGAKDLIKQMLQFDSQRRISAQQA 289 (494)
T ss_dssp SSH--HHHHHHHHHTCCC----CCS------------------------GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCH--HHHHHHHHhCCCC----CCc------------------------hhcccCCHHHHHHHHHHCCCChhhCccHHHH
Confidence 321 1111111110000 000 0112234568899999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 290 l~h 292 (494)
T 3lij_A 290 LEH 292 (494)
T ss_dssp HTC
T ss_pred hcC
Confidence 864
No 210
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.2e-34 Score=282.31 Aligned_cols=223 Identities=20% Similarity=0.196 Sum_probs=152.8
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++|||||++++++..... .+....++||||++ +++.+.+.........+++..++.++.||+.||+||| +.||+|
T Consensus 104 l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH 179 (420)
T 1j1b_A 104 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICH 179 (420)
T ss_dssp CCCTTBCCEEEEEEEEETTTTEEEEEEEEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEEC
T ss_pred cCCCCccceeeEEeccCCCCcceeEEeehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 579999999888644221 11233678999996 4666665543333356999999999999999999999 899999
Q ss_pred ccccCCceeeCCC-CceEecccccccccCCc-----CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 258 CDLKPSNVLLDGE-LTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 258 rDlkp~NIll~~~-~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
|||||+|||++.+ +.+||+|||+|+..... ..+|..|+|||++.+. .++.++|||||||++|||++|+.||.+
T Consensus 180 rDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~ 259 (420)
T 1j1b_A 180 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259 (420)
T ss_dssp SCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 9999999999965 67899999999875432 2788999999998764 789999999999999999999999976
Q ss_pred ccCCCccHHHHHHHhccc---chhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 331 MFTGNLTLHNFVKEALPE---RLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
... ...+.+.+.....+ .+... ++..... ... ......+.. ......+.++.+++.+||+.||++|||+
T Consensus 260 ~~~-~~~l~~i~~~lg~p~~~~~~~~-~~~~~~~--~~p---~~~~~~~~~-~~~~~~~~~~~~Li~~~L~~dP~~R~t~ 331 (420)
T 1j1b_A 260 DSG-VDQLVEIIKVLGTPTREQIREM-NPNYTEF--KFP---QIKAHPWTK-VFRPRTPPEAIALCSRLLEYTPTARLTP 331 (420)
T ss_dssp SSH-HHHHHHHHHHHCSCCHHHHHHH-CSCCCCC--CCC---CCCCCCHHH-HSCTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred CCH-HHHHHHHHHHhCCCCHHHHHhh-Chhhhhh--ccC---ccCCCCHHH-hcCCCCCHHHHHHHHHhccCChhHCCCH
Confidence 321 11222222221111 11111 0000000 000 000000000 0112235678999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
.|++++
T Consensus 332 ~e~l~h 337 (420)
T 1j1b_A 332 LEACAH 337 (420)
T ss_dssp HHHHTS
T ss_pred HHHhCC
Confidence 999863
No 211
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.9e-34 Score=269.30 Aligned_cols=189 Identities=22% Similarity=0.220 Sum_probs=153.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 72 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~ 139 (294)
T 2rku_A 72 LAHQHVVGFHGFFED-----NDFVFVVLELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLH---RNRVIHR 139 (294)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCEeeeeeeecc-----CCEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 479999999998543 56789999999999999987543 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+..++.++||||+|+++|||++|+.||....
T Consensus 140 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 219 (294)
T 2rku_A 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 219 (294)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred CCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999865422 268889999999999899999999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. .+........ .. ..+...+..+.+++.+||+.||++|||++|+++
T Consensus 220 ~-----~~~~~~~~~~--------~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 220 L-----KETYLRIKKN--------EY---------------------SIPKHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp H-----HHHHHHHHTT--------CC---------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred H-----HHHHHHHhhc--------cC---------------------CCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1 1111110000 00 011123456889999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 266 ~ 266 (294)
T 2rku_A 266 D 266 (294)
T ss_dssp S
T ss_pred C
Confidence 4
No 212
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.1e-34 Score=271.40 Aligned_cols=222 Identities=17% Similarity=0.193 Sum_probs=157.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..|++++++++.+.. ....++||||+ +++|.+++..... ..+++..+..++.|++.||+||| ++||+||
T Consensus 74 ~~~~~i~~~~~~~~~-----~~~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 142 (339)
T 1z57_A 74 NSTFRCVQMLEWFEH-----HGHICIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLH---SNKLTHT 142 (339)
T ss_dssp TCTTCBCCEEEEEEE-----TTEEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCceeeEeeeccccc-----CCcEEEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHH---HCCCcCC
Confidence 456678888887543 56789999999 9999998865432 35889999999999999999999 8999999
Q ss_pred cccCCceeeCC-------------------CCceEecccccccccCCc---CCCccccccccccCCCCcCccccchhHHH
Q 042634 259 DLKPSNVLLDG-------------------ELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGSEVSTSGDVYSFGI 316 (427)
Q Consensus 259 Dlkp~NIll~~-------------------~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwS~G~ 316 (427)
||||+||+++. ++.+||+|||.++..... ..||..|+|||++.+..++.++|||||||
T Consensus 143 Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~ 222 (339)
T 1z57_A 143 DLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGC 222 (339)
T ss_dssp CCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHH
T ss_pred CCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHH
Confidence 99999999987 668999999999876543 37899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCcccCCCccHHHHHHHh---cccchhcccCc-cccccccccch--------hhhccccccccccchHH
Q 042634 317 LLLETFTGKRPTNEMFTGNLTLHNFVKEA---LPERLAEIVDP-VLLVEREEGET--------SKANAHKQFTRSFSVKE 384 (427)
Q Consensus 317 vl~ell~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 384 (427)
++|||++|..||..... ......+... .+..+...... .........+. .................
T Consensus 223 il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (339)
T 1z57_A 223 ILIEYYLGFTVFPTHDS--KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDV 300 (339)
T ss_dssp HHHHHHHSSCSCCCSCH--HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSH
T ss_pred HHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchh
Confidence 99999999999975321 1111111111 11111110000 00000000000 00000000011122345
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 385 CLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 385 ~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
+++++.+++.+||+.||++|||++|++++
T Consensus 301 ~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 301 EHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 67889999999999999999999999864
No 213
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=270.41 Aligned_cols=194 Identities=21% Similarity=0.267 Sum_probs=151.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++..... ...+++..+..++.|++.||+||| +.||+||
T Consensus 76 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 146 (295)
T 2clq_A 76 LKHKNIVQYLGSFSE-----NGFIKIFMEQVPGGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLH---DNQIVHR 146 (295)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCSEEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCEeeEeeEEEe-----CCcEEEEEEeCCCCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHH---hCCEEcc
Confidence 479999999998644 5578999999999999999865421 134678889999999999999999 8999999
Q ss_pred cccCCceeeCC-CCceEecccccccccCC------cCCCccccccccccCCCC--cCccccchhHHHHHHHHHhCCCCCC
Q 042634 259 DLKPSNVLLDG-ELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSE--VSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 259 Dlkp~NIll~~-~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~--~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||+||+++. ++.+||+|||.++.... ...++..|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 147 dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 226 (295)
T 2clq_A 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226 (295)
T ss_dssp CCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTG
T ss_pred CCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCcc
Confidence 99999999987 89999999999987543 236888999999987643 7899999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
................... ..+..++.++.+++.+||+.||++|||++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 275 (295)
T 2clq_A 227 ELGEPQAAMFKVGMFKVHP-------------------------------EIPESMSAEAKAFILKCFEPDPDKRACAND 275 (295)
T ss_dssp GGSSHHHHHHHHHHHCCCC-------------------------------CCCTTSCHHHHHHHHHTTCSSTTTSCCHHH
T ss_pred CCCchhHHHHhhccccccc-------------------------------cccccCCHHHHHHHHHHccCChhhCCCHHH
Confidence 5321111000000000000 011224566889999999999999999999
Q ss_pred HHH
Q 042634 410 VAA 412 (427)
Q Consensus 410 v~~ 412 (427)
+++
T Consensus 276 ll~ 278 (295)
T 2clq_A 276 LLV 278 (295)
T ss_dssp HHT
T ss_pred Hhc
Confidence 986
No 214
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=8.6e-34 Score=274.83 Aligned_cols=143 Identities=24% Similarity=0.321 Sum_probs=121.7
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
.|++++++++.+.. ....++||||+ +|+|.+++..... ..+++..++.++.|++.||.|||+. ..||+|||
T Consensus 114 ~~~~iv~~~~~~~~-----~~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrD 184 (382)
T 2vx3_A 114 MKYYIVHLKRHFMF-----RNHLCLVFEML-SYNLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCD 184 (382)
T ss_dssp GGGGBCCEEEEEEE-----TTEEEEEEECC-CCBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCC
T ss_pred cceeEEEeeeeecc-----CCceEEEEecC-CCCHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCC
Confidence 35568888777543 46789999999 5699998865432 4589999999999999999999942 46999999
Q ss_pred ccCCceeeC--CCCceEecccccccccCCc---CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 260 LKPSNVLLD--GELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 260 lkp~NIll~--~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
|||+|||++ .++.+||+|||+|+..... ..+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 185 lkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 185 LKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCcccEEEecCCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999994 4778999999999876543 37889999999999999999999999999999999999999864
No 215
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7e-34 Score=266.59 Aligned_cols=190 Identities=22% Similarity=0.298 Sum_probs=154.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.. ..+++..+..++.|++.||+||| +.||+||
T Consensus 77 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 143 (303)
T 3a7i_A 77 CDSPYVTKYYGSYLK-----DTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLH---SEKKIHR 143 (303)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCEeEEEEEEec-----CCeEEEEEEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccC
Confidence 479999999998654 4578999999999999999864 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 144 dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 223 (303)
T 3a7i_A 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223 (303)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC
Confidence 99999999999999999999999765432 268889999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
. ......+....+.. .+..++.++.+++.+||+.||++|||++|+++
T Consensus 224 ~--~~~~~~~~~~~~~~-------------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 224 P--MKVLFLIPKNNPPT-------------------------------LEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp H--HHHHHHHHHSCCCC-------------------------------CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred H--HHHHHHhhcCCCCC-------------------------------CccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1 11111111100000 11123456899999999999999999999987
Q ss_pred HH
Q 042634 413 QL 414 (427)
Q Consensus 413 ~L 414 (427)
..
T Consensus 271 ~~ 272 (303)
T 3a7i_A 271 HK 272 (303)
T ss_dssp CH
T ss_pred Ch
Confidence 53
No 216
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.3e-34 Score=278.64 Aligned_cols=215 Identities=19% Similarity=0.191 Sum_probs=150.5
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+...........++||||+. |+|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 86 l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 158 (362)
T 3pg1_A 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLH---EAGVVHR 158 (362)
T ss_dssp CCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCcCEec
Confidence 46999999999875543344456799999996 78888876543 45899999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.++..... ..++..|+|||++.+ ..++.++||||+||++|||++|+.||.+..
T Consensus 159 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 238 (362)
T 3pg1_A 159 DLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238 (362)
T ss_dssp CCCGGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CCChHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999854332 267889999999877 678999999999999999999999997532
Q ss_pred CCCccHHHHHHHhcccchhc-----------ccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 333 TGNLTLHNFVKEALPERLAE-----------IVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
. ...+.........+.... ............ .........+..+.+++.+||+.||
T Consensus 239 ~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~li~~~L~~dP 305 (362)
T 3pg1_A 239 F-YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR------------AWTAVVPTADPVALDLIAKMLEFNP 305 (362)
T ss_dssp H-HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCC------------CHHHHSTTSCHHHHHHHHHHTCSSG
T ss_pred H-HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChh------------hHHhhCCCCCHHHHHHHHHHhcCCh
Confidence 1 111111111111111110 000000000000 0000112235668999999999999
Q ss_pred CCCCCHHHHHHH
Q 042634 402 RERMNMEEVAAQ 413 (427)
Q Consensus 402 ~~Rpt~~ev~~~ 413 (427)
++|||++|++++
T Consensus 306 ~~Rpt~~ell~h 317 (362)
T 3pg1_A 306 QRRISTEQALRH 317 (362)
T ss_dssp GGSCCHHHHHTS
T ss_pred hhCCCHHHHHcC
Confidence 999999999863
No 217
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.7e-34 Score=274.79 Aligned_cols=203 Identities=18% Similarity=0.216 Sum_probs=137.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..||||+++++.+.... .++...++||||+++|+|.+++..... ..+++.+++.++.|++.||+||| +.||+||
T Consensus 79 ~~h~~i~~~~~~~~~~~-~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~ 152 (336)
T 3fhr_A 79 SGGPHIVCILDVYENMH-HGKRCLLIIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLH---SHNIAHR 152 (336)
T ss_dssp TTSTTBCCEEEEEEEEE-TTEEEEEEEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred cCCCChHHHHHHHhhcc-CCCceEEEEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 57999999999865421 223457899999999999999976532 45999999999999999999999 8899999
Q ss_pred cccCCceeeCC---CCceEecccccccccCCc----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDG---ELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~---~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++. ++.+||+|||+++..... ..+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 153 dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (336)
T 3fhr_A 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 232 (336)
T ss_dssp CCSGGGEEESCSSTTCCEEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred CCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 99999999976 456999999999866433 26788999999998889999999999999999999999999754
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
...... ...... +...... .+......++.++.+++.+||+.||++|||++|++
T Consensus 233 ~~~~~~--~~~~~~-------~~~~~~~-----------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 286 (336)
T 3fhr_A 233 TGQAIS--PGMKRR-------IRLGQYG-----------------FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFM 286 (336)
T ss_dssp ---------------------------C-----------------CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred cchhhh--hhHHHh-------hhccccc-----------------cCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 221110 000000 0000000 00001123456789999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
+.
T Consensus 287 ~h 288 (336)
T 3fhr_A 287 NH 288 (336)
T ss_dssp HS
T ss_pred cC
Confidence 73
No 218
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.8e-34 Score=269.03 Aligned_cols=192 Identities=21% Similarity=0.255 Sum_probs=153.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.... ..+++..+..++.|++.||.||| +.||+||
T Consensus 81 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~ 149 (314)
T 3com_A 81 CDSPHVVKYYGSYFK-----NTDLWIVMEYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLH---FMRKIHR 149 (314)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCTTEEHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCCCccEEEEEEe-----CCEEEEEeecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCCcCC
Confidence 479999999998644 457899999999999999986322 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++.++.+||+|||.+...... ..++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 150 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 229 (314)
T 3com_A 150 DIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH 229 (314)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999765432 268889999999999999999999999999999999999997531
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.. ..........+.. . ..+...+..+.+++.+||+.||++|||++|+++
T Consensus 230 ~~--~~~~~~~~~~~~~--------~---------------------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 230 PM--RAIFMIPTNPPPT--------F---------------------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HH--HHHHHHHHSCCCC--------C---------------------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred hH--HHHHHHhcCCCcc--------c---------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 10 0000000000000 0 011223556899999999999999999999986
No 219
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-34 Score=271.40 Aligned_cols=217 Identities=19% Similarity=0.192 Sum_probs=153.3
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++ +|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 69 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 136 (346)
T 1ua2_A 69 LSHPNIIGLLDAFGH-----KSNISLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLH---QHWILHR 136 (346)
T ss_dssp CCCTTBCCEEEEECC-----TTCCEEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCCCeEEEEEee-----CCceEEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHH---HCCEECC
Confidence 469999999998543 5678999999964 8888876543 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||+++..... ..+|..|+|||++.+. .++.++|||||||++|||++|.+||.+.
T Consensus 137 Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~ 216 (346)
T 1ua2_A 137 DLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 216 (346)
T ss_dssp CCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 99999999999999999999999876432 2688899999998764 5899999999999999999999998753
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.. ...+................+.....+. ... ..............++.++.+++.+||+.||++|||++|++
T Consensus 217 ~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 290 (346)
T 1ua2_A 217 SD-LDQLTRIFETLGTPTEEQWPDMCSLPDY--VTF---KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 290 (346)
T ss_dssp SH-HHHHHHHHHHHCCCCTTTSSSTTSSTTC--CCC---CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred CH-HHHHHHHHHHcCCCChhhhhhhccCccc--ccc---cccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHh
Confidence 21 1112222221111100000000000000 000 00000000000122456789999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 291 ~h 292 (346)
T 1ua2_A 291 KM 292 (346)
T ss_dssp TS
T ss_pred cC
Confidence 64
No 220
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.1e-34 Score=269.81 Aligned_cols=203 Identities=23% Similarity=0.277 Sum_probs=151.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh----hhhccCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE----ALKNLNLLQRLSIAVDVASALDYLHHYCETP 254 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ 254 (427)
++||||+++++.+.. ....++||||+++++|.+++..... ....+++..+..++.|++.||+||| +.|
T Consensus 70 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ 141 (303)
T 2vwi_A 70 CHHPNIVSYYTSFVV-----KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNG 141 (303)
T ss_dssp CCCTTBCCEEEEEES-----SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred cCCCCEeeEEEEEee-----cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 469999999998644 4578999999999999998864211 1145899999999999999999999 899
Q ss_pred eeeccccCCceeeCCCCceEecccccccccCCc-----------CCCccccccccccCC-CCcCccccchhHHHHHHHHH
Q 042634 255 IVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 255 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell 322 (427)
|+||||||+||+++.++.+||+|||.++..... ..++..|+|||++.+ ..++.++|||||||++|||+
T Consensus 142 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~ 221 (303)
T 2vwi_A 142 QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA 221 (303)
T ss_dssp CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHH
T ss_pred CCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999999999999765321 267889999999866 56899999999999999999
Q ss_pred hCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCC
Q 042634 323 TGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPR 402 (427)
Q Consensus 323 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~ 402 (427)
+|+.||....... .........+........ .......++.++.+++.+||+.||+
T Consensus 222 ~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~li~~~l~~dp~ 277 (303)
T 2vwi_A 222 TGAAPYHKYPPMK--VLMLTLQNDPPSLETGVQ----------------------DKEMLKKYGKSFRKMISLCLQKDPE 277 (303)
T ss_dssp HSSCTTTTSCGGG--HHHHHHTSSCCCTTC---------------------------CCCCCCCHHHHHHHHHHCCSSGG
T ss_pred hCCCCCccCchhh--HHHHHhccCCCccccccc----------------------cchhhhhhhHHHHHHHHHHccCChh
Confidence 9999997642211 111111111110000000 0001112345688999999999999
Q ss_pred CCCCHHHHHHH
Q 042634 403 ERMNMEEVAAQ 413 (427)
Q Consensus 403 ~Rpt~~ev~~~ 413 (427)
+|||++|+++.
T Consensus 278 ~Rps~~~ll~h 288 (303)
T 2vwi_A 278 KRPTAAELLRH 288 (303)
T ss_dssp GSCCHHHHHTS
T ss_pred hCcCHHHHhhC
Confidence 99999999873
No 221
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.5e-34 Score=274.46 Aligned_cols=224 Identities=18% Similarity=0.163 Sum_probs=154.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+....+......++||||+. |+|.+++.. ..+++..+..++.|++.||+||| +.||+||
T Consensus 66 l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~ 136 (353)
T 2b9h_A 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHR 136 (353)
T ss_dssp CCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCeecC
Confidence 46999999999876655555677899999995 688888754 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc----------------CCCccccccccccCC-CCcCccccchhHHHHHHHH
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA----------------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----------------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~el 321 (427)
||||+||+++.++.+||+|||+++..... ..||..|+|||++.+ ..++.++|||||||++|||
T Consensus 137 Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l 216 (353)
T 2b9h_A 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216 (353)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHH
Confidence 99999999999999999999999865421 257889999998754 6789999999999999999
Q ss_pred HhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 322 FTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 322 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
++|+.||.+..... .+.........+.......... .........................++.++.+++.+||+.||
T Consensus 217 ~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 294 (353)
T 2b9h_A 217 FLRRPIFPGRDYRH-QLLLIFGIIGTPHSDNDLRCIE-SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294 (353)
T ss_dssp HHSSCSCCCSSHHH-HHHHHHHHHCCCCSTTTTTTCC-CHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSG
T ss_pred HhCCCCCCCCCcHH-HHHHHHHHhCCCchhccccccc-cchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCc
Confidence 99999997642111 1111111111100000000000 000000000000000000000112345678999999999999
Q ss_pred CCCCCHHHHHHH
Q 042634 402 RERMNMEEVAAQ 413 (427)
Q Consensus 402 ~~Rpt~~ev~~~ 413 (427)
++|||++|++++
T Consensus 295 ~~Rpt~~ell~h 306 (353)
T 2b9h_A 295 AKRITAKEALEH 306 (353)
T ss_dssp GGSCCHHHHHTS
T ss_pred ccCCCHHHHhcC
Confidence 999999999863
No 222
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.4e-34 Score=278.39 Aligned_cols=146 Identities=19% Similarity=0.340 Sum_probs=118.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhh-----hhccCHHHHHHHHHHHHHHHHHHhhcCCC
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREA-----LKNLNLLQRLSIAVDVASALDYLHHYCET 253 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----~~~l~~~~~~~~~~~i~~~L~~LH~~~~~ 253 (427)
++||||+++++++.. ......++||||+ .|+|.+++...... ...+++..++.++.||+.||+||| +.
T Consensus 75 l~hpniv~~~~~~~~---~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~ 147 (405)
T 3rgf_A 75 LKHPNVISLQKVFLS---HADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---AN 147 (405)
T ss_dssp CCCTTBCCCCEEEEE---TTTTEEEEEEECC-SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred cCCCCeeeEeeEEec---CCCCeEEEEEeCC-CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 469999999998643 2245789999999 46888877543211 124899999999999999999999 89
Q ss_pred CeeeccccCCceee----CCCCceEecccccccccCCc---------CCCccccccccccCCC-CcCccccchhHHHHHH
Q 042634 254 PIVHCDLKPSNVLL----DGELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLL 319 (427)
Q Consensus 254 ~ivHrDlkp~NIll----~~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ 319 (427)
||+||||||+|||+ +.++.+||+|||+|+..... ..||+.|+|||++.+. .++.++|||||||++|
T Consensus 148 ~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ 227 (405)
T 3rgf_A 148 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA 227 (405)
T ss_dssp TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHH
T ss_pred CEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHH
Confidence 99999999999999 67789999999999865432 2678999999999874 5899999999999999
Q ss_pred HHHhCCCCCCcc
Q 042634 320 ETFTGKRPTNEM 331 (427)
Q Consensus 320 ell~g~~pf~~~ 331 (427)
||++|+.||...
T Consensus 228 ell~g~~pf~~~ 239 (405)
T 3rgf_A 228 ELLTSEPIFHCR 239 (405)
T ss_dssp HHHHSSCTTCCC
T ss_pred HHHhCCCCCCCc
Confidence 999999999754
No 223
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.8e-34 Score=285.91 Aligned_cols=192 Identities=21% Similarity=0.253 Sum_probs=152.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++|||||++|+|.+++... ..+++..+..++.||+.||+||| +.||+||
T Consensus 103 l~hpniv~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 170 (504)
T 3q5i_A 103 LDHPNIIKLFDVFED-----KKYFYLVTEFYEGGELFEQIINR----HKFDECDAANIMKQILSGICYLH---KHNIVHR 170 (504)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred CCCCCCCeEEEEEEc-----CCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeC
Confidence 479999999998543 56789999999999999988654 45999999999999999999999 8999999
Q ss_pred cccCCceeeCCCC---ceEecccccccccCCc-----CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGEL---TAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~~---~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++.++ .+||+|||+|+..... ..||+.|+|||++. ..++.++||||+||++|+|++|..||.+
T Consensus 171 Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~ 249 (504)
T 3q5i_A 171 DIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG 249 (504)
T ss_dssp CCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999998765 6999999999876543 37899999999986 4689999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ..+...+..... .. ........+.++.+++.+||+.||.+|||++|+
T Consensus 250 ~~~--~~~~~~i~~~~~-----------~~-----------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~ 299 (504)
T 3q5i_A 250 QND--QDIIKKVEKGKY-----------YF-----------------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEA 299 (504)
T ss_dssp SSH--HHHHHHHHHCCC-----------CC-----------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCH--HHHHHHHHcCCC-----------CC-----------------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 311 111111111000 00 000112235668999999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
+++
T Consensus 300 l~h 302 (504)
T 3q5i_A 300 LNS 302 (504)
T ss_dssp HTS
T ss_pred hcC
Confidence 864
No 224
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.1e-34 Score=275.67 Aligned_cols=218 Identities=20% Similarity=0.262 Sum_probs=151.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. ....++||||+++++|.++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 81 l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~ 148 (331)
T 4aaa_A 81 LRHENLVNLLEVCKK-----KKRWYLVFEFVDHTILDDLELFP----NGLDYQVVQKYLFQIINGIGFCH---SHNIIHR 148 (331)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCSEEHHHHHHHST----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCEeeEEEEeec-----CCEEEEEEecCCcchHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHH---HCCEEcc
Confidence 469999999998654 56789999999998888876543 34899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCC-CcCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGS-EVSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~-~~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.++.... ...++..|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 149 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 149 DIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp CCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999976543 23788899999998875 7899999999999999999999999764
Q ss_pred cCCCccHHHHHHHh--cccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 042634 332 FTGNLTLHNFVKEA--LPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEE 409 (427)
Q Consensus 332 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~e 409 (427)
.... .+....... ..+.........-.......... . ...........++.++.+++.+||+.||++|||++|
T Consensus 229 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 303 (331)
T 4aaa_A 229 SDID-QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEI---K-EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAE 303 (331)
T ss_dssp SHHH-HHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCC---S-SCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGG
T ss_pred CcHH-HHHHHHHHhCCCChhhhhHhhhccccccccCccc---c-ccchhhhcccchhHHHHHHHHHHhccCcccCCCHHH
Confidence 2211 111111110 00000000000000000000000 0 000000011234677999999999999999999999
Q ss_pred HHHH
Q 042634 410 VAAQ 413 (427)
Q Consensus 410 v~~~ 413 (427)
++++
T Consensus 304 ll~h 307 (331)
T 4aaa_A 304 LLHH 307 (331)
T ss_dssp GGGS
T ss_pred HhcC
Confidence 9874
No 225
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=4e-34 Score=274.80 Aligned_cols=228 Identities=19% Similarity=0.194 Sum_probs=152.8
Q ss_pred cccccchhhhccccccCCC--CCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCee
Q 042634 179 IRHRNLVKIITSCASVDFQ--GNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~--~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~iv 256 (427)
++||||+++++++...... .....++||||+++ +|...+.........+++..+..++.|++.||.|||.. +.||+
T Consensus 76 l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~iv 153 (360)
T 3e3p_A 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVC 153 (360)
T ss_dssp HCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCB
T ss_pred cCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCee
Confidence 4799999999987553221 12236899999964 55544433222225688999999999999999999943 57999
Q ss_pred eccccCCceeeCC-CCceEecccccccccCCcC-----CCccccccccccCCCC-cCccccchhHHHHHHHHHhCCCCCC
Q 042634 257 HCDLKPSNVLLDG-ELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 257 HrDlkp~NIll~~-~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~-~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
||||||+|||++. ++.+||+|||+|+...... .+|..|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 154 H~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~ 233 (360)
T 3e3p_A 154 HRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233 (360)
T ss_dssp CSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcC
Confidence 9999999999986 8999999999998764432 6788999999987654 8999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhccc--chhcccCcccc-ccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCC
Q 042634 330 EMFTGNLTLHNFVKEALPE--RLAEIVDPVLL-VEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMN 406 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt 406 (427)
+... ...+.......... ......++... ......... .....+ ......++.++.+++.+||+.||++|||
T Consensus 234 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt 308 (360)
T 3e3p_A 234 GDNS-AGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGI--PWSNVF--SDHSLKDAKEAYDLLSALLQYLPEERMK 308 (360)
T ss_dssp CSSH-HHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCC--CHHHHT--TTCCCTTHHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCh-HHHHHHHHHHcCCCCHHHHHhcccchhhccccccccC--Cccccc--chhhccccHHHHHHHHHHhccCccccCC
Confidence 6321 11122222211111 00000110000 000000000 000000 0011224677999999999999999999
Q ss_pred HHHHHHH
Q 042634 407 MEEVAAQ 413 (427)
Q Consensus 407 ~~ev~~~ 413 (427)
+.|++++
T Consensus 309 ~~e~l~h 315 (360)
T 3e3p_A 309 PYEALCH 315 (360)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999863
No 226
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=272.37 Aligned_cols=197 Identities=20% Similarity=0.240 Sum_probs=148.4
Q ss_pred ccccchhhhccccccCCC-CCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 180 RHRNLVKIITSCASVDFQ-GNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+||||+++++.+...... .....++||||+++|+|.+++..... ..+++..+..++.|++.||+||| +.||+||
T Consensus 79 ~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 153 (326)
T 2x7f_A 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLH---QHKVIHR 153 (326)
T ss_dssp CSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccc
Confidence 799999999987553221 13567999999999999999875432 46899999999999999999999 8899999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc------CCCccccccccccC-----CCCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA------TNNFFNFQIAEYGM-----GSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~y~aPE~~~-----~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++.+||+|||++...... ..++..|+|||++. +..++.++|||||||++|||++|..|
T Consensus 154 dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 233 (326)
T 2x7f_A 154 DIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233 (326)
T ss_dssp CCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCT
T ss_pred CCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999865432 26889999999987 56689999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|..... . .............. ....++..+.+++.+||+.||++|||+
T Consensus 234 ~~~~~~----~-~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~ 281 (326)
T 2x7f_A 234 LCDMHP----M-RALFLIPRNPAPRL---------------------------KSKKWSKKFQSFIESCLVKNHSQRPAT 281 (326)
T ss_dssp TTTSCH----H-HHHHHHHHSCCCCC---------------------------SCSCSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred CCCCcH----H-HHHHHhhcCccccC---------------------------CccccCHHHHHHHHHHhccChhhCCCH
Confidence 965321 0 10000000000000 111234568899999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|+++.
T Consensus 282 ~~ll~h 287 (326)
T 2x7f_A 282 EQLMKH 287 (326)
T ss_dssp HHHHTS
T ss_pred HHHhhC
Confidence 999873
No 227
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.5e-34 Score=267.28 Aligned_cols=215 Identities=20% Similarity=0.253 Sum_probs=153.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+. ++|.+++..... ..+++..+..++.|++.||+||| +.||+||
T Consensus 59 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 127 (299)
T 2r3i_A 59 LNHPNIVKLLDVIHT-----ENKLYLVFEFLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCH---SHRVLHR 127 (299)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred cCCCCeeeEEEEEec-----CCceEEEEEccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHH---HCCccCC
Confidence 469999999998644 467899999996 699988865432 45889999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC------cCCCccccccccccCCCC-cCccccchhHHHHHHHHHhCCCCCCcc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE------ATNNFFNFQIAEYGMGSE-VSTSGDVYSFGILLLETFTGKRPTNEM 331 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~y~aPE~~~~~~-~~~~~DiwS~G~vl~ell~g~~pf~~~ 331 (427)
||||+||+++.++.+||+|||.++.... ...++..|+|||++.+.. ++.++|||||||++|||++|+.||.+.
T Consensus 128 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp CCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCCHHHeEEcCCCCEEECcchhhhhccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 9999999999999999999999976532 226788999999988765 799999999999999999999999763
Q ss_pred cCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccc---cchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 332 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRS---FSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
... ..+........... ............ ... ....+... ......+.++.+++.+||+.||++|||++
T Consensus 208 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 279 (299)
T 2r3i_A 208 SEI-DQLFRIFRTLGTPD-EVVWPGVTSMPD-----YKP-SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279 (299)
T ss_dssp SHH-HHHHHHHHHHCCCC-TTTSTTGGGSTT-----CCT-TSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred cHH-HHHHHHHHHhCCCc-hhhhhHhhcCcc-----cch-hhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHH
Confidence 211 11111111111100 000000000000 000 00000000 00112356789999999999999999999
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
|+++
T Consensus 280 ~~l~ 283 (299)
T 2r3i_A 280 AALA 283 (299)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9986
No 228
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=7.2e-34 Score=274.33 Aligned_cols=228 Identities=17% Similarity=0.227 Sum_probs=155.0
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC-Ceee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET-PIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~-~ivH 257 (427)
..||||+++++.+.... .+....++||||+ +++|.+++..... ..+++..+..++.||+.||+||| ++ ||+|
T Consensus 83 ~~~~~i~~~~~~~~~~~-~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH 155 (373)
T 1q8y_A 83 MGANHILKLLDHFNHKG-PNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMH---RRCGIIH 155 (373)
T ss_dssp HHHTTBCCCCEEEEEEE-TTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCEEC
T ss_pred cccchHHHHHHHhhccC-CCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHH---hcCCEEe
Confidence 45999999999865421 1223678999999 9999999865432 45899999999999999999999 77 9999
Q ss_pred ccccCCceeeC------CCCceEecccccccccCCc---CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCC
Q 042634 258 CDLKPSNVLLD------GELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 258 rDlkp~NIll~------~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
|||||+|||++ ..+.+||+|||+|+..... ..+|..|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 156 ~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 235 (373)
T 1q8y_A 156 TDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235 (373)
T ss_dssp SCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC
T ss_pred cCCChHHeEEeccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 99999999994 4458999999999876543 37899999999999999999999999999999999999999
Q ss_pred CcccCCCc-----cHHHHHHHh--cccchh-------cccCccccccccccchhhhccccccccccchHHHHHHHHHHHh
Q 042634 329 NEMFTGNL-----TLHNFVKEA--LPERLA-------EIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGV 394 (427)
Q Consensus 329 ~~~~~~~~-----~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 394 (427)
........ .+....... .+..+. ...+..-.......................+..++.++.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 315 (373)
T 1q8y_A 236 EPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLS 315 (373)
T ss_dssp ---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHG
T ss_pred CCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHH
Confidence 86432111 111111111 010000 0000000000000000000000000111234667889999999
Q ss_pred hcCCCCCCCCCCHHHHHHH
Q 042634 395 TCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 395 ~cl~~dP~~Rpt~~ev~~~ 413 (427)
+||+.||++|||++|++++
T Consensus 316 ~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 316 PMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp GGGCSSTTTCBCHHHHHTC
T ss_pred HHhccCccccCCHHHHhhC
Confidence 9999999999999999863
No 229
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.4e-33 Score=263.71 Aligned_cols=191 Identities=21% Similarity=0.285 Sum_probs=151.8
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
.||||+++++.+.. +...++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+|||
T Consensus 82 ~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~d 149 (298)
T 1phk_A 82 GHPNIIQLKDTYET-----NTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALH---KLNIVHRD 149 (298)
T ss_dssp TCTTBCCEEEEEEC-----SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSC
T ss_pred CCCCEeeeeeeecc-----CCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCC
Confidence 59999999998543 56789999999999999998653 45899999999999999999999 89999999
Q ss_pred ccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccC------CCCcCccccchhHHHHHHHHHhCCCCC
Q 042634 260 LKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGM------GSEVSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 260 lkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~------~~~~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
|||+||+++.++.+||+|||.+...... ..++..|+|||++. ...++.++|||||||++|||++|+.||
T Consensus 150 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~ 229 (298)
T 1phk_A 150 LKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229 (298)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred CCcceEEEcCCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCC
Confidence 9999999999999999999999875433 26888999999985 456889999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
..... ......+...... .. ......++.++.+++.+||+.||++|||++
T Consensus 230 ~~~~~--~~~~~~~~~~~~~----~~------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 279 (298)
T 1phk_A 230 WHRKQ--MLMLRMIMSGNYQ----FG------------------------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAE 279 (298)
T ss_dssp CCSSH--HHHHHHHHHTCCC----CC------------------------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred cCccH--HHHHHHHhcCCcc----cC------------------------cccccccCHHHHHHHHHHccCCcccCCCHH
Confidence 65311 1111111110000 00 001123456789999999999999999999
Q ss_pred HHHH
Q 042634 409 EVAA 412 (427)
Q Consensus 409 ev~~ 412 (427)
|+++
T Consensus 280 ~ll~ 283 (298)
T 1phk_A 280 EALA 283 (298)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 9985
No 230
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.6e-34 Score=267.57 Aligned_cols=192 Identities=19% Similarity=0.235 Sum_probs=149.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.||+||
T Consensus 73 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~ 141 (302)
T 2j7t_A 73 CDHPYIVKLLGAYYH-----DGKLWIMIEFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLH---SKRIIHR 141 (302)
T ss_dssp CCCTTBCCEEEEEEC-----C-CEEEEEECCTTEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCEeeeeeeeee-----CCeEEEEEEeCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHh---cCCcccC
Confidence 479999999998644 467899999999999998876432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEeccccccccc------CCcCCCcccccccccc-----CCCCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFL------PEATNNFFNFQIAEYG-----MGSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~------~~~~~~~~~y~aPE~~-----~~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+||+++.++.+||+|||++... .....++..|+|||++ .+..++.++|||||||++|||++|..|
T Consensus 142 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 221 (302)
T 2j7t_A 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221 (302)
T ss_dssp CCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999997643 1233788999999998 466789999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|..... .............. ...+..++.++.+++.+||+.||++|||+
T Consensus 222 ~~~~~~-----~~~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 270 (302)
T 2j7t_A 222 HHELNP-----MRVLLKIAKSDPPT--------------------------LLTPSKWSVEFRDFLKIALDKNPETRPSA 270 (302)
T ss_dssp TTTSCH-----HHHHHHHHHSCCCC--------------------------CSSGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred CccCCH-----HHHHHHHhccCCcc--------------------------cCCccccCHHHHHHHHHHcccChhhCCCH
Confidence 975321 11111100000000 00122345668999999999999999999
Q ss_pred HHHHH
Q 042634 408 EEVAA 412 (427)
Q Consensus 408 ~ev~~ 412 (427)
+|+++
T Consensus 271 ~~ll~ 275 (302)
T 2j7t_A 271 AQLLE 275 (302)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99986
No 231
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=7.7e-34 Score=279.56 Aligned_cols=196 Identities=20% Similarity=0.309 Sum_probs=143.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhc---cCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKN---LNLLQRLSIAVDVASALDYLHHYCETPI 255 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~---l~~~~~~~~~~~i~~~L~~LH~~~~~~i 255 (427)
.+|||||++++.+. .....++||||| +|+|.+++......... .++..++.++.||+.||+||| +.||
T Consensus 66 ~~HpnIv~~~~~~~-----~~~~~~lv~E~~-~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i 136 (434)
T 2rio_A 66 DDHPNVIRYYCSET-----TDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKI 136 (434)
T ss_dssp TTSTTBCCEEEEEE-----CSSEEEEEECCC-SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTE
T ss_pred cCCCCcCeEEEEEe-----cCCeEEEEEecC-CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCc
Confidence 47999999998743 356789999999 57999998765321111 133346789999999999999 8999
Q ss_pred eeccccCCceeeCCC-------------CceEecccccccccCCc----------CCCccccccccccCC-------CCc
Q 042634 256 VHCDLKPSNVLLDGE-------------LTAHVGDFGLAKFLPEA----------TNNFFNFQIAEYGMG-------SEV 305 (427)
Q Consensus 256 vHrDlkp~NIll~~~-------------~~~kL~DFG~a~~~~~~----------~~~~~~y~aPE~~~~-------~~~ 305 (427)
+||||||+|||++.+ +.+||+|||+|+..... ..||+.|+|||++.+ ..+
T Consensus 137 vHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 216 (434)
T 2rio_A 137 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRL 216 (434)
T ss_dssp ECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCC
T ss_pred cccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCc
Confidence 999999999999654 48999999999876432 268899999999876 568
Q ss_pred CccccchhHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHH
Q 042634 306 STSGDVYSFGILLLETFT-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKE 384 (427)
Q Consensus 306 ~~~~DiwS~G~vl~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (427)
+.++|||||||++|||++ |+.||....... .......... .. ........
T Consensus 217 ~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~~i~~~~~~~--~~------------------------~~~~~~~~ 267 (434)
T 2rio_A 217 TRSIDIFSMGCVFYYILSKGKHPFGDKYSRE---SNIIRGIFSL--DE------------------------MKCLHDRS 267 (434)
T ss_dssp CTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH---HHHHHTCCCC--CC------------------------CTTCCCHH
T ss_pred chhhhhHhHHHHHHHHHhCCCCCCCCchhhH---HHHhcCCCCc--cc------------------------cccccccc
Confidence 999999999999999999 999996532111 1111110000 00 00112345
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 385 CLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 385 ~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.+.++.+++.+||+.||++|||+.||++
T Consensus 268 ~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 268 LIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred chHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 6788999999999999999999999986
No 232
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=263.55 Aligned_cols=192 Identities=22% Similarity=0.330 Sum_probs=147.8
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ......++||||++++ +.+++..... ..+++..+..++.|++.||+||| ++||+||
T Consensus 63 l~h~~i~~~~~~~~~---~~~~~~~lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~ 133 (305)
T 2wtk_C 63 LRHKNVIQLVDVLYN---EEKQKMYMVMEYCVCG-MQEMLDSVPE--KRFPVCQAHGYFCQLIDGLEYLH---SQGIVHK 133 (305)
T ss_dssp CCCTTBCCEEEEEEC---C---CEEEEEECCSEE-HHHHHHHSTT--CSCCHHHHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred cCCCCeeEEEEEEEc---CCCCeEEEEehhccCC-HHHHHHhCcc--cccCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 469999999998532 2245689999999766 6666654322 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCC--------cCCCccccccccccCCCC--cCccccchhHHHHHHHHHhCCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPE--------ATNNFFNFQIAEYGMGSE--VSTSGDVYSFGILLLETFTGKRPT 328 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~--------~~~~~~~y~aPE~~~~~~--~~~~~DiwS~G~vl~ell~g~~pf 328 (427)
||||+||+++.++.+||+|||.+..... ...++..|+|||++.+.. ++.++|||||||++|||++|+.||
T Consensus 134 dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 213 (305)
T 2wtk_C 134 DIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213 (305)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999987542 226889999999987644 478999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 329 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
.... ............. ..+..++.++.+++.+||+.||++|||++
T Consensus 214 ~~~~-----~~~~~~~i~~~~~-----------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 259 (305)
T 2wtk_C 214 EGDN-----IYKLFENIGKGSY-----------------------------AIPGDCGPPLSDLLKGMLEYEPAKRFSIR 259 (305)
T ss_dssp CCSS-----HHHHHHHHHHCCC-----------------------------CCCSSSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CCch-----HHHHHHHHhcCCC-----------------------------CCCCccCHHHHHHHHHHccCChhhCCCHH
Confidence 7531 1111111000000 01112355688999999999999999999
Q ss_pred HHHHH
Q 042634 409 EVAAQ 413 (427)
Q Consensus 409 ev~~~ 413 (427)
|++++
T Consensus 260 ~ll~~ 264 (305)
T 2wtk_C 260 QIRQH 264 (305)
T ss_dssp HHHHS
T ss_pred HHhcC
Confidence 99874
No 233
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.1e-33 Score=272.89 Aligned_cols=220 Identities=15% Similarity=0.150 Sum_probs=149.1
Q ss_pred cccccchhhhccccccCCC-CCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDFQ-GNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++++...... .....++||||+. ++|.+++.. .+++..+..++.|++.||+||| +.||+|
T Consensus 98 l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH 167 (371)
T 4exu_A 98 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIH---SAGVVH 167 (371)
T ss_dssp CCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred cCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---HCCCcC
Confidence 5699999999986542211 1123489999995 788877743 3899999999999999999999 889999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc---CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+||+++.++.+||+|||+++..... ..+|..|+|||++.+ ..++.++|||||||++|||++|+.||.+...
T Consensus 168 ~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~ 247 (371)
T 4exu_A 168 RDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 247 (371)
T ss_dssp SCCCGGGEEECTTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred CCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 999999999999999999999999876543 377899999999887 6789999999999999999999999975321
Q ss_pred CCccHHHHHHHhcc--cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 334 GNLTLHNFVKEALP--ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 334 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
. ..+......... ......+...... ....................++.++.+++.+||+.||++|||++|++
T Consensus 248 ~-~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 322 (371)
T 4exu_A 248 L-DQLTQILKVTGVPGTEFVQKLNDKAAK----SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 322 (371)
T ss_dssp H-HHHHHHHHHHCCCCHHHHTTCSCHHHH----HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred H-HHHHHHHHHhCCCcHHHHHHhhhhhhh----hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHh
Confidence 1 111111111111 0111101000000 00000000000000001122456789999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 323 ~h 324 (371)
T 4exu_A 323 TH 324 (371)
T ss_dssp TS
T ss_pred cC
Confidence 64
No 234
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.98 E-value=5.6e-33 Score=265.99 Aligned_cols=219 Identities=19% Similarity=0.198 Sum_probs=150.8
Q ss_pred cccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccc
Q 042634 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDL 260 (427)
Q Consensus 181 Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDl 260 (427)
|++++.+++.+.. ....++||||+ ++++.+++..... ..+++..++.++.||+.||+||| +.||+||||
T Consensus 81 ~~~~~~~~~~~~~-----~~~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dl 149 (355)
T 2eu9_A 81 KFLCVLMSDWFNF-----HGHMCIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDL 149 (355)
T ss_dssp CSCBCCEEEEEEE-----TTEEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCC
T ss_pred ceeEEEeeeeeee-----CCeEEEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCC
Confidence 3446776666433 45789999999 7777777754322 45899999999999999999999 899999999
Q ss_pred cCCceee-------------------CCCCceEecccccccccCCc---CCCccccccccccCCCCcCccccchhHHHHH
Q 042634 261 KPSNVLL-------------------DGELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMGSEVSTSGDVYSFGILL 318 (427)
Q Consensus 261 kp~NIll-------------------~~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl 318 (427)
||+|||+ +.++.+||+|||+++..... ..||..|+|||++.+..++.++|||||||++
T Consensus 150 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 229 (355)
T 2eu9_A 150 KPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCIL 229 (355)
T ss_dssp CGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred CHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHH
Confidence 9999999 56789999999999875443 3789999999999999999999999999999
Q ss_pred HHHHhCCCCCCcccCCCccHHHHHHHh---cccchhccc-Cccccccccccc--------hhhhccccccccccchHHHH
Q 042634 319 LETFTGKRPTNEMFTGNLTLHNFVKEA---LPERLAEIV-DPVLLVEREEGE--------TSKANAHKQFTRSFSVKECL 386 (427)
Q Consensus 319 ~ell~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 386 (427)
|||++|+.||...... .....+... .+..+.... ...........+ ...................+
T Consensus 230 ~el~~g~~pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (355)
T 2eu9_A 230 FEYYRGFTLFQTHENR--EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEH 307 (355)
T ss_dssp HHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHH
T ss_pred HHHHhCCCCCCCCCHH--HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhH
Confidence 9999999999753211 111111111 111111000 000000000000 00000000001111233456
Q ss_pred HHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 387 VSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 387 ~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
.++.+++.+||+.||++|||++|+++
T Consensus 308 ~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 308 VQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 78999999999999999999999985
No 235
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.98 E-value=2e-33 Score=276.08 Aligned_cols=190 Identities=20% Similarity=0.245 Sum_probs=141.8
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeecc
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCD 259 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrD 259 (427)
+|||||++++.+.. ....++||||| +|+|.+++.... ..+++..+..++.||+.||+||| +.||+|||
T Consensus 76 ~HpnIv~l~~~~~~-----~~~~~lv~E~~-~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrD 143 (432)
T 3p23_A 76 EHPNVIRYFCTEKD-----RQFQYIAIELC-AATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLH---SLNIVHRD 143 (432)
T ss_dssp CCTTBCCEEEEEEE-----TTEEEEEEECC-SEEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCC
T ss_pred CCCCcCeEEEEEec-----CCEEEEEEECC-CCCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHH---HCcCEeCC
Confidence 79999999987543 56789999999 569999987553 23455567889999999999999 89999999
Q ss_pred ccCCceeeCC-----CCceEecccccccccCCc---------CCCccccccccccC---CCCcCccccchhHHHHHHHHH
Q 042634 260 LKPSNVLLDG-----ELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGM---GSEVSTSGDVYSFGILLLETF 322 (427)
Q Consensus 260 lkp~NIll~~-----~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~---~~~~~~~~DiwS~G~vl~ell 322 (427)
|||+|||++. ...+||+|||+|+..... ..||+.|+|||++. ...++.++|||||||++|||+
T Consensus 144 lKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ell 223 (432)
T 3p23_A 144 LKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVI 223 (432)
T ss_dssp CSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHH
Confidence 9999999943 346889999999876432 26899999999997 456788999999999999999
Q ss_pred h-CCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 323 T-GKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 323 ~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
+ |..||..... .............. .......+..+.+++.+||+.||
T Consensus 224 t~g~~pf~~~~~------~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~li~~~L~~dP 272 (432)
T 3p23_A 224 SEGSHPFGKSLQ------RQANILLGACSLDC-------------------------LHPEKHEDVIARELIEKMIAMDP 272 (432)
T ss_dssp TTSCBTTBSTTT------HHHHHHTTCCCCTT-------------------------SCTTCHHHHHHHHHHHHHSCSSG
T ss_pred cCCCCCcchhhH------HHHHHHhccCCccc-------------------------cCccccccHHHHHHHHHHHhCCH
Confidence 9 9999854211 00000000000000 00112345567899999999999
Q ss_pred CCCCCHHHHHH
Q 042634 402 RERMNMEEVAA 412 (427)
Q Consensus 402 ~~Rpt~~ev~~ 412 (427)
++|||++||++
T Consensus 273 ~~Rps~~evl~ 283 (432)
T 3p23_A 273 QKRPSAKHVLK 283 (432)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHHh
Confidence 99999999984
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.98 E-value=7.4e-33 Score=265.38 Aligned_cols=220 Identities=15% Similarity=0.169 Sum_probs=150.6
Q ss_pred cccccchhhhccccccCC-CCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVDF-QGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++.+..... ......++||||+. ++|.+++.. .+++..+..++.|++.||+||| ++||+|
T Consensus 80 l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH---~~~ivH 149 (353)
T 3coi_A 80 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIH---SAGVVH 149 (353)
T ss_dssp CCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred cCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 469999999998654211 11123589999995 788888753 3899999999999999999999 899999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc---CCCccccccccccCC-CCcCccccchhHHHHHHHHHhCCCCCCcccC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA---TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILLLETFTGKRPTNEMFT 333 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~ 333 (427)
|||||+||+++.++.+||+|||+++..... ..+|..|+|||++.+ ..++.++|||||||++|||++|+.||.+...
T Consensus 150 ~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 229 (353)
T 3coi_A 150 RDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 229 (353)
T ss_dssp SSCCGGGEEECTTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH
T ss_pred CCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999999999999999999999876443 267899999999887 6789999999999999999999999975321
Q ss_pred CCccHHHHHHHhc-c-cchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 042634 334 GNLTLHNFVKEAL-P-ERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 334 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
. ..+........ + ......+...... ....................++.++.+++.+||+.||++|||++|++
T Consensus 230 ~-~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l 304 (353)
T 3coi_A 230 L-DQLTQILKVTGVPGTEFVQKLNDKAAK----SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 304 (353)
T ss_dssp H-HHHHHHHHHHCBCCHHHHTTCSCHHHH----HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred H-HHHHHHHHHhCCCCHHHHHHHhhHHHH----HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 1 11111111111 0 0010000000000 00000000000000001123466789999999999999999999998
Q ss_pred HH
Q 042634 412 AQ 413 (427)
Q Consensus 412 ~~ 413 (427)
++
T Consensus 305 ~h 306 (353)
T 3coi_A 305 TH 306 (353)
T ss_dssp TS
T ss_pred cC
Confidence 63
No 237
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.98 E-value=1.6e-33 Score=266.25 Aligned_cols=182 Identities=19% Similarity=0.243 Sum_probs=149.0
Q ss_pred ccccchhhhccccccCCCCCCccceeeeeecC-CCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEFMVN-GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.||||+++++.+.. ....++|||++.+ ++|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 106 ~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~ 173 (320)
T 3a99_A 106 GFSGVIRLLDWFER-----PDSFVLILERPEPVQDLFDFITER----GALQEELARSFFWQVLEAVRHCH---NCGVLHR 173 (320)
T ss_dssp SSCSBCCEEEEEEC-----SSEEEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCCCceEEEEEEec-----CCcEEEEEEcCCCCccHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeC
Confidence 57999999998543 5678999999976 8999988653 45899999999999999999999 8999999
Q ss_pred cccCCceeeC-CCCceEecccccccccCCc----CCCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLD-GELTAHVGDFGLAKFLPEA----TNNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~-~~~~~kL~DFG~a~~~~~~----~~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++ .++.+||+|||+++..... ..||..|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 174 Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 253 (320)
T 3a99_A 174 DIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 253 (320)
T ss_dssp CCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH
T ss_pred CCCHHHEEEeCCCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh
Confidence 9999999998 7889999999999876543 268899999999877665 788999999999999999999996420
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
....... . .+..++.++.+++.+||+.||++|||++|+++
T Consensus 254 -------~~~~~~~------~---------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 254 -------EIIRGQV------F---------------------------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -------HHHHCCC------C---------------------------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------hhhcccc------c---------------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1100000 0 01113456889999999999999999999986
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
.
T Consensus 294 h 294 (320)
T 3a99_A 294 H 294 (320)
T ss_dssp S
T ss_pred C
Confidence 3
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.98 E-value=8.3e-34 Score=269.05 Aligned_cols=198 Identities=21% Similarity=0.207 Sum_probs=134.1
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchh-hhhccCHHHHHHHHHHHHHHHHHHhhcCCC-Cee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNRE-ALKNLNLLQRLSIAVDVASALDYLHHYCET-PIV 256 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~-~iv 256 (427)
++||||+++++.+.. ....++||||++ |+|.+++..... ....+++..+..++.|++.||.||| +. ||+
T Consensus 78 ~~h~niv~~~~~~~~-----~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~iv 148 (327)
T 3aln_A 78 SDCPYIVQFYGALFR-----EGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKII 148 (327)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCC
T ss_pred CCCCcEeeeeeEEEe-----CCceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEe
Confidence 579999999998644 457899999996 577777653211 1245889999999999999999999 77 999
Q ss_pred eccccCCceeeCCCCceEecccccccccCCcC-----CCcccccccccc----CCCCcCccccchhHHHHHHHHHhCCCC
Q 042634 257 HCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYG----MGSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 257 HrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~----~~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||||+||+++.++.+||+|||+++...... .|+..|+|||++ .+..++.++|||||||++|||++|+.|
T Consensus 149 H~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 228 (327)
T 3aln_A 149 HRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228 (327)
T ss_dssp CSCCCGGGEEEETTTEEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCC
T ss_pred ECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999998764332 688899999998 456789999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|........ .+......... .........++.++.+++.+||+.||++|||+
T Consensus 229 f~~~~~~~~------------~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 280 (327)
T 3aln_A 229 YPKWNSVFD------------QLTQVVKGDPP----------------QLSNSEEREFSPSFINFVNLCLTKDESKRPKY 280 (327)
T ss_dssp SSCC-------------------CCCCCSCCC----------------CCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCcchHHH------------HHHHHhcCCCC----------------CCCCcccccCCHHHHHHHHHHhhCChhhCcCH
Confidence 975311100 00011100000 00000111235568999999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|+++.
T Consensus 281 ~ell~h 286 (327)
T 3aln_A 281 KELLKH 286 (327)
T ss_dssp HHHTTS
T ss_pred HHHHhC
Confidence 999874
No 239
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.97 E-value=4.8e-33 Score=262.14 Aligned_cols=188 Identities=23% Similarity=0.342 Sum_probs=143.7
Q ss_pred cccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccc
Q 042634 181 HRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDL 260 (427)
Q Consensus 181 Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDl 260 (427)
||||+++++.+.. ....++||| +.+++|.+++... ..+++..++.++.|++.||+||| +.||+||||
T Consensus 87 ~~~iv~~~~~~~~-----~~~~~lv~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dl 153 (313)
T 3cek_A 87 SDKIIRLYDYEIT-----DQYIYMVME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDL 153 (313)
T ss_dssp CTTBCCEEEEEEC-----SSEEEEEEC-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCC
T ss_pred CCceEEEEEEeec-----CCEEEEEEe-cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCC
Confidence 6999999998544 457899999 5589999998754 45899999999999999999999 889999999
Q ss_pred cCCceeeCCCCceEecccccccccCCc--------CCCccccccccccCC-----------CCcCccccchhHHHHHHHH
Q 042634 261 KPSNVLLDGELTAHVGDFGLAKFLPEA--------TNNFFNFQIAEYGMG-----------SEVSTSGDVYSFGILLLET 321 (427)
Q Consensus 261 kp~NIll~~~~~~kL~DFG~a~~~~~~--------~~~~~~y~aPE~~~~-----------~~~~~~~DiwS~G~vl~el 321 (427)
||+||++++ +.+||+|||+++..... ..|+..|+|||++.+ ..++.++|||||||++|||
T Consensus 154 kp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el 232 (313)
T 3cek_A 154 KPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 232 (313)
T ss_dssp CGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHH
T ss_pred CcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHH
Confidence 999999965 89999999999875432 268899999999875 4688999999999999999
Q ss_pred HhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCC
Q 042634 322 FTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELP 401 (427)
Q Consensus 322 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP 401 (427)
++|+.||....... .. .... .++..... .+..++.++.+++.+||+.||
T Consensus 233 ~~g~~pf~~~~~~~---~~-~~~~--------~~~~~~~~-------------------~~~~~~~~l~~li~~~l~~dp 281 (313)
T 3cek_A 233 TYGKTPFQQIINQI---SK-LHAI--------IDPNHEIE-------------------FPDIPEKDLQDVLKCCLKRDP 281 (313)
T ss_dssp HHSSCTTTTCCSHH---HH-HHHH--------HCTTSCCC-------------------CCCCSCHHHHHHHHHHTCSST
T ss_pred HhCCCchhhHHHHH---HH-HHHH--------HhcccccC-------------------CcccchHHHHHHHHHHccCCc
Confidence 99999997532111 11 1111 11000000 011124568899999999999
Q ss_pred CCCCCHHHHHHH
Q 042634 402 RERMNMEEVAAQ 413 (427)
Q Consensus 402 ~~Rpt~~ev~~~ 413 (427)
++|||++|+++.
T Consensus 282 ~~Rps~~ell~h 293 (313)
T 3cek_A 282 KQRISIPELLAH 293 (313)
T ss_dssp TTSCCHHHHHTS
T ss_pred ccCcCHHHHhcC
Confidence 999999999874
No 240
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=6.9e-33 Score=257.78 Aligned_cols=192 Identities=22% Similarity=0.276 Sum_probs=149.7
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++.+.. ....++||||+++++|.+++... ..+++..+..++.|++.||+||| +.||+||
T Consensus 78 l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~ 145 (287)
T 2wei_A 78 LDHPNIMKLFEILED-----SSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMH---KHNIVHR 145 (287)
T ss_dssp CCCTTBCCEEEEEEC-----SSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred ccCCCccEEEEEEeC-----CCeEEEEEEccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 479999999998543 56789999999999998887643 45899999999999999999999 8999999
Q ss_pred cccCCceeeCCC---CceEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCc
Q 042634 259 DLKPSNVLLDGE---LTAHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 259 Dlkp~NIll~~~---~~~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~ 330 (427)
||||+||+++.+ +.+||+|||.++...... .++..|+|||++.+ .++.++|||||||++|+|++|+.||..
T Consensus 146 dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (287)
T 2wei_A 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG 224 (287)
T ss_dssp CCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCC
Confidence 999999999654 479999999998765433 46778999999875 489999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 042634 331 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEV 410 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev 410 (427)
... ......+... .... + ......++.++.+++.+||+.||++|||++|+
T Consensus 225 ~~~--~~~~~~~~~~---~~~~--~-----------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 274 (287)
T 2wei_A 225 KNE--YDILKRVETG---KYAF--D-----------------------LPQWRTISDDAKDLIRKMLTFHPSLRITATQC 274 (287)
T ss_dssp SSH--HHHHHHHHHC---CCCC--C-----------------------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCH--HHHHHHHHcC---CCCC--C-----------------------chhhhhcCHHHHHHHHHHcccChhhCcCHHHH
Confidence 311 1111111110 0000 0 00112235568999999999999999999999
Q ss_pred HHH
Q 042634 411 AAQ 413 (427)
Q Consensus 411 ~~~ 413 (427)
++.
T Consensus 275 l~h 277 (287)
T 2wei_A 275 LEH 277 (287)
T ss_dssp HHS
T ss_pred hcC
Confidence 874
No 241
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=2.9e-33 Score=261.87 Aligned_cols=197 Identities=21% Similarity=0.295 Sum_probs=145.1
Q ss_pred cccccchhhhccccccC--------CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhc
Q 042634 179 IRHRNLVKIITSCASVD--------FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHY 250 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~--------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~ 250 (427)
++||||+++++.+.... .......++||||+++|+|.+++.... ..+++..++.++.|++.||+|||
T Consensus 59 l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH-- 133 (303)
T 1zy4_A 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIH-- 133 (303)
T ss_dssp CCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHH--
T ss_pred cCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHH--
Confidence 46999999998764311 122456799999999999999997543 45788999999999999999999
Q ss_pred CCCCeeeccccCCceeeCCCCceEecccccccccCC--------------------cCCCccccccccccCCC-CcCccc
Q 042634 251 CETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPE--------------------ATNNFFNFQIAEYGMGS-EVSTSG 309 (427)
Q Consensus 251 ~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~--------------------~~~~~~~y~aPE~~~~~-~~~~~~ 309 (427)
+.||+||||||+||+++.++.+||+|||.++.... ...++..|+|||++.+. .++.++
T Consensus 134 -~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 212 (303)
T 1zy4_A 134 -SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI 212 (303)
T ss_dssp -HTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHH
T ss_pred -hCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchh
Confidence 88999999999999999999999999999986532 12578899999998764 689999
Q ss_pred cchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHH
Q 042634 310 DVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSV 389 (427)
Q Consensus 310 DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (427)
|||||||++|||++ ||..... ........ ... ... + +...+..++..+
T Consensus 213 Di~slG~il~~l~~---p~~~~~~----~~~~~~~~-----~~~-~~~------------------~-~~~~~~~~~~~~ 260 (303)
T 1zy4_A 213 DMYSLGIIFFEMIY---PFSTGME----RVNILKKL-----RSV-SIE------------------F-PPDFDDNKMKVE 260 (303)
T ss_dssp HHHHHHHHHHHHHS---CCSSHHH----HHHHHHHH-----HST-TCC------------------C-CTTCCTTTSHHH
T ss_pred hHHHHHHHHHHHHh---ccCCchh----HHHHHHhc-----ccc-ccc------------------c-CccccccchHHH
Confidence 99999999999998 5542110 00111110 000 000 0 000122345568
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 390 LGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 390 ~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
.+++.+||+.||++|||++|++++
T Consensus 261 ~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 261 KKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHhcCcccCcCHHHHhCC
Confidence 899999999999999999999863
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=2e-33 Score=265.07 Aligned_cols=193 Identities=22% Similarity=0.258 Sum_probs=140.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCC-Ceee
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCET-PIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~-~ivH 257 (427)
.+||||+++++.+.. ....++||||+ ++.+..+.... ...+++..+..++.|++.||+||| +. ||+|
T Consensus 81 ~~h~~i~~~~~~~~~-----~~~~~lv~e~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H 148 (318)
T 2dyl_A 81 HDCPYIVQCFGTFIT-----NTDVFIAMELM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLK---EKHGVIH 148 (318)
T ss_dssp TTCTTBCCEEEEEEC-----SSEEEEEECCC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCC
T ss_pred cCCCceeeEEEEEec-----CCcEEEEEecc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEe
Confidence 579999999998644 56789999999 55554444321 145899999999999999999999 64 9999
Q ss_pred ccccCCceeeCCCCceEecccccccccCCc-----CCCccccccccccC-----CCCcCccccchhHHHHHHHHHhCCCC
Q 042634 258 CDLKPSNVLLDGELTAHVGDFGLAKFLPEA-----TNNFFNFQIAEYGM-----GSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 258 rDlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~y~aPE~~~-----~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
|||||+||+++.++.+||+|||+++..... ..++..|+|||++. ...++.++|||||||++|||++|+.|
T Consensus 149 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 228 (318)
T 2dyl_A 149 RDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228 (318)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCC
Confidence 999999999999999999999999765432 26888999999984 45688999999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCH
Q 042634 328 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNM 407 (427)
Q Consensus 328 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~ 407 (427)
|.........+...... .+... . ....++.++.+++.+||+.||++|||+
T Consensus 229 f~~~~~~~~~~~~~~~~-~~~~~----~-------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~ 278 (318)
T 2dyl_A 229 YKNCKTDFEVLTKVLQE-EPPLL----P-------------------------GHMGFSGDFQSFVKDCLTKDHRKRPKY 278 (318)
T ss_dssp TTTCCSHHHHHHHHHHS-CCCCC----C-------------------------SSSCCCHHHHHHHHHHTCSCTTTSCCH
T ss_pred CCCCCccHHHHHHHhcc-CCCCC----C-------------------------ccCCCCHHHHHHHHHHccCChhHCcCH
Confidence 97532211111111110 00000 0 001134568899999999999999999
Q ss_pred HHHHHH
Q 042634 408 EEVAAQ 413 (427)
Q Consensus 408 ~ev~~~ 413 (427)
+|++++
T Consensus 279 ~~ll~h 284 (318)
T 2dyl_A 279 NKLLEH 284 (318)
T ss_dssp HHHTTS
T ss_pred HHHhhC
Confidence 999874
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=6.7e-33 Score=261.02 Aligned_cols=182 Identities=20% Similarity=0.291 Sum_probs=146.8
Q ss_pred ccccchhhhccccccCCCCCCccceeeee-ecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 180 RHRNLVKIITSCASVDFQGNDSEALVYEF-MVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
+||||+++++.+.. ....++|||| +.+++|.+++... ..+++..++.++.|++.||+||| +.||+||
T Consensus 96 ~h~~i~~~~~~~~~-----~~~~~~v~e~~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~ 163 (312)
T 2iwi_A 96 GHPGVIRLLDWFET-----QEGFMLVLERPLPAQDLFDYITEK----GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHR 163 (312)
T ss_dssp CCSSBCCEEEEC----------CEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HHTEECC
T ss_pred CCCCeeeEEEEEec-----CCeEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeec
Confidence 79999999998543 5678999999 7889999998653 45899999999999999999999 8899999
Q ss_pred cccCCceeeC-CCCceEecccccccccCCcC----CCccccccccccCCCCc-CccccchhHHHHHHHHHhCCCCCCccc
Q 042634 259 DLKPSNVLLD-GELTAHVGDFGLAKFLPEAT----NNFFNFQIAEYGMGSEV-STSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 259 Dlkp~NIll~-~~~~~kL~DFG~a~~~~~~~----~~~~~y~aPE~~~~~~~-~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
||||+||+++ .++.+||+|||.++...... .++..|+|||++.+..+ +.++|||||||++|||++|+.||...
T Consensus 164 dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~- 242 (312)
T 2iwi_A 164 DIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD- 242 (312)
T ss_dssp CCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-
T ss_pred CCChhhEEEeCCCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh-
Confidence 9999999998 88999999999998765432 68889999999877666 45899999999999999999999642
Q ss_pred CCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 042634 333 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAA 412 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~ 412 (427)
........ . .+..++.++.+++.+||+.||++|||++|+++
T Consensus 243 ------~~~~~~~~--------~-------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 243 ------QEILEAEL--------H-------------------------FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ------HHHHHTCC--------C-------------------------CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ------HHHhhhcc--------C-------------------------CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01100000 0 11123456889999999999999999999987
Q ss_pred H
Q 042634 413 Q 413 (427)
Q Consensus 413 ~ 413 (427)
+
T Consensus 284 ~ 284 (312)
T 2iwi_A 284 D 284 (312)
T ss_dssp S
T ss_pred C
Confidence 3
No 244
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97 E-value=4.8e-33 Score=262.55 Aligned_cols=215 Identities=19% Similarity=0.276 Sum_probs=150.2
Q ss_pred cccccchhhhccccccC---------CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhh
Q 042634 179 IRHRNLVKIITSCASVD---------FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHH 249 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~---------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~ 249 (427)
++||||+++++.+.... +......++||||++ |+|.+++.. ..+++..++.++.|++.||+|||
T Consensus 65 l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH- 137 (320)
T 2i6l_A 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIH- 137 (320)
T ss_dssp CCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred cCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHH-
Confidence 46999999998753211 123456799999996 699998864 34889999999999999999999
Q ss_pred cCCCCeeeccccCCceeeC-CCCceEecccccccccCCc---------CCCccccccccccCC-CCcCccccchhHHHHH
Q 042634 250 YCETPIVHCDLKPSNVLLD-GELTAHVGDFGLAKFLPEA---------TNNFFNFQIAEYGMG-SEVSTSGDVYSFGILL 318 (427)
Q Consensus 250 ~~~~~ivHrDlkp~NIll~-~~~~~kL~DFG~a~~~~~~---------~~~~~~y~aPE~~~~-~~~~~~~DiwS~G~vl 318 (427)
+.||+||||||+||+++ .++.+||+|||.++..... ..++..|+|||.+.+ ..++.++|||||||++
T Consensus 138 --~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il 215 (320)
T 2i6l_A 138 --SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 215 (320)
T ss_dssp --HTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHH
T ss_pred --hCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHH
Confidence 89999999999999997 5679999999999875421 155788999998865 6789999999999999
Q ss_pred HHHHhCCCCCCcccCCCccHHHHHHHhcccc----hhcccC---ccccccccccchhhhccccccccccchHHHHHHHHH
Q 042634 319 LETFTGKRPTNEMFTGNLTLHNFVKEALPER----LAEIVD---PVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLG 391 (427)
Q Consensus 319 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (427)
|||++|+.||.+... ......+....+.. ..+... ....... .............++.++.+
T Consensus 216 ~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 284 (320)
T 2i6l_A 216 AEMLTGKTLFAGAHE--LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDM---------TEPHKPLTQLLPGISREAVD 284 (320)
T ss_dssp HHHHHSSCSSCCSSH--HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHT---------TSCCCCHHHHSTTCCHHHHH
T ss_pred HHHHhCCCCCCCCCH--HHHHHHHHHhcCCCchhhhhhhhhcCcccccccc---------cCCCCChhHhcchhhHHHHH
Confidence 999999999976421 11111111111100 000000 0000000 00000000011234667899
Q ss_pred HHhhcCCCCCCCCCCHHHHHHH
Q 042634 392 IGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 392 l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
++.+||+.||++|||++|++++
T Consensus 285 li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 285 FLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHcCCCccccCCHHHHhCC
Confidence 9999999999999999999863
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=1.2e-31 Score=272.28 Aligned_cols=225 Identities=22% Similarity=0.203 Sum_probs=156.3
Q ss_pred cccccchhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 042634 179 IRHRNLVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVH 257 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivH 257 (427)
++||||+++++++.... +..+...++||||+++|+|.+++...... ..+++..++.++.|++.||+||| +.||+|
T Consensus 69 L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~-~~lse~~i~~I~~QLl~aL~yLH---s~gIVH 144 (676)
T 3qa8_A 69 LNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENC-CGLKEGPIRTLLSDISSALRYLH---ENRIIH 144 (676)
T ss_dssp CCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCT-TCCCSSHHHHHHHHHHHHHHHHH---HTTBCC
T ss_pred CCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCCcc
Confidence 46999999998865422 23356789999999999999998764321 35889999999999999999999 899999
Q ss_pred ccccCCceeeCCCCc---eEecccccccccCCcC-----CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCC
Q 042634 258 CDLKPSNVLLDGELT---AHVGDFGLAKFLPEAT-----NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 258 rDlkp~NIll~~~~~---~kL~DFG~a~~~~~~~-----~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
|||||+||+++.++. +||+|||.++...... .|+..|+|||++.+..++.++|||||||++|||++|..||.
T Consensus 145 rDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~ 224 (676)
T 3qa8_A 145 RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224 (676)
T ss_dssp CCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 999999999986654 9999999998765432 78899999999999999999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhcccchhc-ccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 042634 330 EMFTGNLTLHNFVKEALPERLAE-IVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNME 408 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ 408 (427)
+... ...+........... .......... . .. .....+.......+..+.+++.+||++||++|||++
T Consensus 225 ~~~~----~~~~~~~i~~~~~~~~~~~~~l~g~~---~---~~-~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~ 293 (676)
T 3qa8_A 225 PNWQ----PVQWHGKVREKSNEHIVVYDDLTGAV---K---FS-SVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDP 293 (676)
T ss_dssp SSCH----HHHSSTTCC------CCSCCCCSSSC---C---CC-SSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCT
T ss_pred cccc----hhhhhhhhhcccchhhhhhhhhcccc---c---cc-cccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHH
Confidence 5311 000000000000000 0000000000 0 00 000011112334677899999999999999999998
Q ss_pred HH-----HHHHHHHH
Q 042634 409 EV-----AAQLLSFR 418 (427)
Q Consensus 409 ev-----~~~L~~~~ 418 (427)
|+ .+.++.+.
T Consensus 294 elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 294 QNPNVGCFQALDSIL 308 (676)
T ss_dssp TCCCCTTHHHHHHHH
T ss_pred HHhcCHHHHHHHHHH
Confidence 84 45554443
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=7.4e-32 Score=280.02 Aligned_cols=192 Identities=23% Similarity=0.307 Sum_probs=150.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++......+....++||||+++++|.+++.. .+++.+++.++.||+.||+||| ++||+||
T Consensus 136 l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH---~~giiHr 206 (681)
T 2pzi_A 136 VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLH---SIGLVYN 206 (681)
T ss_dssp CCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred cCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HCCCeec
Confidence 579999999998765332222236999999999999987754 4899999999999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc--CCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCc
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA--TNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNL 336 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~ 336 (427)
||||+|||++.+ .+||+|||+++..... ..||+.|+|||++.+.. +.++|||||||++|||++|..||.+......
T Consensus 207 Dlkp~NIll~~~-~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~ 284 (681)
T 2pzi_A 207 DLKPENIMLTEE-QLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL 284 (681)
T ss_dssp CCSGGGEEECSS-CEEECCCTTCEETTCCSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC
T ss_pred ccChHHeEEeCC-cEEEEecccchhcccCCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc
Confidence 999999999886 8999999999876543 37899999999987654 8999999999999999999988764211100
Q ss_pred cHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHH
Q 042634 337 TLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERM-NMEEVAAQLL 415 (427)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rp-t~~ev~~~L~ 415 (427)
+ . .......+..+.+++.+||+.||++|| +++++...|.
T Consensus 285 ----------~-------~-----------------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 285 ----------P-------E-----------------------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp ----------C-------T-----------------------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred ----------c-------c-----------------------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 0 0 001222446788999999999999999 5777888887
Q ss_pred HHHHHH
Q 042634 416 SFRNKL 421 (427)
Q Consensus 416 ~~~~~~ 421 (427)
.+..+.
T Consensus 325 ~~~~~~ 330 (681)
T 2pzi_A 325 GVLREV 330 (681)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 775543
No 247
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=1.1e-31 Score=251.21 Aligned_cols=187 Identities=20% Similarity=0.296 Sum_probs=140.2
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.+||||+++++.+... ..+....++||||+++|+|.+++..... ..+++..++.++.|++.||+||| +.||+||
T Consensus 68 ~~h~~i~~~~~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~ 141 (299)
T 3m2w_A 68 SQCPHIVRIVDVYENL-YAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLH---SINIAHR 141 (299)
T ss_dssp TTSTTBCCEEEEEEEE-ETTEEEEEEEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred ccCCCchhHHhhhhhh-cCCCceEEEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 5799999999986542 2234567999999999999999976432 45899999999999999999999 8999999
Q ss_pred cccCCceeeCC---CCceEecccccccccCCcCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCC
Q 042634 259 DLKPSNVLLDG---ELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGN 335 (427)
Q Consensus 259 Dlkp~NIll~~---~~~~kL~DFG~a~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~ 335 (427)
||||+||+++. ++.+||+|||+|+... +..++.++||||+||++|||++|+.||.......
T Consensus 142 dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~----------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~ 205 (299)
T 3m2w_A 142 DVKPENLLYTSKRPNAILKLTDFGFAKETT----------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 205 (299)
T ss_dssp CCSGGGEEESSSSTTCCEEECCCTTCEECT----------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----
T ss_pred CCCHHHEEEecCCCCCcEEEeccccccccc----------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh
Confidence 99999999988 7899999999986542 3567889999999999999999999997532110
Q ss_pred ccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 042634 336 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ 413 (427)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~ 413 (427)
. .......+. .... ..+......++.++.+++.+||+.||++|||++|++++
T Consensus 206 ~----------~~~~~~~~~---~~~~-------------~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 206 I----------SPGMKTRIR---MGQY-------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp ------------CCSCCSSC---TTCC-------------SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred h----------hHHHHHHHh---hccc-------------cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 000000000 0000 00000112346778999999999999999999999874
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=1.7e-31 Score=261.21 Aligned_cols=177 Identities=16% Similarity=0.140 Sum_probs=135.8
Q ss_pred ccceeeeeecCCCcccccccc---hhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecc
Q 042634 201 SEALVYEFMVNGSLEEWLHPN---REALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGD 277 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~D 277 (427)
..+++|+++ +++|.++++.. ......+++..++.++.|++.||+||| ++||+||||||+|||++.++.+||+|
T Consensus 179 ~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iiHrDiKp~NILl~~~~~~kL~D 254 (413)
T 3dzo_A 179 SRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTG 254 (413)
T ss_dssp SEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECC
T ss_pred ceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcccceEEEecCCeEEEEe
Confidence 346677765 78999888421 111245888999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCc---CCCcccccccccc----------CCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccHHHHHHH
Q 042634 278 FGLAKFLPEA---TNNFFNFQIAEYG----------MGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTLHNFVKE 344 (427)
Q Consensus 278 FG~a~~~~~~---~~~~~~y~aPE~~----------~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~~~~~~~ 344 (427)
||+++..... ..| +.|+|||++ ....++.++|||||||++|||++|+.||........
T Consensus 255 FG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~-------- 325 (413)
T 3dzo_A 255 FEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG-------- 325 (413)
T ss_dssp GGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC--------
T ss_pred ccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhh--------
Confidence 9999876543 366 899999999 556689999999999999999999999975321100
Q ss_pred hcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--HHHHHHH
Q 042634 345 ALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQ--LLSFRNK 420 (427)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~--L~~~~~~ 420 (427)
...+... ...++.++.+++.+||+.||++|||+.|+++. ++++.+.
T Consensus 326 -----~~~~~~~-------------------------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~~~ 373 (413)
T 3dzo_A 326 -----SEWIFRS-------------------------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTE 373 (413)
T ss_dssp -----SGGGGSS-------------------------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHH
T ss_pred -----HHHHHhh-------------------------cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHHHH
Confidence 0000000 00124568999999999999999999998764 4444443
No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.96 E-value=1.1e-30 Score=242.65 Aligned_cols=179 Identities=11% Similarity=0.071 Sum_probs=136.6
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||+++++++.. +...++||||+++++|.++++.. ....++..++.|++.||+||| ++||+||
T Consensus 88 l~hp~iv~~~~~~~~-----~~~~~lv~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH---~~givH~ 153 (286)
T 3uqc_A 88 IDKPGVARVLDVVHT-----RAGGLVVAEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAH---RAGVALS 153 (286)
T ss_dssp CCCTTBCCEEEEEEE-----TTEEEEEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHH---HTTCCCC
T ss_pred CCCCCcceeeEEEEE-----CCcEEEEEEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHH---HCCCccC
Confidence 579999999998644 56789999999999999998543 355678899999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcCCCccccccccccCCCCcCccccchhHHHHHHHHHhCCCCCCcccCCCccH
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRPTNEMFTGNLTL 338 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~pf~~~~~~~~~~ 338 (427)
||||+|||++.++.+||+++|. ++ .++.++|||||||++|||++|+.||.+........
T Consensus 154 Dikp~NIll~~~g~~kl~~~~~--------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~ 212 (286)
T 3uqc_A 154 IDHPSRVRVSIDGDVVLAYPAT--------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA 212 (286)
T ss_dssp CCSGGGEEEETTSCEEECSCCC--------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE
T ss_pred CCCcccEEEcCCCCEEEEeccc--------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH
Confidence 9999999999999999996653 33 37899999999999999999999998642211000
Q ss_pred HHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 042634 339 HNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSVLGIGVTCSSELPRERMNMEEVAAQLLSFR 418 (427)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dP~~Rpt~~ev~~~L~~~~ 418 (427)
.....+..... ........++.++.+++.+||+.||++| |++|+++.|+++.
T Consensus 213 ----------~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 213 ----------PAERDTAGQPI-----------------EPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQAT 264 (286)
T ss_dssp ----------ECCBCTTSCBC-----------------CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred ----------HHHHHhccCCC-----------------ChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence 00000000000 0000112345678999999999999999 9999999999986
Q ss_pred HH
Q 042634 419 NK 420 (427)
Q Consensus 419 ~~ 420 (427)
..
T Consensus 265 ~~ 266 (286)
T 3uqc_A 265 AV 266 (286)
T ss_dssp C-
T ss_pred cc
Confidence 43
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.96 E-value=1.4e-30 Score=247.90 Aligned_cols=193 Identities=16% Similarity=0.117 Sum_probs=143.0
Q ss_pred ccccchhhhcccccc--------CCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC
Q 042634 180 RHRNLVKIITSCASV--------DFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC 251 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~--------~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~ 251 (427)
.||||+++++.+... ++.+....++|||||++|++.+.+.+ ..+++..++.++.||+.||+|||+
T Consensus 107 ~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~aL~~lH~-- 179 (336)
T 2vuw_A 107 YPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTASLAVAEA-- 179 (336)
T ss_dssp CCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHHHHHHHHH--
T ss_pred CcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH--
Confidence 389999988876541 12235678999999999987776643 348999999999999999999993
Q ss_pred CCCeeeccccCCceeeCCCC--------------------ceEecccccccccCCcC-CCccccccccccCCCCcCcccc
Q 042634 252 ETPIVHCDLKPSNVLLDGEL--------------------TAHVGDFGLAKFLPEAT-NNFFNFQIAEYGMGSEVSTSGD 310 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~--------------------~~kL~DFG~a~~~~~~~-~~~~~y~aPE~~~~~~~~~~~D 310 (427)
+.||+||||||+|||++.++ .+||+|||+|+...... .||+.|+|||++.+.. +.++|
T Consensus 180 ~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~-~~~~D 258 (336)
T 2vuw_A 180 SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG-DYQFD 258 (336)
T ss_dssp HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-SHHHH
T ss_pred hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-cccee
Confidence 37899999999999998876 89999999999765443 7899999999998776 89999
Q ss_pred chhHHHH-HHHHHhCCCCCCcccCCCccHHHHHHHhcccchhcccCccccccccccchhhhccccccccccchHHHHHHH
Q 042634 311 VYSFGIL-LLETFTGKRPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSKANAHKQFTRSFSVKECLVSV 389 (427)
Q Consensus 311 iwS~G~v-l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (427)
|||+|++ .+++++|..||.... +....... +..... .. ...........+.++
T Consensus 259 iwsl~~~~~~~~~~g~~p~~~~~-----~~~~~~~~----~~~~~~---~~--------------~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 259 IYRLMKKENNNRWGEYHPYSNVL-----WLHYLTDK----MLKQMT---FK--------------TKCNTPAMKQIKRKI 312 (336)
T ss_dssp HHHHHHHHHTTCTTSCCTHHHHH-----HHHHHHHH----HHHTCC---CS--------------SCCCSHHHHHHHHHH
T ss_pred hhhhhCCCCcccccccCCCcchh-----hhhHHHHh----hhhhhc---cC--------------cccchhhhhhcCHHH
Confidence 9998777 777888999985310 00000000 000000 00 000011345678899
Q ss_pred HHHHhhcCCCCCCCCCCHHHHH
Q 042634 390 LGIGVTCSSELPRERMNMEEVA 411 (427)
Q Consensus 390 ~~l~~~cl~~dP~~Rpt~~ev~ 411 (427)
.+++.+||+.| |++|++
T Consensus 313 ~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHhccC-----CHHHHH
Confidence 99999999976 999988
No 251
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.95 E-value=1.1e-27 Score=252.01 Aligned_cols=178 Identities=35% Similarity=0.622 Sum_probs=142.2
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|+++|.+|..+..+++|++|+|++|++++.+|.+++.+++|++|+|++|.++|.+|..++.+++|++|++++|++
T Consensus 471 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred EEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCcc
Confidence 67777888777787788888888888888888777787888888888888888888888888888888888888888888
Q ss_pred cccCCCCccc----------------------------------------------------------------------
Q 042634 82 TGTTPTEVIG---------------------------------------------------------------------- 91 (427)
Q Consensus 82 ~~~~p~~~~~---------------------------------------------------------------------- 91 (427)
+|.+|..+..
T Consensus 551 ~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~ 630 (768)
T 3rgz_A 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630 (768)
T ss_dssp ESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSS
T ss_pred CCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhc
Confidence 7777754432
Q ss_pred cccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCcee
Q 042634 92 LSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENL 171 (427)
Q Consensus 92 l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L 171 (427)
+.+| +.|+|++|+++|.+|.+++++++|+.|+|++|+++|.+|..++++++|+.|++++|+++|.+|..+..++.|+.|
T Consensus 631 l~~L-~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 631 NGSM-MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SBCC-CEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred cccc-cEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 2345 468888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred eccCCcccc
Q 042634 172 DLSRNNFIR 180 (427)
Q Consensus 172 ~L~~N~ll~ 180 (427)
++++|++..
T Consensus 710 ~ls~N~l~g 718 (768)
T 3rgz_A 710 DLSNNNLSG 718 (768)
T ss_dssp ECCSSEEEE
T ss_pred ECcCCcccc
Confidence 888887754
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.95 E-value=1.8e-27 Score=223.97 Aligned_cols=178 Identities=28% Similarity=0.497 Sum_probs=169.3
Q ss_pred CeeecCCcccc--cCCccccCCCCCCEeeeec-ccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEcc
Q 042634 1 AFTLVGNQFTG--RIPGSIGDLHKLQRLTLEM-NKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLS 77 (427)
Q Consensus 1 ~l~l~~n~l~~--~~p~~~~~l~~L~~L~l~~-n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~ 77 (427)
+|+|++|.++| .+|..++.+++|++|+|++ |.+++.+|..|+++++|++|+|++|.+++.+|..+..+++|++|+++
T Consensus 54 ~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls 133 (313)
T 1ogq_A 54 NLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFS 133 (313)
T ss_dssp EEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECC
T ss_pred EEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCC
Confidence 37999999999 8999999999999999995 99999999999999999999999999999999999999999999999
Q ss_pred CccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCC-CCCeEECcCCcccccCCccccccccccceeeeeeeccc
Q 042634 78 NNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILK-NLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRG 156 (427)
Q Consensus 78 ~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~-~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~ 156 (427)
+|.+++.+|..+..+++| ++|++++|++++.+|..++.++ +|+.|++++|++++.+|..++.+. |+.|++++|.+++
T Consensus 134 ~N~l~~~~p~~~~~l~~L-~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~ 211 (313)
T 1ogq_A 134 YNALSGTLPPSISSLPNL-VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEG 211 (313)
T ss_dssp SSEEESCCCGGGGGCTTC-CEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEE
T ss_pred CCccCCcCChHHhcCCCC-CeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccC
Confidence 999999999999999999 6899999999999999999998 999999999999999999999987 9999999999999
Q ss_pred cCCCCcccccCCceeeccCCcccc
Q 042634 157 NIPSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 157 ~~p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
.+|..+..+++|+.|++++|.+..
T Consensus 212 ~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 212 DASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCGGGCCTTSCCSEEECCSSEECC
T ss_pred cCCHHHhcCCCCCEEECCCCceee
Confidence 999999999999999999998864
No 253
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=5.2e-27 Score=220.85 Aligned_cols=195 Identities=25% Similarity=0.416 Sum_probs=168.6
Q ss_pred CeeecC-CcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCc
Q 042634 1 AFTLVG-NQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 1 ~l~l~~-n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
+|+|++ |.+++.+|..++.+++|++|+|++|++++.+|..|+++++|++|+|++|.+++.+|..+..+++|++|++++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 378995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCccccc-cccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccC
Q 042634 80 NLTGTTPTEVIGLS-SLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158 (427)
Q Consensus 80 ~~~~~~p~~~~~l~-~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~ 158 (427)
++++.+|..+..+. +| ++|++++|++++.+|..+..++ |+.|++++|.+++.+|..++.+++|+.|++++|.+++.+
T Consensus 160 ~l~~~~p~~l~~l~~~L-~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLF-TSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp CCEEECCGGGGCCCTTC-CEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred cccCcCCHHHhhhhhcC-cEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 99999999999988 77 6899999999999999999987 999999999999888889999999999999999998766
Q ss_pred CCCcccccCCceeeccCCccc-ccccchhhhccccccCCCC
Q 042634 159 PSSLSSLRGIENLDLSRNNFI-RHRNLVKIITSCASVDFQG 198 (427)
Q Consensus 159 p~~l~~l~~L~~L~L~~N~ll-~Hpniv~~~~~~~~~~~~~ 198 (427)
|. +..+++|+.|++++|.+. ..|..+.-+.....++..+
T Consensus 238 ~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 277 (313)
T 1ogq_A 238 GK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSF 277 (313)
T ss_dssp GG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCS
T ss_pred Cc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcC
Confidence 55 778889999999999886 4444433333333333333
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.94 E-value=1.8e-26 Score=242.86 Aligned_cols=177 Identities=38% Similarity=0.570 Sum_probs=113.8
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|.++|.+|..++.+++|+.|+|++|++++.+|..++++++|++|+|++|+++|.+|.+++.+++|++|++++|++
T Consensus 447 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 526 (768)
T 3rgz_A 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcc
Confidence 45555555555566666666666666666666655666666666666666666666666666666666666666666666
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCC-----------------------------------------------
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNF----------------------------------------------- 114 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~----------------------------------------------- 114 (427)
+|.+|..+..+++| +.|++++|+++|.+|..+
T Consensus 527 ~~~~p~~l~~l~~L-~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (768)
T 3rgz_A 527 SGNIPAELGDCRSL-IWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLN 605 (768)
T ss_dssp EEECCGGGGGCTTC-CEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGG
T ss_pred cCcCCHHHcCCCCC-CEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhh
Confidence 66666666666666 456666666665555432
Q ss_pred -----------------------cCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCcee
Q 042634 115 -----------------------GILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENL 171 (427)
Q Consensus 115 -----------------------~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L 171 (427)
+.+++|+.||+++|+++|.+|.+++++++|+.|++++|.++|.+|..++.+++|+.|
T Consensus 606 ~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L 685 (768)
T 3rgz_A 606 RLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 685 (768)
T ss_dssp GGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred ccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEE
Confidence 234556666777777777777777777777777777777777777777777777777
Q ss_pred eccCCccc
Q 042634 172 DLSRNNFI 179 (427)
Q Consensus 172 ~L~~N~ll 179 (427)
++++|++.
T Consensus 686 dLs~N~l~ 693 (768)
T 3rgz_A 686 DLSSNKLD 693 (768)
T ss_dssp ECCSSCCE
T ss_pred ECCCCccc
Confidence 77777665
No 255
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=3.4e-28 Score=246.17 Aligned_cols=133 Identities=19% Similarity=0.132 Sum_probs=98.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
..|+||+++++++ .++...||||||++|++|.+++... .++++. .|+.||+.||+|+| ++|||||
T Consensus 299 ~~~~~i~~~~~~~-----ed~~~~yLVMEyv~G~~L~d~i~~~----~~l~~~---~I~~QIl~AL~ylH---~~GIIHR 363 (569)
T 4azs_A 299 PAGFDAPAVLAHG-----ENAQSGWLVMEKLPGRLLSDMLAAG----EEIDRE---KILGSLLRSLAALE---KQGFWHD 363 (569)
T ss_dssp CTTCCCCCEEEEE-----ECSSEEEEEEECCCSEEHHHHHHTT----CCCCHH---HHHHHHHHHHHHHH---HTTCEES
T ss_pred CCCCCeeEEEEEE-----EECCEEEEEEecCCCCcHHHHHHhC----CCCCHH---HHHHHHHHHHHHHH---HCCceec
Confidence 4799999999984 4477899999999999999999765 346654 58999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCcC------CCccccccccccCCCCcCccccchhHHHHHHHHHhCCCC
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEAT------NNFFNFQIAEYGMGSEVSTSGDVYSFGILLLETFTGKRP 327 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g~~p 327 (427)
||||+|||++.++.+||+|||+|+...... .||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus 364 DIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 364 DVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp CCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred cCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 999999999999999999999998765432 68899999999875 467789999999998887665444
No 256
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.93 E-value=7e-26 Score=214.44 Aligned_cols=174 Identities=24% Similarity=0.325 Sum_probs=143.7
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|+++ .+|+.++.+++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++.+++|++|++++|+
T Consensus 85 ~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~ 161 (328)
T 4fcg_A 85 ALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACP 161 (328)
T ss_dssp EEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEET
T ss_pred EEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCC
Confidence 3788888888 77888888888888888888888 78888888888888888888888 888888888888888888888
Q ss_pred CcccCCCCccc---------cccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeee
Q 042634 81 LTGTTPTEVIG---------LSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNG 151 (427)
Q Consensus 81 ~~~~~p~~~~~---------l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~ 151 (427)
+.+.+|..+.. +++| ++|+|++|.++ .+|..++.+++|+.|++++|+++ .+|..++.+++|+.|++++
T Consensus 162 ~~~~~p~~~~~~~~~~~~~~l~~L-~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~ 238 (328)
T 4fcg_A 162 ELTELPEPLASTDASGEHQGLVNL-QSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRG 238 (328)
T ss_dssp TCCCCCSCSEEEC-CCCEEESTTC-CEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTT
T ss_pred CccccChhHhhccchhhhccCCCC-CEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcC
Confidence 88888877654 7777 57888888887 78888888888888888888888 4777788888888888888
Q ss_pred eeccccCCCCcccccCCceeeccCCcccc
Q 042634 152 NFFRGNIPSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 152 n~l~~~~p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
|.+.+.+|..+..+++|+.|++++|.+..
T Consensus 239 n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 267 (328)
T 4fcg_A 239 CTALRNYPPIFGGRAPLKRLILKDCSNLL 267 (328)
T ss_dssp CTTCCBCCCCTTCCCCCCEEECTTCTTCC
T ss_pred CcchhhhHHHhcCCCCCCEEECCCCCchh
Confidence 88888888888888888888888876643
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.92 E-value=3.1e-25 Score=209.97 Aligned_cols=175 Identities=22% Similarity=0.309 Sum_probs=165.5
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccC---------CCCC
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGK---------CQNL 71 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~---------l~~L 71 (427)
+|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|++++|++.+.+|..++. +++|
T Consensus 108 ~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L 185 (328)
T 4fcg_A 108 HMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNL 185 (328)
T ss_dssp EEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTC
T ss_pred EEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCC
Confidence 4899999999 89999999999999999999999 89999999999999999999999899998875 9999
Q ss_pred CeEEccCccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeee
Q 042634 72 ILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNG 151 (427)
Q Consensus 72 ~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~ 151 (427)
++|++++|+++ .+|..+.++++| ++|+|++|+++ .+|..++.+++|+.|++++|.+.+.+|..++.+++|+.|++++
T Consensus 186 ~~L~L~~n~l~-~lp~~l~~l~~L-~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~ 262 (328)
T 4fcg_A 186 QSLRLEWTGIR-SLPASIANLQNL-KSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKD 262 (328)
T ss_dssp CEEEEEEECCC-CCCGGGGGCTTC-CEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTT
T ss_pred CEEECcCCCcC-cchHhhcCCCCC-CEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCC
Confidence 99999999999 889899999999 68999999998 5888899999999999999999999999999999999999999
Q ss_pred eeccccCCCCcccccCCceeeccCCcccc
Q 042634 152 NFFRGNIPSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 152 n~l~~~~p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
|.+.+.+|..+..+++|+.|++++|++..
T Consensus 263 n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 263 CSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp CTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred CCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 99999999999999999999999988755
No 258
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.92 E-value=4e-25 Score=205.10 Aligned_cols=181 Identities=24% Similarity=0.252 Sum_probs=156.0
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeecccc-CcccCCcCccCCCCCCeEEccCc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENM-LEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
+|+|++|.+++..+..+..+++|++|+|++|.+++..|..|+++++|++|++++|. +++..|..+..+++|++|++++|
T Consensus 36 ~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n 115 (285)
T 1ozn_A 36 RIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRC 115 (285)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTS
T ss_pred EEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCC
Confidence 37899999997777789999999999999999997668889999999999999997 77444778889999999999999
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCC
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p 159 (427)
.+++..|..+.++++| ++|++++|++++..+..++.+++|+.|++++|++++..+..+..+++|+.|++++|.+++..|
T Consensus 116 ~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 194 (285)
T 1ozn_A 116 GLQELGPGLFRGLAAL-QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194 (285)
T ss_dssp CCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred cCCEECHhHhhCCcCC-CEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCH
Confidence 9998778888889999 679999999986666678899999999999999986555578889999999999999998888
Q ss_pred CCcccccCCceeeccCCcccccc
Q 042634 160 SSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
..+..+++|+.|++++|.+..-+
T Consensus 195 ~~~~~l~~L~~L~l~~n~l~~~~ 217 (285)
T 1ozn_A 195 HAFRDLGRLMTLYLFANNLSALP 217 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCC
T ss_pred hHccCcccccEeeCCCCcCCcCC
Confidence 88999999999999998886543
No 259
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.92 E-value=2.2e-24 Score=200.17 Aligned_cols=176 Identities=22% Similarity=0.216 Sum_probs=153.3
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc-
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN- 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~- 80 (427)
++.+++.++ .+|..+ .++|+.|+|++|.+++..+..|+.+++|++|++++|.+++..|..+..+++|++|++++|.
T Consensus 16 ~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~ 92 (285)
T 1ozn_A 16 TSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (285)
T ss_dssp EECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred EEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCC
Confidence 678888898 667654 5799999999999996555679999999999999999997778889999999999999997
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
++...|..+.++++| ++|++++|.+++..|..+.++++|+.|++++|++++..+..++.+++|+.|++++|.+++..+.
T Consensus 93 l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 171 (285)
T 1ozn_A 93 LRSVDPATFHGLGRL-HTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (285)
T ss_dssp CCCCCTTTTTTCTTC-CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred ccccCHHHhcCCcCC-CEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHH
Confidence 776668888999999 6899999999987788899999999999999999965556788999999999999999987777
Q ss_pred CcccccCCceeeccCCccccc
Q 042634 161 SLSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~H 181 (427)
.+..+++|+.|++++|.+..-
T Consensus 172 ~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 172 AFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEE
T ss_pred HhcCccccCEEECCCCccccc
Confidence 799999999999999987553
No 260
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.92 E-value=2.1e-25 Score=229.78 Aligned_cols=144 Identities=19% Similarity=0.269 Sum_probs=95.1
Q ss_pred cceeecCcchhccccCCEeeeccccCccc-----------------CCcCcc--CCCCCCeEEccCccCcccCCCCcccc
Q 042634 32 KFWGEIPSSIGNLTLLITLNFAENMLEGS-----------------IPSSLG--KCQNLILLDLSNNNLTGTTPTEVIGL 92 (427)
Q Consensus 32 ~~~~~~p~~~~~l~~L~~L~l~~n~l~~~-----------------~p~~~~--~l~~L~~l~l~~N~~~~~~p~~~~~l 92 (427)
+++| +|.+|+++++|++|+|++|.++|. +|..++ ++++|++|++++|.+.+.+|..++++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4444 677777777777777777777764 777777 77777777777777777777777777
Q ss_pred ccccceeeccCCc-CcC-CCCCCCcCC------CCCCeEECcCCcccccCCc--cccccccccceeeeeeeccccCCCCc
Q 042634 93 SSLSIYLDLSQNQ-LNG-PLPSNFGIL------KNLGAIDISENKLSGQIPS--SIGSCIRLEQLVMNGNFFRGNIPSSL 162 (427)
Q Consensus 93 ~~l~~~L~l~~n~-~~~-~~p~~~~~l------~~L~~l~l~~n~~~~~~p~--~~~~~~~l~~l~l~~n~l~~~~p~~l 162 (427)
++| ++|++++|+ ++| .+|..++.+ ++|+.|++++|+++ .+|. .++.+++|+.|++++|.++|.+| .+
T Consensus 273 ~~L-~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 273 PEM-QLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp SSC-CEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC
T ss_pred CCC-CEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh
Confidence 777 567777776 666 566655554 66666666666666 5665 56666666666666666665555 55
Q ss_pred ccccCCceeeccCCccc
Q 042634 163 SSLRGIENLDLSRNNFI 179 (427)
Q Consensus 163 ~~l~~L~~L~L~~N~ll 179 (427)
..+++|+.|++++|.+.
T Consensus 350 ~~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 350 GSEIKLASLNLAYNQIT 366 (636)
T ss_dssp EEEEEESEEECCSSEEE
T ss_pred CCCCCCCEEECCCCccc
Confidence 55555555555555543
No 261
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=3.5e-24 Score=194.97 Aligned_cols=176 Identities=21% Similarity=0.229 Sum_probs=158.8
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
+++++|.++ .+|..+. ++|+.|+|++|.+++..|..|+++++|++|+|++|.+++..|..+..+++|++|++++|++
T Consensus 19 l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 95 (251)
T 3m19_A 19 VDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL 95 (251)
T ss_dssp EECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcc
Confidence 789999999 7787766 6999999999999977777899999999999999999977777799999999999999999
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~ 161 (427)
++..+..+.++++| ++|+|++|++++..+..+..+++|+.|++++|++++..|..++.+++|+.|++++|.+++..+..
T Consensus 96 ~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 174 (251)
T 3m19_A 96 ASLPLGVFDHLTQL-DKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGA 174 (251)
T ss_dssp CCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cccChhHhcccCCC-CEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHH
Confidence 97777888999999 68999999999666667899999999999999999655558999999999999999999888888
Q ss_pred cccccCCceeeccCCccccc
Q 042634 162 LSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 162 l~~l~~L~~L~L~~N~ll~H 181 (427)
+..+++|+.+++++|.+...
T Consensus 175 ~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 175 FDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTCTTCCEEECCSCCBCTT
T ss_pred HhCCCCCCEEEeeCCceeCC
Confidence 99999999999999998554
No 262
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=9.4e-24 Score=194.30 Aligned_cols=176 Identities=23% Similarity=0.295 Sum_probs=142.5
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcC-ccCCCCCCeEEccCcc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSS-LGKCQNLILLDLSNNN 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~l~l~~N~ 80 (427)
+++++|+++ .+|..+. ++|+.|+|++|++++..+..|+++++|++|+|++|.++ .+|.. +..+++|++|++++|+
T Consensus 21 l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~ 96 (270)
T 2o6q_A 21 VDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNK 96 (270)
T ss_dssp EECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSC
T ss_pred EEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCc
Confidence 688888888 5776554 67899999999988544457888999999999999988 55554 5778889999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+++..+..+.++.+| ++|++++|++++..|..++.+++|+.|++++|.+++..+..++.+++|+.|++++|.+++..+.
T Consensus 97 l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 175 (270)
T 2o6q_A 97 LQALPIGVFDQLVNL-AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG 175 (270)
T ss_dssp CCCCCTTTTTTCSSC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCcCCHhHcccccCC-CEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChh
Confidence 986666777888888 6799999999877677788899999999999988854445578888999999999988887777
Q ss_pred CcccccCCceeeccCCcccccc
Q 042634 161 SLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
.+..+++|+.|++++|.+..-+
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 176 AFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCCC
T ss_pred HhccCCCcCEEECCCCcCCcCC
Confidence 7888888999999888876543
No 263
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.8e-23 Score=194.27 Aligned_cols=175 Identities=23% Similarity=0.242 Sum_probs=150.6
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
+++++|+++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|.++ .+|.. +.+++|++|++++|++
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~-~~l~~L~~L~Ls~N~l 89 (290)
T 1p9a_G 15 VNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD-GTLPVLGTLDLSHNQL 89 (290)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC-SCCTTCCEEECCSSCC
T ss_pred EECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccC-cccCC-CCCCcCCEEECCCCcC
Confidence 688999999 6787664 68999999999999777788999999999999999999 55544 7889999999999999
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~ 161 (427)
+ .+|..+.++++| ++|++++|++++..|..|..+++|+.|++++|++++..+..+..+++|+.|++++|++++..+..
T Consensus 90 ~-~l~~~~~~l~~L-~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~ 167 (290)
T 1p9a_G 90 Q-SLPLLGQTLPAL-TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGL 167 (290)
T ss_dssp S-SCCCCTTTCTTC-CEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTT
T ss_pred C-cCchhhccCCCC-CEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHH
Confidence 8 788888889999 68999999998666688999999999999999999655566788999999999999999766667
Q ss_pred cccccCCceeeccCCccccccc
Q 042634 162 LSSLRGIENLDLSRNNFIRHRN 183 (427)
Q Consensus 162 l~~l~~L~~L~L~~N~ll~Hpn 183 (427)
+..+++|+.|++++|.+..-|.
T Consensus 168 ~~~l~~L~~L~L~~N~l~~ip~ 189 (290)
T 1p9a_G 168 LNGLENLDTLLLQENSLYTIPK 189 (290)
T ss_dssp TTTCTTCCEEECCSSCCCCCCT
T ss_pred hcCcCCCCEEECCCCcCCccCh
Confidence 7889999999999998875443
No 264
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=1.3e-24 Score=228.70 Aligned_cols=139 Identities=21% Similarity=0.274 Sum_probs=93.7
Q ss_pred cCcchhccccCCEeeeccccCcc-----------------cCCcCcc--CCCCCCeEEccCccCcccCCCCccccccccc
Q 042634 37 IPSSIGNLTLLITLNFAENMLEG-----------------SIPSSLG--KCQNLILLDLSNNNLTGTTPTEVIGLSSLSI 97 (427)
Q Consensus 37 ~p~~~~~l~~L~~L~l~~n~l~~-----------------~~p~~~~--~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~ 97 (427)
+|.+|+++++|++|+|++|.++| .+|..++ .+++|++|+|++|.+.+.+|..+.++++| +
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L-~ 518 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPEL-Q 518 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSC-C
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCC-C
Confidence 67777777777777777777776 2777776 77777777777777777777777777777 5
Q ss_pred eeeccCCc-CcC-CCCCCCcCCC-------CCCeEECcCCcccccCCc--cccccccccceeeeeeeccccCCCCccccc
Q 042634 98 YLDLSQNQ-LNG-PLPSNFGILK-------NLGAIDISENKLSGQIPS--SIGSCIRLEQLVMNGNFFRGNIPSSLSSLR 166 (427)
Q Consensus 98 ~L~l~~n~-~~~-~~p~~~~~l~-------~L~~l~l~~n~~~~~~p~--~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~ 166 (427)
.|+|++|+ ++| .+|..++.++ +|+.|++++|.++ .+|. .++++++|+.|++++|.++ .+| .+..++
T Consensus 519 ~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~ 595 (876)
T 4ecn_A 519 SLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNV 595 (876)
T ss_dssp EEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTS
T ss_pred EEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCC
Confidence 67777776 666 5665544443 6666666666666 5666 5666666666666666665 445 555555
Q ss_pred CCceeeccCCccc
Q 042634 167 GIENLDLSRNNFI 179 (427)
Q Consensus 167 ~L~~L~L~~N~ll 179 (427)
+|+.|++++|.+.
T Consensus 596 ~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 596 KLTDLKLDYNQIE 608 (876)
T ss_dssp EESEEECCSSCCS
T ss_pred cceEEECcCCccc
Confidence 5666666555554
No 265
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.90 E-value=2.2e-24 Score=222.12 Aligned_cols=174 Identities=22% Similarity=0.370 Sum_probs=163.2
Q ss_pred CCcccccCCccccCCCCCCEeeeecccceee-----------------cCcchh--ccccCCEeeeccccCcccCCcCcc
Q 042634 6 GNQFTGRIPGSIGDLHKLQRLTLEMNKFWGE-----------------IPSSIG--NLTLLITLNFAENMLEGSIPSSLG 66 (427)
Q Consensus 6 ~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~-----------------~p~~~~--~l~~L~~L~l~~n~l~~~~p~~~~ 66 (427)
+|+++| +|.+++++++|++|+|++|.++|. +|.+++ ++++|++|+|++|.+.|.+|..++
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~ 270 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK 270 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh
Confidence 789998 999999999999999999999975 999999 999999999999999999999999
Q ss_pred CCCCCCeEEccCcc-Ccc-cCCCCcccc------ccccceeeccCCcCcCCCCC--CCcCCCCCCeEECcCCcccccCCc
Q 042634 67 KCQNLILLDLSNNN-LTG-TTPTEVIGL------SSLSIYLDLSQNQLNGPLPS--NFGILKNLGAIDISENKLSGQIPS 136 (427)
Q Consensus 67 ~l~~L~~l~l~~N~-~~~-~~p~~~~~l------~~l~~~L~l~~n~~~~~~p~--~~~~l~~L~~l~l~~n~~~~~~p~ 136 (427)
++++|++|++++|+ ++| .+|..++.+ ++| ++|++++|+++ .+|. .++++++|+.|++++|+++|.+|
T Consensus 271 ~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L-~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip- 347 (636)
T 4eco_A 271 ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKI-QIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP- 347 (636)
T ss_dssp TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTC-CEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-
T ss_pred cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCC-CEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-
Confidence 99999999999999 998 899888876 888 68999999999 8999 99999999999999999999999
Q ss_pred cccccccccceeeeeeeccccCCCCcccccC-CceeeccCCcccccccc
Q 042634 137 SIGSCIRLEQLVMNGNFFRGNIPSSLSSLRG-IENLDLSRNNFIRHRNL 184 (427)
Q Consensus 137 ~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~-L~~L~L~~N~ll~Hpni 184 (427)
.++.+++|+.|++++|.++ .+|..+..+++ |+.|++++|.+..-|..
T Consensus 348 ~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~ 395 (636)
T 4eco_A 348 AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNI 395 (636)
T ss_dssp CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSC
T ss_pred hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccchh
Confidence 9999999999999999999 78899999999 99999999998765543
No 266
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.90 E-value=1.7e-23 Score=196.17 Aligned_cols=175 Identities=28% Similarity=0.295 Sum_probs=81.2
Q ss_pred eeecCCccc--ccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCC-cCccCCCCCCeEEccC
Q 042634 2 FTLVGNQFT--GRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIP-SSLGKCQNLILLDLSN 78 (427)
Q Consensus 2 l~l~~n~l~--~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~l~l~~ 78 (427)
|+|++|.++ +..|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|.+++..+ ..+..+++|++|++++
T Consensus 57 L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~ 135 (306)
T 2z66_A 57 LSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 135 (306)
T ss_dssp EECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTT
T ss_pred EECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCC
Confidence 455555554 222344444555555555555554 344444445555555555555442211 2344444455555555
Q ss_pred ccCcccCCCCccccccccceeeccCCcCcC-CCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecccc
Q 042634 79 NNLTGTTPTEVIGLSSLSIYLDLSQNQLNG-PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 79 N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
|.+++..|..+.++++| ++|++++|.+++ .+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+++.
T Consensus 136 n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 136 THTRVAFNGIFNGLSSL-EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp SCCEECSTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC
T ss_pred CcCCccchhhcccCcCC-CEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc
Confidence 55444444444444444 344444444443 2444444444444444444444443344444444444444444444443
Q ss_pred CCCCcccccCCceeeccCCcc
Q 042634 158 IPSSLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 158 ~p~~l~~l~~L~~L~L~~N~l 178 (427)
.+..+..+++|+.|++++|.+
T Consensus 215 ~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 215 DTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp CSGGGTTCTTCCEEECTTSCC
T ss_pred ChhhccCcccCCEeECCCCCC
Confidence 333444444444444444444
No 267
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=6.1e-23 Score=190.74 Aligned_cols=173 Identities=23% Similarity=0.260 Sum_probs=150.8
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|.+++..|..+..+++|+.|+|++|.++ .+|.. +.+++|++|+|++|.++ .+|..+..+++|++|++++|+
T Consensus 35 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~ 111 (290)
T 1p9a_G 35 ILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNR 111 (290)
T ss_dssp EEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSC
T ss_pred EEEcCCCcCCccCHHHhhcCCCCCEEECCCCccC-cccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCc
Confidence 3789999999888888999999999999999998 46553 88999999999999999 899999999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+++..|..|.++.+| ++|+|++|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|.++ .+|.
T Consensus 112 l~~l~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~ 189 (290)
T 1p9a_G 112 LTSLPLGALRGLGEL-QELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPK 189 (290)
T ss_dssp CCCCCSSTTTTCTTC-CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCT
T ss_pred CcccCHHHHcCCCCC-CEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccCh
Confidence 997777888999999 67999999998766677889999999999999999533345678999999999999999 4678
Q ss_pred CcccccCCceeeccCCcc
Q 042634 161 SLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~l 178 (427)
.+..+..|+.+++++|.+
T Consensus 190 ~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 190 GFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp TTTTTCCCSEEECCSCCB
T ss_pred hhcccccCCeEEeCCCCc
Confidence 888888899999988876
No 268
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=6.3e-23 Score=188.96 Aligned_cols=174 Identities=25% Similarity=0.267 Sum_probs=152.6
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|++++|.++ .++ .+..+++|++|+|++|.+++ + +.++.+++|++|+|++|.+++..|..+..+++|++|++++|++
T Consensus 46 L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 121 (272)
T 3rfs_A 46 IIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL 121 (272)
T ss_dssp EECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred eeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcC
Confidence 688899988 434 58999999999999999985 4 4799999999999999999965556688999999999999999
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~ 161 (427)
++..+..+.++++| ++|++++|++++..+..++.+++|+.|++++|++++..|..++.+++|+.|++++|.+++..+..
T Consensus 122 ~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 200 (272)
T 3rfs_A 122 QSLPDGVFDKLTNL-TYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGV 200 (272)
T ss_dssp CCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred CccCHHHhccCCCC-CEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHH
Confidence 97777778899999 68999999999766677899999999999999999766667889999999999999999888878
Q ss_pred cccccCCceeeccCCcccc
Q 042634 162 LSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 162 l~~l~~L~~L~L~~N~ll~ 180 (427)
+..+++|+.|++++|.+..
T Consensus 201 ~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 201 FDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp TTTCTTCCEEECCSSCBCC
T ss_pred HhCCcCCCEEEccCCCccc
Confidence 8999999999999998754
No 269
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=1e-22 Score=187.28 Aligned_cols=177 Identities=24% Similarity=0.299 Sum_probs=157.1
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCc-chhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPS-SIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
+|+|++|++++..+..|..+++|++|+|++|+++ .+|. .|.++++|++|++++|.+++..+..+..+++|++|++++|
T Consensus 41 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 119 (270)
T 2o6q_A 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119 (270)
T ss_dssp EEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSS
T ss_pred EEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCC
Confidence 3799999999776678999999999999999998 5665 4689999999999999999544456789999999999999
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCC
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p 159 (427)
.+++..+..+.++++| ++|+|++|.+++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+++..+
T Consensus 120 ~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (270)
T 2o6q_A 120 QLKSLPPRVFDSLTKL-TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPE 198 (270)
T ss_dssp CCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred ccCeeCHHHhCcCcCC-CEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCH
Confidence 9998888888999999 689999999996555668999999999999999996555678999999999999999998777
Q ss_pred CCcccccCCceeeccCCccc
Q 042634 160 SSLSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll 179 (427)
..+..+++|+.|++++|.+.
T Consensus 199 ~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 199 GAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTTCTTCCEEECCSSCBC
T ss_pred HHhccccCCCEEEecCCCee
Confidence 77899999999999999864
No 270
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=5.2e-23 Score=189.90 Aligned_cols=180 Identities=20% Similarity=0.175 Sum_probs=143.0
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|++++..+..+..+++|++|+|++|++++..+..++++++|++|+|++|.+++..|..+..+++|++|++++|.
T Consensus 32 ~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 111 (276)
T 2z62_A 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETN 111 (276)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCC
Confidence 37888888887766688888889999998888886555678888889999999888886666778888889999999888
Q ss_pred CcccCCCCccccccccceeeccCCcCcC-CCCCCCcCCCCCCeEECcCCcccccCCcccccccccc----ceeeeeeecc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNG-PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLE----QLVMNGNFFR 155 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~----~l~l~~n~l~ 155 (427)
+++..+..+..+++| ++|++++|.+++ .+|..++.+++|+.|++++|++++..+..+..+.+++ .|++++|.++
T Consensus 112 l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~ 190 (276)
T 2z62_A 112 LASLENFPIGHLKTL-KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 190 (276)
T ss_dssp CCCSTTCCCTTCTTC-CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCC
T ss_pred ccccCchhcccCCCC-CEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCccc
Confidence 887766678888888 678888888875 3688888888899999998888876666777777777 7788888888
Q ss_pred ccCCCCcccccCCceeeccCCcccccc
Q 042634 156 GNIPSSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 156 ~~~p~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
+..+..+.. .+|+.|++++|.+..-|
T Consensus 191 ~~~~~~~~~-~~L~~L~L~~n~l~~~~ 216 (276)
T 2z62_A 191 FIQPGAFKE-IRLKELALDTNQLKSVP 216 (276)
T ss_dssp EECTTSSCS-CCEEEEECCSSCCSCCC
T ss_pred ccCccccCC-CcccEEECCCCceeecC
Confidence 655544443 47888888888775443
No 271
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.89 E-value=5.1e-23 Score=192.87 Aligned_cols=180 Identities=23% Similarity=0.283 Sum_probs=161.9
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeeccccee--ecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccC
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWG--EIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSN 78 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~--~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 78 (427)
+|+|++|+++...+..+..+++|+.|+|++|.++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|++++
T Consensus 32 ~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~ 110 (306)
T 2z66_A 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQH 110 (306)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTT
T ss_pred EEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCC
Confidence 37999999994433457999999999999999983 34778889999999999999999 7898999999999999999
Q ss_pred ccCcccCC-CCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccc-cCCccccccccccceeeeeeeccc
Q 042634 79 NNLTGTTP-TEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSG-QIPSSIGSCIRLEQLVMNGNFFRG 156 (427)
Q Consensus 79 N~~~~~~p-~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~-~~p~~~~~~~~l~~l~l~~n~l~~ 156 (427)
|++++..+ ..+..+++| ++|++++|.+++..|..+..+++|+.|++++|.+++ .+|..+..+++|+.|++++|.+++
T Consensus 111 n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 189 (306)
T 2z66_A 111 SNLKQMSEFSVFLSLRNL-IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 189 (306)
T ss_dssp SEEESSTTTTTTTTCTTC-CEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE
T ss_pred CcccccccchhhhhccCC-CEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCC
Confidence 99996665 578889999 689999999998889999999999999999999986 589999999999999999999999
Q ss_pred cCCCCcccccCCceeeccCCcccccc
Q 042634 157 NIPSSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 157 ~~p~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
..|..+..+++|+.|++++|.+...+
T Consensus 190 ~~~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 190 LSPTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred cCHHHhcCCCCCCEEECCCCccCccC
Confidence 88999999999999999999986654
No 272
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.89 E-value=6.7e-23 Score=202.77 Aligned_cols=60 Identities=23% Similarity=0.262 Sum_probs=32.8
Q ss_pred CCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCCcc
Q 042634 119 NLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 119 ~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l 178 (427)
+|+.|++++|.+++.+|..++.+++|+.|++++|.+++..|..+..+++|+.|++++|.+
T Consensus 276 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp CCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 344444555555544555555555555555555555555555555555555555555554
No 273
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.89 E-value=1.2e-23 Score=197.80 Aligned_cols=159 Identities=21% Similarity=0.204 Sum_probs=69.9
Q ss_pred CCCCCCEeeeecccceeecCcch--hccccCCEeeeccccCcccCCcCccCC-----CCCCeEEccCccCcccCCCCccc
Q 042634 19 DLHKLQRLTLEMNKFWGEIPSSI--GNLTLLITLNFAENMLEGSIPSSLGKC-----QNLILLDLSNNNLTGTTPTEVIG 91 (427)
Q Consensus 19 ~l~~L~~L~l~~n~~~~~~p~~~--~~l~~L~~L~l~~n~l~~~~p~~~~~l-----~~L~~l~l~~N~~~~~~p~~~~~ 91 (427)
++++|++|+|++|++++.+|..+ +.+++|++|+|++|++++. |..++.+ ++|++|++++|++++..|..+.+
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 44445555555555444444443 4444455555555554432 4444443 44455555555544444444444
Q ss_pred cccccceeeccCCcCcCC--CCCCC--cCCCCCCeEECcCCcccc--cCCc-cccccccccceeeeeeeccccCC-CCcc
Q 042634 92 LSSLSIYLDLSQNQLNGP--LPSNF--GILKNLGAIDISENKLSG--QIPS-SIGSCIRLEQLVMNGNFFRGNIP-SSLS 163 (427)
Q Consensus 92 l~~l~~~L~l~~n~~~~~--~p~~~--~~l~~L~~l~l~~n~~~~--~~p~-~~~~~~~l~~l~l~~n~l~~~~p-~~l~ 163 (427)
+++| ++|++++|++.+. +|..+ +.+++|+.|++++|++++ .++. .+..+++|+.|++++|.+++..| ..+.
T Consensus 172 l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 250 (312)
T 1wwl_A 172 FPAL-STLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD 250 (312)
T ss_dssp CSSC-CEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC
T ss_pred CCCC-CEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhh
Confidence 4444 3445554444332 12222 444444444444444441 1111 12234444444444444444332 2233
Q ss_pred cccCCceeeccCCccc
Q 042634 164 SLRGIENLDLSRNNFI 179 (427)
Q Consensus 164 ~l~~L~~L~L~~N~ll 179 (427)
.+++|+.|++++|.+.
T Consensus 251 ~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 251 WPSQLNSLNLSFTGLK 266 (312)
T ss_dssp CCTTCCEEECTTSCCS
T ss_pred hcCCCCEEECCCCccC
Confidence 3444444444444443
No 274
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.89 E-value=1.4e-22 Score=200.38 Aligned_cols=176 Identities=23% Similarity=0.259 Sum_probs=128.6
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|++++..|..|.++++|+.|+|++|++++..|..|+++++|++|+|++|.+++..+..+..+++|++|++++|+
T Consensus 79 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 158 (452)
T 3zyi_A 79 YLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNP 158 (452)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCC
T ss_pred EEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCC
Confidence 47999999998888999999999999999999997777889999999999999999994444558889999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCC-CCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLP-SNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p-~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p 159 (427)
+++..+..+.++++| +.|++++|...+.+| ..+.++++|+.|++++|+++ .+| .+..+++|+.|++++|.+++..|
T Consensus 159 l~~~~~~~~~~l~~L-~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~ 235 (452)
T 3zyi_A 159 IESIPSYAFNRVPSL-MRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRP 235 (452)
T ss_dssp CCEECTTTTTTCTTC-CEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECG
T ss_pred cceeCHhHHhcCCcc-cEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCc
Confidence 986666667777777 467777643333443 34666666666666666665 333 35555666666666666665555
Q ss_pred CCcccccCCceeeccCCccc
Q 042634 160 SSLSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll 179 (427)
..+..+++|+.|++++|.+.
T Consensus 236 ~~~~~l~~L~~L~L~~n~l~ 255 (452)
T 3zyi_A 236 GSFHGLSSLKKLWVMNSQVS 255 (452)
T ss_dssp GGGTTCTTCCEEECTTSCCC
T ss_pred ccccCccCCCEEEeCCCcCc
Confidence 55566666666666655553
No 275
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.89 E-value=2.5e-22 Score=190.48 Aligned_cols=175 Identities=23% Similarity=0.281 Sum_probs=121.8
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|.+++..|..+.++++|++|+|++|++++..|..|+++++|++|++++|.++ .+|..+. ++|++|++++|+
T Consensus 58 ~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~ 134 (332)
T 2ft3_A 58 LLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNR 134 (332)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSC
T ss_pred EEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCc
Confidence 3788999999777778999999999999999998766888999999999999999988 8887765 778888888888
Q ss_pred CcccCCCCccccccccceeeccCCcCc--CCCCCCCcCC--------------------CCCCeEECcCCcccccCCccc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLN--GPLPSNFGIL--------------------KNLGAIDISENKLSGQIPSSI 138 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~--~~~p~~~~~l--------------------~~L~~l~l~~n~~~~~~p~~~ 138 (427)
+++..+..+.++++| +.|++++|.++ +..|..+..+ ++|+.|++++|.+++..|..+
T Consensus 135 i~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l 213 (332)
T 2ft3_A 135 IRKVPKGVFSGLRNM-NCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDL 213 (332)
T ss_dssp CCCCCSGGGSSCSSC-CEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSS
T ss_pred cCccCHhHhCCCccC-CEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHh
Confidence 886555567778887 56888888874 3555655555 234444444444443333445
Q ss_pred cccccccceeeeeeeccccCCCCcccccCCceeeccCCccc
Q 042634 139 GSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 139 ~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll 179 (427)
..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.
T Consensus 214 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 214 LRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp TTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred cCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 55555555555555555544445555555555555555544
No 276
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.5e-22 Score=184.10 Aligned_cols=156 Identities=24% Similarity=0.252 Sum_probs=141.5
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
.|+|++|++++..|..+..+++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..+..+++|++|++++|+
T Consensus 39 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 118 (251)
T 3m19_A 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQ 118 (251)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCc
Confidence 37999999998888899999999999999999997666779999999999999999995555678999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecccc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
+++..+..+.++.+| ++|+|++|++++..+..++.+++|+.|++++|++++..|..+..+++|+.|++++|.+++.
T Consensus 119 l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 119 LKSLPSGVFDRLTKL-KELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCcChhHhccCCcc-cEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 997777778899999 6899999999966666899999999999999999976667899999999999999999865
No 277
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=1.7e-23 Score=220.10 Aligned_cols=175 Identities=21% Similarity=0.313 Sum_probs=157.6
Q ss_pred cCCcccccCCccccCCCCCCEeeeeccccee-----------------ecCcchh--ccccCCEeeeccccCcccCCcCc
Q 042634 5 VGNQFTGRIPGSIGDLHKLQRLTLEMNKFWG-----------------EIPSSIG--NLTLLITLNFAENMLEGSIPSSL 65 (427)
Q Consensus 5 ~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~-----------------~~p~~~~--~l~~L~~L~l~~n~l~~~~p~~~ 65 (427)
.+|+|+| +|..+++|++|+.|+|++|+++| .+|.+++ ++++|++|+|++|.+.|.+|..+
T Consensus 433 ~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l 511 (876)
T 4ecn_A 433 LTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFL 511 (876)
T ss_dssp CSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGG
T ss_pred ccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHH
Confidence 4589998 89999999999999999999997 3999988 99999999999999999999999
Q ss_pred cCCCCCCeEEccCcc-Ccc-cCCCCccccc-------cccceeeccCCcCcCCCCC--CCcCCCCCCeEECcCCcccccC
Q 042634 66 GKCQNLILLDLSNNN-LTG-TTPTEVIGLS-------SLSIYLDLSQNQLNGPLPS--NFGILKNLGAIDISENKLSGQI 134 (427)
Q Consensus 66 ~~l~~L~~l~l~~N~-~~~-~~p~~~~~l~-------~l~~~L~l~~n~~~~~~p~--~~~~l~~L~~l~l~~n~~~~~~ 134 (427)
+++++|++|++++|+ ++| .+|..++.+. +| +.|+|++|+++ .+|. .++++++|+.|++++|+++ .+
T Consensus 512 ~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L-~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~l 588 (876)
T 4ecn_A 512 YDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKI-QIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HL 588 (876)
T ss_dssp GGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTC-CEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BC
T ss_pred hCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCc-cEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cc
Confidence 999999999999998 988 7888777665 88 68999999998 8998 8999999999999999999 89
Q ss_pred CccccccccccceeeeeeeccccCCCCcccccC-CceeeccCCcccccccch
Q 042634 135 PSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRG-IENLDLSRNNFIRHRNLV 185 (427)
Q Consensus 135 p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~-L~~L~L~~N~ll~Hpniv 185 (427)
| .++.+++|+.|++++|.++ .+|..+..+++ |+.|++++|.+..-|...
T Consensus 589 p-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~ 638 (876)
T 4ecn_A 589 E-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIF 638 (876)
T ss_dssp C-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCCSCC
T ss_pred h-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCchhh
Confidence 9 8999999999999999999 78888999998 999999999987655443
No 278
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.88 E-value=1.5e-22 Score=200.27 Aligned_cols=113 Identities=22% Similarity=0.195 Sum_probs=92.4
Q ss_pred CCCCeEEccCccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCcccccccccccee
Q 042634 69 QNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLV 148 (427)
Q Consensus 69 ~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~ 148 (427)
++|++|++++|.+++.+|..+..+++| ++|++++|++++..|..++.+++|+.|++++|++++..|..++++++|+.|+
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDL-EQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTC-CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred cCceEEEecCccccccchhhcccCCCC-CEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 356667777777777778888888888 6788888888877788888888888888888888877777888888888888
Q ss_pred eeeeeccccCCCCcccccCCceeeccCCcccccc
Q 042634 149 MNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 149 l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
+++|.+++..|..+..+++|+.|++++|++..-|
T Consensus 354 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 387 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGLPNLKELALDTNQLKSVP 387 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCCCcccccChhhccccccccEEECCCCccccCC
Confidence 8888888887888888888888888888876543
No 279
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.88 E-value=9.5e-23 Score=188.17 Aligned_cols=178 Identities=21% Similarity=0.239 Sum_probs=157.4
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|++++..+..+..+++|++|+|++|.+++..|..++++++|++|++++|.+++..+..++.+++|++|++++|.
T Consensus 56 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 135 (276)
T 2z62_A 56 VLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 135 (276)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCc
Confidence 47999999998777889999999999999999997777889999999999999999996555579999999999999999
Q ss_pred Cccc-CCCCccccccccceeeccCCcCcCCCCCCCcCCCCCC----eEECcCCcccccCCccccccccccceeeeeeecc
Q 042634 81 LTGT-TPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLG----AIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFR 155 (427)
Q Consensus 81 ~~~~-~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~----~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~ 155 (427)
+++. +|..+.++++| +.|++++|++++..+..+..+++|+ .|++++|++++ +|.......+|+.|++++|.++
T Consensus 136 l~~~~l~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~-~~~~~~~~~~L~~L~L~~n~l~ 213 (276)
T 2z62_A 136 IQSFKLPEYFSNLTNL-EHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLKELALDTNQLK 213 (276)
T ss_dssp CCCCCCCGGGGGCTTC-CEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCE-ECTTSSCSCCEEEEECCSSCCS
T ss_pred cceecCchhhccCCCC-CEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccc-cCccccCCCcccEEECCCCcee
Confidence 9863 68899999999 6899999999977778888888877 89999999995 5555555568999999999999
Q ss_pred ccCCCCcccccCCceeeccCCcccc
Q 042634 156 GNIPSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 156 ~~~p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
+..+..+..+++|+.+++++|.+..
T Consensus 214 ~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 214 SVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred ecCHhHhcccccccEEEccCCcccc
Confidence 8766778999999999999999864
No 280
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.88 E-value=9.9e-23 Score=208.92 Aligned_cols=179 Identities=23% Similarity=0.212 Sum_probs=126.2
Q ss_pred eeecCCccccc--CCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCC-cCccCCCCCCeEEccC
Q 042634 2 FTLVGNQFTGR--IPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIP-SSLGKCQNLILLDLSN 78 (427)
Q Consensus 2 l~l~~n~l~~~--~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~l~l~~ 78 (427)
|+|++|.+++. +|..+..+++|+.|+|++|.++ .+|..++.+++|+.|++++|.+++..| ..+..+++|++|++++
T Consensus 355 L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~ 433 (606)
T 3vq2_A 355 LDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISY 433 (606)
T ss_dssp EECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTT
T ss_pred EECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcC
Confidence 56677777655 3666777777777777777776 466667777777777777777775555 4666777777777777
Q ss_pred ccCcccCCCCccccccccceeeccCCcCcC-CCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecccc
Q 042634 79 NNLTGTTPTEVIGLSSLSIYLDLSQNQLNG-PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 79 N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
|.+++..|..+.++++| +.|++++|++++ .+|..++.+++|+.|++++|++++..|..++++++|+.|++++|.+++.
T Consensus 434 n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 512 (606)
T 3vq2_A 434 TNTKIDFDGIFLGLTSL-NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 512 (606)
T ss_dssp SCCEECCTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCE
T ss_pred CCCCccchhhhcCCCCC-CEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCc
Confidence 77776677777777777 567777777765 3667777777777777777777766667777777777777777777776
Q ss_pred CCCCcccccCCceeeccCCcccccc
Q 042634 158 IPSSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 158 ~p~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
.|..+..+++|+.|++++|++..-|
T Consensus 513 ~~~~~~~l~~L~~L~l~~N~l~~~p 537 (606)
T 3vq2_A 513 DSSHYNQLYSLSTLDCSFNRIETSK 537 (606)
T ss_dssp EGGGTTTCTTCCEEECTTSCCCCEE
T ss_pred CHHHccCCCcCCEEECCCCcCcccC
Confidence 6777777777777777777665433
No 281
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.3e-22 Score=183.24 Aligned_cols=178 Identities=16% Similarity=0.180 Sum_probs=151.4
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeeccc-ceeecCcchhccccCCEeeecc-ccCcccCCcCccCCCCCCeEEccC
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNK-FWGEIPSSIGNLTLLITLNFAE-NMLEGSIPSSLGKCQNLILLDLSN 78 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~-~~~~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~l~l~~ 78 (427)
+|+|++|++++..+..+.++++|+.|+|++|. +++..+..|+++++|++|++++ |.+++..|..+..+++|++|++++
T Consensus 35 ~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~ 114 (239)
T 2xwt_C 35 TLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFN 114 (239)
T ss_dssp EEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEE
T ss_pred EEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCC
Confidence 37999999997777789999999999999997 8744445799999999999998 999955556788999999999999
Q ss_pred ccCcccCCCCccccccccc---eeeccCC-cCcCCCCCCCcCCCCCC-eEECcCCcccccCCccccccccccceeeeeee
Q 042634 79 NNLTGTTPTEVIGLSSLSI---YLDLSQN-QLNGPLPSNFGILKNLG-AIDISENKLSGQIPSSIGSCIRLEQLVMNGNF 153 (427)
Q Consensus 79 N~~~~~~p~~~~~l~~l~~---~L~l~~n-~~~~~~p~~~~~l~~L~-~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~ 153 (427)
|++++ +|. +..+.+| + .|++++| .+++..+..|..+++|+ .|++++|+++ .+|......++|+.|++++|.
T Consensus 115 n~l~~-lp~-~~~l~~L-~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 115 TGLKM-FPD-LTKVYST-DIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp ECCCS-CCC-CTTCCBC-CSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred CCCcc-ccc-ccccccc-ccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 99985 666 7788888 5 7999999 89866667799999999 9999999999 777765555899999999995
Q ss_pred -ccccCCCCcccc-cCCceeeccCCcccccc
Q 042634 154 -FRGNIPSSLSSL-RGIENLDLSRNNFIRHR 182 (427)
Q Consensus 154 -l~~~~p~~l~~l-~~L~~L~L~~N~ll~Hp 182 (427)
+++..+..+..+ ++|+.|++++|.+..-|
T Consensus 191 ~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~ 221 (239)
T 2xwt_C 191 YLTVIDKDAFGGVYSGPSLLDVSQTSVTALP 221 (239)
T ss_dssp TCCEECTTTTTTCSBCCSEEECTTCCCCCCC
T ss_pred CcccCCHHHhhccccCCcEEECCCCccccCC
Confidence 987777888999 99999999999876544
No 282
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.88 E-value=1.4e-22 Score=201.71 Aligned_cols=177 Identities=21% Similarity=0.195 Sum_probs=155.8
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCc-CccCCCCCCeEEccCc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPS-SLGKCQNLILLDLSNN 79 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~l~l~~N 79 (427)
+|||++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|. .+..+++|++|++++|
T Consensus 36 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n 114 (477)
T 2id5_A 36 LLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISEN 114 (477)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCTTSSTTCTTCCEEECTTS
T ss_pred EEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-ccCcccccCCCCCCEEECCCC
Confidence 3799999999888889999999999999999999777889999999999999999999 5554 5788999999999999
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCC
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p 159 (427)
++++..|..+.++.+| +.|++++|.+++..|..+.++++|+.|++++|++++..+..+.++++|+.|++++|.+.+..+
T Consensus 115 ~i~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~ 193 (477)
T 2id5_A 115 KIVILLDYMFQDLYNL-KSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD 193 (477)
T ss_dssp CCCEECTTTTTTCTTC-CEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECT
T ss_pred ccccCChhHccccccC-CEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeCh
Confidence 9998888889999999 679999999998888899999999999999999985444568889999999999999998877
Q ss_pred CCcccccCCceeeccCCccc
Q 042634 160 SSLSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll 179 (427)
..+..+++|+.|++++|...
T Consensus 194 ~~~~~l~~L~~L~l~~~~~~ 213 (477)
T 2id5_A 194 YSFKRLYRLKVLEISHWPYL 213 (477)
T ss_dssp TCSCSCTTCCEEEEECCTTC
T ss_pred hhcccCcccceeeCCCCccc
Confidence 78888888888888876553
No 283
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.88 E-value=6.1e-22 Score=187.56 Aligned_cols=175 Identities=24% Similarity=0.318 Sum_probs=118.2
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|++++..+..+.++++|++|+|++|++++..|..|+++++|++|++++|.++ .+|..+. ++|++|++++|+
T Consensus 56 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~ 132 (330)
T 1xku_A 56 LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENE 132 (330)
T ss_dssp EEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSC
T ss_pred EEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCc
Confidence 3789999999776678999999999999999999766888999999999999999998 7787664 567777777777
Q ss_pred CcccCCCCccccccccceeeccCCcCc--CCCCCCCcCCCCCCeEECcCCccc---------------------ccCCcc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLN--GPLPSNFGILKNLGAIDISENKLS---------------------GQIPSS 137 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~--~~~p~~~~~l~~L~~l~l~~n~~~---------------------~~~p~~ 137 (427)
+++..+..+.++.+| +.|++++|+++ +..+..+..+++|+.|++++|.++ +..|..
T Consensus 133 l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~ 211 (330)
T 1xku_A 133 ITKVRKSVFNGLNQM-IVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAAS 211 (330)
T ss_dssp CCBBCHHHHTTCTTC-CEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGG
T ss_pred ccccCHhHhcCCccc-cEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccCHHH
Confidence 775555556666666 45666666664 244555555555555555555544 333444
Q ss_pred ccccccccceeeeeeeccccCCCCcccccCCceeeccCCccc
Q 042634 138 IGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 138 ~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll 179 (427)
+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.
T Consensus 212 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 212 LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp GTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred hcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 555555555555555555444444555555555555555544
No 284
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.88 E-value=3.7e-22 Score=196.72 Aligned_cols=176 Identities=23% Similarity=0.244 Sum_probs=133.7
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|++++..+..|.++++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..+..+++|++|++++|+
T Consensus 68 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 147 (440)
T 3zyj_A 68 LLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNP 147 (440)
T ss_dssp EEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCC
T ss_pred EEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCc
Confidence 37899999998888899999999999999999986666789999999999999999994444468889999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCC-CCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLP-SNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p-~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p 159 (427)
+++..+..+.++++| +.|++++|...+.++ ..|.++++|+.|++++|.++ .+| .+..+++|+.|++++|.+++..|
T Consensus 148 i~~~~~~~~~~l~~L-~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~ 224 (440)
T 3zyj_A 148 IESIPSYAFNRIPSL-RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRP 224 (440)
T ss_dssp CCEECTTTTTTCTTC-CEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECT
T ss_pred ccccCHHHhhhCccc-CEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccCh
Confidence 987776677777777 567777744333444 35677777777777777776 455 35666667777777777766666
Q ss_pred CCcccccCCceeeccCCccc
Q 042634 160 SSLSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll 179 (427)
..+..+++|+.|++++|.+.
T Consensus 225 ~~~~~l~~L~~L~L~~n~l~ 244 (440)
T 3zyj_A 225 GSFQGLMHLQKLWMIQSQIQ 244 (440)
T ss_dssp TTTTTCTTCCEEECTTCCCC
T ss_pred hhhccCccCCEEECCCCcee
Confidence 66666666666666666653
No 285
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.88 E-value=3.6e-23 Score=194.54 Aligned_cols=178 Identities=21% Similarity=0.208 Sum_probs=151.3
Q ss_pred CeeecCCcccccCCccc--cCCCCCCEeeeecccceeecCcchhcc-----ccCCEeeeccccCcccCCcCccCCCCCCe
Q 042634 1 AFTLVGNQFTGRIPGSI--GDLHKLQRLTLEMNKFWGEIPSSIGNL-----TLLITLNFAENMLEGSIPSSLGKCQNLIL 73 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~--~~l~~L~~L~l~~n~~~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 73 (427)
+|+|++|+++|.+|..+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|.+++..|..++.+++|++
T Consensus 99 ~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 177 (312)
T 1wwl_A 99 ELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALST 177 (312)
T ss_dssp EEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCE
T ss_pred EEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCE
Confidence 48999999999999987 8999999999999999965 8889988 99999999999999777789999999999
Q ss_pred EEccCccCcccC--CCCc--cccccccceeeccCCcCcC--CCC-CCCcCCCCCCeEECcCCcccccCC-cccccccccc
Q 042634 74 LDLSNNNLTGTT--PTEV--IGLSSLSIYLDLSQNQLNG--PLP-SNFGILKNLGAIDISENKLSGQIP-SSIGSCIRLE 145 (427)
Q Consensus 74 l~l~~N~~~~~~--p~~~--~~l~~l~~~L~l~~n~~~~--~~p-~~~~~l~~L~~l~l~~n~~~~~~p-~~~~~~~~l~ 145 (427)
|++++|++.+.+ |..+ ..+++| ++|+|++|++++ .++ ..+..+++|+.|++++|++++.+| ..+..+++|+
T Consensus 178 L~Ls~N~l~~~~~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~ 256 (312)
T 1wwl_A 178 LDLSDNPELGERGLISALCPLKFPTL-QVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLN 256 (312)
T ss_dssp EECCSCTTCHHHHHHHHSCTTSCTTC-CEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCC
T ss_pred EECCCCCcCcchHHHHHHHhccCCCC-CEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCC
Confidence 999999987652 3333 778888 689999999973 222 334678999999999999998775 4566789999
Q ss_pred ceeeeeeeccccCCCCcccccCCceeeccCCccccccc
Q 042634 146 QLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHRN 183 (427)
Q Consensus 146 ~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~Hpn 183 (427)
.|++++|.++ .+|..+. ++|+.|++++|++..-|.
T Consensus 257 ~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~p~ 291 (312)
T 1wwl_A 257 SLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRNPS 291 (312)
T ss_dssp EEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSCCC
T ss_pred EEECCCCccC-hhhhhcc--CCceEEECCCCCCCCChh
Confidence 9999999999 6777776 889999999999877655
No 286
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.88 E-value=2.9e-22 Score=198.19 Aligned_cols=179 Identities=22% Similarity=0.243 Sum_probs=154.8
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccC-c
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSN-N 79 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~-N 79 (427)
+|+|++|++++..|..|.++++|++|+|++|++++..+..|+++++|++|+|++|.+++..+..+..+++|++|++++ |
T Consensus 103 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~ 182 (452)
T 3zyi_A 103 VLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELK 182 (452)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCT
T ss_pred EEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCC
Confidence 479999999988889999999999999999999954445689999999999999999955455788999999999999 4
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCC
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p 159 (427)
.+....+..+.++.+| ++|+|++|.++ .+| .+..+++|+.|++++|++++..|..|.++++|+.|++++|.+++..+
T Consensus 183 ~l~~i~~~~~~~l~~L-~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 259 (452)
T 3zyi_A 183 KLEYISEGAFEGLFNL-KYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIER 259 (452)
T ss_dssp TCCEECTTTTTTCTTC-CEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECT
T ss_pred CccccChhhccCCCCC-CEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECH
Confidence 5554444568889999 68999999998 455 58889999999999999998888899999999999999999999888
Q ss_pred CCcccccCCceeeccCCcccccc
Q 042634 160 SSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
..+..+++|+.|++++|++..-+
T Consensus 260 ~~~~~l~~L~~L~L~~N~l~~~~ 282 (452)
T 3zyi_A 260 NAFDGLASLVELNLAHNNLSSLP 282 (452)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCC
T ss_pred HHhcCCCCCCEEECCCCcCCccC
Confidence 89999999999999999886544
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.88 E-value=3.4e-22 Score=204.44 Aligned_cols=104 Identities=28% Similarity=0.310 Sum_probs=66.0
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcC-ccCCCCCCeEEccCcc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSS-LGKCQNLILLDLSNNN 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~l~l~~N~ 80 (427)
|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|+. ++.+++|++|++++|.
T Consensus 80 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~ 158 (597)
T 3oja_B 80 LNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNN 158 (597)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHhccCCCCCEEEeeCCc
Confidence 566666666655556666666666666666666544445666666666666666666 44443 4666666666666666
Q ss_pred CcccCCCCccccccccceeeccCCcCc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLN 107 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~ 107 (427)
+++..|..+.++++| ..|++++|.++
T Consensus 159 l~~~~~~~~~~l~~L-~~L~L~~N~l~ 184 (597)
T 3oja_B 159 LERIEDDTFQATTSL-QNLQLSSNRLT 184 (597)
T ss_dssp CCBCCTTTTTTCTTC-CEEECTTSCCS
T ss_pred CCCCChhhhhcCCcC-cEEECcCCCCC
Confidence 666666666666666 45666666655
No 288
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.87 E-value=5.6e-22 Score=195.43 Aligned_cols=179 Identities=25% Similarity=0.287 Sum_probs=153.4
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCc-
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN- 79 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N- 79 (427)
+|+|++|++++..+..|.++++|+.|+|++|++++..+..|..+++|++|+|++|.+++..+..+..+++|++|++++|
T Consensus 92 ~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~ 171 (440)
T 3zyj_A 92 ILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELK 171 (440)
T ss_dssp EEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCT
T ss_pred EEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCC
Confidence 4789999999777788999999999999999998433447899999999999999999555557889999999999995
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCC
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p 159 (427)
.+....+..+.++.+| ++|+|++|.++ .+| .+..+++|+.|++++|++++..|..|.++++|+.|++++|.+++..+
T Consensus 172 ~l~~i~~~~~~~l~~L-~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 248 (440)
T 3zyj_A 172 RLSYISEGAFEGLSNL-RYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIER 248 (440)
T ss_dssp TCCEECTTTTTTCSSC-CEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT
T ss_pred CcceeCcchhhccccc-CeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEECh
Confidence 4444444568889999 68999999998 666 47889999999999999998888899999999999999999999888
Q ss_pred CCcccccCCceeeccCCcccccc
Q 042634 160 SSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
..+..+++|+.|++++|++..-+
T Consensus 249 ~~~~~l~~L~~L~L~~N~l~~~~ 271 (440)
T 3zyj_A 249 NAFDNLQSLVEINLAHNNLTLLP 271 (440)
T ss_dssp TSSTTCTTCCEEECTTSCCCCCC
T ss_pred hhhcCCCCCCEEECCCCCCCccC
Confidence 89999999999999999886543
No 289
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=3.3e-22 Score=184.19 Aligned_cols=169 Identities=25% Similarity=0.268 Sum_probs=147.6
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|.+++ + +.+..+++|++|+|++|.+++..|..++++++|++|++++|.+++..|..++.+++|++|++++|+
T Consensus 67 ~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 144 (272)
T 3rfs_A 67 YLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQ 144 (272)
T ss_dssp EEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCc
Confidence 47999999996 3 579999999999999999996555668999999999999999996655668999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+++..+..+..+++| +.|++++|++++..+..++.+++|+.|++++|++++..|..++.+++|+.|++++|.+.+.
T Consensus 145 l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 220 (272)
T 3rfs_A 145 LQSLPKGVFDKLTNL-TELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 220 (272)
T ss_dssp CCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC---
T ss_pred cCccCHHHhccCccC-CEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc---
Confidence 997777778899999 6899999999977777789999999999999999987777789999999999999998865
Q ss_pred CcccccCCceeeccCCccc
Q 042634 161 SLSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll 179 (427)
+++++.+++..|.+.
T Consensus 221 ----~~~l~~l~~~~n~~~ 235 (272)
T 3rfs_A 221 ----CPGIRYLSEWINKHS 235 (272)
T ss_dssp ----TTTTHHHHHHHHHTG
T ss_pred ----CcHHHHHHHHHHhCC
Confidence 345777777766654
No 290
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.87 E-value=1.7e-22 Score=201.31 Aligned_cols=168 Identities=20% Similarity=0.248 Sum_probs=113.9
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|.+++..|..|+.+++|++|+|++|.+++..| ++.+++|++|+|++|.++ .+|.. ++|++|++++|.
T Consensus 38 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~-~l~~~----~~L~~L~L~~N~ 110 (487)
T 3oja_A 38 ELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-ELLVG----PSIETLHAANNN 110 (487)
T ss_dssp EEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEE-EEEEC----TTCCEEECCSSC
T ss_pred EEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCC-CCCCC----CCcCEEECcCCc
Confidence 48999999998878899999999999999999996554 999999999999999998 44422 566666666666
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCcccc-ccccccceeeeeeeccccCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIG-SCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~-~~~~l~~l~l~~n~l~~~~p 159 (427)
+++..+.. +++| ..|+|++|.+++..|..++.+++|+.|++++|.+++.+|..++ .+++|+.|++++|.+++..+
T Consensus 111 l~~~~~~~---l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~ 186 (487)
T 3oja_A 111 ISRVSCSR---GQGK-KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG 186 (487)
T ss_dssp CCCEEECC---CSSC-EEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC
T ss_pred CCCCCccc---cCCC-CEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc
Confidence 66544432 3445 4566666666655555666666666666666666655555554 45666666666666655421
Q ss_pred CCcccccCCceeeccCCccccc
Q 042634 160 SSLSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll~H 181 (427)
...+++|+.|++++|.+..-
T Consensus 187 --~~~l~~L~~L~Ls~N~l~~~ 206 (487)
T 3oja_A 187 --QVVFAKLKTLDLSSNKLAFM 206 (487)
T ss_dssp --CCCCTTCCEEECCSSCCCEE
T ss_pred --cccCCCCCEEECCCCCCCCC
Confidence 22355566666666655443
No 291
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.87 E-value=4.7e-22 Score=203.41 Aligned_cols=130 Identities=16% Similarity=0.153 Sum_probs=117.5
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|++++|.+++..+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..++.+++|++|++++|.+
T Consensus 56 l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 135 (597)
T 3oja_B 56 VTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL 135 (597)
T ss_dssp EEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCC
Confidence 68999999966556688999999999999999977777999999999999999999977677789999999999999999
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccc
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSG 132 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~ 132 (427)
++.++..|.++++| ++|+|++|.+++..|..++.+++|+.|++++|.+++
T Consensus 136 ~~l~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 136 SSLPRGIFHNTPKL-TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CCCCTTTTTTCTTC-CEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCHHHhccCCCC-CEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 96666667899999 689999999998888899999999999999999885
No 292
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.87 E-value=1.1e-21 Score=174.63 Aligned_cols=152 Identities=20% Similarity=0.240 Sum_probs=108.9
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCc-chhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPS-SIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+++++|.++ .+|..+. ..++.|+|++|++++..|. .|+.+++|++|+|++|.+++..|..+..+++|++|++++|+
T Consensus 16 l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 92 (220)
T 2v70_A 16 VDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNR 92 (220)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred eEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCc
Confidence 577777777 4666553 3457777777777754343 46777777888887777775555567777777777777777
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecccc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
+++..|..+.++.+| ++|+|++|++++..|..+..+++|+.|+|++|++++..|..|..+++|+.|++++|.++..
T Consensus 93 l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 93 LENVQHKMFKGLESL-KTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CCCCCGGGGTTCSSC-CEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred cCccCHhHhcCCcCC-CEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 776666667777777 5677777777766677777777777777777777766677777777777777777777643
No 293
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=3.6e-22 Score=187.49 Aligned_cols=177 Identities=20% Similarity=0.156 Sum_probs=149.8
Q ss_pred CeeecCCcccccCCccc--cCCCCCCEeeeecccceeecC----cchhccccCCEeeeccccCcccCCcCccCCCCCCeE
Q 042634 1 AFTLVGNQFTGRIPGSI--GDLHKLQRLTLEMNKFWGEIP----SSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILL 74 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~--~~l~~L~~L~l~~n~~~~~~p----~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l 74 (427)
+|+|++|.+++.+|..+ ..+++|+.|+|++|.+++..| ..+..+++|++|+|++|.+++..|..++.+++|++|
T Consensus 95 ~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 174 (310)
T 4glp_A 95 ELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSL 174 (310)
T ss_dssp EEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEE
T ss_pred EEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEE
Confidence 47999999999999988 999999999999999997555 345679999999999999997777889999999999
Q ss_pred EccCccCccc--C--CCCccccccccceeeccCCcCcCCCCC----CCcCCCCCCeEECcCCcccccCCcccccc---cc
Q 042634 75 DLSNNNLTGT--T--PTEVIGLSSLSIYLDLSQNQLNGPLPS----NFGILKNLGAIDISENKLSGQIPSSIGSC---IR 143 (427)
Q Consensus 75 ~l~~N~~~~~--~--p~~~~~l~~l~~~L~l~~n~~~~~~p~----~~~~l~~L~~l~l~~n~~~~~~p~~~~~~---~~ 143 (427)
++++|++.+. + +..+..+++| ++|+|++|+++ .+|. .++.+++|+.|++++|++++.+|..++.+ ++
T Consensus 175 ~Ls~N~l~~~~~~~~~~~~~~l~~L-~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~ 252 (310)
T 4glp_A 175 DLSDNPGLGERGLMAALCPHKFPAI-QNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSA 252 (310)
T ss_dssp ECCSCTTCHHHHHHTTSCTTSSCCC-CSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTT
T ss_pred ECCCCCCccchhhhHHHhhhcCCCC-CEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCc
Confidence 9999998752 2 2334678888 67999999997 4444 25788999999999999998779888887 69
Q ss_pred ccceeeeeeeccccCCCCcccccCCceeeccCCcccccc
Q 042634 144 LEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 144 l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
|+.|++++|.++ .+|..+. ++|+.|++++|++..-|
T Consensus 253 L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~ 288 (310)
T 4glp_A 253 LNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAP 288 (310)
T ss_dssp CCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCC
T ss_pred CCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCc
Confidence 999999999999 5677764 79999999999987544
No 294
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.87 E-value=1.1e-21 Score=201.17 Aligned_cols=179 Identities=23% Similarity=0.255 Sum_probs=152.7
Q ss_pred CeeecCCcccccCCcc-ccCCCCCCEeeeecccceeec--CcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEcc
Q 042634 1 AFTLVGNQFTGRIPGS-IGDLHKLQRLTLEMNKFWGEI--PSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLS 77 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~-~~~l~~L~~L~l~~n~~~~~~--p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~ 77 (427)
+|++++|.+++.+|.. +..+++|++|++++|.+++.. |..++.+++|++|++++|.+++..|..+..+++|++|+++
T Consensus 329 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 408 (606)
T 3t6q_A 329 HLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLA 408 (606)
T ss_dssp EEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECT
T ss_pred EEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECC
Confidence 3788999998877765 888999999999999998655 6788999999999999999997778888899999999999
Q ss_pred CccCcccCCCC-ccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCccccc---CCccccccccccceeeeeee
Q 042634 78 NNNLTGTTPTE-VIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQ---IPSSIGSCIRLEQLVMNGNF 153 (427)
Q Consensus 78 ~N~~~~~~p~~-~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~---~p~~~~~~~~l~~l~l~~n~ 153 (427)
+|++++..|.. +..+++| +.|++++|.+++..|..++.+++|+.|++++|++++. .+..+..+++|+.|++++|.
T Consensus 409 ~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 409 FTRLKVKDAQSPFQNLHLL-KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp TCCEECCTTCCTTTTCTTC-CEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSC
T ss_pred CCcCCCcccchhhhCcccC-CEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCc
Confidence 99998776644 7888888 6799999999888888899999999999999988862 33568889999999999999
Q ss_pred ccccCCCCcccccCCceeeccCCcccc
Q 042634 154 FRGNIPSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 154 l~~~~p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
+++..|..+..+++|+.|++++|++..
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 514 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTS 514 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCG
T ss_pred cCccChhhhccccCCCEEECCCCccCc
Confidence 998888888999999999999988754
No 295
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.87 E-value=1.8e-21 Score=173.33 Aligned_cols=150 Identities=22% Similarity=0.271 Sum_probs=101.0
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
+++++|.++ .+|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++|++|+|++|++
T Consensus 16 v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 566777777 5566544 5677777777777754444677777777777777777755566777777777777777777
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecc
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFR 155 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~ 155 (427)
++..+..|.++.+| ++|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+.
T Consensus 93 ~~l~~~~f~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 93 TELPKSLFEGLFSL-QLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CccCHhHccCCCCC-CEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 74444455666666 46777777776666666777777777777777776544445666666666666666665
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.86 E-value=1.8e-21 Score=184.47 Aligned_cols=176 Identities=22% Similarity=0.324 Sum_probs=145.3
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|++++..|..++.+++|++|+|++|+++ .+|..+. ++|++|++++|.+++..+..+..+++|++|++++|.
T Consensus 82 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~ 158 (332)
T 2ft3_A 82 ALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNP 158 (332)
T ss_dssp EEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCC
T ss_pred EEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCc
Confidence 3789999999888889999999999999999998 7887665 788888888888884333457778888888888888
Q ss_pred Cc--ccCCCCcccc--------------------ccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccc
Q 042634 81 LT--GTTPTEVIGL--------------------SSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSI 138 (427)
Q Consensus 81 ~~--~~~p~~~~~l--------------------~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~ 138 (427)
++ +..|..+..+ .+| ++|++++|.+++..|..+..+++|+.|++++|++++..|..+
T Consensus 159 l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L-~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 237 (332)
T 2ft3_A 159 LENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETL-NELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSL 237 (332)
T ss_dssp CBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSC-SCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGG
T ss_pred cccCCCCcccccCCccCEEECcCCCCCccCccccCCC-CEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHh
Confidence 85 2444444433 355 468888888887777889999999999999999997777789
Q ss_pred cccccccceeeeeeeccccCCCCcccccCCceeeccCCccccc
Q 042634 139 GSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 139 ~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~H 181 (427)
+.+++|+.|++++|.++ .+|..+..+++|+.|++++|.+..-
T Consensus 238 ~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 238 SFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp GGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBC
T ss_pred hCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCcc
Confidence 99999999999999999 6788899999999999999988653
No 297
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.86 E-value=2e-21 Score=188.44 Aligned_cols=104 Identities=28% Similarity=0.310 Sum_probs=62.0
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcC-ccCCCCCCeEEccCcc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSS-LGKCQNLILLDLSNNN 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~l~l~~N~ 80 (427)
|+|++|.+++..|..+..+++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|.. +..+++|++|++++|.
T Consensus 74 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~ 152 (390)
T 3o6n_A 74 LNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNN 152 (390)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCc
Confidence 566666666555556666666666666666666444445566666666666666666 45544 3556666666666666
Q ss_pred CcccCCCCccccccccceeeccCCcCc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLN 107 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~ 107 (427)
+++..|..+.++++| ++|++++|+++
T Consensus 153 l~~~~~~~~~~l~~L-~~L~l~~n~l~ 178 (390)
T 3o6n_A 153 LERIEDDTFQATTSL-QNLQLSSNRLT 178 (390)
T ss_dssp CCBCCTTTTSSCTTC-CEEECCSSCCS
T ss_pred cCccChhhccCCCCC-CEEECCCCcCC
Confidence 665555555556665 45666666554
No 298
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=8e-22 Score=174.05 Aligned_cols=167 Identities=23% Similarity=0.209 Sum_probs=126.5
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
++.+++.++ .+|..+ .++|++|+|++|++++..+..++++++|++|++++|++++..+..+..+++|++|++++|++
T Consensus 12 v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 88 (208)
T 2o6s_A 12 VECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL 88 (208)
T ss_dssp EECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcC
Confidence 567778887 566554 45888888888888854444578888888888888888844334467888888888888888
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~ 161 (427)
++..+..+.++.+| ++|++++|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+.+.
T Consensus 89 ~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~---- 163 (208)
T 2o6s_A 89 QSLPNGVFDKLTQL-KELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT---- 163 (208)
T ss_dssp CCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC----
T ss_pred CccCHhHhcCccCC-CEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC----
Confidence 86666667788888 6788888888865556678888888888888888865555678888888888888877653
Q ss_pred cccccCCceeeccCCccc
Q 042634 162 LSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 162 l~~l~~L~~L~L~~N~ll 179 (427)
++.++.|+++.|++.
T Consensus 164 ---~~~l~~L~~~~n~~~ 178 (208)
T 2o6s_A 164 ---CPGIRYLSEWINKHS 178 (208)
T ss_dssp ---TTTTHHHHHHHHHCT
T ss_pred ---CCCHHHHHHHHHhCC
Confidence 345667766666654
No 299
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.86 E-value=1.2e-21 Score=194.99 Aligned_cols=178 Identities=21% Similarity=0.192 Sum_probs=108.0
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|.+++..|..|..+++|+.|+|++|++++..+..++++++|+.|+|++|.+++..+..+..+++|++|++++|.
T Consensus 132 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 132 SLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp EEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT
T ss_pred EEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc
Confidence 36788888887777788888888888888888874333457778888888888888876555567777766666666665
Q ss_pred CcccCCCCc------------------------cccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCc
Q 042634 81 LTGTTPTEV------------------------IGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPS 136 (427)
Q Consensus 81 ~~~~~p~~~------------------------~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~ 136 (427)
+.+.+|... .++++| +.|+|++|++++..+..+..+++|+.|++++|++++..|.
T Consensus 212 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 290 (477)
T 2id5_A 212 YLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL-RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPY 290 (477)
T ss_dssp TCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC-CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTT
T ss_pred cccccCcccccCccccEEECcCCcccccCHHHhcCcccc-CeeECCCCcCCccChhhccccccCCEEECCCCccceECHH
Confidence 555555443 444444 3455555555444444445555555555555555544444
Q ss_pred cccccccccceeeeeeeccccCCCCcccccCCceeeccCCccc
Q 042634 137 SIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 137 ~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll 179 (427)
.+.++++|+.|++++|.+++..+..+..+++|+.|++++|.+.
T Consensus 291 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 291 AFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp TBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred HhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 5555555555555555555443344445555555555555543
No 300
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.86 E-value=7e-22 Score=202.59 Aligned_cols=176 Identities=20% Similarity=0.134 Sum_probs=136.0
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.
T Consensus 36 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~ 115 (606)
T 3vq2_A 36 NIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETK 115 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSC
T ss_pred EEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCc
Confidence 36788888887777778888888888888888886666778888888888888888886667778888888888888888
Q ss_pred CcccCCCCccccccccceeeccCCcCcC-CCCCCCcCCCCCCeEECcCCcccccCCcccccccccc----ceeeeeeecc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNG-PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLE----QLVMNGNFFR 155 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~----~l~l~~n~l~ 155 (427)
+++..|..++++.+| ++|++++|.+++ .+|..++++++|+.|++++|++++..|..++.+.+|+ .|++++|.++
T Consensus 116 l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~ 194 (606)
T 3vq2_A 116 LASLESFPIGQLITL-KKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID 194 (606)
T ss_dssp CCCSSSSCCTTCTTC-CEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCC
T ss_pred cccccccccCCCCCC-CEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcc
Confidence 876666778888888 578888888875 5688888888888888888888877777777777665 5888888887
Q ss_pred ccCCCCcccccCCceeeccCCcc
Q 042634 156 GNIPSSLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 156 ~~~p~~l~~l~~L~~L~L~~N~l 178 (427)
+..+..+... +|+.|++++|.+
T Consensus 195 ~~~~~~~~~~-~L~~L~L~~n~~ 216 (606)
T 3vq2_A 195 FIQDQAFQGI-KLHELTLRGNFN 216 (606)
T ss_dssp EECTTTTTTC-EEEEEEEESCCS
T ss_pred eeCcccccCc-eeeeeeccCCcc
Confidence 6555544444 788888887765
No 301
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.86 E-value=6.2e-22 Score=202.99 Aligned_cols=179 Identities=21% Similarity=0.190 Sum_probs=163.7
Q ss_pred CeeecCCcccccC--CccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcC-ccCCCCCCeEEcc
Q 042634 1 AFTLVGNQFTGRI--PGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSS-LGKCQNLILLDLS 77 (427)
Q Consensus 1 ~l~l~~n~l~~~~--p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~l~l~ 77 (427)
+|+|++|.+++.. |..+..+++|+.|++++|.+++..|..++.+++|+.|++++|.+++..|+. +..+++|++|+++
T Consensus 354 ~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 433 (606)
T 3t6q_A 354 ELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLS 433 (606)
T ss_dssp EEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECT
T ss_pred EEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECC
Confidence 4799999999776 788999999999999999999888889999999999999999999776655 8899999999999
Q ss_pred CccCcccCCCCccccccccceeeccCCcCcC---CCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeec
Q 042634 78 NNNLTGTTPTEVIGLSSLSIYLDLSQNQLNG---PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFF 154 (427)
Q Consensus 78 ~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~---~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l 154 (427)
+|.+++..|..+.++++| ++|++++|++++ ..+..+..+++|+.|++++|++++..|..++.+++|+.|++++|.+
T Consensus 434 ~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 512 (606)
T 3t6q_A 434 HSLLDISSEQLFDGLPAL-QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRL 512 (606)
T ss_dssp TCCCBTTCTTTTTTCTTC-CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCccCCcCHHHHhCCCCC-CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCcc
Confidence 999998899999999999 689999999986 3346799999999999999999988899999999999999999999
Q ss_pred cccCCCCcccccCCceeeccCCccccc
Q 042634 155 RGNIPSSLSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 155 ~~~~p~~l~~l~~L~~L~L~~N~ll~H 181 (427)
++..|..+..++.| .|++++|++..-
T Consensus 513 ~~~~~~~l~~l~~L-~L~L~~N~l~~~ 538 (606)
T 3t6q_A 513 TSSSIEALSHLKGI-YLNLASNHISII 538 (606)
T ss_dssp CGGGGGGGTTCCSC-EEECCSSCCCCC
T ss_pred CcCChhHhCccccc-EEECcCCccccc
Confidence 99999999999999 999999998754
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.86 E-value=1.9e-22 Score=193.00 Aligned_cols=176 Identities=22% Similarity=0.228 Sum_probs=144.7
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
.|+++|+++ .+|..+. ++|+.|+|++|++++..+..++++++|++|++++|.+++..|..+..+++|++|++++|++
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcC
Confidence 477888888 6787655 4899999999999854445789999999999999999976677788999999999999999
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCC--CCcCCCCCCeEECcCC-cccccCCccccccccccceeeeeeeccccC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPS--NFGILKNLGAIDISEN-KLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~--~~~~l~~L~~l~l~~n-~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~ 158 (427)
++..+..+.++++| ++|++++|+++ .+|. .+..+++|+.|++++| .+++..|..++++++|+.|++++|.+++..
T Consensus 113 ~~~~~~~~~~l~~L-~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 190 (353)
T 2z80_A 113 SNLSSSWFKPLSSL-TFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYE 190 (353)
T ss_dssp SSCCHHHHTTCTTC-SEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEEC
T ss_pred CcCCHhHhCCCccC-CEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccC
Confidence 85554557888888 67999999997 5555 7888999999999998 466555678888999999999999999888
Q ss_pred CCCcccccCCceeeccCCcccccc
Q 042634 159 PSSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 159 p~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
|..+..+++|+.|++++|.+...+
T Consensus 191 ~~~l~~l~~L~~L~l~~n~l~~~~ 214 (353)
T 2z80_A 191 PKSLKSIQNVSHLILHMKQHILLL 214 (353)
T ss_dssp TTTTTTCSEEEEEEEECSCSTTHH
T ss_pred HHHHhccccCCeecCCCCccccch
Confidence 888988999999999888875433
No 303
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.86 E-value=2e-21 Score=188.44 Aligned_cols=131 Identities=16% Similarity=0.150 Sum_probs=115.0
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|++++|.++...+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..++.+++|++|++++|.
T Consensus 49 ~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 128 (390)
T 3o6n_A 49 IVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERND 128 (390)
T ss_dssp EEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCc
Confidence 37899999995544557899999999999999996666789999999999999999997667779999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSG 132 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~ 132 (427)
++...+..+.++++| ++|++++|.+++..|..++.+++|+.|++++|++++
T Consensus 129 l~~l~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 179 (390)
T 3o6n_A 129 LSSLPRGIFHNTPKL-TTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 179 (390)
T ss_dssp CCCCCTTTTTTCTTC-CEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB
T ss_pred cCcCCHHHhcCCCCC-cEEECCCCccCccChhhccCCCCCCEEECCCCcCCc
Confidence 995444556889999 689999999998778889999999999999999884
No 304
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=7.3e-22 Score=185.41 Aligned_cols=173 Identities=19% Similarity=0.183 Sum_probs=147.6
Q ss_pred CeeecCCcccccCC----ccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCccc--CC--cCccCCCCCC
Q 042634 1 AFTLVGNQFTGRIP----GSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGS--IP--SSLGKCQNLI 72 (427)
Q Consensus 1 ~l~l~~n~l~~~~p----~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~--~p--~~~~~l~~L~ 72 (427)
+|+|++|.+++..| ..+..+++|++|+|++|++++..|..++.+++|++|+|++|++.+. +| ..+..+++|+
T Consensus 121 ~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~ 200 (310)
T 4glp_A 121 SLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQ 200 (310)
T ss_dssp SCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCC
T ss_pred EEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCC
Confidence 47999999998766 4567899999999999999977778899999999999999998753 33 3347899999
Q ss_pred eEEccCccCcccCCC----CccccccccceeeccCCcCcCCCCCCCcCC---CCCCeEECcCCcccccCCcccccccccc
Q 042634 73 LLDLSNNNLTGTTPT----EVIGLSSLSIYLDLSQNQLNGPLPSNFGIL---KNLGAIDISENKLSGQIPSSIGSCIRLE 145 (427)
Q Consensus 73 ~l~l~~N~~~~~~p~----~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l---~~L~~l~l~~n~~~~~~p~~~~~~~~l~ 145 (427)
+|++++|+++ .+|. .+.++.+| ++|+|++|++++..|..+..+ ++|+.|++++|+++ .+|..+. ++|+
T Consensus 201 ~L~Ls~N~l~-~l~~~~~~l~~~l~~L-~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~ 275 (310)
T 4glp_A 201 NLALRNTGME-TPTGVCAALAAAGVQP-HSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLR 275 (310)
T ss_dssp SCBCCSSCCC-CHHHHHHHHHHHTCCC-SSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCS
T ss_pred EEECCCCCCC-chHHHHHHHHhcCCCC-CEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCC
Confidence 9999999997 3333 24677889 679999999998889888887 69999999999999 7899885 7999
Q ss_pred ceeeeeeeccccCCCCcccccCCceeeccCCcccc
Q 042634 146 QLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 146 ~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
.|++++|.+++. |. +..+++|+.|++++|.+.+
T Consensus 276 ~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 276 VLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred EEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 999999999974 33 6788999999999998754
No 305
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.86 E-value=7.6e-22 Score=198.60 Aligned_cols=175 Identities=22% Similarity=0.326 Sum_probs=124.5
Q ss_pred eeecCCcccccCCccc-----cCCCCCCEeeeecccceeecC-cch-------------------------hccccCCEe
Q 042634 2 FTLVGNQFTGRIPGSI-----GDLHKLQRLTLEMNKFWGEIP-SSI-------------------------GNLTLLITL 50 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~-----~~l~~L~~L~l~~n~~~~~~p-~~~-------------------------~~l~~L~~L 50 (427)
|+|++|+++|.+|..+ +.+++|+.+++++|.+ .+| ..+ +.+++|++|
T Consensus 252 L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L 329 (520)
T 2z7x_B 252 FSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHL 329 (520)
T ss_dssp EEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEE
T ss_pred EEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEE
Confidence 6788888888888877 6676666666666666 344 111 566777778
Q ss_pred eeccccCcccCCcCccCCCCCCeEEccCccCcc--cCCCCccccccccceeeccCCcCcCCCCCC-CcCCCCCCeEECcC
Q 042634 51 NFAENMLEGSIPSSLGKCQNLILLDLSNNNLTG--TTPTEVIGLSSLSIYLDLSQNQLNGPLPSN-FGILKNLGAIDISE 127 (427)
Q Consensus 51 ~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~--~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~-~~~l~~L~~l~l~~ 127 (427)
++++|.+++.+|..++.+++|++|++++|++++ .+|..+.++++| ++|++++|++++.+|.. +..+++|+.|++++
T Consensus 330 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L-~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~ 408 (520)
T 2z7x_B 330 DFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSL-QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSS 408 (520)
T ss_dssp ECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTC-CEEECCSSCCBCCGGGCSCCCCTTCCEEECCS
T ss_pred EeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCC-CEEECCCCcCCcccccchhccCccCCEEECcC
Confidence 888888777677777777778888888887775 445566777777 56778888777656643 67777777777777
Q ss_pred CcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCCcccccc
Q 042634 128 NKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 128 n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
|++++.+|..+. ++|+.|++++|.++ .+|..+..+++|+.|++++|++..-|
T Consensus 409 N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~ 460 (520)
T 2z7x_B 409 NILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVP 460 (520)
T ss_dssp SCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCC
T ss_pred CCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccC
Confidence 777766666554 57777777777777 56666667777777777777766444
No 306
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.85 E-value=1.2e-21 Score=199.17 Aligned_cols=173 Identities=22% Similarity=0.257 Sum_probs=80.5
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeec--CcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEI--PSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~--p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
|++++|.+++.++. ..+++|+.|++++|++++.. |..+.++++|++|++++|.++ .+|+.+..+++|++|++++|
T Consensus 330 L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~l~~L~~L~l~~n 406 (570)
T 2z63_A 330 LTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHS 406 (570)
T ss_dssp EEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTS
T ss_pred EeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccc-cccccccccCCCCEEEccCC
Confidence 34455554444333 44445555555555444321 344444455555555555444 23333444444555555554
Q ss_pred cCcccCC-CCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCccc-ccCCccccccccccceeeeeeecccc
Q 042634 80 NLTGTTP-TEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLS-GQIPSSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 80 ~~~~~~p-~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~-~~~p~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
.+++..| ..+.++++| ++|++++|.+++..|..+..+++|+.|++++|+++ +.+|..++.+++|+.|++++|.+++.
T Consensus 407 ~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 485 (570)
T 2z63_A 407 NLKQMSEFSVFLSLRNL-IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 485 (570)
T ss_dssp EEESCTTSCTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEE
T ss_pred ccccccchhhhhcCCCC-CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccC
Confidence 4444333 234444444 34444444444444444444444444544444444 33444444444444444444444444
Q ss_pred CCCCcccccCCceeeccCCcc
Q 042634 158 IPSSLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 158 ~p~~l~~l~~L~~L~L~~N~l 178 (427)
.|..+..+++|+.|++++|++
T Consensus 486 ~~~~~~~l~~L~~L~l~~n~l 506 (570)
T 2z63_A 486 SPTAFNSLSSLQVLNMASNQL 506 (570)
T ss_dssp CTTTTTTCTTCCEEECCSSCC
T ss_pred ChhhhhcccCCCEEeCCCCcC
Confidence 444444444444444444444
No 307
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.85 E-value=2.7e-21 Score=205.51 Aligned_cols=177 Identities=23% Similarity=0.213 Sum_probs=156.1
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeec-CcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEI-PSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~-p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
+|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|..++++++|++|++++|
T Consensus 28 ~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n 107 (844)
T 3j0a_A 28 RLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFC 107 (844)
T ss_dssp EEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTC
T ss_pred EEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCC
Confidence 4799999999888999999999999999999766677 678999999999999999999888999999999999999999
Q ss_pred cCcccCCCC--ccccccccceeeccCCcCcCCCC-CCCcCCCCCCeEECcCCcccccCCcccccc--ccccceeeeeeec
Q 042634 80 NLTGTTPTE--VIGLSSLSIYLDLSQNQLNGPLP-SNFGILKNLGAIDISENKLSGQIPSSIGSC--IRLEQLVMNGNFF 154 (427)
Q Consensus 80 ~~~~~~p~~--~~~l~~l~~~L~l~~n~~~~~~p-~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~--~~l~~l~l~~n~l 154 (427)
.+++.+|.. +.++++| ++|+|++|.+++..+ ..++++++|+.|++++|.+++..|..++.+ ++|+.|++++|.+
T Consensus 108 ~l~~~~~~~~~~~~L~~L-~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l 186 (844)
T 3j0a_A 108 GLSDAVLKDGYFRNLKAL-TRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSL 186 (844)
T ss_dssp CCSSCCSTTCCCSSCSSC-CEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBS
T ss_pred CCCcccccCccccccCCC-CEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCcc
Confidence 999877654 8889999 689999999987655 578999999999999999998888888887 8999999999999
Q ss_pred cccCCCCcccccC------CceeeccCCcc
Q 042634 155 RGNIPSSLSSLRG------IENLDLSRNNF 178 (427)
Q Consensus 155 ~~~~p~~l~~l~~------L~~L~L~~N~l 178 (427)
.+..|..+..+.+ |+.|++++|.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l 216 (844)
T 3j0a_A 187 YSRVSVDWGKCMNPFRNMVLEILDVSGNGW 216 (844)
T ss_dssp CCCCCCCCCSSSCTTTTCCBSEEBCSSCCS
T ss_pred ccccccchhhcCCccccCceeEEecCCCcC
Confidence 9888887776665 89999998865
No 308
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.85 E-value=5.8e-21 Score=180.85 Aligned_cols=173 Identities=23% Similarity=0.303 Sum_probs=148.3
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcc--cCCcCccCCCCCCeEEccC
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEG--SIPSSLGKCQNLILLDLSN 78 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~l~l~~ 78 (427)
+|+|++|+++ .+|..+. ++|+.|++++|.+++..+..++++++|+.|++++|.++. ..|..+..+++|++|++++
T Consensus 104 ~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~ 180 (330)
T 1xku_A 104 RLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIAD 180 (330)
T ss_dssp EEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCS
T ss_pred EEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCC
Confidence 4789999999 6777665 799999999999986555678999999999999999963 6777889999999999999
Q ss_pred ccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccC
Q 042634 79 NNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158 (427)
Q Consensus 79 N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~ 158 (427)
|.++ .+|..+. ++| +.|++++|++++..|..+..+++|+.|++++|++++..+..++.+++|+.|++++|.++ .+
T Consensus 181 n~l~-~l~~~~~--~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 181 TNIT-TIPQGLP--PSL-TELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp SCCC-SCCSSCC--TTC-SEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SC
T ss_pred Cccc-cCCcccc--ccC-CEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cC
Confidence 9998 5665543 677 67999999998877889999999999999999999777778999999999999999998 57
Q ss_pred CCCcccccCCceeeccCCccccc
Q 042634 159 PSSLSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 159 p~~l~~l~~L~~L~L~~N~ll~H 181 (427)
|..+..+++|+.|++++|.+..-
T Consensus 256 p~~l~~l~~L~~L~l~~N~i~~~ 278 (330)
T 1xku_A 256 PGGLADHKYIQVVYLHNNNISAI 278 (330)
T ss_dssp CTTTTTCSSCCEEECCSSCCCCC
T ss_pred ChhhccCCCcCEEECCCCcCCcc
Confidence 88899999999999999988654
No 309
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.85 E-value=1.7e-21 Score=186.92 Aligned_cols=173 Identities=23% Similarity=0.197 Sum_probs=148.2
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchh-ccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIG-NLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+++++|+|+ .+|..+. ..++.|+|++|++++..+..+. ++++|++|+|++|++++..|..+..+++|++|+|++|+
T Consensus 23 l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 23 LSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp EECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 688999999 6787664 4689999999999965556676 99999999999999996666779999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccc----cccccccceeeeeeeccc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSI----GSCIRLEQLVMNGNFFRG 156 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~----~~~~~l~~l~l~~n~l~~ 156 (427)
+++..+..|.++.+| +.|+|++|++++..|..|..+++|+.|+|++|+++ .+|..+ ..+++|+.|++++|.+++
T Consensus 100 l~~~~~~~~~~l~~L-~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 100 LHTLDEFLFSDLQAL-EVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CCEECTTTTTTCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CCcCCHHHhCCCcCC-CEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 998777789999999 68999999999878899999999999999999999 577654 579999999999999997
Q ss_pred cCCCCcccccC--CceeeccCCccc
Q 042634 157 NIPSSLSSLRG--IENLDLSRNNFI 179 (427)
Q Consensus 157 ~~p~~l~~l~~--L~~L~L~~N~ll 179 (427)
..+..+..++. ++.|++++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 65566777776 478999999874
No 310
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.85 E-value=2.3e-21 Score=195.16 Aligned_cols=102 Identities=26% Similarity=0.215 Sum_probs=69.4
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|.. .+++|++|++++|++
T Consensus 26 L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l 102 (520)
T 2z7x_B 26 LNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAF 102 (520)
T ss_dssp EECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCC
T ss_pred EECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCcc
Confidence 567777777655566777777777777777777655667777777777777777777 56655 667777777777777
Q ss_pred cc-cCCCCccccccccceeeccCCcCc
Q 042634 82 TG-TTPTEVIGLSSLSIYLDLSQNQLN 107 (427)
Q Consensus 82 ~~-~~p~~~~~l~~l~~~L~l~~n~~~ 107 (427)
++ .+|..++++.+| ++|++++|.++
T Consensus 103 ~~~~~p~~~~~l~~L-~~L~L~~n~l~ 128 (520)
T 2z7x_B 103 DALPICKEFGNMSQL-KFLGLSTTHLE 128 (520)
T ss_dssp SSCCCCGGGGGCTTC-CEEEEEESSCC
T ss_pred ccccchhhhccCCcc-eEEEecCcccc
Confidence 65 356666666666 45666666553
No 311
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.85 E-value=2e-21 Score=197.39 Aligned_cols=174 Identities=21% Similarity=0.282 Sum_probs=95.4
Q ss_pred CeeecCCcccccCCccc-----cCCCC--------------------------CCEeeeecccceeecCcchhccccCCE
Q 042634 1 AFTLVGNQFTGRIPGSI-----GDLHK--------------------------LQRLTLEMNKFWGEIPSSIGNLTLLIT 49 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~-----~~l~~--------------------------L~~L~l~~n~~~~~~p~~~~~l~~L~~ 49 (427)
+|++++|.++|.+|..+ ..+++ |+.|++++|.+. .++ ..+.+++|++
T Consensus 280 ~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~-~~~-~~~~l~~L~~ 357 (562)
T 3a79_B 280 YLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFI-HMV-CPPSPSSFTF 357 (562)
T ss_dssp EEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCC-CCC-CCSSCCCCCE
T ss_pred EEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcc-ccc-CccCCCCceE
Confidence 36888888888888776 33332 333333333332 111 0145556666
Q ss_pred eeeccccCcccCCcCccCCCCCCeEEccCccCccc--CCCCccccccccceeeccCCcCcCCCCC-CCcCCCCCCeEECc
Q 042634 50 LNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGT--TPTEVIGLSSLSIYLDLSQNQLNGPLPS-NFGILKNLGAIDIS 126 (427)
Q Consensus 50 L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~--~p~~~~~l~~l~~~L~l~~n~~~~~~p~-~~~~l~~L~~l~l~ 126 (427)
|++++|.+++.+|..++.+++|++|++++|++++. +|..+.++++| ++|++++|++++.+|. .+..+++|+.|+++
T Consensus 358 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSL-ETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTC-CEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCC-CEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 66666666655555566666666666666666532 22345555555 4566666666553443 35555666666666
Q ss_pred CCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCCcccc
Q 042634 127 ENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 127 ~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
+|++++.+|..+. ++|+.|++++|.++ .+|..+..+++|+.|++++|++..
T Consensus 437 ~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 437 SNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp SSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC
T ss_pred CCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC
Confidence 6666555554443 45566666666655 345444455666666666665543
No 312
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.85 E-value=5e-22 Score=201.27 Aligned_cols=170 Identities=25% Similarity=0.252 Sum_probs=98.0
Q ss_pred eecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCc
Q 042634 3 TLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLT 82 (427)
Q Consensus 3 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~ 82 (427)
|.++|.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++.+++|++|++++|+++
T Consensus 11 ~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~ 87 (549)
T 2z81_A 11 DGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS 87 (549)
T ss_dssp ECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccC
Confidence 45556666 4555443 56666666666666544555666666666666666666555555666666666666666666
Q ss_pred ccCCCCccccccccceeeccCCcCcC-CCCCCCcCCCCCCeEECcCCcccccCC-ccccccccccceeeeeeeccccCCC
Q 042634 83 GTTPTEVIGLSSLSIYLDLSQNQLNG-PLPSNFGILKNLGAIDISENKLSGQIP-SSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 83 ~~~p~~~~~l~~l~~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~~~~~~p-~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+..|..+.++.+| ++|++++|++++ ..|..++++++|+.|++++|.+.+.+| ..++++++|+.|++++|.+++..|.
T Consensus 88 ~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 88 SLSSSWFGPLSSL-KYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp SCCHHHHTTCTTC-CEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred ccCHHHhccCCCC-cEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 5555555666666 456666666654 345556666666666666665333444 3556666666666666666655555
Q ss_pred CcccccCCceeeccCC
Q 042634 161 SLSSLRGIENLDLSRN 176 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N 176 (427)
.+..+++|+.|+++.|
T Consensus 167 ~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 167 SLKSIRDIHHLTLHLS 182 (549)
T ss_dssp TTTTCSEEEEEEEECS
T ss_pred hhhccccCceEecccC
Confidence 5554444444444333
No 313
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=7.8e-21 Score=170.31 Aligned_cols=147 Identities=23% Similarity=0.271 Sum_probs=68.3
Q ss_pred eecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCC-cCccCCCCCCeEEccCccC
Q 042634 3 TLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIP-SSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 3 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~l~l~~N~~ 81 (427)
+.+++.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|+++ .+| ..+..+++|++|+|++|++
T Consensus 25 ~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l 100 (229)
T 3e6j_A 25 DCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQL 100 (229)
T ss_dssp ECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred EccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCCCcCEEECCCCcC
Confidence 44444444 4444332 45555555555555433444555555555555555554 333 2234455555555555555
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecc
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFR 155 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~ 155 (427)
++..+..+..+.+| ++|+|++|+++ .+|..+..+++|+.|++++|++++..+..+..+++|+.|++++|.++
T Consensus 101 ~~l~~~~~~~l~~L-~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 101 TVLPSAVFDRLVHL-KELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCCCTTTTTTCTTC-CEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CccChhHhCcchhh-CeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 43333334444444 34444444444 44444444444444444444444322233444444444444444443
No 314
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.85 E-value=3.8e-21 Score=183.87 Aligned_cols=179 Identities=20% Similarity=0.194 Sum_probs=156.8
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcC-ccCCCCCCeEEccCc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSS-LGKCQNLILLDLSNN 79 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~l~l~~N 79 (427)
+|+|++|++++..+..+..+++|+.|+|++|++++..|..|+++++|++|+|++|.++ .+|.. +..+++|++|++++|
T Consensus 56 ~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n 134 (353)
T 2z80_A 56 SLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGN 134 (353)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTC
T ss_pred EEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCC
Confidence 4899999999776678999999999999999999777788999999999999999999 66665 899999999999999
Q ss_pred cCcccCC-CCccccccccceeeccCCc-CcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecccc
Q 042634 80 NLTGTTP-TEVIGLSSLSIYLDLSQNQ-LNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 80 ~~~~~~p-~~~~~l~~l~~~L~l~~n~-~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
++++..+ ..+.++++| ++|++++|. +++..|..++.+++|+.|++++|.+++..|..++.+++|+.|++++|.++..
T Consensus 135 ~l~~l~~~~~~~~l~~L-~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 213 (353)
T 2z80_A 135 PYKTLGETSLFSHLTKL-QILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILL 213 (353)
T ss_dssp CCSSSCSSCSCTTCTTC-CEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTH
T ss_pred CCcccCchhhhccCCCC-cEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccc
Confidence 9994444 378889999 689999995 6655678899999999999999999988899999999999999999999754
Q ss_pred CCCCcccccCCceeeccCCccccc
Q 042634 158 IPSSLSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 158 ~p~~l~~l~~L~~L~L~~N~ll~H 181 (427)
.+..+..+++|+.|++++|.+...
T Consensus 214 ~~~~~~~~~~L~~L~L~~n~l~~~ 237 (353)
T 2z80_A 214 LEIFVDVTSSVECLELRDTDLDTF 237 (353)
T ss_dssp HHHHHHHTTTEEEEEEESCBCTTC
T ss_pred hhhhhhhcccccEEECCCCccccc
Confidence 434455689999999999987653
No 315
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=7.5e-21 Score=169.29 Aligned_cols=158 Identities=20% Similarity=0.203 Sum_probs=141.4
Q ss_pred CCEeeeecccceeecCcchhccccCCEeeeccccCcccCCc-CccCCCCCCeEEccCccCcccCCCCccccccccceeec
Q 042634 23 LQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPS-SLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDL 101 (427)
Q Consensus 23 L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l 101 (427)
-+.+++++|.++ .+|..+. ..++.|+|++|.+++..|. .+..+++|++|++++|++++..+..+.++.+| ++|+|
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L-~~L~L 88 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGV-NEILL 88 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTC-CEEEC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCC-CEEEC
Confidence 468999999998 6998774 4568999999999965454 48899999999999999998888889999999 68999
Q ss_pred cCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCCccccc
Q 042634 102 SQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 102 ~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~H 181 (427)
++|++++..|..|..+++|+.|+|++|++++..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+.-.
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 99999977778899999999999999999988899999999999999999999998899999999999999999998644
Q ss_pred ccc
Q 042634 182 RNL 184 (427)
Q Consensus 182 pni 184 (427)
-.+
T Consensus 169 c~l 171 (220)
T 2v70_A 169 CYL 171 (220)
T ss_dssp GGG
T ss_pred Cch
Confidence 333
No 316
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=1.8e-20 Score=166.79 Aligned_cols=155 Identities=23% Similarity=0.291 Sum_probs=140.2
Q ss_pred CCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeecc
Q 042634 23 LQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLS 102 (427)
Q Consensus 23 L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~ 102 (427)
-+.+++++|.++ .+|..+. ++|+.|+|++|.+++..|..+..+++|++|+|++|++++..|..|.++.+| ++|+|+
T Consensus 13 ~~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L-~~L~Ls 88 (220)
T 2v9t_B 13 NNIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL-NSLVLY 88 (220)
T ss_dssp TTEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSC-CEEECC
T ss_pred CCEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCC-CEEECC
Confidence 378999999998 7998775 799999999999996656689999999999999999998889999999999 689999
Q ss_pred CCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCCccccc
Q 042634 103 QNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 103 ~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~H 181 (427)
+|+++...+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|.+++..+..+..+++|+.+++++|.+.-.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 89 GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 9999955455689999999999999999987788999999999999999999988888899999999999999988543
No 317
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.84 E-value=3.5e-21 Score=195.03 Aligned_cols=179 Identities=20% Similarity=0.171 Sum_probs=159.3
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|||++|++++..|..+.++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..++.+++|++|++++|.
T Consensus 30 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 109 (549)
T 2z81_A 30 SLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNP 109 (549)
T ss_dssp EEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCC
T ss_pred EEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCc
Confidence 48999999998888999999999999999999998777899999999999999999996555569999999999999999
Q ss_pred Ccc-cCCCCccccccccceeeccCCcCcCCCC-CCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccC
Q 042634 81 LTG-TTPTEVIGLSSLSIYLDLSQNQLNGPLP-SNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNI 158 (427)
Q Consensus 81 ~~~-~~p~~~~~l~~l~~~L~l~~n~~~~~~p-~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~ 158 (427)
+++ ..|..+.++.+| ++|++++|.+.+.+| ..++++++|+.|++++|.+++.+|..++.+++|+.|+++.|.+....
T Consensus 110 l~~~~~~~~~~~l~~L-~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~ 188 (549)
T 2z81_A 110 YQTLGVTSLFPNLTNL-QTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLL 188 (549)
T ss_dssp CSSSCSSCSCTTCTTC-CEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHH
T ss_pred ccccchhhhhhccCCc-cEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccc
Confidence 986 456788999999 689999999656666 68999999999999999999999999999999999999999987433
Q ss_pred CCCcccccCCceeeccCCcccc
Q 042634 159 PSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 159 p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
...+..+++|+.|++++|.+..
T Consensus 189 ~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 189 EIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp HHHHHSTTTBSEEEEESCBCTT
T ss_pred hhhHhhcccccEEEccCCcccc
Confidence 2233568999999999998865
No 318
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.84 E-value=5.8e-21 Score=194.05 Aligned_cols=103 Identities=24% Similarity=0.192 Sum_probs=76.4
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|.++ .+|.. .+++|++|++++|++
T Consensus 57 L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l 133 (562)
T 3a79_B 57 LSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDF 133 (562)
T ss_dssp EECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCC
T ss_pred EECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCc
Confidence 677788887666667788888888888888887666677777888888888888877 67766 677788888888887
Q ss_pred cc-cCCCCccccccccceeeccCCcCcC
Q 042634 82 TG-TTPTEVIGLSSLSIYLDLSQNQLNG 108 (427)
Q Consensus 82 ~~-~~p~~~~~l~~l~~~L~l~~n~~~~ 108 (427)
++ .+|..+.++.+| ++|++++|++++
T Consensus 134 ~~l~~p~~~~~l~~L-~~L~L~~n~l~~ 160 (562)
T 3a79_B 134 DVLPVCKEFGNLTKL-TFLGLSAAKFRQ 160 (562)
T ss_dssp SBCCCCGGGGGCTTC-CEEEEECSBCCT
T ss_pred cccCchHhhcccCcc-cEEecCCCcccc
Confidence 75 335677777777 567777777653
No 319
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.84 E-value=5.3e-21 Score=198.76 Aligned_cols=170 Identities=22% Similarity=0.288 Sum_probs=144.9
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCc-CccCCCCCCeEEccCc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPS-SLGKCQNLILLDLSNN 79 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~l~l~~N 79 (427)
+|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|+ .++.+++|++|++++|
T Consensus 29 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n 107 (680)
T 1ziw_A 29 VLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELHLMSN 107 (680)
T ss_dssp EEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSS
T ss_pred EEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEECCCC
Confidence 4789999999776678999999999999999999777888999999999999999999 6665 6899999999999999
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCcccc--ccccccceeeeeeecccc
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIG--SCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~--~~~~l~~l~l~~n~l~~~ 157 (427)
++++..|..+.++.+| ++|++++|.+++..|..++++++|+.|++++|.+++..|..++ .+++|+.|++++|.+++.
T Consensus 108 ~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 186 (680)
T 1ziw_A 108 SIQKIKNNPFVKQKNL-ITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEF 186 (680)
T ss_dssp CCCCCCSCTTTTCTTC-CEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCB
T ss_pred ccCccChhHccccCCC-CEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccccc
Confidence 9987777889999999 6899999999988888999999999999999999976666554 568999999999999988
Q ss_pred CCCCcccccCCceee
Q 042634 158 IPSSLSSLRGIENLD 172 (427)
Q Consensus 158 ~p~~l~~l~~L~~L~ 172 (427)
.|..+..+.+|+.++
T Consensus 187 ~~~~~~~l~~L~~L~ 201 (680)
T 1ziw_A 187 SPGCFHAIGRLFGLF 201 (680)
T ss_dssp CTTGGGGSSEECEEE
T ss_pred Chhhhhhhhhhhhhh
Confidence 887776654443333
No 320
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=8.2e-21 Score=167.53 Aligned_cols=158 Identities=26% Similarity=0.226 Sum_probs=108.2
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|++++..+..+..+++|++|+|++|++++..+..|+.+++|++|+|++|.+++..+..+..+++|++|++++|++
T Consensus 33 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 112 (208)
T 2o6s_A 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQL 112 (208)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcC
Confidence 67777777755555567777777777777777743334467777777777777777733333466777777777777777
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~ 161 (427)
++..+..+..+++| +.|++++|++++..+..+..+++|+.|++++|.+.+ .+++|+.|+++.|.++|.+|.+
T Consensus 113 ~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~ 184 (208)
T 2o6s_A 113 QSLPDGVFDKLTQL-KDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNS 184 (208)
T ss_dssp CCCCTTTTTTCTTC-CEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCT
T ss_pred cccCHhHhccCCcC-CEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeecc
Confidence 76555556677777 567777777775545556777777777777776653 4556777777777777777776
Q ss_pred cccccC
Q 042634 162 LSSLRG 167 (427)
Q Consensus 162 l~~l~~ 167 (427)
++.+..
T Consensus 185 ~~~l~~ 190 (208)
T 2o6s_A 185 AGSVAP 190 (208)
T ss_dssp TSSBCT
T ss_pred CccccC
Confidence 665543
No 321
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.84 E-value=2.9e-20 Score=193.15 Aligned_cols=178 Identities=21% Similarity=0.224 Sum_probs=134.2
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecC-cchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIP-SSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
|+|++|++++..|..+..+++|+.|+|++|.+++.+| ..+.++++|++|++++|.+++..|..+..+++|++|++++|.
T Consensus 386 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~ 465 (680)
T 1ziw_A 386 LNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVA 465 (680)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccc
Confidence 6778888887778888888888888888888887776 577888888888888888886666677777788888888877
Q ss_pred Cc--ccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccC----C----ccccccccccceeee
Q 042634 81 LT--GTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQI----P----SSIGSCIRLEQLVMN 150 (427)
Q Consensus 81 ~~--~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~----p----~~~~~~~~l~~l~l~ 150 (427)
++ +.+|..+.++.+| +.|++++|++++..|..+..+++|+.|++++|++++.. | ..+.++++|+.|+++
T Consensus 466 l~~~~~~p~~~~~l~~L-~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~ 544 (680)
T 1ziw_A 466 LKNVDSSPSPFQPLRNL-TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLE 544 (680)
T ss_dssp CBCTTCSSCTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECC
T ss_pred ccccccCCcccccCCCC-CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECC
Confidence 76 5667777777777 56888888887666666777888888888888777421 1 236677778888888
Q ss_pred eeeccccCCCCcccccCCceeeccCCcccc
Q 042634 151 GNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 151 ~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
+|.++...+..+..+++|+.|++++|++..
T Consensus 545 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~ 574 (680)
T 1ziw_A 545 SNGFDEIPVEVFKDLFELKIIDLGLNNLNT 574 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCHHHcccccCcceeECCCCCCCc
Confidence 887775444567777788888887777654
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.84 E-value=2.6e-21 Score=192.80 Aligned_cols=170 Identities=19% Similarity=0.155 Sum_probs=140.4
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|.+++.+| +..+++|++|+|++|.+++ +|. .++|++|++++|.+++..+. .+++|++|++++|.
T Consensus 62 ~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~~----~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~ 131 (487)
T 3oja_A 62 LLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LLV----GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNK 131 (487)
T ss_dssp EEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EEE----CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSC
T ss_pred EEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CCC----CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCC
Confidence 48999999997765 9999999999999999984 554 38899999999999955443 35789999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCc-CCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFG-ILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~-~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p 159 (427)
+++..|..+.++++| ..|+|++|.+++..|..+. .+++|+.|+|++|.+++. |. +..+++|+.|++++|.+++. |
T Consensus 132 l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~-~ 207 (487)
T 3oja_A 132 ITMLRDLDEGCRSRV-QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-G 207 (487)
T ss_dssp CCSGGGBCGGGGSSE-EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-C
T ss_pred CCCCCchhhcCCCCC-CEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCC-C
Confidence 998888888888888 6799999999887787776 789999999999999864 33 33588999999999999875 4
Q ss_pred CCcccccCCceeeccCCcccccccc
Q 042634 160 SSLSSLRGIENLDLSRNNFIRHRNL 184 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll~Hpni 184 (427)
..+..+++|+.|++++|.+..-|..
T Consensus 208 ~~~~~l~~L~~L~Ls~N~l~~lp~~ 232 (487)
T 3oja_A 208 PEFQSAAGVTWISLRNNKLVLIEKA 232 (487)
T ss_dssp GGGGGGTTCSEEECTTSCCCEECTT
T ss_pred HhHcCCCCccEEEecCCcCcccchh
Confidence 5588889999999999988764443
No 323
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.84 E-value=3.5e-21 Score=181.36 Aligned_cols=169 Identities=20% Similarity=0.248 Sum_probs=122.2
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|.+++..|..+..+++|+.|+|++|.+++.. + ++.+++|++|++++|.++ .+| ..++|++|++++|+
T Consensus 38 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~-~~~l~~L~~L~Ls~n~l~-~l~----~~~~L~~L~l~~n~ 110 (317)
T 3o53_A 38 ELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL-D-LESLSTLRTLDLNNNYVQ-ELL----VGPSIETLHAANNN 110 (317)
T ss_dssp EEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEE-E-ETTCTTCCEEECCSSEEE-EEE----ECTTCCEEECCSSC
T ss_pred EEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcch-h-hhhcCCCCEEECcCCccc-ccc----CCCCcCEEECCCCc
Confidence 4799999999877788999999999999999998644 3 999999999999999998 444 23677777777777
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCcccc-ccccccceeeeeeeccccCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIG-SCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~-~~~~l~~l~l~~n~l~~~~p 159 (427)
+++..+.. +++| ++|++++|++++..|..++.+++|+.|++++|.+++..|..+. .+++|+.|++++|.+++. +
T Consensus 111 l~~~~~~~---~~~L-~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~ 185 (317)
T 3o53_A 111 ISRVSCSR---GQGK-KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (317)
T ss_dssp CSEEEECC---CSSC-EEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred cCCcCccc---cCCC-CEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c
Confidence 77555443 3455 5677777777765566677777777777777777765555553 567777777777777654 2
Q ss_pred CCcccccCCceeeccCCcccccc
Q 042634 160 SSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
....+++|+.|++++|.+..-|
T Consensus 186 -~~~~l~~L~~L~Ls~N~l~~l~ 207 (317)
T 3o53_A 186 -GQVVFAKLKTLDLSSNKLAFMG 207 (317)
T ss_dssp -CCCCCTTCCEEECCSSCCCEEC
T ss_pred -cccccccCCEEECCCCcCCcch
Confidence 2234667777777777665443
No 324
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.84 E-value=8.1e-21 Score=193.14 Aligned_cols=173 Identities=21% Similarity=0.191 Sum_probs=139.7
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|||++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..++.+++|++|++++|++
T Consensus 33 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 112 (570)
T 2z63_A 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112 (570)
T ss_dssp EECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccccccc
Confidence 78888888877777888888888888888888865566788888888888888888866667788888888888888888
Q ss_pred cccCCCCccccccccceeeccCCcCcC-CCCCCCcCCCCCCeEECcCCcccccCCccccccccc----cceeeeeeeccc
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNG-PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRL----EQLVMNGNFFRG 156 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l----~~l~l~~n~l~~ 156 (427)
++..+..++++.+| ++|++++|.+++ .+|..++++++|+.|++++|++++..|..++.+.+| ..+++++|.+++
T Consensus 113 ~~l~~~~~~~l~~L-~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~ 191 (570)
T 2z63_A 113 ASLENFPIGHLKTL-KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF 191 (570)
T ss_dssp CCSTTCSCTTCTTC-CEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCE
T ss_pred ccCCCccccccccc-cEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCcee
Confidence 86555567888888 678888888876 478888888888888888888887667778888887 778888888887
Q ss_pred cCCCCcccccCCceeeccCC
Q 042634 157 NIPSSLSSLRGIENLDLSRN 176 (427)
Q Consensus 157 ~~p~~l~~l~~L~~L~L~~N 176 (427)
..|..+..+ +|+.+++++|
T Consensus 192 ~~~~~~~~~-~L~~L~l~~n 210 (570)
T 2z63_A 192 IQPGAFKEI-RLHKLTLRNN 210 (570)
T ss_dssp ECTTTTTTC-EEEEEEEESC
T ss_pred cCHHHhccC-cceeEecccc
Confidence 777666655 6788877766
No 325
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.83 E-value=1e-20 Score=177.30 Aligned_cols=167 Identities=25% Similarity=0.374 Sum_probs=142.5
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|++++|.++ .+| .+..+++|+.|+|++|.++ .+|. ++.+++|++|+|++|.++ .+| .+..+++|++|++++|+
T Consensus 45 ~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~l~~n~ 118 (308)
T 1h6u_A 45 TLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDLTSTQ 118 (308)
T ss_dssp EEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEECTTSC
T ss_pred EEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCC-Cch-hhcCCCCCCEEECCCCC
Confidence 3789999998 456 6899999999999999998 5666 999999999999999999 555 78899999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+++ +|. +..+++| ++|++++|++++ ++. ++.+++|+.|++++|++++ ++. +..+++|+.|++++|.+++..+
T Consensus 119 l~~-~~~-l~~l~~L-~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~- 190 (308)
T 1h6u_A 119 ITD-VTP-LAGLSNL-QVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP- 190 (308)
T ss_dssp CCC-CGG-GTTCTTC-CEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-
T ss_pred CCC-chh-hcCCCCC-CEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh-
Confidence 985 443 7888999 689999999985 443 8899999999999999984 555 8899999999999999987543
Q ss_pred CcccccCCceeeccCCcccccc
Q 042634 161 SLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
+..+++|+.|++++|.+..-+
T Consensus 191 -l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 191 -LASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp -GGGCTTCCEEECTTSCCCBCG
T ss_pred -hcCCCCCCEEEccCCccCccc
Confidence 888999999999999887655
No 326
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.83 E-value=1.6e-20 Score=169.47 Aligned_cols=169 Identities=18% Similarity=0.175 Sum_probs=144.8
Q ss_pred CeeecCCc-ccccCCccccCCCCCCEeeeec-ccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCC---eEE
Q 042634 1 AFTLVGNQ-FTGRIPGSIGDLHKLQRLTLEM-NKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLI---LLD 75 (427)
Q Consensus 1 ~l~l~~n~-l~~~~p~~~~~l~~L~~L~l~~-n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~---~l~ 75 (427)
+|+|++|+ +++..+..|..+++|++|+|++ |++++..|..|.++++|++|++++|.++ .+|. +..+++|+ +|+
T Consensus 59 ~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~~L~ 136 (239)
T 2xwt_C 59 RIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPD-LTKVYSTDIFFILE 136 (239)
T ss_dssp EEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCC-SCCC-CTTCCBCCSEEEEE
T ss_pred EEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCc-cccc-cccccccccccEEE
Confidence 47999997 8866667899999999999998 9999555568999999999999999999 5887 88899998 999
Q ss_pred ccCc-cCcccCCCCccccccccc-eeeccCCcCcCCCCCCCcCCCCCCeEECcCCc-ccccCCcccccc-ccccceeeee
Q 042634 76 LSNN-NLTGTTPTEVIGLSSLSI-YLDLSQNQLNGPLPSNFGILKNLGAIDISENK-LSGQIPSSIGSC-IRLEQLVMNG 151 (427)
Q Consensus 76 l~~N-~~~~~~p~~~~~l~~l~~-~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~-~~~~~p~~~~~~-~~l~~l~l~~ 151 (427)
+++| .+++..+..+.++.+| + .|++++|.++ .+|......++|+.|++++|+ +++..+..+..+ ++|+.|++++
T Consensus 137 l~~N~~l~~i~~~~~~~l~~L-~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~ 214 (239)
T 2xwt_C 137 ITDNPYMTSIPVNAFQGLCNE-TLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQ 214 (239)
T ss_dssp EESCTTCCEECTTTTTTTBSS-EEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTT
T ss_pred CCCCcchhhcCcccccchhcc-eeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCC
Confidence 9999 9997777779999999 6 7999999998 677665555899999999995 986556678899 9999999999
Q ss_pred eeccccCCCCcccccCCceeeccCC
Q 042634 152 NFFRGNIPSSLSSLRGIENLDLSRN 176 (427)
Q Consensus 152 n~l~~~~p~~l~~l~~L~~L~L~~N 176 (427)
|.+++. |.. .+++|+.|+++++
T Consensus 215 N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 215 TSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp CCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CccccC-Chh--HhccCceeeccCc
Confidence 999965 443 5778888887764
No 327
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=4.4e-20 Score=165.36 Aligned_cols=154 Identities=22% Similarity=0.231 Sum_probs=139.6
Q ss_pred CCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeecc
Q 042634 23 LQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLS 102 (427)
Q Consensus 23 L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~ 102 (427)
.+.++.+++.++ .+|..+. ++|++|+|++|.+++..|..+..+++|++|+|++|+++...+..+.++++| +.|+|+
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L-~~L~Ls 96 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL-TVLDLG 96 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECC
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCc-CEEECC
Confidence 578999999998 8998775 999999999999997778889999999999999999986666778899999 689999
Q ss_pred CCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCCccccc
Q 042634 103 QNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 103 ~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~H 181 (427)
+|++++..+..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.-.
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 99999766677899999999999999999 8999999999999999999999987777899999999999999987543
No 328
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.83 E-value=2.5e-20 Score=174.68 Aligned_cols=148 Identities=23% Similarity=0.346 Sum_probs=66.4
Q ss_pred CCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccce
Q 042634 19 DLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIY 98 (427)
Q Consensus 19 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~ 98 (427)
.+++|+.|++++|.++ .+| .+..+++|++|+|++|.++ .+|+ +..+++|++|++++|++++ ++ .+..+.+| +.
T Consensus 39 ~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L-~~ 111 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSI-KT 111 (308)
T ss_dssp HHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTC-CE
T ss_pred HcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCC-CE
Confidence 3444444555444444 333 3444444555555555444 3333 4444445555555554442 22 34444444 34
Q ss_pred eeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCCcc
Q 042634 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 99 L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l 178 (427)
|++++|++++ +|. +..+++|+.|++++|++++ ++. ++.+++|+.|++++|.+++..+ +..+++|+.|++++|.+
T Consensus 112 L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCcc
Confidence 4555554442 222 4444445555555544442 222 4444444445555444443221 44444444444444444
Q ss_pred c
Q 042634 179 I 179 (427)
Q Consensus 179 l 179 (427)
.
T Consensus 186 ~ 186 (308)
T 1h6u_A 186 S 186 (308)
T ss_dssp C
T ss_pred C
Confidence 3
No 329
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.83 E-value=2.3e-20 Score=163.21 Aligned_cols=155 Identities=16% Similarity=0.215 Sum_probs=127.7
Q ss_pred cccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccc
Q 042634 16 SIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSL 95 (427)
Q Consensus 16 ~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l 95 (427)
....+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+ +.+..+++|++|++++|++++..|..+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3467788999999999998 677 6888999999999999665 43 478888999999999999987778888888888
Q ss_pred cceeeccCCcCcCCCCCCCcCCCCCCeEECcCCc-ccccCCccccccccccceeeeeeeccccCCCCcccccCCceeecc
Q 042634 96 SIYLDLSQNQLNGPLPSNFGILKNLGAIDISENK-LSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLS 174 (427)
Q Consensus 96 ~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~-~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~ 174 (427)
++|++++|++++..|..++.+++|+.|++++|+ ++ .+| .+..+++|+.|++++|.+++. + .+..+++|+.|+++
T Consensus 115 -~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~ 189 (197)
T 4ezg_A 115 -TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAF 189 (197)
T ss_dssp -CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEEC
T ss_pred -CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEee
Confidence 679999999987778888889999999999998 55 666 688889999999999998863 3 78888899999998
Q ss_pred CCccc
Q 042634 175 RNNFI 179 (427)
Q Consensus 175 ~N~ll 179 (427)
+|++.
T Consensus 190 ~N~i~ 194 (197)
T 4ezg_A 190 SQTIG 194 (197)
T ss_dssp BC---
T ss_pred CcccC
Confidence 88763
No 330
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.82 E-value=3.2e-20 Score=190.90 Aligned_cols=157 Identities=20% Similarity=0.229 Sum_probs=92.5
Q ss_pred CcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCC
Q 042634 7 NQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTP 86 (427)
Q Consensus 7 n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p 86 (427)
.+|+ .+|..+- +++++|||++|+|++..|.+|+++++|++|+|++|++++..|.+|.++++|++|+|++|++++..+
T Consensus 41 ~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~ 117 (635)
T 4g8a_A 41 LNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLAL 117 (635)
T ss_dssp SCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECG
T ss_pred CCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCH
Confidence 3445 4454332 256666666666664333456666666666666666663334456666666666666666665555
Q ss_pred CCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccc-cCCccccccccccceeeeeeeccccCCCCcccc
Q 042634 87 TEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSG-QIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSL 165 (427)
Q Consensus 87 ~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~-~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l 165 (427)
..|.++.+| ++|+|++|++++..+..|+++++|+.|++++|.+++ .+|..++.+++|+.|++++|.+++..+..+..+
T Consensus 118 ~~f~~L~~L-~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L 196 (635)
T 4g8a_A 118 GAFSGLSSL-QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 196 (635)
T ss_dssp GGGTTCTTC-CEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHH
T ss_pred HHhcCCCCC-CEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccch
Confidence 556666666 456666666664444556666666666666666653 345556666666666666666666555555444
Q ss_pred cC
Q 042634 166 RG 167 (427)
Q Consensus 166 ~~ 167 (427)
.+
T Consensus 197 ~~ 198 (635)
T 4g8a_A 197 HQ 198 (635)
T ss_dssp HT
T ss_pred hh
Confidence 43
No 331
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.82 E-value=4.7e-20 Score=195.99 Aligned_cols=174 Identities=23% Similarity=0.246 Sum_probs=157.4
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccC-CcCccCCCCCCeEEccCcc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSI-PSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~l~l~~N~ 80 (427)
.|.++++++ .+|. -.++|+.|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..+.++++|++|+|++|.
T Consensus 9 ~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 9 AFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 578899999 6676 5689999999999999888899999999999999999777777 6789999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCC--CcCCCCCCeEECcCCcccccCC-ccccccccccceeeeeeecccc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSN--FGILKNLGAIDISENKLSGQIP-SSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~--~~~l~~L~~l~l~~n~~~~~~p-~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
+++..|..+.++.+| ++|+|++|.+++.+|.. ++++++|+.|++++|.+++..| ..++++++|+.|++++|.+++.
T Consensus 85 l~~~~p~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHL-FELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCEECTTSSCSCSSC-CCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred CcccCHhHccCCccc-CEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999 68999999999877765 9999999999999999997655 5799999999999999999998
Q ss_pred CCCCcccc--cCCceeeccCCcccc
Q 042634 158 IPSSLSSL--RGIENLDLSRNNFIR 180 (427)
Q Consensus 158 ~p~~l~~l--~~L~~L~L~~N~ll~ 180 (427)
.+..+..+ ++|+.|+++.|.+..
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~ 188 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYS 188 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCC
T ss_pred CHHHcccccCCccceEECCCCcccc
Confidence 88999888 899999999987643
No 332
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=2.8e-20 Score=172.92 Aligned_cols=166 Identities=22% Similarity=0.342 Sum_probs=136.9
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|++++|.++ .+| .+..+++|+.|+|++|++++ +++ ++++++|++|++++|.++ .+| .+..+++|++|++++|+
T Consensus 50 ~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~-~~~-~l~~l~~L~~L~L~~n~ 123 (291)
T 1h6t_A 50 QIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLSLEHNG 123 (291)
T ss_dssp EEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEEECTTSC
T ss_pred EEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCC-CCh-hhccCCCCCEEECCCCc
Confidence 3788899988 444 48889999999999999984 555 899999999999999998 455 48889999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+++ + ..+..+++| +.|++++|++++ + ..++.+++|+.|++++|++++ ++. +..+++|+.|++++|.+++. +
T Consensus 124 i~~-~-~~l~~l~~L-~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~N~l~~-~~~-l~~l~~L~~L~L~~N~i~~l-~- 194 (291)
T 1h6t_A 124 ISD-I-NGLVHLPQL-ESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISD-IVP-LAGLTKLQNLYLSKNHISDL-R- 194 (291)
T ss_dssp CCC-C-GGGGGCTTC-CEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCBC-G-
T ss_pred CCC-C-hhhcCCCCC-CEEEccCCcCCc-c-hhhccCCCCCEEEccCCcccc-chh-hcCCCccCEEECCCCcCCCC-h-
Confidence 985 3 357788888 679999999985 3 678889999999999999985 444 88899999999999999864 3
Q ss_pred CcccccCCceeeccCCccccc
Q 042634 161 SLSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~H 181 (427)
.+..+++|+.|++++|.+...
T Consensus 195 ~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 195 ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp GGTTCTTCSEEEEEEEEEECC
T ss_pred hhccCCCCCEEECcCCcccCC
Confidence 488889999999998887553
No 333
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.82 E-value=2.2e-20 Score=192.05 Aligned_cols=174 Identities=21% Similarity=0.184 Sum_probs=144.2
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|||++|+|++..|..|.++++|++|+|++|+|++..|..|++|++|++|+|++|++++..|..|.++++|++|++++|+
T Consensus 56 ~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~ 135 (635)
T 4g8a_A 56 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETN 135 (635)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSC
T ss_pred EEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCc
Confidence 48999999997777889999999999999999996555679999999999999999994444568999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcC-CCCCCCcCCCCCCeEECcCCcccccCCcccccccccc----ceeeeeeecc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNG-PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLE----QLVMNGNFFR 155 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~-~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~----~l~l~~n~l~ 155 (427)
+++..+..++++++| ++|+|++|.+++ .+|..++.+++|+.|++++|++++..|..+..+.++. .++++.|.++
T Consensus 136 l~~l~~~~~~~L~~L-~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~ 214 (635)
T 4g8a_A 136 LASLENFPIGHLKTL-KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 214 (635)
T ss_dssp CCCSTTCCCTTCTTC-CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred CCCCChhhhhcCccc-CeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCccc
Confidence 997777789999999 689999999975 5688999999999999999999988888888776655 4677788887
Q ss_pred ccCCCCcccccCCceeeccCC
Q 042634 156 GNIPSSLSSLRGIENLDLSRN 176 (427)
Q Consensus 156 ~~~p~~l~~l~~L~~L~L~~N 176 (427)
...+..+.. ..+..+++..|
T Consensus 215 ~i~~~~~~~-~~~~~l~l~~n 234 (635)
T 4g8a_A 215 FIQPGAFKE-IRLHKLTLRNN 234 (635)
T ss_dssp EECTTTTTT-CEEEEEEEESC
T ss_pred ccCcccccc-hhhhhhhhhcc
Confidence 654443332 23344444443
No 334
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.82 E-value=2e-20 Score=163.56 Aligned_cols=148 Identities=21% Similarity=0.213 Sum_probs=128.7
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|++++|+++ .+| .+..+++|+.|++++|.++ . ++.++.+++|++|++++|.+++..|..++.+++|++|++++|+
T Consensus 48 ~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 123 (197)
T 4ezg_A 48 YITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSA 123 (197)
T ss_dssp EEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSB
T ss_pred EEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCc
Confidence 3789999999 667 7999999999999999776 3 4579999999999999999998889999999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRG 156 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~ 156 (427)
+++..|..+..+++| ++|++++|++.+.+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|.+.+
T Consensus 124 i~~~~~~~l~~l~~L-~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 124 HDDSILTKINTLPKV-NSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CBGGGHHHHTTCSSC-CEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred cCcHhHHHHhhCCCC-CEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 998888889999999 689999998334676 78999999999999999984 66 88899999999999999864
No 335
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.82 E-value=1.6e-21 Score=196.11 Aligned_cols=129 Identities=16% Similarity=0.196 Sum_probs=109.4
Q ss_pred cccccchhhhccccccCCCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 179 IRHRNLVKIITSCASVDFQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 179 l~Hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
++||||++....+.. ....++||||+++++|.+++.. +..++.|+++||+||| ++||+||
T Consensus 396 l~h~nIv~~~~~~~~-----~~~~~lVmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH---~~gIiHr 455 (540)
T 3en9_A 396 VKDFGIPAPYIFDVD-----LDNKRIMMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLH---KNDVIHN 455 (540)
T ss_dssp GGGGTCCCCCEEEEE-----TTTTEEEEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHH---HTTEECT
T ss_pred cCCCCcCceEEEEEe-----CCccEEEEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHH---HCcCccC
Confidence 579999944333222 3456999999999999999864 4579999999999999 8999999
Q ss_pred cccCCceeeCCCCceEecccccccccCCc-------------CCCccccccccccCC--CCcCccccchhHHHHHHHHHh
Q 042634 259 DLKPSNVLLDGELTAHVGDFGLAKFLPEA-------------TNNFFNFQIAEYGMG--SEVSTSGDVYSFGILLLETFT 323 (427)
Q Consensus 259 Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-------------~~~~~~y~aPE~~~~--~~~~~~~DiwS~G~vl~ell~ 323 (427)
||||+|||++. .+||+|||+|+..... ..||+.|+|||++.. ..|+..+|+||..+-..+-+.
T Consensus 456 DiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~ 533 (540)
T 3en9_A 456 DLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVE 533 (540)
T ss_dssp TCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred CCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999 9999999999987552 268899999999987 668889999999999988888
Q ss_pred CCCCCC
Q 042634 324 GKRPTN 329 (427)
Q Consensus 324 g~~pf~ 329 (427)
++.+|.
T Consensus 534 ~r~rY~ 539 (540)
T 3en9_A 534 RRARYV 539 (540)
T ss_dssp TCSCCC
T ss_pred hccccC
Confidence 887764
No 336
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.81 E-value=2.2e-20 Score=175.80 Aligned_cols=168 Identities=20% Similarity=0.180 Sum_probs=140.3
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|++++..| +..+++|++|+|++|+++ .+|. +++|+.|++++|++++..+. .+++|++|++++|+
T Consensus 62 ~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~-~l~~----~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~ 131 (317)
T 3o53_A 62 LLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-ELLV----GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNK 131 (317)
T ss_dssp EEECTTSCCEEEEE--ETTCTTCCEEECCSSEEE-EEEE----CTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSC
T ss_pred EEECCCCcCCcchh--hhhcCCCCEEECcCCccc-cccC----CCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCC
Confidence 47999999997654 999999999999999998 4553 48999999999999954433 36789999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCC-cCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNF-GILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~-~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p 159 (427)
+++..|..+..+++| ++|++++|.+++..|..+ ..+++|+.|++++|.+++ +|.. ..+++|+.|++++|.+++. |
T Consensus 132 l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~-~~l~~L~~L~Ls~N~l~~l-~ 207 (317)
T 3o53_A 132 ITMLRDLDEGCRSRV-QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKGQ-VVFAKLKTLDLSSNKLAFM-G 207 (317)
T ss_dssp CCSGGGBCTGGGSSE-EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EECC-CCCTTCCEEECCSSCCCEE-C
T ss_pred CCCccchhhhccCCC-CEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-cccc-cccccCCEEECCCCcCCcc-h
Confidence 998878888889999 689999999987666666 478999999999999985 4443 3589999999999999964 5
Q ss_pred CCcccccCCceeeccCCcccccc
Q 042634 160 SSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
..+..+++|+.|++++|.+..-|
T Consensus 208 ~~~~~l~~L~~L~L~~N~l~~l~ 230 (317)
T 3o53_A 208 PEFQSAAGVTWISLRNNKLVLIE 230 (317)
T ss_dssp GGGGGGTTCSEEECTTSCCCEEC
T ss_pred hhhcccCcccEEECcCCcccchh
Confidence 56889999999999999886533
No 337
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=3.6e-20 Score=169.51 Aligned_cols=165 Identities=23% Similarity=0.277 Sum_probs=141.4
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
+++++|.+++. + .+..+++|+.|++++|.++ .+| .++.+++|++|+|++|+++ .+|+ +..+++|++|++++|++
T Consensus 24 l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L~L~~N~l 97 (263)
T 1xeu_A 24 QNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNRNRL 97 (263)
T ss_dssp HHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCC
T ss_pred HHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccC-CChh-hccCCCCCEEECCCCcc
Confidence 46788898844 4 6889999999999999998 687 7999999999999999999 5665 99999999999999999
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~ 161 (427)
++ +|... . .+| +.|++++|++++ ++ .++.+++|+.|++++|++++ +| .++.+++|+.|++++|.+++. ..
T Consensus 98 ~~-l~~~~-~-~~L-~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~--~~ 167 (263)
T 1xeu_A 98 KN-LNGIP-S-ACL-SRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT--GG 167 (263)
T ss_dssp SC-CTTCC-C-SSC-CEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC--TT
T ss_pred CC-cCccc-c-Ccc-cEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch--HH
Confidence 85 44432 2 778 689999999985 44 68999999999999999995 55 788999999999999999976 67
Q ss_pred cccccCCceeeccCCcccccc
Q 042634 162 LSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 162 l~~l~~L~~L~L~~N~ll~Hp 182 (427)
+..+++|+.|++++|.+...|
T Consensus 168 l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 168 LTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp STTCCCCCEEEEEEEEEECCC
T ss_pred hccCCCCCEEeCCCCcccCCc
Confidence 889999999999999876543
No 338
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.1e-19 Score=184.79 Aligned_cols=166 Identities=22% Similarity=0.344 Sum_probs=145.7
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
.|+|++|.++ .+| .+..+++|+.|+|++|++++ +|+ ++.+++|+.|+|++|.++ .+| .+..+++|++|+|++|.
T Consensus 47 ~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~-~~~-l~~l~~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L~Ls~N~ 120 (605)
T 1m9s_A 47 QIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LTNLKNLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHNG 120 (605)
T ss_dssp CCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCC-CCT-TSTTCTTCCEEECTTSC
T ss_pred EEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCC-Chh-hccCCCCCEEECcCCCCC-CCh-hhccCCCCCEEEecCCC
Confidence 4789999998 455 58999999999999999985 555 999999999999999999 555 79999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+++ + ..+..+++| +.|+|++|++++. ..++.+++|+.|+|++|++++..| +..+++|+.|++++|.+++. .
T Consensus 121 l~~-l-~~l~~l~~L-~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~ 191 (605)
T 1m9s_A 121 ISD-I-NGLVHLPQL-ESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--R 191 (605)
T ss_dssp CCC-C-GGGGGCTTC-SEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--G
T ss_pred CCC-C-ccccCCCcc-CEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--h
Confidence 985 4 358889999 6899999999854 788999999999999999996555 89999999999999999974 4
Q ss_pred CcccccCCceeeccCCccccc
Q 042634 161 SLSSLRGIENLDLSRNNFIRH 181 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~H 181 (427)
.+..+++|+.|++++|.+...
T Consensus 192 ~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 192 ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GGTTCTTCSEEECCSEEEECC
T ss_pred HHccCCCCCEEEccCCcCcCC
Confidence 688999999999999988553
No 339
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=7.4e-20 Score=175.41 Aligned_cols=154 Identities=22% Similarity=0.173 Sum_probs=132.9
Q ss_pred CeeecCCcccccCCcccc-CCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCc
Q 042634 1 AFTLVGNQFTGRIPGSIG-DLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~-~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
+|+|++|+|++..+..+. .+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..+..+++|++|+|++|
T Consensus 43 ~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 122 (361)
T 2xot_A 43 LLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNN 122 (361)
T ss_dssp EEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCC
Confidence 389999999987777787 9999999999999999666678999999999999999999655567999999999999999
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCCC-C---cCCCCCCeEECcCCcccccCCcccccccc--ccceeeeeee
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSN-F---GILKNLGAIDISENKLSGQIPSSIGSCIR--LEQLVMNGNF 153 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~-~---~~l~~L~~l~l~~n~~~~~~p~~~~~~~~--l~~l~l~~n~ 153 (427)
++++..|..+.++.+| +.|+|++|+++ .+|.. + ..+++|+.|+|++|++++..+..+..++. ++.|++++|.
T Consensus 123 ~i~~~~~~~~~~l~~L-~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 123 HIVVVDRNAFEDMAQL-QKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp CCCEECTTTTTTCTTC-CEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred cccEECHHHhCCcccC-CEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 9998889999999999 68999999998 46655 4 67999999999999999533356777776 4889999998
Q ss_pred ccc
Q 042634 154 FRG 156 (427)
Q Consensus 154 l~~ 156 (427)
+..
T Consensus 201 ~~C 203 (361)
T 2xot_A 201 LEC 203 (361)
T ss_dssp EEC
T ss_pred ccC
Confidence 863
No 340
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.80 E-value=4e-19 Score=178.91 Aligned_cols=153 Identities=27% Similarity=0.355 Sum_probs=76.8
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|+|++ +|..+. ++|+.|+|++|+++ .+| +.+++|++|+|++|.+++ +|. +.. +|++|++++|++
T Consensus 64 L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l 132 (571)
T 3cvr_A 64 LQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQL 132 (571)
T ss_dssp EECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCC
T ss_pred EEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcC
Confidence 5666666664 555442 55666666666665 455 335555555555555553 554 433 455555555555
Q ss_pred cccCCCCccccccccceeeccCCcCcC-------------------CCCCCCcCCCCCCeEECcCCcccccCCccccccc
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNG-------------------PLPSNFGILKNLGAIDISENKLSGQIPSSIGSCI 142 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~-------------------~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~ 142 (427)
++ +|. .+++| +.|+|++|.+++ .+|. ++ ++|+.|+|++|+|+ .+|. +..
T Consensus 133 ~~-lp~---~l~~L-~~L~Ls~N~l~~lp~~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~-- 200 (571)
T 3cvr_A 133 TM-LPE---LPALL-EYINADNNQLTMLPELPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLE-SLPA-VPV-- 200 (571)
T ss_dssp SC-CCC---CCTTC-CEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCS-SCCC-CC---
T ss_pred CC-CCC---cCccc-cEEeCCCCccCcCCCcCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCC-chhh-HHH--
Confidence 53 333 23344 344444444442 1444 33 45555555555555 4444 333
Q ss_pred cc-------cceeeeeeeccccCCCCcccccCCceeeccCCcc
Q 042634 143 RL-------EQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 143 ~l-------~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l 178 (427)
+| +.|++++|.++. +|..+..+++|+.|++++|.+
T Consensus 201 ~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 201 RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp -------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSC
T ss_pred hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcC
Confidence 44 555555555552 445455555555555555555
No 341
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.80 E-value=3.2e-19 Score=179.67 Aligned_cols=144 Identities=27% Similarity=0.349 Sum_probs=114.9
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|+|++ +|. +.. +|+.|+|++|++++ +|. .+++|+.|+|++|.++ .+|. .+++|++|++++|++
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLT-MLPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccC-cCCC---cCCCcCEEECCCCCC
Confidence 5677777775 566 554 77777777777774 666 5778888888888888 4776 567899999999999
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCC-------CeEECcCCcccccCCccccccccccceeeeeeec
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNL-------GAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFF 154 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L-------~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l 154 (427)
++ +|. +. .+| +.|+|++|.++ .+|. +.. +| +.|+|++|+++ .+|..++.+++|+.|++++|.+
T Consensus 173 ~~-lp~-l~--~~L-~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 173 TF-LPE-LP--ESL-EALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp SC-CCC-CC--TTC-CEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSC
T ss_pred CC-cch-hh--CCC-CEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcC
Confidence 85 666 54 778 68999999998 7888 655 77 99999999999 7999999999999999999999
Q ss_pred cccCCCCcccccC
Q 042634 155 RGNIPSSLSSLRG 167 (427)
Q Consensus 155 ~~~~p~~l~~l~~ 167 (427)
++.+|..+..+..
T Consensus 243 ~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 243 SSRIRESLSQQTA 255 (571)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CCcCHHHHHHhhc
Confidence 9998888777654
No 342
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.80 E-value=2.6e-19 Score=155.86 Aligned_cols=130 Identities=23% Similarity=0.363 Sum_probs=103.8
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCc-chhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPS-SIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+++++|+++ .+|..+.. +|+.|+|++|++++..|. .++.+++|++|+|++|.+++..|..+..+++|++|++++|+
T Consensus 13 l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 13 VDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp EECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 678888886 67776654 888888888888743333 37888888888888888887777888888888888888888
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIP 135 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p 135 (427)
+++..|..+.++++| ++|+|++|++++..|..+..+++|+.|++++|.+++..+
T Consensus 90 l~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 90 IKEISNKMFLGLHQL-KTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCEECSSSSTTCTTC-CEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCccCHHHhcCCCCC-CEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 887777778888888 578888888887778888888888888888888876543
No 343
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.79 E-value=3.1e-19 Score=170.01 Aligned_cols=170 Identities=24% Similarity=0.367 Sum_probs=141.5
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|++++|.+++. +. +..+++|+.|++++|.++ .++. +..+++|+.|++++|.++ .++. +..+++|++|++++|.
T Consensus 159 ~L~l~~~~~~~~-~~-~~~l~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~-~~~~-~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 159 YLTVTESKVKDV-TP-IANLTDLYSLSLNYNQIE-DISP-LASLTSLHYFTAYVNQIT-DITP-VANMTRLNSLKIGNNK 232 (347)
T ss_dssp EEECCSSCCCCC-GG-GGGCTTCSEEECTTSCCC-CCGG-GGGCTTCCEEECCSSCCC-CCGG-GGGCTTCCEEECCSSC
T ss_pred EEEecCCCcCCc-hh-hccCCCCCEEEccCCccc-cccc-ccCCCccceeecccCCCC-CCch-hhcCCcCCEEEccCCc
Confidence 378899998854 33 889999999999999998 4655 889999999999999998 4444 8888999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+++..+ +..+++| ++|++++|.+++ + ..+..+++|+.|++++|++++ + ..+..+++|+.|++++|.+++..|.
T Consensus 233 l~~~~~--~~~l~~L-~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 233 ITDLSP--LANLSQL-TWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp CCCCGG--GTTCTTC-CEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred cCCCcc--hhcCCCC-CEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChh
Confidence 985443 7788888 679999999974 3 568889999999999999884 4 4578899999999999999888888
Q ss_pred CcccccCCceeeccCCccccccc
Q 042634 161 SLSSLRGIENLDLSRNNFIRHRN 183 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~Hpn 183 (427)
.+..+++|+.|++++|.+..-+.
T Consensus 306 ~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 306 VIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp HHHTCTTCSEEECCSSSCCCCGG
T ss_pred HhhccccCCEEEccCCccccccC
Confidence 88889999999999998866544
No 344
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=7.6e-20 Score=190.45 Aligned_cols=153 Identities=25% Similarity=0.274 Sum_probs=126.6
Q ss_pred cCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCccc
Q 042634 5 VGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGT 84 (427)
Q Consensus 5 ~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~ 84 (427)
+.|.+. .+|..+..+++|+.|+|++|.++ .+|..+.++++|++|+|++|.|+ .+|..++.+++|++|+|++|+|+ .
T Consensus 209 ~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~ 284 (727)
T 4b8c_D 209 IENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-S 284 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-S
T ss_pred ccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-c
Confidence 334444 45788999999999999999998 89999999999999999999999 99999999999999999999999 8
Q ss_pred CCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCcccccccc-ccceeeeeeeccccCCCCcc
Q 042634 85 TPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIR-LEQLVMNGNFFRGNIPSSLS 163 (427)
Q Consensus 85 ~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~-l~~l~l~~n~l~~~~p~~l~ 163 (427)
+|..++++.+| .+|+|++|.++ .+|..|+.|++|+.|+|++|.+++.+|..++.+.. +..+++++|.+++.+|..+.
T Consensus 285 lp~~~~~l~~L-~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~ 362 (727)
T 4b8c_D 285 LPAELGSCFQL-KYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERR 362 (727)
T ss_dssp CCSSGGGGTTC-SEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--
T ss_pred cChhhcCCCCC-CEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccc
Confidence 89999999999 68999999997 89999999999999999999999988988876533 23578999999998887543
No 345
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.78 E-value=2.2e-18 Score=170.22 Aligned_cols=160 Identities=22% Similarity=0.227 Sum_probs=91.4
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|.+++. | +++.+++|++|+|++|++++ +| ++.+++|++|++++|.+++ +| ++.+++|++|++++|++
T Consensus 47 L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l 118 (457)
T 3bz5_A 47 LDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKL 118 (457)
T ss_dssp EECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCC
T ss_pred EEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcC
Confidence 67777777753 4 57777777777777777764 44 6677777777777777773 33 66667777777777777
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCC--------------------CCcCCCCCCeEECcCCcccccCCcccccc
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPS--------------------NFGILKNLGAIDISENKLSGQIPSSIGSC 141 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~--------------------~~~~l~~L~~l~l~~n~~~~~~p~~~~~~ 141 (427)
++ +| +..+++| ++|++++|++++ ++- .++.+++|+.|++++|++++ +| ++.+
T Consensus 119 ~~-l~--~~~l~~L-~~L~l~~N~l~~-l~l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~--l~~l 190 (457)
T 3bz5_A 119 TK-LD--VSQNPLL-TYLNCARNTLTE-IDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD--VSQN 190 (457)
T ss_dssp SC-CC--CTTCTTC-CEEECTTSCCSC-CCCTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC--CTTC
T ss_pred Ce-ec--CCCCCcC-CEEECCCCccce-eccccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec--cccC
Confidence 64 33 5556666 456666666654 220 23334444444444444442 33 4444
Q ss_pred ccccceeeeeeeccccCCCCcccccCCceeeccCCcccc
Q 042634 142 IRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 142 ~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
++|+.|++++|.+++. .+..+++|+.|++++|++..
T Consensus 191 ~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 191 KLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp TTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC
T ss_pred CCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc
Confidence 4444444444444432 24444555555555555443
No 346
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.78 E-value=7.3e-19 Score=174.41 Aligned_cols=167 Identities=29% Similarity=0.421 Sum_probs=137.7
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|++++|.+++..| ++.+++|+.|++++|+++ .++ .+..+++|+.|++++|.+++. ++ +..+++|++|++++|.
T Consensus 203 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~-~~~-~l~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~ 276 (466)
T 1o6v_A 203 SLIATNNQISDITP--LGILTNLDELSLNGNQLK-DIG-TLASLTNLTDLDLANNQISNL-AP-LSGLTKLTELKLGANQ 276 (466)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC-CCG-GGGGCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEECCSSC
T ss_pred EEEecCCccccccc--ccccCCCCEEECCCCCcc-cch-hhhcCCCCCEEECCCCccccc-hh-hhcCCCCCEEECCCCc
Confidence 37899999996644 788999999999999998 454 588999999999999999844 43 8889999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+++..+ +..+++| +.|++++|++++..| ++.+++|+.|++++|++++..| ++.+++|+.|++++|.+++. .
T Consensus 277 l~~~~~--~~~l~~L-~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 347 (466)
T 1o6v_A 277 ISNISP--LAGLTAL-TNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--S 347 (466)
T ss_dssp CCCCGG--GTTCTTC-SEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--G
T ss_pred cCcccc--ccCCCcc-CeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--h
Confidence 986544 7788888 679999999985433 7889999999999999986544 78889999999999998875 4
Q ss_pred CcccccCCceeeccCCcccccc
Q 042634 161 SLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
.+..+++|+.|++++|.+...+
T Consensus 348 ~l~~l~~L~~L~l~~n~l~~~~ 369 (466)
T 1o6v_A 348 SLANLTNINWLSAGHNQISDLT 369 (466)
T ss_dssp GGTTCTTCCEEECCSSCCCBCG
T ss_pred hhccCCCCCEEeCCCCccCccc
Confidence 6888899999999998886544
No 347
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.78 E-value=1.1e-18 Score=166.12 Aligned_cols=166 Identities=25% Similarity=0.349 Sum_probs=142.2
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|++++|..... ++.+..+++|++|++++|.++ .++. ++.+++|+.|++++|.++ .++. +..+++|++|++++|.
T Consensus 136 ~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~~-~~~~-~~~l~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~ 210 (347)
T 4fmz_A 136 SLNLGANHNLSD-LSPLSNMTGLNYLTVTESKVK-DVTP-IANLTDLYSLSLNYNQIE-DISP-LASLTSLHYFTAYVNQ 210 (347)
T ss_dssp EEECTTCTTCCC-CGGGTTCTTCCEEECCSSCCC-CCGG-GGGCTTCSEEECTTSCCC-CCGG-GGGCTTCCEEECCSSC
T ss_pred EEECCCCCCccc-ccchhhCCCCcEEEecCCCcC-Cchh-hccCCCCCEEEccCCccc-cccc-ccCCCccceeecccCC
Confidence 378999977645 445999999999999999998 4555 999999999999999999 5665 8889999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+++..+ +..+++| +.|++++|.+++ ++. +..+++|+.|++++|.+++ + ..+..+++|+.|++++|.+++. .
T Consensus 211 l~~~~~--~~~~~~L-~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~ 281 (347)
T 4fmz_A 211 ITDITP--VANMTRL-NSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--S 281 (347)
T ss_dssp CCCCGG--GGGCTTC-CEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--G
T ss_pred CCCCch--hhcCCcC-CEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--h
Confidence 985554 7888899 689999999984 444 8899999999999999984 4 5688999999999999999874 4
Q ss_pred CcccccCCceeeccCCcccc
Q 042634 161 SLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~ 180 (427)
.+..+++|+.|++++|.+..
T Consensus 282 ~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 282 VLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp GGGGCTTCSEEECCSSCCCG
T ss_pred hhcCCCCCCEEECcCCcCCC
Confidence 68889999999999998854
No 348
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=3.1e-21 Score=195.07 Aligned_cols=174 Identities=22% Similarity=0.267 Sum_probs=137.7
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeeccc-------------ceeecCcchhccccCCEee-eccccCcccCCc----
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNK-------------FWGEIPSSIGNLTLLITLN-FAENMLEGSIPS---- 63 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~-------------~~~~~p~~~~~l~~L~~L~-l~~n~l~~~~p~---- 63 (427)
|+|++|+|+ .+|.+++.+++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+. .++.
T Consensus 354 L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-~L~~l~l~ 431 (567)
T 1dce_A 354 CELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-DLRSKFLL 431 (567)
T ss_dssp CCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-HHHHHHHH
T ss_pred ccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-hhhhhhhh
Confidence 577778777 678888888888888876664 4555666777777777777 4544333 2211
Q ss_pred --CccCC--CCCCeEEccCccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCcccc
Q 042634 64 --SLGKC--QNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIG 139 (427)
Q Consensus 64 --~~~~l--~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~ 139 (427)
.+..+ ..|++|++++|.+++ +|. +.++.+| +.|+|++|.++ .+|..++.+++|+.|+|++|++++ +| .++
T Consensus 432 ~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L-~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~ 505 (567)
T 1dce_A 432 ENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLV-THLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVA 505 (567)
T ss_dssp HHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTC-CEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGT
T ss_pred cccccccCccCceEEEecCCCCCC-CcC-ccccccC-cEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccC
Confidence 11111 258899999999985 676 8999999 68999999998 899999999999999999999995 78 899
Q ss_pred ccccccceeeeeeeccccC-CCCcccccCCceeeccCCccccccc
Q 042634 140 SCIRLEQLVMNGNFFRGNI-PSSLSSLRGIENLDLSRNNFIRHRN 183 (427)
Q Consensus 140 ~~~~l~~l~l~~n~l~~~~-p~~l~~l~~L~~L~L~~N~ll~Hpn 183 (427)
.+++|+.|++++|.+++.. |..+..+++|+.|++++|.+..-|.
T Consensus 506 ~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 506 NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp TCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 9999999999999999876 8999999999999999999876654
No 349
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.77 E-value=1.2e-18 Score=172.91 Aligned_cols=167 Identities=27% Similarity=0.350 Sum_probs=142.3
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|++++|.+++. +.+..+++|+.|++++|.+++.. + ++.+++|+.|++++|.++ .++ .+..+++|++|++++|.
T Consensus 181 ~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~-~-~~~l~~L~~L~l~~n~l~-~~~-~l~~l~~L~~L~l~~n~ 254 (466)
T 1o6v_A 181 RLDISSNKVSDI--SVLAKLTNLESLIATNNQISDIT-P-LGILTNLDELSLNGNQLK-DIG-TLASLTNLTDLDLANNQ 254 (466)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG-G-GGGCTTCCEEECCSSCCC-CCG-GGGGCTTCSEEECCSSC
T ss_pred EEECcCCcCCCC--hhhccCCCCCEEEecCCcccccc-c-ccccCCCCEEECCCCCcc-cch-hhhcCCCCCEEECCCCc
Confidence 378999999843 45899999999999999998543 3 888999999999999999 554 68889999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+++..| +..+++| +.|++++|.+++. |. +..+++|+.|++++|++++ ++. ++.+++|+.|++++|.+++..|
T Consensus 255 l~~~~~--~~~l~~L-~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~- 326 (466)
T 1o6v_A 255 ISNLAP--LSGLTKL-TELKLGANQISNI-SP-LAGLTALTNLELNENQLED-ISP-ISNLKNLTYLTLYFNNISDISP- 326 (466)
T ss_dssp CCCCGG--GTTCTTC-SEEECCSSCCCCC-GG-GTTCTTCSEEECCSSCCSC-CGG-GGGCTTCSEEECCSSCCSCCGG-
T ss_pred cccchh--hhcCCCC-CEEECCCCccCcc-cc-ccCCCccCeEEcCCCcccC-chh-hcCCCCCCEEECcCCcCCCchh-
Confidence 986655 7888899 6899999999854 43 8899999999999999995 443 8899999999999999998765
Q ss_pred CcccccCCceeeccCCcccccc
Q 042634 161 SLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 161 ~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
+..+++|+.|++++|.+..-+
T Consensus 327 -~~~l~~L~~L~l~~n~l~~~~ 347 (466)
T 1o6v_A 327 -VSSLTKLQRLFFYNNKVSDVS 347 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCCG
T ss_pred -hccCccCCEeECCCCccCCch
Confidence 788999999999999886654
No 350
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.77 E-value=4.1e-18 Score=168.27 Aligned_cols=160 Identities=23% Similarity=0.267 Sum_probs=109.5
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|++++. | ++.+++|++|+|++|++++ +| ++++++|++|++++|.+++ +| ++.+++|++|++++|++
T Consensus 69 L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l 139 (457)
T 3bz5_A 69 LICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTL 139 (457)
T ss_dssp EECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCC
T ss_pred EEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcc
Confidence 55666666642 3 5566666666666666653 32 5555666666666665552 33 55555555555555555
Q ss_pred cc---------------------cCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccc
Q 042634 82 TG---------------------TTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGS 140 (427)
Q Consensus 82 ~~---------------------~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~ 140 (427)
++ .+ .+..+++| +.|++++|++++ +| ++.+++|+.|++++|++++ + .++.
T Consensus 140 ~~l~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L-~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~-~--~l~~ 210 (457)
T 3bz5_A 140 TEIDVSHNTQLTELDCHLNKKITKL--DVTPQTQL-TTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITK-L--DLNQ 210 (457)
T ss_dssp SCCCCTTCTTCCEEECTTCSCCCCC--CCTTCTTC-CEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSC-C--CCTT
T ss_pred ceeccccCCcCCEEECCCCCccccc--ccccCCcC-CEEECCCCccce-ec--cccCCCCCEEECcCCcCCe-e--cccc
Confidence 43 33 24556677 578888888875 55 8888999999999999985 4 4888
Q ss_pred cccccceeeeeeeccccCCCCcccccCCceeeccCCcccccc
Q 042634 141 CIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 141 ~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
+++|+.|++++|.+++ +| +..+++|+.|++++|++...|
T Consensus 211 l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 211 NIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp CTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC
T ss_pred CCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC
Confidence 8999999999999987 45 778888999999998876543
No 351
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.77 E-value=1.9e-20 Score=177.60 Aligned_cols=174 Identities=17% Similarity=0.208 Sum_probs=143.3
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceee-cCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCc-
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGE-IPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN- 79 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~-~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N- 79 (427)
|++++|.+++..|. +..+++|+.|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|++++|
T Consensus 75 L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~ 153 (336)
T 2ast_B 75 FRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCS 153 (336)
T ss_dssp EECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCB
T ss_pred EEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCC
Confidence 67888888866554 67889999999999988765 7788888999999999999998888888888999999999999
Q ss_pred cCccc-CCCCccccccccceeeccCC-cCcCC-CCCCCcCCC-CCCeEECcCC--ccc-ccCCccccccccccceeeeee
Q 042634 80 NLTGT-TPTEVIGLSSLSIYLDLSQN-QLNGP-LPSNFGILK-NLGAIDISEN--KLS-GQIPSSIGSCIRLEQLVMNGN 152 (427)
Q Consensus 80 ~~~~~-~p~~~~~l~~l~~~L~l~~n-~~~~~-~p~~~~~l~-~L~~l~l~~n--~~~-~~~p~~~~~~~~l~~l~l~~n 152 (427)
.+++. ++..+.++++| ++|++++| .+++. ++..+..++ +|+.|++++| .++ +.+|..+..+++|+.|++++|
T Consensus 154 ~l~~~~l~~~~~~~~~L-~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~ 232 (336)
T 2ast_B 154 GFSEFALQTLLSSCSRL-DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDS 232 (336)
T ss_dssp SCCHHHHHHHHHHCTTC-CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTC
T ss_pred CCCHHHHHHHHhcCCCC-CEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCC
Confidence 67653 66667788888 67999999 88753 567788888 9999999998 454 456777888899999999999
Q ss_pred e-ccccCCCCcccccCCceeeccCCc
Q 042634 153 F-FRGNIPSSLSSLRGIENLDLSRNN 177 (427)
Q Consensus 153 ~-l~~~~p~~l~~l~~L~~L~L~~N~ 177 (427)
. +++..+..+..+++|+.|++++|.
T Consensus 233 ~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 233 VMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp TTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 8 776777788888999999998886
No 352
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=1.4e-18 Score=151.23 Aligned_cols=130 Identities=25% Similarity=0.321 Sum_probs=102.5
Q ss_pred CEeeeecccceeecCcchhccccCCEeeeccccCcccCCc-CccCCCCCCeEEccCccCcccCCCCccccccccceeecc
Q 042634 24 QRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPS-SLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLS 102 (427)
Q Consensus 24 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~ 102 (427)
+.+++++|.++ .+|..+.. +|+.|++++|.+++..|. .+..+++|++|++++|++++..|..+.++.+| ++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI-QELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTC-CEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccC-CEEECC
Confidence 67888888886 78876644 788888888888844333 37788888888888888887778888888888 578888
Q ss_pred CCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecccc
Q 042634 103 QNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 103 ~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
+|++++..|..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|.+++.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 8888877777788888888888888888877788888888888888888887754
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.5e-18 Score=161.22 Aligned_cols=144 Identities=26% Similarity=0.331 Sum_probs=127.2
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|+|++|++++. ++ +..+++|+.|+|++|++++ +|. ++.+++|++|++++|.++ .+ +.+..+++|++|++++|+
T Consensus 72 ~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~n~i~-~~-~~l~~l~~L~~L~l~~n~ 145 (291)
T 1h6t_A 72 KLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSLEHNGIS-DI-NGLVHLPQLESLYLGNNK 145 (291)
T ss_dssp EEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEECTTSCCC-CC-GGGGGCTTCCEEECCSSC
T ss_pred EEEccCCccCCC-cc-cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEECCCCcCC-CC-hhhcCCCCCCEEEccCCc
Confidence 479999999965 44 9999999999999999984 554 999999999999999999 55 478899999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecccc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
+++. ..+..+++| +.|++++|++++..| +..+++|+.|++++|.+++ +| .+..+++|+.|++++|.++..
T Consensus 146 l~~~--~~l~~l~~L-~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 146 ITDI--TVLSRLTKL-DTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCCC--GGGGGCTTC-SEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred CCcc--hhhccCCCC-CEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 9854 568889999 689999999986444 9999999999999999994 65 489999999999999999864
No 354
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.76 E-value=2.3e-20 Score=177.06 Aligned_cols=175 Identities=20% Similarity=0.235 Sum_probs=152.2
Q ss_pred CeeecCCccccc-CCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccc-cCcc-cCCcCccCCCCCCeEEcc
Q 042634 1 AFTLVGNQFTGR-IPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAEN-MLEG-SIPSSLGKCQNLILLDLS 77 (427)
Q Consensus 1 ~l~l~~n~l~~~-~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n-~l~~-~~p~~~~~l~~L~~l~l~ 77 (427)
+|+|++|.+++. +|..+..+++|+.|+|++|.+++..|..++.+++|++|++++| .+++ .+|..+..+++|++|+++
T Consensus 97 ~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~ 176 (336)
T 2ast_B 97 HMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLS 176 (336)
T ss_dssp EEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECC
T ss_pred EEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCC
Confidence 479999999876 8889999999999999999999888999999999999999999 7886 377778899999999999
Q ss_pred Cc-cCccc-CCCCccccc-cccceeeccCC--cCc-CCCCCCCcCCCCCCeEECcCCc-ccccCCccccccccccceeee
Q 042634 78 NN-NLTGT-TPTEVIGLS-SLSIYLDLSQN--QLN-GPLPSNFGILKNLGAIDISENK-LSGQIPSSIGSCIRLEQLVMN 150 (427)
Q Consensus 78 ~N-~~~~~-~p~~~~~l~-~l~~~L~l~~n--~~~-~~~p~~~~~l~~L~~l~l~~n~-~~~~~p~~~~~~~~l~~l~l~ 150 (427)
+| .+++. ++..+..++ +| ++|++++| .++ +.+|..+..+++|+.|++++|. +++..+..++++++|+.|+++
T Consensus 177 ~~~~l~~~~~~~~~~~l~~~L-~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~ 255 (336)
T 2ast_B 177 WCFDFTEKHVQVAVAHVSETI-TQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLS 255 (336)
T ss_dssp CCTTCCHHHHHHHHHHSCTTC-CEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred CCCCcChHHHHHHHHhcccCC-CEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCC
Confidence 99 99864 567788889 99 68999999 555 4677788899999999999999 777888899999999999999
Q ss_pred eee-ccccCCCCcccccCCceeeccCC
Q 042634 151 GNF-FRGNIPSSLSSLRGIENLDLSRN 176 (427)
Q Consensus 151 ~n~-l~~~~p~~l~~l~~L~~L~L~~N 176 (427)
+|. +.......+..+++|+.|++++|
T Consensus 256 ~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 256 RCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp TCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 995 33222235788999999999988
No 355
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.76 E-value=1.9e-18 Score=164.94 Aligned_cols=179 Identities=18% Similarity=0.158 Sum_probs=129.2
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCc-chhccccCCE-eeeccccCcccCCcCccCCCCCCeEEccCc
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPS-SIGNLTLLIT-LNFAENMLEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~-L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
|+|++|+|+...+..|.+|++|++|+|++|++.+.+|. .|.+++++.. +++++|++++..|..+..+++|++|++++|
T Consensus 35 L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n 114 (350)
T 4ay9_X 35 LRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNT 114 (350)
T ss_dssp EEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEE
T ss_pred EEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccccccc
Confidence 67888888844345678888888888888887656664 4677777654 556677888555566777888888888888
Q ss_pred cCcccCCCCccccccccceeeccC-CcCcCCCCCCCcCCC-CCCeEECcCCcccccCCccccccccccceeeee-eeccc
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQ-NQLNGPLPSNFGILK-NLGAIDISENKLSGQIPSSIGSCIRLEQLVMNG-NFFRG 156 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~-n~~~~~~p~~~~~l~-~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~-n~l~~ 156 (427)
++++..+..+....++ ..|++.+ |.+....+..+..+. .++.|++++|+++ .+|..+....+|+.+++++ |.++.
T Consensus 115 ~l~~~~~~~~~~~~~l-~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~ 192 (350)
T 4ay9_X 115 GIKHLPDVHKIHSLQK-VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEE 192 (350)
T ss_dssp CCSSCCCCTTCCBSSC-EEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCC
T ss_pred ccccCCchhhcccchh-hhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccC
Confidence 8876655555555555 4566654 455533334566664 6888999999998 6787777778899999975 66665
Q ss_pred cCCCCcccccCCceeeccCCcccccc
Q 042634 157 NIPSSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 157 ~~p~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
..+..|..+++|+.|++++|++..-|
T Consensus 193 i~~~~f~~l~~L~~LdLs~N~l~~lp 218 (350)
T 4ay9_X 193 LPNDVFHGASGPVILDISRTRIHSLP 218 (350)
T ss_dssp CCTTTTTTEECCSEEECTTSCCCCCC
T ss_pred CCHHHhccCcccchhhcCCCCcCccC
Confidence 54467899999999999999886554
No 356
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.76 E-value=4.8e-19 Score=174.78 Aligned_cols=167 Identities=22% Similarity=0.246 Sum_probs=100.9
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccC-------------CEeeeccccCcccCCcCccC
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLL-------------ITLNFAENMLEGSIPSSLGK 67 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L-------------~~L~l~~n~l~~~~p~~~~~ 67 (427)
+|++++|.+ |.+|+++++|++|++|++++|.++|.+|.+++++++| +.|++++|.++ .+|..
T Consensus 15 ~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~lp~~--- 89 (454)
T 1jl5_A 15 EPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLPEL--- 89 (454)
T ss_dssp --------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CCCSC---
T ss_pred hhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cCCCC---
Confidence 468899999 6999999999999999999999999999988887654 67777777766 44432
Q ss_pred CCCCCeEEccCccCcccCCCCccc----------------c-ccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcc
Q 042634 68 CQNLILLDLSNNNLTGTTPTEVIG----------------L-SSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKL 130 (427)
Q Consensus 68 l~~L~~l~l~~N~~~~~~p~~~~~----------------l-~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~ 130 (427)
.++|++|++++|.+++ +|..+.+ + .+| ++|++++|++++ +| .++++++|+.|++++|++
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L-~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l 165 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLL-EYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSL 165 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTC-CEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCC
T ss_pred cCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCC-CEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcC
Confidence 2445555555555553 3332111 1 345 567777777774 66 577788888888888877
Q ss_pred cccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCCcccccc
Q 042634 131 SGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 131 ~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~ll~Hp 182 (427)
++ +|..+ .+|+.|++++|.+++ +| .+..+++|+.|++++|.+..-|
T Consensus 166 ~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~ 211 (454)
T 1jl5_A 166 KK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLP 211 (454)
T ss_dssp SC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCC
T ss_pred cc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCC
Confidence 74 66544 367777777777776 45 5777888888888887775544
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=2.2e-18 Score=157.59 Aligned_cols=143 Identities=21% Similarity=0.319 Sum_probs=126.7
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
+|++++|+++ .+| .+..+++|+.|+|++|+++ .+|+ ++++++|+.|+|++|+++ .+|.... ++|++|++++|+
T Consensus 45 ~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L~L~~N~l~-~l~~~~~--~~L~~L~L~~N~ 117 (263)
T 1xeu_A 45 NFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNRNRLK-NLNGIPS--ACLSRLFLDNNE 117 (263)
T ss_dssp EEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCCS-CCTTCCC--SSCCEEECCSSC
T ss_pred EEECcCCCcc-cch-HHhhCCCCCEEECCCCccC-CChh-hccCCCCCEEECCCCccC-CcCcccc--CcccEEEccCCc
Confidence 3799999999 567 7999999999999999999 5666 999999999999999999 6775444 899999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecccc
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
+++ ++ .+..+++| +.|++++|++++ +| .++.+++|+.|++++|++++. ..+..+++|+.|++++|.+++.
T Consensus 118 l~~-~~-~l~~l~~L-~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 118 LRD-TD-SLIHLKNL-EILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CSB-SG-GGTTCTTC-CEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred cCC-Ch-hhcCcccc-cEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 995 44 58889999 689999999985 44 789999999999999999964 7789999999999999999865
No 358
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.76 E-value=4e-18 Score=148.31 Aligned_cols=127 Identities=23% Similarity=0.300 Sum_probs=63.2
Q ss_pred CEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeeccC
Q 042634 24 QRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQ 103 (427)
Q Consensus 24 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~ 103 (427)
+.+++++|.++ .+|..+. ++|+.|+|++|.++ .+|..+..+++|++|++++|++++..+..|.++.+| ++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L-~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL-LTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCC-CEEECCC
Confidence 34455555554 4444332 34555555555555 445445555555555555555554444445555555 3455555
Q ss_pred CcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecc
Q 042634 104 NQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFR 155 (427)
Q Consensus 104 n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~ 155 (427)
|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+.
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 5555444444555555555555555555322224455555555555555554
No 359
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.76 E-value=2.2e-18 Score=146.48 Aligned_cols=137 Identities=23% Similarity=0.208 Sum_probs=118.9
Q ss_pred cCCCCCCEeeeecccce-eecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCcccccccc
Q 042634 18 GDLHKLQRLTLEMNKFW-GEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLS 96 (427)
Q Consensus 18 ~~l~~L~~L~l~~n~~~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~ 96 (427)
...++|+.|+|++|.++ +.+|..+..+++|++|++++|.++ .+ ..+..+++|++|++++|++++.+|..+..+++|
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~-~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L- 97 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNL- 97 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCC-CC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTC-
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCC-Ch-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCC-
Confidence 34478999999999998 789998999999999999999999 44 789999999999999999997788877779999
Q ss_pred ceeeccCCcCcCCCC--CCCcCCCCCCeEECcCCcccccCCc----cccccccccceeeeeeeccccCCC
Q 042634 97 IYLDLSQNQLNGPLP--SNFGILKNLGAIDISENKLSGQIPS----SIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 97 ~~L~l~~n~~~~~~p--~~~~~l~~L~~l~l~~n~~~~~~p~----~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+.|++++|.+++ +| ..+..+++|+.|++++|.+++ +|. .+..+++|+.|++++|.+.. +|.
T Consensus 98 ~~L~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~~n~~~~-~~~ 164 (168)
T 2ell_A 98 THLNLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTN-LNDYRESVFKLLPQLTYLDGYDREDQE-APD 164 (168)
T ss_dssp CEEECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGT-STTHHHHHHTTCSSCCEETTEETTSCB-CCS
T ss_pred CEEeccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcc-hHHHHHHHHHhCccCcEecCCCCChhh-ccc
Confidence 689999999984 44 788999999999999999995 554 78889999999999998874 344
No 360
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.75 E-value=1.4e-20 Score=182.09 Aligned_cols=179 Identities=18% Similarity=0.224 Sum_probs=148.6
Q ss_pred CeeecCC---cccccCCccc-------cCCCCCCEeeeeccccee----ecCcchhccccCCEeeeccccCcccCCcCcc
Q 042634 1 AFTLVGN---QFTGRIPGSI-------GDLHKLQRLTLEMNKFWG----EIPSSIGNLTLLITLNFAENMLEGSIPSSLG 66 (427)
Q Consensus 1 ~l~l~~n---~l~~~~p~~~-------~~l~~L~~L~l~~n~~~~----~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 66 (427)
+|+|++| ++++.+|..+ ..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+.
T Consensus 64 ~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~ 143 (386)
T 2ca6_A 64 IAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIA 143 (386)
T ss_dssp EEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHH
T ss_pred EEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHH
Confidence 3788884 6777888776 789999999999999986 4888999999999999999999855444444
Q ss_pred C----C---------CCCCeEEccCccCc-ccCC---CCccccccccceeeccCCcCc--C---CCCCCCcCCCCCCeEE
Q 042634 67 K----C---------QNLILLDLSNNNLT-GTTP---TEVIGLSSLSIYLDLSQNQLN--G---PLPSNFGILKNLGAID 124 (427)
Q Consensus 67 ~----l---------~~L~~l~l~~N~~~-~~~p---~~~~~l~~l~~~L~l~~n~~~--~---~~p~~~~~l~~L~~l~ 124 (427)
. + ++|++|++++|+++ +.+| ..+..+++| +.|++++|.++ | ..|..+..+++|+.|+
T Consensus 144 ~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L-~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~ 222 (386)
T 2ca6_A 144 RALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL-HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLD 222 (386)
T ss_dssp HHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTC-CEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEE
T ss_pred HHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCc-CEEECcCCCCCHhHHHHHHHHHhhcCCCccEEE
Confidence 3 3 89999999999997 4555 356678888 68999999997 2 3455889999999999
Q ss_pred CcCCccc----ccCCccccccccccceeeeeeecccc----CCCCc--ccccCCceeeccCCcccc
Q 042634 125 ISENKLS----GQIPSSIGSCIRLEQLVMNGNFFRGN----IPSSL--SSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 125 l~~n~~~----~~~p~~~~~~~~l~~l~l~~n~l~~~----~p~~l--~~l~~L~~L~L~~N~ll~ 180 (427)
|++|.++ +.+|..+..+++|+.|++++|.+++. ++..+ +.+++|+.|++++|.+..
T Consensus 223 Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 223 LQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp CCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred CcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 9999996 57888999999999999999999876 45555 348999999999999865
No 361
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.75 E-value=3.7e-20 Score=179.22 Aligned_cols=179 Identities=21% Similarity=0.286 Sum_probs=149.3
Q ss_pred CeeecCCcccccCC----ccccCCCCCCEeeeecc---cceeecCcch-------hccccCCEeeeccccCcc----cCC
Q 042634 1 AFTLVGNQFTGRIP----GSIGDLHKLQRLTLEMN---KFWGEIPSSI-------GNLTLLITLNFAENMLEG----SIP 62 (427)
Q Consensus 1 ~l~l~~n~l~~~~p----~~~~~l~~L~~L~l~~n---~~~~~~p~~~-------~~l~~L~~L~l~~n~l~~----~~p 62 (427)
+|+|++|++++..+ ..+..+++|+.|+|++| ++++.+|..+ ..+++|++|+|++|.+++ .+|
T Consensus 36 ~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~ 115 (386)
T 2ca6_A 36 EIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLI 115 (386)
T ss_dssp EEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHH
T ss_pred EEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHH
Confidence 48999999997744 44779999999999995 5556667665 689999999999999997 488
Q ss_pred cCccCCCCCCeEEccCccCcccCCCCcc----cc---------ccccceeeccCCcCc-CCCC---CCCcCCCCCCeEEC
Q 042634 63 SSLGKCQNLILLDLSNNNLTGTTPTEVI----GL---------SSLSIYLDLSQNQLN-GPLP---SNFGILKNLGAIDI 125 (427)
Q Consensus 63 ~~~~~l~~L~~l~l~~N~~~~~~p~~~~----~l---------~~l~~~L~l~~n~~~-~~~p---~~~~~l~~L~~l~l 125 (427)
..+..+++|++|+|++|.++...+..+. .+ ++| ++|+|++|+++ +.+| ..+..+++|+.|++
T Consensus 116 ~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L-~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 194 (386)
T 2ca6_A 116 DFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPL-RSIICGRNRLENGSMKEWAKTFQSHRLLHTVKM 194 (386)
T ss_dssp HHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCC-CEEECCSSCCTGGGHHHHHHHHHHCTTCCEEEC
T ss_pred HHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCC-cEEECCCCCCCcHHHHHHHHHHHhCCCcCEEEC
Confidence 8899999999999999999754444333 33 788 68999999997 4555 46778999999999
Q ss_pred cCCccc--c---cCCccccccccccceeeeeeecc----ccCCCCcccccCCceeeccCCcccc
Q 042634 126 SENKLS--G---QIPSSIGSCIRLEQLVMNGNFFR----GNIPSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 126 ~~n~~~--~---~~p~~~~~~~~l~~l~l~~n~l~----~~~p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
++|+++ | .+|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|.+..
T Consensus 195 ~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 195 VQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp CSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred cCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCch
Confidence 999998 3 35558899999999999999996 5678888999999999999998754
No 362
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.75 E-value=1.2e-18 Score=148.05 Aligned_cols=134 Identities=25% Similarity=0.289 Sum_probs=118.0
Q ss_pred CeeecCCccc-ccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCc
Q 042634 1 AFTLVGNQFT-GRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 1 ~l~l~~n~l~-~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
+|+|++|+++ +.+|..+..+++|+.|+|++|.+++ + ..++.+++|++|++++|.+++.+|..+..+++|++|++++|
T Consensus 28 ~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 105 (168)
T 2ell_A 28 ELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-V-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGN 105 (168)
T ss_dssp EEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCC-C-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSS
T ss_pred EEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCC-h-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCC
Confidence 4799999998 8899999999999999999999985 5 77999999999999999999768888888999999999999
Q ss_pred cCcccCC-CCccccccccceeeccCCcCcCCCC---CCCcCCCCCCeEECcCCcccccCCccc
Q 042634 80 NLTGTTP-TEVIGLSSLSIYLDLSQNQLNGPLP---SNFGILKNLGAIDISENKLSGQIPSSI 138 (427)
Q Consensus 80 ~~~~~~p-~~~~~l~~l~~~L~l~~n~~~~~~p---~~~~~l~~L~~l~l~~n~~~~~~p~~~ 138 (427)
++++..+ ..+..+++| +.|++++|++++..+ ..+..+++|+.|++++|.+. ++|.+-
T Consensus 106 ~l~~~~~~~~l~~l~~L-~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~~ 166 (168)
T 2ell_A 106 KLKDISTLEPLKKLECL-KSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDSD 166 (168)
T ss_dssp SCCSSGGGGGGSSCSCC-CEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSSS
T ss_pred ccCcchhHHHHhcCCCC-CEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccccc
Confidence 9985432 678899999 689999999985443 38899999999999999988 677653
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.74 E-value=8.3e-18 Score=171.05 Aligned_cols=148 Identities=26% Similarity=0.318 Sum_probs=129.9
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
.|+|++|+|++. |+ +..+++|+.|+|++|.++ .+| .++.+++|+.|+|++|.++ .+ +.+..+++|+.|+|++|.
T Consensus 69 ~L~Ls~N~l~~~-~~-l~~l~~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L~Ls~N~l~-~l-~~l~~l~~L~~L~Ls~N~ 142 (605)
T 1m9s_A 69 KLFLNGNKLTDI-KP-LTNLKNLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHNGIS-DI-NGLVHLPQLESLYLGNNK 142 (605)
T ss_dssp EEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCC-CCT-TSTTCTTCCEEECTTSCCC-CC-GGGGGCTTCSEEECCSSC
T ss_pred EEEeeCCCCCCC-hh-hccCCCCCEEECcCCCCC-CCh-hhccCCCCCEEEecCCCCC-CC-ccccCCCccCEEECCCCc
Confidence 389999999965 44 999999999999999998 455 7999999999999999999 55 468999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCC
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPS 160 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~ 160 (427)
+++. ..+..+++| +.|+|++|++++..| +..+++|+.|+|++|++++ + ..+..+++|+.|++++|.+.+....
T Consensus 143 l~~l--~~l~~l~~L-~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 143 ITDI--TVLSRLTKL-DTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-L-RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp CCCC--GGGGSCTTC-SEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-C-GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred cCCc--hhhcccCCC-CEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-C-hHHccCCCCCEEEccCCcCcCCccc
Confidence 9965 568899999 689999999996555 9999999999999999995 5 4689999999999999999875433
Q ss_pred C
Q 042634 161 S 161 (427)
Q Consensus 161 ~ 161 (427)
.
T Consensus 216 ~ 216 (605)
T 1m9s_A 216 H 216 (605)
T ss_dssp C
T ss_pred c
Confidence 3
No 364
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.74 E-value=9.7e-20 Score=174.69 Aligned_cols=178 Identities=20% Similarity=0.244 Sum_probs=134.0
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecC----cchhccc-cCCEeeeccccCcccCCcCccCC-----CCC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIP----SSIGNLT-LLITLNFAENMLEGSIPSSLGKC-----QNL 71 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p----~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l-----~~L 71 (427)
++|+.|+++|.+|..+...++|+.|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..++.+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5788899998888877777779999999999885444 5677788 89999999999987767777775 889
Q ss_pred CeEEccCccCcccCCCCcccc-----ccccceeeccCCcCcCCCCCCCc----C-CCCCCeEECcCCcccccCCc----c
Q 042634 72 ILLDLSNNNLTGTTPTEVIGL-----SSLSIYLDLSQNQLNGPLPSNFG----I-LKNLGAIDISENKLSGQIPS----S 137 (427)
Q Consensus 72 ~~l~l~~N~~~~~~p~~~~~l-----~~l~~~L~l~~n~~~~~~p~~~~----~-l~~L~~l~l~~n~~~~~~p~----~ 137 (427)
++|++++|.+++..+..+... .+| ++|+|++|++++..+..+. . .++|+.|++++|.+++..+. .
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L-~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTI-TVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTC-CEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCc-cEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999987666644433 677 6799999998765544433 3 36889999999988854333 3
Q ss_pred ccccc-cccceeeeeeeccccCCCCccc----c-cCCceeeccCCcccc
Q 042634 138 IGSCI-RLEQLVMNGNFFRGNIPSSLSS----L-RGIENLDLSRNNFIR 180 (427)
Q Consensus 138 ~~~~~-~l~~l~l~~n~l~~~~p~~l~~----l-~~L~~L~L~~N~ll~ 180 (427)
+..+. +|+.|++++|.+++..+..+.. + ++|+.|++++|.+..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 44454 8888999999888766554443 3 588889998888754
No 365
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=2.9e-19 Score=186.06 Aligned_cols=167 Identities=25% Similarity=0.272 Sum_probs=121.4
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN 80 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 80 (427)
.|+|++|.++ .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..++.+++|++|+|++|.
T Consensus 228 ~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 304 (727)
T 4b8c_D 228 ALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM 304 (727)
T ss_dssp EEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC
T ss_pred EEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC
Confidence 3899999999 88999999999999999999999 89999999999999999999999 999999999999999999999
Q ss_pred CcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCC-CCeEECcCCcccccCCccccccccccceeeeee-------
Q 042634 81 LTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKN-LGAIDISENKLSGQIPSSIGSCIRLEQLVMNGN------- 152 (427)
Q Consensus 81 ~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~-L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n------- 152 (427)
|+ .+|..+..+.+| ..|+|++|++++.+|..+..+.. +..++|++|.++|.+|..+. .|+++.|
T Consensus 305 l~-~lp~~~~~l~~L-~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~------~l~l~~n~~~~~~~ 376 (727)
T 4b8c_D 305 VT-TLPWEFGNLCNL-QFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERR------FIEINTDGEPQREY 376 (727)
T ss_dssp CC-CCCSSTTSCTTC-CCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------------------
T ss_pred CC-ccChhhhcCCCc-cEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccc------eeEeeccccccccc
Confidence 98 888889999999 68999999999988888766532 23478999999999887654 3455555
Q ss_pred -eccccCCCCcccccCCceeeccCCcc
Q 042634 153 -FFRGNIPSSLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 153 -~l~~~~p~~l~~l~~L~~L~L~~N~l 178 (427)
.+.+..+..+..+..+....++.|.+
T Consensus 377 ~~l~~~~~~~~~~l~~~~~~~ls~Nil 403 (727)
T 4b8c_D 377 DSLQQSTEHLATDLAKRTFTVLSYNTL 403 (727)
T ss_dssp -------------------------CC
T ss_pred CCccccccchhhcccccceeeeecccc
Confidence 33333333344444444444444443
No 366
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.73 E-value=1.3e-19 Score=173.91 Aligned_cols=180 Identities=17% Similarity=0.205 Sum_probs=143.7
Q ss_pred CeeecCCcccccCC----ccccCCC-CCCEeeeecccceeecCcchhcc-----ccCCEeeeccccCcccCCcCccC---
Q 042634 1 AFTLVGNQFTGRIP----GSIGDLH-KLQRLTLEMNKFWGEIPSSIGNL-----TLLITLNFAENMLEGSIPSSLGK--- 67 (427)
Q Consensus 1 ~l~l~~n~l~~~~p----~~~~~l~-~L~~L~l~~n~~~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~--- 67 (427)
+|||++|.+++..+ ..+..++ +|+.|+|++|.+++..+..+..+ ++|++|+|++|.+++..+..++.
T Consensus 26 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 105 (362)
T 3goz_A 26 SLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLA 105 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHH
T ss_pred EEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHH
Confidence 48999999997766 7788999 99999999999997767788886 99999999999999766665444
Q ss_pred -C-CCCCeEEccCccCcccCCCCccc-----cccccceeeccCCcCcCCC----CCCCcCCC-CCCeEECcCCcccccCC
Q 042634 68 -C-QNLILLDLSNNNLTGTTPTEVIG-----LSSLSIYLDLSQNQLNGPL----PSNFGILK-NLGAIDISENKLSGQIP 135 (427)
Q Consensus 68 -l-~~L~~l~l~~N~~~~~~p~~~~~-----l~~l~~~L~l~~n~~~~~~----p~~~~~l~-~L~~l~l~~n~~~~~~p 135 (427)
+ ++|++|++++|.+++..+..+.. ..+| ++|+|++|.++... +..+..++ +|+.|++++|++++..+
T Consensus 106 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L-~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 106 AIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASI-TSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp TSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTC-CEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred hCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCce-eEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhH
Confidence 3 89999999999998766655433 2577 68999999998533 33445565 99999999999997766
Q ss_pred ccccc----c-ccccceeeeeeecccc----CCCCccc-ccCCceeeccCCccccc
Q 042634 136 SSIGS----C-IRLEQLVMNGNFFRGN----IPSSLSS-LRGIENLDLSRNNFIRH 181 (427)
Q Consensus 136 ~~~~~----~-~~l~~l~l~~n~l~~~----~p~~l~~-l~~L~~L~L~~N~ll~H 181 (427)
..++. + ++|+.|++++|.+++. ++..+.. .++|+.|++++|.+..-
T Consensus 185 ~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 185 AELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 65554 4 6999999999999873 3444544 35899999999987543
No 367
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.73 E-value=1.7e-17 Score=142.24 Aligned_cols=126 Identities=25% Similarity=0.261 Sum_probs=60.2
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
+++++|+++ .+|..+ .++|+.|+|++|++++..+..++.+++|++|++++|.+++..+..+..+++|++|++++|++
T Consensus 12 l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 12 IRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp EECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 345555555 334322 24555555555555532223345555555555555555522222344555555555555555
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCccc
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLS 131 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~ 131 (427)
++..+..+..+.+| +.|++++|++++..+..+..+++|+.|++++|.++
T Consensus 89 ~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 89 QSLPNGVFDKLTQL-KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp CCCCTTTTTTCTTC-CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cccCHHHhhCCccc-CEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 54444444445555 34555555554322233344555555555555544
No 368
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.73 E-value=1.6e-17 Score=144.59 Aligned_cols=125 Identities=25% Similarity=0.325 Sum_probs=91.2
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
+++++|+++ .+|..+. ++|+.|+|++|+++ .+|..|.++++|++|+|++|.+++..|..|..+++|++|+|++|++
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 567777777 5666543 57777777777776 6777777777777777777777755455677777777777777777
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCccc
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLS 131 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~ 131 (427)
++..|..|.++++| +.|+|++|+++...+..|..+++|+.|++++|.+.
T Consensus 91 ~~i~~~~f~~l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 91 RCIPPRTFDGLKSL-RLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CBCCTTTTTTCTTC-CEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CEeCHHHhCCCCCC-CEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 76666677777777 56777777777544456777777777777777776
No 369
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.73 E-value=4e-17 Score=161.02 Aligned_cols=158 Identities=27% Similarity=0.374 Sum_probs=99.9
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|.+++ +|.. +++|+.|++++|+++ .+|.. .++|++|++++|.++ .+| +++.+++|++|++++|++
T Consensus 96 L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~---~~~L~~L~L~~n~l~-~lp-~~~~l~~L~~L~l~~N~l 165 (454)
T 1jl5_A 96 LVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSL 165 (454)
T ss_dssp EECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCC
T ss_pred EEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC---CCCCCEEECcCCCCC-CCc-ccCCCCCCCEEECCCCcC
Confidence 4555555554 4432 245555555555555 23321 156777777777777 466 577777777777777777
Q ss_pred cccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCC
Q 042634 82 TGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSS 161 (427)
Q Consensus 82 ~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~ 161 (427)
++ +|..+ .+| ++|++++|++++ +| .++++++|+.|++++|++++ +|... .+|+.|++++|.++ .+| .
T Consensus 166 ~~-lp~~~---~~L-~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~ 232 (454)
T 1jl5_A 166 KK-LPDLP---PSL-EFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-E 232 (454)
T ss_dssp SC-CCCCC---TTC-CEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-C
T ss_pred cc-cCCCc---ccc-cEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-c
Confidence 74 55433 355 567777777764 55 57777777777777777774 55433 36677777777776 455 3
Q ss_pred cccccCCceeeccCCcccccc
Q 042634 162 LSSLRGIENLDLSRNNFIRHR 182 (427)
Q Consensus 162 l~~l~~L~~L~L~~N~ll~Hp 182 (427)
+..+++|+.|++++|++..-|
T Consensus 233 ~~~l~~L~~L~l~~N~l~~l~ 253 (454)
T 1jl5_A 233 LQNLPFLTTIYADNNLLKTLP 253 (454)
T ss_dssp CTTCTTCCEEECCSSCCSSCC
T ss_pred cCCCCCCCEEECCCCcCCccc
Confidence 667777777777777665433
No 370
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.73 E-value=2e-18 Score=143.71 Aligned_cols=128 Identities=20% Similarity=0.192 Sum_probs=95.6
Q ss_pred CCCCCEeeeecccce-eecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccce
Q 042634 20 LHKLQRLTLEMNKFW-GEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIY 98 (427)
Q Consensus 20 l~~L~~L~l~~n~~~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~ 98 (427)
.++|+.|++++|.++ +.+|..++.+++|++|++++|.+++ + ..++.+++|++|++++|.+++.+|..+..+++| ++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L-~~ 92 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS-I-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNL-TH 92 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCC-C-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTC-CE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCC-c-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCC-CE
Confidence 357888888888887 6778777888888888888888884 4 677788888888888888886677766667777 56
Q ss_pred eeccCCcCcCC-CCCCCcCCCCCCeEECcCCcccccCC---ccccccccccceeee
Q 042634 99 LDLSQNQLNGP-LPSNFGILKNLGAIDISENKLSGQIP---SSIGSCIRLEQLVMN 150 (427)
Q Consensus 99 L~l~~n~~~~~-~p~~~~~l~~L~~l~l~~n~~~~~~p---~~~~~~~~l~~l~l~ 150 (427)
|++++|++++. .+..++.+++|+.|++++|++++..+ ..++.+++|+.|+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 88888887742 33677778888888888888775433 356777777777665
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=5e-19 Score=178.92 Aligned_cols=158 Identities=20% Similarity=0.211 Sum_probs=131.8
Q ss_pred ccccCCccccCCCCCCEee-eecccceeecCc------chhcc--ccCCEeeeccccCcccCCcCccCCCCCCeEEccCc
Q 042634 9 FTGRIPGSIGDLHKLQRLT-LEMNKFWGEIPS------SIGNL--TLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 9 l~~~~p~~~~~l~~L~~L~-l~~n~~~~~~p~------~~~~l--~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
+.|.+|..++.|++|+.|+ ++.|.+. .++. .+..+ ..|+.|+|++|.++ .+|. ++.+++|++|+|++|
T Consensus 397 ~~~~~~~~l~~l~~L~~L~~l~~n~~~-~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~-~lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 397 PLLYEKETLQYFSTLKAVDPMRAAYLD-DLRSKFLLENSVLKMEYADVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp TGGGHHHHHHHHHHHHHHCGGGHHHHH-HHHHHHHHHHHHHHHHHTTCSEEECTTSCCS-SCCC-GGGGTTCCEEECCSS
T ss_pred cccCCHHHHHHHHhcccCcchhhcccc-hhhhhhhhcccccccCccCceEEEecCCCCC-CCcC-ccccccCcEeecCcc
Confidence 6778888899999999999 6777654 3432 22222 36899999999999 6886 999999999999999
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccC-CccccccccccceeeeeeeccccC
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQI-PSSIGSCIRLEQLVMNGNFFRGNI 158 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~-p~~~~~~~~l~~l~l~~n~l~~~~ 158 (427)
.++ .+|..++++++| +.|+|++|++++ +| .++.+++|+.|+|++|++++.+ |..++.+++|+.|++++|.+++.+
T Consensus 474 ~l~-~lp~~~~~l~~L-~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 474 RLR-ALPPALAALRCL-EVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CCC-CCCGGGGGCTTC-CEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred ccc-ccchhhhcCCCC-CEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 999 889999999999 689999999985 77 8999999999999999999766 999999999999999999999865
Q ss_pred CCC---cccccCCceeec
Q 042634 159 PSS---LSSLRGIENLDL 173 (427)
Q Consensus 159 p~~---l~~l~~L~~L~L 173 (427)
|.. +..+++|+.|++
T Consensus 550 ~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 550 GIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SCTTHHHHHCTTCSEEEC
T ss_pred cHHHHHHHHCcccCccCC
Confidence 532 234778887753
No 372
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.72 E-value=8.8e-17 Score=163.79 Aligned_cols=69 Identities=25% Similarity=0.299 Sum_probs=36.0
Q ss_pred eeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC
Q 042634 2 FTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL 81 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~ 81 (427)
|+|++|+|+ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|++|.++ .+|. .+++|++|++++|++
T Consensus 66 L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L~~N~l 133 (622)
T 3g06_A 66 LVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWIFGNQL 133 (622)
T ss_dssp EEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEECCSSCC
T ss_pred EEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEECCCCCC
Confidence 566666666 4454 4556666666666665 4554 4455555555555555 3443 233344444444444
Q ss_pred c
Q 042634 82 T 82 (427)
Q Consensus 82 ~ 82 (427)
+
T Consensus 134 ~ 134 (622)
T 3g06_A 134 T 134 (622)
T ss_dssp S
T ss_pred C
Confidence 3
No 373
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.72 E-value=6.3e-17 Score=164.85 Aligned_cols=74 Identities=27% Similarity=0.329 Sum_probs=48.9
Q ss_pred ceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeeccCC
Q 042634 97 IYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRN 176 (427)
Q Consensus 97 ~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N 176 (427)
+.|++++|++++ +| ..+++|+.|++++|+++ .+|. .+++|+.|++++|.++ .+|..+..+++|+.|++++|
T Consensus 224 ~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N 294 (622)
T 3g06_A 224 KELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGN 294 (622)
T ss_dssp CEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSC
T ss_pred CEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCC
Confidence 345555555552 44 33456666666666666 4555 4566777777777777 56777778888888888888
Q ss_pred ccc
Q 042634 177 NFI 179 (427)
Q Consensus 177 ~ll 179 (427)
.+.
T Consensus 295 ~l~ 297 (622)
T 3g06_A 295 PLS 297 (622)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 374
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=7.9e-17 Score=138.07 Aligned_cols=131 Identities=18% Similarity=0.211 Sum_probs=96.9
Q ss_pred CCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeecc
Q 042634 23 LQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLS 102 (427)
Q Consensus 23 L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~ 102 (427)
.+.+++++|+++ .+|..+ .++|+.|++++|.+++..+..+..+++|++|++++|++++..+..+.++.+| ++|+++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKL-TILYLH 84 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTC-CEEECC
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCcc-CEEECC
Confidence 567888888887 677554 3688888888888884444456778888888888888886666667777787 568888
Q ss_pred CCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecccc
Q 042634 103 QNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 103 ~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
+|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+++.
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 8888765556677888888888888888743333456777888888888877654
No 375
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.70 E-value=1.3e-17 Score=138.67 Aligned_cols=129 Identities=19% Similarity=0.163 Sum_probs=115.4
Q ss_pred ccccCCEeeeccccCc-ccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCC
Q 042634 43 NLTLLITLNFAENMLE-GSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLG 121 (427)
Q Consensus 43 ~l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~ 121 (427)
..++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++| ++|++++|.+++.+|..++.+++|+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L-~~L~Ls~n~i~~~~~~~~~~l~~L~ 91 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKL-KKLELSDNRVSGGLEVLAEKCPNLT 91 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTC-CEEECCSSCCCSCTHHHHHHCTTCC
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCC-CEEECCCCcccchHHHHhhhCCCCC
Confidence 3578999999999999 89999999999999999999999965 678889999 6899999999977888888999999
Q ss_pred eEECcCCccccc-CCccccccccccceeeeeeeccccCC---CCcccccCCceeecc
Q 042634 122 AIDISENKLSGQ-IPSSIGSCIRLEQLVMNGNFFRGNIP---SSLSSLRGIENLDLS 174 (427)
Q Consensus 122 ~l~l~~n~~~~~-~p~~~~~~~~l~~l~l~~n~l~~~~p---~~l~~l~~L~~L~L~ 174 (427)
.|++++|++++. .|..++.+++|+.|++++|.+++..+ ..+..+++|+.|+++
T Consensus 92 ~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 92 HLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 999999999962 34889999999999999999998655 468889999999876
No 376
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.69 E-value=3.2e-17 Score=140.47 Aligned_cols=135 Identities=19% Similarity=0.162 Sum_probs=112.1
Q ss_pred ccccCCCCCCEeeeecccceeecCcchhccc-cCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccc
Q 042634 15 GSIGDLHKLQRLTLEMNKFWGEIPSSIGNLT-LLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLS 93 (427)
Q Consensus 15 ~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~ 93 (427)
+.+.++.+|+.|+|++|+++ .+|. +..+. +|++|++++|.+++ + +.+..+++|++|++++|++++..|..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 45678899999999999998 5765 66665 99999999999994 4 6888999999999999999965555558888
Q ss_pred cccceeeccCCcCcCCCCC--CCcCCCCCCeEECcCCcccccCCcc----ccccccccceeeeeeeccc
Q 042634 94 SLSIYLDLSQNQLNGPLPS--NFGILKNLGAIDISENKLSGQIPSS----IGSCIRLEQLVMNGNFFRG 156 (427)
Q Consensus 94 ~l~~~L~l~~n~~~~~~p~--~~~~l~~L~~l~l~~n~~~~~~p~~----~~~~~~l~~l~l~~n~l~~ 156 (427)
+| ++|++++|+++ .+|. .+..+++|+.|++++|.++ .+|.. ++.+++|+.|+++.|....
T Consensus 89 ~L-~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 89 DL-TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp TC-CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CC-CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 88 67999999995 6776 7888999999999999998 67774 7888888888888887653
No 377
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.69 E-value=2e-19 Score=157.35 Aligned_cols=147 Identities=24% Similarity=0.323 Sum_probs=72.7
Q ss_pred CCCCCCEeeeecccceeecCc------chhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCcccc
Q 042634 19 DLHKLQRLTLEMNKFWGEIPS------SIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGL 92 (427)
Q Consensus 19 ~l~~L~~L~l~~n~~~~~~p~------~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l 92 (427)
....++.++++.|.++|.+|. .++.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+|..+..+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~-~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEES-CCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCc-ccc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 334444455555555444444 4555555555555555555 244 4455555555555555554 344444444
Q ss_pred ccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCC--ccccccccccceeeeeeeccccCCCC---------
Q 042634 93 SSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIP--SSIGSCIRLEQLVMNGNFFRGNIPSS--------- 161 (427)
Q Consensus 93 ~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p--~~~~~~~~l~~l~l~~n~l~~~~p~~--------- 161 (427)
++| +.|++++|++++ +| .++.+++|+.|++++|++++ +| ..+..+++|+.|++++|.+++..|..
T Consensus 93 ~~L-~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 93 DTL-EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHC-SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred CcC-CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc-hhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 444 345555555542 33 34455555555555555552 22 24455555555555555555443332
Q ss_pred -cccccCCceee
Q 042634 162 -LSSLRGIENLD 172 (427)
Q Consensus 162 -l~~l~~L~~L~ 172 (427)
+..+++|+.|+
T Consensus 169 ~~~~l~~L~~Ld 180 (198)
T 1ds9_A 169 VVKRLPNLKKLD 180 (198)
T ss_dssp HHHHCSSCSEEC
T ss_pred HHHhCCCcEEEC
Confidence 44555555554
No 378
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.65 E-value=8.4e-19 Score=153.38 Aligned_cols=145 Identities=20% Similarity=0.246 Sum_probs=125.6
Q ss_pred eeecCCcccccCCc------cccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEE
Q 042634 2 FTLVGNQFTGRIPG------SIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLD 75 (427)
Q Consensus 2 l~l~~n~l~~~~p~------~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~ 75 (427)
+++++|.++|.+|. .+..+++|++|+|++|.+++ +| .++++++|++|++++|.++ .+|..+..+++|++|+
T Consensus 23 l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~ 99 (198)
T 1ds9_A 23 TEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELW 99 (198)
T ss_dssp TTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEE
T ss_pred cchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEE
Confidence 57888999999887 89999999999999999984 88 8999999999999999999 8998888889999999
Q ss_pred ccCccCcccCCCCccccccccceeeccCCcCcCCCC--CCCcCCCCCCeEECcCCcccccCCcc----------cccccc
Q 042634 76 LSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLP--SNFGILKNLGAIDISENKLSGQIPSS----------IGSCIR 143 (427)
Q Consensus 76 l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p--~~~~~l~~L~~l~l~~n~~~~~~p~~----------~~~~~~ 143 (427)
+++|++++ +| .+..+++| +.|++++|++++ +| ..+..+++|+.|++++|.+++.+|.. +..+++
T Consensus 100 L~~N~l~~-l~-~~~~l~~L-~~L~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~ 175 (198)
T 1ds9_A 100 ISYNQIAS-LS-GIEKLVNL-RVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPN 175 (198)
T ss_dssp EEEEECCC-HH-HHHHHHHS-SEEEESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSS
T ss_pred CcCCcCCc-CC-ccccCCCC-CEEECCCCcCCc-hhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCC
Confidence 99999985 55 57888899 689999999974 44 47889999999999999998776653 788899
Q ss_pred ccceeeeeeecc
Q 042634 144 LEQLVMNGNFFR 155 (427)
Q Consensus 144 l~~l~l~~n~l~ 155 (427)
|+.|+ +|.++
T Consensus 176 L~~Ld--~~~i~ 185 (198)
T 1ds9_A 176 LKKLD--GMPVD 185 (198)
T ss_dssp CSEEC--CGGGT
T ss_pred cEEEC--CcccC
Confidence 99876 66665
No 379
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.65 E-value=3.2e-16 Score=149.37 Aligned_cols=170 Identities=18% Similarity=0.176 Sum_probs=133.6
Q ss_pred CeeecCCcccccCCc-cccCCCCCCE-eeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccC
Q 042634 1 AFTLVGNQFTGRIPG-SIGDLHKLQR-LTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSN 78 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~-~~~~l~~L~~-L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 78 (427)
+|+|++|++.+.+|. .|.++++|+. ++++.|++++..|..|..+++|++|++++|.+++..+..+....++..|++++
T Consensus 58 ~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~ 137 (350)
T 4ay9_X 58 KIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD 137 (350)
T ss_dssp EEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEES
T ss_pred EEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcc
Confidence 489999999877774 5788998775 66778999965577899999999999999999954445566777889999965
Q ss_pred -ccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcC-CcccccCCc-cccccccccceeeeeeecc
Q 042634 79 -NNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISE-NKLSGQIPS-SIGSCIRLEQLVMNGNFFR 155 (427)
Q Consensus 79 -N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~-n~~~~~~p~-~~~~~~~l~~l~l~~n~l~ 155 (427)
|++....+..+..+....+.|+|++|+++ .+|..+....+|+.|++++ |.++ .+|. .|.++++|+.|++++|+++
T Consensus 138 ~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 138 NINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp CTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCC
T ss_pred ccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcC
Confidence 67775555667777654367999999998 6777766778899999985 6666 6775 6789999999999999999
Q ss_pred ccCCCCcccccCCceee
Q 042634 156 GNIPSSLSSLRGIENLD 172 (427)
Q Consensus 156 ~~~p~~l~~l~~L~~L~ 172 (427)
...+..+.+++.|+.++
T Consensus 216 ~lp~~~~~~L~~L~~l~ 232 (350)
T 4ay9_X 216 SLPSYGLENLKKLRARS 232 (350)
T ss_dssp CCCSSSCTTCCEEECTT
T ss_pred ccChhhhccchHhhhcc
Confidence 76555556555555443
No 380
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.63 E-value=2.5e-18 Score=170.17 Aligned_cols=176 Identities=16% Similarity=0.081 Sum_probs=93.0
Q ss_pred eeecCCcccccCCccccC-----CCCCCEeeeecccceee----cCcchhccccCCEeeeccccCcccC-----CcCccC
Q 042634 2 FTLVGNQFTGRIPGSIGD-----LHKLQRLTLEMNKFWGE----IPSSIGNLTLLITLNFAENMLEGSI-----PSSLGK 67 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~~-----l~~L~~L~l~~n~~~~~----~p~~~~~l~~L~~L~l~~n~l~~~~-----p~~~~~ 67 (427)
|+|++|.+++..+..+.. +++|+.|+|++|.+++. +|..+..+++|+.|++++|.+++.. +..+..
T Consensus 175 L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~ 254 (461)
T 1z7x_W 175 LTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHP 254 (461)
T ss_dssp EECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTST
T ss_pred EECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcC
Confidence 566666666544433332 45666666666666532 4555666666666666666666321 111223
Q ss_pred CCCCCeEEccCccCccc----CCCCccccccccceeeccCCcCcCCCCCCCcC-----CCCCCeEECcCCccccc----C
Q 042634 68 CQNLILLDLSNNNLTGT----TPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGI-----LKNLGAIDISENKLSGQ----I 134 (427)
Q Consensus 68 l~~L~~l~l~~N~~~~~----~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~-----l~~L~~l~l~~n~~~~~----~ 134 (427)
+++|++|++++|.++.. ++..+..+++| ++|++++|.+++..+..+.. .++|+.|++++|.+++. +
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L-~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 333 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESL-KELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHF 333 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTC-CEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCc-ceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHH
Confidence 55666666666666543 44445555566 45666666664322222221 24566666666655543 3
Q ss_pred CccccccccccceeeeeeeccccCCCCccc-----ccCCceeeccCCcc
Q 042634 135 PSSIGSCIRLEQLVMNGNFFRGNIPSSLSS-----LRGIENLDLSRNNF 178 (427)
Q Consensus 135 p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~-----l~~L~~L~L~~N~l 178 (427)
|..+..+++|+.|++++|.+++..+..+.. .++|+.|++++|.+
T Consensus 334 ~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 334 SSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 344445556666666666555443333321 34555556555554
No 381
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.61 E-value=1.1e-16 Score=147.76 Aligned_cols=92 Identities=20% Similarity=0.131 Sum_probs=74.2
Q ss_pred CccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccc
Q 042634 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279 (427)
Q Consensus 200 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 279 (427)
...++||||+++|+|.+ +... ....++.|++.||+||| +.||+||||||+|||++ ++.+||+|||
T Consensus 173 ~~~~lvmE~~~g~~L~~-l~~~----------~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl~DFG 237 (282)
T 1zar_A 173 EGNAVLMELIDAKELYR-VRVE----------NPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWIIDFP 237 (282)
T ss_dssp ETTEEEEECCCCEEGGG-CCCS----------CHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEECCCT
T ss_pred cceEEEEEecCCCcHHH-cchh----------hHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEEEECC
Confidence 45699999999999988 4321 23469999999999999 89999999999999999 9999999999
Q ss_pred cccccCCcCCCccccccccccCC----------CCcCccccchh
Q 042634 280 LAKFLPEATNNFFNFQIAEYGMG----------SEVSTSGDVYS 313 (427)
Q Consensus 280 ~a~~~~~~~~~~~~y~aPE~~~~----------~~~~~~~DiwS 313 (427)
+|+.. ..++|||++.. ..+..++|+|+
T Consensus 238 ~a~~~-------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 238 QSVEV-------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp TCEET-------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred CCeEC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 99753 34788988743 33455566654
No 382
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.60 E-value=1.4e-17 Score=164.82 Aligned_cols=177 Identities=18% Similarity=0.165 Sum_probs=98.9
Q ss_pred eeecCCcccccCCcccc-CCC----CCCEeeeeccccee----ecCcchhccccCCEeeeccccCcccCCcCccC-----
Q 042634 2 FTLVGNQFTGRIPGSIG-DLH----KLQRLTLEMNKFWG----EIPSSIGNLTLLITLNFAENMLEGSIPSSLGK----- 67 (427)
Q Consensus 2 l~l~~n~l~~~~p~~~~-~l~----~L~~L~l~~n~~~~----~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~----- 67 (427)
|+|++|.+++..+..+. .+. +|++|+|++|.++. .+|..+..+++|++|+|++|.+++..+..+..
T Consensus 61 L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~ 140 (461)
T 1z7x_W 61 LNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDP 140 (461)
T ss_dssp EECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTST
T ss_pred EeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcC
Confidence 56777777654443332 344 57777777777662 45666677777777777777766443333222
Q ss_pred CCCCCeEEccCccCcccC----CCCccccccccceeeccCCcCcCCCCCCCc-----CCCCCCeEECcCCccccc----C
Q 042634 68 CQNLILLDLSNNNLTGTT----PTEVIGLSSLSIYLDLSQNQLNGPLPSNFG-----ILKNLGAIDISENKLSGQ----I 134 (427)
Q Consensus 68 l~~L~~l~l~~N~~~~~~----p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~-----~l~~L~~l~l~~n~~~~~----~ 134 (427)
.++|++|++++|.+++.. +..+..+++| ++|++++|.++...+..+. .+++|+.|++++|.+++. +
T Consensus 141 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L-~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 219 (461)
T 1z7x_W 141 QCRLEKLQLEYCSLSAASCEPLASVLRAKPDF-KELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDL 219 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHHHHCTTC-CEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHH
T ss_pred CCcceEEECCCCCCCHHHHHHHHHHHhhCCCC-CEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHH
Confidence 345777777777666432 3344445666 4566666666533222222 244666666666666642 3
Q ss_pred CccccccccccceeeeeeeccccCC-----CCcccccCCceeeccCCccc
Q 042634 135 PSSIGSCIRLEQLVMNGNFFRGNIP-----SSLSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 135 p~~~~~~~~l~~l~l~~n~l~~~~p-----~~l~~l~~L~~L~L~~N~ll 179 (427)
+..+..+++|+.|++++|.+++... ..+..+++|+.|++++|.+.
T Consensus 220 ~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~ 269 (461)
T 1z7x_W 220 CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGIT 269 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 5555566666666666666554321 11123556666666666543
No 383
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=6.5e-16 Score=132.24 Aligned_cols=143 Identities=16% Similarity=0.133 Sum_probs=117.7
Q ss_pred eecccceeecCcchhccccCCEeeeccccCcccCCcCccCCC-CCCeEEccCccCcccCCCCccccccccceeeccCCcC
Q 042634 28 LEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQ-NLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQL 106 (427)
Q Consensus 28 l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~ 106 (427)
++.+.+. . ...+..+++|+.|++++|.++ .+|. +..+. +|++|++++|.+++. ..+..+++| ++|++++|++
T Consensus 4 lt~~~i~-~-~~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L-~~L~Ls~N~l 76 (176)
T 1a9n_A 4 LTAELIE-Q-AAQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRL-KTLLVNNNRI 76 (176)
T ss_dssp CCHHHHH-T-SCEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSC-CEEECCSSCC
T ss_pred ccHHHHH-H-HHhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCC-CEEECCCCcc
Confidence 3444444 2 234778999999999999999 7764 55655 999999999999965 578889999 6899999999
Q ss_pred cCCCCCCCcCCCCCCeEECcCCcccccCCc--cccccccccceeeeeeeccccCCCC----cccccCCceeeccCCccc
Q 042634 107 NGPLPSNFGILKNLGAIDISENKLSGQIPS--SIGSCIRLEQLVMNGNFFRGNIPSS----LSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 107 ~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~--~~~~~~~l~~l~l~~n~l~~~~p~~----l~~l~~L~~L~L~~N~ll 179 (427)
++..|..++.+++|+.|++++|+++ .+|. .++.+++|+.|++++|.++. +|.. +..+++|+.++++.|...
T Consensus 77 ~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 77 CRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred cccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 8543344599999999999999997 6787 88999999999999999985 5664 889999999999887753
No 384
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.60 E-value=2.7e-15 Score=127.61 Aligned_cols=107 Identities=25% Similarity=0.243 Sum_probs=89.5
Q ss_pred CCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeec
Q 042634 22 KLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDL 101 (427)
Q Consensus 22 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l 101 (427)
..+.|++++|.++ .+|..+. ++|++|+|++|.+++..|..+..+++|++|+|++|++++..+..|.++++| ++|+|
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L-~~L~L 85 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQL-TQLSL 85 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTC-CEEEC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCC-CEEEC
Confidence 3578899999988 6887763 888999999999996667778889999999999999987666677888888 67999
Q ss_pred cCCcCcCCCCCCCcCCCCCCeEECcCCcccc
Q 042634 102 SQNQLNGPLPSNFGILKNLGAIDISENKLSG 132 (427)
Q Consensus 102 ~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~ 132 (427)
++|++++..+..+..+++|+.|+|++|+++.
T Consensus 86 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 86 NDNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CCCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 9999986556678999999999999999884
No 385
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.59 E-value=3.4e-15 Score=127.44 Aligned_cols=104 Identities=24% Similarity=0.240 Sum_probs=72.5
Q ss_pred CEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeeccC
Q 042634 24 QRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQ 103 (427)
Q Consensus 24 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~ 103 (427)
+.+++++|.++ .+|..+. ++|++|+|++|++++..|..+..+++|++|+|++|+|++..+..|.++.+| +.|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQL-TQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchh-hEEECCC
Confidence 67777777775 6776664 677777777777775556667777777777777777775554555667777 5677777
Q ss_pred CcCcCCCCCCCcCCCCCCeEECcCCccc
Q 042634 104 NQLNGPLPSNFGILKNLGAIDISENKLS 131 (427)
Q Consensus 104 n~~~~~~p~~~~~l~~L~~l~l~~n~~~ 131 (427)
|++++..+..+..+++|+.|+|++|++.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 7776443444777777777777777776
No 386
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.59 E-value=4.5e-15 Score=126.23 Aligned_cols=108 Identities=22% Similarity=0.266 Sum_probs=84.9
Q ss_pred cCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEEC
Q 042634 46 LLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDI 125 (427)
Q Consensus 46 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l 125 (427)
..+.|++++|.++ .+|..+. ++|++|++++|++++..|..+.++.+| ++|+|++|++++..+..|..+++|+.|+|
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L-~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 85 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQL-TRLDLDNNQLTVLPAGVFDKLTQLTQLSL 85 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTC-SEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccC-CEEECCCCCcCccChhhccCCCCCCEEEC
Confidence 4578888888888 7887664 778888888888887777778888888 57888888888655566788888888888
Q ss_pred cCCcccccCCccccccccccceeeeeeecccc
Q 042634 126 SENKLSGQIPSSIGSCIRLEQLVMNGNFFRGN 157 (427)
Q Consensus 126 ~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~ 157 (427)
++|++++..|..+..+++|+.|++++|.++..
T Consensus 86 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 86 NDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 88888854445678888888888888888753
No 387
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.59 E-value=4e-15 Score=126.98 Aligned_cols=102 Identities=27% Similarity=0.331 Sum_probs=91.0
Q ss_pred CeeecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcC-ccCCCCCCeEEccCc
Q 042634 1 AFTLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSS-LGKCQNLILLDLSNN 79 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~l~l~~N 79 (427)
.+++++|+++ .+|..+. ++|+.|+|++|++++..|..|+++++|++|+|++|+|+ .+|+. +..+++|++|+|++|
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECCCC
Confidence 3789999998 7888775 89999999999999766888999999999999999999 56655 689999999999999
Q ss_pred cCcccCCCCccccccccceeeccCCcCc
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLN 107 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~ 107 (427)
++++..+..+..+++| +.|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L-~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSL-THIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTC-SEEECCSSCBC
T ss_pred ccceeCHHHhccccCC-CEEEeCCCCcc
Confidence 9996666668999999 68999999997
No 388
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.49 E-value=7.9e-14 Score=132.57 Aligned_cols=101 Identities=24% Similarity=0.197 Sum_probs=53.2
Q ss_pred eeecCC-cccccCCccccCCCCCCEeeeec-ccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCc
Q 042634 2 FTLVGN-QFTGRIPGSIGDLHKLQRLTLEM-NKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 2 l~l~~n-~l~~~~p~~~~~l~~L~~L~l~~-n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
++++++ +|+ .+|. +..+++|+.|+|++ |++++..|..|++|++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455555 555 3455 56666666666654 6665433345566666666666666666544445555666666666666
Q ss_pred cCcccCCCCccccccccceeeccCCcC
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQL 106 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~ 106 (427)
+|++.++..+..+. | +.|+|.+|++
T Consensus 91 ~l~~~~~~~~~~~~-L-~~l~l~~N~~ 115 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-L-QELVLSGNPL 115 (347)
T ss_dssp CCSCCCSTTTCSCC-C-CEEECCSSCC
T ss_pred ccceeCHHHcccCC-c-eEEEeeCCCc
Confidence 66533333332222 3 3444444444
No 389
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=3.7e-13 Score=127.03 Aligned_cols=155 Identities=14% Similarity=0.131 Sum_probs=98.9
Q ss_pred CCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccC----cccCCCCc------
Q 042634 20 LHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNL----TGTTPTEV------ 89 (427)
Q Consensus 20 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~----~~~~p~~~------ 89 (427)
+++|+.|+|+. +++..-+..|.+|++|+.|++++|.++...+.+|.++.++.++.+..+.. ...-...|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 89999999988 77733335688999999999999988733334465555555555444211 00000000
Q ss_pred --------------------------------------------cccccccceeeccCCcCcCCCCCCCcCCCCCCeEEC
Q 042634 90 --------------------------------------------IGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDI 125 (427)
Q Consensus 90 --------------------------------------------~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l 125 (427)
..+.+| +.++|++|+++...+..|.+|++|+.+++
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L-~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNL-VSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTC-CEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCC-eEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 014566 56777777776444456777777888877
Q ss_pred cCCcccccCCcccccccccc-ceeeeeeeccccCCCCcccccCCceeeccCCcc
Q 042634 126 SENKLSGQIPSSIGSCIRLE-QLVMNGNFFRGNIPSSLSSLRGIENLDLSRNNF 178 (427)
Q Consensus 126 ~~n~~~~~~p~~~~~~~~l~-~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l 178 (427)
++| ++..-+.+|.+|.+|+ .+.+.+ .++...+.+|.++++|+.++++.|.+
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i 309 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKI 309 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCcc
Confidence 777 5533344677777777 777777 56655567777777777777766554
No 390
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=3.9e-13 Score=127.74 Aligned_cols=105 Identities=19% Similarity=0.092 Sum_probs=90.7
Q ss_pred CEeeeecc-cceeecCcchhccccCCEeeecc-ccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeec
Q 042634 24 QRLTLEMN-KFWGEIPSSIGNLTLLITLNFAE-NMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDL 101 (427)
Q Consensus 24 ~~L~l~~n-~~~~~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l 101 (427)
..++++++ .++ .+|. |+.+++|+.|+|++ |.|++..|..|+.+++|++|+|++|+|++..|..|.++++| +.|+|
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L-~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRL-SRLNL 87 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCC-CEEEC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCC-CEEeC
Confidence 45788988 898 6999 99999999999996 99996655789999999999999999999998889999999 68999
Q ss_pred cCCcCcCCCCCCCcCCCCCCeEECcCCcccc
Q 042634 102 SQNQLNGPLPSNFGILKNLGAIDISENKLSG 132 (427)
Q Consensus 102 ~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~ 132 (427)
++|+|++..+..+..++ |+.|+|.+|.+..
T Consensus 88 ~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 99999854445566555 9999999999873
No 391
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.34 E-value=5.9e-12 Score=118.69 Aligned_cols=152 Identities=17% Similarity=0.254 Sum_probs=114.8
Q ss_pred CCCCCEeeeecccce--e-----------------ecC-cchhc--------cccCCEeeeccccCcccCCcCccCCCCC
Q 042634 20 LHKLQRLTLEMNKFW--G-----------------EIP-SSIGN--------LTLLITLNFAENMLEGSIPSSLGKCQNL 71 (427)
Q Consensus 20 l~~L~~L~l~~n~~~--~-----------------~~p-~~~~~--------l~~L~~L~l~~n~l~~~~p~~~~~l~~L 71 (427)
+++|+.|||++|++. . .+| ..|.+ |++|+.|+|++ .++..-+.+|.+|++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 788999999999987 1 233 35667 99999999999 8883334568899999
Q ss_pred CeEEccCccCcccCCCCccccccccceeeccCCcC----cCCCCCCC---------------------------------
Q 042634 72 ILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQL----NGPLPSNF--------------------------------- 114 (427)
Q Consensus 72 ~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~----~~~~p~~~--------------------------------- 114 (427)
++|++++|.++...+..|.++.++ ..+.+..+.. ...-...|
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l-~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~ 205 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTA-IFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDIN 205 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCE-EEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCS
T ss_pred ceEEcCCCCccccchhhhcCCCce-EEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccc
Confidence 999999999987777788887766 4455444211 00000000
Q ss_pred -----------------cCCCCCCeEECcCCcccccCCc-cccccccccceeeeeeeccccCCCCcccccCCc-eeeccC
Q 042634 115 -----------------GILKNLGAIDISENKLSGQIPS-SIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIE-NLDLSR 175 (427)
Q Consensus 115 -----------------~~l~~L~~l~l~~n~~~~~~p~-~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~-~L~L~~ 175 (427)
..+++|+.+++++|.++ .||. +|.+|.+|+.+++.+| ++...+.+|.++.+|+ .+.+..
T Consensus 206 ~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~ 283 (329)
T 3sb4_A 206 FLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA 283 (329)
T ss_dssp EEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT
T ss_pred eEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc
Confidence 13789999999999999 4554 7899999999999998 7777778899999999 998875
No 392
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=1.3e-14 Score=139.05 Aligned_cols=160 Identities=17% Similarity=0.132 Sum_probs=109.6
Q ss_pred CCCCCEeeeecccceeecCcchhcc-----ccCCEeeeccccCcccCCcCcc-CCCCCCeEEccCccCcccCCCCcc---
Q 042634 20 LHKLQRLTLEMNKFWGEIPSSIGNL-----TLLITLNFAENMLEGSIPSSLG-KCQNLILLDLSNNNLTGTTPTEVI--- 90 (427)
Q Consensus 20 l~~L~~L~l~~n~~~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~l~l~~N~~~~~~p~~~~--- 90 (427)
+++|+.|+|++|.++..-...+..+ ++|+.|+|++|.++......+. .+++|++|+|++|.++......+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4578888888888875434444443 6888888888888754333333 356788888888888644333332
Q ss_pred --ccccccceeeccCCcCcC----CCCCCCcCCCCCCeEECcCCccccc----CCccccccccccceeeeeeecccc---
Q 042634 91 --GLSSLSIYLDLSQNQLNG----PLPSNFGILKNLGAIDISENKLSGQ----IPSSIGSCIRLEQLVMNGNFFRGN--- 157 (427)
Q Consensus 91 --~l~~l~~~L~l~~n~~~~----~~p~~~~~l~~L~~l~l~~n~~~~~----~p~~~~~~~~l~~l~l~~n~l~~~--- 157 (427)
...+| ++|+|++|.++. .++..+..+++|+.|+|++|.++.. ++..+..+++|+.|++++|.++..
T Consensus 151 ~~~~~~L-~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~ 229 (372)
T 3un9_A 151 LHDQCQI-TTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAAL 229 (372)
T ss_dssp HSTTCCC-CEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHH
T ss_pred HhcCCcc-ceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHH
Confidence 24566 578888888863 2344456778888999999888742 345566777888999999888753
Q ss_pred -CCCCcccccCCceeeccCCcccc
Q 042634 158 -IPSSLSSLRGIENLDLSRNNFIR 180 (427)
Q Consensus 158 -~p~~l~~l~~L~~L~L~~N~ll~ 180 (427)
++..+...++|+.|++++|.+..
T Consensus 230 ~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 230 ALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHHhCCCCCEEeccCCCCCH
Confidence 23344556788999999888643
No 393
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=1.9e-14 Score=137.91 Aligned_cols=161 Identities=19% Similarity=0.149 Sum_probs=118.2
Q ss_pred CeeecCCcccccCCccccCC-----CCCCEeeeecccceeecCcch-hccccCCEeeeccccCcccCCcCc-----cCCC
Q 042634 1 AFTLVGNQFTGRIPGSIGDL-----HKLQRLTLEMNKFWGEIPSSI-GNLTLLITLNFAENMLEGSIPSSL-----GKCQ 69 (427)
Q Consensus 1 ~l~l~~n~l~~~~p~~~~~l-----~~L~~L~l~~n~~~~~~p~~~-~~l~~L~~L~l~~n~l~~~~p~~~-----~~l~ 69 (427)
+|+|++|.++..-...+... ++|+.|+|++|.++..-...+ ..+++|+.|+|++|.++......+ ...+
T Consensus 76 ~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~ 155 (372)
T 3un9_A 76 QLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQC 155 (372)
T ss_dssp EEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTC
T ss_pred EEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCC
Confidence 37899999986544444333 699999999999974433333 457889999999999985444444 2457
Q ss_pred CCCeEEccCccCccc----CCCCccccccccceeeccCCcCcC----CCCCCCcCCCCCCeEECcCCccccc----CCcc
Q 042634 70 NLILLDLSNNNLTGT----TPTEVIGLSSLSIYLDLSQNQLNG----PLPSNFGILKNLGAIDISENKLSGQ----IPSS 137 (427)
Q Consensus 70 ~L~~l~l~~N~~~~~----~p~~~~~l~~l~~~L~l~~n~~~~----~~p~~~~~l~~L~~l~l~~n~~~~~----~p~~ 137 (427)
+|++|+|++|.++.. ++..+...++| ++|+|++|.++. .++..+..+++|+.|+|++|.++.. ++..
T Consensus 156 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L-~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 156 QITTLRLSNNPLTAAGVAVLMEGLAGNTSV-THLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCEEECCSSCCHHHHHHHHHHHHHTCSSC-CEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred ccceeeCCCCCCChHHHHHHHHHHhcCCCc-CEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 899999999999742 33344667788 689999999974 2355667788999999999999853 3344
Q ss_pred ccccccccceeeeeeeccccCCCCc
Q 042634 138 IGSCIRLEQLVMNGNFFRGNIPSSL 162 (427)
Q Consensus 138 ~~~~~~l~~l~l~~n~l~~~~p~~l 162 (427)
+..+++|+.|++++|.++......+
T Consensus 235 L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHhCCCCCEEeccCCCCCHHHHHHH
Confidence 5567899999999999886543333
No 394
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.29 E-value=1.8e-12 Score=117.80 Aligned_cols=77 Identities=26% Similarity=0.258 Sum_probs=58.6
Q ss_pred ccceeeeeecC-CCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccc
Q 042634 201 SEALVYEFMVN-GSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFG 279 (427)
Q Consensus 201 ~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG 279 (427)
..++||||+.+ |.+...+.... ...++..+..++.|++.||.|||. +.||+||||||+|||++. .+||+|||
T Consensus 142 ~~~lVmE~~g~~g~~~~~L~~~~---~~~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlkp~NILl~~--~~~liDFG 214 (258)
T 1zth_A 142 KNVLLMEFIGEDELPAPTLVELG---RELKELDVEGIFNDVVENVKRLYQ--EAELVHADLSEYNIMYID--KVYFIDMG 214 (258)
T ss_dssp TTEEEEECCEETTEECCBHHHHG---GGGGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCSTTSEEESS--SEEECCCT
T ss_pred CCEEEEEecCCCCCccccHHHHh---hccChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCCHHHEEEcC--cEEEEECc
Confidence 46899999942 43322222111 113345678899999999999995 579999999999999998 89999999
Q ss_pred ccccc
Q 042634 280 LAKFL 284 (427)
Q Consensus 280 ~a~~~ 284 (427)
+|...
T Consensus 215 ~a~~~ 219 (258)
T 1zth_A 215 QAVTL 219 (258)
T ss_dssp TCEET
T ss_pred ccccC
Confidence 99765
No 395
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.28 E-value=3e-13 Score=137.91 Aligned_cols=151 Identities=13% Similarity=0.118 Sum_probs=82.6
Q ss_pred eeecCCc-ccc-cCCccccCCCCCCEeeeecccceee----cCcchhccccCCEeeeccccCc----ccCCcCccCCCCC
Q 042634 2 FTLVGNQ-FTG-RIPGSIGDLHKLQRLTLEMNKFWGE----IPSSIGNLTLLITLNFAENMLE----GSIPSSLGKCQNL 71 (427)
Q Consensus 2 l~l~~n~-l~~-~~p~~~~~l~~L~~L~l~~n~~~~~----~p~~~~~l~~L~~L~l~~n~l~----~~~p~~~~~l~~L 71 (427)
|+|++|. ++. .++..+..+++|++|+|++|.+++. ++..+.++++|++|++++|.++ +.++..+..+++|
T Consensus 143 L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L 222 (592)
T 3ogk_B 143 LKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSL 222 (592)
T ss_dssp EEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTC
T ss_pred EECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCC
Confidence 5666665 211 1222234667777777777776644 3334456677777777777775 3445555667777
Q ss_pred CeEEccCccCcccCCCCccccccccceeeccCCcCc---CCCCCCCcCCCCCCeEECcCCcccccCCcccccccccccee
Q 042634 72 ILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLN---GPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLV 148 (427)
Q Consensus 72 ~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~---~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~ 148 (427)
++|++++|.+.+ +|..+.++++| +.|+++.+... +..+..+..+++|+.|+++++... .+|..+..+++|+.|+
T Consensus 223 ~~L~L~~~~~~~-l~~~~~~~~~L-~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~ 299 (592)
T 3ogk_B 223 VSVKVGDFEILE-LVGFFKAAANL-EEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLD 299 (592)
T ss_dssp CEEECSSCBGGG-GHHHHHHCTTC-CEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEE
T ss_pred cEEeccCccHHH-HHHHHhhhhHH-HhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEe
Confidence 777777777763 44555566666 45666542221 222334444455555555544322 3444444455555555
Q ss_pred eeeeecc
Q 042634 149 MNGNFFR 155 (427)
Q Consensus 149 l~~n~l~ 155 (427)
+++|.++
T Consensus 300 Ls~~~l~ 306 (592)
T 3ogk_B 300 LLYALLE 306 (592)
T ss_dssp ETTCCCC
T ss_pred cCCCcCC
Confidence 5555443
No 396
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.24 E-value=1.1e-12 Score=133.71 Aligned_cols=131 Identities=11% Similarity=0.124 Sum_probs=88.2
Q ss_pred CCCCCCEeeeecccceeecCcchhcc--ccCCEeeecccc-Ccc-cCCcCccCCCCCCeEEccCccCccc----CCCCcc
Q 042634 19 DLHKLQRLTLEMNKFWGEIPSSIGNL--TLLITLNFAENM-LEG-SIPSSLGKCQNLILLDLSNNNLTGT----TPTEVI 90 (427)
Q Consensus 19 ~l~~L~~L~l~~n~~~~~~p~~~~~l--~~L~~L~l~~n~-l~~-~~p~~~~~l~~L~~l~l~~N~~~~~----~p~~~~ 90 (427)
.+++|+.|+|++|.+++..+..++.+ ++|++|+|++|. ++. .++..+..+++|++|++++|.+++. ++....
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 67788888888888776666667664 348888888776 221 2333344677888888888887655 222344
Q ss_pred ccccccceeeccCCcCc----CCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeee
Q 042634 91 GLSSLSIYLDLSQNQLN----GPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNG 151 (427)
Q Consensus 91 ~l~~l~~~L~l~~n~~~----~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~ 151 (427)
++++| +.|++++|.++ +.++..+.++++|+.|++++|.+.+ +|..+..+++|+.|+++.
T Consensus 190 ~~~~L-~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 190 HNTSL-EVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp HCCCC-CEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred cCCCc-cEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 56677 56888888876 2344445677888888888887774 666666677777777664
No 397
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.09 E-value=2.8e-11 Score=114.89 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=68.6
Q ss_pred ccccchhhhccccccC-CCCCCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 042634 180 RHRNLVKIITSCASVD-FQGNDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHC 258 (427)
Q Consensus 180 ~Hpniv~~~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHr 258 (427)
.|+|+++++....... .-.....++||||++|+.|.++.... ....++.|++.+|.||| ..|||||
T Consensus 163 E~~nL~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~~----------~~~~l~~qll~~l~~lH---~~gIVHr 229 (397)
T 4gyi_A 163 EFAFMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSVP----------DPASLYADLIALILRLA---KHGLIHG 229 (397)
T ss_dssp HHHHHHHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCCS----------CHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred HHHHHHHHHhcCCCCCeeeeccCceEEEEecCCccHhhhcccH----------HHHHHHHHHHHHHHHHH---HCCCcCC
Confidence 4788888876532211 00112347999999988887664321 23568899999999999 8999999
Q ss_pred cccCCceeeCCCC----------ceEecccccccccC
Q 042634 259 DLKPSNVLLDGEL----------TAHVGDFGLAKFLP 285 (427)
Q Consensus 259 Dlkp~NIll~~~~----------~~kL~DFG~a~~~~ 285 (427)
||||.|||+++++ .+.|+||+.+....
T Consensus 230 DLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 230 DFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 9999999997766 48899999887543
No 398
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.08 E-value=5.4e-12 Score=128.59 Aligned_cols=128 Identities=16% Similarity=0.199 Sum_probs=61.6
Q ss_pred CCCCCCEeeeecccceeecCcchh-ccccCCEeeeccc-cCccc-CCcCccCCCCCCeEEccCccCcccCCCCcc----c
Q 042634 19 DLHKLQRLTLEMNKFWGEIPSSIG-NLTLLITLNFAEN-MLEGS-IPSSLGKCQNLILLDLSNNNLTGTTPTEVI----G 91 (427)
Q Consensus 19 ~l~~L~~L~l~~n~~~~~~p~~~~-~l~~L~~L~l~~n-~l~~~-~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~----~ 91 (427)
.+++|+.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|++++|.+++..+.++. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 455666666666666554444454 4566666666665 34321 333333556666666666665543333222 3
Q ss_pred cccccceeeccCCc--CcC-CCCCCCcCCCCCCeEECcCC-cccccCCcccccccccccee
Q 042634 92 LSSLSIYLDLSQNQ--LNG-PLPSNFGILKNLGAIDISEN-KLSGQIPSSIGSCIRLEQLV 148 (427)
Q Consensus 92 l~~l~~~L~l~~n~--~~~-~~p~~~~~l~~L~~l~l~~n-~~~~~~p~~~~~~~~l~~l~ 148 (427)
+++| +.|++++|. ++. .++.-+.++++|+.|++++| .+. .+|..+..+++|+.|+
T Consensus 183 ~~~L-~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~ 241 (594)
T 2p1m_B 183 YTSL-VSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELG 241 (594)
T ss_dssp CCCC-CEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEE
T ss_pred CCcC-cEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcc
Confidence 3455 456666554 110 01111233455666666555 222 2344444444444444
No 399
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.04 E-value=2.3e-12 Score=131.39 Aligned_cols=173 Identities=16% Similarity=0.095 Sum_probs=99.7
Q ss_pred eeecCCcccccCC-ccccCCCCCCEeeeeccccee-ecCcchhccccCCEeee---------ccccCcccCCcCcc-CCC
Q 042634 2 FTLVGNQFTGRIP-GSIGDLHKLQRLTLEMNKFWG-EIPSSIGNLTLLITLNF---------AENMLEGSIPSSLG-KCQ 69 (427)
Q Consensus 2 l~l~~n~l~~~~p-~~~~~l~~L~~L~l~~n~~~~-~~p~~~~~l~~L~~L~l---------~~n~l~~~~p~~~~-~l~ 69 (427)
|+|++|.+++... ..+..+++|+.|++++| ++. .++.....+++|+.|++ +.|.+++.....+. .++
T Consensus 294 L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~ 372 (594)
T 2p1m_B 294 LNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCP 372 (594)
T ss_dssp EECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCT
T ss_pred EEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhch
Confidence 5566666554322 22445666666666665 321 12222234666666666 23444433222332 366
Q ss_pred CCCeEEccCccCcccCCCCcc-ccccccceeecc--C----CcCcCCCC------CCCcCCCCCCeEECcCCcccccCCc
Q 042634 70 NLILLDLSNNNLTGTTPTEVI-GLSSLSIYLDLS--Q----NQLNGPLP------SNFGILKNLGAIDISENKLSGQIPS 136 (427)
Q Consensus 70 ~L~~l~l~~N~~~~~~p~~~~-~l~~l~~~L~l~--~----n~~~~~~p------~~~~~l~~L~~l~l~~n~~~~~~p~ 136 (427)
+|++|+++.|.+++..+..+. .+++| +.|+++ + |.++ ..| ..+..+++|+.|++++ .+++..+.
T Consensus 373 ~L~~L~~~~~~l~~~~~~~l~~~~~~L-~~L~L~~~~~~~~~~l~-~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 373 KLESVLYFCRQMTNAALITIARNRPNM-TRFRLCIIEPKAPDYLT-LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp TCCEEEEEESCCCHHHHHHHHHHCTTC-CEEEEEESSTTCCCTTT-CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred hHHHHHHhcCCcCHHHHHHHHhhCCCc-ceeEeecccCCCccccc-CCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 777777777777654444333 36666 567777 3 4444 222 1255677788888866 55554455
Q ss_pred cccc-cccccceeeeeeeccccCCCCc-ccccCCceeeccCCcc
Q 042634 137 SIGS-CIRLEQLVMNGNFFRGNIPSSL-SSLRGIENLDLSRNNF 178 (427)
Q Consensus 137 ~~~~-~~~l~~l~l~~n~l~~~~p~~l-~~l~~L~~L~L~~N~l 178 (427)
.++. +++|+.|++++|.+++..+..+ ..+++|+.|++++|.+
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 5555 7778888888888765544444 5577888888888776
No 400
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.00 E-value=2.8e-09 Score=102.97 Aligned_cols=160 Identities=13% Similarity=0.118 Sum_probs=90.3
Q ss_pred cccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCC
Q 042634 8 QFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPT 87 (427)
Q Consensus 8 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~ 87 (427)
.++..-+..|.++++|+.++|+.|+++ .+|...-.+++|+.+.|.+| ++..-..+|.++++|+.+++..| ++..-..
T Consensus 167 ~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~ 243 (401)
T 4fdw_A 167 TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQE 243 (401)
T ss_dssp TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTT
T ss_pred CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccc
Confidence 455344467888888888888888887 56654333678888888754 55233345777777888877764 3323333
Q ss_pred CccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCccc-----ccCCccccccccccceeeeeeeccccCCCCc
Q 042634 88 EVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLS-----GQIPSSIGSCIRLEQLVMNGNFFRGNIPSSL 162 (427)
Q Consensus 88 ~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~-----~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l 162 (427)
+|.+ .+| ..+.+ .|.++..-+..|.+|++|+.+++.+|.+. ..-+.+|.+|.+|+.+.+.+ .++.....+|
T Consensus 244 aF~~-~~L-~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF 319 (401)
T 4fdw_A 244 AFRE-SGI-TTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLL 319 (401)
T ss_dssp TTTT-CCC-SEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTT
T ss_pred cccc-CCc-cEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhh
Confidence 4444 444 34555 23343233455556666666666555443 12233455555555555552 2443444455
Q ss_pred ccccCCceeecc
Q 042634 163 SSLRGIENLDLS 174 (427)
Q Consensus 163 ~~l~~L~~L~L~ 174 (427)
.++++|+.+.+.
T Consensus 320 ~~c~~L~~l~lp 331 (401)
T 4fdw_A 320 GGNRKVTQLTIP 331 (401)
T ss_dssp TTCCSCCEEEEC
T ss_pred cCCCCccEEEEC
Confidence 555555555543
No 401
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.97 E-value=3.4e-09 Score=102.36 Aligned_cols=164 Identities=10% Similarity=0.107 Sum_probs=122.7
Q ss_pred eecCCcccccCCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCc
Q 042634 3 TLVGNQFTGRIPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLT 82 (427)
Q Consensus 3 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~ 82 (427)
+|.+| ++..-+..|.+ .+|+.+.|.. .++..-+..|.+|++|+.++|++|.++ .+|......++|+.+.+.+| ++
T Consensus 141 ~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~ 215 (401)
T 4fdw_A 141 VLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LK 215 (401)
T ss_dssp ECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CC
T ss_pred EeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hh
Confidence 44444 55333455666 4799999985 676344467999999999999999999 78877666889999999855 76
Q ss_pred ccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeecc-----cc
Q 042634 83 GTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFR-----GN 157 (427)
Q Consensus 83 ~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~-----~~ 157 (427)
..-..+|.++.+| +.+.+..| ++..-...|.+ .+|+.+.+.+ .++..-+.+|.+|.+|+.+.+.+|.+. ..
T Consensus 216 ~I~~~aF~~~~~L-~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I 291 (401)
T 4fdw_A 216 EIGSQAFLKTSQL-KTIEIPEN-VSTIGQEAFRE-SGITTVKLPN-GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMI 291 (401)
T ss_dssp EECTTTTTTCTTC-CCEECCTT-CCEECTTTTTT-CCCSEEEEET-TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEE
T ss_pred eehhhHhhCCCCC-CEEecCCC-ccCcccccccc-CCccEEEeCC-CccEEChhHhhCCCCCCEEEeCCccccCCcccEE
Confidence 5666788889999 57988875 44344456666 7899999954 455344568889999999999988775 44
Q ss_pred CCCCcccccCCceeeccC
Q 042634 158 IPSSLSSLRGIENLDLSR 175 (427)
Q Consensus 158 ~p~~l~~l~~L~~L~L~~ 175 (427)
.+..|..+++|+.+.+..
T Consensus 292 ~~~aF~~c~~L~~l~l~~ 309 (401)
T 4fdw_A 292 HPYCLEGCPKLARFEIPE 309 (401)
T ss_dssp CTTTTTTCTTCCEECCCT
T ss_pred CHHHhhCCccCCeEEeCC
Confidence 567888999999998863
No 402
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=7.3e-10 Score=105.23 Aligned_cols=160 Identities=14% Similarity=0.164 Sum_probs=111.6
Q ss_pred cccCCCCCCEeeeecccc---------eeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCC
Q 042634 16 SIGDLHKLQRLTLEMNKF---------WGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTP 86 (427)
Q Consensus 16 ~~~~l~~L~~L~l~~n~~---------~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p 86 (427)
.+..+++|+.|.+..+.. .+.++..+..+++|+.|+|++|.-. .+|+ + .+++|++|++..|.++....
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l 210 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVV 210 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHH
Confidence 356788999999976533 1235556678899999999988422 4554 4 38899999999988864333
Q ss_pred CCcc--ccccccceeeccC--CcCcCC-----CCCCC--cCCCCCCeEECcCCcccccCCcccc---ccccccceeeeee
Q 042634 87 TEVI--GLSSLSIYLDLSQ--NQLNGP-----LPSNF--GILKNLGAIDISENKLSGQIPSSIG---SCIRLEQLVMNGN 152 (427)
Q Consensus 87 ~~~~--~l~~l~~~L~l~~--n~~~~~-----~p~~~--~~l~~L~~l~l~~n~~~~~~p~~~~---~~~~l~~l~l~~n 152 (427)
..+. .+++| +.|+|+. |...+. +...+ ..+++|+.|+|.+|.+++..+..+. .+++|+.|+++.|
T Consensus 211 ~~l~~~~lp~L-~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n 289 (362)
T 2ra8_A 211 EDILGSDLPNL-EKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAG 289 (362)
T ss_dssp HHHHHSBCTTC-CEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSS
T ss_pred HHHHHccCCCC-cEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCC
Confidence 3333 57788 5688753 332211 11122 3578999999999998865444443 5889999999999
Q ss_pred ecccc----CCCCcccccCCceeeccCCccc
Q 042634 153 FFRGN----IPSSLSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 153 ~l~~~----~p~~l~~l~~L~~L~L~~N~ll 179 (427)
.+++. ++..+..+++|+.|+++.|.+.
T Consensus 290 ~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 290 VLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 99864 3455567899999999988764
No 403
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.80 E-value=2.3e-10 Score=103.41 Aligned_cols=40 Identities=38% Similarity=0.539 Sum_probs=20.5
Q ss_pred ccccCCEeeeccccCcc--cCCcCccCCCCCCeEEccCccCc
Q 042634 43 NLTLLITLNFAENMLEG--SIPSSLGKCQNLILLDLSNNNLT 82 (427)
Q Consensus 43 ~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~l~l~~N~~~ 82 (427)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 34555555555555554 33344445555555555555554
No 404
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.73 E-value=1.3e-09 Score=103.54 Aligned_cols=159 Identities=18% Similarity=0.199 Sum_probs=109.1
Q ss_pred CCccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCcc--CCCCCCeEEccC--ccCcccC---
Q 042634 13 IPGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLG--KCQNLILLDLSN--NNLTGTT--- 85 (427)
Q Consensus 13 ~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~--~l~~L~~l~l~~--N~~~~~~--- 85 (427)
++..+..+++|+.|+|++|.-. .+|. + .+++|+.|+|+.|.++......++ .+++|++|+|+. |...+..
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~ 240 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMN 240 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGG
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHH
Confidence 5566788899999999988422 3555 4 389999999999988755444454 789999999864 3322221
Q ss_pred --CCCc--cccccccceeeccCCcCcCCCCCCC---cCCCCCCeEECcCCccccc----CCccccccccccceeeeeeec
Q 042634 86 --PTEV--IGLSSLSIYLDLSQNQLNGPLPSNF---GILKNLGAIDISENKLSGQ----IPSSIGSCIRLEQLVMNGNFF 154 (427)
Q Consensus 86 --p~~~--~~l~~l~~~L~l~~n~~~~~~p~~~---~~l~~L~~l~l~~n~~~~~----~p~~~~~~~~l~~l~l~~n~l 154 (427)
...+ ..+++| +.|+|.+|.++...+..+ ..+++|+.|+|+.|.+++. ++..+..+++|+.|+++.|.+
T Consensus 241 ~l~~~l~~~~~p~L-r~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 241 VFRPLFSKDRFPNL-KWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp GTGGGSCTTTCTTC-CEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred HHHHHHhcCCCCCc-CEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 1112 246788 689999999864332222 3578999999999999864 445556789999999999998
Q ss_pred cccCCCCccc-ccCCceeeccCCc
Q 042634 155 RGNIPSSLSS-LRGIENLDLSRNN 177 (427)
Q Consensus 155 ~~~~p~~l~~-l~~L~~L~L~~N~ 177 (427)
+...-..+.. + ...++++.+.
T Consensus 320 ~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 320 SDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp CHHHHHHHHHHC--CSEEECCSBC
T ss_pred CHHHHHHHHHHc--CCEEEecCCc
Confidence 7543333332 2 2456666554
No 405
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.72 E-value=2.7e-09 Score=96.34 Aligned_cols=83 Identities=24% Similarity=0.280 Sum_probs=63.1
Q ss_pred eeecCCc---ccccCCccccCCCCCCEeeeeccccee--ecCcchhccccCCEeeeccccCcccCCcCccCCC--CCCeE
Q 042634 2 FTLVGNQ---FTGRIPGSIGDLHKLQRLTLEMNKFWG--EIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQ--NLILL 74 (427)
Q Consensus 2 l~l~~n~---l~~~~p~~~~~l~~L~~L~l~~n~~~~--~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~--~L~~l 74 (427)
++++.|. +.+.++....++++|+.|+|++|+|++ .+|..++.+++|+.|+|++|++++. ..+..++ +|++|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 3456663 333333333678999999999999997 5567788999999999999999953 3455555 88899
Q ss_pred EccCccCcccCC
Q 042634 75 DLSNNNLTGTTP 86 (427)
Q Consensus 75 ~l~~N~~~~~~p 86 (427)
+|++|.+++.+|
T Consensus 226 ~L~~Npl~~~~~ 237 (267)
T 3rw6_A 226 WLDGNSLCDTFR 237 (267)
T ss_dssp ECTTSTTGGGCS
T ss_pred EccCCcCccccC
Confidence 999999887666
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.54 E-value=5.1e-09 Score=89.83 Aligned_cols=118 Identities=12% Similarity=0.077 Sum_probs=58.9
Q ss_pred ccCCCCCCEeeeecc-cceee----cCcchhccccCCEeeeccccCccc----CCcCccCCCCCCeEEccCccCcccCCC
Q 042634 17 IGDLHKLQRLTLEMN-KFWGE----IPSSIGNLTLLITLNFAENMLEGS----IPSSLGKCQNLILLDLSNNNLTGTTPT 87 (427)
Q Consensus 17 ~~~l~~L~~L~l~~n-~~~~~----~p~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~l~l~~N~~~~~~p~ 87 (427)
+...++|+.|+|++| .+... +...+...++|++|+|++|.++.. +...+...++|++|+|++|.++..-..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 444555666666665 55421 223334445566666666655521 222233334555555555555421100
Q ss_pred CccccccccceeeccCCcCcCCCCCCCcCCCCCCeEEC--cCCccccc----CCccccccccccceeeeeeecc
Q 042634 88 EVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDI--SENKLSGQ----IPSSIGSCIRLEQLVMNGNFFR 155 (427)
Q Consensus 88 ~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l--~~n~~~~~----~p~~~~~~~~l~~l~l~~n~l~ 155 (427)
.+...+...+.|+.|+| ++|.++.. +...+...++|+.|++++|.+.
T Consensus 112 ---------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ---------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp ---------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred ---------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 12334444556777777 56666543 2233444566777777777664
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.45 E-value=1.1e-08 Score=87.73 Aligned_cols=122 Identities=11% Similarity=0.109 Sum_probs=83.5
Q ss_pred cCcchhccccCCEeeeccc-cCccc----CCcCccCCCCCCeEEccCccCcccCCCCccccccccceeeccCCcCcCCCC
Q 042634 37 IPSSIGNLTLLITLNFAEN-MLEGS----IPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLP 111 (427)
Q Consensus 37 ~p~~~~~l~~L~~L~l~~n-~l~~~----~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p 111 (427)
+...+...++|+.|+|++| .++.. +...+...++|++|+|++|.+...-.. .+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~---------------------~l~ 86 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAF---------------------ALA 86 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHH---------------------HHH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHH---------------------HHH
Confidence 3345566788888888888 77632 344455567788888888877521111 111
Q ss_pred CCCcCCCCCCeEECcCCccccc----CCccccccccccceee--eeeeccccC----CCCcccccCCceeeccCCccc
Q 042634 112 SNFGILKNLGAIDISENKLSGQ----IPSSIGSCIRLEQLVM--NGNFFRGNI----PSSLSSLRGIENLDLSRNNFI 179 (427)
Q Consensus 112 ~~~~~l~~L~~l~l~~n~~~~~----~p~~~~~~~~l~~l~l--~~n~l~~~~----p~~l~~l~~L~~L~L~~N~ll 179 (427)
..+...+.|+.|+|++|.++.. +...+...++|+.|++ +.|.+.... ...+...++|+.|+++.|.+.
T Consensus 87 ~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 87 EMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2233456788899999988753 4556777889999999 889997653 334455689999999998864
No 408
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.25 E-value=1.7e-07 Score=86.91 Aligned_cols=123 Identities=18% Similarity=0.139 Sum_probs=82.4
Q ss_pred ccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC-----------------------------
Q 042634 201 SEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC----------------------------- 251 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~----------------------------- 251 (427)
..++|||+++|.++.+... ..++..++..++.+++..+..||...
T Consensus 90 ~~~~vm~~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
T 3sg8_A 90 MSFAGFTKIKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSR 163 (304)
T ss_dssp CSCEEEECCCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTT
T ss_pred cceEEEcccCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcc
Confidence 4578999999888754321 33677778888888888888888510
Q ss_pred --------------------------CCCeeeccccCCceeeCC--CCceEecccccccccCCcC--CCcccc---cccc
Q 042634 252 --------------------------ETPIVHCDLKPSNVLLDG--ELTAHVGDFGLAKFLPEAT--NNFFNF---QIAE 298 (427)
Q Consensus 252 --------------------------~~~ivHrDlkp~NIll~~--~~~~kL~DFG~a~~~~~~~--~~~~~y---~aPE 298 (427)
...++|+|++|.||+++. ...+.|+||+.+....... .....+ ..|+
T Consensus 164 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~ 243 (304)
T 3sg8_A 164 ELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGME 243 (304)
T ss_dssp TSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHH
T ss_pred cCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHH
Confidence 135899999999999988 5678999999987643211 000000 1121
Q ss_pred ccC------CC--------CcCccccchhHHHHHHHHHhCCCCCC
Q 042634 299 YGM------GS--------EVSTSGDVYSFGILLLETFTGKRPTN 329 (427)
Q Consensus 299 ~~~------~~--------~~~~~~DiwS~G~vl~ell~g~~pf~ 329 (427)
... +. ......+.|++|.++|.+.+|..+|.
T Consensus 244 ~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 244 FVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 110 00 01122588999999999999998763
No 409
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.22 E-value=3.5e-07 Score=82.74 Aligned_cols=75 Identities=17% Similarity=0.074 Sum_probs=57.2
Q ss_pred CCccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC---------------------------
Q 042634 199 NDSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC--------------------------- 251 (427)
Q Consensus 199 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~--------------------------- 251 (427)
....++||||++|.+|.+.+.. ......++.++++++..||...
T Consensus 82 ~~~~~lv~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (263)
T 3tm0_A 82 DGWSNLLMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD 152 (263)
T ss_dssp TTEEEEEEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred CCceEEEEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccc
Confidence 3467899999999888765321 1123468889999999999610
Q ss_pred -----------------------------CCCeeeccccCCceeeCCCCceEeccccccc
Q 042634 252 -----------------------------ETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282 (427)
Q Consensus 252 -----------------------------~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 282 (427)
...++|+|++|.||+++.+..+.|+||+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999877667899999774
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.17 E-value=2.8e-06 Score=80.62 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=61.8
Q ss_pred ccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC-----------------------------
Q 042634 201 SEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC----------------------------- 251 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~----------------------------- 251 (427)
..++||||++|..+.+... ..++..++..++.++++.|..||...
T Consensus 115 ~~~~vme~v~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (359)
T 3dxp_A 115 RAFYIMEFVSGRVLWDQSL------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKL 188 (359)
T ss_dssp SCEEEEECCCCBCCCCTTC------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCCeecCCCcc------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHh
Confidence 4689999999888754221 23677888899999999999999620
Q ss_pred --------------------------CCCeeeccccCCceeeCCCC--ceEeccccccccc
Q 042634 252 --------------------------ETPIVHCDLKPSNVLLDGEL--TAHVGDFGLAKFL 284 (427)
Q Consensus 252 --------------------------~~~ivHrDlkp~NIll~~~~--~~kL~DFG~a~~~ 284 (427)
...++|+|+++.||+++.++ .+.|+||+.+...
T Consensus 189 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 189 SETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred cCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 25799999999999998765 3689999988753
No 411
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.09 E-value=1.5e-06 Score=78.24 Aligned_cols=72 Identities=17% Similarity=0.109 Sum_probs=53.0
Q ss_pred CccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC----------------------------
Q 042634 200 DSEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC---------------------------- 251 (427)
Q Consensus 200 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~---------------------------- 251 (427)
...++||||++|.++. ... .+ ...++.++++.+..||...
T Consensus 88 ~~~~~v~e~i~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
T 1nd4_A 88 GRDWLLLGEVPGQDLL--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQ 155 (264)
T ss_dssp SCEEEEEECCSSEETT--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCT
T ss_pred CCCEEEEEecCCcccC--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccc
Confidence 4579999999998884 211 11 1256778888888888421
Q ss_pred ---------------------------CCCeeeccccCCceeeCCCCceEecccccccc
Q 042634 252 ---------------------------ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKF 283 (427)
Q Consensus 252 ---------------------------~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 283 (427)
..+++|+|++|.||+++.+..++|+|||.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 156 DDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998877778999998753
No 412
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.83 E-value=0.00014 Score=69.85 Aligned_cols=152 Identities=15% Similarity=0.095 Sum_probs=110.7
Q ss_pred ccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCcccccc
Q 042634 15 GSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSS 94 (427)
Q Consensus 15 ~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~ 94 (427)
.......+|+.+.+..+ ++..-...+.++..|+.+.+..+... .....+..+.+|+.+....+.+. ...+.++.+
T Consensus 224 ~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~ 298 (394)
T 4fs7_A 224 DFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSS 298 (394)
T ss_dssp TTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTT
T ss_pred hhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccc
Confidence 34455578888888754 44233456888999999999888665 55667888888998888776543 235667778
Q ss_pred ccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeecc
Q 042634 95 LSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLS 174 (427)
Q Consensus 95 l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~ 174 (427)
| ..+.+.++ ++..-...|.+|++|+.+++.++ ++..-..+|.+|.+|+.+.+..| ++.....+|.++.+|+.+++.
T Consensus 299 L-~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 299 L-TEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp C-CEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred c-cccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 8 56777655 54344567889999999999765 55233457889999999999877 665666788999999998875
Q ss_pred C
Q 042634 175 R 175 (427)
Q Consensus 175 ~ 175 (427)
.
T Consensus 375 ~ 375 (394)
T 4fs7_A 375 K 375 (394)
T ss_dssp G
T ss_pred C
Confidence 4
No 413
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.83 E-value=0.00015 Score=69.53 Aligned_cols=153 Identities=11% Similarity=0.082 Sum_probs=111.3
Q ss_pred CccccCCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccc
Q 042634 14 PGSIGDLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLS 93 (427)
Q Consensus 14 p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~ 93 (427)
...+.+...|+.+.+..+... +.......+.|+.+.+.++. +..-...+..+++|+.+.+..+... .....+..+.
T Consensus 201 ~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~ 276 (394)
T 4fs7_A 201 DYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCS 276 (394)
T ss_dssp TTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCT
T ss_pred chhhccccccceeecCCCceE--eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eecccccccc
Confidence 456788889999998876554 45556667889999887554 4133456788899999999888665 5556677777
Q ss_pred cccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeec
Q 042634 94 SLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDL 173 (427)
Q Consensus 94 ~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L 173 (427)
.+ ..+....+.+ ....+..+.+|+.+.+.++ ++..-..+|.+|.+|+.+++.++ ++.....+|.++++|+.+.+
T Consensus 277 ~l-~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~l 350 (394)
T 4fs7_A 277 GL-KKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINF 350 (394)
T ss_dssp TC-CEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECC
T ss_pred cc-ceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEE
Confidence 77 4565555443 2356888999999999876 45233457889999999999755 66555678899999999987
Q ss_pred cCC
Q 042634 174 SRN 176 (427)
Q Consensus 174 ~~N 176 (427)
..+
T Consensus 351 p~~ 353 (394)
T 4fs7_A 351 PLS 353 (394)
T ss_dssp CTT
T ss_pred Ccc
Confidence 643
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.71 E-value=0.00036 Score=66.37 Aligned_cols=149 Identities=8% Similarity=0.054 Sum_probs=73.0
Q ss_pred CCCCCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccce
Q 042634 19 DLHKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIY 98 (427)
Q Consensus 19 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~ 98 (427)
....+..+.+..+... .....+..+..|+.+.+..+. +..-..++..+++|+.+.+..+ ++..-..++.++.++ ..
T Consensus 192 ~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~~-~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l-~~ 267 (379)
T 4h09_A 192 AAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSGV-TTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTAL-KT 267 (379)
T ss_dssp TTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTTC-CEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTC-CE
T ss_pred ccccccccccccceeE-Eeecccccccccceeeeccce-eEEccccccCCccceEEEcCCC-ccEeCccccceeehh-cc
Confidence 3344444444332222 333445555566666554442 2133344555566666666544 332333445555555 34
Q ss_pred eeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCCCCcccccCCceeec
Q 042634 99 LDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDL 173 (427)
Q Consensus 99 L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L 173 (427)
+.+..+ +...-...|.+|++|+.+.+.++.++..-..+|.+|.+|+.+.+.++ ++.....+|.++++|+.+.+
T Consensus 268 i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 268 LNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp EEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred cccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 544332 22122345566666666666665555222335566666666666543 33333455666666665554
No 415
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.67 E-value=0.00017 Score=69.14 Aligned_cols=145 Identities=17% Similarity=0.297 Sum_probs=94.8
Q ss_pred CCCEeeeecccceeecCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCccCcccCCCCccccccccceeec
Q 042634 22 KLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDL 101 (427)
Q Consensus 22 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l 101 (427)
.+..+.+. +.++..-...|.+++.|+.+.+.++..+ .-..++.++++|+.+.+. +.++......|.++.+| +.+.+
T Consensus 243 ~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L-~~i~l 318 (394)
T 4gt6_A 243 EDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISL-KSIDI 318 (394)
T ss_dssp CCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTC-CEEEC
T ss_pred ccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCc-CEEEe
Confidence 44445443 3444233456888888998888776654 445667888889988886 44554555678888888 56888
Q ss_pred cCCcCcCCCCCCCcCCCCCCeEECcCCcccccCC-ccccccccccceeeeeeeccccCCCCcccccCCceeeccCC
Q 042634 102 SQNQLNGPLPSNFGILKNLGAIDISENKLSGQIP-SSIGSCIRLEQLVMNGNFFRGNIPSSLSSLRGIENLDLSRN 176 (427)
Q Consensus 102 ~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p-~~~~~~~~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N 176 (427)
..+ ++..-...|.+|.+|+.+.+..+ ++ .|. .+|.+|.+|+.+.+.++.... ..+...++|+.+.+..|
T Consensus 319 p~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 319 PEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC--------
T ss_pred CCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCC
Confidence 654 44344577889999999999765 55 454 478889999999998876542 34556677777766544
No 416
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.67 E-value=1.4e-05 Score=66.99 Aligned_cols=84 Identities=13% Similarity=0.139 Sum_probs=59.9
Q ss_pred CCCCEeeeecccceeecCcchhccccCCEeeecccc-CcccCCcCccCC----CCCCeEEccCcc-CcccCCCCcccccc
Q 042634 21 HKLQRLTLEMNKFWGEIPSSIGNLTLLITLNFAENM-LEGSIPSSLGKC----QNLILLDLSNNN-LTGTTPTEVIGLSS 94 (427)
Q Consensus 21 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l----~~L~~l~l~~N~-~~~~~p~~~~~l~~ 94 (427)
-+|+.|||+++.++..--..+.++++|+.|+|++|. ++..-=..++.+ ++|++|++++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 478999999988874434567888999999999985 664433445554 369999999975 65332234567778
Q ss_pred ccceeeccCCc
Q 042634 95 LSIYLDLSQNQ 105 (427)
Q Consensus 95 l~~~L~l~~n~ 105 (427)
| +.|+|++++
T Consensus 141 L-~~L~L~~c~ 150 (176)
T 3e4g_A 141 L-KYLFLSDLP 150 (176)
T ss_dssp C-CEEEEESCT
T ss_pred C-CEEECCCCC
Confidence 8 678888876
No 417
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.62 E-value=0.00033 Score=67.09 Aligned_cols=157 Identities=13% Similarity=0.234 Sum_probs=108.9
Q ss_pred CccccCCCCCCEeeeecccceeecCcchh--------------ccccCCEeeeccccCcccCCcCccCCCCCCeEEccCc
Q 042634 14 PGSIGDLHKLQRLTLEMNKFWGEIPSSIG--------------NLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNN 79 (427)
Q Consensus 14 p~~~~~l~~L~~L~l~~n~~~~~~p~~~~--------------~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 79 (427)
...+.+..+|+......+... .+...+. ....+..+.+.++ ++..-..+|.++++|+.+.+..+
T Consensus 198 ~~af~~c~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~-v~~i~~~aF~~c~~L~~i~lp~~ 275 (394)
T 4gt6_A 198 TNAFSECFALSTITSDSESYP-AIDNVLYEKSANGDYALIRYPSQREDPAFKIPNG-VARIETHAFDSCAYLASVKMPDS 275 (394)
T ss_dssp TTTTTTCTTCCEEEECCSSSC-BSSSCEEEECTTSCEEEEECCTTCCCSEEECCTT-EEEECTTTTTTCSSCCEEECCTT
T ss_pred cchhhhccccceecccccccc-cccceeecccccccccccccccccccceEEcCCc-ceEcccceeeecccccEEecccc
Confidence 456788888888887766554 3332221 2233444444333 33233456888999999999877
Q ss_pred cCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccccccceeeeeeeccccCC
Q 042634 80 NLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNGNFFRGNIP 159 (427)
Q Consensus 80 ~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~n~l~~~~p 159 (427)
..+ .-..+|.++.+| +.+.+. +.++..-...|.+|.+|+.+++..+ ++..-..+|.+|.+|+.+.+.++ ++....
T Consensus 276 ~~~-I~~~aF~~c~~L-~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~ 350 (394)
T 4gt6_A 276 VVS-IGTGAFMNCPAL-QDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPE 350 (394)
T ss_dssp CCE-ECTTTTTTCTTC-CEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCG
T ss_pred cce-ecCccccccccc-ccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhH
Confidence 654 555678888888 568775 4455344578999999999999876 45233458889999999999765 555556
Q ss_pred CCcccccCCceeeccCCc
Q 042634 160 SSLSSLRGIENLDLSRNN 177 (427)
Q Consensus 160 ~~l~~l~~L~~L~L~~N~ 177 (427)
.+|.++++|+.+++.++.
T Consensus 351 ~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 351 SAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp GGGTTCTTCCEEEESSCH
T ss_pred hHhhCCCCCCEEEECCce
Confidence 789999999999988754
No 418
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.62 E-value=0.00057 Score=64.98 Aligned_cols=107 Identities=12% Similarity=0.143 Sum_probs=46.2
Q ss_pred cCccCCCCCCeEEccCccCcccCCCCccccccccceeeccCCcCcCCCCCCCcCCCCCCeEECcCCcccccCCccccccc
Q 042634 63 SSLGKCQNLILLDLSNNNLTGTTPTEVIGLSSLSIYLDLSQNQLNGPLPSNFGILKNLGAIDISENKLSGQIPSSIGSCI 142 (427)
Q Consensus 63 ~~~~~l~~L~~l~l~~N~~~~~~p~~~~~l~~l~~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~ 142 (427)
..+..+++|+.+.+..+ ++......+.++..| ..+.+..+ ++..-...|.++.+|+.+.+..+ +...-..+|.+|.
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L-~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKAL-DEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSC-CEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccc-eEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 33444445555554433 221223334444444 33444333 22122334445555555555433 2211122444555
Q ss_pred cccceeeeeeeccccCCCCcccccCCceeec
Q 042634 143 RLEQLVMNGNFFRGNIPSSLSSLRGIENLDL 173 (427)
Q Consensus 143 ~l~~l~l~~n~l~~~~p~~l~~l~~L~~L~L 173 (427)
+|+.+.+.++.++.....+|.++.+|+.+.+
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEc
Confidence 5555555555444443444555555555544
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.57 E-value=1.3e-05 Score=67.11 Aligned_cols=94 Identities=9% Similarity=0.076 Sum_probs=66.0
Q ss_pred cCcchhccccCCEeeeccccCcccCCcCccCCCCCCeEEccCcc-CcccCCCCcccc----ccccceeeccCCc-CcCCC
Q 042634 37 IPSSIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSNNN-LTGTTPTEVIGL----SSLSIYLDLSQNQ-LNGPL 110 (427)
Q Consensus 37 ~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~-~~~~~p~~~~~l----~~l~~~L~l~~n~-~~~~~ 110 (427)
+|.....--+|+.||++++.++..--..+.++++|++|+|++|. ++..-=..+..+ ++| ++|+|++|. ++..-
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L-~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSM-LEMEIISCGNVTDKG 131 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHC-CEEEEESCTTCCHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCC-CEEEcCCCCcCCHHH
Confidence 45433333479999999999986555668899999999999996 552211223332 357 689999986 76432
Q ss_pred CCCCcCCCCCCeEECcCCc-cc
Q 042634 111 PSNFGILKNLGAIDISENK-LS 131 (427)
Q Consensus 111 p~~~~~l~~L~~l~l~~n~-~~ 131 (427)
=..+.++++|+.|+++++. ++
T Consensus 132 l~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp HHHGGGCTTCCEEEEESCTTCC
T ss_pred HHHHhcCCCCCEEECCCCCCCC
Confidence 2456789999999999874 44
No 420
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.39 E-value=0.00015 Score=67.50 Aligned_cols=77 Identities=19% Similarity=0.207 Sum_probs=58.0
Q ss_pred ccceeeeeecCCCcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcC-----------------------------
Q 042634 201 SEALVYEFMVNGSLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYC----------------------------- 251 (427)
Q Consensus 201 ~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~----------------------------- 251 (427)
..++||||++|.++..... ..++..+...++.+++..+..||...
T Consensus 101 ~~~lvme~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (320)
T 3r70_A 101 DRFNIMKYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISI 174 (320)
T ss_dssp SSCEEEECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHH
Confidence 4589999999988763221 23566667777888888888887431
Q ss_pred -------------------------------CCCeeeccccCCceeeCCCCceEecccccccc
Q 042634 252 -------------------------------ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKF 283 (427)
Q Consensus 252 -------------------------------~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 283 (427)
...++|+|++|.||+++.+..+.|+||+.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 175 LEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12359999999999999877789999998864
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.07 E-value=0.001 Score=52.82 Aligned_cols=15 Identities=20% Similarity=0.251 Sum_probs=6.3
Q ss_pred CCCCCCeEECcCCcc
Q 042634 116 ILKNLGAIDISENKL 130 (427)
Q Consensus 116 ~l~~L~~l~l~~n~~ 130 (427)
.+++|+.|+|++|.+
T Consensus 53 ~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 53 ALPALRTAHLGANPW 67 (130)
T ss_dssp GCTTCCEEECCSSCC
T ss_pred hccccCEEEecCCCe
Confidence 333444444444433
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.03 E-value=0.00068 Score=53.88 Aligned_cols=54 Identities=17% Similarity=0.179 Sum_probs=25.0
Q ss_pred Eeeeecccce-eecCcchhccccCCEeeeccccCcccCCcC-ccCCCCCCeEEccCccC
Q 042634 25 RLTLEMNKFW-GEIPSSIGNLTLLITLNFAENMLEGSIPSS-LGKCQNLILLDLSNNNL 81 (427)
Q Consensus 25 ~L~l~~n~~~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~l~l~~N~~ 81 (427)
.++-+++.++ ..+|..+ -++|+.|+|++|+|+ .+|.. |..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCe
Confidence 4455555543 1344332 123555555555555 34332 34455555555555544
No 423
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=96.96 E-value=0.00074 Score=62.26 Aligned_cols=32 Identities=28% Similarity=0.452 Sum_probs=26.0
Q ss_pred CCCeeeccccCCceeeCC---CCc-eEecccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDG---ELT-AHVGDFGLAKF 283 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~---~~~-~kL~DFG~a~~ 283 (427)
...++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 189 ~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 189 TPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp CCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred CCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 346799999999999987 344 58999998754
No 424
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.92 E-value=0.0019 Score=55.49 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=62.9
Q ss_pred CcccccccchhhhhccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcCCCcc
Q 042634 213 SLEEWLHPNREALKNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFF 292 (427)
Q Consensus 213 ~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~ 292 (427)
+|.+.|+... .++++.+++.++.|.+.+|.-.-. .+.-..+=+.|..|++..+|.+-..+ +.+. ....
T Consensus 34 SL~eIL~~~~---~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------~~~~ 101 (229)
T 2yle_A 34 SLEEILRLYN---QPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------AGEP 101 (229)
T ss_dssp EHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHHHcC---CCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc------cccc
Confidence 6777776544 679999999999999999877621 11111233456888898888887764 2211 1233
Q ss_pred ccccccccCCCCcCccccchhHHHHHHHHHhC
Q 042634 293 NFQIAEYGMGSEVSTSGDVYSFGILLLETFTG 324 (427)
Q Consensus 293 ~y~aPE~~~~~~~~~~~DiwS~G~vl~ell~g 324 (427)
.+.|||... ...+.+.=|||+|+++|..+--
T Consensus 102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp -----CCSS-SSSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCChhhcc-ccchHHHHHHHHHHHHHHHhhc
Confidence 466888763 3446778899999999998863
No 425
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.56 E-value=0.00024 Score=60.54 Aligned_cols=63 Identities=16% Similarity=0.173 Sum_probs=30.1
Q ss_pred CCCCCEeeeecc-ccee----ecCcchhccccCCEeeeccccCcccCCcCcc----CCCCCCeEEccCccCc
Q 042634 20 LHKLQRLTLEMN-KFWG----EIPSSIGNLTLLITLNFAENMLEGSIPSSLG----KCQNLILLDLSNNNLT 82 (427)
Q Consensus 20 l~~L~~L~l~~n-~~~~----~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~----~l~~L~~l~l~~N~~~ 82 (427)
-+.|+.|+|++| .+.. .+-..+..=+.|+.|+|++|.++..--..+. .=++|++|+|++|.|.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 345666666653 4431 1223344445566666666666532222222 2234555555555554
No 426
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=96.35 E-value=0.0017 Score=58.38 Aligned_cols=29 Identities=21% Similarity=0.286 Sum_probs=25.8
Q ss_pred eeeccccCCceeeCCCCceEecccccccc
Q 042634 255 IVHCDLKPSNVLLDGELTAHVGDFGLAKF 283 (427)
Q Consensus 255 ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 283 (427)
++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 195 l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 195 VTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp EECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred EEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 79999999999999887778999998753
No 427
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.35 E-value=0.00047 Score=58.73 Aligned_cols=81 Identities=12% Similarity=0.126 Sum_probs=56.3
Q ss_pred CeeecCC-ccccc----CCccccCCCCCCEeeeecccceeecCc----chhccccCCEeeeccccCcccC----CcCccC
Q 042634 1 AFTLVGN-QFTGR----IPGSIGDLHKLQRLTLEMNKFWGEIPS----SIGNLTLLITLNFAENMLEGSI----PSSLGK 67 (427)
Q Consensus 1 ~l~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~n~~~~~~p~----~~~~l~~L~~L~l~~n~l~~~~----p~~~~~ 67 (427)
+|+|++| ++... +-..+..=+.|+.|+|++|.+...--. .+..=+.|+.|+|++|.|+..- -..+..
T Consensus 45 ~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~ 124 (197)
T 1pgv_A 45 EVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLV 124 (197)
T ss_dssp EEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTT
T ss_pred EEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhh
Confidence 3788885 77532 335567778999999999999743323 3445578999999999999532 223334
Q ss_pred CCCCCeEEccCccC
Q 042634 68 CQNLILLDLSNNNL 81 (427)
Q Consensus 68 l~~L~~l~l~~N~~ 81 (427)
=+.|++|+|++|..
T Consensus 125 N~tL~~L~L~n~~~ 138 (197)
T 1pgv_A 125 TQSIVEFKADNQRQ 138 (197)
T ss_dssp TCCCSEEECCCCSS
T ss_pred CCceeEEECCCCcC
Confidence 45688888886533
No 428
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=96.33 E-value=0.0065 Score=57.03 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=27.1
Q ss_pred CCCeeeccccCCceeeCCCCceEecccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKF 283 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 283 (427)
...++|+|+.+.||+++++..+.|+||+.+..
T Consensus 221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp CCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred CceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 45789999999999999655679999998854
No 429
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=95.90 E-value=0.0044 Score=58.48 Aligned_cols=32 Identities=34% Similarity=0.396 Sum_probs=28.2
Q ss_pred CCeeeccccCCceeeCCCCceEeccccccccc
Q 042634 253 TPIVHCDLKPSNVLLDGELTAHVGDFGLAKFL 284 (427)
Q Consensus 253 ~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 284 (427)
..++|+|+++.||+++.+..+.|+||+.+...
T Consensus 213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp CEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred cEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 56899999999999988878899999988754
No 430
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=95.39 E-value=0.017 Score=53.62 Aligned_cols=31 Identities=23% Similarity=0.239 Sum_probs=28.2
Q ss_pred CCCeeeccccCCceeeCCCCceEeccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 282 (427)
..+++|+|+++.||+++.++.+.|+||+.+.
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 5789999999999999888899999999774
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=94.35 E-value=0.04 Score=52.94 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=48.1
Q ss_pred CCCeeeccccCCceeeCCCCceEecccccccccCCcC-C------CccccccccccCCCC---cCccccchhHHHHHHHH
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEAT-N------NFFNFQIAEYGMGSE---VSTSGDVYSFGILLLET 321 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-~------~~~~y~aPE~~~~~~---~~~~~DiwS~G~vl~el 321 (427)
...++|+|++|.|||++.++ ++++||+.+....... . -...|++|+...... -....++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 78899999999999998776 9999999987654321 1 113466666543211 12234455777777777
Q ss_pred HhC
Q 042634 322 FTG 324 (427)
Q Consensus 322 l~g 324 (427)
+.+
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=93.54 E-value=0.15 Score=46.38 Aligned_cols=30 Identities=23% Similarity=0.315 Sum_probs=25.1
Q ss_pred CCeeeccccCCceeeCCCCceEecccccccc
Q 042634 253 TPIVHCDLKPSNVLLDGELTAHVGDFGLAKF 283 (427)
Q Consensus 253 ~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 283 (427)
..++|+|+.+.||+ ..++.+.++||..+..
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 45899999999999 5566789999988754
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=92.04 E-value=0.18 Score=46.51 Aligned_cols=32 Identities=34% Similarity=0.352 Sum_probs=28.0
Q ss_pred CCCeeeccccCCceeeCCC----CceEecccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGE----LTAHVGDFGLAKF 283 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~----~~~kL~DFG~a~~ 283 (427)
...++|+|+.+.||+++.+ ..+.|+||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 5689999999999999874 6889999998864
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=91.12 E-value=0.064 Score=49.26 Aligned_cols=31 Identities=29% Similarity=0.384 Sum_probs=26.9
Q ss_pred CCCeeeccccCCceeeCCCCceEeccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 282 (427)
..+++|+|+++.||+++.+..+.++||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 4679999999999999987667899998775
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=91.07 E-value=0.22 Score=45.75 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=26.1
Q ss_pred CCCeeeccccCCceeeCCCCceEecccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKF 283 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 283 (427)
...++|+|+++.||+++ + .+.++||+.+..
T Consensus 194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 56789999999999999 4 899999988754
No 436
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.46 E-value=0.52 Score=44.77 Aligned_cols=29 Identities=24% Similarity=0.416 Sum_probs=24.2
Q ss_pred eeeccccCCceee------CCCCceEecccccccc
Q 042634 255 IVHCDLKPSNVLL------DGELTAHVGDFGLAKF 283 (427)
Q Consensus 255 ivHrDlkp~NIll------~~~~~~kL~DFG~a~~ 283 (427)
++|+|+.+.|||+ +++..++++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4567899999987753
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=86.53 E-value=0.61 Score=45.20 Aligned_cols=17 Identities=35% Similarity=0.653 Sum_probs=15.1
Q ss_pred CCCeeeccccCCceeeC
Q 042634 252 ETPIVHCDLKPSNVLLD 268 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~ 268 (427)
...++|+|+.+.|||++
T Consensus 289 ~~v~cHnDl~~gNIL~~ 305 (458)
T 2qg7_A 289 PIVLCHCDLLSSNIINT 305 (458)
T ss_dssp CEEEECSCCCGGGEEEC
T ss_pred CeeEEecCCCCCcEEee
Confidence 34689999999999998
No 438
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=86.52 E-value=0.75 Score=43.46 Aligned_cols=31 Identities=19% Similarity=0.334 Sum_probs=26.8
Q ss_pred CCCeeeccccCCceeeCCCCceEecccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKF 283 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 283 (427)
...++|+|+.+.||+++.+ .++++||..+..
T Consensus 226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~ 256 (397)
T 2olc_A 226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFY 256 (397)
T ss_dssp CCEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred CCceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence 5789999999999999876 489999987764
No 439
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=86.47 E-value=0.28 Score=45.52 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=28.1
Q ss_pred CCCeeeccccCCceeeCCCCceEecccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKF 283 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 283 (427)
...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 45799999999999999888899999987754
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=85.39 E-value=0.34 Score=45.39 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=25.0
Q ss_pred CCCeeeccccCCceeeCCCCceEeccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 282 (427)
...++|+|+++.|||++.+. +.++||..|.
T Consensus 211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp CEEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred CeEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 45789999999999998655 8999998775
No 441
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=84.20 E-value=0.51 Score=45.32 Aligned_cols=31 Identities=29% Similarity=0.356 Sum_probs=24.8
Q ss_pred CCCeeeccccCCceeeCCC----------------------------CceEeccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGE----------------------------LTAHVGDFGLAK 282 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~----------------------------~~~kL~DFG~a~ 282 (427)
...++|+|+.+.|||++.+ ..+.++||..|.
T Consensus 248 ~~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~ 306 (429)
T 1nw1_A 248 PVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYAS 306 (429)
T ss_dssp CEEEECSCCCGGGEEEEC------------------------------CCEECCCTTCE
T ss_pred CeEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCC
Confidence 3568999999999999875 678899998775
No 442
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=84.15 E-value=0.89 Score=40.97 Aligned_cols=29 Identities=34% Similarity=0.282 Sum_probs=24.8
Q ss_pred CCCeeeccccCCceeeCCCCceEeccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 282 (427)
...++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 187 ~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 187 PPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp CCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred CCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 5689999999999999884 5889999 654
No 443
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=78.59 E-value=0.92 Score=42.69 Aligned_cols=31 Identities=26% Similarity=0.349 Sum_probs=26.8
Q ss_pred CCCeeeccccCCceeeCCC----CceEeccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGE----LTAHVGDFGLAK 282 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~----~~~kL~DFG~a~ 282 (427)
...++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 219 ~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 219 PVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp CEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred CcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 4568999999999999876 789999998775
No 444
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.28 E-value=2.7 Score=35.80 Aligned_cols=86 Identities=13% Similarity=0.167 Sum_probs=62.4
Q ss_pred hccCHHHHHHHHHHHHHHHHHHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcCCCccccccccccCCCCc
Q 042634 226 KNLNLLQRLSIAVDVASALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSEV 305 (427)
Q Consensus 226 ~~l~~~~~~~~~~~i~~~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~y~aPE~~~~~~~ 305 (427)
+.++...+++++.+|+...++++ . =+|--+.|+|++++.++.+++.-.|+-..+ +|. .+
T Consensus 76 k~~~~~eKlr~l~ni~~l~~~~~---~--r~tf~L~P~NL~f~~~~~p~i~~RGik~~l-----------~P~-----~~ 134 (215)
T 4ann_A 76 KSFTKNEKLRYLLNIKNLEEVNR---T--RYTFVLAPDELFFTRDGLPIAKTRGLQNVV-----------DPL-----PV 134 (215)
T ss_dssp GGSCHHHHHHHHHHGGGGGGGGG---S--SEECCCSGGGEEECTTSCEEESCCEETTTB-----------SCC-----CC
T ss_pred HhcCHHHHHHHHHHHHHHHHHhc---C--ceEEEEecceEEEcCCCCEEEEEccCccCC-----------CCC-----CC
Confidence 44778899999999998776666 2 368889999999999999999988875433 121 11
Q ss_pred CccccchhHHHHHHHHHhCCCCCCccc
Q 042634 306 STSGDVYSFGILLLETFTGKRPTNEMF 332 (427)
Q Consensus 306 ~~~~DiwS~G~vl~ell~g~~pf~~~~ 332 (427)
+...=.-.+=|++..+++++..|+...
T Consensus 135 ~ee~fL~qyKAliiall~~K~~Fe~l~ 161 (215)
T 4ann_A 135 SEAEFLTRYKALVICAFNEKQSFDALV 161 (215)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 222223366788888999998887543
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=77.63 E-value=1.4 Score=41.74 Aligned_cols=31 Identities=23% Similarity=0.240 Sum_probs=26.8
Q ss_pred CCCeeeccccCCceeeCCC------CceEeccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGE------LTAHVGDFGLAK 282 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~------~~~kL~DFG~a~ 282 (427)
...++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 4568999999999999876 789999998774
No 446
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=70.89 E-value=4.3 Score=34.72 Aligned_cols=83 Identities=16% Similarity=0.193 Sum_probs=59.5
Q ss_pred hccCHHHHHHHHHHHHHHHH-HHhhcCCCCeeeccccCCceeeCCCCceEecccccccccCCcCCCccccccccccCCCC
Q 042634 226 KNLNLLQRLSIAVDVASALD-YLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAKFLPEATNNFFNFQIAEYGMGSE 304 (427)
Q Consensus 226 ~~l~~~~~~~~~~~i~~~L~-~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~y~aPE~~~~~~ 304 (427)
+.++...+++++.+|+.-.. +++ .-+|--+.|+||+++.++.+++.-.|+-..+ +|.-
T Consensus 80 ~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~~~p~i~hRGi~~~l-----------pP~e----- 138 (219)
T 4ano_A 80 RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRALEPFFLHVGVKESL-----------PPDE----- 138 (219)
T ss_dssp HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTTCCEEESCCEETTTB-----------SSCS-----
T ss_pred HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCCCcEEEEEcCCcccC-----------CCCC-----
Confidence 44788899999999888766 555 3478889999999999999999998875433 2211
Q ss_pred cCccccc-hhHHHHHHHHHhCCCCCCc
Q 042634 305 VSTSGDV-YSFGILLLETFTGKRPTNE 330 (427)
Q Consensus 305 ~~~~~Di-wS~G~vl~ell~g~~pf~~ 330 (427)
.+. -|. -.+=|++..++.++..|+.
T Consensus 139 ~~e-e~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 139 WDD-ERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp CCH-HHHHHHHHHHHHHHTTCSSCHHH
T ss_pred CCH-HHHHHHHHHHHHHHHcCCCCHHH
Confidence 111 233 3667777888888877654
No 447
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=68.70 E-value=2.1 Score=40.85 Aligned_cols=31 Identities=19% Similarity=0.315 Sum_probs=26.6
Q ss_pred CCCeeeccccCCceeeCCCCceEecccccccc
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFGLAKF 283 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 283 (427)
...++|+|+.+.||+ +.++.+.++||..|..
T Consensus 261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp CEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 356899999999999 7788999999987753
No 448
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=67.89 E-value=2.1 Score=39.03 Aligned_cols=27 Identities=19% Similarity=0.175 Sum_probs=23.8
Q ss_pred CCCeeeccccCCceeeCCCCceEecccc
Q 042634 252 ETPIVHCDLKPSNVLLDGELTAHVGDFG 279 (427)
Q Consensus 252 ~~~ivHrDlkp~NIll~~~~~~kL~DFG 279 (427)
...++|+|+.+.|++++.++ +-|.||.
T Consensus 206 ~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 206 KPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp CCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred CceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 46799999999999999887 8899984
No 449
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=61.05 E-value=3.2 Score=37.06 Aligned_cols=41 Identities=32% Similarity=0.256 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHH-hhcCCCCeeeccccCCceeeCCCCceEecc
Q 042634 236 IAVDVASALDYL-HHYCETPIVHCDLKPSNVLLDGELTAHVGD 277 (427)
Q Consensus 236 ~~~~i~~~L~~L-H~~~~~~ivHrDlkp~NIll~~~~~~kL~D 277 (427)
.+..++..+..+ .......++|+|+.+.||+++.++. .+.|
T Consensus 170 ~~e~l~~~L~~~~~~~~~p~LvHGDlw~gNvl~~~~g~-~~iD 211 (288)
T 3f7w_A 170 LVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDDGA-VVID 211 (288)
T ss_dssp HHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEETTEE-EECS
T ss_pred HHHHHHHHHHHhcccCCCCeeeecCCCCCcEEEcCCCe-EEEe
Confidence 334444444432 2112457999999999999998874 4656
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=45.37 E-value=31 Score=25.13 Aligned_cols=40 Identities=23% Similarity=0.310 Sum_probs=21.3
Q ss_pred CCCCcCCCCCCeEECcCCcccccCCccccccccccceeeee
Q 042634 111 PSNFGILKNLGAIDISENKLSGQIPSSIGSCIRLEQLVMNG 151 (427)
Q Consensus 111 p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~~~~l~~l~l~~ 151 (427)
...|.+|++|+.+.+..+- +..-..+|.+|.+|+.+.+..
T Consensus 13 ~~aF~~c~~L~~i~iP~~v-~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPNI-GLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCTTTTCTTCCCEEECTTS-SCCCTTSSTTCTTCCCEEECC
T ss_pred HHHhcCCCCCcEEEcCCch-heEcHHHHhccCCccEEEEcC
Confidence 3456666666666665542 212233555666666655543
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.01 E-value=29 Score=25.25 Aligned_cols=38 Identities=16% Similarity=0.147 Sum_probs=19.0
Q ss_pred chhccccCCEeeeccccCcccCCcCccCCCCCCeEEccC
Q 042634 40 SIGNLTLLITLNFAENMLEGSIPSSLGKCQNLILLDLSN 78 (427)
Q Consensus 40 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 78 (427)
.|.+|++|+.+.+..+--+ .-..+|.+|++|+.+.+..
T Consensus 15 aF~~c~~L~~i~iP~~v~~-Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 15 LFAGNTVIREITVQPNIGL-LYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp TTTTCTTCCCEEECTTSSC-CCTTSSTTCTTCCCEEECC
T ss_pred HhcCCCCCcEEEcCCchhe-EcHHHHhccCCccEEEEcC
Confidence 4555666666655544221 2233455555555555543
No 452
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=38.31 E-value=37 Score=19.05 Aligned_cols=21 Identities=14% Similarity=0.241 Sum_probs=18.8
Q ss_pred CCHHHHHHHHHHHHHHHHhhc
Q 042634 405 MNMEEVAAQLLSFRNKLVKNI 425 (427)
Q Consensus 405 pt~~ev~~~L~~~~~~~~~~~ 425 (427)
|+.+++++-|.+|.+++..|+
T Consensus 7 p~~K~l~~cL~~IgDEld~N~ 27 (34)
T 3pk1_B 7 ASTKKLSECLKRIGDELDSNM 27 (34)
T ss_dssp CTHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHcccH
Confidence 899999999999999987774
No 453
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=23.53 E-value=53 Score=26.05 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=21.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHH
Q 042634 397 SSELPRERMNMEEVAAQLLSFRNKL 421 (427)
Q Consensus 397 l~~dP~~Rpt~~ev~~~L~~~~~~~ 421 (427)
...+|..||+++|+++.++++..++
T Consensus 138 ~~~~~~~~~~~~eil~~l~~l~~e~ 162 (164)
T 4gqc_A 138 VTDNPLNEPDYDEVVREANKIAGEL 162 (164)
T ss_dssp ECSCTTCCCCHHHHHHHHHHHHHHC
T ss_pred EeCCCCCCCCHHHHHHHHHHHhccc
Confidence 3567899999999999999987664
No 454
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=20.04 E-value=53 Score=33.27 Aligned_cols=45 Identities=22% Similarity=0.147 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHH--HHHHHhhcCCCCeeeccccCCceeeCCCCceEeccccccc
Q 042634 231 LQRLSIAVDVAS--ALDYLHHYCETPIVHCDLKPSNVLLDGELTAHVGDFGLAK 282 (427)
Q Consensus 231 ~~~~~~~~~i~~--~L~~LH~~~~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 282 (427)
..+..+++.+|. -+.|+= .- +|=.++|||++.+|.+-=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YIL---Gl----GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLL---GV----GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---TC----CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHc---cC----CCCCCcceEEeCCCCEEEEeehhhh
Confidence 345556665553 344544 22 5788999999999999999999874
Done!