BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042635
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81057|ASK14_ARATH SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1
Length = 149
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 37/147 (25%)
Query: 4 SKKISLKRADGQLFEVEEPVA-----MDFEIED----TVVPLPNVSTEPLSYIIEFCKAH 54
S KI L +DG+ FEVEE VA ++ IED T VPL NV+ + LS ++E+CK H
Sbjct: 3 SNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKH 62
Query: 55 V-------------EFSKQ-RSPK-------------QEMLDYWTETLANRIKNKSVQYV 87
V EF K+ P + +LD +T+A+RIK+K+ + +
Sbjct: 63 VVDEESDEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEI 122
Query: 88 GKFFGIENNFTPKEEVA-RTQYEWAFE 113
+ F IEN+FTP+EE A R + WAFE
Sbjct: 123 REIFNIENDFTPEEEAAVRKENAWAFE 149
>sp|Q39255|SKP1A_ARATH SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1
Length = 160
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 48/158 (30%)
Query: 4 SKKISLKRADGQLFEVEEPVAMDFE-----IEDTVV----PLPNVSTEPLSYIIEFCKAH 54
+KKI LK +DG+ FEVEE VA++ + +ED V PLPNV+++ L+ +IE+CK H
Sbjct: 3 AKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRH 62
Query: 55 VEFSKQRSPKQE--------------------------------------MLDYWTETLA 76
VE + ++ E +LD +T+A
Sbjct: 63 VEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVA 122
Query: 77 NRIKNKSVQYVGKFFGIENNFTPKEEVARTQY-EWAFE 113
+ IK K+ + + F I+N+FTP+EE + +WAFE
Sbjct: 123 DMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
>sp|Q9LSX8|ASK10_ARATH SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=1
Length = 152
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 40/150 (26%)
Query: 4 SKKISLKRADGQLFEVEEPVAMDFE---------IEDTVVPLPNVSTEPLSYIIEFC-KA 53
+KKI LK +DG FEVEE A + D +PLP V+ + L +IE+C K
Sbjct: 3 TKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKH 62
Query: 54 HVEFSKQRSPK-----------------------------QEMLDYWTETLANRIKNKSV 84
HV+ + S + + +LD +T+A+ IK+ +V
Sbjct: 63 HVDAANPCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTV 122
Query: 85 QYVGKFFGIENNFTPKEEVA-RTQYEWAFE 113
++ KFF IEN++T +EE A R + +W FE
Sbjct: 123 EHTRKFFNIENDYTHEEEEAVRRENQWGFE 152
>sp|Q9LSX9|ASK9_ARATH SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1
Length = 153
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 41/151 (27%)
Query: 4 SKKISLKRADGQLFEVEEPVAMDFEI----------EDTVVPLPNVSTEPLSYIIEFC-K 52
+KKI LK +DG FEVEE A +I D +PLPNV+ + L+ +IE+C K
Sbjct: 3 TKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNK 62
Query: 53 AHV----------------EFSKQRSPK-------------QEMLDYWTETLANRIKNKS 83
HV EF ++ + + + D +T+A IK +
Sbjct: 63 HHVDAANPCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNT 122
Query: 84 VQYVGKFFGIENNFTPKEEVA-RTQYEWAFE 113
+ + +FF IEN+ TP+EE A R + +WAFE
Sbjct: 123 PEQIREFFNIENDLTPEEEAAIRRENKWAFE 153
>sp|O49484|ASK11_ARATH SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1
Length = 152
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 44/152 (28%)
Query: 4 SKKISLKRADGQLFEVEEPVAMDFE-----IEDTVV----PLPNVSTEPLSYIIEFCKAH 54
SK I L +DGQ FEVEE VA+ + +ED V PL NV ++ L +IE+CK H
Sbjct: 3 SKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKH 62
Query: 55 VEFSKQRSPKQE--------------------------------MLDYWTETLANRIKNK 82
+ +P E +LD +T+A+ IK K
Sbjct: 63 --HVDEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGK 120
Query: 83 SVQYVGKFFGIENNFTPKEEVA-RTQYEWAFE 113
+ + + F IEN+FTP+EE A R + +WAFE
Sbjct: 121 TPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
>sp|Q9SL93|ASK3_ARATH SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1
Length = 163
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 49/158 (31%)
Query: 5 KKISLKRADGQLFEVEEPVAMDFE-----IEDTVV----PLPNVSTEPLSYIIEFCKAHV 55
K I LK +DG+ FEVEE VA++ + IED V PLPNV+ L+ +IE+CK HV
Sbjct: 6 KMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHV 65
Query: 56 EFSKQRSPKQE---------------------------------------MLDYWTETLA 76
E + + ++ +LD + +A
Sbjct: 66 EAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVA 125
Query: 77 NRIKNKSVQYVGKFFGIENNFTPKEEV-ARTQYEWAFE 113
++++ K+ + + F I+N++TP+EE R + WAFE
Sbjct: 126 DQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
>sp|O81055|ASK16_ARATH SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1
Length = 170
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 55/167 (32%)
Query: 4 SKKISLKRADGQLFEVEEPVA---------MDFEIEDTVVPLPNVSTEPLSYIIEFCKAH 54
S KI L +D + FEVEE VA +D + D +PL NV+ L+ +IE+CK H
Sbjct: 3 SNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKH 62
Query: 55 V-----------------------------------EFSKQRSPK----------QEMLD 69
V EF + K Q++L
Sbjct: 63 VLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLG 122
Query: 70 YWTETLANRIKNKSVQYVGKFFGIENNFTPKEEVA-RTQYEWAFEGL 115
+T+A+ +K+ S + V + F IEN++TP+EE A R + WAFE L
Sbjct: 123 LTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFEDL 169
>sp|Q9LNT9|ASK4_ARATH SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1
Length = 163
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 50/163 (30%)
Query: 1 MRHSKK-ISLKRADGQLFEVEEPVA---------MDFEIEDTVVPLPNVSTEPLSYIIEF 50
M +KK I LK +DG+ FE+EE VA ++ + D +PLPNV+ L+ +IE+
Sbjct: 1 MAETKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEY 60
Query: 51 CKAHVEFSKQRSPKQE---------------------------------------MLDYW 71
CK HVE + + ++ +LD
Sbjct: 61 CKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLT 120
Query: 72 TETLANRIKNKSVQYVGKFFGIENNFTPKEEV-ARTQYEWAFE 113
+ +A++++ K+ + + F I+N++TP+EE R + +WAFE
Sbjct: 121 CKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
>sp|Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1
Length = 171
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 58/171 (33%)
Query: 1 MRHSKKISLKRADGQLFEVEEPVAMDFE-----IEDTV----VPLPNVSTEPLSYIIEFC 51
M +KI+LK +DG+ FE++E VA++ + IED +PLPNV+++ LS +IE+C
Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60
Query: 52 KAHVEFSKQRSPK----------------------------------------------- 64
K HVE +++
Sbjct: 61 KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120
Query: 65 -QEMLDYWTETLANRIKNKSVQYVGKFFGIENNFTPKEEVARTQY-EWAFE 113
+ +LD +T+A+ IK K+ + + K F I+N+FTP+EE + +WAFE
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
>sp|O65674|ASK12_ARATH SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1
Length = 152
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 40/150 (26%)
Query: 4 SKKISLKRADGQLFEVEEPVAMDFE-----IEDTVV----PLPNVSTEPLSYIIEFCKA- 53
SK I L +DGQ FEVEE VA+ + +ED V PL NV ++ L +IE+CK
Sbjct: 3 SKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKY 62
Query: 54 HVEFSKQRSPK-----------------------------QEMLDYWTETLANRIKNKSV 84
HV+ + S + + + D +T+A+ IK K+
Sbjct: 63 HVDEANPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTP 122
Query: 85 QYVGKFFGIENNFTPKEEVA-RTQYEWAFE 113
+ + F IEN+FTP+EE A R + +WAFE
Sbjct: 123 EEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
>sp|Q9M1X5|ASK13_ARATH SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1
Length = 154
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 72/153 (47%), Gaps = 43/153 (28%)
Query: 4 SKKISLKRADGQLFEVEEPVAMDFE-----IEDTVV----PLPNVSTEPLSYIIEFCKAH 54
SK + L +DG+ F+VEE VA+ + IED V P+ NV+ LS +IE+CK H
Sbjct: 2 SKMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKH 61
Query: 55 V------------------EFSK---QRSPK------------QEMLDYWTETLANRIKN 81
V EF K Q S +++LD +T+A+ I
Sbjct: 62 VVSDSPTEESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITG 121
Query: 82 KSVQYVGKFFGIENNFTPKEEVA-RTQYEWAFE 113
K + GIEN+FTP+EE R + +WAFE
Sbjct: 122 KKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
>sp|Q9SL65|ASK17_ARATH SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=1 SV=1
Length = 150
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 38/147 (25%)
Query: 4 SKKISLKRADGQLFEVEEPVA---------MDFEIEDTVVPLPNVSTEPLSYIIEFCKAH 54
SKKI L +D + FE++E VA +D + D + L NV+ + L+ IIE+CK H
Sbjct: 3 SKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKKH 62
Query: 55 V--------------EFSKQRSPKQ--EMLD------------YWTETLANRIKNKSVQY 86
V EF K ++LD + +A+ +K+V
Sbjct: 63 VDDVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNE 122
Query: 87 VGKFFGIENNFTP-KEEVARTQYEWAF 112
+ + F IEN++TP +EE R + EWAF
Sbjct: 123 IRELFNIENDYTPEEEEELRKKNEWAF 149
>sp|Q9LSY1|ASK8_ARATH SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1
Length = 152
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 40/150 (26%)
Query: 4 SKKISLKRADGQLFEVEEPVA---------MDFEIEDTVVPLPNVSTEPLSYIIEFC-KA 53
+KKI LK ++G+ FE+EE A ++ E D V+ + +++E L +IE+C K
Sbjct: 3 TKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKH 62
Query: 54 HVE-----------------FSKQRSP------------KQEMLDYWTETLANRIKNKSV 84
HV+ K +S + +L +T+A+ IK +
Sbjct: 63 HVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTP 122
Query: 85 QYVGKFFGIENNFTPKEEVA-RTQYEWAFE 113
+ + +FF IEN+ TP+EE A R + +WAFE
Sbjct: 123 KQMREFFNIENDLTPEEEAAIRRENKWAFE 152
>sp|Q1PEL7|ASK15_ARATH SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2
Length = 177
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 55/166 (33%)
Query: 4 SKKISLKRADGQLFEVEEPVAMDFEI------EDTVV---PLPNVSTEPLSYIIEFCKAH 54
S KI L +DG+ F+VEE VA +I +D V+ PL NV+ LS ++E+CK H
Sbjct: 3 SNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKH 62
Query: 55 V---------EFSKQRSPKQEM---LDYW------------------------------- 71
V E K++ P E LD W
Sbjct: 63 VDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGL 122
Query: 72 -TETLANRIKNKSVQYVGKFFGIENNFT--PKEEVARTQYEWAFEG 114
+T+A+ IK+K+ + V + F IEN+FT +EE R + WAFE
Sbjct: 123 TCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFEA 168
>sp|Q9M1X4|ASK5_ARATH SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1
Length = 153
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 44/153 (28%)
Query: 4 SKKISLKRADGQLFEVEEPVA-----MDFEIEDT----VVPLPNVSTEPLSYIIEFCKAH 54
S KI LK +DG+ FE++E VA ++ +ED V+PL NV+++ L +I++C+ H
Sbjct: 2 STKIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKH 61
Query: 55 VEFSKQRSPK---------------------------QEMLDYWTETL-----ANRIKNK 82
V+ ++ K Q +LD +T+ A+ + K
Sbjct: 62 VKSKEEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGK 121
Query: 83 SVQYVGKFFGIENNFTPKEEVA--RTQYEWAFE 113
+ + F IEN+ T EEVA R + +WAF+
Sbjct: 122 TPDEIRAHFNIENDLTA-EEVAKIREENQWAFQ 153
>sp|Q8NK13|SKP1_NEUCR E3 ubiquitin ligase complex SCF subunit scon-3 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=scon-3 PE=1 SV=1
Length = 171
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 52/162 (32%)
Query: 2 RHSKKISLKRADGQLFEVEEPVA-------------MDFEIEDTVVPLPNVSTEPLSYII 48
R +K+SL+ DGQ+ V+ VA D + + +PLPNV+ L ++
Sbjct: 7 RALQKVSLQSNDGQIITVDRVVAERSLLIKNLIEDLGDEAVMNEAIPLPNVNEPVLRKVV 66
Query: 49 EFCKAHVEF----------SKQRSPK------------QEML----------------DY 70
E+C+ H + S+++S + QEML D
Sbjct: 67 EWCEHHRKDPPQTTEDENDSRKKSTEIDEWDQKFMQVDQEMLFEIILAANYMDIKPLLDV 126
Query: 71 WTETLANRIKNKSVQYVGKFFGIENNFTP-KEEVARTQYEWA 111
+T+AN IK KS + + K F I N+FTP +EE R + EWA
Sbjct: 127 GCKTVANMIKGKSPEEIRKTFNITNDFTPEEEEQIRRENEWA 168
>sp|P52285|SKP1A_DICDI SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium
discoideum GN=fpaA PE=1 SV=1
Length = 162
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 48/153 (31%)
Query: 7 ISLKRADGQLFEVEEPVAM----------DFEIEDTVVPLPNVSTEPLSYIIEFCKAH-- 54
+ L+ +D ++FE+E+ +A D D+ +PLPNV++ L ++++C+ H
Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQ 63
Query: 55 ----------------------VEFSKQRSPK-------------QEMLDYWTETLANRI 79
+F K P + +LD +T+AN I
Sbjct: 64 HPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMI 123
Query: 80 KNKSVQYVGKFFGIENNFTP-KEEVARTQYEWA 111
+ K+ + + K F I+N+FTP +EE R + EW
Sbjct: 124 RGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
>sp|Q9SY65|ASK18_ARATH SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2
Length = 158
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 45/154 (29%)
Query: 4 SKKISLKRADGQLFEVEEPVAMDFEI-----EDT----VVPLPNVSTEPLSYIIEFCKAH 54
S KI L +DG+ FE++E VA F I ED +PL NV+ + LS IIE+ K H
Sbjct: 3 SNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMH 62
Query: 55 V---EFSKQRSPKQEMLDYW--------------------------------TETLANRI 79
V + ++ LD W ++T+A+ I
Sbjct: 63 VNEPSEEDEDEEAKKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYI 122
Query: 80 KNKSVQYVGKFFGIENNFTPKEEVA-RTQYEWAF 112
K+K+ + V + F IEN+FTP+EE R + W F
Sbjct: 123 KDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156
>sp|Q557E4|SKP1B_DICDI SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium
discoideum GN=fpaB-1 PE=1 SV=1
Length = 162
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 48/153 (31%)
Query: 7 ISLKRADGQLFEVEEPVAM----------DFEIEDTVVPLPNVSTEPLSYIIEFCKAH-- 54
+ L+ +D ++FE+E+ +A D D +PLPNV++ L ++++C+ H
Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQ 63
Query: 55 ----------------------VEFSKQRSPK-------------QEMLDYWTETLANRI 79
+F K P + +LD +T+AN I
Sbjct: 64 HPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMI 123
Query: 80 KNKSVQYVGKFFGIENNFTP-KEEVARTQYEWA 111
+ K+ + + K F I+N+FTP +EE R + EW
Sbjct: 124 RGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
>sp|O81058|ASK19_ARATH SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=1 SV=1
Length = 200
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 9/62 (14%)
Query: 4 SKKISLKRADGQLFEVEEPVAMDFEI-----EDTV----VPLPNVSTEPLSYIIEFCKAH 54
SKKI L +DG+ F+VEE VA +I ED +P+PNV+ E L+ +IE+CK H
Sbjct: 3 SKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKH 62
Query: 55 VE 56
VE
Sbjct: 63 VE 64
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 65 QEMLDYWTETLANRIKNKSVQYVGKFFGIENNFTPKEEVA-RTQYEWAFE 113
Q + D ++T+A+ IK+ + + V + F IEN+FTP+EE A R + W FE
Sbjct: 141 QGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAWTFE 190
>sp|Q9LSY0|ASK7_ARATH SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1
Length = 125
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 9/60 (15%)
Query: 4 SKKISLKRADGQLFEVEEPVA---------MDFEIEDTVVPLPNVSTEPLSYIIEFCKAH 54
+KKI LK +DG++FE+EE A ++ E D V+P+ NV++E L +IE+C H
Sbjct: 3 TKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKH 62
>sp|C5FHU9|SKP1_ARTOC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
(strain ATCC MYA-4605 / CBS 113480) GN=sconC PE=3 SV=1
Length = 165
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 49/157 (31%)
Query: 4 SKKISLKRADGQLFEVEEPVA--------MDFEIEDT--VVPLPNVSTEPLSYIIEFCKA 53
+ KI+L +DG +E VA M ++ D+ +P+PNV+ L +IE+CK
Sbjct: 6 TSKITLTSSDGVEITIERQVAERSILIKNMLEDLGDSGEAIPIPNVNESVLKKVIEWCKH 65
Query: 54 H-----------VEFSKQRSP-----------KQEML----------------DYWTETL 75
H V+ ++ + QEML D +T+
Sbjct: 66 HKGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTV 125
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEE-VARTQYEWA 111
AN IK KS + + K F I+N+FTP+EE R + EWA
Sbjct: 126 ANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|Q71U00|SKP1_XENLA S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1
SV=3
Length = 163
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 52/159 (32%)
Query: 7 ISLKRADGQLFEVE--------------EPVAMDFEIEDTVVPLPNVSTEPLSYIIEFCK 52
I L+ +DG++FEV+ E + MD E +D VPLPNV+ L +I++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 53 AH------------------------VEFSKQRSPK-------------QEMLDYWTETL 75
H EF K + +LD +T+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEEV-ARTQYEWAFE 113
AN IK K+ + + K F I+N+FT +EE R + +W E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q5R512|SKP1_PONAB S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2
SV=1
Length = 163
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 52/159 (32%)
Query: 7 ISLKRADGQLFEVE--------------EPVAMDFEIEDTVVPLPNVSTEPLSYIIEFCK 52
I L+ +DG++FEV+ E + MD E +D VPLPNV+ L +I++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 53 AH------------------------VEFSKQRSPK-------------QEMLDYWTETL 75
H EF K + +LD +T+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEEV-ARTQYEWAFE 113
AN IK K+ + + K F I+N+FT +EE R + +W E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q4R5B9|SKP1_MACFA S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1
PE=2 SV=1
Length = 163
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 52/159 (32%)
Query: 7 ISLKRADGQLFEVE--------------EPVAMDFEIEDTVVPLPNVSTEPLSYIIEFCK 52
I L+ +DG++FEV+ E + MD E +D VPLPNV+ L +I++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 53 AH------------------------VEFSKQRSPK-------------QEMLDYWTETL 75
H EF K + +LD +T+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEEV-ARTQYEWAFE 113
AN IK K+ + + K F I+N+FT +EE R + +W E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1
SV=2
Length = 163
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 52/159 (32%)
Query: 7 ISLKRADGQLFEVE--------------EPVAMDFEIEDTVVPLPNVSTEPLSYIIEFCK 52
I L+ +DG++FEV+ E + MD E +D VPLPNV+ L +I++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 53 AH------------------------VEFSKQRSPK-------------QEMLDYWTETL 75
H EF K + +LD +T+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEEV-ARTQYEWAFE 113
AN IK K+ + + K F I+N+FT +EE R + +W E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q5ZKF5|SKP1_CHICK S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2
SV=1
Length = 163
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 52/159 (32%)
Query: 7 ISLKRADGQLFEVE--------------EPVAMDFEIEDTVVPLPNVSTEPLSYIIEFCK 52
I L+ +DG++FEV+ E + MD E +D VPLPNV+ L +I++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 53 AH------------------------VEFSKQRSPK-------------QEMLDYWTETL 75
H EF K + +LD +T+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEEV-ARTQYEWAFE 113
AN IK K+ + + K F I+N+FT +EE R + +W E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|P63209|SKP1_CAVPO S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2
SV=2
Length = 163
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 52/159 (32%)
Query: 7 ISLKRADGQLFEVE--------------EPVAMDFEIEDTVVPLPNVSTEPLSYIIEFCK 52
I L+ +DG++FEV+ E + MD E +D VPLPNV+ L +I++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 53 AH------------------------VEFSKQRSPK-------------QEMLDYWTETL 75
H EF K + +LD +T+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEEV-ARTQYEWAFE 113
AN IK K+ + + K F I+N+FT +EE R + +W E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q3ZCF3|SKP1_BOVIN S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1
Length = 163
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 52/159 (32%)
Query: 7 ISLKRADGQLFEVE--------------EPVAMDFEIEDTVVPLPNVSTEPLSYIIEFCK 52
I L+ +DG++FEV+ E + MD E +D VPLPNV+ L +I++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 53 AH------------------------VEFSKQRSPK-------------QEMLDYWTETL 75
H EF K + +LD +T+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEEV-ARTQYEWAFE 113
AN IK K+ + + K F I+N+FT +EE R + +W E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q6PEC4|SKP1_RAT S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1
PE=2 SV=3
Length = 163
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 52/159 (32%)
Query: 7 ISLKRADGQLFEVE--------------EPVAMDFEIEDTVVPLPNVSTEPLSYIIEFCK 52
I L+ +DG++FEV+ E + MD E +D VPLPNV+ L +I++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 53 AH------------------------VEFSKQRSPK-------------QEMLDYWTETL 75
H EF K + +LD +T+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEEV-ARTQYEWAFE 113
AN IK K+ + + K F I+N+FT +EE R + +W E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q9WTX5|SKP1_MOUSE S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1
SV=3
Length = 163
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 52/159 (32%)
Query: 7 ISLKRADGQLFEVE--------------EPVAMDFEIEDTVVPLPNVSTEPLSYIIEFCK 52
I L+ +DG++FEV+ E + MD E +D VPLPNV+ L +I++C
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 53 AH------------------------VEFSKQRSPK-------------QEMLDYWTETL 75
H EF K + +LD +T+
Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTV 123
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEEV-ARTQYEWAFE 113
AN IK K+ + + K F I+N+FT +EE R + +W E
Sbjct: 124 ANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
>sp|Q8TGW7|SKP1_ARTOT E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
GN=sconC PE=2 SV=1
Length = 165
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 49/157 (31%)
Query: 4 SKKISLKRADGQLFEVEEPVA----------MDFEIEDTVVPLPNVSTEPLSYIIEFCKA 53
+ KI+L +DG ++ VA D +P+PNV+ L +IE+CK
Sbjct: 6 TSKITLTSSDGVDITIDRQVAERSILIKNMLKDLGDSGEAIPIPNVNESVLKKVIEWCKH 65
Query: 54 H-----------VEFSKQRSP-----------KQEML----------------DYWTETL 75
H V+ ++ + QEML D +T+
Sbjct: 66 HKGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTV 125
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEE-VARTQYEWA 111
AN IK KS + + K F I+N+FTP+EE R + EWA
Sbjct: 126 ANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|D4ARL8|SKP1_ARTBC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma
benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=sconC
PE=3 SV=1
Length = 164
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 49/159 (30%)
Query: 4 SKKISLKRADGQLFEVEEPVA--------MDFEIEDTV--VPLPNVSTEPLSYIIEFCKA 53
+ KI+L +DG +E VA M ++ D+ +P+PNV+ L +IE+C+
Sbjct: 6 TNKITLTSSDGVEVTIERQVAERSILIKNMLEDLGDSGEPIPIPNVNESVLKKVIEWCEH 65
Query: 54 H-----------VEFSKQRSP-----------KQEML----------------DYWTETL 75
H V+ ++ + QEML D +T+
Sbjct: 66 HKGDPPSTGDDDVDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTV 125
Query: 76 ANRIKNKSVQYVGKFFGIENNFTPKEE-VARTQYEWAFE 113
AN IK KS + + K F I+N+FTP+EE R + EWA E
Sbjct: 126 ANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 164
>sp|A1CZG3|SKP1_NEOFI E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=sconC PE=3 SV=1
Length = 158
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 48/155 (30%)
Query: 7 ISLKRADGQLFEVEEPVAM----------DFEIEDTVVPLPNVSTEPLSYIIEFCKAHV- 55
++L +DG V+ VA D D +P+PNV+ L +IE+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHHKN 63
Query: 56 --------EFSKQRSPK------------QEML----------------DYWTETLANRI 79
+ S++++ QEML D +T+AN I
Sbjct: 64 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 123
Query: 80 KNKSVQYVGKFFGIENNFTPKEE-VARTQYEWAFE 113
K KS + + K F I+N+FTP+EE R + EWA E
Sbjct: 124 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 158
>sp|Q4WTT8|SKP1_ASPFU E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=sconC PE=3 SV=1
Length = 158
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 48/155 (30%)
Query: 7 ISLKRADGQLFEVEEPVAM----------DFEIEDTVVPLPNVSTEPLSYIIEFCKAHV- 55
++L +DG V+ VA D D +P+PNV+ L +IE+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHHKN 63
Query: 56 --------EFSKQRSPK------------QEML----------------DYWTETLANRI 79
+ S++++ QEML D +T+AN I
Sbjct: 64 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 123
Query: 80 KNKSVQYVGKFFGIENNFTPKEE-VARTQYEWAFE 113
K KS + + K F I+N+FTP+EE R + EWA E
Sbjct: 124 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 158
>sp|B0Y3B5|SKP1_ASPFC E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=sconC PE=3 SV=1
Length = 158
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 48/155 (30%)
Query: 7 ISLKRADGQLFEVEEPVAM----------DFEIEDTVVPLPNVSTEPLSYIIEFCKAHV- 55
++L +DG V+ VA D D +P+PNV+ L +IE+C H
Sbjct: 4 VTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCTHHKN 63
Query: 56 --------EFSKQRSPK------------QEML----------------DYWTETLANRI 79
+ S++++ QEML D +T+AN I
Sbjct: 64 DPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVANMI 123
Query: 80 KNKSVQYVGKFFGIENNFTPKEE-VARTQYEWAFE 113
K KS + + K F I+N+FTP+EE R + EWA E
Sbjct: 124 KGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 158
>sp|B6QGB9|SKP1_PENMQ E3 ubiquitin ligase complex SCF subunit sconC OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=sconC PE=3 SV=1
Length = 160
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 48/156 (30%)
Query: 4 SKKISLKRADGQLFEVEEPVAM----------DFEIEDTVVPLPNVSTEPLSYIIEFCKA 53
S +++L+ +D VE VA D + VP+PNV+ L +IE+C
Sbjct: 2 SGQVTLQSSDSVDITVERAVAERSMLIKNLLEDLGESEEPVPIPNVNESVLKKVIEWCTH 61
Query: 54 HV---------EFSKQRSPK------------QEML----------------DYWTETLA 76
H + +++R+ + QEML D +T+A
Sbjct: 62 HKNDPQSTGEDDDNRRRTTEIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVA 121
Query: 77 NRIKNKSVQYVGKFFGIENNFTPKEE-VARTQYEWA 111
N IK KS + + K F I+N+FTP+EE R + EWA
Sbjct: 122 NMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|Q5BAX8|SKP1_EMENI E3 ubiquitin ligase complex SCF subunit sconC OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=sconC PE=3 SV=2
Length = 161
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 38/116 (32%)
Query: 34 VPLPNVSTEPLSYIIEFCKAH-------------------VEFSKQR--SPKQEML---- 68
+P+PNVS LS ++E+C H +E Q+ QEML
Sbjct: 43 IPIPNVSENVLSKVLEWCAHHRNDPPSSADDDDSRRKTTDIEEWDQKFMQVDQEMLFEII 102
Query: 69 ------------DYWTETLANRIKNKSVQYVGKFFGIENNFTPKEE-VARTQYEWA 111
D +T+AN IK KS + + K F I+N+FTP+EE R + EWA
Sbjct: 103 LAANYLDIKPLLDIGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|B8MDP8|SKP1_TALSN E3 ubiquitin ligase complex SCF subunit sconC OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=sconC PE=3 SV=1
Length = 160
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 38/116 (32%)
Query: 34 VPLPNVSTEPLSYIIEFCKAHV---------EFSKQRSPK------------QEML---- 68
VP+PNV+ L +IE+C H + +++R+ + QEML
Sbjct: 42 VPIPNVNESVLKKVIEWCTHHKNDPQTTGEEDDNRRRTTEIDEWDQKFMQVDQEMLFEII 101
Query: 69 ------------DYWTETLANRIKNKSVQYVGKFFGIENNFTPKEE-VARTQYEWA 111
D +T+AN IK KS + + K F I+N+FTP+EE R + EWA
Sbjct: 102 LAANYLDIKALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|A1C9U5|SKP1_ASPCL E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=sconC PE=3 SV=1
Length = 159
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 48/158 (30%)
Query: 4 SKKISLKRADGQLFEVEEPVA-----MDFEIEDT-----VVPLPNVSTEPLSYIIEFCKA 53
S ++L +DG V+ VA + +ED +P+PNV+ L +IE+C
Sbjct: 2 STTVTLTSSDGVDLTVDRDVAERSVLIKNMLEDLGESGEAIPIPNVNEVVLKKVIEWCTH 61
Query: 54 HV---------EFSKQRSPK------------QEML----------------DYWTETLA 76
H + S++++ QEML D +T+A
Sbjct: 62 HKNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEIILAANYLDIKALLDVGCKTVA 121
Query: 77 NRIKNKSVQYVGKFFGIENNFTPKEE-VARTQYEWAFE 113
N IK KS + + K F I+N+FTP+EE R + EWA E
Sbjct: 122 NMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 159
>sp|Q0CA59|SKP1_ASPTN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=sconC PE=3
SV=1
Length = 161
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 38/119 (31%)
Query: 33 VVPLPNVSTEPLSYIIEFCKAHV---------EFSKQRSPK------------QEML--- 68
+P+PNV+ L +IE+C H + S++++ QEML
Sbjct: 43 AIPIPNVNEAVLKKVIEWCTHHKNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEI 102
Query: 69 -------------DYWTETLANRIKNKSVQYVGKFFGIENNFTPKEE-VARTQYEWAFE 113
D +T+AN IK KS + + K F I+N+FTP+EE R + EWA E
Sbjct: 103 ILAANYLDIKGLLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWAEE 161
>sp|Q5KU00|SKP1_ASPOR E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=sconC PE=3 SV=1
Length = 161
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 38/116 (32%)
Query: 34 VPLPNVSTEPLSYIIEFCKAHV---------EFSKQRSPK------------QEML---- 68
+P+PNV+ L +IE+C H + S++++ QEML
Sbjct: 43 IPIPNVNEAVLKKVIEWCTHHKNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEII 102
Query: 69 ------------DYWTETLANRIKNKSVQYVGKFFGIENNFTPKEE-VARTQYEWA 111
D +T+AN IK KS + + K F I+N+FTP+EE R + EWA
Sbjct: 103 LAANYLDIKGLLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|B8NSJ0|SKP1_ASPFN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=sconC PE=3 SV=1
Length = 161
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 38/116 (32%)
Query: 34 VPLPNVSTEPLSYIIEFCKAHV---------EFSKQRSPK------------QEML---- 68
+P+PNV+ L +IE+C H + S++++ QEML
Sbjct: 43 IPIPNVNEAVLKKVIEWCTHHKNDPPSTGDDDDSRRKTTDIDEWDQKFMQVDQEMLFEII 102
Query: 69 ------------DYWTETLANRIKNKSVQYVGKFFGIENNFTPKEE-VARTQYEWA 111
D +T+AN IK KS + + K F I+N+FTP+EE R + EWA
Sbjct: 103 LAANYLDIKGLLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|Q9Y709|SKP1_SCHPO Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=skp1 PE=1 SV=1
Length = 161
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 50/156 (32%)
Query: 6 KISLKRADGQLFEVEEPVA-----MDFEIEDTV-----VPLPNVSTEPLSYIIEFCKAHV 55
KI L +D + F V++ +A + +ED +PLPNVS+ L ++E+C+ H
Sbjct: 3 KIKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHHK 62
Query: 56 --------EFSKQRSPK---------------QEML----------------DYWTETLA 76
E S R K QEML D +T+A
Sbjct: 63 NDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVA 122
Query: 77 NRIKNKSVQYVGKFFGIENNFTP-KEEVARTQYEWA 111
N I+ KS + + K F I N+FTP +EE R + EWA
Sbjct: 123 NMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
>sp|P52286|SKP1_YEAST Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SKP1 PE=1 SV=2
Length = 194
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 37/116 (31%)
Query: 33 VVPLPNVSTEPLSYIIEFCKAHVEF---------SKQRSP-----------KQEML---- 68
V+P+PNV + L +IE+ + H + S++ +P QEML
Sbjct: 76 VMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEII 135
Query: 69 ------------DYWTETLANRIKNKSVQYVGKFFGIENNFTPKEEVA-RTQYEWA 111
D + +A I+ +S + + + F I N+FTP+EE A R + EWA
Sbjct: 136 LAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
>sp|Q1PEF6|ASK6_ARATH SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1
Length = 85
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 31 DTVVPLPNVSTEPLSYIIEFCKAHVEFSKQRSPKQ 65
D +PLPNV+++ L +IE+CK HV SK+ K+
Sbjct: 13 DNGIPLPNVTSKILLLVIEYCKKHVVESKEEDLKK 47
>sp|A4XL67|TRUB_CALS8 tRNA pseudouridine synthase B OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=truB
PE=3 SV=1
Length = 287
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 7 ISLKRADGQLFEVEEPVAMDFEIEDTVVPLPNV 39
+ L+RA +F+++ ++DF ED+++PL N+
Sbjct: 187 VQLRRAKNGVFDIKAAFSLDFISEDSIIPLENL 219
>sp|Q9XJP3|TSPE_BPSFV Bifunctional tail protein OS=Enterobacteria phage Sf6 PE=1 SV=2
Length = 623
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 68 LDYWTETLANRIKNKSVQYVGKFFGIENNFTPKEEVARTQYEWAFEGL 115
L Y ++T+ ++N V GI+ N T ++ V R Y W F+ +
Sbjct: 243 LSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDSVIRQVYGWVFDNV 290
>sp|Q4WZ44|NRPS7_ASPFU Nonribosomal peptide synthetase 7 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=NRPS7
PE=3 SV=1
Length = 2353
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 61 RSPKQEMLDYWTETLAN 77
R+PKQ LDYWT L N
Sbjct: 2109 RTPKQPQLDYWTRLLQN 2125
>sp|Q811M1|RHG15_MOUSE Rho GTPase-activating protein 15 OS=Mus musculus GN=Arhgap15 PE=2
SV=1
Length = 481
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 36 LPNVSTEPLSYIIEFCKAHVEFSKQRSPKQEMLDYWT 72
LPN+ T ++ C AH+E++K++S ++ + T
Sbjct: 133 LPNMKTRHNVESVDLCGAHIEWAKEKSSRKSVFQITT 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,979,240
Number of Sequences: 539616
Number of extensions: 1852734
Number of successful extensions: 4684
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4558
Number of HSP's gapped (non-prelim): 101
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)