BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>042638
GHCPGWQAVPVHDPQVQDAANHAIQTIQQRSNSLFPYVLQEIVHAKAEVIEDFAKFAMLL
KVKRGEKEEKLNVEVHKKEGTFHLNQMQQDQE

High Scoring Gene Products

Symbol, full name Information P value
CYSB
AT3G12490 		protein from Arabidopsis thaliana 9.7e-25
AT5G05110 protein from Arabidopsis thaliana 1.4e-16

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  042638
        (92 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2092492 - symbol:CYSB "cystatin B" species:370...   282  9.7e-25   1
TAIR|locus:2175294 - symbol:AT5G05110 species:3702 "Arabi...   205  1.4e-16   1


>TAIR|locus:2092492 [details] [associations]
            symbol:CYSB "cystatin B" species:3702 "Arabidopsis
            thaliana" [GO:0004869 "cysteine-type endopeptidase inhibitor
            activity" evidence=IEA;ISS;IDA] [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0006972 "hyperosmotic response" evidence=IMP]
            [GO:0006979 "response to oxidative stress" evidence=IMP]
            [GO:0009409 "response to cold" evidence=IMP] [GO:0009414 "response
            to water deprivation" evidence=IMP] [GO:0050897 "cobalt ion
            binding" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            InterPro:IPR000010 InterPro:IPR027214 Pfam:PF00031 SMART:SM00043
            GO:GO:0005783 GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0005576 GO:GO:0006952 GO:GO:0004869 GO:GO:0050897
            EMBL:AP002047 EMBL:AC069474 InterPro:IPR018073 PROSITE:PS00287
            GO:GO:0009628 PANTHER:PTHR11413 InterPro:IPR020381 ProDom:PD001231
            HSSP:P09229 MEROPS:I25.014 EMBL:AY085950 EMBL:AY065127
            EMBL:BT001195 EMBL:AF315737 IPI:IPI00521110 IPI:IPI00657156
            RefSeq:NP_566425.1 RefSeq:NP_850570.2 UniGene:At.16910
            UniGene:At.48650 ProteinModelPortal:Q8H0X6 SMR:Q8H0X6 STRING:Q8H0X6
            PaxDb:Q8H0X6 PRIDE:Q8H0X6 ProMEX:Q8H0X6 EnsemblPlants:AT3G12490.2
            GeneID:820428 KEGG:ath:AT3G12490 TAIR:At3g12490 eggNOG:NOG312503
            HOGENOM:HOG000006085 InParanoid:Q8H0X6 OMA:HESGWRE PhylomeDB:Q8H0X6
            ProtClustDB:CLSN2914970 Genevestigator:Q8H0X6 Uniprot:Q8H0X6
        Length = 234

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 56/92 (60%), Positives = 67/92 (72%)

Query:     2 HCPGWQAVPVHDPQVQDAANHAIQTIQQRSNSLFPYVLQEIVHAKAEVIEDFAKFAMLLK 61
             H  GW+ VP  DP+V+  A  A++TIQQRSNSLFPY L E+VHAKAEV  + AK+ MLLK
Sbjct:   143 HESGWREVPGDDPEVKHVAEQAVKTIQQRSNSLFPYELLEVVHAKAEVTGEAAKYNMLLK 202

Query:    62 VKRGEKEEKLNVEVHKK-EGTFHLNQMQQDQE 92
             +KRGEKEEK  VEVHK  EG  HLN  +Q  +
Sbjct:   203 LKRGEKEEKFKVEVHKNHEGALHLNHAEQHHD 234


>TAIR|locus:2175294 [details] [associations]
            symbol:AT5G05110 species:3702 "Arabidopsis thaliana"
            [GO:0004869 "cysteine-type endopeptidase inhibitor activity"
            evidence=IEA;ISS] [GO:0005576 "extracellular region" evidence=ISM]
            InterPro:IPR000010 InterPro:IPR027214 Pfam:PF00031 SMART:SM00043
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0006952
            GO:GO:0004869 EMBL:AB005245 InterPro:IPR018073 PROSITE:PS00287
            PANTHER:PTHR11413 InterPro:IPR020381 ProDom:PD001231 HSSP:P09229
            MEROPS:I25.014 HOGENOM:HOG000006085 EMBL:AF370168 EMBL:AY059130
            EMBL:AY086750 IPI:IPI00547968 RefSeq:NP_196130.1 UniGene:At.19811
            ProteinModelPortal:Q8LC76 SMR:Q8LC76 PRIDE:Q8LC76
            EnsemblPlants:AT5G05110.1 GeneID:830393 KEGG:ath:AT5G05110
            TAIR:At5g05110 eggNOG:NOG307767 InParanoid:Q8LC76 OMA:FVICSEE
            PhylomeDB:Q8LC76 ProtClustDB:CLSN2916274 Genevestigator:Q8LC76
            Uniprot:Q8LC76
        Length = 232

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 38/74 (51%), Positives = 59/74 (79%)

Query:     6 WQAVPVHDPQVQDAANHAIQTIQQRSNSLFPYVLQEIVHAKAEVIEDFAKFAMLLKVKRG 65
             W++V  ++P+VQ+AA HA++++QQ+SNSLFPY L +I+ A+A+V+E+  KF +LLK++RG
Sbjct:   154 WRSVSTNNPEVQEAAKHAMKSLQQKSNSLFPYKLIDIILARAKVVEERVKFELLLKLERG 213

Query:    66 EKEEKLNVEVHKKE 79
              K EK  VEV K +
Sbjct:   214 NKLEKFMVEVMKDQ 227


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.131   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       92        92   0.00091  102 3  11 22  0.36    30
                                                     29  0.40    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  537 (57 KB)
  Total size of DFA:  108 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  11.48u 0.08s 11.56t   Elapsed:  00:00:04
  Total cpu time:  11.48u 0.08s 11.56t   Elapsed:  00:00:05
  Start:  Fri May 10 18:01:49 2013   End:  Fri May 10 18:01:54 2013

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