Query 042644
Match_columns 205
No_of_seqs 238 out of 1743
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 14:13:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042644.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042644hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 5.8E-47 2E-51 309.2 20.1 188 2-192 4-197 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 2.3E-32 8E-37 246.8 15.3 147 44-194 296-446 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 3E-31 1E-35 241.1 18.5 147 44-194 331-481 (496)
4 3qac_A 11S globulin SEED stora 100.0 1.5E-31 5E-36 241.6 14.6 149 43-195 295-447 (465)
5 2e9q_A 11S globulin subunit be 100.0 1E-30 3.5E-35 236.5 15.2 149 43-195 294-446 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 3.5E-30 1.2E-34 234.4 14.8 149 43-195 366-518 (531)
7 1uij_A Beta subunit of beta co 100.0 6.5E-30 2.2E-34 229.1 16.3 157 33-194 212-386 (416)
8 2cav_A Protein (canavalin); vi 100.0 4.8E-30 1.6E-34 231.6 15.5 159 32-195 243-416 (445)
9 3s7i_A Allergen ARA H 1, clone 100.0 4.9E-30 1.7E-34 229.7 13.1 157 34-195 226-412 (418)
10 2ea7_A 7S globulin-1; beta bar 100.0 2E-29 6.7E-34 227.0 15.6 159 31-194 227-402 (434)
11 3c3v_A Arachin ARAH3 isoform; 100.0 1.2E-28 4E-33 225.0 17.3 148 43-194 344-495 (510)
12 1dgw_A Canavalin; duplicated s 100.0 9.8E-29 3.4E-33 198.0 14.7 157 36-199 4-175 (178)
13 1fxz_A Glycinin G1; proglycini 100.0 1.6E-28 5.5E-33 223.1 17.5 148 43-194 310-461 (476)
14 2d5f_A Glycinin A3B4 subunit; 100.0 1.2E-28 4.1E-33 224.7 14.4 149 43-196 339-489 (493)
15 2e9q_A 11S globulin subunit be 100.0 5.5E-28 1.9E-32 218.7 14.2 146 52-201 45-245 (459)
16 3qac_A 11S globulin SEED stora 99.9 9.9E-28 3.4E-32 216.6 14.0 146 52-201 32-247 (465)
17 3ksc_A LEGA class, prolegumin; 99.9 4.3E-27 1.5E-31 213.9 14.6 147 52-202 28-229 (496)
18 1fxz_A Glycinin G1; proglycini 99.9 2.9E-27 1E-31 214.8 13.5 145 52-200 30-238 (476)
19 2phl_A Phaseolin; plant SEED s 99.9 2.3E-26 8E-31 204.7 14.5 136 48-194 223-374 (397)
20 2d5f_A Glycinin A3B4 subunit; 99.9 3.8E-26 1.3E-30 208.3 14.8 145 52-200 27-239 (493)
21 3fz3_A Prunin; TREE NUT allerg 99.9 3.8E-26 1.3E-30 208.0 13.9 147 52-202 30-308 (531)
22 3kgl_A Cruciferin; 11S SEED gl 99.9 5.1E-26 1.7E-30 205.5 14.2 146 52-201 25-255 (466)
23 3c3v_A Arachin ARAH3 isoform; 99.9 5.3E-26 1.8E-30 207.5 14.2 146 52-201 30-281 (510)
24 2cav_A Protein (canavalin); vi 99.9 2E-25 7E-30 201.4 17.7 161 34-199 47-220 (445)
25 2phl_A Phaseolin; plant SEED s 99.9 1.8E-25 6.2E-30 199.0 14.8 146 48-198 27-192 (397)
26 2ea7_A 7S globulin-1; beta bar 99.9 3.1E-25 1.1E-29 199.7 16.0 138 52-193 39-190 (434)
27 1uij_A Beta subunit of beta co 99.9 2.6E-25 8.8E-30 199.3 14.4 144 52-199 27-188 (416)
28 2vqa_A SLL1358 protein, MNCA; 99.9 4.6E-24 1.6E-28 186.7 17.7 159 28-192 194-352 (361)
29 3s7i_A Allergen ARA H 1, clone 99.9 1.9E-24 6.7E-29 193.4 15.2 135 52-192 22-171 (418)
30 2vqa_A SLL1358 protein, MNCA; 99.9 3.7E-21 1.3E-25 168.2 17.0 150 35-191 20-172 (361)
31 1j58_A YVRK protein; cupin, de 99.8 1E-18 3.5E-23 154.1 18.4 153 33-192 223-375 (385)
32 1j58_A YVRK protein; cupin, de 99.8 3.2E-19 1.1E-23 157.3 11.6 147 36-190 48-196 (385)
33 1dgw_X Canavalin; duplicated s 99.8 1.5E-19 5.3E-24 126.4 5.1 75 37-113 3-78 (79)
34 3h8u_A Uncharacterized conserv 99.6 2.4E-14 8.1E-19 106.6 10.7 83 70-156 38-120 (125)
35 2xlg_A SLL1785 protein, CUCA; 99.5 1.8E-14 6.1E-19 120.2 8.2 116 29-149 5-137 (239)
36 3l2h_A Putative sugar phosphat 99.5 1.7E-13 5.9E-18 106.7 12.5 81 69-154 44-126 (162)
37 1v70_A Probable antibiotics sy 99.5 2.6E-13 8.9E-18 96.6 11.5 79 68-151 25-103 (105)
38 2fqp_A Hypothetical protein BP 99.5 1.8E-13 6.3E-18 98.0 9.7 77 69-148 16-92 (97)
39 1x82_A Glucose-6-phosphate iso 99.5 1.4E-12 4.7E-17 104.9 14.5 83 69-151 65-155 (190)
40 1lr5_A Auxin binding protein 1 99.5 8E-13 2.7E-17 103.1 12.7 85 70-155 40-129 (163)
41 3ibm_A Cupin 2, conserved barr 99.5 2.4E-12 8.4E-17 101.4 15.5 117 29-152 12-132 (167)
42 3i7d_A Sugar phosphate isomera 99.4 8.1E-13 2.8E-17 103.7 12.0 84 67-155 39-125 (163)
43 2gu9_A Tetracenomycin polyketi 99.4 1E-12 3.6E-17 95.0 11.6 79 68-151 18-98 (113)
44 2oa2_A BH2720 protein; 1017534 99.4 1E-12 3.5E-17 101.1 12.2 84 69-152 41-125 (148)
45 3lag_A Uncharacterized protein 99.4 9.6E-14 3.3E-18 100.4 5.1 80 67-148 13-92 (98)
46 3ht1_A REMF protein; cupin fol 99.4 1.1E-12 3.8E-17 99.4 10.2 85 68-156 36-120 (145)
47 1o4t_A Putative oxalate decarb 99.4 2.1E-12 7.3E-17 97.7 10.9 77 68-149 54-130 (133)
48 4e2g_A Cupin 2 conserved barre 99.4 1.9E-12 6.6E-17 96.1 10.5 77 69-152 39-115 (126)
49 3kgz_A Cupin 2 conserved barre 99.4 2.7E-12 9.2E-17 100.3 11.4 79 69-153 42-120 (156)
50 3es1_A Cupin 2, conserved barr 99.4 1.3E-12 4.4E-17 103.8 9.6 80 69-154 77-156 (172)
51 3jzv_A Uncharacterized protein 99.4 1.1E-11 3.9E-16 97.7 15.0 78 69-152 51-128 (166)
52 3fjs_A Uncharacterized protein 99.4 3E-12 1E-16 94.5 9.8 76 68-149 33-108 (114)
53 2bnm_A Epoxidase; oxidoreducta 99.4 9.1E-12 3.1E-16 99.6 13.0 83 65-149 111-197 (198)
54 2f4p_A Hypothetical protein TM 99.4 1.1E-11 3.9E-16 95.4 13.0 78 68-151 45-123 (147)
55 2b8m_A Hypothetical protein MJ 99.4 5.9E-12 2E-16 92.5 10.8 74 70-149 26-100 (117)
56 4i4a_A Similar to unknown prot 99.4 9.6E-12 3.3E-16 92.5 12.0 75 69-149 32-106 (128)
57 2pfw_A Cupin 2, conserved barr 99.4 8.4E-12 2.9E-16 91.2 11.2 76 70-153 33-108 (116)
58 3cew_A Uncharacterized cupin p 99.3 4.3E-12 1.5E-16 94.4 9.4 79 68-151 23-102 (125)
59 2ozi_A Hypothetical protein RP 99.3 1.5E-12 5.1E-17 94.2 6.3 79 68-148 14-92 (98)
60 1vj2_A Novel manganese-contain 99.3 5.5E-12 1.9E-16 94.3 9.4 77 68-150 45-121 (126)
61 2o8q_A Hypothetical protein; c 99.3 9.6E-12 3.3E-16 93.5 10.5 78 71-154 43-121 (134)
62 1rc6_A Hypothetical protein YL 99.3 1E-11 3.6E-16 104.0 10.2 78 68-150 176-254 (261)
63 2vpv_A Protein MIF2, MIF2P; nu 99.3 1.8E-11 6.3E-16 96.6 10.3 75 70-149 87-162 (166)
64 1yhf_A Hypothetical protein SP 99.3 4.7E-11 1.6E-15 87.0 11.7 73 69-149 38-110 (115)
65 1y9q_A Transcriptional regulat 99.3 2.7E-11 9.3E-16 96.5 10.8 78 67-151 100-179 (192)
66 2d40_A Z3393, putative gentisa 99.2 8E-11 2.7E-15 103.2 13.0 89 52-150 250-339 (354)
67 2q30_A Uncharacterized protein 99.2 5.2E-11 1.8E-15 85.8 9.8 77 68-150 30-107 (110)
68 3h7j_A Bacilysin biosynthesis 99.2 5E-11 1.7E-15 98.9 10.7 79 70-154 144-223 (243)
69 1sef_A Conserved hypothetical 99.2 1.8E-10 6.2E-15 97.2 13.7 76 69-150 180-257 (274)
70 1y3t_A Hypothetical protein YX 99.2 9.3E-11 3.2E-15 100.7 11.8 79 69-153 44-122 (337)
71 1dgw_Y Canavalin; duplicated s 99.2 1.6E-10 5.6E-15 82.6 11.1 78 113-194 4-85 (93)
72 2ozj_A Cupin 2, conserved barr 99.2 2.8E-10 9.5E-15 83.1 11.7 72 70-149 37-108 (114)
73 3lwc_A Uncharacterized protein 99.2 1.8E-10 6E-15 86.0 10.6 74 69-150 38-111 (119)
74 2d40_A Z3393, putative gentisa 99.2 5.2E-11 1.8E-15 104.4 9.0 78 69-151 98-175 (354)
75 1juh_A Quercetin 2,3-dioxygena 99.2 2.6E-10 9E-15 99.6 12.1 82 70-153 47-131 (350)
76 1sfn_A Conserved hypothetical 99.2 6E-10 2.1E-14 92.7 13.7 78 68-151 162-240 (246)
77 1y3t_A Hypothetical protein YX 99.1 6.5E-10 2.2E-14 95.3 13.6 76 73-154 219-295 (337)
78 3h7j_A Bacilysin biosynthesis 99.1 2.9E-10 9.9E-15 94.3 9.8 74 71-150 34-108 (243)
79 2i45_A Hypothetical protein; n 99.1 2.8E-10 9.5E-15 82.2 8.4 67 73-147 30-97 (107)
80 1sq4_A GLXB, glyoxylate-induce 99.1 2.9E-10 9.8E-15 96.5 9.8 77 68-150 65-143 (278)
81 3d82_A Cupin 2, conserved barr 99.1 2E-10 6.9E-15 81.5 7.3 70 67-147 29-98 (102)
82 1rc6_A Hypothetical protein YL 99.1 4.3E-10 1.5E-14 94.2 10.3 78 69-151 57-135 (261)
83 3bu7_A Gentisate 1,2-dioxygena 99.1 1.2E-09 4.3E-14 96.8 13.6 92 52-150 276-368 (394)
84 3nw4_A Gentisate 1,2-dioxygena 99.1 2.7E-10 9.2E-15 100.2 9.2 79 68-151 100-178 (368)
85 4h7l_A Uncharacterized protein 99.1 5.8E-10 2E-14 87.1 9.8 72 70-152 46-119 (157)
86 3bu7_A Gentisate 1,2-dioxygena 99.1 5.8E-10 2E-14 99.0 11.1 79 68-151 120-199 (394)
87 2pyt_A Ethanolamine utilizatio 99.1 5.1E-10 1.7E-14 85.1 9.2 72 70-151 56-127 (133)
88 1sq4_A GLXB, glyoxylate-induce 99.1 9.5E-10 3.2E-14 93.3 11.6 83 64-152 184-267 (278)
89 2opk_A Hypothetical protein; p 99.1 8.7E-10 3E-14 81.0 9.8 77 68-150 28-109 (112)
90 4e2q_A Ureidoglycine aminohydr 99.1 3.1E-09 1.1E-13 89.7 13.8 77 68-150 183-260 (266)
91 3rns_A Cupin 2 conserved barre 99.0 1.1E-09 3.7E-14 90.0 10.7 73 70-149 152-224 (227)
92 4axo_A EUTQ, ethanolamine util 99.0 3.3E-09 1.1E-13 82.4 12.5 72 70-151 65-136 (151)
93 1sef_A Conserved hypothetical 99.0 9.5E-10 3.3E-14 92.8 9.5 78 68-150 59-137 (274)
94 1vr3_A Acireductone dioxygenas 99.0 5.6E-09 1.9E-13 84.0 12.7 83 72-156 75-167 (191)
95 4e2q_A Ureidoglycine aminohydr 99.0 1E-09 3.5E-14 92.7 8.3 88 52-150 55-142 (266)
96 4b29_A Dimethylsulfoniopropion 99.0 3E-09 1E-13 86.9 10.4 78 67-150 128-205 (217)
97 3rns_A Cupin 2 conserved barre 98.9 7E-09 2.4E-13 85.1 10.8 73 70-150 36-108 (227)
98 1o5u_A Novel thermotoga mariti 98.8 1.5E-08 5.3E-13 73.3 8.5 63 75-144 35-97 (101)
99 1zrr_A E-2/E-2' protein; nicke 98.8 3.1E-09 1.1E-13 84.8 4.1 70 84-156 93-162 (179)
100 1sfn_A Conserved hypothetical 98.8 3.8E-08 1.3E-12 81.7 10.2 72 69-150 48-119 (246)
101 2y0o_A Probable D-lyxose ketol 98.7 8.2E-08 2.8E-12 76.2 10.9 79 70-152 52-154 (175)
102 2q1z_B Anti-sigma factor CHRR, 98.7 7.7E-08 2.6E-12 77.5 10.4 71 70-150 124-194 (195)
103 3bcw_A Uncharacterized protein 98.7 4.1E-08 1.4E-12 73.6 7.8 67 70-142 48-114 (123)
104 3eqe_A Putative cystein deoxyg 98.7 4.4E-07 1.5E-11 71.8 13.1 85 70-154 68-156 (171)
105 1juh_A Quercetin 2,3-dioxygena 98.7 1.3E-07 4.4E-12 82.5 10.8 77 67-150 245-325 (350)
106 3nw4_A Gentisate 1,2-dioxygena 98.7 3E-07 1E-11 80.8 12.8 89 52-150 260-350 (368)
107 3ebr_A Uncharacterized RMLC-li 98.6 1.1E-07 3.8E-12 74.3 8.6 74 70-151 41-116 (159)
108 2o1q_A Putative acetyl/propion 98.6 4.4E-08 1.5E-12 75.2 5.0 77 70-153 43-121 (145)
109 3st7_A Capsular polysaccharide 98.6 2.1E-07 7.2E-12 80.4 9.9 77 72-150 273-354 (369)
110 1yfu_A 3-hydroxyanthranilate-3 98.6 5.5E-07 1.9E-11 71.0 10.6 68 69-139 34-101 (174)
111 2gm6_A Cysteine dioxygenase ty 98.5 1.7E-06 5.7E-11 70.4 12.7 82 70-152 78-168 (208)
112 3cjx_A Protein of unknown func 98.5 4.5E-07 1.5E-11 71.3 8.6 74 70-150 42-117 (165)
113 3d0j_A Uncharacterized protein 98.5 3.7E-07 1.3E-11 69.5 7.1 68 80-149 38-108 (140)
114 2arc_A ARAC, arabinose operon 98.4 2.7E-06 9.3E-11 64.6 11.0 58 85-148 32-90 (164)
115 3eln_A Cysteine dioxygenase ty 98.3 1.3E-05 4.3E-10 64.8 13.7 86 70-155 69-163 (200)
116 1zvf_A 3-hydroxyanthranilate 3 98.3 5.3E-06 1.8E-10 65.3 10.1 59 78-138 41-103 (176)
117 3o14_A Anti-ecfsigma factor, C 98.2 5.2E-06 1.8E-10 68.2 8.8 83 52-150 28-110 (223)
118 2qnk_A 3-hydroxyanthranilate 3 98.2 1.1E-05 3.8E-10 68.0 10.2 59 79-139 39-97 (286)
119 2pa7_A DTDP-6-deoxy-3,4-keto-h 98.1 5E-05 1.7E-09 58.1 12.3 94 52-149 17-112 (141)
120 3ejk_A DTDP sugar isomerase; Y 98.1 6.5E-05 2.2E-09 59.4 12.5 98 52-150 35-141 (174)
121 1yud_A Hypothetical protein SO 98.0 0.00025 8.7E-09 55.7 14.1 131 49-189 27-165 (170)
122 3bal_A Acetylacetone-cleaving 98.0 1.1E-05 3.8E-10 62.5 6.2 88 52-150 32-120 (153)
123 3uss_A Putative uncharacterize 97.9 0.00026 8.8E-09 57.6 13.6 83 70-153 72-163 (211)
124 3myx_A Uncharacterized protein 97.8 0.00017 5.9E-09 59.7 10.9 73 69-150 45-117 (238)
125 3es4_A Uncharacterized protein 97.8 0.00015 5E-09 53.6 9.3 63 70-138 41-103 (116)
126 3gbg_A TCP pilus virulence reg 97.6 0.00033 1.1E-08 57.8 9.8 73 70-146 6-82 (276)
127 3myx_A Uncharacterized protein 97.5 0.00063 2.1E-08 56.3 10.4 63 70-138 166-228 (238)
128 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 97.3 0.0026 8.7E-08 50.6 11.3 70 79-149 56-135 (185)
129 2ixk_A DTDP-4-dehydrorhamnose 97.3 0.0032 1.1E-07 50.0 11.1 71 79-150 57-137 (184)
130 3ryk_A DTDP-4-dehydrorhamnose 97.2 0.0026 8.8E-08 51.4 9.8 68 79-147 78-156 (205)
131 2vec_A YHAK, pirin-like protei 97.2 0.0019 6.7E-08 53.8 9.4 72 73-148 66-140 (256)
132 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 97.2 0.0024 8E-08 51.3 9.5 70 79-150 68-143 (197)
133 3o14_A Anti-ecfsigma factor, C 97.2 0.0014 4.8E-08 53.6 8.2 65 71-147 146-210 (223)
134 3bb6_A Uncharacterized protein 97.2 0.0024 8.1E-08 47.8 8.6 65 80-145 23-94 (127)
135 1wlt_A 176AA long hypothetical 97.1 0.0056 1.9E-07 49.1 10.7 68 79-147 73-151 (196)
136 1dzr_A DTDP-4-dehydrorhamnose 97.0 0.0076 2.6E-07 47.8 11.2 69 79-148 55-134 (183)
137 3kmh_A D-lyxose isomerase; cup 97.0 0.0089 3.1E-07 49.1 11.6 76 70-145 105-203 (246)
138 2c0z_A NOVW; isomerase, epimer 97.0 0.0088 3E-07 48.6 11.1 68 79-147 63-141 (216)
139 1oi6_A PCZA361.16; epimerase, 97.0 0.0093 3.2E-07 48.1 11.1 70 79-149 55-135 (205)
140 1upi_A DTDP-4-dehydrorhamnose 96.9 0.013 4.4E-07 48.0 11.6 68 79-147 74-152 (225)
141 1vrb_A Putative asparaginyl hy 96.9 0.0069 2.4E-07 52.4 10.2 70 76-146 145-249 (342)
142 4hn1_A Putative 3-epimerase in 96.8 0.0082 2.8E-07 48.3 9.8 69 79-148 52-131 (201)
143 1tq5_A Protein YHHW; bicupin, 96.8 0.0071 2.4E-07 50.0 9.5 73 72-148 42-117 (242)
144 4gjz_A Lysine-specific demethy 96.5 0.015 5.3E-07 46.2 9.4 65 75-140 127-226 (235)
145 3d8c_A Hypoxia-inducible facto 96.4 0.013 4.5E-07 50.7 9.1 72 76-148 187-295 (349)
146 2qdr_A Uncharacterized protein 96.0 0.026 9E-07 47.0 8.4 72 68-149 88-160 (303)
147 2qjv_A Uncharacterized IOLB-li 96.0 0.051 1.8E-06 45.5 10.3 81 69-151 151-247 (270)
148 2xdv_A MYC-induced nuclear ant 95.8 0.034 1.2E-06 49.7 8.7 63 76-139 143-223 (442)
149 3loi_A Putative uncharacterize 95.7 0.57 1.9E-05 36.6 15.1 128 52-190 28-169 (172)
150 2yu1_A JMJC domain-containing 95.5 0.044 1.5E-06 49.2 8.4 76 78-153 203-304 (451)
151 3kv5_D JMJC domain-containing 95.5 0.037 1.3E-06 50.1 7.9 62 79-140 274-361 (488)
152 3k2o_A Bifunctional arginine d 95.4 0.058 2E-06 46.5 8.6 65 76-140 176-281 (336)
153 3al5_A HTYW5, JMJC domain-cont 95.4 0.044 1.5E-06 47.1 7.7 70 75-147 170-270 (338)
154 3kv4_A PHD finger protein 8; e 95.2 0.08 2.7E-06 47.4 8.8 64 78-141 238-327 (447)
155 2p17_A Pirin-like protein; GK1 95.1 0.11 3.8E-06 43.5 9.2 67 77-147 45-113 (277)
156 3k3o_A PHF8, PHD finger protei 95.1 0.063 2.1E-06 47.0 7.8 63 78-140 154-242 (371)
157 4diq_A Lysine-specific demethy 95.0 0.17 5.9E-06 45.7 10.7 67 75-142 167-255 (489)
158 1e5r_A Proline oxidase; oxidor 95.0 0.034 1.1E-06 47.1 5.7 74 70-147 90-173 (290)
159 2qnk_A 3-hydroxyanthranilate 3 94.8 0.11 3.8E-06 43.6 8.2 53 78-138 214-267 (286)
160 3kv9_A JMJC domain-containing 94.8 0.09 3.1E-06 46.4 7.9 62 79-140 183-270 (397)
161 3m3i_A Putative uncharacterize 94.7 1.2 4.2E-05 36.1 13.9 134 49-191 34-212 (225)
162 3pua_A GRC5, PHD finger protei 94.5 0.11 3.7E-06 45.8 7.9 63 78-140 181-269 (392)
163 1eyb_A Homogentisate 1,2-dioxy 94.5 0.099 3.4E-06 46.9 7.6 56 85-147 171-226 (471)
164 1j1l_A Pirin; beta sandwich, c 94.1 0.28 9.6E-06 41.4 9.4 73 72-148 41-116 (290)
165 1ywk_A 4-deoxy-L-threo-5-hexos 93.9 0.36 1.2E-05 40.7 9.4 77 70-149 179-262 (289)
166 2oyz_A UPF0345 protein VPA0057 93.8 0.31 1.1E-05 34.3 7.6 68 72-147 24-91 (94)
167 3rcq_A Aspartyl/asparaginyl be 93.7 0.45 1.5E-05 37.9 9.3 77 72-154 103-184 (197)
168 3pur_A Lysine-specific demethy 93.2 0.18 6.3E-06 45.9 7.0 62 78-139 303-390 (528)
169 3hqx_A UPF0345 protein aciad03 92.6 0.48 1.6E-05 34.3 7.1 69 75-149 41-109 (111)
170 2rg4_A Uncharacterized protein 92.2 0.49 1.7E-05 37.9 7.7 78 73-150 105-204 (216)
171 1znp_A Hypothetical protein AT 92.1 3.1 0.00011 31.8 12.4 89 49-139 20-115 (154)
172 1xru_A 4-deoxy-L-threo-5-hexos 91.8 0.78 2.7E-05 38.5 8.5 77 70-149 179-262 (282)
173 1xe7_A YML079WP, hypothetical 91.5 3.3 0.00011 33.1 11.6 109 71-189 79-198 (203)
174 1qwr_A Mannose-6-phosphate iso 91.5 1.2 4.2E-05 37.8 9.8 57 70-134 250-306 (319)
175 1pmi_A PMI, phosphomannose iso 91.5 0.81 2.8E-05 40.8 8.9 77 70-149 356-437 (440)
176 3eo6_A Protein of unknown func 91.2 0.92 3.2E-05 32.5 7.3 57 75-137 40-96 (106)
177 1j1l_A Pirin; beta sandwich, c 91.0 2.8 9.5E-05 35.2 11.3 101 68-178 166-268 (290)
178 3dl3_A Tellurite resistance pr 90.7 1.1 3.9E-05 32.7 7.5 62 81-145 26-92 (119)
179 3dv8_A Transcriptional regulat 90.0 0.8 2.7E-05 35.3 6.7 125 74-201 27-202 (220)
180 2wfp_A Mannose-6-phosphate iso 90.0 0.82 2.8E-05 40.1 7.4 57 70-134 323-379 (394)
181 2p17_A Pirin-like protein; GK1 89.3 1.5 5.1E-05 36.5 8.2 73 68-149 164-241 (277)
182 1tq5_A Protein YHHW; bicupin, 89.1 1.6 5.4E-05 35.7 8.1 69 69-148 158-226 (242)
183 2vec_A YHAK, pirin-like protei 86.9 4.2 0.00014 33.5 9.4 72 69-147 180-251 (256)
184 1zx5_A Mannosephosphate isomer 86.9 3.4 0.00012 34.7 9.0 56 70-135 229-285 (300)
185 2ypd_A Probable JMJC domain-co 85.6 0.89 3E-05 39.8 4.7 28 115-142 293-320 (392)
186 2pqq_A Putative transcriptiona 83.9 2.8 9.6E-05 29.7 6.3 53 74-127 29-82 (149)
187 2qjv_A Uncharacterized IOLB-li 83.5 15 0.00051 30.5 11.2 70 71-147 29-107 (270)
188 3dn7_A Cyclic nucleotide bindi 82.3 4.9 0.00017 30.1 7.3 52 74-126 31-83 (194)
189 3mdp_A Cyclic nucleotide-bindi 82.0 2.9 0.0001 29.4 5.7 53 73-126 29-85 (142)
190 3gyd_A CNMP-BD protein, cyclic 81.9 6.3 0.00021 29.7 7.9 52 73-125 62-114 (187)
191 2oz6_A Virulence factor regula 81.5 5.5 0.00019 30.0 7.4 124 75-201 15-197 (207)
192 3idb_B CAMP-dependent protein 81.3 6.1 0.00021 28.6 7.4 51 73-125 61-112 (161)
193 4ev0_A Transcription regulator 80.9 5.2 0.00018 30.4 7.1 126 74-202 23-197 (216)
194 3fx3_A Cyclic nucleotide-bindi 80.6 5.5 0.00019 30.8 7.3 119 74-196 35-206 (237)
195 1zx5_A Mannosephosphate isomer 80.5 1.2 4.2E-05 37.5 3.5 44 93-136 118-179 (300)
196 3ryp_A Catabolite gene activat 80.1 6.6 0.00023 29.6 7.5 125 75-202 21-201 (210)
197 1qwr_A Mannose-6-phosphate iso 78.9 1.5 5E-05 37.3 3.5 43 92-136 117-179 (319)
198 3d0s_A Transcriptional regulat 78.9 7.4 0.00025 29.8 7.5 123 75-201 31-210 (227)
199 3iwz_A CAP-like, catabolite ac 78.8 6.7 0.00023 30.1 7.2 126 74-202 35-221 (230)
200 3e97_A Transcriptional regulat 78.4 6.2 0.00021 30.4 6.9 128 73-202 29-209 (231)
201 1ft9_A Carbon monoxide oxidati 78.0 19 0.00065 27.4 9.7 123 73-201 23-196 (222)
202 3b02_A Transcriptional regulat 77.8 6.3 0.00021 29.6 6.7 121 77-201 3-172 (195)
203 2z69_A DNR protein; beta barre 76.9 2.6 8.8E-05 30.1 4.0 52 73-125 35-87 (154)
204 3kcc_A Catabolite gene activat 76.4 9.1 0.00031 30.4 7.6 125 74-201 70-250 (260)
205 1zyb_A Transcription regulator 76.4 5.7 0.00019 30.9 6.2 126 73-201 43-219 (232)
206 3la7_A Global nitrogen regulat 76.2 8.2 0.00028 30.2 7.1 127 71-201 41-226 (243)
207 2fmy_A COOA, carbon monoxide o 76.1 23 0.00079 26.8 10.0 120 74-200 28-199 (220)
208 1o5l_A Transcriptional regulat 75.8 6 0.0002 30.3 6.1 126 73-201 22-197 (213)
209 2xxz_A Lysine-specific demethy 75.1 2.8 9.5E-05 36.0 4.2 29 115-143 279-307 (332)
210 3e6c_C CPRK, cyclic nucleotide 75.0 9 0.00031 30.0 7.1 125 73-201 32-210 (250)
211 2zcw_A TTHA1359, transcription 74.5 8.1 0.00028 29.1 6.5 121 76-201 8-179 (202)
212 2gau_A Transcriptional regulat 74.4 5.7 0.00019 30.6 5.7 125 73-201 33-213 (232)
213 2wfp_A Mannose-6-phosphate iso 73.6 2.8 9.6E-05 36.7 4.0 23 114-136 239-261 (394)
214 2bgc_A PRFA; bacterial infecti 72.8 10 0.00035 29.5 6.8 124 75-201 20-203 (238)
215 2ptm_A Hyperpolarization-activ 71.9 9.5 0.00032 28.7 6.3 49 73-125 94-142 (198)
216 4ava_A Lysine acetyltransferas 71.1 11 0.00036 31.0 6.9 51 74-125 37-87 (333)
217 2qcs_B CAMP-dependent protein 70.2 18 0.00061 28.8 7.9 52 73-125 180-233 (291)
218 3bpz_A Potassium/sodium hyperp 67.1 11 0.00038 28.5 5.8 48 73-125 95-142 (202)
219 1xsq_A Ureidoglycolate hydrola 66.4 12 0.00043 28.7 5.8 66 83-148 68-139 (168)
220 1pmi_A PMI, phosphomannose iso 62.5 6.4 0.00022 34.9 4.0 22 115-136 266-287 (440)
221 2bdr_A Ureidoglycolate hydrola 62.4 17 0.00059 28.1 6.0 77 71-147 56-140 (175)
222 4ask_A Lysine-specific demethy 61.9 7.2 0.00025 35.3 4.2 27 115-141 313-339 (510)
223 1ywk_A 4-deoxy-L-threo-5-hexos 61.5 67 0.0023 26.8 9.8 65 76-145 62-129 (289)
224 2d93_A RAP guanine nucleotide 61.3 10 0.00034 26.5 4.2 47 74-125 40-87 (134)
225 4f8a_A Potassium voltage-gated 61.0 28 0.00095 24.6 6.8 49 74-127 51-99 (160)
226 3avr_A Lysine-specific demethy 60.5 13 0.00044 33.9 5.6 31 115-145 338-368 (531)
227 3g7d_A PHPD; non heme Fe(II) d 59.2 41 0.0014 29.0 8.1 45 96-143 358-402 (443)
228 3pna_A CAMP-dependent protein 58.7 32 0.0011 24.4 6.8 48 73-125 61-108 (154)
229 1o7f_A CAMP-dependent RAP1 gua 58.6 20 0.00068 30.8 6.5 54 73-127 65-121 (469)
230 3ocp_A PRKG1 protein; serine/t 57.2 38 0.0013 23.4 6.8 47 74-125 47-93 (139)
231 3tnp_B CAMP-dependent protein 57.1 35 0.0012 29.3 7.8 52 73-126 168-220 (416)
232 3shr_A CGMP-dependent protein 55.7 24 0.00083 28.2 6.1 51 74-125 181-233 (299)
233 3g7d_A PHPD; non heme Fe(II) d 55.1 36 0.0012 29.4 7.1 77 116-192 156-267 (443)
234 3dkw_A DNR protein; CRP-FNR, H 50.9 5 0.00017 30.7 1.1 52 73-125 32-84 (227)
235 1vp6_A CNBD, cyclic-nucleotide 50.0 16 0.00054 25.3 3.7 45 74-125 35-79 (138)
236 1tc3_C Protein (TC3 transposas 48.9 20 0.00067 20.0 3.4 28 168-195 21-48 (51)
237 1xn7_A Hypothetical protein YH 45.0 9.7 0.00033 25.4 1.7 33 168-200 16-48 (78)
238 2qdr_A Uncharacterized protein 44.7 53 0.0018 27.3 6.3 65 70-152 216-288 (303)
239 1xru_A 4-deoxy-L-threo-5-hexos 43.9 47 0.0016 27.6 6.1 50 91-145 77-129 (282)
240 3of1_A CAMP-dependent protein 43.6 39 0.0013 25.7 5.3 48 74-125 149-196 (246)
241 3ukn_A Novel protein similar t 42.4 52 0.0018 24.7 5.8 50 73-127 98-147 (212)
242 2qcs_B CAMP-dependent protein 41.2 68 0.0023 25.2 6.6 49 73-126 62-110 (291)
243 2k02_A Ferrous iron transport 40.9 10 0.00035 25.9 1.3 33 168-200 16-48 (87)
244 3of1_A CAMP-dependent protein 37.5 45 0.0015 25.3 4.8 48 74-126 31-78 (246)
245 1pcq_O Groes protein; chaperon 36.2 84 0.0029 21.7 5.5 48 80-130 22-70 (97)
246 1s4c_A Protein HI0227; double- 35.9 59 0.002 24.0 5.1 53 84-136 60-133 (155)
247 3tnp_B CAMP-dependent protein 34.3 63 0.0021 27.7 5.7 52 73-125 290-348 (416)
248 1wgp_A Probable cyclic nucleot 34.2 6.6 0.00022 27.4 -0.6 48 76-125 32-82 (137)
249 3shr_A CGMP-dependent protein 32.5 1E+02 0.0035 24.3 6.4 49 73-126 62-110 (299)
250 4din_B CAMP-dependent protein 29.9 48 0.0016 28.0 4.1 48 77-125 275-324 (381)
251 1o7f_A CAMP-dependent RAP1 gua 29.8 1.2E+02 0.004 25.9 6.7 46 76-125 364-409 (469)
252 2heo_A Z-DNA binding protein 1 27.3 24 0.00081 22.3 1.3 32 168-199 25-56 (67)
253 1yll_A PA5104, conserved hypot 26.7 1.4E+02 0.0048 23.3 6.0 34 93-130 141-174 (200)
254 2v79_A DNA replication protein 24.5 32 0.0011 25.1 1.7 34 168-201 51-84 (135)
255 3ryp_A Catabolite gene activat 23.7 33 0.0011 25.5 1.7 11 168-178 178-188 (210)
256 3dkq_A PKHD-type hydroxylase S 23.3 90 0.0031 25.1 4.4 23 116-138 159-181 (243)
257 3iwz_A CAP-like, catabolite ac 23.0 35 0.0012 25.8 1.7 9 168-176 198-206 (230)
258 1jko_C HIN recombinase, DNA-in 23.0 83 0.0028 17.4 3.2 25 168-192 21-45 (52)
259 3e97_A Transcriptional regulat 22.9 37 0.0013 25.8 1.9 11 168-178 186-196 (231)
260 2gau_A Transcriptional regulat 22.8 41 0.0014 25.6 2.1 11 168-178 191-201 (232)
261 1iyc_A Scarabaecin; antifungal 22.7 11 0.00037 20.8 -0.9 11 19-29 23-33 (36)
262 2jt1_A PEFI protein; solution 22.7 33 0.0011 22.7 1.3 32 169-200 25-56 (77)
263 3p42_A Predicted protein; beta 22.6 85 0.0029 25.1 4.1 14 117-130 190-203 (236)
264 2oz6_A Virulence factor regula 22.2 36 0.0012 25.2 1.7 11 168-178 175-185 (207)
265 3d0s_A Transcriptional regulat 21.4 41 0.0014 25.5 1.8 11 168-178 188-198 (227)
266 4f7z_A RAP guanine nucleotide 21.3 1.3E+02 0.0043 28.9 5.7 33 91-126 378-410 (999)
267 2zcw_A TTHA1359, transcription 21.2 40 0.0014 25.1 1.7 11 168-178 157-167 (202)
268 4ev0_A Transcription regulator 21.1 39 0.0013 25.2 1.7 6 170-175 176-181 (216)
269 3dxt_A JMJC domain-containing 21.0 1.6E+02 0.0054 25.3 5.6 32 115-146 262-293 (354)
270 1ufm_A COP9 complex subunit 4; 20.4 34 0.0012 23.0 1.0 29 168-196 30-58 (84)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=5.8e-47 Score=309.22 Aligned_cols=188 Identities=36% Similarity=0.574 Sum_probs=176.3
Q ss_pred CCCcceeccCCCCCceeeeCCcCCCCCCCCCCCCceeec-ccCCCCC-CCCCCeeEEEeccCCCCCCCccceEEEEEEEc
Q 042644 2 DNLQDICPTDTTKKQTIFINGLPCKSPDRIFASDFKSTK-LRDAGDT-DKFPYSSLTLVTAADFPGLNTLGLSVARTDLD 79 (205)
Q Consensus 2 ~~~~d~cv~~~~~~~~~~~~g~~ck~~~~~~~~df~~~~-~~~~~~~-~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~ 79 (205)
||||||||||++++. +++|||||| |+.++++||+|++ ++.++++ |+. |+.++.++..++|++++.++++.++++.
T Consensus 4 ~~~~d~c~~~~~~~~-~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~-G~~v~~~~~~~~p~l~~~~~~~~~~~l~ 80 (201)
T 1fi2_A 4 DPLQDFCVADLDGKA-VSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPN-GSAVTELDVAEWPGTNTLGVSMNRVDFA 80 (201)
T ss_dssp CCSSSCCCBCCCTTS-CCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTT-SEEEEEESTTTCGGGTTSSCEEEEEEEC
T ss_pred cccceeEEecCCCCc-ccccCcccc-cCcccccceEEeeeecCCCCccCCC-CcEEEEEecccCCCcccCceEEEEEEEC
Confidence 799999999998753 789999999 9999999999999 9899987 888 9999999999999999999999999999
Q ss_pred CCcccCCccCCCCCeEEEEEecEEEEEEEeCC---CeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCce
Q 042644 80 VDGMVVPHTHPRASEMLFVFKGVVIAGFVDTN---RQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGV 156 (205)
Q Consensus 80 pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~---~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~ 156 (205)
||+..++|||+++.|++||++|++++++.+++ ++.+.+.|++||++++|+|.+|+++|.|++++++++++++++|+.
T Consensus 81 pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~~ 160 (201)
T 1fi2_A 81 PGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGI 160 (201)
T ss_dssp TTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCCC
T ss_pred CCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCCe
Confidence 99999999999999999999999999998764 677789999999999999999999999999999999999999999
Q ss_pred eeccccccC-CCCCCHHHHHhhcCCCHHHHHHhhhcC
Q 042644 157 VSISDAAFS-DFDTIDDLVRKFIPFLCWTIRVSEMSH 192 (205)
Q Consensus 157 ~~~~~~~f~-~~~~~~evLa~af~v~~~~v~~l~~~~ 192 (205)
+.++.++|+ +|.+++++|+++|+++++++++|+++.
T Consensus 161 ~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 197 (201)
T 1fi2_A 161 VFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKF 197 (201)
T ss_dssp EEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHS
T ss_pred EehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhh
Confidence 999999998 556999999999999999999999865
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.98 E-value=2.3e-32 Score=246.85 Aligned_cols=147 Identities=17% Similarity=0.244 Sum_probs=136.7
Q ss_pred CCCC-CCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC-eEEEEEEcC
Q 042644 44 AGDT-DKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR-QVFQVMLKA 121 (205)
Q Consensus 44 ~~~~-~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~l~~ 121 (205)
..++ ++. ||+++.+++.+||+|++++|++++++|.||++++|||||+|+||+||++|+++++++++++ +++..+|++
T Consensus 296 ~~d~~~~~-gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~ 374 (466)
T 3kgl_A 296 NADVYKPQ-LGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQ 374 (466)
T ss_dssp GEEEEETT-TEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred cCCcccCC-CceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecC
Confidence 3444 677 9999999999999999999999999999999999999999999999999999999999864 678999999
Q ss_pred CCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCceeecc--ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCC
Q 042644 122 GEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSIS--DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQ 194 (205)
Q Consensus 122 GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~ 194 (205)
|||++||+|++|++ |.|++++++++++++++|+...++ .++|+ .+|++||+++|+++.+++++|++++.+
T Consensus 375 GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~--~lP~eVla~aF~v~~~~v~~Lk~~q~e 446 (466)
T 3kgl_A 375 GQLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLR--GLPLEVISNGYQISLEEARRVKFNTIE 446 (466)
T ss_dssp TCEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGG--GSCHHHHHHHHTCCHHHHHHHHHSCCC
T ss_pred CcEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhh--hCCHHHHHHHhCcCHHHHHHHHhccCc
Confidence 99999999999998 789999999999999999999887 57888 799999999999999999999998755
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.97 E-value=3e-31 Score=241.15 Aligned_cols=147 Identities=20% Similarity=0.251 Sum_probs=135.2
Q ss_pred CCCC-CCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCC-CeEEEEEEcC
Q 042644 44 AGDT-DKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTN-RQVFQVMLKA 121 (205)
Q Consensus 44 ~~~~-~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~-~~~~~~~l~~ 121 (205)
..++ ++. ||+++.+++.+||+|+++||++++++|.||++++|||||+|+||+||++|++++++++++ ++++..+|++
T Consensus 331 ~~di~~~~-gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~ 409 (496)
T 3ksc_A 331 SPDIYNPE-AGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEA 409 (496)
T ss_dssp CCSEEETT-TEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEET
T ss_pred cCCcccCC-CeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecC
Confidence 3454 777 999999999999999999999999999999999999999999999999999999999986 4677889999
Q ss_pred CCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCceeecc--ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCC
Q 042644 122 GEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSIS--DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQ 194 (205)
Q Consensus 122 GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~ 194 (205)
|||++||+|++|++.|. ++++.+++++++++|+...++ .++|+ .+|++||+++|+++.+++++|++++.+
T Consensus 410 GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~--~~p~eVLa~aF~v~~~~v~~Lk~~q~e 481 (496)
T 3ksc_A 410 GRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVIN--NLPLDVVAATFNLQRNEARQLKSNNPF 481 (496)
T ss_dssp TCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTT--TSCHHHHHHHHTCCHHHHHHHHHSCCC
T ss_pred CeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhh--hCCHHHHHHHHCcCHHHHHHHHhcCCc
Confidence 99999999999998764 788999999999999999887 57887 799999999999999999999997655
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.97 E-value=1.5e-31 Score=241.61 Aligned_cols=149 Identities=20% Similarity=0.195 Sum_probs=137.7
Q ss_pred CCCCC-CCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCC-CeEEEEEEc
Q 042644 43 DAGDT-DKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTN-RQVFQVMLK 120 (205)
Q Consensus 43 ~~~~~-~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~-~~~~~~~l~ 120 (205)
...++ ++. ||+++.+++.+||+|+++||++++++|.||++++|||||+|+||+||++|++++++++++ ++++..+|+
T Consensus 295 ~~~dv~~~~-gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~ 373 (465)
T 3qac_A 295 SKADVYTPE-AGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELS 373 (465)
T ss_dssp TTCSEEETT-TEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred ccCCcccCC-CceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEec
Confidence 44555 778 999999999999999999999999999999999999999999999999999999999986 468889999
Q ss_pred CCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCceeecc--ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCCc
Q 042644 121 AGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSIS--DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQD 195 (205)
Q Consensus 121 ~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~~ 195 (205)
+|||++||+|++|++. .|++++.+++++++++|+...++ .++|+ .+|++||+++|+++.+++++|++++.+.
T Consensus 374 ~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~--~ip~eVla~aF~v~~e~v~~Lk~~~~e~ 447 (465)
T 3qac_A 374 RGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIR--SLPIDVVSNIYQISREEAFGLKFNRPET 447 (465)
T ss_dssp TTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHH--HSCHHHHHHHHTCCHHHHHHHHHSCCSC
T ss_pred CCeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhh--hCCHHHHHHHhCCCHHHHHHHHhccCcc
Confidence 9999999999999985 67889999999999999999987 67887 7999999999999999999999987654
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.97 E-value=1e-30 Score=236.53 Aligned_cols=149 Identities=13% Similarity=0.133 Sum_probs=137.4
Q ss_pred CCCCC-CCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC-eEEEEEEc
Q 042644 43 DAGDT-DKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR-QVFQVMLK 120 (205)
Q Consensus 43 ~~~~~-~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~l~ 120 (205)
..+++ ++. ||+++.+++.+||+|+++++++++++|.||++.+|||||+|+||+||++|+++++++++++ +++..+|+
T Consensus 294 ~~~~~~~~~-gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~ 372 (459)
T 2e9q_A 294 ERADVFNPR-GGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVR 372 (459)
T ss_dssp SCCSEEETT-TEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred ccCCcccCC-CeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEe
Confidence 44555 777 9999999999999999999999999999999999999999999999999999999998764 56778899
Q ss_pred CCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCceeecc--ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCCc
Q 042644 121 AGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSIS--DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQD 195 (205)
Q Consensus 121 ~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~~ 195 (205)
+||+++||+|++|++.| |++++.+++++++++|+...++ .++|+ .+|++||+++|+++++++++|++...+.
T Consensus 373 ~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~--~~p~~Vla~af~v~~~~v~~l~~~~~e~ 446 (459)
T 2e9q_A 373 EGQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMR--MLPLGVLSNMYRISREEAQRLKYGQQEM 446 (459)
T ss_dssp TTCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHH--HSCHHHHHHHHTCCHHHHHHHHHSCCSC
T ss_pred CCcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHH--hCCHHHHHHHHCcCHHHHHHHHhcCCcc
Confidence 99999999999999999 7889999999999999999998 78888 7899999999999999999999887543
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.97 E-value=3.5e-30 Score=234.41 Aligned_cols=149 Identities=15% Similarity=0.216 Sum_probs=133.5
Q ss_pred CCCCC-CCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC-eEEEEEEc
Q 042644 43 DAGDT-DKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR-QVFQVMLK 120 (205)
Q Consensus 43 ~~~~~-~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~l~ 120 (205)
...++ |+. ||+++.+++.+||+|++++|++++++|.||++++|||||+|+||+||++|+++++++++++ +++..+|+
T Consensus 366 s~~d~~n~~-GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~ 444 (531)
T 3fz3_A 366 ERADIFSPR-AGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQ 444 (531)
T ss_dssp GGCSEEETT-TEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred ccCCcccCC-CeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEec
Confidence 34555 888 9999999999999999999999999999999999999999999999999999999999864 67899999
Q ss_pred CCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCceeecc--ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCCc
Q 042644 121 AGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSIS--DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQD 195 (205)
Q Consensus 121 ~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~~ 195 (205)
+||+++||+|++|+.. .+++.+.++++.++.+|+...++ .++|+ .+|++||+++|+++.+++++|+++..+.
T Consensus 445 ~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~--~lP~eVLa~aF~v~~e~v~kLk~~~~es 518 (531)
T 3fz3_A 445 QGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLR--ALPDEVLANAYQISREQARQLKYNRQET 518 (531)
T ss_dssp TTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHH--HSCHHHHHHHHTCCHHHHHHHHHSCCCS
T ss_pred CCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHH--hCCHHHHHHHhCcCHHHHHHHHhcCCCc
Confidence 9999999999999875 56777777755566899998887 68888 6999999999999999999999987664
No 7
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.97 E-value=6.5e-30 Score=229.14 Aligned_cols=157 Identities=13% Similarity=0.117 Sum_probs=139.6
Q ss_pred CCCceeecccCCCCCCCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC
Q 042644 33 ASDFKSTKLRDAGDTDKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR 112 (205)
Q Consensus 33 ~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~ 112 (205)
...+.|+.+..++..+.. +|+++.+++.+||+|+++++++++++|.||++.+|||||+++|++||++|+++++++++++
T Consensus 212 ~~~~~~~l~~~~p~~~~~-~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g 290 (416)
T 1uij_A 212 SEDEPFNLRSRNPIYSNN-FGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKE 290 (416)
T ss_dssp CSSSCEETTSSCCSEECS-SEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC-
T ss_pred CcccceeccccCCCccCC-CceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCC
Confidence 456778877665555444 6799999999999999999999999999999999999999999999999999999999866
Q ss_pred --------------eEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCC-CCceeecc---ccccCCCCCCHHHH
Q 042644 113 --------------QVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQ-NPGVVSIS---DAAFSDFDTIDDLV 174 (205)
Q Consensus 113 --------------~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~-~pg~~~~~---~~~f~~~~~~~evL 174 (205)
+++..+|++||+++||+|++|+++|. +++.+++++++. +|+.+.++ .++|+ .+|++||
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~--~~p~~vl 366 (416)
T 1uij_A 291 QQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVR--QIERQVQ 366 (416)
T ss_dssp -----------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGG--GSCHHHH
T ss_pred ccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHH--hCCHHHH
Confidence 46778999999999999999999998 689999988655 89999887 68998 7999999
Q ss_pred HhhcCCCHHHHHHhhhcCCC
Q 042644 175 RKFIPFLCWTIRVSEMSHFQ 194 (205)
Q Consensus 175 a~af~v~~~~v~~l~~~~~~ 194 (205)
+++|+++++++++|++++.+
T Consensus 367 a~af~~~~~~v~~l~~~~~~ 386 (416)
T 1uij_A 367 ELAFPGSAQDVERLLKKQRE 386 (416)
T ss_dssp HHHSSSCHHHHHHHTTSCCS
T ss_pred HHHHCcCHHHHHHHHhcCCc
Confidence 99999999999999987754
No 8
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.97 E-value=4.8e-30 Score=231.61 Aligned_cols=159 Identities=13% Similarity=0.102 Sum_probs=137.7
Q ss_pred CCCCceeecccCCCCCCCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCC
Q 042644 32 FASDFKSTKLRDAGDTDKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTN 111 (205)
Q Consensus 32 ~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~ 111 (205)
....+.|+.+..++.++.. ||+++.+++.+||+|+++++++++++|.||++++|||||+|+|+.||++|++++++++++
T Consensus 243 ~~~~~~~~l~~~~p~~~~~-~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~ 321 (445)
T 2cav_A 243 SSQDKPFNLRSRDPIYSNN-YGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLE 321 (445)
T ss_dssp ---CCCEETTSSCCSEESS-SEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-
T ss_pred CCcccceeccccCCCccCC-CceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCC
Confidence 3456788877666666666 889999999999999999999999999999999999999999999999999999999986
Q ss_pred C---------e--EEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEe-CCCCceeecc---ccccCCCCCCHHHHHh
Q 042644 112 R---------Q--VFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLN-SQNPGVVSIS---DAAFSDFDTIDDLVRK 176 (205)
Q Consensus 112 ~---------~--~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~-s~~pg~~~~~---~~~f~~~~~~~evLa~ 176 (205)
+ + ++..+|++||+++||+|++|++.|. +++.++++.+ +++|+.+.++ .++|+ .+|++||++
T Consensus 322 ~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~--~~p~~vla~ 397 (445)
T 2cav_A 322 QQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIR--QIPRQVSDL 397 (445)
T ss_dssp ----------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGG--GSCHHHHHH
T ss_pred CcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhh--hCCHHHHHH
Confidence 3 3 6899999999999999999999998 4677777654 4589988887 68888 799999999
Q ss_pred hcCCCHHHHHHhhhcCCCc
Q 042644 177 FIPFLCWTIRVSEMSHFQD 195 (205)
Q Consensus 177 af~v~~~~v~~l~~~~~~~ 195 (205)
+|+++.+++++|+.++.+.
T Consensus 398 af~v~~~~v~~l~~~~~e~ 416 (445)
T 2cav_A 398 TFPGSGEEVEELLENQKES 416 (445)
T ss_dssp HSSSCHHHHHHHHHHCCSC
T ss_pred HHCcCHHHHHHHHhcCCcc
Confidence 9999999999999877543
No 9
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.96 E-value=4.9e-30 Score=229.70 Aligned_cols=157 Identities=13% Similarity=0.126 Sum_probs=138.0
Q ss_pred CCceeecccCCCCCCCCCCeeEEEeccCCC-CCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC
Q 042644 34 SDFKSTKLRDAGDTDKFPYSSLTLVTAADF-PGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR 112 (205)
Q Consensus 34 ~df~~~~~~~~~~~~~~~g~~~~~~~~~~~-P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~ 112 (205)
..+.|+.+..++.++.. +|+++.+++.+| |+|+++|+++++++|.|||+.+|||||+|+|++||++|+++++++++++
T Consensus 226 ~~~~~nl~~~~p~~~n~-~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNN-FGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSEEET-TEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCceeCC-CCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 36788887776666444 668999999999 9999999999999999999999999999999999999999999998765
Q ss_pred -------------------------eEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE-eCCCCceeeccc---cc
Q 042644 113 -------------------------QVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL-NSQNPGVVSISD---AA 163 (205)
Q Consensus 113 -------------------------~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~~---~~ 163 (205)
+.+..+|++||+++||+|++||+.|.+ ++.++++. ++++|+.+.++. ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 567899999999999999999998854 57777654 455899999885 68
Q ss_pred cCCCCCCHHHHHhhcCCCHHHHHHhhhcCCCc
Q 042644 164 FSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQD 195 (205)
Q Consensus 164 f~~~~~~~evLa~af~v~~~~v~~l~~~~~~~ 195 (205)
|+ ++|+++|++||+++.+++++|++++++.
T Consensus 383 ~~--~~~~evla~af~v~~~~v~~L~~~q~e~ 412 (418)
T 3s7i_A 383 ID--QIEKQAKDLAFPGSGEQVEKLIKNQKES 412 (418)
T ss_dssp HH--HSCHHHHHHHSSSCHHHHHHHHHTCCSC
T ss_pred hh--cCCHHHHHHHhCCCHHHHHHHHhcCCcc
Confidence 87 7999999999999999999999988764
No 10
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.96 E-value=2e-29 Score=227.01 Aligned_cols=159 Identities=13% Similarity=0.130 Sum_probs=139.9
Q ss_pred CCCCCceeecccCCCCCCCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeC
Q 042644 31 IFASDFKSTKLRDAGDTDKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDT 110 (205)
Q Consensus 31 ~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~ 110 (205)
.....+.|+.+..++.++.. ||+++.+++.+||+|+++++++++++|.||++.+|||||+++|++||++|+++++++++
T Consensus 227 ~~~~~~~~~l~~~~p~~~~~-gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~ 305 (434)
T 2ea7_A 227 LSSQDEPFNLRNSKPIYSNK-FGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGL 305 (434)
T ss_dssp TTCSSSCEETTSSCCSEEET-TEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEE
T ss_pred CCCcccceeeccCCCceeCC-CcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEec
Confidence 34556788877666665555 78999999999999999999999999999999999999999999999999999999987
Q ss_pred CC-------------eEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeC-CCCceeecc---ccccCCCCCCHHH
Q 042644 111 NR-------------QVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNS-QNPGVVSIS---DAAFSDFDTIDDL 173 (205)
Q Consensus 111 ~~-------------~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s-~~pg~~~~~---~~~f~~~~~~~ev 173 (205)
++ +++..+|++||+++||+|++|++.|. +++.+++++++ ++++.+.++ .++|+ .+|++|
T Consensus 306 ~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~--~~p~~v 381 (434)
T 2ea7_A 306 SDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMS--EIPTEV 381 (434)
T ss_dssp EECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGG--GSCHHH
T ss_pred CccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhh--hCCHHH
Confidence 53 26777999999999999999999998 57888887755 478998888 58888 799999
Q ss_pred HHhhcCCCHHHHHHhhhcCCC
Q 042644 174 VRKFIPFLCWTIRVSEMSHFQ 194 (205)
Q Consensus 174 La~af~v~~~~v~~l~~~~~~ 194 (205)
|+++|+++.+++++|++++.+
T Consensus 382 la~af~v~~~~v~~l~~~~~e 402 (434)
T 2ea7_A 382 LEVSFPASGKKVEKLIKKQSE 402 (434)
T ss_dssp HHHHSSSCHHHHHHHHTTCCS
T ss_pred HHHHHCcCHHHHHHHHhcCCc
Confidence 999999999999999987644
No 11
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.96 E-value=1.2e-28 Score=224.96 Aligned_cols=148 Identities=18% Similarity=0.260 Sum_probs=136.0
Q ss_pred CCCCC-CCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC-eEEEEEEc
Q 042644 43 DAGDT-DKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR-QVFQVMLK 120 (205)
Q Consensus 43 ~~~~~-~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~l~ 120 (205)
..+++ ++. ||+++.+++.+||+|+++++++++++|.||++.+|||||+++|++||++|+++++++++++ +++..+|+
T Consensus 344 ~~~~~~~~~-gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~ 422 (510)
T 3c3v_A 344 RSPDIYNPQ-AGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQ 422 (510)
T ss_dssp SCCSEEETT-TEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEE
T ss_pred ccCCcccCC-CeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEc
Confidence 34555 777 9999999999999999999999999999999999999999999999999999999998764 66778899
Q ss_pred CCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCceeecc--ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCC
Q 042644 121 AGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSIS--DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQ 194 (205)
Q Consensus 121 ~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~ 194 (205)
+||+++||+|++|++.| |++++.+++++++.+|+...++ .++|+ .+|++||+++|+++.+++++|++...+
T Consensus 423 ~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~--~lp~eVla~aF~v~~e~v~~L~~~~~e 495 (510)
T 3c3v_A 423 EGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVID--NLPEEVVANSYGLPREQARQLKNNNPF 495 (510)
T ss_dssp TTCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTT--TSCHHHHHHHHTCCHHHHHHHHHSCCC
T ss_pred CCcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHH--hCCHHHHHHHHCcCHHHHHHHHhhCCC
Confidence 99999999999999999 8888899888888899999888 78998 799999999999999999999987654
No 12
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.96 E-value=9.8e-29 Score=197.96 Aligned_cols=157 Identities=15% Similarity=0.161 Sum_probs=129.3
Q ss_pred ceeecccCCCCCCCCCCeeEEEecc-----CCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeC
Q 042644 36 FKSTKLRDAGDTDKFPYSSLTLVTA-----ADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDT 110 (205)
Q Consensus 36 f~~~~~~~~~~~~~~~g~~~~~~~~-----~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~ 110 (205)
|+|...+........ ||+++.++. ..+|+++ ++++.+++++||++.+|| |+++.|++||++|+++++++++
T Consensus 4 ~~f~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~~ 79 (178)
T 1dgw_A 4 YLFRSNKFLTLFKNQ-HGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNP 79 (178)
T ss_dssp TEECGGGEEEEEEET-TEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEET
T ss_pred ceechhhcccceEcC-CCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEeC
Confidence 556644333333455 889999876 5677777 699999999999999999 9899999999999999999987
Q ss_pred CCeEEEEEEcCCCEEEeCCCCeeEEEecCCc-cEEEEEEE-eCCCCcee---ecc-----ccccCCCCCCHHHHHhhcCC
Q 042644 111 NRQVFQVMLKAGEVCVFPRGLLHFGFNVGYE-FATVFSVL-NSQNPGVV---SIS-----DAAFSDFDTIDDLVRKFIPF 180 (205)
Q Consensus 111 ~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~-~a~~l~~~-~s~~pg~~---~~~-----~~~f~~~~~~~evLa~af~v 180 (205)
++. ..+.|++||++++|+|.+|+++|.|++ ++++++++ ++++|+.+ .++ .++|+ ++|++||+++|++
T Consensus 80 ~~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~--~~p~~vla~af~v 156 (178)
T 1dgw_A 80 DGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS--AFSKNFLEASYDS 156 (178)
T ss_dssp TEE-EEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG--GSCHHHHHHHHTS
T ss_pred CCc-EEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhh--hCCHHHHHHHHCc
Confidence 654 478999999999999999999999986 78887765 45677743 332 57887 8999999999999
Q ss_pred CHHHHHHhhhcCCCcccEE
Q 042644 181 LCWTIRVSEMSHFQDNKLK 199 (205)
Q Consensus 181 ~~~~v~~l~~~~~~~~~i~ 199 (205)
+++++++|+.+.++++.|.
T Consensus 157 ~~~~~~~l~~~~~~~~~iv 175 (178)
T 1dgw_A 157 PYDEIEQTLLQEEQEGVIV 175 (178)
T ss_dssp CHHHHHHHTTSCCSSSSEE
T ss_pred CHHHHHHHhcCcCcCceEE
Confidence 9999999998877777664
No 13
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.96 E-value=1.6e-28 Score=223.10 Aligned_cols=148 Identities=20% Similarity=0.297 Sum_probs=135.8
Q ss_pred CCCCC-CCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC-eEEEEEEc
Q 042644 43 DAGDT-DKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR-QVFQVMLK 120 (205)
Q Consensus 43 ~~~~~-~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~l~ 120 (205)
..+++ ++. ||+++.+++.+||+|+++++++++++|+||++.+|||||+++|++||++|+++++++++++ +++..+|+
T Consensus 310 ~~~~~~~~~-gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~ 388 (476)
T 1fxz_A 310 SSPDIYNPQ-AGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQ 388 (476)
T ss_dssp SCCSEEETT-TEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEE
T ss_pred ccCCcccCC-CeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEc
Confidence 34455 777 9999999999999999999999999999999999999999999999999999999998764 56778899
Q ss_pred CCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCceeecc--ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCC
Q 042644 121 AGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSIS--DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQ 194 (205)
Q Consensus 121 ~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~ 194 (205)
+||+++||+|.+|++.| |++++.+++++++++|+...++ .++|+ .+|++||+++|+++++++++|++...+
T Consensus 389 ~GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~--~~p~~Vla~af~~~~~~v~~l~~~~~e 461 (476)
T 1fxz_A 389 EGRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLN--ALPEEVIQHTFNLKSQQARQIKNNNPF 461 (476)
T ss_dssp TTCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGG--GSCHHHHHHHHTCCHHHHHHHHHSCCC
T ss_pred CCCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHH--hCCHHHHHHHhCcCHHHHHHHHhhCCC
Confidence 99999999999999999 8889999998888899999887 78998 799999999999999999999987654
No 14
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.96 E-value=1.2e-28 Score=224.73 Aligned_cols=149 Identities=17% Similarity=0.215 Sum_probs=136.8
Q ss_pred CCCCC-CCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCC-CeEEEEEEc
Q 042644 43 DAGDT-DKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTN-RQVFQVMLK 120 (205)
Q Consensus 43 ~~~~~-~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~-~~~~~~~l~ 120 (205)
.++++ ++. ||+++.+++.+||+|+++++++++++++||++.+|||||+++|++||++|++++++++++ ++++..+|+
T Consensus 339 ~~~~~~~~~-gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~ 417 (493)
T 2d5f_A 339 SRADFYNPK-AGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELR 417 (493)
T ss_dssp GGCSEEETT-TEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCCcccCC-CeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEc
Confidence 56676 788 999999999999999999999999999999999999999999999999999999999875 456678899
Q ss_pred CCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCceeeccccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCCcc
Q 042644 121 AGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSISDAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQDN 196 (205)
Q Consensus 121 ~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~~~ 196 (205)
+||+++||+|.+|++.| +++++.+++++++++|+...+ .++|+ .+|++||+++|+++.+++++|++++.+..
T Consensus 418 ~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~--~~p~eVla~aF~v~~~~v~~l~~~~~e~~ 489 (493)
T 2d5f_A 418 RGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFR--AIPSEVLSNSYNLGQSQVRQLKYQGNSGP 489 (493)
T ss_dssp TTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHH--HSCHHHHHHHHTCCHHHHHHHHHSSCSSS
T ss_pred CCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHH--hCCHHHHHHHHCcCHHHHHHHHhcCCCce
Confidence 99999999999999998 568899999999999999988 88898 68999999999999999999999876543
No 15
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.95 E-value=5.5e-28 Score=218.67 Aligned_cols=146 Identities=16% Similarity=0.262 Sum_probs=127.5
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EE---------------
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VF--------------- 115 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~--------------- 115 (205)
+|.+.. +..+.|.|+++|++++|++|+|||+++|||| +++|++||++|++.+++++++++ .+
T Consensus 45 ~G~~~~-~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h-~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~ 122 (459)
T 2e9q_A 45 AGFTEV-WDQDNDEFQCAGVNMIRHTIRPKGLLLPGFS-NAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFK 122 (459)
T ss_dssp TEEEEE-CCTTSHHHHHHTEEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCC
T ss_pred CcEEEe-cCCCChhhccCceEEEEEEEcCCCEecceec-CCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccc
Confidence 767766 4556699999999999999999999999999 69999999999999999988753 12
Q ss_pred -----EEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCC--------Cceeecc----------------------
Q 042644 116 -----QVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQN--------PGVVSIS---------------------- 160 (205)
Q Consensus 116 -----~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~---------------------- 160 (205)
.++|++||+++||+|++||++|.|++++++++++++.+ +..|.++
T Consensus 123 d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~ 202 (459)
T 2e9q_A 123 DQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKGSS 202 (459)
T ss_dssp EEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC----------
T ss_pred cccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhccccccccccc
Confidence 46999999999999999999999999999999998655 4455554
Q ss_pred ----ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCCcccEEEe
Q 042644 161 ----DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 161 ----~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~~~~i~i~ 201 (205)
.++|+ +|++++|++||+++.+++++|+++++++|.|.=.
T Consensus 203 ~~~~~nif~--gf~~evLa~aF~v~~~~v~kL~~~~~~~G~Iv~~ 245 (459)
T 2e9q_A 203 GEKSGNIFS--GFADEFLEEAFQIDGGLVRKLKGEDDERDRIVQV 245 (459)
T ss_dssp --CCCCTTT--TSCHHHHHHHHTCCHHHHHHHHTTTCCSTTEEEC
T ss_pred cccccchhh--cCCHHHHHhhcCCCHHHHHhhhhcccCCccEEEe
Confidence 37888 8999999999999999999999999989887643
No 16
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.95 E-value=9.9e-28 Score=216.61 Aligned_cols=146 Identities=15% Similarity=0.286 Sum_probs=127.9
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC-eEE---------------
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR-QVF--------------- 115 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~--------------- 115 (205)
||.+..|+..+ +.|+++|++++|++|+|||+++|||| +++|++||++|++.++++.+++ +.|
T Consensus 32 ~G~~e~~d~~~-~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~ 109 (465)
T 3qac_A 32 RGLTEVWDSNE-QEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERI 109 (465)
T ss_dssp TEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC---------------
T ss_pred CcEEEEECCCC-hhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccc
Confidence 88888887554 68999999999999999999999999 9999999999999999998753 222
Q ss_pred ---------------------EEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCC---------Cceeecc-----
Q 042644 116 ---------------------QVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQN---------PGVVSIS----- 160 (205)
Q Consensus 116 ---------------------~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~---------pg~~~~~----- 160 (205)
...+++||++++|+|++||++|.|++++++++++++.+ +..|.++
T Consensus 110 ~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~~~~ 189 (465)
T 3qac_A 110 REQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGKPQQ 189 (465)
T ss_dssp ---------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSCCCC
T ss_pred ccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCCCcc
Confidence 45899999999999999999999999999999998654 4456665
Q ss_pred -------------------ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCCcccEEEe
Q 042644 161 -------------------DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 161 -------------------~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~~~~i~i~ 201 (205)
.++|+ +|++++|++||+++.+++++|++++++++.|+=.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~ni~s--gF~~e~La~Af~v~~~~~~kl~~~q~~rG~Ivrv 247 (465)
T 3qac_A 190 EHSGEHQFSRESRRGERNTGNIFR--GFETRLLAESFGVSEEIAQKLQAEQDDRGNIVRV 247 (465)
T ss_dssp SCC--------------CCCCGGG--GSCHHHHHHHHTCCHHHHHHHHTTTCCSCSEEEC
T ss_pred ccccccccccccccccccccchhh--cCCHHHHHHHhCCCHHHHHHhhhccccceeEEEe
Confidence 36898 8999999999999999999999999988866533
No 17
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.94 E-value=4.3e-27 Score=213.92 Aligned_cols=147 Identities=13% Similarity=0.191 Sum_probs=126.0
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC-eEE---------------
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR-QVF--------------- 115 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~--------------- 115 (205)
||.+..+ ..++|+|+++|++++|++|+|||+++|||| +|+|++||++|++.++++.+++ +.+
T Consensus 28 ~G~~e~~-~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~ 105 (496)
T 3ksc_A 28 GGLIETW-NPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYR 105 (496)
T ss_dssp TEEEEEC-CTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC---------------C
T ss_pred CcEEEec-cccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccc
Confidence 6666555 478899999999999999999999999999 9999999999999999999862 333
Q ss_pred -----EEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCC--------ceeecc----------------------
Q 042644 116 -----QVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNP--------GVVSIS---------------------- 160 (205)
Q Consensus 116 -----~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~---------------------- 160 (205)
..+|++||+|+||+|++||++|.|+++++++++|+..++ ..+.++
T Consensus 106 d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~ 185 (496)
T 3ksc_A 106 DRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQEN 185 (496)
T ss_dssp CCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC----------
T ss_pred cchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCccccccccccccccccccc
Confidence 359999999999999999999999999999999987653 234443
Q ss_pred --ccccCCCCCCHHHHHhhcCCCHHHHHHhh--hcCCCcccEEEee
Q 042644 161 --DAAFSDFDTIDDLVRKFIPFLCWTIRVSE--MSHFQDNKLKIMK 202 (205)
Q Consensus 161 --~~~f~~~~~~~evLa~af~v~~~~v~~l~--~~~~~~~~i~i~~ 202 (205)
.++|+ +|+.++|+.||+++.+++++|+ +..++++.|+=++
T Consensus 186 ~~~ni~s--gF~~e~La~Af~v~~e~~~kl~~~~~~~~rg~IV~v~ 229 (496)
T 3ksc_A 186 EGNNIFS--GFKRDFLEDAFNVNRHIVDRLQGRNEDEEKGAIVKVK 229 (496)
T ss_dssp -CCSGGG--GSCHHHHHHHHTCCHHHHHHHTTTTCCTTTCSEEECS
T ss_pred cCCCchh--hcCHHHHHHHHCCCHHHHHHHHhhcccccCccEEEec
Confidence 47888 8999999999999999999999 7777787766443
No 18
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.94 E-value=2.9e-27 Score=214.84 Aligned_cols=145 Identities=9% Similarity=0.137 Sum_probs=123.5
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeE-----------------
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQV----------------- 114 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~----------------- 114 (205)
+|.+..++ .+.|.|+++|++++|++|+|||+++|||| +++|++||++|++.+++++++++.
T Consensus 30 ~G~~e~~~-~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~-~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~ 107 (476)
T 1fxz_A 30 GGLIETWN-PNNKPFQCAGVALSRCTLNRNALRRPSYT-NGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRP 107 (476)
T ss_dssp TEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC----------------
T ss_pred CceEEeeC-CCChhhccCceEEEEEEEcCCCEecceec-CCceEEEEEecEEEEEEEcCCCcchhhcccccccccccccc
Confidence 77777655 55599999999999999999999999999 589999999999999999987541
Q ss_pred -----EEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCC--------ceeecc---------------------
Q 042644 115 -----FQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNP--------GVVSIS--------------------- 160 (205)
Q Consensus 115 -----~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~--------------------- 160 (205)
..+.|++||+|+||+|++||++|.|+++++++++++..++ ..|.++
T Consensus 108 ~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~ 187 (476)
T 1fxz_A 108 QDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQK 187 (476)
T ss_dssp --CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC---------
T ss_pred ccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCccccccccccccccccccc
Confidence 2689999999999999999999999999999999985543 445454
Q ss_pred -----------ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCC--CcccEEE
Q 042644 161 -----------DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHF--QDNKLKI 200 (205)
Q Consensus 161 -----------~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~--~~~~i~i 200 (205)
.++|+ +|++++|++||+++.+++++|++.++ +++.|.=
T Consensus 188 ~~~~~~~~~~~~~if~--gf~~~vLa~af~v~~~~~~kl~~~~~~~~~g~Iv~ 238 (476)
T 1fxz_A 188 GKHQQEEENEGGSILS--GFTLEFLEHAFSVDKQIAKNLQGENEGEDKGAIVT 238 (476)
T ss_dssp ----------CCCGGG--GSCHHHHHHHHTCCHHHHHHHSCC-----CCSEEE
T ss_pred cccccccccccchhhh--cCCHHHHHhhhCCCHHHHHhhhccccccccccEEE
Confidence 36887 89999999999999999999999888 7777663
No 19
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.94 E-value=2.3e-26 Score=204.68 Aligned_cols=136 Identities=15% Similarity=0.093 Sum_probs=121.0
Q ss_pred CCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeC------C-CeEEEEEEc
Q 042644 48 DKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDT------N-RQVFQVMLK 120 (205)
Q Consensus 48 ~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~------~-~~~~~~~l~ 120 (205)
+.. +|+++.+++.+ +++++++++|.||++.+|||||+++|+.||++|+++++++++ + ++.+..+|+
T Consensus 223 ~n~-~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~ 295 (397)
T 2phl_A 223 GNE-FGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELS 295 (397)
T ss_dssp EET-TEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEE
T ss_pred cCC-CCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEec
Confidence 444 77899999887 799999999999999999999999999999999999999987 3 478899999
Q ss_pred CCCEEEeCCCCeeEEEecCCccEEEEEEEeC-CCCceeecc---ccccCCCCCC-----HHHHHhhcCCCHHHHHHhhhc
Q 042644 121 AGEVCVFPRGLLHFGFNVGYEFATVFSVLNS-QNPGVVSIS---DAAFSDFDTI-----DDLVRKFIPFLCWTIRVSEMS 191 (205)
Q Consensus 121 ~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s-~~pg~~~~~---~~~f~~~~~~-----~evLa~af~v~~~~v~~l~~~ 191 (205)
+||+++||+|++|+++|.+ ++.++++.++ ++|+.+.++ .++|+ .+| ++||+++|+++++++++|+++
T Consensus 296 ~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~--~~p~~~~~~eVla~af~v~~~~v~~l~~~ 371 (397)
T 2phl_A 296 KDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVIS--SIGRALDGKDVLGLTFSGSGDEVMKLINK 371 (397)
T ss_dssp TTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHH--HHHTSTTHHHHHHHHSSSCHHHHHHHHTT
T ss_pred CCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHh--hCCCccchHHHHHHHhCcCHHHHHHHHhc
Confidence 9999999999999999985 7888886654 489988887 67887 455 999999999999999999988
Q ss_pred CCC
Q 042644 192 HFQ 194 (205)
Q Consensus 192 ~~~ 194 (205)
+.+
T Consensus 372 ~~e 374 (397)
T 2phl_A 372 QSG 374 (397)
T ss_dssp CCC
T ss_pred CCc
Confidence 643
No 20
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.94 E-value=3.8e-26 Score=208.25 Aligned_cols=145 Identities=19% Similarity=0.261 Sum_probs=124.3
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe------------------
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ------------------ 113 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~------------------ 113 (205)
||.+.. +..+.|.|+++|+++++++|+|||+++|||| +++|++||++|++.++++.+++.
T Consensus 27 ~G~~e~-~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~-~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~ 104 (493)
T 2d5f_A 27 GGLIET-WNSQHPELQCAGVTVSKRTLNRNGLHLPSYS-PYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQ 104 (493)
T ss_dssp SEEEEE-CCTTSHHHHHHTCEEEEEEECTTEEEEEEEC-SSCEEEEEEECEEEEEECCTTCCCCEEECC-----------
T ss_pred CcEEEE-eCCCChhhccCCEEEEEEEeCCCcEeCceec-CCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccc
Confidence 655554 5566699999999999999999999999999 57899999999999999976631
Q ss_pred -------EEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCC--------Cceeecc------------------
Q 042644 114 -------VFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQN--------PGVVSIS------------------ 160 (205)
Q Consensus 114 -------~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~------------------ 160 (205)
...+.|++||+|+||+|++||++|.|+++++++++++..+ +..|.++
T Consensus 105 ~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~ 184 (493)
T 2d5f_A 105 QQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQK 184 (493)
T ss_dssp --CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC------
T ss_pred cccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccccc
Confidence 0256899999999999999999999999999999998443 2444554
Q ss_pred -----------------ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCCcccEEE
Q 042644 161 -----------------DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQDNKLKI 200 (205)
Q Consensus 161 -----------------~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~~~~i~i 200 (205)
.++|+ +|++++|++||+++.+++++|++.+++++.|.=
T Consensus 185 ~~~~~~~~~~~~~~~~~~nif~--gf~~e~La~aF~v~~~~v~kl~~~~~~~g~Iv~ 239 (493)
T 2d5f_A 185 SHGGRKQGQHQQQEEEGGSVLS--GFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVT 239 (493)
T ss_dssp ---------------CCCCGGG--GSCHHHHHHHTTCCHHHHHHTTCTTCCSCSEEE
T ss_pred ccccccccccccccccccchhh--cCCHHHHHhHhCCCHHHHHHhhhcccCcccEEE
Confidence 36887 899999999999999999999999998987764
No 21
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.93 E-value=3.8e-26 Score=208.00 Aligned_cols=147 Identities=15% Similarity=0.270 Sum_probs=126.3
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeE-E---------------
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQV-F--------------- 115 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~-~--------------- 115 (205)
||.+..|+ .++|+|+++|++++|++|.|+|+++||||+ ++|++||++|++.++++.|++-. |
T Consensus 30 ~G~~e~w~-~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~~~ 107 (531)
T 3fz3_A 30 AGQIETWN-FNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQEQ 107 (531)
T ss_dssp TEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC----------
T ss_pred CceEEEeC-CCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccccccccccc
Confidence 77776665 679999999999999999999999999995 99999999999999999885210 0
Q ss_pred -----------------------------------------------------------------EEEEcCCCEEEeCCC
Q 042644 116 -----------------------------------------------------------------QVMLKAGEVCVFPRG 130 (205)
Q Consensus 116 -----------------------------------------------------------------~~~l~~GDv~~vP~G 130 (205)
...+++||+++||+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiPaG 187 (531)
T 3fz3_A 108 EQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIPAG 187 (531)
T ss_dssp ---------------------------------------------------------CCSCEESCCEEEETTEEEEECTT
T ss_pred cccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEECCC
Confidence 357899999999999
Q ss_pred CeeEEEecCCccEEEEEEEeCCC--------Cceeecc------------------------------------------
Q 042644 131 LLHFGFNVGYEFATVFSVLNSQN--------PGVVSIS------------------------------------------ 160 (205)
Q Consensus 131 ~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~------------------------------------------ 160 (205)
++||++|.|+++++++++++..+ |..|.++
T Consensus 188 ~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (531)
T 3fz3_A 188 VAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQQGN 267 (531)
T ss_dssp CCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC--------------------------------C
T ss_pred CeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhhccc
Confidence 99999999999999999997543 3334443
Q ss_pred -ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCCcccEEEee
Q 042644 161 -DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQDNKLKIMK 202 (205)
Q Consensus 161 -~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~~~~i~i~~ 202 (205)
.++|+ +|+.++|++||+++.+++++|++++++++.|+=.+
T Consensus 268 ~~nifs--GFs~e~La~A~~v~~~~a~kLq~~~~~rg~IVrv~ 308 (531)
T 3fz3_A 268 GNNVFS--GFNTQLLAQALNVNEETARNLQGQNDNRNQIIQVR 308 (531)
T ss_dssp CSSGGG--GSCHHHHHHHHTSCHHHHHHHHTSSCCSCSEEECS
T ss_pred CCCeee--cCCHHHHHHHHCCCHHHHHHHhcccccCceEEEec
Confidence 26888 89999999999999999999999999998776544
No 22
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.93 E-value=5.1e-26 Score=205.51 Aligned_cols=146 Identities=16% Similarity=0.214 Sum_probs=127.0
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeE-E---------------
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQV-F--------------- 115 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~-~--------------- 115 (205)
||.+..|+..+ |+|+++|++++|++++|+|+++||||+ ++|++||++|++.++++.+++.. +
T Consensus 25 ~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~ 102 (466)
T 3kgl_A 25 AGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFG 102 (466)
T ss_dssp TEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC-----
T ss_pred CcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccc
Confidence 88888887666 999999999999999999999999995 99999999999999999885321 1
Q ss_pred -------------------------------------------EEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCC
Q 042644 116 -------------------------------------------QVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQ 152 (205)
Q Consensus 116 -------------------------------------------~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~ 152 (205)
...|++||+++||+|++||++|.|+++++++++++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~~ 182 (466)
T 3kgl_A 103 EGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLA 182 (466)
T ss_dssp ------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEESS
T ss_pred ccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcCC
Confidence 1489999999999999999999999999999999765
Q ss_pred CC--------ceeecc------------------ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcCCCcccEEEe
Q 042644 153 NP--------GVVSIS------------------DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 153 ~p--------g~~~~~------------------~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~~~~~~i~i~ 201 (205)
+. ..|.++ .++|+ +|+.++|++||+++.+++++|++++++++.|.=.
T Consensus 183 n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~s--GF~~e~La~Af~v~~e~~~kL~~~q~~~G~Iv~v 255 (466)
T 3kgl_A 183 SHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILN--GFTPEVLAKAFKIDVRTAQQLQNQQDNRGNIIRV 255 (466)
T ss_dssp STTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGG--GSCHHHHHHHHTSCHHHHHHHTCTTCCSCSEEEC
T ss_pred CcccccCCceeeeEecCCCccccccccccccccCCCccc--cCCHHHHHHHhCCCHHHHHHHhccccCceeEEEe
Confidence 43 445554 27887 8999999999999999999999999888876644
No 23
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.93 E-value=5.3e-26 Score=207.48 Aligned_cols=146 Identities=12% Similarity=0.157 Sum_probs=124.4
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeE-----------------
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQV----------------- 114 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~----------------- 114 (205)
||.+..+ ..+.|+|+++|+++++++|+|||+.+|||| +++|++||++|++.++++++++..
T Consensus 30 ~G~~e~~-~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~-~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~ 107 (510)
T 3c3v_A 30 GGYIETW-NPNNQEFECAGVALSRLVLRRNALRRPFYS-NAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRP 107 (510)
T ss_dssp TEEEEEC-CTTSHHHHHHTCEEEEEEECTTEEEEEEEC-SSCEEEEEEECCEEEEEECTTCCCCEEEECCC---------
T ss_pred CceEEEe-CCCCcccccCcEEEEEEEECCCCCccceec-CCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccc
Confidence 7666655 456699999999999999999999999999 589999999999999999876410
Q ss_pred ------------------EEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCC--------Cceeecc--------
Q 042644 115 ------------------FQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQN--------PGVVSIS-------- 160 (205)
Q Consensus 115 ------------------~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~-------- 160 (205)
....|++||+|+||+|++||++|.|+++++++++++..+ +..|.++
T Consensus 108 ~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~~~ 187 (510)
T 3c3v_A 108 PRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQEFL 187 (510)
T ss_dssp -----------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCTTG
T ss_pred cccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCcccccc
Confidence 137899999999999999999999999999999998665 3334443
Q ss_pred ----------------------------------------------------ccccCCCCCCHHHHHhhcCCC-HHHHHH
Q 042644 161 ----------------------------------------------------DAAFSDFDTIDDLVRKFIPFL-CWTIRV 187 (205)
Q Consensus 161 ----------------------------------------------------~~~f~~~~~~~evLa~af~v~-~~~v~~ 187 (205)
.++|+ +|++++|++||+++ ++++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~s--gF~~~~La~af~v~~~~~~~~ 265 (510)
T 3c3v_A 188 RYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFS--GFTPEFLAQAFQVDDRQIVQN 265 (510)
T ss_dssp GGCC------------------------------------------------CCTGG--GSCHHHHHHHHTCCCHHHHHH
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccee--cCCHHHHHHHhCCCHHHHHHH
Confidence 25887 89999999999999 999999
Q ss_pred hhhcCC--CcccEEEe
Q 042644 188 SEMSHF--QDNKLKIM 201 (205)
Q Consensus 188 l~~~~~--~~~~i~i~ 201 (205)
|+++++ +++.|.=.
T Consensus 266 l~~~~~~~~~g~Iv~v 281 (510)
T 3c3v_A 266 LRGENESEEQGAIVTV 281 (510)
T ss_dssp HTTTTCCTTSCSEEEC
T ss_pred hhccccccccccEEEe
Confidence 999888 77776643
No 24
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.93 E-value=2e-25 Score=201.37 Aligned_cols=161 Identities=15% Similarity=0.151 Sum_probs=131.6
Q ss_pred CCceeecccCCCCCCCCCCeeEEEecc--CCCCCCCccc-eEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeC
Q 042644 34 SDFKSTKLRDAGDTDKFPYSSLTLVTA--ADFPGLNTLG-LSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDT 110 (205)
Q Consensus 34 ~df~~~~~~~~~~~~~~~g~~~~~~~~--~~~P~l~~~g-is~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~ 110 (205)
+-|+|............ +|++..++. .+.|.+++++ +++++++++||++.+|| |++++|++||++|+++++++++
T Consensus 47 ~p~vf~~~~~~~~i~~e-~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~ 124 (445)
T 2cav_A 47 NPYLFRSNKFLTLFKNQ-HGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNP 124 (445)
T ss_dssp CTTEECGGGEEEEEEET-TEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEET
T ss_pred CCeEEchhhcCceEEcC-CEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeC
Confidence 34665543221122234 778887643 5567888887 99999999999999999 6699999999999999999987
Q ss_pred CCeEEEEEEcCCCEEEeCCCCeeEEEecC-CccEEEEEEEe-CCCCce---eecc-----ccccCCCCCCHHHHHhhcCC
Q 042644 111 NRQVFQVMLKAGEVCVFPRGLLHFGFNVG-YEFATVFSVLN-SQNPGV---VSIS-----DAAFSDFDTIDDLVRKFIPF 180 (205)
Q Consensus 111 ~~~~~~~~l~~GDv~~vP~G~~H~~~N~g-~~~a~~l~~~~-s~~pg~---~~~~-----~~~f~~~~~~~evLa~af~v 180 (205)
+++ +.+.|++||++++|+|..||++|.| +++++++++++ +++|+. +.++ .++|+ ++|+++|+++|++
T Consensus 125 ~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~--~~~~~vLa~af~v 201 (445)
T 2cav_A 125 DGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS--AFSKNFLEASYDS 201 (445)
T ss_dssp TEE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG--GSCHHHHHHHHTS
T ss_pred CCC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhh--cCCHHHHHHHhCC
Confidence 665 7899999999999999999999998 89999999887 555653 3344 36888 7999999999999
Q ss_pred CHHHHHHhhhcCCCcccEE
Q 042644 181 LCWTIRVSEMSHFQDNKLK 199 (205)
Q Consensus 181 ~~~~v~~l~~~~~~~~~i~ 199 (205)
+++++++|++..++++.|.
T Consensus 202 ~~~~v~~l~~~~~~~g~Iv 220 (445)
T 2cav_A 202 PYDEIEQTLLQEEQEGVIV 220 (445)
T ss_dssp CHHHHHHHTTSCCSSSSEE
T ss_pred CHHHHHhhhcccCCCCcEE
Confidence 9999999998777777765
No 25
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.93 E-value=1.8e-25 Score=198.95 Aligned_cols=146 Identities=13% Similarity=0.155 Sum_probs=124.6
Q ss_pred CCCCCeeEEEe--ccCCCCCCCccc-eEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCE
Q 042644 48 DKFPYSSLTLV--TAADFPGLNTLG-LSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEV 124 (205)
Q Consensus 48 ~~~~g~~~~~~--~~~~~P~l~~~g-is~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv 124 (205)
... ||.++.+ +..+.|.|++++ +++++++++|||+.+|||| +++|++||++|++++++++++++ +++.|++||+
T Consensus 27 ~~e-~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v~~~~~-~~~~l~~GDv 103 (397)
T 2phl_A 27 KNQ-YGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLVKPDDR-REYFFLTSDN 103 (397)
T ss_dssp EET-TEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEEETTTE-EEEEEEESSC
T ss_pred EcC-CEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEEeCCCc-EEEEECCCCc
Confidence 444 8899987 556669999998 9999999999999999999 89999999999999999998777 5899999999
Q ss_pred ------EEeCCCCeeEEEecC-CccEEEEEEEeCCC-C--ceeeccc-----cccCCCCCCHHHHHhhcCCCHHHHHHhh
Q 042644 125 ------CVFPRGLLHFGFNVG-YEFATVFSVLNSQN-P--GVVSISD-----AAFSDFDTIDDLVRKFIPFLCWTIRVSE 189 (205)
Q Consensus 125 ------~~vP~G~~H~~~N~g-~~~a~~l~~~~s~~-p--g~~~~~~-----~~f~~~~~~~evLa~af~v~~~~v~~l~ 189 (205)
++||+|.+||++|.| ++++++++++++.+ | ..+.++. ++|+ ++|++||+++|+++++++++|+
T Consensus 104 ~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~--~~~~~vLa~af~v~~~~v~~l~ 181 (397)
T 2phl_A 104 PIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQ--EFSKHILEASFNSKFEEINRVL 181 (397)
T ss_dssp TTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGG--GSCHHHHHHHHTSCHHHHHHHH
T ss_pred ccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhh--cCCHHHHHHHhCCCHHHHHhhh
Confidence 999999999999999 78999999987543 3 3345442 5887 8999999999999999999999
Q ss_pred hcC-C-CcccE
Q 042644 190 MSH-F-QDNKL 198 (205)
Q Consensus 190 ~~~-~-~~~~i 198 (205)
.++ + +++.|
T Consensus 182 ~~~~~q~~~~I 192 (397)
T 2phl_A 182 FEEEGQQEGVI 192 (397)
T ss_dssp TCSTTCBSSSE
T ss_pred hcccccccCce
Confidence 444 3 34444
No 26
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.93 E-value=3.1e-25 Score=199.69 Aligned_cols=138 Identities=15% Similarity=0.191 Sum_probs=119.1
Q ss_pred CeeEEEe--ccCCCCCCCccc-eEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeC
Q 042644 52 YSSLTLV--TAADFPGLNTLG-LSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFP 128 (205)
Q Consensus 52 g~~~~~~--~~~~~P~l~~~g-is~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP 128 (205)
||++..+ +..+.|.|++++ +++++++++||++.+|| |++++|++||++|++++++++++ +.+.+.|++||++++|
T Consensus 39 ~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~~~-~~~~~~l~~GDv~~iP 116 (434)
T 2ea7_A 39 WGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVNPD-SRDSYILEQGHAQKIP 116 (434)
T ss_dssp TEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECSS-CEEEEEEETTEEEEEC
T ss_pred CEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEeCC-CCEEEEeCCCCEEEEC
Confidence 8899887 446668899998 99999999999999999 77999999999999999999854 4568999999999999
Q ss_pred CCCeeEEEecC-CccEEEEEEEe-CCCCce---eeccc-----cccCCCCCCHHHHHhhcCCCHHHHHHhh-hcCC
Q 042644 129 RGLLHFGFNVG-YEFATVFSVLN-SQNPGV---VSISD-----AAFSDFDTIDDLVRKFIPFLCWTIRVSE-MSHF 193 (205)
Q Consensus 129 ~G~~H~~~N~g-~~~a~~l~~~~-s~~pg~---~~~~~-----~~f~~~~~~~evLa~af~v~~~~v~~l~-~~~~ 193 (205)
+|.+||++|.| +++++++++++ +++|+. +.++. ++|+ ++|++||+++|+++++++++|+ +.++
T Consensus 117 ~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~--~~~~~vLa~af~v~~~~v~~l~~~~~~ 190 (434)
T 2ea7_A 117 AGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLR--GFSKNILEASFDSDFKEINRVLFGEER 190 (434)
T ss_dssp TTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGG--GSCHHHHHHHHTSCHHHHHHHHTCC--
T ss_pred CCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhh--cCCHHHHHHHhCCCHHHHHhhhhcccc
Confidence 99999999998 88999999875 556653 34544 4887 8999999999999999999999 6543
No 27
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.93 E-value=2.6e-25 Score=199.30 Aligned_cols=144 Identities=17% Similarity=0.196 Sum_probs=122.4
Q ss_pred CeeEEEe--ccCCCCCCCccc-eEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeC
Q 042644 52 YSSLTLV--TAADFPGLNTLG-LSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFP 128 (205)
Q Consensus 52 g~~~~~~--~~~~~P~l~~~g-is~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP 128 (205)
||++..+ +..+.+.|++++ +++++++++||++.+|| |++++|++||++|+++++++++ ++.+++.|++||++++|
T Consensus 27 ~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP 104 (416)
T 1uij_A 27 NGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQRIP 104 (416)
T ss_dssp SEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEEEEC
T ss_pred CEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEEEEC
Confidence 8898886 334557888887 99999999999999999 7799999999999999999987 45568999999999999
Q ss_pred CCCeeEEEecC-CccEEEEEEEe-CCCCce---eeccc-----cccCCCCCCHHHHHhhcCCCHHHHHHhh-hcCC----
Q 042644 129 RGLLHFGFNVG-YEFATVFSVLN-SQNPGV---VSISD-----AAFSDFDTIDDLVRKFIPFLCWTIRVSE-MSHF---- 193 (205)
Q Consensus 129 ~G~~H~~~N~g-~~~a~~l~~~~-s~~pg~---~~~~~-----~~f~~~~~~~evLa~af~v~~~~v~~l~-~~~~---- 193 (205)
+|.+||++|.| +++++++++++ +++|+. +.+++ ++|+ ++|++||+++|+++++++++|+ +.++
T Consensus 105 ~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~--~~~~~vLa~af~v~~~~v~~l~~~~~~~~~~ 182 (416)
T 1uij_A 105 AGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQ--GFSHNILETSFHSEFEEINRVLFGEEEEQRQ 182 (416)
T ss_dssp TTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGG--GSCHHHHHHHHTSCHHHHHHHHTCTTCGGGS
T ss_pred CCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhh--cCCHHHHHHHhCcCHHHHHhhhhcccccccc
Confidence 99999999995 99999999986 456653 34443 4887 8999999999999999999999 6653
Q ss_pred CcccEE
Q 042644 194 QDNKLK 199 (205)
Q Consensus 194 ~~~~i~ 199 (205)
+++.|.
T Consensus 183 ~~g~Iv 188 (416)
T 1uij_A 183 QEGVIV 188 (416)
T ss_dssp BSSSEE
T ss_pred CcceEE
Confidence 456554
No 28
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.92 E-value=4.6e-24 Score=186.69 Aligned_cols=159 Identities=17% Similarity=0.159 Sum_probs=140.1
Q ss_pred CCCCCCCCceeecccCCCCCCCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEE
Q 042644 28 PDRIFASDFKSTKLRDAGDTDKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGF 107 (205)
Q Consensus 28 ~~~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~ 107 (205)
+...+.++|+++.+..++..+.. |++++.+...++|+++ .+++.+++++||+..++|||+++.|++||++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~-gg~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQPLVSLG-GNELRLASAKEFPGSF--NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCCSEEET-TEEEEEECTTTCTTST--TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCCcccCC-CceEEEEehhhCcCcc--cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 34567889999888766533666 8899999999999887 57889999999999999999988999999999999999
Q ss_pred EeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCceeeccccccCCCCCCHHHHHhhcCCCHHHHHH
Q 042644 108 VDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSISDAAFSDFDTIDDLVRKFIPFLCWTIRV 187 (205)
Q Consensus 108 ~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~~f~~~~~~~evLa~af~v~~~~v~~ 187 (205)
++++++...+.|++||++++|+|.+|++.|.|+++++++++++..+++...++. +++ .+|++||+++|+++++++++
T Consensus 271 ~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~-~~~--~~~~~vl~~~f~~~~~~~~~ 347 (361)
T 2vqa_A 271 FASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLST-WLA--SNPSSVLGNTFQISPELTKK 347 (361)
T ss_dssp ECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHH-HHH--TSCHHHHHHHHTCCHHHHTT
T ss_pred EcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHH-Hhh--hCCHHHHHHHHCcCHHHHHh
Confidence 887777668999999999999999999999999999999999999999888876 565 69999999999999999999
Q ss_pred hhhcC
Q 042644 188 SEMSH 192 (205)
Q Consensus 188 l~~~~ 192 (205)
|+++.
T Consensus 348 l~~~~ 352 (361)
T 2vqa_A 348 LPVQD 352 (361)
T ss_dssp SCCSC
T ss_pred hhccC
Confidence 98544
No 29
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.92 E-value=1.9e-24 Score=193.44 Aligned_cols=135 Identities=14% Similarity=0.236 Sum_probs=112.5
Q ss_pred CeeEEEec-----cCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEE
Q 042644 52 YSSLTLVT-----AADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCV 126 (205)
Q Consensus 52 g~~~~~~~-----~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~ 126 (205)
+|.++.+. ...||+|+ ++++++++++|+|+++|| |++|+|++||++|+++++++++++ .+.++|++||+++
T Consensus 22 ~G~i~~l~~f~~~s~~l~~l~--~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~~~-~~~~~l~~GDv~~ 97 (418)
T 3s7i_A 22 NGRIRVLQRFDQRSRQFQNLQ--NHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANGNN-RKSFNLDEGHALR 97 (418)
T ss_dssp SEEEEEECCHHHHCGGGGGGT--TCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECSSC-EEEEEEETTEEEE
T ss_pred CcEEEEecccCCcchhccccc--ceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEecCC-EEEEEecCCCEEE
Confidence 77999884 34566666 678889999999999999 889999999999999999999754 4689999999999
Q ss_pred eCCCCeeEEEecCC-ccEEEEEE-EeCCCCceeec---c-----ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcC
Q 042644 127 FPRGLLHFGFNVGY-EFATVFSV-LNSQNPGVVSI---S-----DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSH 192 (205)
Q Consensus 127 vP~G~~H~~~N~g~-~~a~~l~~-~~s~~pg~~~~---~-----~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~ 192 (205)
||+|++||++|.|. +.++++++ +++++||.+.. + .++|+ +||+++|++||+++++++++|+.+.
T Consensus 98 ~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~--gf~~evLa~af~v~~~~v~kl~~~~ 171 (418)
T 3s7i_A 98 IPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQ--GFSRNTLEAAFNAEFNEIRRVLLEE 171 (418)
T ss_dssp ECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGG--GSCHHHHHHHHTSCHHHHHHHTTSC
T ss_pred ECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhh--cCCHHHHHHHHCcCHHHHHhhhccc
Confidence 99999999999875 45666653 56667875432 2 35887 8999999999999999999999553
No 30
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.87 E-value=3.7e-21 Score=168.18 Aligned_cols=150 Identities=18% Similarity=0.151 Sum_probs=126.5
Q ss_pred CceeecccCCCCCCCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeE
Q 042644 35 DFKSTKLRDAGDTDKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQV 114 (205)
Q Consensus 35 df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~ 114 (205)
.|.|+.-..+. .... ||+++.++..++|.+. ++++.++.+.||+..++|||+++.|++||++|++++.+++++++.
T Consensus 20 ~~~~~~~~~~~-~~~~-~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~ 95 (361)
T 2vqa_A 20 AFTYAFSKTPL-VLYD-GGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKV 95 (361)
T ss_dssp CSEECGGGSCC-EEET-TEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCE
T ss_pred ceEEEcccCCc-eecC-CceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcE
Confidence 36666544432 3234 8899999999999887 679999999999999999998899999999999999999877654
Q ss_pred EEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCc---eeeccccccCCCCCCHHHHHhhcCCCHHHHHHhhhc
Q 042644 115 FQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPG---VVSISDAAFSDFDTIDDLVRKFIPFLCWTIRVSEMS 191 (205)
Q Consensus 115 ~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg---~~~~~~~~f~~~~~~~evLa~af~v~~~~v~~l~~~ 191 (205)
..+.|++||+++||+|.+|+++|.|+++++++.+++..++. .+.. .++|+ .+|.++|+++|+++.+.+++++..
T Consensus 96 ~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~-~~~~~--~~p~~vLa~~~~v~~~~~~~l~~~ 172 (361)
T 2vqa_A 96 EIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSV-TDWLS--HTPIAWVEENLGWTAAQVAQLPKK 172 (361)
T ss_dssp EEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEH-HHHHH--TSCHHHHHHHHTCCHHHHTTSCSS
T ss_pred EEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecH-hHHHH--hCCHHHHHHHhCcCHHHHHhcccc
Confidence 46899999999999999999999999999999999887664 3433 45666 799999999999999999988864
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.81 E-value=1e-18 Score=154.11 Aligned_cols=153 Identities=14% Similarity=0.155 Sum_probs=125.7
Q ss_pred CCCceeecccCCCCCCCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC
Q 042644 33 ASDFKSTKLRDAGDTDKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR 112 (205)
Q Consensus 33 ~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~ 112 (205)
...|+++....+. .... ++.+..+...+++..+ ++++.+++++||+..++|||+.+.|++||++|++++.+.++++
T Consensus 223 ~~~~v~~~~~~~~-~~~~-~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g 298 (385)
T 1j58_A 223 PYPFTYRLLEQEP-IESE-GGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDG 298 (385)
T ss_dssp SSCSEEEGGGSCC-EECS-SEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETT
T ss_pred CCCeeeecccCCC-eeCC-CceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCC
Confidence 4567777654443 3333 6688888887777544 6899999999999999999988799999999999999876565
Q ss_pred eEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCceeeccccccCCCCCCHHHHHhhcCCCHHHHHHhhhcC
Q 042644 113 QVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSISDAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSH 192 (205)
Q Consensus 113 ~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~ 192 (205)
+-.++.|++||++++|+|..|++.|.|++++++++++....+....+.. +++ .++.++++++|+++++++++|.+..
T Consensus 299 ~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~-~l~--~~~~~v~~~~f~~~~~~~~~l~~~~ 375 (385)
T 1j58_A 299 HARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQ-WLA--MLPETFVQAHLDLGKDFTDVLSKEK 375 (385)
T ss_dssp EEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHH-HHH--TSCHHHHHHHHTCCHHHHTTCCSSC
T ss_pred cEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHH-HHH--hCCHHHHHHHhCCCHHHHHhhhccC
Confidence 4457999999999999999999999999999999999877776655544 444 6899999999999999999998653
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.79 E-value=3.2e-19 Score=157.32 Aligned_cols=147 Identities=17% Similarity=0.098 Sum_probs=121.7
Q ss_pred ceeecccCCCCCCCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEE
Q 042644 36 FKSTKLRDAGDTDKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVF 115 (205)
Q Consensus 36 f~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~ 115 (205)
+.|+....+.. ... ||+++.++..++|.++ ++++.++.+.||+..++|||+ +.|++||++|++++.+++.+++.+
T Consensus 48 ~~~~~~~~~~~-~~~-~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~ 122 (385)
T 1j58_A 48 MKFSFSDTHNR-LEK-GGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKGRSF 122 (385)
T ss_dssp CEECGGGSCCE-EET-TEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTSCEE
T ss_pred eEEEcccCCcc-ccC-CcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCCcEE
Confidence 66665433332 224 8899999999999988 789999999999999999997 889999999999999998777765
Q ss_pred EEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCceee--ccccccCCCCCCHHHHHhhcCCCHHHHHHhhh
Q 042644 116 QVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVS--ISDAAFSDFDTIDDLVRKFIPFLCWTIRVSEM 190 (205)
Q Consensus 116 ~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~--~~~~~f~~~~~~~evLa~af~v~~~~v~~l~~ 190 (205)
.+.|++||++++|+|.+|++.|.+ ++++++.+|+...+.... ...++|. .++.++|+++|+++.++++++..
T Consensus 123 ~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 123 IDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLA--HTPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHH--TSCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhh--cccHHHHHHHhCCCHHHHHhccc
Confidence 679999999999999999999987 568888889887665321 1245676 78999999999999988888765
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.78 E-value=1.5e-19 Score=126.41 Aligned_cols=75 Identities=17% Similarity=0.199 Sum_probs=66.5
Q ss_pred eeecccCCCCC-CCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe
Q 042644 37 KSTKLRDAGDT-DKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ 113 (205)
Q Consensus 37 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~ 113 (205)
.|+.+.+.+.+ |.. | +++.+++.++|+|+++++|++|+++.+||+.+|||||+|+|++||++|+++++++++.++
T Consensus 3 pfnl~~~~p~~~n~~-G-~~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g~ 78 (79)
T 1dgw_X 3 PFNLRSRDPIYSNNY-G-KLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 78 (79)
T ss_dssp CEETTSSCCSEECSS-E-EEEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC--
T ss_pred ccccccCCCCccCCC-C-cEEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCCC
Confidence 36777777777 665 5 679999999999999999999999999999999999999999999999999999987653
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=2.4e-14 Score=106.57 Aligned_cols=83 Identities=24% Similarity=0.256 Sum_probs=72.1
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
++.+.++.++||+..++|||+...|++||++|++++.+ .+++ ...|++||++++|+|..|++.|.+++++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~--~~~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~ 113 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQ--GNGI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVV 113 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEEC--STTC--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEE--CCCe--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEE
Confidence 57889999999999999999877899999999999865 1344 6899999999999999999999999999999998
Q ss_pred eCCCCce
Q 042644 150 NSQNPGV 156 (205)
Q Consensus 150 ~s~~pg~ 156 (205)
....+++
T Consensus 114 ~p~~~~~ 120 (125)
T 3h8u_A 114 APGNAGF 120 (125)
T ss_dssp ESTTCCC
T ss_pred CCCcccc
Confidence 7665554
No 35
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.52 E-value=1.8e-14 Score=120.23 Aligned_cols=116 Identities=14% Similarity=0.142 Sum_probs=86.2
Q ss_pred CCCCCCCceeecccCCCCC-CCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEE
Q 042644 29 DRIFASDFKSTKLRDAGDT-DKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGF 107 (205)
Q Consensus 29 ~~~~~~df~~~~~~~~~~~-~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~ 107 (205)
+.-+.+||.+..+..+... ++. | .+...-. +...+.++++.++.++||+..++|+|++..|++||++|++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~---~~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v 79 (239)
T 2xlg_A 5 EIHTFDDIPMPKLADPLLIYTPA-N-EIFDIAS---CSAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFH 79 (239)
T ss_dssp -CCBCSCCCCCCCSSCEEEECTT-C-CEEEEEE---EEETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEE
T ss_pred cccchhhCCCccccccceeecCC-c-eEEEEec---cCCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEE
Confidence 3456777776666544433 443 3 3332211 12334578999999999999999999989999999999999976
Q ss_pred --------EeC-------CCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEE-EEEE
Q 042644 108 --------VDT-------NRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATV-FSVL 149 (205)
Q Consensus 108 --------~~~-------~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~-l~~~ 149 (205)
.+. +++.+...+++||++++|+|.+|.+.|.+++++++ +.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 80 STKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred EecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 221 12345789999999999999999999999999988 6666
No 36
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.51 E-value=1.7e-13 Score=106.68 Aligned_cols=81 Identities=16% Similarity=0.170 Sum_probs=72.1
Q ss_pred cceEEEEEEEcCCc-ccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCC-CeeEEEecCCccEEEE
Q 042644 69 LGLSVARTDLDVDG-MVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRG-LLHFGFNVGYEFATVF 146 (205)
Q Consensus 69 ~gis~~~~~l~pgg-~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G-~~H~~~N~g~~~a~~l 146 (205)
.++.+.++.++||+ ..++|||+...|++||++|++.+.+ +++ .+.|++||++++|+| ..|++.|.|+++++++
T Consensus 44 ~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~---~~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l 118 (162)
T 3l2h_A 44 RHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM---END--QYPIAPGDFVGFPCHAAAHSISNDGTETLVCL 118 (162)
T ss_dssp CSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTSCCEEEECCSSSCEEEE
T ss_pred CeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE---CCE--EEEeCCCCEEEECCCCceEEeEeCCCCCEEEE
Confidence 36899999999999 5899999888999999999999886 455 689999999999997 9999999999999999
Q ss_pred EEEeCCCC
Q 042644 147 SVLNSQNP 154 (205)
Q Consensus 147 ~~~~s~~p 154 (205)
.+.....+
T Consensus 119 ~v~~p~~~ 126 (162)
T 3l2h_A 119 VIGQRLDQ 126 (162)
T ss_dssp EEEECCSE
T ss_pred EEECCCCC
Confidence 88776543
No 37
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.50 E-value=2.6e-13 Score=96.55 Aligned_cols=79 Identities=16% Similarity=0.166 Sum_probs=70.0
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
+.++.+.++.++||+..++|+|+...|++||++|++.+.+ +++ ...+++||++++|+|..|.+.|.+++++.++.
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~ 99 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV---GEE--EALLAPGMAAFAPAGAPHGVRNESASPALLLV 99 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 4468899999999999999999777899999999999876 354 78999999999999999999999999999888
Q ss_pred EEeC
Q 042644 148 VLNS 151 (205)
Q Consensus 148 ~~~s 151 (205)
++..
T Consensus 100 v~~p 103 (105)
T 1v70_A 100 VTAP 103 (105)
T ss_dssp EEES
T ss_pred EeCC
Confidence 7653
No 38
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.48 E-value=1.8e-13 Score=97.95 Aligned_cols=77 Identities=14% Similarity=0.072 Sum_probs=67.1
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
..+.+.+++++||+..++|.|+...|++||++|++++.+. ++. ....|++||.+++|+|..|+..|.|+++++++.+
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~--~g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETP--EGS-VTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEET--TEE-EEEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeC--CCC-EEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 3688999999999999999998766799999999998762 221 2689999999999999999999999999988775
No 39
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.46 E-value=1.4e-12 Score=104.92 Aligned_cols=83 Identities=19% Similarity=0.159 Sum_probs=73.3
Q ss_pred cceEEEEEEEcCCcc------cCCccCC--CCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCC
Q 042644 69 LGLSVARTDLDVDGM------VVPHTHP--RASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGY 140 (205)
Q Consensus 69 ~gis~~~~~l~pgg~------~~pH~Hp--~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~ 140 (205)
..+.+..+.++||+. .++|+|+ +..|++||++|++.+.+.+..++.....+++||++++|+|..|++.|.|+
T Consensus 65 ~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~ 144 (190)
T 1x82_A 65 GDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGD 144 (190)
T ss_dssp TCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSS
T ss_pred CCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCc
Confidence 368888889999998 8899997 35799999999999998775566677999999999999999999999999
Q ss_pred ccEEEEEEEeC
Q 042644 141 EFATVFSVLNS 151 (205)
Q Consensus 141 ~~a~~l~~~~s 151 (205)
+++++++++..
T Consensus 145 ~~~~~l~v~~~ 155 (190)
T 1x82_A 145 EPFIFLAIYPA 155 (190)
T ss_dssp SCEEEEEEEET
T ss_pred ccEEEEEEECC
Confidence 99999887754
No 40
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.46 E-value=8e-13 Score=103.08 Aligned_cols=85 Identities=15% Similarity=0.099 Sum_probs=71.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCC----CeEEEEEEcCCCEEEeCCCCeeEEEecC-CccEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTN----RQVFQVMLKAGEVCVFPRGLLHFGFNVG-YEFAT 144 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~----~~~~~~~l~~GDv~~vP~G~~H~~~N~g-~~~a~ 144 (205)
.+.+.++.++||+..++|+| ...|++||++|++++.+.+.+ ++.....+++||++++|+|..|++.|.+ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H-~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRH-SCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEE-SSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeEC-CCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 68899999999999999999 568999999999999875421 1123789999999999999999999999 89999
Q ss_pred EEEEEeCCCCc
Q 042644 145 VFSVLNSQNPG 155 (205)
Q Consensus 145 ~l~~~~s~~pg 155 (205)
+++++......
T Consensus 119 ~l~i~~~~~~~ 129 (163)
T 1lr5_A 119 VLVIISRPPAK 129 (163)
T ss_dssp EEEEEESSSCC
T ss_pred EEEEECCCCcc
Confidence 99887654433
No 41
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.46 E-value=2.4e-12 Score=101.43 Aligned_cols=117 Identities=10% Similarity=0.144 Sum_probs=86.0
Q ss_pred CCCCCCCceeecccCC---CCCCCCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEE
Q 042644 29 DRIFASDFKSTKLRDA---GDTDKFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIA 105 (205)
Q Consensus 29 ~~~~~~df~~~~~~~~---~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v 105 (205)
..+.++++....+... .....+.|.....+..... +....++.+.++.++||+..++|||+ ..|++||++|++.+
T Consensus 12 ~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~ 89 (167)
T 3ibm_A 12 RVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEV 89 (167)
T ss_dssp EEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEE
T ss_pred ceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEE
Confidence 3455666666654321 1111122555555544332 22344789999999999999999995 78999999999998
Q ss_pred EEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecC-CccEEEEEEEeCC
Q 042644 106 GFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVG-YEFATVFSVLNSQ 152 (205)
Q Consensus 106 ~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g-~~~a~~l~~~~s~ 152 (205)
.+ +++ .+.|++||++++|+|..|++.|.+ ++++.+++++...
T Consensus 90 ~i---~~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 90 VL---DDR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EE---TTE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EE---CCE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 86 455 789999999999999999999999 9999999887654
No 42
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.45 E-value=8.1e-13 Score=103.68 Aligned_cols=84 Identities=19% Similarity=0.183 Sum_probs=73.1
Q ss_pred CccceEEEEEEEcCCccc-CCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCC--CeeEEEecCCccE
Q 042644 67 NTLGLSVARTDLDVDGMV-VPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRG--LLHFGFNVGYEFA 143 (205)
Q Consensus 67 ~~~gis~~~~~l~pgg~~-~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G--~~H~~~N~g~~~a 143 (205)
....+.+.+++++||+.. ++|||+...|++||++|++++.+ +++ .+.|++||++++|+| ..|.+.|.+++++
T Consensus 39 ~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~---~~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~ 113 (163)
T 3i7d_A 39 GLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD---DQG--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPA 113 (163)
T ss_dssp TCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTCCCCBEEECCSSSCE
T ss_pred CCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE---CCE--EEEeCCCCEEEECCCCCcceEEEECCCCCE
Confidence 334789999999999965 89999776899999999999886 455 799999999999999 9999999999999
Q ss_pred EEEEEEeCCCCc
Q 042644 144 TVFSVLNSQNPG 155 (205)
Q Consensus 144 ~~l~~~~s~~pg 155 (205)
+++.+.......
T Consensus 114 ~~l~v~~p~~~d 125 (163)
T 3i7d_A 114 TFLVVGTRTPTE 125 (163)
T ss_dssp EEEEEEECCSCE
T ss_pred EEEEEECCCCCC
Confidence 999988765543
No 43
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.45 E-value=1e-12 Score=95.02 Aligned_cols=79 Identities=20% Similarity=0.145 Sum_probs=69.9
Q ss_pred ccceEEEEEEEcCCcccCCc--cCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPH--THPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATV 145 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH--~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~ 145 (205)
..++.+.++.++||+..++| +|++..|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+++++++
T Consensus 18 ~~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~ 92 (113)
T 2gu9_A 18 LRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV---DGH--TQALQAGSLIAIERGQAHEIRNTGDTPLKT 92 (113)
T ss_dssp ETTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE---TTE--EEEECTTEEEEECTTCCEEEECCSSSCEEE
T ss_pred CCcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEE
Confidence 34688999999999998888 99768899999999999886 455 689999999999999999999999999998
Q ss_pred EEEEeC
Q 042644 146 FSVLNS 151 (205)
Q Consensus 146 l~~~~s 151 (205)
+.++..
T Consensus 93 ~~v~~~ 98 (113)
T 2gu9_A 93 VNFYHP 98 (113)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 887754
No 44
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.45 E-value=1e-12 Score=101.07 Aligned_cols=84 Identities=19% Similarity=0.193 Sum_probs=70.9
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
..+.+.++.+.||+..++|||+...|++||++|++++.+.+.... .++..|++||++++|+|..|++.|.+++++.+++
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~ 120 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYS 120 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEE
Confidence 357888999999999999999877799999999999987543211 1348999999999999999999999999998888
Q ss_pred EEeCC
Q 042644 148 VLNSQ 152 (205)
Q Consensus 148 ~~~s~ 152 (205)
++...
T Consensus 121 i~~~~ 125 (148)
T 2oa2_A 121 IYAPP 125 (148)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 76543
No 45
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.43 E-value=9.6e-14 Score=100.41 Aligned_cols=80 Identities=15% Similarity=0.039 Sum_probs=69.0
Q ss_pred CccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 67 NTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 67 ~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
....+.+.|++++||+..++|+|+...|++||++|++++.. .++......+++||.+++|+|..|.+.|.|++|+++|
T Consensus 13 en~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~--~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~I 90 (98)
T 3lag_A 13 DNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFL 90 (98)
T ss_dssp ESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEE
T ss_pred cCCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe--CCCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEE
Confidence 34478999999999999999999988899999999998764 3444445779999999999999999999999999998
Q ss_pred EE
Q 042644 147 SV 148 (205)
Q Consensus 147 ~~ 148 (205)
.+
T Consensus 91 eV 92 (98)
T 3lag_A 91 EI 92 (98)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 46
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.41 E-value=1.1e-12 Score=99.36 Aligned_cols=85 Identities=19% Similarity=0.233 Sum_probs=72.2
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
...+.+.++.++||+..++|+|+ ..|++||++|++++.+.. +++ ...+++||++++|+|..|.+.|.+++++.++.
T Consensus 36 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~-~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~ 111 (145)
T 3ht1_A 36 ADRFVLTEFEVSPNGSTPPHFHE-WEHEIYVLEGSMGLVLPD-QGR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLV 111 (145)
T ss_dssp CCSEEEEEEEEEEEEECCCEECS-SCEEEEEEEECEEEEEGG-GTE--EEEECTTCEEEECTTCCBEEECCTTCCEEEEE
T ss_pred CCcEEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEeE-CCE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEE
Confidence 34789999999999999999996 568889999999987211 344 78999999999999999999999999999998
Q ss_pred EEeCCCCce
Q 042644 148 VLNSQNPGV 156 (205)
Q Consensus 148 ~~~s~~pg~ 156 (205)
++....+..
T Consensus 112 i~~~~~~~~ 120 (145)
T 3ht1_A 112 VAPCERPPV 120 (145)
T ss_dssp EEESCCCCC
T ss_pred EECCCCCCe
Confidence 887665543
No 47
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.40 E-value=2.1e-12 Score=97.65 Aligned_cols=77 Identities=26% Similarity=0.275 Sum_probs=68.2
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
+..+.+.++.++||+..++|+|++..|++||++|++++.+ +++ .+.|++||++++|+|..|++.|.+++++++++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~ 128 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD---NGK--DVPIKAGDVCFTDSGESHSIENTGNTDLEFLA 128 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE---TTE--EEEEETTEEEEECTTCEEEEECCSSSCEEEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEE---CCE--EEEeCCCcEEEECCCCcEEeEECCCCCEEEEE
Confidence 4457888999999999999999767899999999999876 455 78999999999999999999999999998887
Q ss_pred EE
Q 042644 148 VL 149 (205)
Q Consensus 148 ~~ 149 (205)
+.
T Consensus 129 v~ 130 (133)
T 1o4t_A 129 VI 130 (133)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 48
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.40 E-value=1.9e-12 Score=96.12 Aligned_cols=77 Identities=14% Similarity=0.261 Sum_probs=68.0
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
.++.+.++.++||+..++|+|+. .|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.++ ++.++.+
T Consensus 39 ~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v 111 (126)
T 4e2g_A 39 KNLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTI---GEE--TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDI 111 (126)
T ss_dssp SSCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEE---TTE--EEEECTTEEEEECTTCCEEEECCTT-CEEEEEE
T ss_pred CCeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEE
Confidence 36899999999999999999974 899999999999886 455 6899999999999999999999987 7888887
Q ss_pred EeCC
Q 042644 149 LNSQ 152 (205)
Q Consensus 149 ~~s~ 152 (205)
+...
T Consensus 112 ~~p~ 115 (126)
T 4e2g_A 112 FSPP 115 (126)
T ss_dssp EESC
T ss_pred ECCC
Confidence 7643
No 49
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.39 E-value=2.7e-12 Score=100.31 Aligned_cols=79 Identities=13% Similarity=0.106 Sum_probs=70.8
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
..+.+.++.++||+..++|||+ ..|++||++|++++.+ +++ .+.+++||++++|+|..|.+.|.+++++.++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v---~g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i 115 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLV---GET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCV 115 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4788999999999999999996 5799999999999886 455 789999999999999999999999999999988
Q ss_pred EeCCC
Q 042644 149 LNSQN 153 (205)
Q Consensus 149 ~~s~~ 153 (205)
++...
T Consensus 116 ~~~~~ 120 (156)
T 3kgz_A 116 VNAAR 120 (156)
T ss_dssp EESSC
T ss_pred EeCCC
Confidence 86543
No 50
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.39 E-value=1.3e-12 Score=103.83 Aligned_cols=80 Identities=14% Similarity=0.107 Sum_probs=71.5
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
.|..+.+++++||+..++|.| ...|++||++|++++.+. +++ ++.|++||.+ +|+|..|.+.|.|+++++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H-~~eE~~~VLeGel~l~ld--~ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRT-NSIDYGIVLEGEIELELD--DGA--KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCC-SEEEEEEEEESCEEEECG--GGC--EEEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred CCeEEEEEEECCCCCCCCeec-CceEEEEEEeCEEEEEEC--CCe--EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 488999999999999999999 467999999999999863 144 6899999999 9999999999999999999999
Q ss_pred EeCCCC
Q 042644 149 LNSQNP 154 (205)
Q Consensus 149 ~~s~~p 154 (205)
+....|
T Consensus 151 ~~P~~p 156 (172)
T 3es1_A 151 LIEAPA 156 (172)
T ss_dssp EEECCC
T ss_pred EcCCCc
Confidence 987766
No 51
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.39 E-value=1.1e-11 Score=97.68 Aligned_cols=78 Identities=14% Similarity=0.089 Sum_probs=70.0
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
.++.+.++++.||+..++|||+ ..|++||++|++.+.+ +++ .+.+++||++++|+|..|.+.|.+++++.++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~v---~g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i 124 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQ-HAHGVMILKGRGHAMV---GRA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCM 124 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4788999999999999999996 5799999999999876 455 789999999999999999999999999999988
Q ss_pred EeCC
Q 042644 149 LNSQ 152 (205)
Q Consensus 149 ~~s~ 152 (205)
....
T Consensus 125 ~~~~ 128 (166)
T 3jzv_A 125 VNAE 128 (166)
T ss_dssp EESS
T ss_pred EccC
Confidence 7653
No 52
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.37 E-value=3e-12 Score=94.52 Aligned_cols=76 Identities=22% Similarity=0.182 Sum_probs=64.7
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
+.++.+.++.++||+..++|||+. .|++||++|++++.+ +++ .+.|++||.+++|+|..|.+.|.++..+.++.
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~ 106 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGV---DGA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTV 106 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEE---TTE--EEEECTTEEEEECTTCCEEEEESSSEEEEEEE
T ss_pred CCCEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEeCCCcEEEEEE
Confidence 447899999999999999999965 699999999999886 455 68999999999999999999998765554444
Q ss_pred EE
Q 042644 148 VL 149 (205)
Q Consensus 148 ~~ 149 (205)
++
T Consensus 107 v~ 108 (114)
T 3fjs_A 107 VL 108 (114)
T ss_dssp EC
T ss_pred Ee
Confidence 33
No 53
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.36 E-value=9.1e-12 Score=99.58 Aligned_cols=83 Identities=19% Similarity=0.167 Sum_probs=69.1
Q ss_pred CCCccceEEEEEEEcCCcccC---CccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEec-CC
Q 042644 65 GLNTLGLSVARTDLDVDGMVV---PHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNV-GY 140 (205)
Q Consensus 65 ~l~~~gis~~~~~l~pgg~~~---pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~-g~ 140 (205)
...+..+.+.+++++||+..+ +|+|+. .|++||++|++.+.+.+ ++....+.|++||.+++|++.+|++.|. ++
T Consensus 111 ~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~~~-~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~ 188 (198)
T 2bnm_A 111 TKRAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKWGD-KENPKEALLPTGASMFVEEHVPHAFTAAKGT 188 (198)
T ss_dssp CTTSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEESC-TTSCEEEEECTTCEEEECTTCCEEEEESTTS
T ss_pred CCCCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEECC-cCCcccEEECCCCEEEeCCCCceEEEecCCC
Confidence 344557899999999999876 799965 89999999999998732 1112378999999999999999999999 99
Q ss_pred ccEEEEEEE
Q 042644 141 EFATVFSVL 149 (205)
Q Consensus 141 ~~a~~l~~~ 149 (205)
+++++++++
T Consensus 189 ~~~~~l~v~ 197 (198)
T 2bnm_A 189 GSAKLIAVN 197 (198)
T ss_dssp CCEEEEEEE
T ss_pred CCeEEEEEe
Confidence 999988765
No 54
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.36 E-value=1.1e-11 Score=95.40 Aligned_cols=78 Identities=18% Similarity=0.222 Sum_probs=69.2
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEE-EEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQ-VMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~-~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
..++.+.++.++||+..++|+|+. .|++||++|++++.+ +++ . ..+++||++++|+|..|++.|.+++++.++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~---~~~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l 118 (147)
T 2f4p_A 45 VFNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQE---RGK--PARILKKGDVVEIPPNVVHWHGAAPDEELVHI 118 (147)
T ss_dssp SSSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEE---TTS--CCEEEETTCEEEECTTCCEEEEEBTTBCEEEE
T ss_pred CCcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEE---CCE--EEEEECCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 347899999999999999999965 899999999999886 344 4 799999999999999999999999999988
Q ss_pred EEEeC
Q 042644 147 SVLNS 151 (205)
Q Consensus 147 ~~~~s 151 (205)
+++..
T Consensus 119 ~v~~~ 123 (147)
T 2f4p_A 119 GISTQ 123 (147)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 87754
No 55
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.36 E-value=5.9e-12 Score=92.52 Aligned_cols=74 Identities=16% Similarity=0.201 Sum_probs=65.3
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEE-EEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQV-MLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~-~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
++.+.++.+.||+..++||| ...|++||++|++++.+ +++ .. .+++||++++|+|..|++.|.+++++.++.+
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H-~~~e~~~Vl~G~~~~~i---~~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i 99 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYS-NSYVHLIIIKGEMTLTL---EDQ--EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVV 99 (117)
T ss_dssp SCEEEEEEEETTCBCCCEEC-SSCEEEEEEESEEEEEE---TTS--CCEEEETTCEEEECTTCEEEEECCSSSEEEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeC-CCcEEEEEEeCEEEEEE---CCE--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 57888899999999999999 57899999999999886 344 46 9999999999999999999999988888776
Q ss_pred E
Q 042644 149 L 149 (205)
Q Consensus 149 ~ 149 (205)
.
T Consensus 100 ~ 100 (117)
T 2b8m_A 100 K 100 (117)
T ss_dssp E
T ss_pred E
Confidence 3
No 56
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.36 E-value=9.6e-12 Score=92.55 Aligned_cols=75 Identities=17% Similarity=0.247 Sum_probs=67.1
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
..+.+....++||...++||| +..|++||++|++++.+ +++ .+.+++||++++|+|..|.+.|.+++++.++++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H-~~~Ei~~v~~G~~~~~i---~~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSH-NEYELFIVIQGNAIIRI---NDE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI 105 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCC-SSEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCccCCEec-CCeEEEEEEeCEEEEEE---CCE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 468889999999999999999 68999999999999887 455 789999999999999999999999998887765
Q ss_pred E
Q 042644 149 L 149 (205)
Q Consensus 149 ~ 149 (205)
.
T Consensus 106 ~ 106 (128)
T 4i4a_A 106 W 106 (128)
T ss_dssp E
T ss_pred E
Confidence 3
No 57
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.35 E-value=8.4e-12 Score=91.20 Aligned_cols=76 Identities=16% Similarity=0.163 Sum_probs=66.3
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
++.+.++.++||...++|+|+ ..|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+ ++.++.++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~ 104 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNV---DGV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTF 104 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEE---CCE--EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEE
Confidence 588999999999999999996 7899999999999886 455 689999999999999999999986 67777777
Q ss_pred eCCC
Q 042644 150 NSQN 153 (205)
Q Consensus 150 ~s~~ 153 (205)
....
T Consensus 105 ~p~~ 108 (116)
T 2pfw_A 105 SPAR 108 (116)
T ss_dssp ESCC
T ss_pred CCch
Confidence 6543
No 58
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.34 E-value=4.3e-12 Score=94.41 Aligned_cols=79 Identities=14% Similarity=0.100 Sum_probs=66.3
Q ss_pred ccceEEEEEEEcCCcccC-CccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 68 TLGLSVARTDLDVDGMVV-PHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~-pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
..++.+.++.++||+..+ +|+|+...+++||++|++.+.+ +++ .+.+++||++++|+|..|.+.|.+++++.++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~ 97 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI---DGE--KIELQAGDWLRIAPDGKRQISAASDSPIGFL 97 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE---TTE--EEEEETTEEEEECTTCCEEEEEBTTBCEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEEEcCCCCCEEEE
Confidence 457888889999999888 8999654445559999999886 455 6899999999999999999999998999887
Q ss_pred EEEeC
Q 042644 147 SVLNS 151 (205)
Q Consensus 147 ~~~~s 151 (205)
++...
T Consensus 98 ~i~~~ 102 (125)
T 3cew_A 98 CIQVK 102 (125)
T ss_dssp EEEEE
T ss_pred EEEcC
Confidence 76543
No 59
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.34 E-value=1.5e-12 Score=94.24 Aligned_cols=79 Identities=15% Similarity=0.030 Sum_probs=65.4
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
...+.+.+++|+||+..++|.|+...+++|+++|++++.. .+++.....+++||++++|+|..|+..|.|++++++++
T Consensus 14 ~~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~--~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~ 91 (98)
T 2ozi_A 14 NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEE
T ss_pred CCcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEe--CCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEE
Confidence 3478999999999999999999866566667788887653 34543357899999999999999999999999999988
Q ss_pred E
Q 042644 148 V 148 (205)
Q Consensus 148 ~ 148 (205)
+
T Consensus 92 v 92 (98)
T 2ozi_A 92 I 92 (98)
T ss_dssp E
T ss_pred E
Confidence 6
No 60
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.33 E-value=5.5e-12 Score=94.34 Aligned_cols=77 Identities=14% Similarity=0.157 Sum_probs=68.4
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
..++.+.++.++||+..++|+|+ ..|++||++|++++.+ +++ ...+++||++++|+|..|.+.|.+++++.+++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~ 118 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLK---EQG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLC 118 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEEC---SSC--EEEEETTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEE---CCE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 45789999999999999999996 7899999999999876 344 68999999999999999999999999998887
Q ss_pred EEe
Q 042644 148 VLN 150 (205)
Q Consensus 148 ~~~ 150 (205)
++.
T Consensus 119 v~~ 121 (126)
T 1vj2_A 119 LIP 121 (126)
T ss_dssp EEE
T ss_pred EEc
Confidence 654
No 61
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.33 E-value=9.6e-12 Score=93.47 Aligned_cols=78 Identities=22% Similarity=0.302 Sum_probs=59.8
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC-eEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE
Q 042644 71 LSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR-QVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 71 is~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
+.+.++.++||+..++|+|+...|++||++|++++.+ ++ + ...+++||++++|+|..|.+.|.+++ +.++.++
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~---~~~~--~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~~ 116 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEY---EDIG--AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEIV 116 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEE---TTTE--EEEEETTCEEECCTTCCEEEEEECTT-CEEEEEE
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEE---CCcE--EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEEE
Confidence 4566666778999999999776999999999999886 34 4 78999999999999999999998774 5777666
Q ss_pred eCCCC
Q 042644 150 NSQNP 154 (205)
Q Consensus 150 ~s~~p 154 (205)
.....
T Consensus 117 ~p~~~ 121 (134)
T 2o8q_A 117 SPAGF 121 (134)
T ss_dssp SSTTC
T ss_pred CCCch
Confidence 55443
No 62
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.30 E-value=1e-11 Score=104.03 Aligned_cols=78 Identities=10% Similarity=0.111 Sum_probs=67.3
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCC-ccEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGY-EFATVF 146 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~-~~a~~l 146 (205)
...+.+.+++++||+..+.|+|+...|++||++|++++.+ +++ ++.|++||++++|+|..|++.|.|+ ++++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i---~~~--~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNL---DNN--WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEES---SSC--EEEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 4468899999999999999999878899999999999876 455 6899999999999999999999999 999988
Q ss_pred EEEe
Q 042644 147 SVLN 150 (205)
Q Consensus 147 ~~~~ 150 (205)
.+.+
T Consensus 251 ~~~d 254 (261)
T 1rc6_A 251 YSKD 254 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7765
No 63
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.28 E-value=1.8e-11 Score=96.58 Aligned_cols=75 Identities=17% Similarity=0.095 Sum_probs=65.5
Q ss_pred ceEEEEEEEcC-CcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 70 GLSVARTDLDV-DGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 70 gis~~~~~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
-+...+++++| |+...+|.|....|++||++|++.+.+ +++ .+.|++||.+++|+|..|.+.|.++++++++.+
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl---~g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV---CKN--KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE---CCE--EEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 47788899999 777666666688999999999999987 455 789999999999999999999999999988876
Q ss_pred E
Q 042644 149 L 149 (205)
Q Consensus 149 ~ 149 (205)
.
T Consensus 162 q 162 (166)
T 2vpv_A 162 Q 162 (166)
T ss_dssp E
T ss_pred E
Confidence 3
No 64
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.28 E-value=4.7e-11 Score=87.03 Aligned_cols=73 Identities=19% Similarity=0.343 Sum_probs=62.8
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
.++.+.++.+.||+..++|+|+ ..|++||++|++.+.+ +++ ...+++||++++|+|..|.+.|.+ ++.++.+
T Consensus 38 ~~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~~v 109 (115)
T 1yhf_A 38 QDLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITI---DQE--TYRVAEGQTIVMPAGIPHALYAVE--AFQMLLV 109 (115)
T ss_dssp TTEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTSCEEEEESS--CEEEEEE
T ss_pred CceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEECC--CceEEEE
Confidence 3678899999999999999996 6899999999999876 455 689999999999999999999986 4666554
Q ss_pred E
Q 042644 149 L 149 (205)
Q Consensus 149 ~ 149 (205)
+
T Consensus 110 ~ 110 (115)
T 1yhf_A 110 V 110 (115)
T ss_dssp E
T ss_pred E
Confidence 4
No 65
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.27 E-value=2.7e-11 Score=96.54 Aligned_cols=78 Identities=21% Similarity=0.175 Sum_probs=66.2
Q ss_pred CccceEEEEEEEcCCcccC--CccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEE
Q 042644 67 NTLGLSVARTDLDVDGMVV--PHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFAT 144 (205)
Q Consensus 67 ~~~gis~~~~~l~pgg~~~--pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~ 144 (205)
....+.+.+++++||+..+ +|+| ...|++||++|++.+.+ +++ .+.|++||++++|+|.+|++.|.+++++
T Consensus 100 ~~~~~~~~~~~~~pg~~~~~~~H~h-~~~E~~~Vl~G~~~~~~---~~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~- 172 (192)
T 1y9q_A 100 ADTGLEIFEITLLDHHQQMSSPHAL-GVIEYIHVLEGIMKVFF---DEQ--WHELQQGEHIRFFSDQPHGYAAVTEKAV- 172 (192)
T ss_dssp TTTTEEEEEEEECTTCEEEECCCST-TCEEEEEEEESCEEEEE---TTE--EEEECTTCEEEEECSSSEEEEESSSCEE-
T ss_pred CCCcEEEEEEEECCCCCccCCCCCC-CCEEEEEEEEeEEEEEE---CCE--EEEeCCCCEEEEcCCCCeEeECCCCCcE-
Confidence 3457899999999999765 6777 46799999999999886 455 6899999999999999999999999999
Q ss_pred EEEEEeC
Q 042644 145 VFSVLNS 151 (205)
Q Consensus 145 ~l~~~~s 151 (205)
+++++..
T Consensus 173 ~l~v~~~ 179 (192)
T 1y9q_A 173 FQNIVAY 179 (192)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 7766543
No 66
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.24 E-value=8e-11 Score=103.17 Aligned_cols=89 Identities=10% Similarity=-0.029 Sum_probs=73.8
Q ss_pred CeeEEEeccC-CCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCC
Q 042644 52 YSSLTLVTAA-DFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRG 130 (205)
Q Consensus 52 g~~~~~~~~~-~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G 130 (205)
|+.+..++.. ..+.+.+ +++....|+||+..++|||+.+ |++||++|++++.+ +++ +..+++||+++||++
T Consensus 250 G~~~~~~np~t~~~~~~t--i~~~~~~l~pG~~~~~H~h~~~-ev~~v~~G~g~~~v---~~~--~~~~~~GD~~~vP~~ 321 (354)
T 2d40_A 250 GYKMRYVNPVTGGYPMPS--MGAFLQLLPKGFASRVARTTDS-TIYHVVEGSGQVII---GNE--TFSFSAKDIFVVPTW 321 (354)
T ss_dssp BEEEEECCTTTSSCSSSS--CEEEEEEECTTCBCCCBEESSC-EEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTT
T ss_pred CeEEEEeCCCcCCCCCCc--ceeEEEEECCCCCCCceecCCc-EEEEEEeCeEEEEE---CCE--EEEEcCCCEEEECCC
Confidence 7778877743 5666664 5566778999999999999776 99999999999987 455 799999999999999
Q ss_pred CeeEEEecCCccEEEEEEEe
Q 042644 131 LLHFGFNVGYEFATVFSVLN 150 (205)
Q Consensus 131 ~~H~~~N~g~~~a~~l~~~~ 150 (205)
..|.+.|. +++.++++.+
T Consensus 322 ~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 322 HGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp CCEEEEEE--EEEEEEEEES
T ss_pred CeEEEEeC--CCEEEEEEcC
Confidence 99999994 7788777644
No 67
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.24 E-value=5.2e-11 Score=85.76 Aligned_cols=77 Identities=16% Similarity=0.087 Sum_probs=63.1
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeE-EEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEM-LFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei-~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
+.++.+.++.+.||...++|+|+...|+ +||++|++++.+. +++ ...+++||++++|+|..|++.|.++ +.++
T Consensus 30 ~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~--~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l 103 (110)
T 2q30_A 30 SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGD--GDA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVL 103 (110)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECG--GGC--EEEECTTEEEEEETTSCEEEEESSS--EEEE
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeC--CCE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEE
Confidence 3467889999999999999999755788 8999999998762 134 6899999999999999999999765 4555
Q ss_pred EEEe
Q 042644 147 SVLN 150 (205)
Q Consensus 147 ~~~~ 150 (205)
.++.
T Consensus 104 ~~~~ 107 (110)
T 2q30_A 104 VTIA 107 (110)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5554
No 68
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.23 E-value=5e-11 Score=98.93 Aligned_cols=79 Identities=11% Similarity=0.031 Sum_probs=68.8
Q ss_pred ceEEEEEEEcC-CcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 70 GLSVARTDLDV-DGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 70 gis~~~~~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
-+.+..+.++| |+..++|||+ ..|++||++|++++.+ +++ ...|++||.+++|+|..|.++|.|+++++++.+
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~-~~e~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 217 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHR-NEQIGICIGGGYDMTV---EGC--TVEMKFGTAYFCEPREDHGAINRSEKESKSINI 217 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCS-SEEEEEECSSCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCC-CcEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 35677888999 8889999996 4799999999999886 455 688999999999999999999999999999998
Q ss_pred EeCCCC
Q 042644 149 LNSQNP 154 (205)
Q Consensus 149 ~~s~~p 154 (205)
+.....
T Consensus 218 ~~p~~~ 223 (243)
T 3h7j_A 218 FFPPRY 223 (243)
T ss_dssp EESCSS
T ss_pred EcCChh
Confidence 875443
No 69
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.22 E-value=1.8e-10 Score=97.21 Aligned_cols=76 Identities=9% Similarity=0.121 Sum_probs=67.8
Q ss_pred cceEEEEEEEcCCcccCC-ccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCC-ccEEEE
Q 042644 69 LGLSVARTDLDVDGMVVP-HTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGY-EFATVF 146 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~-~~a~~l 146 (205)
..+.+.+++++||+..+. |+|+ ..|++||++|++++.+ +++ .+.|++||++++|++.+|+++|.++ ++++++
T Consensus 180 ~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i---~~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l 253 (274)
T 1sef_A 180 FDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNL---DNE--WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYV 253 (274)
T ss_dssp CSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEECSSSCEEEE
T ss_pred CCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeCCCCCCEEEE
Confidence 478899999999999888 9994 6799999999999987 455 7899999999999999999999999 999888
Q ss_pred EEEe
Q 042644 147 SVLN 150 (205)
Q Consensus 147 ~~~~ 150 (205)
+..+
T Consensus 254 ~~~~ 257 (274)
T 1sef_A 254 YSKD 257 (274)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7754
No 70
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.21 E-value=9.3e-11 Score=100.65 Aligned_cols=79 Identities=15% Similarity=0.113 Sum_probs=69.7
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
..+++..+.+.||+..++|||++..|++||++|++++.+ +++ ...|++||++++|+|.+|.+.|.++ +++++.+
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~---~~~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~ 117 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL---DGE--RYLLISGDYANIPAGTPHSYRMQSH-RTRLVSY 117 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECST-TEEEEEE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEECCC-CeEEEEE
Confidence 368999999999999999999768999999999999986 455 6899999999999999999999987 6888888
Q ss_pred EeCCC
Q 042644 149 LNSQN 153 (205)
Q Consensus 149 ~~s~~ 153 (205)
++...
T Consensus 118 ~~p~~ 122 (337)
T 1y3t_A 118 TMKGN 122 (337)
T ss_dssp EETTS
T ss_pred ECCCC
Confidence 76554
No 71
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=99.21 E-value=1.6e-10 Score=82.64 Aligned_cols=78 Identities=8% Similarity=-0.007 Sum_probs=67.3
Q ss_pred eEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCC-CCceeeccc---cccCCCCCCHHHHHhhcCCCHHHHHHh
Q 042644 113 QVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQ-NPGVVSISD---AAFSDFDTIDDLVRKFIPFLCWTIRVS 188 (205)
Q Consensus 113 ~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~-~pg~~~~~~---~~f~~~~~~~evLa~af~v~~~~v~~l 188 (205)
+.++.+|++||+++||+|.+-...+.+ .+.++++-++. ++..+.+++ +++. .+|.++|+.||+++++++++|
T Consensus 4 ~~~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~--~l~~evla~aF~~s~ee~~~l 79 (93)
T 1dgw_Y 4 RRYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIR--QIPRQVSDLTFPGSGEEVEEL 79 (93)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTT--TSCHHHHHHHSSSCTHHHHHH
T ss_pred chhhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHH--hCCHHHHHHHcCCCHHHHHHH
Confidence 345789999999999999999998864 49998885555 888888865 8888 899999999999999999999
Q ss_pred hhcCCC
Q 042644 189 EMSHFQ 194 (205)
Q Consensus 189 ~~~~~~ 194 (205)
+.++++
T Consensus 80 ~~~q~e 85 (93)
T 1dgw_Y 80 LENQKE 85 (93)
T ss_dssp TTSCCC
T ss_pred HhcCCC
Confidence 988754
No 72
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.19 E-value=2.8e-10 Score=83.06 Aligned_cols=72 Identities=11% Similarity=0.164 Sum_probs=60.7
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
.+.+..+.+.||...++|+|+ ..|++||++|++.+.+ +++ .+.|++||++++|+|.+|.+.|. +++.++.+.
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i~ 108 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITF---DDQ--KIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQIT 108 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECTTCCBEEEEE--EEEEEEEEE
T ss_pred CceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEE---CCE--EEEecCCCEEEECCCCcEEEEeC--CCcEEEEEE
Confidence 466777788999999999995 6899999999999886 455 78999999999999999999986 466666544
No 73
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.18 E-value=1.8e-10 Score=85.98 Aligned_cols=74 Identities=14% Similarity=0.106 Sum_probs=62.0
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
..+++..+.++||+..+.| ....|++||++|++++.+ +++ ...|++||+++||+|..|++.|.+ ++++++.+
T Consensus 38 ~~~~~~~~~~~pG~~~~~H--~~~~E~~~Vl~G~~~~~~---~g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~v 109 (119)
T 3lwc_A 38 GPITIGYGRYAPGQSLTET--MAVDDVMIVLEGRLSVST---DGE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTAYV 109 (119)
T ss_dssp CCCEEEEEEECTTCEEEEE--CSSEEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEEEE
T ss_pred CCEEEEEEEECCCCCcCcc--CCCCEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEEEE
Confidence 3688999999999876555 477899999999999987 455 689999999999999999998875 67777766
Q ss_pred Ee
Q 042644 149 LN 150 (205)
Q Consensus 149 ~~ 150 (205)
..
T Consensus 110 ~~ 111 (119)
T 3lwc_A 110 TY 111 (119)
T ss_dssp EE
T ss_pred EC
Confidence 65
No 74
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.18 E-value=5.2e-11 Score=104.38 Aligned_cols=78 Identities=18% Similarity=0.137 Sum_probs=68.4
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
..+.+....++||+..++|+|+ ..|++||++|++.+..+ +++ .+.+++||++++|+|.+|.+.|.|+++++++.+
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v--~g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v 172 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAV--DGE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDG 172 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEE--TTE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEE--CCE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 3678999999999999999995 67999999999988444 354 689999999999999999999999999999887
Q ss_pred EeC
Q 042644 149 LNS 151 (205)
Q Consensus 149 ~~s 151 (205)
.+.
T Consensus 173 ~d~ 175 (354)
T 2d40_A 173 LDL 175 (354)
T ss_dssp ECH
T ss_pred ECc
Confidence 653
No 75
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.15 E-value=2.6e-10 Score=99.62 Aligned_cols=82 Identities=16% Similarity=0.145 Sum_probs=65.5
Q ss_pred ceEEEEEEEcCCc-ccC--CccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 70 GLSVARTDLDVDG-MVV--PHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 70 gis~~~~~l~pgg-~~~--pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
.+++. ..+.|++ ..+ +|||++..|++||++|++++.+.+.+++...+.|++||++++|+|.+|++.|.++++ +++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l 124 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMT 124 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEE
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEE
Confidence 46666 4555655 455 899987899999999999999876444444799999999999999999999998876 777
Q ss_pred EEEeCCC
Q 042644 147 SVLNSQN 153 (205)
Q Consensus 147 ~~~~s~~ 153 (205)
.++....
T Consensus 125 ~v~~p~~ 131 (350)
T 1juh_A 125 GVIVPGG 131 (350)
T ss_dssp EEEESSC
T ss_pred EEEcCcc
Confidence 7776543
No 76
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.15 E-value=6e-10 Score=92.71 Aligned_cols=78 Identities=9% Similarity=0.114 Sum_probs=68.9
Q ss_pred ccceEEEEEEEcCCcccCC-ccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVP-HTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
+..+.+..++++||+..+. |.| ...|.+||++|++.+.+ +++ ++.|++||+++++++..|+++|.|+++++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h-~~ee~~~vLeG~~~~~~---~~~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVH-YMEHGLLMLEGEGLYKL---EEN--YYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCC-SSCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred CCCeEEEEEEECCCCccCcccCC-CceEEEEEEECEEEEEE---CCE--EEEcCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 4578999999999998886 556 67899999999999886 565 7899999999999999999999999999998
Q ss_pred EEEeC
Q 042644 147 SVLNS 151 (205)
Q Consensus 147 ~~~~s 151 (205)
.+-+-
T Consensus 236 ~~kd~ 240 (246)
T 1sfn_A 236 LYKDM 240 (246)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 87764
No 77
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.14 E-value=6.5e-10 Score=95.34 Aligned_cols=76 Identities=16% Similarity=0.198 Sum_probs=63.6
Q ss_pred EEEEEEcC-CcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeC
Q 042644 73 VARTDLDV-DGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNS 151 (205)
Q Consensus 73 ~~~~~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s 151 (205)
...+.+.| |...++|||+...|++||++|++++.+ +++ ++.|++||++++|++..|++.|.++ ++.++.+++.
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i---~~~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWT---DGQ--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 34455655 567789999778999999999999987 455 7899999999999999999999988 8999888866
Q ss_pred CCC
Q 042644 152 QNP 154 (205)
Q Consensus 152 ~~p 154 (205)
...
T Consensus 293 ~~~ 295 (337)
T 1y3t_A 293 GLF 295 (337)
T ss_dssp STT
T ss_pred ccH
Confidence 543
No 78
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.11 E-value=2.9e-10 Score=94.31 Aligned_cols=74 Identities=16% Similarity=0.102 Sum_probs=64.8
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEE-eCCCCeeEEEecCCccEEEEEEE
Q 042644 71 LSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCV-FPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 71 is~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~-vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
..+.++.++||...++|||+ ..|++||++|++++.+ +++ ...|++||.++ +|+|..|.+.|.++++++++.+.
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~---~~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~ 107 (243)
T 3h7j_A 34 TEVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTV---GDV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDIK 107 (243)
T ss_dssp EEEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEE---TTE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CEEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEE---CCE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEEe
Confidence 46667789999999999996 6899999999999886 455 68999999885 99999999999999999888765
Q ss_pred e
Q 042644 150 N 150 (205)
Q Consensus 150 ~ 150 (205)
.
T Consensus 108 r 108 (243)
T 3h7j_A 108 R 108 (243)
T ss_dssp E
T ss_pred c
Confidence 4
No 79
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.11 E-value=2.8e-10 Score=82.24 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=52.9
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC-eEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR-QVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
..++.+.||. .++|+|+...|++||++|++++.+ ++ + ...+++||++++|+|..|.+.|. +++.++.
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~---~~~~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~ 97 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDF---ADGG--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVL 97 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEE---TTSC--EEEECTTEEEEECTTCCEEEEEE--EEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEE---CCCc--EEEECCCCEEEECCCCcEeeEeC--CCeEEEE
Confidence 4456677776 469999766899999999999886 33 5 68999999999999999999995 4565554
No 80
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.10 E-value=2.9e-10 Score=96.49 Aligned_cols=77 Identities=17% Similarity=0.134 Sum_probs=67.2
Q ss_pred ccceEEEEEEEcCCccc--CCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEE
Q 042644 68 TLGLSVARTDLDVDGMV--VPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATV 145 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~--~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~ 145 (205)
+..+.+.+++++||+.. +.|.| ...|++||++|++++.+ +++ .+.|++||.+++|+|..|.+.|.|++++++
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H-~~eE~~~Vl~G~l~v~v---~g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~ 138 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDP-NAEAVLFVVEGELSLTL---QGQ--VHAMQPGGYAFIPPGADYKVRNTTGQHTRF 138 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCT-TEEEEEEEEESCEEEEE---SSC--EEEECTTEEEEECTTCCEEEECCSSSCEEE
T ss_pred CCcEEEEEEEECCCCccCCCCcCC-CceEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEECCCCCEEE
Confidence 44689999999999876 55778 57899999999999987 344 689999999999999999999999999998
Q ss_pred EEEEe
Q 042644 146 FSVLN 150 (205)
Q Consensus 146 l~~~~ 150 (205)
+.+..
T Consensus 139 l~v~~ 143 (278)
T 1sq4_A 139 HWIRK 143 (278)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88764
No 81
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.10 E-value=2e-10 Score=81.54 Aligned_cols=70 Identities=26% Similarity=0.481 Sum_probs=53.7
Q ss_pred CccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 67 NTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 67 ~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
++..+.+.++. +..++|+|+...|++||++|++.+.+ +++ ...+++||++++|+|..|.+.|.+ ++.++
T Consensus 29 ~~~~~~~~~~~----~~~~~H~H~~~~e~~~v~~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l 97 (102)
T 3d82_A 29 NDYQFKLVKVE----GEFVWHEHADTDEVFIVMEGTLQIAF---RDQ--NITLQAGEMYVIPKGVEHKPMAKE--ECKIM 97 (102)
T ss_dssp TTEEEEEEEEE----EECCCBCCTTCCEEEEEEESEEEEEC---SSC--EEEEETTEEEEECTTCCBEEEEEE--EEEEE
T ss_pred CCCEEEEEEEC----CCCCceeCCCCcEEEEEEeCEEEEEE---CCE--EEEEcCCCEEEECCCCeEeeEcCC--CCEEE
Confidence 33344544442 45899999776899999999999876 344 689999999999999999999973 44444
Q ss_pred E
Q 042644 147 S 147 (205)
Q Consensus 147 ~ 147 (205)
.
T Consensus 98 ~ 98 (102)
T 3d82_A 98 I 98 (102)
T ss_dssp E
T ss_pred E
Confidence 3
No 82
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.09 E-value=4.3e-10 Score=94.16 Aligned_cols=78 Identities=18% Similarity=0.129 Sum_probs=67.2
Q ss_pred cceEEEEEEEcCCcccCCccC-CCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTH-PRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~H-p~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
..+.+.+++++||+....|.| +...|++||++|++++.+ +++ .+.|++||.+++|++..|.+.|.|+++++++.
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~ 131 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA---EGK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFL 131 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE---TTE--EEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 467889999999998766654 456789999999999987 455 78999999999999999999999999999988
Q ss_pred EEeC
Q 042644 148 VLNS 151 (205)
Q Consensus 148 ~~~s 151 (205)
+...
T Consensus 132 v~~~ 135 (261)
T 1rc6_A 132 YKRR 135 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7743
No 83
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.09 E-value=1.2e-09 Score=96.84 Aligned_cols=92 Identities=16% Similarity=0.087 Sum_probs=73.9
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCC
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGL 131 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~ 131 (205)
|..+..++..+- +-....+.+....++||+..++|.|. ..|++||++|++.+.+ +++ +..+++||++++|+|.
T Consensus 276 ~~~l~l~nP~~g-~~~~~tl~~~~~~l~PG~~~~~HrH~-~~~v~~VleG~G~~~V---~ge--~~~~~~GD~~~iP~g~ 348 (394)
T 3bu7_A 276 GLILRYTNPQTG-GHPMLTMGASMQMLRPGEHTKAHRHT-GNVIYNVAKGQGYSIV---GGK--RFDWSEHDIFCVPAWT 348 (394)
T ss_dssp BEEEEECCTTTS-SCSSSSCEEEEEEECTTCBCCCEEES-SCEEEEEEECCEEEEE---TTE--EEEECTTCEEEECTTC
T ss_pred ceEEEEeCCCCC-CCCCCeeeEEEEEECCCCcCCCcccC-CcEEEEEEeCeEEEEE---CCE--EEEEeCCCEEEECCCC
Confidence 445555554432 21233578889999999999999996 5689999999997766 455 7999999999999999
Q ss_pred eeEEEecC-CccEEEEEEEe
Q 042644 132 LHFGFNVG-YEFATVFSVLN 150 (205)
Q Consensus 132 ~H~~~N~g-~~~a~~l~~~~ 150 (205)
.|.+.|.| ++++.++++.+
T Consensus 349 ~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 349 WHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp CEEEEECCSSCCEEEEEEES
T ss_pred eEEeEeCCCCCCeEEEEeeC
Confidence 99999998 79998887754
No 84
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.09 E-value=2.7e-10 Score=100.21 Aligned_cols=79 Identities=19% Similarity=0.155 Sum_probs=69.3
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
+..+.+....+.||+..++|.|. ..|++||++|++....+ +|+ +..+++||++++|+|..|...|.|+++++++.
T Consensus 100 t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~v--dG~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 100 SPTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVV--NGD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp SSSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEE--TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CCceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEE--CCE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 34689999999999999999995 57999999999953333 455 78999999999999999999999999999999
Q ss_pred EEeC
Q 042644 148 VLNS 151 (205)
Q Consensus 148 ~~~s 151 (205)
+++.
T Consensus 175 v~D~ 178 (368)
T 3nw4_A 175 GLDI 178 (368)
T ss_dssp EECH
T ss_pred ecch
Confidence 8874
No 85
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.08 E-value=5.8e-10 Score=87.13 Aligned_cols=72 Identities=21% Similarity=0.205 Sum_probs=59.1
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEe--cEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFK--GVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~--G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
.+++..+.+ ++..++|||+...|++||++ |++++.+ +++ .+.|++||+++||+|..|++. + ++++++
T Consensus 46 p~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~i---dge--~~~l~~GD~v~IPpg~~H~i~--g--~l~~L~ 114 (157)
T 4h7l_A 46 SVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIEL---NGQ--SYPLTKLLAISIPPLVRHRIV--G--EATIIN 114 (157)
T ss_dssp SCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEE---TTE--EEECCTTEEEEECTTCCEEEE--S--CEEEEE
T ss_pred cEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEE---CCE--EEEeCCCCEEEECCCCeEeeE--C--CEEEEE
Confidence 456666555 45568999988889999999 9999987 465 689999999999999999997 2 688888
Q ss_pred EEeCC
Q 042644 148 VLNSQ 152 (205)
Q Consensus 148 ~~~s~ 152 (205)
++...
T Consensus 115 I~~Pp 119 (157)
T 4h7l_A 115 IVSPP 119 (157)
T ss_dssp EEESS
T ss_pred EECCC
Confidence 87643
No 86
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.08 E-value=5.8e-10 Score=98.99 Aligned_cols=79 Identities=18% Similarity=0.098 Sum_probs=69.5
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEe-cCCccEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFN-VGYEFATVF 146 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N-~g~~~a~~l 146 (205)
+..+.+....+.||+..++|.|.. .|++||++|++.+..+ +++ ...+++||++++|.|..|...| .|+++++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~IleG~G~~t~v--~G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAA-SALRFIMEGSGAYTIV--DGH--KVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESS-CEEEEEEECSCEEEEE--TTE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCc-ceEEEEEEeeEEEEEE--CCE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 457899999999999999999955 5999999999976444 465 6899999999999999999999 999999999
Q ss_pred EEEeC
Q 042644 147 SVLNS 151 (205)
Q Consensus 147 ~~~~s 151 (205)
++++.
T Consensus 195 ~v~d~ 199 (394)
T 3bu7_A 195 DGLDI 199 (394)
T ss_dssp EEECH
T ss_pred Ecccc
Confidence 87763
No 87
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.08 E-value=5.1e-10 Score=85.11 Aligned_cols=72 Identities=15% Similarity=0.084 Sum_probs=60.3
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
.+++..++++|| ..|||....|++||++|++++.+ +++ .+.|++||++++|+|..|.+.| .++++++.++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~---~g~--~~~l~~GD~i~~p~g~~h~~~~--~~~~~~l~v~ 125 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRH---EGE--TMIAKAGDVMFIPKGSSIEFGT--PTSVRFLYVA 125 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEE--EEEEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEE---CCE--EEEECCCcEEEECCCCEEEEEe--CCCEEEEEEE
Confidence 688889999999 35667668899999999999886 455 6799999999999999999987 4678887776
Q ss_pred eC
Q 042644 150 NS 151 (205)
Q Consensus 150 ~s 151 (205)
..
T Consensus 126 ~p 127 (133)
T 2pyt_A 126 WP 127 (133)
T ss_dssp ES
T ss_pred cC
Confidence 43
No 88
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.07 E-value=9.5e-10 Score=93.27 Aligned_cols=83 Identities=14% Similarity=0.129 Sum_probs=71.6
Q ss_pred CCCCccceEEEEEEEcCCcccCC-ccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCcc
Q 042644 64 PGLNTLGLSVARTDLDVDGMVVP-HTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEF 142 (205)
Q Consensus 64 P~l~~~gis~~~~~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~ 142 (205)
|.-....+.+.+++++||+..+. |.| ...|.+||++|++.+.+ +++ +..|++||+++++.+..|+++|.|+++
T Consensus 184 p~~~~~~~~~~~~~l~pG~~i~~~~~h-~~e~~~~il~G~~~~~~---~~~--~~~v~~GD~~~~~~~~~h~~~n~g~~~ 257 (278)
T 1sq4_A 184 MSDMRHDMHVNIVNFEPGGVIPFAETH-VMEHGLYVLEGKAVYRL---NQD--WVEVEAGDFMWLRAFCPQACYSGGPGR 257 (278)
T ss_dssp TTCTTCSEEEEEEEECSSSEESCCCCC-SEEEEEEEEECEEEEEE---TTE--EEEEETTCEEEEEESCCEEEECCSSSC
T ss_pred CCCcCCCeEEEEEEECCCCCcCCCCCC-CccEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCCEEEEcCCCCC
Confidence 43345679999999999999987 555 56799999999999876 565 799999999999999999999999999
Q ss_pred EEEEEEEeCC
Q 042644 143 ATVFSVLNSQ 152 (205)
Q Consensus 143 a~~l~~~~s~ 152 (205)
++++.+.+-+
T Consensus 258 ~~yl~~~d~n 267 (278)
T 1sq4_A 258 FRYLLYKDVN 267 (278)
T ss_dssp EEEEEEEECS
T ss_pred EEEEEEEEcC
Confidence 9999988743
No 89
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.07 E-value=8.7e-10 Score=81.00 Aligned_cols=77 Identities=14% Similarity=0.071 Sum_probs=59.2
Q ss_pred ccceEEEEEEEcCCcccCCc--cCCCCCeEEEEEecEEEEEEEeCCCeEEE--EEEcCCCEEEeCCCCeeEEEecCCc-c
Q 042644 68 TLGLSVARTDLDVDGMVVPH--THPRASEMLFVFKGVVIAGFVDTNRQVFQ--VMLKAGEVCVFPRGLLHFGFNVGYE-F 142 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH--~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~--~~l~~GDv~~vP~G~~H~~~N~g~~-~ 142 (205)
+.++.+.++. .+|...+++ +|....|++||++|++++.+ +++ . ..|++||.+++|+|..|.+.|.+++ +
T Consensus 28 ~~~~~i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~---~~~--~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~ 101 (112)
T 2opk_A 28 RKGLKIERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIEC---EGD--TAPRVMRPGDWLHVPAHCRHRVAWTDGGEP 101 (112)
T ss_dssp ETTEEEEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEE---TTC--SSCEEECTTEEEEECTTCCEEEEEECSSSC
T ss_pred CCCEEEEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEE---CCE--EEEEEECCCCEEEECCCCcEEEEeCCCCCC
Confidence 4467777775 455555552 34367899999999999987 344 4 7999999999999999999999876 6
Q ss_pred EEEEEEEe
Q 042644 143 ATVFSVLN 150 (205)
Q Consensus 143 a~~l~~~~ 150 (205)
+.+++++.
T Consensus 102 ~~~l~v~~ 109 (112)
T 2opk_A 102 TVWLAVHC 109 (112)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 76777764
No 90
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.05 E-value=3.1e-09 Score=89.69 Aligned_cols=77 Identities=12% Similarity=0.137 Sum_probs=68.4
Q ss_pred ccceEEEEEEEcCCcccCC-ccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVP-HTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~p-H~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
...+.+.+++++||+..+. |.| ...|.+||++|++.+.+ +++ ++.+++||+++++++..|+++|.|++++++|
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H-~~eh~~~vL~G~g~y~l---~~~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl 256 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVH-YNQHGLLLLEGQGIYRL---GDN--WYPVQAGDVIWMAPFVPQWYAALGKTRSRYL 256 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCC-SCCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred ccceEEEEEEECCCcCcCCceEc-ccceEEEEEeceEEEEE---CCE--EEEecCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 5578999999999999986 778 56799999999999876 455 7999999999999999999999999999998
Q ss_pred EEEe
Q 042644 147 SVLN 150 (205)
Q Consensus 147 ~~~~ 150 (205)
..-+
T Consensus 257 ~ykd 260 (266)
T 4e2q_A 257 LYKD 260 (266)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 7654
No 91
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.05 E-value=1.1e-09 Score=90.04 Aligned_cols=73 Identities=19% Similarity=0.230 Sum_probs=62.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
.+++..+.++||...++|+|+ ..|++||++|++.+.+ +++ .+.+++||.+++|+|..|++.|. .++++++.++
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i---~g~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYV---DGK--PFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEE---TTE--EEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 578899999999999999996 5799999999999886 455 79999999999999999999983 4566665543
No 92
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.04 E-value=3.3e-09 Score=82.40 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=59.1
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
.+++..++++ ++. .|||....|+.||++|++.+.+ +++ ...|++||+++||+|..|.+.|. ++++++++.
T Consensus 65 ~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i---~g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~ 134 (151)
T 4axo_A 65 RLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIII---DGR--KVSASSGELIFIPKGSKIQFSVP--DYARFIYVT 134 (151)
T ss_dssp SCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEE---CCE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 5777777776 433 4677778899999999999986 455 78999999999999999999997 678888776
Q ss_pred eC
Q 042644 150 NS 151 (205)
Q Consensus 150 ~s 151 (205)
..
T Consensus 135 ~P 136 (151)
T 4axo_A 135 YP 136 (151)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 93
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.02 E-value=9.5e-10 Score=92.77 Aligned_cols=78 Identities=13% Similarity=0.094 Sum_probs=66.6
Q ss_pred ccceEEEEEEEcCCcccCCccC-CCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTH-PRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~H-p~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
+..+.+.+++++||+....|.| +...|++||++|++++.+ +++ ...|++||.+++|++.+|.+.|.|+++++++
T Consensus 59 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l 133 (274)
T 1sef_A 59 GATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD---GQE--THELEAGGYAYFTPEMKMYLANAQEADTEVF 133 (274)
T ss_dssp TCSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC---SSC--EEEEETTEEEEECTTSCCEEEESSSSCEEEE
T ss_pred CCcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEE
Confidence 3467889999999997765554 456789999999999886 455 6899999999999999999999999999988
Q ss_pred EEEe
Q 042644 147 SVLN 150 (205)
Q Consensus 147 ~~~~ 150 (205)
.+..
T Consensus 134 ~v~~ 137 (274)
T 1sef_A 134 LYKK 137 (274)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8764
No 94
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=99.00 E-value=5.6e-09 Score=84.05 Aligned_cols=83 Identities=13% Similarity=0.227 Sum_probs=65.6
Q ss_pred EEEEEEEcCCc----------ccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCc
Q 042644 72 SVARTDLDVDG----------MVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYE 141 (205)
Q Consensus 72 s~~~~~l~pgg----------~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~ 141 (205)
+...+.+.|+. ..+.|+|+. .|++||++|++.+.+.+.+++.+...+++||+++||+|..|++.+..+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~ 153 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKN 153 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCC
Confidence 44556677765 348999975 7999999999999987654666678999999999999999999987777
Q ss_pred cEEEEEEEeCCCCce
Q 042644 142 FATVFSVLNSQNPGV 156 (205)
Q Consensus 142 ~a~~l~~~~s~~pg~ 156 (205)
.+.++-+|.. .|+.
T Consensus 154 ~~~airlF~~-~~~W 167 (191)
T 1vr3_A 154 YVKAMRLFVG-EPVW 167 (191)
T ss_dssp CEEEEEEESS-SCCC
T ss_pred CEEEEEEECC-CCCc
Confidence 7777777753 3444
No 95
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.99 E-value=1e-09 Score=92.68 Aligned_cols=88 Identities=13% Similarity=0.047 Sum_probs=69.7
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCC
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGL 131 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~ 131 (205)
+..++.+-.. .+ +..+.+.+++++||+..+.|.| ...|++||++|++++.+.+ ++ +++|++||.+++|++.
T Consensus 55 ~~~~~vL~sP---~~-G~~f~~~lv~l~PGg~s~~~~h-~~EEfiyVleG~l~l~l~~--g~--~~~L~~Gds~y~p~~~ 125 (266)
T 4e2q_A 55 NTLGAYLITP---AT-GSHFVMYLAKMKEMSSSGLPPQ-DIERLIFVVEGAVTLTNTS--SS--SKKLTVDSYAYLPPNF 125 (266)
T ss_dssp SEEEEEEECG---GG-TCSSEEEEEEECSSEECCCCCT-TEEEEEEEEEECEEEEC----CC--CEEECTTEEEEECTTC
T ss_pred CEEEEEEcCC---CC-CCcEEEEEEEECcCCcCCCCCC-CCeEEEEEEEEEEEEEECC--Cc--EEEEcCCCEEEECCCC
Confidence 4455444433 33 3478999999999998888866 6889999999999998731 44 6899999999999999
Q ss_pred eeEEEecCCccEEEEEEEe
Q 042644 132 LHFGFNVGYEFATVFSVLN 150 (205)
Q Consensus 132 ~H~~~N~g~~~a~~l~~~~ 150 (205)
.|++.|. ++++++.+..
T Consensus 126 ~H~~~N~--~~Ar~l~V~k 142 (266)
T 4e2q_A 126 HHSLDCV--ESATLVVFER 142 (266)
T ss_dssp CCEEEES--SCEEEEEEEE
T ss_pred CEEEEeC--CCEEEEEEEe
Confidence 9999994 6888887754
No 96
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.98 E-value=3e-09 Score=86.91 Aligned_cols=78 Identities=18% Similarity=0.082 Sum_probs=67.5
Q ss_pred CccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 67 NTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 67 ~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
....+.+..+.++||...|.|.|+ ..|++||++|++++.+. +++ ...+++||++++|+|..|+++ .+++|+.++
T Consensus 128 ~s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~--~g~--~~~l~pGd~v~ipsgv~Ha~r-t~dePllal 201 (217)
T 4b29_A 128 LTQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLR--NAP--DLMLEPGQTRFHPANAPHAMT-TLTDPILTL 201 (217)
T ss_dssp ECSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEET--TSC--CEEECTTCEEEECTTCCEEEE-CCSSCEEEE
T ss_pred CCCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEEC--CCC--EEecCCCCEEEcCCCCceeEE-ECCccEEEE
Confidence 344789999999999999999997 68999999999998873 244 689999999999999999998 588999877
Q ss_pred EEEe
Q 042644 147 SVLN 150 (205)
Q Consensus 147 ~~~~ 150 (205)
.+..
T Consensus 202 wvW~ 205 (217)
T 4b29_A 202 VLWR 205 (217)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
No 97
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.92 E-value=7e-09 Score=85.11 Aligned_cols=73 Identities=7% Similarity=0.004 Sum_probs=63.9
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
++.+.++.++||...++|.|| ..|++||++|++++.+ +++ ...|++||++++|+|.+|.+.|. ++++++.++
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~-~~~~~~Vl~G~~~~~i---~~~--~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~i~ 107 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAML-GNRYYYCFNGNGEIFI---ENN--KKTISNGDFLEITANHNYSIEAR--DNLKLIEIG 107 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCS-SCEEEEEEESEEEEEE---SSC--EEEEETTEEEEECSSCCEEEEES--SSEEEEEEE
T ss_pred CcEEEEEEECCCCccCccccC-CCEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEEC--CCcEEEEEE
Confidence 678899999999999999996 6799999999999987 344 68999999999999999999985 467777765
Q ss_pred e
Q 042644 150 N 150 (205)
Q Consensus 150 ~ 150 (205)
.
T Consensus 108 ~ 108 (227)
T 3rns_A 108 E 108 (227)
T ss_dssp E
T ss_pred e
Confidence 3
No 98
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.82 E-value=1.5e-08 Score=73.31 Aligned_cols=63 Identities=14% Similarity=0.148 Sum_probs=50.2
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEE
Q 042644 75 RTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFAT 144 (205)
Q Consensus 75 ~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~ 144 (205)
...+.||.. +.| | ...|++||++|++++.+. +++ ...|++||++++|+|..|.+.|.++....
T Consensus 35 ~~~~~pg~~-~~h-H-~~~E~~~Vl~G~~~~~i~--~g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-Y-DTNETCYILEGKVEVTTE--DGK--KYVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp EEEECSEEE-EEE-C-SSCEEEEEEEEEEEEEET--TCC--EEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-C-CceEEEEEEeCEEEEEEC--CCC--EEEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 566778764 355 6 578999999999998862 144 68999999999999999999997665443
No 99
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.79 E-value=3.1e-09 Score=84.79 Aligned_cols=70 Identities=20% Similarity=0.249 Sum_probs=55.6
Q ss_pred cCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCce
Q 042644 84 VVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGV 156 (205)
Q Consensus 84 ~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~ 156 (205)
.++|+|+. .|++||++|++.+.+. .+++.+...+++||+++||+|..|++.+..+..+.++-+|... |+.
T Consensus 93 ~~~H~H~~-~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~-~~w 162 (179)
T 1zrr_A 93 LNEHTHGE-DEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP-EGW 162 (179)
T ss_dssp HSCBEESS-CEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG-GGE
T ss_pred ccceECCh-heEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC-CCc
Confidence 68999975 7999999999998775 3566566789999999999999999987655556666666543 543
No 100
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.76 E-value=3.8e-08 Score=81.72 Aligned_cols=72 Identities=14% Similarity=0.105 Sum_probs=61.9
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
..+.+.+++++||+....|+ ..|++||++|++++.+ +++ .+.|++||.+++|++..|.+.|. ++++++.+
T Consensus 48 ~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~---~~~--~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~v 117 (246)
T 1sfn_A 48 ARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAV---GGE--TRTLREYDYVYLPAGEKHMLTAK--TDARVSVF 117 (246)
T ss_dssp CSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEEC---SSC--EEEECTTEEEEECTTCCCEEEEE--EEEEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeC--CCEEEEEE
Confidence 46788999999999887774 6799999999999886 455 68999999999999999999998 77877776
Q ss_pred Ee
Q 042644 149 LN 150 (205)
Q Consensus 149 ~~ 150 (205)
..
T Consensus 118 ~~ 119 (246)
T 1sfn_A 118 EK 119 (246)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 101
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.74 E-value=8.2e-08 Score=76.16 Aligned_cols=79 Identities=19% Similarity=0.160 Sum_probs=62.5
Q ss_pred ceEEEEEEEcCCcccCCccCCC------CCeEEEEEecEEEEEEEeCCCeE------------------EEEEEcCCCEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPR------ASEMLFVFKGVVIAGFVDTNRQV------------------FQVMLKAGEVC 125 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~------a~Ei~yVl~G~~~v~~~~~~~~~------------------~~~~l~~GDv~ 125 (205)
....-++.+.||...|.|.|+. -.|-++|+.|.+++.+ ++.+. ...+|++||.+
T Consensus 52 ~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~--~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesv 129 (175)
T 2y0o_A 52 RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV--EGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQY 129 (175)
T ss_dssp SEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE--SSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEE
T ss_pred CceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE--CCccccCcceeccCCceeeecCCcEEEECCCCEE
Confidence 4788889999999999999999 8999999999988876 22221 24699999999
Q ss_pred EeCCCCeeEEEecCCccEEEEEEEeCC
Q 042644 126 VFPRGLLHFGFNVGYEFATVFSVLNSQ 152 (205)
Q Consensus 126 ~vP~G~~H~~~N~g~~~a~~l~~~~s~ 152 (205)
.+|+|.+|++.| |.+. +++.-+++.
T Consensus 130 tIppg~~H~f~a-geeg-vli~EvSt~ 154 (175)
T 2y0o_A 130 TIPPNTKHWFQA-GEEG-AVVTEMSST 154 (175)
T ss_dssp EECTTCCEEEEE-EEEE-EEEEEEEEC
T ss_pred EECCCCcEEEEe-CCCC-EEEEEEeCC
Confidence 999999999998 3344 444444443
No 102
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.72 E-value=7.7e-08 Score=77.51 Aligned_cols=71 Identities=15% Similarity=0.089 Sum_probs=60.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
+..+..+.++||+..+.|+|+ ..|+.||++|++. +. ...+.+||.+.+|.|..|...+.+.+.+++++++
T Consensus 124 ~~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----de-----~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~ 193 (195)
T 2q1z_B 124 EAIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----DE-----TDRFGAGDIEIADQELEHTPVAERGLDCICLAAT 193 (195)
T ss_dssp SSEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----CS-----SSEEETTCEEEECSSCCCCCEECSSSCEEEEEEE
T ss_pred CcEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----CC-----cEEECCCeEEEeCcCCccCCEeCCCCCEEEEEEe
Confidence 356678999999999999995 6799999999965 32 3579999999999999999998778889988876
Q ss_pred e
Q 042644 150 N 150 (205)
Q Consensus 150 ~ 150 (205)
+
T Consensus 194 d 194 (195)
T 2q1z_B 194 D 194 (195)
T ss_dssp C
T ss_pred c
Confidence 5
No 103
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.71 E-value=4.1e-08 Score=73.58 Aligned_cols=67 Identities=12% Similarity=-0.003 Sum_probs=54.5
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCcc
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEF 142 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~ 142 (205)
.+++...++.||... .|+|. ..|++||++|++++.+ ++++ ..+|++||++++|+|..|.+.|.+...
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~-~~E~~~Vl~G~~~l~~--~~g~--~~~l~~GD~~~ip~g~~h~~~~~~~~r 114 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG-YIEYCHIIEGEARLVD--PDGT--VHAVKAGDAFIMPEGYTGRWEVDRHVK 114 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT-EEEEEEEEEEEEEEEC--TTCC--EEEEETTCEEEECTTCCCEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCC-CcEEEEEEEEEEEEEE--CCCe--EEEECCCCEEEECCCCeEEEEECCcee
Confidence 578888899998754 46663 2899999999999875 2455 689999999999999999999986543
No 104
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.67 E-value=4.4e-07 Score=71.78 Aligned_cols=85 Identities=16% Similarity=0.214 Sum_probs=72.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEe-CCCe---EEEEEEcCCCEEEeCCCCeeEEEecCCccEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVD-TNRQ---VFQVMLKAGEVCVFPRGLLHFGFNVGYEFATV 145 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~-~~~~---~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~ 145 (205)
++++..+...||...++|-|.++..+++|++|+++..+.. ++++ ..+..+++||++++|++.+|.+.|.++++++.
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVS 147 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVS 147 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEE
Confidence 6799999999999999999988889999999999886543 2232 23678999999999999999999999999999
Q ss_pred EEEEeCCCC
Q 042644 146 FSVLNSQNP 154 (205)
Q Consensus 146 l~~~~s~~p 154 (205)
|-++..+..
T Consensus 148 lHvY~pp~~ 156 (171)
T 3eqe_A 148 LHVYSPPLE 156 (171)
T ss_dssp EEEEESCCC
T ss_pred EEEeCCCcc
Confidence 888876654
No 105
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.66 E-value=1.3e-07 Score=82.52 Aligned_cols=77 Identities=16% Similarity=0.220 Sum_probs=62.4
Q ss_pred CccceEEEEEEEcC---CcccCCccCCCCCeEEEEEecEEEEEEEeCCC-eEEEEEEcCCCEEEeCCCCeeEEEecCCcc
Q 042644 67 NTLGLSVARTDLDV---DGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR-QVFQVMLKAGEVCVFPRGLLHFGFNVGYEF 142 (205)
Q Consensus 67 ~~~gis~~~~~l~p---gg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~-~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~ 142 (205)
+...+++.++++.+ |+..+.|.| ...|++||++|++.+.+ ++ + ...|++||++++|+|.+|.+.|.++.
T Consensus 245 ~~~~f~~~~i~~~~~~~g~~~~~h~~-~~~~~~~vleG~~~i~i---~g~~--~~~l~~Gd~~~iPag~~h~~~~~~~~- 317 (350)
T 1juh_A 245 QDTNYTLSTISMSTTPSTVTVPTWSF-PGACAFQVQEGRVVVQI---GDYA--ATELGSGDVAFIPGGVEFKYYSEAYF- 317 (350)
T ss_dssp GGGCEEEEEEEECCCCTTSCCCCBCC-SSCEEEEEEESCEEEEE---TTSC--CEEECTTCEEEECTTCCEEEEESSSS-
T ss_pred ceeEEEEEEEeeccccCCCCCCcccC-CCcEEEEEEeeEEEEEE---CCeE--EEEeCCCCEEEECCCCCEEEEecCCe-
Confidence 43457888888888 447788888 56899999999999987 34 4 68999999999999999999997654
Q ss_pred EEEEEEEe
Q 042644 143 ATVFSVLN 150 (205)
Q Consensus 143 a~~l~~~~ 150 (205)
+.++.+.+
T Consensus 318 ~~~l~~~~ 325 (350)
T 1juh_A 318 SKVLFVSS 325 (350)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 66666654
No 106
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.65 E-value=3e-07 Score=80.83 Aligned_cols=89 Identities=15% Similarity=0.108 Sum_probs=70.2
Q ss_pred Cee-EEEeccCC-CCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCC
Q 042644 52 YSS-LTLVTAAD-FPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPR 129 (205)
Q Consensus 52 g~~-~~~~~~~~-~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~ 129 (205)
|.. +..+|..+ -+.+. -|++....|+||....+|.|. +.++++|++|++++.+ +++ ++..++||+|++|+
T Consensus 260 g~~~~~y~NP~tg~~~~p--ti~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I---~~~--~~~w~~gD~fvvP~ 331 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMP--TLRCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVM---NGE--TTKLEKGDMFVVPS 331 (368)
T ss_dssp TEEEEECBCTTTSSBSSS--SCEEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECT
T ss_pred ceEEEEEeCCCCCCCcch--hHHhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEE---CCE--EEEecCCCEEEECC
Confidence 445 66666443 23344 467777789999999999995 6699999999999887 455 78999999999999
Q ss_pred CCeeEEEecCCccEEEEEEEe
Q 042644 130 GLLHFGFNVGYEFATVFSVLN 150 (205)
Q Consensus 130 G~~H~~~N~g~~~a~~l~~~~ 150 (205)
+..|...|. +++.++.+-+
T Consensus 332 w~~h~~~n~--~~a~Lf~~~D 350 (368)
T 3nw4_A 332 WVPWSLQAE--TQFDLFRFSD 350 (368)
T ss_dssp TCCEEEEES--SSEEEEEEES
T ss_pred CCcEEEEeC--CCEEEEEEeC
Confidence 999999996 6777766543
No 107
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.63 E-value=1.1e-07 Score=74.33 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=62.4
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEec--CCccEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNV--GYEFATVFS 147 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~--g~~~a~~l~ 147 (205)
+..+.++.++||+..++|+|+. .|.+|||+|++.+ +.++ ..+++||.++.|+|..|...+. ++++++++.
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~---~e~~----~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~ 112 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRY---KEHD----WVAHAGSVVYETASTRHTPQSAYAEGPDIITFN 112 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEE---TTSS----CCBCTTCEEEECSSEEECEEESSSSSSCEEEEE
T ss_pred CeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEE---eCCC----eEECCCeEEEECCCCcceeEeCCCCCCCEEEEE
Confidence 5788889999999999999965 7889999999874 2222 4799999999999999999998 778898887
Q ss_pred EEeC
Q 042644 148 VLNS 151 (205)
Q Consensus 148 ~~~s 151 (205)
+.+-
T Consensus 113 ~~~G 116 (159)
T 3ebr_A 113 IVAG 116 (159)
T ss_dssp EEES
T ss_pred EecC
Confidence 6653
No 108
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.59 E-value=4.4e-08 Score=75.21 Aligned_cols=77 Identities=13% Similarity=-0.073 Sum_probs=58.7
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeE-EEEEEcCCCEEEeCCCCeeE-EEecCCccEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQV-FQVMLKAGEVCVFPRGLLHF-GFNVGYEFATVFS 147 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~-~~~~l~~GDv~~vP~G~~H~-~~N~g~~~a~~l~ 147 (205)
+-.+.++.++||+..++|+|+. .|.+||++|++... .+.. ....+++||.+++|+|..|. ..+ .+.++++.
T Consensus 43 g~~~~~~~~~pG~~~p~H~H~~-~ee~~VL~G~~~~~----~g~~~~~~~~~~Gd~~~~p~g~~H~p~~~--~e~~~~l~ 115 (145)
T 2o1q_A 43 GSWTAIFDCPAGSSFAAHVHVG-PGEYFLTKGKMDVR----GGKAAGGDTAIAPGYGYESANARHDKTEF--PVASEFYM 115 (145)
T ss_dssp TEEEEEEEECTTEEECCEEESS-CEEEEEEEEEEEET----TCGGGTSEEEESSEEEEECTTCEESCCEE--EEEEEEEE
T ss_pred ccEEEEEEECCCCCCCccCCCC-CEEEEEEEeEEEEc----CCCEecceEeCCCEEEEECcCCccCCeEC--CCCeEEEE
Confidence 3467789999999999999975 56699999999843 2321 12789999999999999999 433 45567777
Q ss_pred EEeCCC
Q 042644 148 VLNSQN 153 (205)
Q Consensus 148 ~~~s~~ 153 (205)
+++...
T Consensus 116 ~~~gp~ 121 (145)
T 2o1q_A 116 SFLGPL 121 (145)
T ss_dssp EEESCE
T ss_pred EECCcc
Confidence 776543
No 109
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.58 E-value=2.1e-07 Score=80.35 Aligned_cols=77 Identities=22% Similarity=0.163 Sum_probs=63.4
Q ss_pred EEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCC-CeEEEEEEcC-C---CEEEeCCCCeeEEEecCCccEEEE
Q 042644 72 SVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTN-RQVFQVMLKA-G---EVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 72 s~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~-~~~~~~~l~~-G---Dv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
.....++.||.....|||.+..|.++|++|++.+.+-++. ++ ...+.. | +.+++|+|..|.+.|.|+++++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDE--IIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCC--CEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCc--EEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 4455678999999999999999999999999998776544 34 445555 6 999999999999999998999877
Q ss_pred EEEe
Q 042644 147 SVLN 150 (205)
Q Consensus 147 ~~~~ 150 (205)
..-+
T Consensus 351 ~~~~ 354 (369)
T 3st7_A 351 MWVN 354 (369)
T ss_dssp EEES
T ss_pred EecC
Confidence 6543
No 110
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.56 E-value=5.5e-07 Score=70.97 Aligned_cols=68 Identities=13% Similarity=0.127 Sum_probs=54.9
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecC
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVG 139 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g 139 (205)
..+.++ ..-.|++....|.| ...|++||++|++.+.+.+ +++.....|++||++++|+|+.|+-...+
T Consensus 34 ~~~~V~-~v~Gpn~r~d~H~h-~~dE~FyvlkG~m~i~v~d-~g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 34 SDFIVT-VVGGPNHRTDYHDD-PLEEFFYQLRGNAYLNLWV-DGRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CSEEEE-EECSCBCCCCEEEC-SSCEEEEEEESCEEEEEEE-TTEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred CcEEEE-EEcCCCcCccCcCC-CCceEEEEEeeEEEEEEEc-CCceeeEEECCCCEEEeCCCCCcCccccC
Confidence 344443 33567778999988 6789999999999999987 45455799999999999999999997654
No 111
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.51 E-value=1.7e-06 Score=70.42 Aligned_cols=82 Identities=13% Similarity=0.082 Sum_probs=69.2
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEe--CCCeE----EEEEEcCCCEEEeCC--CCeeEEEec-CC
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVD--TNRQV----FQVMLKAGEVCVFPR--GLLHFGFNV-GY 140 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~--~~~~~----~~~~l~~GDv~~vP~--G~~H~~~N~-g~ 140 (205)
.+.+..+...||...++|-|.. ..+++|++|++...+.. .+++. .+.++++||+++++. |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 6889999999999999999976 89999999999877643 23322 258999999999999 999999999 68
Q ss_pred ccEEEEEEEeCC
Q 042644 141 EFATVFSVLNSQ 152 (205)
Q Consensus 141 ~~a~~l~~~~s~ 152 (205)
++++.|-++...
T Consensus 157 ~~avsLHvY~~~ 168 (208)
T 2gm6_A 157 RVSISIHVYGAN 168 (208)
T ss_dssp SCEEEEEEESSC
T ss_pred CcEEEEEEEcCC
Confidence 899988888543
No 112
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.49 E-value=4.5e-07 Score=71.27 Aligned_cols=74 Identities=19% Similarity=0.134 Sum_probs=59.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecC--CccEEEEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVG--YEFATVFS 147 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g--~~~a~~l~ 147 (205)
+..+.++.++||+..++|+|+ ..|.+|||+|++... ++. ...+++||.+..|+|..|...+.. +++++++.
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~f~~~----~~~--~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~ 114 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHT-GTVHMYTISGCWYYT----EYP--GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIF 114 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEES-SCEEEEEEESEEEET----TCT--TSCEETTEEEEECTTCEECEECCTTCSSCEEEEE
T ss_pred CcEEEEEEECCCCcCCcccCC-CCEEEEEEEEEEEEC----CCc--eEEECCCeEEEeCCCCceeeEeCCCCCCCcEEEE
Confidence 567889999999999999996 579999999999752 221 257899999999999999998854 33786666
Q ss_pred EEe
Q 042644 148 VLN 150 (205)
Q Consensus 148 ~~~ 150 (205)
+.+
T Consensus 115 v~~ 117 (165)
T 3cjx_A 115 MLS 117 (165)
T ss_dssp EEE
T ss_pred EEe
Confidence 655
No 113
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.46 E-value=3.7e-07 Score=69.52 Aligned_cols=68 Identities=13% Similarity=0.238 Sum_probs=53.3
Q ss_pred CCcccCCccCCCCCeEEEEEecEEEEEEEeCC-C--eEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE
Q 042644 80 VDGMVVPHTHPRASEMLFVFKGVVIAGFVDTN-R--QVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 80 pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~-~--~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
++++..+|.|++..|+|+|++|++++.+-+.. + +.....+++|++++||+|+.|..... +.+.++.+=
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~--~e~~vLLiE 108 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ--KDTKMMYVQ 108 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC--TTCEEEEEE
T ss_pred cccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC--CceEEEEEE
Confidence 45678899999999999999999999887421 1 12368999999999999999999864 445555443
No 114
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.41 E-value=2.7e-06 Score=64.59 Aligned_cols=58 Identities=14% Similarity=0.131 Sum_probs=47.8
Q ss_pred CCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCC-ccEEEEEE
Q 042644 85 VPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGY-EFATVFSV 148 (205)
Q Consensus 85 ~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~-~~a~~l~~ 148 (205)
.||.| +.-|++||++|++.+.+ +++ .+.+++||++++|+|.+|...+.++ ++...+.+
T Consensus 32 ~p~~h-~~~~i~~v~~G~~~~~i---~~~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i 90 (164)
T 2arc_A 32 RPLGM-KGYILNLTIRGQGVVKN---QGR--EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWV 90 (164)
T ss_dssp ETTCC-SSEEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEE
T ss_pred cccCC-CceEEEEEEEeEEEEEE---CCE--EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEE
Confidence 58999 67799999999999886 455 7899999999999999999988763 55555443
No 115
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.33 E-value=1.3e-05 Score=64.83 Aligned_cols=86 Identities=14% Similarity=0.053 Sum_probs=71.8
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeC--CC-----eEEEEEEcCCCEEEe-CCCCeeEEEecC-C
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDT--NR-----QVFQVMLKAGEVCVF-PRGLLHFGFNVG-Y 140 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~--~~-----~~~~~~l~~GDv~~v-P~G~~H~~~N~g-~ 140 (205)
.+++..+...||...++|-|.++..+++|++|+++..+.+- ++ ...+.++++||+.++ |.+.+|.+.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 58888999999999999999878999999999999876541 11 123689999999999 888899999998 7
Q ss_pred ccEEEEEEEeCCCCc
Q 042644 141 EFATVFSVLNSQNPG 155 (205)
Q Consensus 141 ~~a~~l~~~~s~~pg 155 (205)
++++-|=++.....+
T Consensus 149 ~~avSlHvY~pp~~~ 163 (200)
T 3eln_A 149 EPAVSLHLYSPPFDT 163 (200)
T ss_dssp CCEEEEEEEESCCSE
T ss_pred CCEEEEEeCCCCccc
Confidence 899888888766544
No 116
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.29 E-value=5.3e-06 Score=65.32 Aligned_cols=59 Identities=15% Similarity=0.289 Sum_probs=49.5
Q ss_pred EcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC----eEEEEEEcCCCEEEeCCCCeeEEEec
Q 042644 78 LDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR----QVFQVMLKAGEVCVFPRGLLHFGFNV 138 (205)
Q Consensus 78 l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~----~~~~~~l~~GDv~~vP~G~~H~~~N~ 138 (205)
-.|+...-.|.| ...|++|+++|+..+.+.+. + +.....+++||++++|+|+.|+-+..
T Consensus 41 gGPn~r~D~H~~-~~eE~Fy~lkG~m~l~v~d~-g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 41 GGPNERTDYHIN-PTPEWFYQKKGSMLLKVVDE-TDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp CSSBCCSCEEEC-SSCEEEEEEESCEEEEEEEC-SSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred cCCCcCCcCcCC-CCceEEEEEeCEEEEEEEcC-CCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 345567889955 67899999999999999873 4 45579999999999999999998654
No 117
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.20 E-value=5.2e-06 Score=68.17 Aligned_cols=83 Identities=20% Similarity=0.173 Sum_probs=63.3
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCC
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGL 131 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~ 131 (205)
|.+...+.... . ..+..+..+.++||+..++|+|+ ..|.+|||+|++. +. ...+.+||.+..|+|.
T Consensus 28 Gv~~~~L~~~~--~--e~g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d~-----~~~~~~Gd~~~~P~g~ 93 (223)
T 3o14_A 28 GVERRMLDRIG--G--EVARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----DE-----HGDYPAGTYVRNPPTT 93 (223)
T ss_dssp TEEEEEEEEES--S--SSCEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----ET-----TEEEETTEEEEECTTC
T ss_pred CEEEEEeecCC--C--ccccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----EC-----CeEECCCeEEEeCCCC
Confidence 55555553221 1 12456778899999999999995 5799999999975 32 3689999999999999
Q ss_pred eeEEEecCCccEEEEEEEe
Q 042644 132 LHFGFNVGYEFATVFSVLN 150 (205)
Q Consensus 132 ~H~~~N~g~~~a~~l~~~~ 150 (205)
.|.... .+.+.+++.+.
T Consensus 94 ~H~p~a--~~gc~~~vk~~ 110 (223)
T 3o14_A 94 SHVPGS--AEGCTIFVKLW 110 (223)
T ss_dssp EECCEE--SSCEEEEEEES
T ss_pred ccccEe--CCCCEEEEEec
Confidence 999875 56688887764
No 118
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.17 E-value=1.1e-05 Score=67.99 Aligned_cols=59 Identities=14% Similarity=0.273 Sum_probs=50.3
Q ss_pred cCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecC
Q 042644 79 DVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVG 139 (205)
Q Consensus 79 ~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g 139 (205)
.|+...-.| |....|+||+++|...+.+.+ +++.....+++||++++|+|+.|.-....
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d-~g~~~~V~i~eGemfllP~gv~HsP~r~~ 97 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLE-QGKHRDVVIRQGEIFLLPARVPHSPQRFA 97 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEE-TTEEEEEEECTTEEEEECTTCCEEEEECT
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEe-CCceeeEEECCCeEEEeCCCCCcCCcccC
Confidence 344457889 888899999999999999987 46666799999999999999999997643
No 119
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=98.12 E-value=5e-05 Score=58.08 Aligned_cols=94 Identities=12% Similarity=0.086 Sum_probs=66.3
Q ss_pred CeeEEEecc-CCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCC-EEEeCC
Q 042644 52 YSSLTLVTA-ADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGE-VCVFPR 129 (205)
Q Consensus 52 g~~~~~~~~-~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GD-v~~vP~ 129 (205)
.|.++.+.. .+.|- .-.. .+.....+||....+|.|....|++++++|+..+.+.+ +....+..|.+.+ .+.||+
T Consensus 17 RG~L~~~e~~~~ipf-~ikR-vy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldD-g~~~~~~~L~~~~~gL~Ipp 93 (141)
T 2pa7_A 17 RGSLVAIEENKNIPF-SIKR-VYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDD-GNIIQEITLDSPAVGLYVGP 93 (141)
T ss_dssp TEEEEEEETTTTSSS-CCCE-EEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEEC-SSCEEEEEECCTTEEEEECT
T ss_pred CCcEEEEeccCCCCC-CccE-EEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEEC-CcEEEEEEECCCCcEEEeCC
Confidence 567777765 33333 2111 22223456888999999999999999999999998854 3334567776655 589999
Q ss_pred CCeeEEEecCCccEEEEEEE
Q 042644 130 GLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 130 G~~H~~~N~g~~~a~~l~~~ 149 (205)
|.+|.+.+.+.. ++++.+-
T Consensus 94 gvWh~~~~~s~~-avllvla 112 (141)
T 2pa7_A 94 AVWHEMHDFSSD-CVMMVLA 112 (141)
T ss_dssp TCEEEEECCCTT-CEEEEEE
T ss_pred CEEEEEEEcCCC-eEEEEEC
Confidence 999999998775 5555443
No 120
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=98.08 E-value=6.5e-05 Score=59.39 Aligned_cols=98 Identities=13% Similarity=0.038 Sum_probs=69.7
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCC------CeEEEEEEc---CC
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTN------RQVFQVMLK---AG 122 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~------~~~~~~~l~---~G 122 (205)
.|.+.+....+...+... .........+|.+...|+|....++++|++|++...++|-. ++.....|. ..
T Consensus 35 RG~f~e~~~~~~~~~~~f-~Q~n~s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~ 113 (174)
T 3ejk_A 35 GGPVLHMLRLDSPQFSQF-GEIYFSEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNY 113 (174)
T ss_dssp TSCEECCCCTTCTTCCCC-CEEEEEEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBC
T ss_pred CcCEEEEEecCccCCCCe-eEEEEEECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCc
Confidence 446666554333222111 11222334788899999998889999999999999888743 455778887 56
Q ss_pred CEEEeCCCCeeEEEecCCccEEEEEEEe
Q 042644 123 EVCVFPRGLLHFGFNVGYEFATVFSVLN 150 (205)
Q Consensus 123 Dv~~vP~G~~H~~~N~g~~~a~~l~~~~ 150 (205)
..++||+|.+|.+.+.++++++++...+
T Consensus 114 ~~L~IP~G~aHgf~~lsd~~av~ly~~s 141 (174)
T 3ejk_A 114 RLLRIPPQVWYGFAATGDTPALVANCTD 141 (174)
T ss_dssp EEEEECTTCEEEEEECTTSCEEEEEEES
T ss_pred eEEEeCCCcEEEEEEccCCCEEEEEECC
Confidence 7999999999999999887777665544
No 121
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.99 E-value=0.00025 Score=55.71 Aligned_cols=131 Identities=14% Similarity=0.039 Sum_probs=89.7
Q ss_pred CCCCeeEEEeccCCCC-CCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEE-EEEEEeCCCeEEEEE----EcCC
Q 042644 49 KFPYSSLTLVTAADFP-GLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVV-IAGFVDTNRQVFQVM----LKAG 122 (205)
Q Consensus 49 ~~~g~~~~~~~~~~~P-~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~-~v~~~~~~~~~~~~~----l~~G 122 (205)
+- ||+..+.....-+ .-.....+....-|.+|....+|.. ++.|+.|...|.. ++.++.++++....+ +.+|
T Consensus 27 PE-GG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv-~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~G 104 (170)
T 1yud_A 27 VE-GGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRL-TADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAG 104 (170)
T ss_dssp TT-SSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEEC-SSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTT
T ss_pred CC-CceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEc-CCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccC
Confidence 44 8888887765411 1122346778888999998889998 6999999999995 888888888765555 4678
Q ss_pred CE--EEeCCCCeeEEEecCCccEEEEEEEeCCCCceeeccccccCCCCCCHHHHHhhcCCCHHHHHHhh
Q 042644 123 EV--CVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSISDAAFSDFDTIDDLVRKFIPFLCWTIRVSE 189 (205)
Q Consensus 123 Dv--~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~~f~~~~~~~evLa~af~v~~~~v~~l~ 189 (205)
+. ++||+|.++..++.+.+-+.+-++. .||+..-...+ .+.+.|.+.|---++.++++-
T Consensus 105 e~pQ~vVP~G~wqaa~~~~g~~~LV~C~V---aPGF~f~dfel-----~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 105 ERPQFLVPKGCIFGSAMNQDGFSLVGCMV---SPGFTFDDFEL-----FSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp EESCEEECTTCEEEEEESSSSEEEEEEEE---SSCCCGGGCCB-----CBHHHHHHSCCTTHHHHTTSC
T ss_pred ceeEEEECCCCEEEEEECCCCcEEEEEEE---CCCccCCceEE-----cCHHHHHhHCchhHHHHHHhh
Confidence 98 9999999999998732433333332 35543221112 246667777777777777765
No 122
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=97.98 E-value=1.1e-05 Score=62.54 Aligned_cols=88 Identities=14% Similarity=0.003 Sum_probs=62.3
Q ss_pred CeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeE-EEEEEcCCCEEEeCCC
Q 042644 52 YSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQV-FQVMLKAGEVCVFPRG 130 (205)
Q Consensus 52 g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~-~~~~l~~GDv~~vP~G 130 (205)
|.++..+... | ..|-...++.++||+.+++|+|+ ..|.+|||+|++.... +.. ....+++|+.++.|+|
T Consensus 32 Gv~~k~L~~~--~---e~g~~t~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~~----Gd~~~~~~~~aGsYv~ePpG 101 (153)
T 3bal_A 32 GITWQLLHSS--P---ETSSWTAIFNCPAGSSFASHIHA-GPGEYFLTKGKMEVRG----GEQEGGSTAYAPSYGFESSG 101 (153)
T ss_dssp CCEEEEEEEE--T---TTTEEEEEEEECTTEEECCEEES-SCEEEEEEESEEEETT----CGGGTSEEEESSEEEEECTT
T ss_pred CeEEEEEEEC--C---ccceEEEEEEeCCCCCccCccCC-CCEEEEEEEEEEEecC----ccccCccccCCCeEEEcCCC
Confidence 5566555221 2 24788889999999999999997 4688999999997542 210 1367899999999999
Q ss_pred CeeEEEecCCccEEEEEEEe
Q 042644 131 LLHFGFNVGYEFATVFSVLN 150 (205)
Q Consensus 131 ~~H~~~N~g~~~a~~l~~~~ 150 (205)
..|..... ++..+++....
T Consensus 102 s~H~p~~~-~~~~~~~~~~~ 120 (153)
T 3bal_A 102 ALHGKTFF-PVESQFYMTFL 120 (153)
T ss_dssp CEESCCEE-SSCEEEEEEEE
T ss_pred CcccceeC-CCCeEEEEEEE
Confidence 99985432 33344444443
No 123
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.92 E-value=0.00026 Score=57.60 Aligned_cols=83 Identities=14% Similarity=0.067 Sum_probs=67.7
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEe--CCCeEE----EEEEcCCCEEEeCCC--CeeEEEecC-C
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVD--TNRQVF----QVMLKAGEVCVFPRG--LLHFGFNVG-Y 140 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~--~~~~~~----~~~l~~GDv~~vP~G--~~H~~~N~g-~ 140 (205)
.+++..+...||...++|=|. +.-++.|++|+++..+.. ++++.. ..++.+||+++++++ .+|.+.|.+ +
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 588999999999999999997 899999999999876543 233321 378999999999877 899999984 7
Q ss_pred ccEEEEEEEeCCC
Q 042644 141 EFATVFSVLNSQN 153 (205)
Q Consensus 141 ~~a~~l~~~~s~~ 153 (205)
++++-|=++....
T Consensus 151 ~~avSLHvYg~pl 163 (211)
T 3uss_A 151 RTSISIHVYGANI 163 (211)
T ss_dssp SCEEEEEEESSCG
T ss_pred CCEEEEEEcCCCC
Confidence 8888877776543
No 124
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.81 E-value=0.00017 Score=59.67 Aligned_cols=73 Identities=22% Similarity=0.234 Sum_probs=54.5
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
.++++..+.+ .|...... +| .+|++||++|++++.. +++ ..++++||+++||+|..|.+...+.-. .+++.
T Consensus 45 ~~~~~G~~~~-~g~~~v~~-~p-~dE~~~VleG~~~lt~---~g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~~-~~y~~ 115 (238)
T 3myx_A 45 QGIAAGIVEF-GTALSVEA-YP-YTEMLVMHRGSVTLTS---GTD--SVTLSTGESAVIGRGTQVRIDAQPESL-WAFCA 115 (238)
T ss_dssp TSEEEEEEEE-CSEEEESS-CS-SEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECTTEE-EEEEE
T ss_pred CCeEEEEEEe-cccccccc-CC-CcEEEEEEEeEEEEEC---CCe--EEEEcCCCEEEECCCCEEEEEecCCeE-EEEEe
Confidence 3788888888 55544322 21 3799999999999875 455 689999999999999999998765443 34455
Q ss_pred Ee
Q 042644 149 LN 150 (205)
Q Consensus 149 ~~ 150 (205)
+.
T Consensus 116 ~~ 117 (238)
T 3myx_A 116 ST 117 (238)
T ss_dssp EC
T ss_pred cc
Confidence 66
No 125
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.80 E-value=0.00015 Score=53.64 Aligned_cols=63 Identities=14% Similarity=0.094 Sum_probs=48.2
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEec
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNV 138 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~ 138 (205)
.+.+......||...-. ++ ...|++|||+|++++.. .+|+ ..++++||++++|+|..-.+.-.
T Consensus 41 ~~~~GvWe~tPG~~~~~-~~-~~~E~~~iLeG~~~lt~--ddG~--~~~l~aGD~~~~P~G~~gtWev~ 103 (116)
T 3es4_A 41 GTIVAVWMAEPGIYNYA-GR-DLEETFVVVEGEALYSQ--ADAD--PVKIGPGSIVSIAKGVPSRLEIL 103 (116)
T ss_dssp CCEEEEEEECSEEEEEC-CC-SEEEEEEEEECCEEEEE--TTCC--CEEECTTEEEEECTTCCEEEEEC
T ss_pred CEEEEEEecCCceeECe-eC-CCcEEEEEEEeEEEEEe--CCCe--EEEECCCCEEEECCCCeEEEEEe
Confidence 35666678999976532 23 23499999999999875 3455 68999999999999999888654
No 126
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.61 E-value=0.00033 Score=57.82 Aligned_cols=73 Identities=7% Similarity=0.017 Sum_probs=53.2
Q ss_pred ceEEEEEEEcCCc--ccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEec--CCccEEE
Q 042644 70 GLSVARTDLDVDG--MVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNV--GYEFATV 145 (205)
Q Consensus 70 gis~~~~~l~pgg--~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~--g~~~a~~ 145 (205)
++-+....+.... ..++||| +.-|++||++|++. .+ + +.....+.+++||++++|+|.+|.+... ++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~G~~~-~i-~-~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~ 81 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYI-NDYKMFWIDSGIAK-LI-D-KNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINV 81 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEEC-SSCEEEEESSSCEE-EE-E-TTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEEE
T ss_pred hhhhhhhhhhcccchhccHhhh-cceEEEEEecCceE-EE-C-CccceeEEEcCCCEEEEcCCCceeeccccCCCcceEE
Confidence 4555666666655 4588999 77899999999999 65 3 2200148899999999999999998765 3344443
Q ss_pred E
Q 042644 146 F 146 (205)
Q Consensus 146 l 146 (205)
+
T Consensus 82 ~ 82 (276)
T 3gbg_A 82 S 82 (276)
T ss_dssp E
T ss_pred E
Confidence 3
No 127
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.54 E-value=0.00063 Score=56.27 Aligned_cols=63 Identities=13% Similarity=0.172 Sum_probs=50.9
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEec
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNV 138 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~ 138 (205)
.++.......||...+.++ +..|++|||+|++++.. .+|+ ..++++||+++||+|..-.+.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~--~~~E~~~ILeG~v~lt~--~~G~--~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPH--KIHELMNLIEGRVVLSL--ENGS--SLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEEC--SSCEEEEEEECCEEEEE--TTSC--EEEECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcC--CCCEEEEEEEeEEEEEe--CCCC--EEEECCCCEEEECCCCEEEEEEC
Confidence 5788889999988554433 46799999999999864 3565 68999999999999998888754
No 128
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=97.34 E-value=0.0026 Score=50.62 Aligned_cols=70 Identities=17% Similarity=0.095 Sum_probs=55.4
Q ss_pred cCCcccCCccC--CCCCeEEEEEecEEEEEEEeCC------CeEEEEEEcC--CCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 79 DVDGMVVPHTH--PRASEMLFVFKGVVIAGFVDTN------RQVFQVMLKA--GEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 79 ~pgg~~~pH~H--p~a~Ei~yVl~G~~~v~~~~~~------~~~~~~~l~~--GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
.+|.+...|+| ....++++|++|++..-++|-. ++.....|.+ +..++||+|.+|.+.+.++. ++++..
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 37889999999 7778999999999866566643 3667788865 58999999999999999876 555544
Q ss_pred E
Q 042644 149 L 149 (205)
Q Consensus 149 ~ 149 (205)
.
T Consensus 135 ~ 135 (185)
T 1ep0_A 135 C 135 (185)
T ss_dssp E
T ss_pred c
Confidence 3
No 129
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=97.27 E-value=0.0032 Score=50.03 Aligned_cols=71 Identities=17% Similarity=0.022 Sum_probs=55.5
Q ss_pred cCCcccCCccC--CCCCeEEEEEecEEEEEEEeCC------CeEEEEEEcC--CCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 79 DVDGMVVPHTH--PRASEMLFVFKGVVIAGFVDTN------RQVFQVMLKA--GEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 79 ~pgg~~~pH~H--p~a~Ei~yVl~G~~~v~~~~~~------~~~~~~~l~~--GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
.+|.+...|+| .....+++|++|++..-++|-. ++.....|.+ +..++||+|.+|.+.+.++. ++++..
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 37889999999 6778999999999865556532 4667788865 58999999999999999876 555544
Q ss_pred Ee
Q 042644 149 LN 150 (205)
Q Consensus 149 ~~ 150 (205)
.+
T Consensus 136 ~s 137 (184)
T 2ixk_A 136 TT 137 (184)
T ss_dssp ES
T ss_pred CC
Confidence 33
No 130
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=97.18 E-value=0.0026 Score=51.43 Aligned_cols=68 Identities=18% Similarity=0.210 Sum_probs=54.1
Q ss_pred cCCcccCCccCC---CCCeEEEEEecEEEEEEEeCC------CeEEEEEEcC--CCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 79 DVDGMVVPHTHP---RASEMLFVFKGVVIAGFVDTN------RQVFQVMLKA--GEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 79 ~pgg~~~pH~Hp---~a~Ei~yVl~G~~~v~~~~~~------~~~~~~~l~~--GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
.+|.++..|+|. ...++++|++|++..-++|-. ++.....|.+ +..++||+|.+|.+.+.++. +.++.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~Y 156 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVMY 156 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEEE
Confidence 678899999994 367999999999876666632 5667788875 78999999999999999865 54443
No 131
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.18 E-value=0.0019 Score=53.84 Aligned_cols=72 Identities=18% Similarity=0.236 Sum_probs=55.9
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCC--CCeeEEEecCC-ccEEEEEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPR--GLLHFGFNVGY-EFATVFSV 148 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~--G~~H~~~N~g~-~~a~~l~~ 148 (205)
+....+.||.-+++|-|.+-..+.||++|+++-. |+.|. ..++++||+-+..+ |+.|.-+|..+ ++++++-.
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQl 140 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQL 140 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEE
Confidence 4456789999899999966555779999998754 55455 68999999999955 67999999754 67776554
No 132
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=97.17 E-value=0.0024 Score=51.35 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=57.1
Q ss_pred cCCcccCCccCCCCCeEEEEEe-cEEEEEEEeCC-----CeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEe
Q 042644 79 DVDGMVVPHTHPRASEMLFVFK-GVVIAGFVDTN-----RQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLN 150 (205)
Q Consensus 79 ~pgg~~~pH~Hp~a~Ei~yVl~-G~~~v~~~~~~-----~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~ 150 (205)
.+|.+...|+| ....+++|++ |++..-++|-. ++.....|..+..++||+|.+|.+.+.++. ++++...+
T Consensus 68 ~~GvlRGlH~h-~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~s 143 (197)
T 1nxm_A 68 RKNVLRGLHAE-PWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLVN 143 (197)
T ss_dssp ETTBEEEEEEC-SSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEES
T ss_pred CCCCcceeeec-ccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEECC
Confidence 67889999999 5679999999 99876667754 677788999999999999999999998765 55544433
No 133
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.16 E-value=0.0014 Score=53.58 Aligned_cols=65 Identities=18% Similarity=0.197 Sum_probs=53.0
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 71 LSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 71 is~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
-.+..+.++||..+++|.| ...|+ +||+|++. + + ..++.+|+.+..|.|..|.... |++.+.++.
T Consensus 146 E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d-~----~~~~~~GsWlR~P~gs~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 146 ETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----V-N----DEVLGRNAWLRLPEGEALSATA-GARGAKIWM 210 (223)
T ss_dssp CEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----E-T----TEEECTTEEEEECTTCCEEEEE-EEEEEEEEE
T ss_pred cEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----E-C----CceECCCeEEEeCCCCccCcEE-CCCCeEEEE
Confidence 3456677899999999999 88886 99999975 2 2 2689999999999999999976 667776554
No 134
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=97.15 E-value=0.0024 Score=47.77 Aligned_cols=65 Identities=22% Similarity=0.172 Sum_probs=52.4
Q ss_pred CCcccCCc----cCCCCCeEEEEEecEEEEEEEeCCCe---EEEEEEcCCCEEEeCCCCeeEEEecCCccEEE
Q 042644 80 VDGMVVPH----THPRASEMLFVFKGVVIAGFVDTNRQ---VFQVMLKAGEVCVFPRGLLHFGFNVGYEFATV 145 (205)
Q Consensus 80 pgg~~~pH----~Hp~a~Ei~yVl~G~~~v~~~~~~~~---~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~ 145 (205)
|+++...| +|+...+.+.|++|++.+...++++. .......+|+..++|++.+|.+.-..+ ++.+
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f 94 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYF 94 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEE
Confidence 67888999 58888899999999999987665553 234667999999999999999997544 5555
No 135
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=97.07 E-value=0.0056 Score=49.11 Aligned_cols=68 Identities=16% Similarity=0.152 Sum_probs=53.3
Q ss_pred cCCcccCCccCCC---CCeEEEEEecEEEEEEEeCC------CeEEEEEEcC--CCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 79 DVDGMVVPHTHPR---ASEMLFVFKGVVIAGFVDTN------RQVFQVMLKA--GEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 79 ~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~~~~~~------~~~~~~~l~~--GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
.+|.+...|+|.. ..++++|++|++..-++|-. ++.....|.+ +..++||+|.+|.+.+.++. ++++.
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~ly 151 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIYF 151 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 5788899999954 57999999999966666632 4567788875 68999999999999999764 54443
No 136
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=97.04 E-value=0.0076 Score=47.77 Aligned_cols=69 Identities=19% Similarity=0.080 Sum_probs=53.9
Q ss_pred cCCcccCCccCC---CCCeEEEEEecEEEEEEEeCC------CeEEEEEEcC--CCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 79 DVDGMVVPHTHP---RASEMLFVFKGVVIAGFVDTN------RQVFQVMLKA--GEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 79 ~pgg~~~pH~Hp---~a~Ei~yVl~G~~~v~~~~~~------~~~~~~~l~~--GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
.+|.+...|+|. ....+++|++|++..-++|-. |+.....|.+ +..++||+|.+|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 378899999995 567999999999865556633 4567788865 58999999999999999776 54444
Q ss_pred E
Q 042644 148 V 148 (205)
Q Consensus 148 ~ 148 (205)
.
T Consensus 134 ~ 134 (183)
T 1dzr_A 134 K 134 (183)
T ss_dssp E
T ss_pred E
Confidence 3
No 137
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=97.03 E-value=0.0089 Score=49.14 Aligned_cols=76 Identities=21% Similarity=0.092 Sum_probs=57.5
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEec-EE--EEEEEeCC-------------CeEE------EEEEcCCCEEEe
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKG-VV--IAGFVDTN-------------RQVF------QVMLKAGEVCVF 127 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G-~~--~v~~~~~~-------------~~~~------~~~l~~GDv~~v 127 (205)
..+--.+.+.+|...|.|+|+.-.|-+++.-| .+ ++...+++ |... ..+|+||+-+-+
T Consensus 105 ~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 105 CYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp CEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred cceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 56777788999999999999999999999998 34 44433322 1111 358999999999
Q ss_pred CCCCeeEEEecCC-ccEEE
Q 042644 128 PRGLLHFGFNVGY-EFATV 145 (205)
Q Consensus 128 P~G~~H~~~N~g~-~~a~~ 145 (205)
++|..|++...+. .++.+
T Consensus 185 ~Pg~~H~F~ae~g~G~vli 203 (246)
T 3kmh_A 185 PPGLYHSFWAEAGFGDVLV 203 (246)
T ss_dssp CTTEEEEEEECTTSCCEEE
T ss_pred CCCCEEEEEecCCCccEEE
Confidence 9999999987654 34544
No 138
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.96 E-value=0.0088 Score=48.64 Aligned_cols=68 Identities=16% Similarity=0.012 Sum_probs=53.2
Q ss_pred cCCcccCCccCCC---CCeEEEEEecEEEEEEEeCC------CeEEEEEEcCC--CEEEeCCCCeeEEEecCCccEEEEE
Q 042644 79 DVDGMVVPHTHPR---ASEMLFVFKGVVIAGFVDTN------RQVFQVMLKAG--EVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 79 ~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~~~~~~------~~~~~~~l~~G--Dv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
.+|-+...|+|.. ..++++|++|++..-++|-. ++.....|.+. ..++||+|.+|.+.+.++. ++++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEEE
Confidence 4788999999954 58999999999865556532 45677888764 7999999999999999876 54444
No 139
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.96 E-value=0.0093 Score=48.11 Aligned_cols=70 Identities=13% Similarity=0.130 Sum_probs=54.3
Q ss_pred cCCcccCCccCCC---CCeEEEEEecEEEEEEEeCC------CeEEEEEEcC--CCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 79 DVDGMVVPHTHPR---ASEMLFVFKGVVIAGFVDTN------RQVFQVMLKA--GEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 79 ~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~~~~~~------~~~~~~~l~~--GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
.+|.+...|+|.. ...+++|++|++..-++|-. |+.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 5788899999954 57999999999866666632 4567788876 57999999999999999766 54444
Q ss_pred EE
Q 042644 148 VL 149 (205)
Q Consensus 148 ~~ 149 (205)
..
T Consensus 134 ~~ 135 (205)
T 1oi6_A 134 ML 135 (205)
T ss_dssp EE
T ss_pred ec
Confidence 33
No 140
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.90 E-value=0.013 Score=47.97 Aligned_cols=68 Identities=18% Similarity=0.118 Sum_probs=53.1
Q ss_pred cCCcccCCccCCC---CCeEEEEEecEEEEEEEeCC------CeEEEEEEcC--CCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 79 DVDGMVVPHTHPR---ASEMLFVFKGVVIAGFVDTN------RQVFQVMLKA--GEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 79 ~pgg~~~pH~Hp~---a~Ei~yVl~G~~~v~~~~~~------~~~~~~~l~~--GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
.+|-+...|+|.. ...+++|++|++..-++|-. ++.....|.+ +..++||+|.+|.+.+.++. ++++.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEEE
Confidence 5788899999954 57999999999866566532 4566778866 47999999999999999876 54444
No 141
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.85 E-value=0.0069 Score=52.39 Aligned_cols=70 Identities=20% Similarity=0.218 Sum_probs=50.8
Q ss_pred EEEcC-CcccCCccCCCCCeEEEEEecEEEEEEE-eCC---------------------------------CeEEEEEEc
Q 042644 76 TDLDV-DGMVVPHTHPRASEMLFVFKGVVIAGFV-DTN---------------------------------RQVFQVMLK 120 (205)
Q Consensus 76 ~~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~~~-~~~---------------------------------~~~~~~~l~ 120 (205)
+-+.| |+..++|+-+. .-++..+.|+=++.+. .++ ...++.+|+
T Consensus 145 ~~~gp~g~~~~~H~D~~-dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAY-TNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECSS-EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECCh-hcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 44555 77899999843 4666778899887777 322 012578999
Q ss_pred CCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 121 AGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 121 ~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
+||++++|+|.+|+..+.++++..-+
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsv 249 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNI 249 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEE
Confidence 99999999999999998754444333
No 142
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.84 E-value=0.0082 Score=48.30 Aligned_cols=69 Identities=13% Similarity=0.067 Sum_probs=54.5
Q ss_pred cCCcccCCccCC---CCCeEEEEEecEEEEEEEeCC------CeEEEEEEcC--CCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 79 DVDGMVVPHTHP---RASEMLFVFKGVVIAGFVDTN------RQVFQVMLKA--GEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 79 ~pgg~~~pH~Hp---~a~Ei~yVl~G~~~v~~~~~~------~~~~~~~l~~--GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
.+|.+..+|+|. ....+++|++|++.--++|-. |+.....|.+ +..++||+|..|.+.+.++. +.++.
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~-a~~~Y 130 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD-ATLVF 130 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC-eEEEE
Confidence 578899999994 468999999999877777632 5667778876 78999999999999998765 44443
Q ss_pred E
Q 042644 148 V 148 (205)
Q Consensus 148 ~ 148 (205)
.
T Consensus 131 ~ 131 (201)
T 4hn1_A 131 L 131 (201)
T ss_dssp E
T ss_pred e
Confidence 3
No 143
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.80 E-value=0.0071 Score=49.96 Aligned_cols=73 Identities=18% Similarity=0.296 Sum_probs=56.1
Q ss_pred EEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEe--CCCCeeEEEecC-CccEEEEEE
Q 042644 72 SVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVF--PRGLLHFGFNVG-YEFATVFSV 148 (205)
Q Consensus 72 s~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~v--P~G~~H~~~N~g-~~~a~~l~~ 148 (205)
.+....+.||.-+++|-|.+-..+.||++|++.-. |+.|. ..++++||+-.. -+|..|.-+|.. ++++.++-.
T Consensus 42 v~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQl 117 (242)
T 1tq5_A 42 VINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQI 117 (242)
T ss_dssp EEEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEE
T ss_pred eeccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEE
Confidence 34466789998899999966656889999998754 55454 589999999999 456999999975 367766554
No 144
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.51 E-value=0.015 Score=46.21 Aligned_cols=65 Identities=14% Similarity=0.246 Sum_probs=47.9
Q ss_pred EEEEcCC-cccCCccCCCCCeEEEEEecEEEEEEEeCCC----------------------------------eEEEEEE
Q 042644 75 RTDLDVD-GMVVPHTHPRASEMLFVFKGVVIAGFVDTNR----------------------------------QVFQVML 119 (205)
Q Consensus 75 ~~~l~pg-g~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~----------------------------------~~~~~~l 119 (205)
.+-+.++ +..++|+-+. .-++.+++|+=++.+..+.. +..+.+|
T Consensus 127 ~~wiG~~gs~t~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 205 (235)
T 4gjz_A 127 NAWFGPQGTISPLHQDPQ-QNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCIL 205 (235)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEE
T ss_pred EEEEeCCCCCceeeeccc-cceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEE
Confidence 3445554 4567787754 45777889999888865421 1246799
Q ss_pred cCCCEEEeCCCCeeEEEecCC
Q 042644 120 KAGEVCVFPRGLLHFGFNVGY 140 (205)
Q Consensus 120 ~~GDv~~vP~G~~H~~~N~g~ 140 (205)
++||+++||+|..|...|.+.
T Consensus 206 ~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 206 SPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp CTTCEEEECTTCEEEEEESSS
T ss_pred CCCCEEEeCCCCcEEEEECCC
Confidence 999999999999999999854
No 145
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.43 E-value=0.013 Score=50.69 Aligned_cols=72 Identities=10% Similarity=0.093 Sum_probs=53.0
Q ss_pred EEEc-CCcccCCccCCCCCeEEEEEecEEEEEEEeCCC-----------------------------------eEEEEEE
Q 042644 76 TDLD-VDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR-----------------------------------QVFQVML 119 (205)
Q Consensus 76 ~~l~-pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~-----------------------------------~~~~~~l 119 (205)
+-+. +|...++|+.+. .-+..+++|+=++.+..+.. +.++.+|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 4455 455779999865 56778899998887764320 3468999
Q ss_pred cCCCEEEeCCCCeeEEEecCC-ccEEEEEE
Q 042644 120 KAGEVCVFPRGLLHFGFNVGY-EFATVFSV 148 (205)
Q Consensus 120 ~~GDv~~vP~G~~H~~~N~g~-~~a~~l~~ 148 (205)
++||+++||+|.+|...|.++ .....+.+
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~ 295 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNF 295 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 999999999999999999863 33444443
No 146
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=96.04 E-value=0.026 Score=47.02 Aligned_cols=72 Identities=22% Similarity=0.179 Sum_probs=59.4
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCee-EEEecCCccEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLH-FGFNVGYEFATVF 146 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H-~~~N~g~~~a~~l 146 (205)
..|-|-.++.++|+--.|+-.|.-..| +||++|++.++ ...+.++...++|+|+.- .+.-.|.+++.+|
T Consensus 88 d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G---------~~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~iL 157 (303)
T 2qdr_A 88 DSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG---------EWQLNKHSYSFIPAGVRIGSWKVLGGEEAEIL 157 (303)
T ss_dssp TTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET---------TEEECTTEEEEECTTCCBCCEEEETTSCEEEE
T ss_pred CCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC---------CEEecCCceEEecCCCccCceeecCCCCcEEE
Confidence 447899999999999999998865667 99999999864 268999999999999854 3455688899888
Q ss_pred EEE
Q 042644 147 SVL 149 (205)
Q Consensus 147 ~~~ 149 (205)
.+-
T Consensus 158 ~fe 160 (303)
T 2qdr_A 158 WME 160 (303)
T ss_dssp EEE
T ss_pred EEe
Confidence 773
No 147
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=96.04 E-value=0.051 Score=45.54 Aligned_cols=81 Identities=19% Similarity=0.204 Sum_probs=53.1
Q ss_pred cceEEEEEEEcCCccc---CCccCCCC--C------eEEEE-E---ecEEEEEEEeCCCe-EEEEEEcCCCEEEeCCCCe
Q 042644 69 LGLSVARTDLDVDGMV---VPHTHPRA--S------EMLFV-F---KGVVIAGFVDTNRQ-VFQVMLKAGEVCVFPRGLL 132 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~---~pH~Hp~a--~------Ei~yV-l---~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP~G~~ 132 (205)
-.+-+..+ +.|||.- |||.|.+. . |+.|. + +|.+.-.+..++++ -....++-||++++|+|.
T Consensus 151 ~~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy- 228 (270)
T 2qjv_A 151 DSLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY- 228 (270)
T ss_dssp SSCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB-
T ss_pred ceEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc-
Confidence 34666666 7788854 99999754 5 88875 3 35555544443332 246899999999999999
Q ss_pred eEEEecCCccEEEEEEEeC
Q 042644 133 HFGFNVGYEFATVFSVLNS 151 (205)
Q Consensus 133 H~~~N~g~~~a~~l~~~~s 151 (205)
|.....-.-...+|-+.-.
T Consensus 229 Hp~~a~pGy~~YylwvMaG 247 (270)
T 2qjv_A 229 HPVATIAGYDNYYLNVMAG 247 (270)
T ss_dssp CCEEECTTCEEEEEEEEEC
T ss_pred CCCcCCCCcccEEEEEEEC
Confidence 9965442333445554433
No 148
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.77 E-value=0.034 Score=49.73 Aligned_cols=63 Identities=22% Similarity=0.367 Sum_probs=46.0
Q ss_pred EEEcCCc-c-cCCccCCCCCeEEEEEecEEEEEEEeCCC----------------eEEEEEEcCCCEEEeCCCCeeEEEe
Q 042644 76 TDLDVDG-M-VVPHTHPRASEMLFVFKGVVIAGFVDTNR----------------QVFQVMLKAGEVCVFPRGLLHFGFN 137 (205)
Q Consensus 76 ~~l~pgg-~-~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~----------------~~~~~~l~~GDv~~vP~G~~H~~~N 137 (205)
+-+.|+| . .++||- ...-++..++|+=++.+..+.. ..+..+|++||++++|+|.+|+..+
T Consensus 143 ~y~~~~g~~g~~~H~D-~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 143 VYITPAGSQGLPPHYD-DVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EEEECTTCBCSCSEEC-SSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred eEECCCCCCCccceEC-CcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 3445555 3 369997 3445666778988877766531 1247899999999999999999988
Q ss_pred cC
Q 042644 138 VG 139 (205)
Q Consensus 138 ~g 139 (205)
.+
T Consensus 222 ~~ 223 (442)
T 2xdv_A 222 PA 223 (442)
T ss_dssp CS
T ss_pred cC
Confidence 75
No 149
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=95.66 E-value=0.57 Score=36.57 Aligned_cols=128 Identities=15% Similarity=-0.003 Sum_probs=83.4
Q ss_pred CeeEEEeccCCC----CCC--CccceEEEEEEEcCCcccCCccCCCCCeEEEEEecE-EEEEEEeCCCeEEEEEEc----
Q 042644 52 YSSLTLVTAADF----PGL--NTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGV-VIAGFVDTNRQVFQVMLK---- 120 (205)
Q Consensus 52 g~~~~~~~~~~~----P~l--~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~-~~v~~~~~~~~~~~~~l~---- 120 (205)
||+.++...... +.. .....+....-|.+|.....|.- ++.|+.+-..|. +++.++.++|+....+|.
T Consensus 28 GG~yrEt~rs~~~v~~~~~~~~R~~~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~ 106 (172)
T 3loi_A 28 GGWFRETYRSDVQVEAEGFDGKRSVLTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLE 106 (172)
T ss_dssp SSEEEEEEECSCEECCTTSSSCEESCEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTT
T ss_pred CCeEEEEEECcCcccCCCCCCCcccceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcc
Confidence 667776665432 111 12235667777888887666666 689999999997 688888888887777775
Q ss_pred CCC---EEEeCCCCeeEEEecCCccEEEEEEEeCCCCceeeccccccCCCCCCHHHHHhhcCCCHHHHHHhhh
Q 042644 121 AGE---VCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSISDAAFSDFDTIDDLVRKFIPFLCWTIRVSEM 190 (205)
Q Consensus 121 ~GD---v~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~~f~~~~~~~evLa~af~v~~~~v~~l~~ 190 (205)
+|+ -++||+|.+...+. | ...++... -.||+..-...+ .+.+.|.+.|---++.+++|-.
T Consensus 107 ~Ge~~pQ~vVP~G~WqaA~~-~--~~~LVsct--VaPGF~f~dfel-----~~~~~L~~~~P~~~~~I~~lt~ 169 (172)
T 3loi_A 107 HPEARHQVVVPRRVWFAQEV-D--GYCLASVL--VAPGFDFKDFSL-----GKREELIKEYPQHRDVIMRCTS 169 (172)
T ss_dssp STTCBSEEEECTTCEEEEEE-S--SEEEEEEE--EESCCCGGGCEE-----CCHHHHHHHCGGGHHHHHHTSC
T ss_pred cCCcceEEEECCCEEEEEEe-C--CcEEEEEE--EcCCccchhcEE-----cCHHHHHHHCchHHHHHHHhcc
Confidence 577 78999999888776 3 33333322 225543222222 2567777777777778877754
No 150
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=95.51 E-value=0.044 Score=49.17 Aligned_cols=76 Identities=16% Similarity=0.122 Sum_probs=54.1
Q ss_pred EcCCcccCCccCCCCCe-EEEEEecEEEEEEEeCC-------------------------CeEEEEEEcCCCEEEeCCCC
Q 042644 78 LDVDGMVVPHTHPRASE-MLFVFKGVVIAGFVDTN-------------------------RQVFQVMLKAGEVCVFPRGL 131 (205)
Q Consensus 78 l~pgg~~~pH~Hp~a~E-i~yVl~G~~~v~~~~~~-------------------------~~~~~~~l~~GDv~~vP~G~ 131 (205)
-.+|...+.|+.+..+- +..+++|+=++.+.-|. .+.+..++++||+++||.|.
T Consensus 203 Gp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGW 282 (451)
T 2yu1_A 203 SVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGW 282 (451)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTC
T ss_pred ccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCc
Confidence 34556779999987654 56799999988877653 12357899999999999999
Q ss_pred eeEEEecCCccEEEEEEEeCCC
Q 042644 132 LHFGFNVGYEFATVFSVLNSQN 153 (205)
Q Consensus 132 ~H~~~N~g~~~a~~l~~~~s~~ 153 (205)
+|...|..+.-++-.-++++.+
T Consensus 283 wH~V~nledsIait~NF~~~~n 304 (451)
T 2yu1_A 283 IHAVYTPTDTLVFGGNFLHSFN 304 (451)
T ss_dssp EEEEECSSCEEEEEEEECCSSS
T ss_pred eEEEecCCCeEEEeeeeCCccc
Confidence 9999997544332223344443
No 151
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=95.49 E-value=0.037 Score=50.12 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=49.4
Q ss_pred cCCcccCCccCCCCCe-EEEEEecEEEEEEEeCC-------------------------CeEEEEEEcCCCEEEeCCCCe
Q 042644 79 DVDGMVVPHTHPRASE-MLFVFKGVVIAGFVDTN-------------------------RQVFQVMLKAGEVCVFPRGLL 132 (205)
Q Consensus 79 ~pgg~~~pH~Hp~a~E-i~yVl~G~~~v~~~~~~-------------------------~~~~~~~l~~GDv~~vP~G~~ 132 (205)
..|+..+.|+.+..+- +..+++|+=++.+.-|. .+.+..++++||+++||.|.+
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 4566789999987763 55799999988887653 123578999999999999999
Q ss_pred eEEEecCC
Q 042644 133 HFGFNVGY 140 (205)
Q Consensus 133 H~~~N~g~ 140 (205)
|+.+|..+
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999743
No 152
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=95.44 E-value=0.058 Score=46.54 Aligned_cols=65 Identities=17% Similarity=0.199 Sum_probs=49.2
Q ss_pred EEEcC-CcccCCccCCCCC-eEEEEEecEEEEEEEeCCC---------------------------------------eE
Q 042644 76 TDLDV-DGMVVPHTHPRAS-EMLFVFKGVVIAGFVDTNR---------------------------------------QV 114 (205)
Q Consensus 76 ~~l~p-gg~~~pH~Hp~a~-Ei~yVl~G~~~v~~~~~~~---------------------------------------~~ 114 (205)
+-+.+ |...+.|+.+..+ -+..++.|+=++.+..++. +.
T Consensus 176 ~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~ 255 (336)
T 3k2o_A 176 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKP 255 (336)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCC
T ss_pred EEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCce
Confidence 34444 4567889987654 5778999988877765431 12
Q ss_pred EEEEEcCCCEEEeCCCCeeEEEecCC
Q 042644 115 FQVMLKAGEVCVFPRGLLHFGFNVGY 140 (205)
Q Consensus 115 ~~~~l~~GDv~~vP~G~~H~~~N~g~ 140 (205)
++.++++||++++|+|.+|+..|.++
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSC
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCC
Confidence 46889999999999999999999865
No 153
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.37 E-value=0.044 Score=47.11 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=50.2
Q ss_pred EEEEcC-CcccCCccCCCCCeEEEEEecEEEEEEEeCC------------------------------CeEEEEEEcCCC
Q 042644 75 RTDLDV-DGMVVPHTHPRASEMLFVFKGVVIAGFVDTN------------------------------RQVFQVMLKAGE 123 (205)
Q Consensus 75 ~~~l~p-gg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~------------------------------~~~~~~~l~~GD 123 (205)
.+-+.+ |+..++|+-+. .-++.+++|+=++.+..+. .+.++.+|++||
T Consensus 170 ~l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD 248 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGD 248 (338)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTC
T ss_pred eeEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCC
Confidence 334444 55678898764 4566788999888776541 024688999999
Q ss_pred EEEeCCCCeeEEEecCCccEEEEE
Q 042644 124 VCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 124 v~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
+++||+|.+|...|.+ ....+.
T Consensus 249 ~LyiP~gWwH~v~~l~--~sisvn 270 (338)
T 3al5_A 249 VLFIPALWFHNVISEE--FGVGVN 270 (338)
T ss_dssp EEEECTTCEEEEEESS--CEEEEE
T ss_pred EEEECCCCeEEEeeCC--CEEEEE
Confidence 9999999999999984 334444
No 154
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=95.15 E-value=0.08 Score=47.44 Aligned_cols=64 Identities=17% Similarity=0.185 Sum_probs=49.8
Q ss_pred EcCCcccCCccCCCCCe-EEEEEecEEEEEEEeCC-------------------------CeEEEEEEcCCCEEEeCCCC
Q 042644 78 LDVDGMVVPHTHPRASE-MLFVFKGVVIAGFVDTN-------------------------RQVFQVMLKAGEVCVFPRGL 131 (205)
Q Consensus 78 l~pgg~~~pH~Hp~a~E-i~yVl~G~~~v~~~~~~-------------------------~~~~~~~l~~GDv~~vP~G~ 131 (205)
-..|+....|.-+..+- +..|++|+=++.+.-|. .+.+..++++||+++||.|.
T Consensus 238 G~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGW 317 (447)
T 3kv4_A 238 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGW 317 (447)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCC
Confidence 34566778899887764 45799999988877553 12357899999999999999
Q ss_pred eeEEEecCCc
Q 042644 132 LHFGFNVGYE 141 (205)
Q Consensus 132 ~H~~~N~g~~ 141 (205)
+|+.+|..+.
T Consensus 318 wH~V~nleds 327 (447)
T 3kv4_A 318 IHAVLTPVDC 327 (447)
T ss_dssp EEEEEESSCE
T ss_pred eEEEecCCCE
Confidence 9999998544
No 155
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=95.12 E-value=0.11 Score=43.52 Aligned_cols=67 Identities=18% Similarity=0.194 Sum_probs=52.2
Q ss_pred EEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCC--CCeeEEEecCCccEEEEE
Q 042644 77 DLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPR--GLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 77 ~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~--G~~H~~~N~g~~~a~~l~ 147 (205)
...++.-+++|=|.+-.-+.||++|++.-. |+-|. ..++++||+=..-+ |..|.-+|..+++++.+=
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQ 113 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHF--DSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQ 113 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEE
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEE
Confidence 667888899999955444669999998754 55565 68999999888876 688999998777776554
No 156
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=95.10 E-value=0.063 Score=46.99 Aligned_cols=63 Identities=17% Similarity=0.204 Sum_probs=49.7
Q ss_pred EcCCcccCCccCCCCCe-EEEEEecEEEEEEEeCC-------------------------CeEEEEEEcCCCEEEeCCCC
Q 042644 78 LDVDGMVVPHTHPRASE-MLFVFKGVVIAGFVDTN-------------------------RQVFQVMLKAGEVCVFPRGL 131 (205)
Q Consensus 78 l~pgg~~~pH~Hp~a~E-i~yVl~G~~~v~~~~~~-------------------------~~~~~~~l~~GDv~~vP~G~ 131 (205)
-.+|+..+.|..+..+- +..+++|+=++.+.-|. .+.+..++++||+++||.|.
T Consensus 154 Gp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGW 233 (371)
T 3k3o_A 154 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGW 233 (371)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCC
Confidence 35566789999988775 45799999888877543 12357899999999999999
Q ss_pred eeEEEecCC
Q 042644 132 LHFGFNVGY 140 (205)
Q Consensus 132 ~H~~~N~g~ 140 (205)
+|+.+|..+
T Consensus 234 wH~V~nled 242 (371)
T 3k3o_A 234 IHAVLTPVD 242 (371)
T ss_dssp EEEEEEEEE
T ss_pred eEEEecCCC
Confidence 999999743
No 157
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.03 E-value=0.17 Score=45.74 Aligned_cols=67 Identities=19% Similarity=0.296 Sum_probs=45.4
Q ss_pred EEEEcCCcc--cCCccCCCCCeEEEEEecEEEEEEEeCCC--------------------eEEEEEEcCCCEEEeCCCCe
Q 042644 75 RTDLDVDGM--VVPHTHPRASEMLFVFKGVVIAGFVDTNR--------------------QVFQVMLKAGEVCVFPRGLL 132 (205)
Q Consensus 75 ~~~l~pgg~--~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~--------------------~~~~~~l~~GDv~~vP~G~~ 132 (205)
.+-+.|+|. ++||+=+. .-++.-++|+=+..+..+.. ..++.+|++||++++|+|.+
T Consensus 167 N~Y~tp~Gs~g~~pH~D~~-DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~ 245 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYDDI-EAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFI 245 (489)
T ss_dssp EEEEECSSBCCSCCBCCSS-EEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCE
T ss_pred eEEecCCCcccccCccCCc-ceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCc
Confidence 344555553 57998743 33444556666666655421 12478999999999999999
Q ss_pred eEEEecCCcc
Q 042644 133 HFGFNVGYEF 142 (205)
Q Consensus 133 H~~~N~g~~~ 142 (205)
|+..+.+++.
T Consensus 246 H~~~s~~~~~ 255 (489)
T 4diq_A 246 HQAECQDGVH 255 (489)
T ss_dssp EEEEBCSSCC
T ss_pred eEEEecCCCc
Confidence 9999986443
No 158
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.01 E-value=0.034 Score=47.14 Aligned_cols=74 Identities=18% Similarity=0.213 Sum_probs=49.1
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEE--eC-------CCeEEEEEEcCCCEEEeCCCCeeEEEecCC
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFV--DT-------NRQVFQVMLKAGEVCVFPRGLLHFGFNVGY 140 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~--~~-------~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~ 140 (205)
.+..+|+.+.||+.+.||.=+ .|+.....|..++.+- +. +++ .+.+++|+++++....+|+..|.|+
T Consensus 90 ~l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~ 165 (290)
T 1e5r_A 90 HLQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSE 165 (290)
T ss_dssp SEEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSS
T ss_pred hhheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCC
Confidence 347788899999999999443 2555445666554432 21 233 6889999999999999999999987
Q ss_pred cc-EEEEE
Q 042644 141 EF-ATVFS 147 (205)
Q Consensus 141 ~~-a~~l~ 147 (205)
++ ..+++
T Consensus 166 ~~RIhLv~ 173 (290)
T 1e5r_A 166 ISRQSLCV 173 (290)
T ss_dssp SCCCEEEE
T ss_pred CCeEEEEE
Confidence 54 44443
No 159
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=94.79 E-value=0.11 Score=43.64 Aligned_cols=53 Identities=8% Similarity=0.070 Sum_probs=40.9
Q ss_pred EcCCccc-CCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEec
Q 042644 78 LDVDGMV-VPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNV 138 (205)
Q Consensus 78 l~pgg~~-~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~ 138 (205)
+.+|... ..-. ..-++++++|+..|.+ +++ .+.|++||.+.||+|..|.+...
T Consensus 214 ~G~Ges~~~~~~---~d~wiWqLEGss~Vt~---~~q--~~~L~~~DsLLIpa~~~y~~~r~ 267 (286)
T 2qnk_A 214 YGQGSSEGLRQN---VDVWLWQLEGSSVVTM---GGR--RLSLAPDDSLLVLAGTSYAWERT 267 (286)
T ss_dssp ECSEEEEECCCS---SCEEEEEEESCEEEEE---TTE--EEEECTTEEEEECTTCCEEEEEC
T ss_pred EcCCccccccCc---CcEEEEEEcCceEEEE---CCe--EEeccCCCEEEecCCCeEEEEec
Confidence 6666533 2222 2678999999998776 555 79999999999999999999753
No 160
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=94.75 E-value=0.09 Score=46.41 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=49.1
Q ss_pred cCCcccCCccCCCCCe-EEEEEecEEEEEEEeCC-------------------------CeEEEEEEcCCCEEEeCCCCe
Q 042644 79 DVDGMVVPHTHPRASE-MLFVFKGVVIAGFVDTN-------------------------RQVFQVMLKAGEVCVFPRGLL 132 (205)
Q Consensus 79 ~pgg~~~pH~Hp~a~E-i~yVl~G~~~v~~~~~~-------------------------~~~~~~~l~~GDv~~vP~G~~ 132 (205)
..|+..+.|+.+..+- +..+++|+=++.+.-|. .+.+...+++||+++||.|.+
T Consensus 183 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~ 262 (397)
T 3kv9_A 183 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 262 (397)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCe
Confidence 4466778899988764 45799999888887653 123578999999999999999
Q ss_pred eEEEecCC
Q 042644 133 HFGFNVGY 140 (205)
Q Consensus 133 H~~~N~g~ 140 (205)
|+..|..+
T Consensus 263 H~V~nled 270 (397)
T 3kv9_A 263 HAVLTSQD 270 (397)
T ss_dssp EEEEEEEE
T ss_pred EEccCCcC
Confidence 99999743
No 161
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=94.72 E-value=1.2 Score=36.10 Aligned_cols=134 Identities=12% Similarity=0.010 Sum_probs=85.3
Q ss_pred CCCCeeEEEeccCCCC-----CCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecE-EEEEEEeCCC----------
Q 042644 49 KFPYSSLTLVTAADFP-----GLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGV-VIAGFVDTNR---------- 112 (205)
Q Consensus 49 ~~~g~~~~~~~~~~~P-----~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~-~~v~~~~~~~---------- 112 (205)
+- ||+..+....... .-.....+...+-|.+|....+|.- ++.|+.+-..|. +++.++.+++
T Consensus 34 PE-GG~yrEt~Rs~~~v~~~~~~~R~~~TaIYfLL~~g~~S~~HRv-~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~ 111 (225)
T 3m3i_A 34 PE-GGYYSEVVRSAHKVDNEEGNRRHAYTTIYFLCTPESPSHLHRL-CSDETWMYHAGDPLQLHVILKDPQDEDRIAAQP 111 (225)
T ss_dssp TT-SSEEEEEEECSSEEECTTSCEEESCEEEEEEECSSSCEEEEEC-SSEEEEEEEEESCEEEEEEESSSTTTTC-----
T ss_pred CC-CceEEEEEECCCcccCCCCCCcccceeEEEEecCCCCcccEEe-cCCEEEEEECCCCEEEEEEcCCCcccccccccc
Confidence 44 8888887765432 1111235666677888886666655 688999999998 5777887776
Q ss_pred ------------------eEEEEEEcC----CC--EEEeCCCCeeEEEecCCc-----cEEEEEEEeCCCCceeeccccc
Q 042644 113 ------------------QVFQVMLKA----GE--VCVFPRGLLHFGFNVGYE-----FATVFSVLNSQNPGVVSISDAA 163 (205)
Q Consensus 113 ------------------~~~~~~l~~----GD--v~~vP~G~~H~~~N~g~~-----~a~~l~~~~s~~pg~~~~~~~~ 163 (205)
+....+|.+ |+ -++||+|.+...+..+++ ...+++.. -.||+..-...+
T Consensus 112 ~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCt--VaPGFdF~DFel 189 (225)
T 3m3i_A 112 PAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCI--VSPGFDYRDFEI 189 (225)
T ss_dssp -------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEE--EESCCCGGGCEE
T ss_pred cccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEE--EcCCccchhcEe
Confidence 455666644 66 689999998888766543 33333322 125543222222
Q ss_pred cCCCCCCHHHHHhhcCCCHHHHHHhhhc
Q 042644 164 FSDFDTIDDLVRKFIPFLCWTIRVSEMS 191 (205)
Q Consensus 164 f~~~~~~~evLa~af~v~~~~v~~l~~~ 191 (205)
++.+.|.+.|.--++.+++|...
T Consensus 190 -----~~~~~L~~~~P~~~~~I~~lt~~ 212 (225)
T 3m3i_A 190 -----FTQAQLMELYPQHEAVIKQMAYE 212 (225)
T ss_dssp -----CBHHHHHHHCGGGHHHHHHHSBC
T ss_pred -----cCHHHHHHHCchHHHHHHHhchh
Confidence 25677777777777888887653
No 162
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=94.53 E-value=0.11 Score=45.77 Aligned_cols=63 Identities=14% Similarity=0.189 Sum_probs=49.3
Q ss_pred EcCCcccCCccCCCCCe-EEEEEecEEEEEEEeCC-------------------------CeEEEEEEcCCCEEEeCCCC
Q 042644 78 LDVDGMVVPHTHPRASE-MLFVFKGVVIAGFVDTN-------------------------RQVFQVMLKAGEVCVFPRGL 131 (205)
Q Consensus 78 l~pgg~~~pH~Hp~a~E-i~yVl~G~~~v~~~~~~-------------------------~~~~~~~l~~GDv~~vP~G~ 131 (205)
-..|+....|.-+..+- +..+++|+=++.+.-|. .+.+..++++||+++||.|.
T Consensus 181 Gp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGW 260 (392)
T 3pua_A 181 CVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGW 260 (392)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCc
Confidence 35566788999987764 55799999888877553 12357899999999999999
Q ss_pred eeEEEecCC
Q 042644 132 LHFGFNVGY 140 (205)
Q Consensus 132 ~H~~~N~g~ 140 (205)
+|+.+|..+
T Consensus 261 wH~V~nled 269 (392)
T 3pua_A 261 IYATLTPVD 269 (392)
T ss_dssp EEEEEEEEE
T ss_pred eEEEecCCC
Confidence 999999743
No 163
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=94.51 E-value=0.099 Score=46.88 Aligned_cols=56 Identities=13% Similarity=0.107 Sum_probs=43.0
Q ss_pred CCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 85 VPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 85 ~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
..-++.+..|++++-+|++.+.-. =| ...+++||+++||+|+.+.+.-.+ +++.++
T Consensus 171 ~~f~NaDGD~Livpq~G~l~i~TE--fG---~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi 226 (471)
T 1eyb_A 171 RCFYNSDGDFLIVPQKGNLLIYTE--FG---KMLVQPNEICVIQRGMRFSIDVFE--ETRGYI 226 (471)
T ss_dssp EEEEESSEEEEEEEEESCEEEEET--TE---EEEECTTEEEEECTTCCEEEECSS--SEEEEE
T ss_pred ceeecCCCCEEEEEEeCCEEEEEe--cc---cEEeccCCEEEECCccEEEEeeCC--CceEEE
Confidence 344566888999999999987632 24 478999999999999999996554 665544
No 164
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=94.13 E-value=0.28 Score=41.36 Aligned_cols=73 Identities=15% Similarity=0.161 Sum_probs=54.2
Q ss_pred EEEEEEEcCCcccCCccCCCCCeEEEEE-ecEEEEEEEeCCCeEEEEEEcCCCEEEeCC--CCeeEEEecCCccEEEEEE
Q 042644 72 SVARTDLDVDGMVVPHTHPRASEMLFVF-KGVVIAGFVDTNRQVFQVMLKAGEVCVFPR--GLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 72 s~~~~~l~pgg~~~pH~Hp~a~Ei~yVl-~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~--G~~H~~~N~g~~~a~~l~~ 148 (205)
-+....+.|+.-+++|=|.+-.-+.||+ +|++.-. |+-|. ..++++||+=..-+ |..|.-+|..+++++.+=.
T Consensus 41 ~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQl 116 (290)
T 1j1l_A 41 LFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQL 116 (290)
T ss_dssp EEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEE
T ss_pred EEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEe--eCCCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEE
Confidence 4445567888778999995443466999 9998754 55555 58999999888865 6889999986677766543
No 165
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=93.87 E-value=0.36 Score=40.73 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=41.8
Q ss_pred ceEEEEEEEcCCcc---cCCccCCCCCeEEEEEe----cEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCcc
Q 042644 70 GLSVARTDLDVDGM---VVPHTHPRASEMLFVFK----GVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEF 142 (205)
Q Consensus 70 gis~~~~~l~pgg~---~~pH~Hp~a~Ei~yVl~----G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~ 142 (205)
.+-+..-.+.|||. .|||.|-+..|..|--+ |.+ +.+..+-++.....++-||++++|+|..|.. .|...
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v-~h~~g~pdEtrh~~V~n~daVlvP~wgyHp~--~Gt~~ 255 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRI-FHMMGKPDETKHLVMSNEQAAISPSWSIHSG--VGTSN 255 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCE-EEEESSTTSCEEEEECTTEEEEECTTSCCCE--EESSC
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeE-EEECCCCCceEEEEEECCCEEEeCCCcccCC--CCCcC
Confidence 45566677888873 59999977677766432 222 2223322343456889999999999999973 34444
Q ss_pred EEEEEEE
Q 042644 143 ATVFSVL 149 (205)
Q Consensus 143 a~~l~~~ 149 (205)
-.+|.+.
T Consensus 256 Y~ylwvM 262 (289)
T 1ywk_A 256 YSFIWAM 262 (289)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 3344433
No 166
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=93.82 E-value=0.31 Score=34.29 Aligned_cols=68 Identities=13% Similarity=-0.022 Sum_probs=47.6
Q ss_pred EEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 72 SVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 72 s~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
....-.+.||. .+....+.|+.-|++|++++.+- |...+.++++||.|.||++.---++-. ++...++
T Consensus 24 ~~TvGVm~pGe---ytF~T~~~E~M~vvsG~~~V~lp---g~~ew~~~~aGesF~Vpans~F~l~v~--~~~~YlC 91 (94)
T 2oyz_A 24 DVSVGVMLPGE---YTFGTQAPERMTVVKGALVVKRV---GEADWTTYSSGESFDVEGNSSFELQVK--DATAYLC 91 (94)
T ss_dssp EEEEEEECSEE---EEEEESSCEEEEEEESEEEEEET---TCSSCEEEETTCEEEECSSEEEEEEES--SCEEEEE
T ss_pred CEEEEEEeceE---EEEcCCCeEEEEEEEeEEEEEcC---CCCcCEEECCCCEEEECCCCEEEEEEc--ccEeEEE
Confidence 33344566664 23344578999999999999873 322379999999999999988777653 4444444
No 167
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=93.68 E-value=0.45 Score=37.95 Aligned_cols=77 Identities=14% Similarity=0.198 Sum_probs=51.8
Q ss_pred EEEEEEEcCCcccCCccCCCCCeEEEE----Eec-EEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 72 SVARTDLDVDGMVVPHTHPRASEMLFV----FKG-VVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 72 s~~~~~l~pgg~~~pH~Hp~a~Ei~yV----l~G-~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
++....+.||+.+.||..|....+-+- +.. ...+.+ +++ ....++|+++++--...|+..|.++++-+ +
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V---~~~--~~~w~eGe~~~fDds~~Hev~N~~d~~Rv-v 176 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRC---ANE--TKTWEEGKVLIFDDSFEHEVWQDASSFRL-I 176 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEE---TTE--EECCCBTCEEEECTTSCEEEEECSSSCEE-E
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEE---CCE--EEEeeCCcEEEEcCCeEEEEEECCCCCEE-E
Confidence 566678999999999999865444321 111 122221 233 67889999999999999999999887543 3
Q ss_pred EEEeCCCC
Q 042644 147 SVLNSQNP 154 (205)
Q Consensus 147 ~~~~s~~p 154 (205)
.+++--.|
T Consensus 177 L~~D~~rP 184 (197)
T 3rcq_A 177 FIVDVWHP 184 (197)
T ss_dssp EEEEEECT
T ss_pred EEEeeeCC
Confidence 34443333
No 168
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=93.22 E-value=0.18 Score=45.88 Aligned_cols=62 Identities=19% Similarity=0.181 Sum_probs=48.3
Q ss_pred EcCCcccCCccCCCCC-eEEEEEecEEEEEEEeCC-------------------------CeEEEEEEcCCCEEEeCCCC
Q 042644 78 LDVDGMVVPHTHPRAS-EMLFVFKGVVIAGFVDTN-------------------------RQVFQVMLKAGEVCVFPRGL 131 (205)
Q Consensus 78 l~pgg~~~pH~Hp~a~-Ei~yVl~G~~~v~~~~~~-------------------------~~~~~~~l~~GDv~~vP~G~ 131 (205)
-..|+....|.-+..+ -+.+|++|+=++.+.-|. ++....++++||+++||+|.
T Consensus 303 g~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW 382 (528)
T 3pur_A 303 GMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGW 382 (528)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCc
Confidence 3456677889887766 456799999888877653 12246899999999999999
Q ss_pred eeEEEecC
Q 042644 132 LHFGFNVG 139 (205)
Q Consensus 132 ~H~~~N~g 139 (205)
+|+.+|..
T Consensus 383 ~HaV~tle 390 (528)
T 3pur_A 383 IHAVLTPV 390 (528)
T ss_dssp EEEEEEEE
T ss_pred eEEEecCC
Confidence 99999973
No 169
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=92.60 E-value=0.48 Score=34.32 Aligned_cols=69 Identities=12% Similarity=-0.003 Sum_probs=49.3
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEE
Q 042644 75 RTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 75 ~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~ 149 (205)
.-.+.||. .|.+....+.|+.-|++|++++.+- |...+.++++|+.|.||.+.-.-++-. ++...++.+
T Consensus 41 lGVm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lp---g~~eW~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 41 LGVILPTE-QPLTFETHVPERMEIISGECRVKIA---DSTESELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp EEEECCCS-SCEEEECSSCEEEEEEESEEEEEET---TCSSCEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred EEEEeccc-cceEEcCCCcEEEEEEEeEEEEEcC---CcccCEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 34466763 2244555688999999999999873 322379999999999999988777643 455555543
No 170
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.20 E-value=0.49 Score=37.93 Aligned_cols=78 Identities=22% Similarity=0.154 Sum_probs=47.2
Q ss_pred EEEEEEcCCcccCCccCCCCC--eEEEEEe--cEEEEEEEeCC------------------CeEEEEEEcCCCEEEeCCC
Q 042644 73 VARTDLDVDGMVVPHTHPRAS--EMLFVFK--GVVIAGFVDTN------------------RQVFQVMLKAGEVCVFPRG 130 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~--Ei~yVl~--G~~~v~~~~~~------------------~~~~~~~l~~GDv~~vP~G 130 (205)
.-....++|+...+|.|+++. -++|+-. +.+.+.+.++. .......-++||+++||+-
T Consensus 105 ~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~ 184 (216)
T 2rg4_A 105 IWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESW 184 (216)
T ss_dssp EEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETT
T ss_pred EEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCC
Confidence 344567899999999998753 2334432 22334444442 1112456699999999999
Q ss_pred CeeEEEecCCccEEEEEEEe
Q 042644 131 LLHFGFNVGYEFATVFSVLN 150 (205)
Q Consensus 131 ~~H~~~N~g~~~a~~l~~~~ 150 (205)
+.|...-...+.-++-.+||
T Consensus 185 l~H~V~p~~~~~~RiSIsFN 204 (216)
T 2rg4_A 185 LRHEVPMNMAEEDRISVSFN 204 (216)
T ss_dssp SCEEECCCCSSSCEEEEEEE
T ss_pred CEEeccCCCCCCCEEEEEEE
Confidence 99998643332223333444
No 171
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=92.13 E-value=3.1 Score=31.76 Aligned_cols=89 Identities=15% Similarity=0.058 Sum_probs=61.7
Q ss_pred CCCCeeEEEeccCCCCCCCccceEEEEEEEcCCcccCCccCCCCCeEEEEEecE-EEEEEEeCCCeEEEEEEc----CCC
Q 042644 49 KFPYSSLTLVTAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGV-VIAGFVDTNRQVFQVMLK----AGE 123 (205)
Q Consensus 49 ~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~-~~v~~~~~~~~~~~~~l~----~GD 123 (205)
+- ||+.++.......+-+ .-.+....-|.+|.....|.--++.|+.+-..|. +++.+..+++.....+|. +|+
T Consensus 20 PE-GG~yrEt~Rs~~~~~R-~~~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge 97 (154)
T 1znp_A 20 PE-GGFYHQTFRDKAGGER-GHSTAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGE 97 (154)
T ss_dssp TT-SSEEEEEEECSSSTTT-CSCEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTE
T ss_pred CC-CccEEEEEeCCCCCCC-cceeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCc
Confidence 44 8888887766432222 2345566667777765555533589999999998 777788777765566664 465
Q ss_pred --EEEeCCCCeeEEEecC
Q 042644 124 --VCVFPRGLLHFGFNVG 139 (205)
Q Consensus 124 --v~~vP~G~~H~~~N~g 139 (205)
-++||+|.+...+..|
T Consensus 98 ~pQ~vVP~G~WqaA~~~g 115 (154)
T 1znp_A 98 RPQVIVPANCWQSAESLG 115 (154)
T ss_dssp ESEEEECTTCEEEEEESS
T ss_pred ccEEEEcCCEEEEeeECC
Confidence 4899999998887654
No 172
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=91.78 E-value=0.78 Score=38.54 Aligned_cols=77 Identities=23% Similarity=0.329 Sum_probs=49.7
Q ss_pred ceEEEEEEEcCCc---ccCCccCCCCCeEEEEEe----cEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCcc
Q 042644 70 GLSVARTDLDVDG---MVVPHTHPRASEMLFVFK----GVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEF 142 (205)
Q Consensus 70 gis~~~~~l~pgg---~~~pH~Hp~a~Ei~yVl~----G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~ 142 (205)
.+-+..-.+.||| ..|||.|-+..|..|--+ |.+ +.++.+.++.....++-||++++|...+|.. .|.+.
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv-~q~~g~p~Etrhi~V~n~daVlvP~wh~h~~--~G~~~ 255 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACV-FHMMGQPQETRHIVMHNEQAVISPSWSIHSG--VGTKA 255 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCE-EEEEEETTEEEEEEECSSEEEEECTTCEEEE--EESSC
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEE-EEEeCCCCCeeEEEEECCCEEEeCCCCCCCC--CCccc
Confidence 4556667788887 359999976666666443 433 3333333444456789999999996667764 46666
Q ss_pred EEEEEEE
Q 042644 143 ATVFSVL 149 (205)
Q Consensus 143 a~~l~~~ 149 (205)
-.+|.+.
T Consensus 256 Y~ylwvM 262 (282)
T 1xru_A 256 YTFIWGM 262 (282)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 5444433
No 173
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=91.55 E-value=3.3 Score=33.08 Aligned_cols=109 Identities=17% Similarity=0.120 Sum_probs=68.6
Q ss_pred eEEEEEEEcCCc-ccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcC----CC--EEEeCCCCeeEEEec-CCcc
Q 042644 71 LSVARTDLDVDG-MVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKA----GE--VCVFPRGLLHFGFNV-GYEF 142 (205)
Q Consensus 71 is~~~~~l~pgg-~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~----GD--v~~vP~G~~H~~~N~-g~~~ 142 (205)
.+....-|.+++ ....|.- ++.|+.+-..|.....++.++++....+|.+ |+ -++||+|.+...+.. +.+-
T Consensus 79 ~TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~ 157 (203)
T 1xe7_A 79 STLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEF 157 (203)
T ss_dssp CEEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTT
T ss_pred eeEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCc
Confidence 466666688886 5777766 7899999999976666777888766677754 54 589999999887654 2222
Q ss_pred --EEEEEEEeCCCCceeeccccccCCCCCCHH-HHHhhcCCCHHHHHHhh
Q 042644 143 --ATVFSVLNSQNPGVVSISDAAFSDFDTIDD-LVRKFIPFLCWTIRVSE 189 (205)
Q Consensus 143 --a~~l~~~~s~~pg~~~~~~~~f~~~~~~~e-vLa~af~v~~~~v~~l~ 189 (205)
..++... -.||+..-...++ +.+ .|.+.|. ++.++.|+
T Consensus 158 ~~~tLVgCt--VaPGFdF~dFel~-----~~~~~L~~~~P--~~~~~~l~ 198 (203)
T 1xe7_A 158 DNGFLISEV--VVPGFDFEDHTFL-----KGEDELKHLVG--PEKAAELA 198 (203)
T ss_dssp TTCEEEEEE--ESSCCCGGGEEEC-----CHHHHHHHHHC--HHHHHHTG
T ss_pred ccceEEEEE--ecCCccchhcEec-----CCcHHHHHHCC--HHHHHHHH
Confidence 1333322 2355433222222 344 5555554 66776654
No 174
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=91.54 E-value=1.2 Score=37.80 Aligned_cols=57 Identities=18% Similarity=0.297 Sum_probs=41.6
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHF 134 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~ 134 (205)
-+++.++++..+... ...+...++.|++|++.+.. +++ ...|++||.+++|++.-.+
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~~~ 306 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMPDF 306 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCCCE
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCceE
Confidence 467778887644322 22256789999999999864 344 5789999999999986433
No 175
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=91.49 E-value=0.81 Score=40.79 Aligned_cols=77 Identities=16% Similarity=0.065 Sum_probs=48.1
Q ss_pred ceEEEEEEEc--CCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEec---CCccEE
Q 042644 70 GLSVARTDLD--VDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNV---GYEFAT 144 (205)
Q Consensus 70 gis~~~~~l~--pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~---g~~~a~ 144 (205)
.+++.++++. ++.....-.+ ....++.|++|++++.. .+++.....|++||+++||++..-.+.+. +.+.+.
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~-~~~~illv~~G~g~i~~--~~~~~~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~ 432 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGL-NGPSIVIATNGKGTIQI--TGDDSTKQKIDTGYVFFVAPGSSIELTADSANQDQDFT 432 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCC-SSCEEEEEEESEEEEEE--TTCGGGCEEEETTCEEEECTTCCEEEEECSSCCSSCCE
T ss_pred eEEEEEEEecCCCCceeEEecC-CCcEEEEEEeCeEEEEe--CCcccceEEeccCCEEEEeCCCcEEEEEecccCCCcEE
Confidence 5788888887 3422211112 46789999999999864 12210015899999999999954444544 144555
Q ss_pred EEEEE
Q 042644 145 VFSVL 149 (205)
Q Consensus 145 ~l~~~ 149 (205)
++.++
T Consensus 433 ~~~a~ 437 (440)
T 1pmi_A 433 TYRAF 437 (440)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55443
No 176
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=91.25 E-value=0.92 Score=32.54 Aligned_cols=57 Identities=18% Similarity=-0.030 Sum_probs=43.1
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEe
Q 042644 75 RTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFN 137 (205)
Q Consensus 75 ~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N 137 (205)
.-.+.||. .+....+.|+.-|++|++++.+- |...+.++++|+.|.||++.-.-++-
T Consensus 40 lGVm~PGe---Y~F~T~~~E~MevvsG~l~V~Lp---G~~eW~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 40 LTLLHPGV---YTLSSEVAETIRVLSGMAYYHAE---GANDVQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EEEECSEE---EEECCSSCEEEEEEEEEEEEECT---TCSSCEEEETTCEEEECSSSCEEEEE
T ss_pred EEEEeeeE---EEecCCCcEEEEEEEeEEEEECC---CCccCEEECCCCEEEECCCCcEEEEE
Confidence 33456663 34555688999999999998873 32237999999999999998777654
No 177
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=90.95 E-value=2.8 Score=35.20 Aligned_cols=101 Identities=11% Similarity=0.049 Sum_probs=59.8
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
...+.+..+.|++|+.......+...-++||++|++.+. .+.. ...+.++.+++...|..-.+.+.+.++++++.
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~---g~~~--~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LL 240 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG---PDDA--QQKIEPHHTAVLGEGDSVQVENKDPKRSHFVL 240 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES---CTTS--CEEECTTEEEEECSCSEEEEECCSSSCEEEEE
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC---Cccc--ceeccCceEEEecCCCEEEEEEcCCCCcEEEE
Confidence 446888999999999663333333456889999999863 1111 14566777777777766556554456777665
Q ss_pred EEeCC--CCceeeccccccCCCCCCHHHHHhhc
Q 042644 148 VLNSQ--NPGVVSISDAAFSDFDTIDDLVRKFI 178 (205)
Q Consensus 148 ~~~s~--~pg~~~~~~~~f~~~~~~~evLa~af 178 (205)
+-..+ .|-.+.. .-+. -+.|-|++|+
T Consensus 241 l~G~Pl~epi~~~g-pFVm----nt~eeI~qA~ 268 (290)
T 1j1l_A 241 IAGEPLREPVIQHG-PFVM----NTNEEISQAI 268 (290)
T ss_dssp EEECCCCSCCEEET-TEEE----SSHHHHHHHH
T ss_pred EEcccCCCCEEecC-Ceee----CCHHHHHHHH
Confidence 54333 2222221 1122 2567777665
No 178
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=90.70 E-value=1.1 Score=32.73 Aligned_cols=62 Identities=18% Similarity=0.190 Sum_probs=43.1
Q ss_pred CcccCCccCCCCC--eEEEEEecEEEEEEEeCCCe---EEEEEEcCCCEEEeCCCCeeEEEecCCccEEE
Q 042644 81 DGMVVPHTHPRAS--EMLFVFKGVVIAGFVDTNRQ---VFQVMLKAGEVCVFPRGLLHFGFNVGYEFATV 145 (205)
Q Consensus 81 gg~~~pH~Hp~a~--Ei~yVl~G~~~v~~~~~~~~---~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~ 145 (205)
-++...|.- .+- ..+-|++|++.+...++++. .....+.+|+.-++|+..+|.+.- ++++.+
T Consensus 26 ~~l~~~HnT-K~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~--sdD~~f 92 (119)
T 3dl3_A 26 EALLTHHNT-AVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIEL--SDDAQF 92 (119)
T ss_dssp HHHHSSBCC-CTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEE--CTTCEE
T ss_pred HHHHhccCC-CCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEE--CCCeEE
Confidence 345555644 332 45579999999887664432 235688999999999999999994 344444
No 179
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=90.02 E-value=0.8 Score=35.26 Aligned_cols=125 Identities=7% Similarity=0.049 Sum_probs=77.0
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeC-----CC--CeeEEEecCCccEEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFP-----RG--LLHFGFNVGYEFATV 145 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP-----~G--~~H~~~N~g~~~a~~ 145 (205)
....+++|..+-..-. ....+++|++|.+.+...+++|+ .....+.+||++.+. .+ ....... .+++.+
T Consensus 27 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a--~~~~~~ 103 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNM-DCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEA--EKDTDL 103 (220)
T ss_dssp EEEEECTTCEEEEGGG-CCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEE--SSCEEE
T ss_pred ceEEeCCCCEEECCCC-CcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEE--eeeeEE
Confidence 3566777775533222 34689999999999998887765 345678999996321 22 2223333 345555
Q ss_pred EEEEe-------CCCCceeec----------------------------cc------cccC--CCCCCHHHHHhhcCCCH
Q 042644 146 FSVLN-------SQNPGVVSI----------------------------SD------AAFS--DFDTIDDLVRKFIPFLC 182 (205)
Q Consensus 146 l~~~~-------s~~pg~~~~----------------------------~~------~~f~--~~~~~~evLa~af~v~~ 182 (205)
+.+-. ..+|..... +. ...+ .-.++.+.||..+|+++
T Consensus 104 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr 183 (220)
T 3dv8_A 104 WIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSHR 183 (220)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTCCH
T ss_pred EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCCCH
Confidence 44321 123322110 00 0111 01578999999999999
Q ss_pred HHHHHhhhcCCCcccEEEe
Q 042644 183 WTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 183 ~~v~~l~~~~~~~~~i~i~ 201 (205)
+++.++.+.-.+.|-|.+-
T Consensus 184 ~tvsR~l~~L~~~g~I~~~ 202 (220)
T 3dv8_A 184 EVITRMLRYFQVEGLVKLS 202 (220)
T ss_dssp HHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHHCCCEEeC
Confidence 9999999988888877654
No 180
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=89.99 E-value=0.82 Score=40.14 Aligned_cols=57 Identities=18% Similarity=0.288 Sum_probs=41.5
Q ss_pred ceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHF 134 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~ 134 (205)
-+++.++++.++... ..+ +...++.|++|++++.. +++ ...|++||.++||++..-+
T Consensus 323 ~F~v~~~~l~~~~~~--~~~-~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~fvpa~~~~~ 379 (394)
T 2wfp_A 323 DFAFSLHDLALQETS--IGQ-HSAAILFCVEGEAVLRK---DEQ--RLVLKPGESAFIGADESPV 379 (394)
T ss_dssp SCEEEEEECCSSCEE--ECC-SSCEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECGGGCCE
T ss_pred EEEEEEEEEcCCeEE--ecC-CCcEEEEEEeceEEEEE---CCe--EEEEccCcEEEEeCCCceE
Confidence 578888888755322 133 55699999999998653 333 5799999999999985333
No 181
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=89.34 E-value=1.5 Score=36.54 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=48.3
Q ss_pred ccceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCC-C----CeeEEEecCCcc
Q 042644 68 TLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPR-G----LLHFGFNVGYEF 142 (205)
Q Consensus 68 ~~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~-G----~~H~~~N~g~~~ 142 (205)
...+.+..+.|++|+.......+...-++||++|++.+. +. ...+.+||.+++.. | ..-.+.+. ++
T Consensus 164 ~~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~-----g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~~ 234 (277)
T 2p17_A 164 IVPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG-----AD--NIEGKAGQALFFSRHNRGEETELNVTAR--EK 234 (277)
T ss_dssp SSCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-----TT--TEEEETTEEEEECCCCTTCEEEEEEEES--SS
T ss_pred CCCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-----CC--ceEeCCCcEEEEcCCCCCccceEEEEeC--CC
Confidence 447889999999999663333223346899999998762 31 14699999999985 6 43344443 35
Q ss_pred EEEEEEE
Q 042644 143 ATVFSVL 149 (205)
Q Consensus 143 a~~l~~~ 149 (205)
++++.+-
T Consensus 235 a~~Ll~~ 241 (277)
T 2p17_A 235 LRLLLYA 241 (277)
T ss_dssp EEEEEEE
T ss_pred cEEEEEe
Confidence 6655443
No 182
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=89.11 E-value=1.6 Score=35.69 Aligned_cols=69 Identities=16% Similarity=-0.013 Sum_probs=47.7
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
..+.+..+.+++|+....-..++..-++||++|++.+ ++ ..+.+||.+++..+..-.+.+ .++++++.+
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v-----~g----~~l~~gd~~~~~~~~~l~l~a--~~~a~~Ll~ 226 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTI-----NG----VKASTSDGLAIWDEQAISIHA--DSDSEVLLF 226 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEE-----TT----EEEETTCEEEEESCSCEEEEE--SSSEEEEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEE-----CC----EEeCCCCEEEECCCCeEEEEe--CCCCEEEEE
Confidence 4678888999999866333333445678999999986 23 369999999997765445544 345655543
No 183
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=86.91 E-value=4.2 Score=33.45 Aligned_cols=72 Identities=11% Similarity=-0.063 Sum_probs=47.7
Q ss_pred cceEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEE
Q 042644 69 LGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 69 ~gis~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~ 147 (205)
..+.+..+.+++|.........+. -++||++|++.+. ..++ ....|.+||.+++-.+..-.+.+ .++++++.
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~~--~~~~l~~gd~~~l~~~~~l~l~a--~~~a~~LL 251 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THHE--EKAALTCGDGAFIRDEANITLVA--DSPLRALL 251 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETTE--EEEEECTTCEEEEESCSEEEEEE--SSSEEEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Cccc--cceEECCCCEEEECCCCeEEEEe--CCCCEEEE
Confidence 467888899999986644333333 6889999999874 2111 13679999999997665444444 24555543
No 184
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=86.87 E-value=3.4 Score=34.71 Aligned_cols=56 Identities=14% Similarity=0.271 Sum_probs=40.2
Q ss_pred ceEEEEEEEcCCcccCCccCCCCC-eEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEE
Q 042644 70 GLSVARTDLDVDGMVVPHTHPRAS-EMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFG 135 (205)
Q Consensus 70 gis~~~~~l~pgg~~~pH~Hp~a~-Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~ 135 (205)
-+++.++++...... .. +.. .++.|++| +++.. +++ ...+++||.+++|++.-.+.
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~---~~~--~~~l~~G~~~~ipa~~~~~~ 285 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILR---GKE--TADLHRGYSCLVPASTDSFT 285 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEE---SSS--EEEECTTCEEEECTTCCEEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEe---CCe--EEEEccceEEEEeCCCceEE
Confidence 477888887643222 23 566 89999999 88764 344 46899999999999875444
No 185
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=85.56 E-value=0.89 Score=39.84 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=24.4
Q ss_pred EEEEEcCCCEEEeCCCCeeEEEecCCcc
Q 042644 115 FQVMLKAGEVCVFPRGLLHFGFNVGYEF 142 (205)
Q Consensus 115 ~~~~l~~GDv~~vP~G~~H~~~N~g~~~ 142 (205)
++..-++||.++||+|.+|...|..+.-
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~~i 320 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHSCI 320 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSEEE
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccchh
Confidence 5678899999999999999999987543
No 186
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=83.93 E-value=2.8 Score=29.66 Aligned_cols=53 Identities=9% Similarity=0.070 Sum_probs=37.5
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEe
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVF 127 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~v 127 (205)
....+++|..+-..-- .+..+++|++|.+.+...+++|+ .....+.+||++-.
T Consensus 29 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~ 82 (149)
T 2pqq_A 29 SEVTLARGDTLFHEGD-PGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGE 82 (149)
T ss_dssp EEEEECTTCEEECTTS-EECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESG
T ss_pred eEEEeCCCCEEECCCC-CCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEech
Confidence 4567788876533222 34679999999999988876665 44678899998743
No 187
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=83.50 E-value=15 Score=30.51 Aligned_cols=70 Identities=7% Similarity=-0.030 Sum_probs=47.2
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEE-EEEecEEEEEEEeCCCeEEEEEEcC--------CCEEEeCCCCeeEEEecCCc
Q 042644 71 LSVARTDLDVDGMVVPHTHPRASEML-FVFKGVVIAGFVDTNRQVFQVMLKA--------GEVCVFPRGLLHFGFNVGYE 141 (205)
Q Consensus 71 is~~~~~l~pgg~~~pH~Hp~a~Ei~-yVl~G~~~v~~~~~~~~~~~~~l~~--------GDv~~vP~G~~H~~~N~g~~ 141 (205)
+++..+.|++|.......- + .|+. +.+.|.+.+.+ +++.+...-+. .|.+++|+|.--.+...+
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~-~-~E~~iv~l~G~~~V~~---~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~-- 101 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSD-E-RERCLVLVAGLASVXA---ADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET-- 101 (270)
T ss_dssp CEEEEEEECTTCEEEECCS-S-EEEEEEEEESCEEEEE---TTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS--
T ss_pred eEEEEEEecCCCEEEecCC-C-cEEEEEEecceEEEEE---CCEEEeccccccccccCCCCcEEEECCCCEEEEEecC--
Confidence 6788889999998777655 3 4665 56799999886 45532221233 599999999966666544
Q ss_pred cEEEEE
Q 042644 142 FATVFS 147 (205)
Q Consensus 142 ~a~~l~ 147 (205)
++++..
T Consensus 102 ~~~~~v 107 (270)
T 2qjv_A 102 DLELAV 107 (270)
T ss_dssp SEEEEE
T ss_pred CceEEE
Confidence 455543
No 188
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=82.27 E-value=4.9 Score=30.09 Aligned_cols=52 Identities=12% Similarity=0.008 Sum_probs=37.1
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCV 126 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~ 126 (205)
....+++|..+-.- ...+..+++|++|.+.+...+++|+ .....+.+||++-
T Consensus 31 ~~~~~~~g~~l~~~-G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLKT-GEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEECC-CCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 35567777754222 1234689999999999998877775 3456789999986
No 189
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=81.99 E-value=2.9 Score=29.37 Aligned_cols=53 Identities=8% Similarity=0.188 Sum_probs=32.9
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EE---EEEEcCCCEEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VF---QVMLKAGEVCV 126 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~---~~~l~~GDv~~ 126 (205)
+....+.+|..+-.- ...+..+++|++|.+.+...+++++ .. ...+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKE-NSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECT-TSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeC-CCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 345667787754322 2235689999999999887665554 33 56789999884
No 190
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=81.89 E-value=6.3 Score=29.71 Aligned_cols=52 Identities=13% Similarity=0.072 Sum_probs=37.8
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVC 125 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~ 125 (205)
+....+.+|..+-.-=- .+..+++|++|.+.+...+++|+ .....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~-~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGD-PGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCC-CCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 44566788875533222 35689999999999998887775 345688999987
No 191
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=81.46 E-value=5.5 Score=29.98 Aligned_cols=124 Identities=10% Similarity=0.073 Sum_probs=75.3
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeCC---C------CeeEEEecCCccEE
Q 042644 75 RTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFPR---G------LLHFGFNVGYEFAT 144 (205)
Q Consensus 75 ~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP~---G------~~H~~~N~g~~~a~ 144 (205)
...+++|..+-.- ......+++|++|.+.+...+++|+ .....+.+||++-... + ..+.... .+++.
T Consensus 15 ~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A--~~~~~ 91 (207)
T 2oz6_A 15 RRRYTAKSTIIYA-GDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRA--KVECE 91 (207)
T ss_dssp EEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEE--SSCEE
T ss_pred eEEECCCCEEEcC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEE--CCcEE
Confidence 4567777755322 2234679999999999998877665 4557889999985432 1 2223333 34444
Q ss_pred EEEEEe-------CCCCceeec----------------------------ccccc---CC-----------CCCCHHHHH
Q 042644 145 VFSVLN-------SQNPGVVSI----------------------------SDAAF---SD-----------FDTIDDLVR 175 (205)
Q Consensus 145 ~l~~~~-------s~~pg~~~~----------------------------~~~~f---~~-----------~~~~~evLa 175 (205)
++.+-. ..+|..... +..+. .. -.++.+.||
T Consensus 92 v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA 171 (207)
T 2oz6_A 92 VAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIG 171 (207)
T ss_dssp EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHHH
T ss_pred EEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceecccCHHHHH
Confidence 443221 123322110 00010 00 037889999
Q ss_pred hhcCCCHHHHHHhhhcCCCcccEEEe
Q 042644 176 KFIPFLCWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 176 ~af~v~~~~v~~l~~~~~~~~~i~i~ 201 (205)
..+|++++++.++.+.-.+.|-|.+-
T Consensus 172 ~~lg~sr~tvsR~l~~l~~~g~I~~~ 197 (207)
T 2oz6_A 172 RIVGCSREMVGRVLKSLEEQGLVHVK 197 (207)
T ss_dssp HHHTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHhCCCHHHHHHHHHHHHHCCCEEec
Confidence 99999999999999888888877654
No 192
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=81.28 E-value=6.1 Score=28.65 Aligned_cols=51 Identities=4% Similarity=-0.073 Sum_probs=35.5
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVC 125 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~ 125 (205)
+....+.+|..+-.- ...+..+++|++|.+.+.. +.+|+ .....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQ-GDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeC-CCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 345677888755332 2245689999999999987 54554 445678999976
No 193
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=80.94 E-value=5.2 Score=30.39 Aligned_cols=126 Identities=11% Similarity=-0.021 Sum_probs=77.6
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeC-----CCCeeEEEecCCccEEEEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFP-----RGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP-----~G~~H~~~N~g~~~a~~l~ 147 (205)
....+++|..+-..-. ....+++|++|.+.+...+++|+ .....+.+||++-.. .-..+.... .+++.++.
T Consensus 23 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a--~~~~~v~~ 99 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGD-LGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVA--VEDTELLA 99 (216)
T ss_dssp EEEEECTTCEEECTTC-BCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEE--SSSEEEEE
T ss_pred eEEEeCCCCEEEeCCC-CCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEE--cCCEEEEE
Confidence 3556777775533222 35689999999999998877765 455788999988431 112233333 34454443
Q ss_pred EEe-------CCCCceeec----------------------------ccccc-----C---CCCCCHHHHHhhcCCCHHH
Q 042644 148 VLN-------SQNPGVVSI----------------------------SDAAF-----S---DFDTIDDLVRKFIPFLCWT 184 (205)
Q Consensus 148 ~~~-------s~~pg~~~~----------------------------~~~~f-----~---~~~~~~evLa~af~v~~~~ 184 (205)
+-. ..+|..... +..+. + ...++.+.||..+|+++++
T Consensus 100 i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 179 (216)
T 4ev0_A 100 LFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRET 179 (216)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHHH
T ss_pred EcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHHH
Confidence 321 123322110 01110 0 0147899999999999999
Q ss_pred HHHhhhcCCCcccEEEee
Q 042644 185 IRVSEMSHFQDNKLKIMK 202 (205)
Q Consensus 185 v~~l~~~~~~~~~i~i~~ 202 (205)
+.++.+.-.+.|-|.+-+
T Consensus 180 vsR~l~~l~~~g~I~~~~ 197 (216)
T 4ev0_A 180 VSRVLHALAEEGVVRLGP 197 (216)
T ss_dssp HHHHHHHHHHTTSEEEET
T ss_pred HHHHHHHHHHCCCEEecC
Confidence 999999888888776543
No 194
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=80.57 E-value=5.5 Score=30.81 Aligned_cols=119 Identities=8% Similarity=-0.029 Sum_probs=71.9
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeC-----CCCeeEEEecCCccEEEEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFP-----RGLLHFGFNVGYEFATVFS 147 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP-----~G~~H~~~N~g~~~a~~l~ 147 (205)
....+.+|..+-.--. ....+++|++|.+.+...+++|+ .....+.+||++-.. .-....... .+++.++.
T Consensus 35 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a--~~~~~v~~ 111 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEE-KAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEA--VTPCEVMH 111 (237)
T ss_dssp EEEEECTTCEEECTTS-CCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEE--SSSEEEEE
T ss_pred EEEEECCCCEEEcCCC-ccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEE--CCceEEEE
Confidence 4566777775533222 35689999999999998877765 445688999988432 112223333 24454443
Q ss_pred EEe-------CCCCceeec----------------------------ccc------------ccCCCCCCHHHHHhhcCC
Q 042644 148 VLN-------SQNPGVVSI----------------------------SDA------------AFSDFDTIDDLVRKFIPF 180 (205)
Q Consensus 148 ~~~-------s~~pg~~~~----------------------------~~~------------~f~~~~~~~evLa~af~v 180 (205)
+-. ..+|..... +.. .+.. .++.+.||...|+
T Consensus 112 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~~~~~~~~l-~~t~~~iA~~lg~ 190 (237)
T 3fx3_A 112 IPSPVFVSLMRRDPEICISILATTFGHLHSLVAQLEQLKAQTGAQRVAEFLLELCDCDTGACEVTL-PYDKMLIAGRLGM 190 (237)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC-----EEEC-CSCTHHHHHHTTC
T ss_pred EcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCCCeEEEe-cCCHHHHHHHhCC
Confidence 221 122322110 000 1111 3558999999999
Q ss_pred CHHHHHHhhhcCCCcc
Q 042644 181 LCWTIRVSEMSHFQDN 196 (205)
Q Consensus 181 ~~~~v~~l~~~~~~~~ 196 (205)
+++++.++.+.-.+.|
T Consensus 191 sr~tvsR~l~~L~~~g 206 (237)
T 3fx3_A 191 KPESLSRAFSRLKAAG 206 (237)
T ss_dssp CHHHHHHHHHHHGGGT
T ss_pred CHHHHHHHHHHHHHCC
Confidence 9999999998777666
No 195
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=80.50 E-value=1.2 Score=37.51 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=33.7
Q ss_pred CeEEEEEe-cEEEEEEEeCC-----------Ce------EEEEEEcCCCEEEeCCCCeeEEE
Q 042644 93 SEMLFVFK-GVVIAGFVDTN-----------RQ------VFQVMLKAGEVCVFPRGLLHFGF 136 (205)
Q Consensus 93 ~Ei~yVl~-G~~~v~~~~~~-----------~~------~~~~~l~~GDv~~vP~G~~H~~~ 136 (205)
+|+.|+++ .++.+|+-... +. +....|++||.+++|+|.+|..-
T Consensus 118 pE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 118 ESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred cEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 69999997 55666653211 22 45789999999999999999984
No 196
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=80.12 E-value=6.6 Score=29.60 Aligned_cols=125 Identities=10% Similarity=0.082 Sum_probs=77.1
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeCC----C--CeeEEEecCCccEEEEE
Q 042644 75 RTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFPR----G--LLHFGFNVGYEFATVFS 147 (205)
Q Consensus 75 ~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP~----G--~~H~~~N~g~~~a~~l~ 147 (205)
...+++|..+-..-- ....+++|++|.+.+...+++|+ .....+.+||++-... + ....... .+++.++.
T Consensus 21 ~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a--~~~~~v~~ 97 (210)
T 3ryp_A 21 IHKYPSKSTLIHQGE-KAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRA--KTACEVAE 97 (210)
T ss_dssp EEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEE--SSCEEEEE
T ss_pred EEEeCCCCEEECCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEE--CCcEEEEE
Confidence 456777775433222 35689999999999998877765 3456789999985332 1 2223333 34555444
Q ss_pred EEe-------CCCCceeec----------------------------ccccc---CC-----------CCCCHHHHHhhc
Q 042644 148 VLN-------SQNPGVVSI----------------------------SDAAF---SD-----------FDTIDDLVRKFI 178 (205)
Q Consensus 148 ~~~-------s~~pg~~~~----------------------------~~~~f---~~-----------~~~~~evLa~af 178 (205)
+-. ..+|..... +..+. .. -.++.+.||...
T Consensus 98 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~iA~~l 177 (210)
T 3ryp_A 98 ISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIV 177 (210)
T ss_dssp EEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHHHHHH
T ss_pred EcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCcCCCCCceEeccCHHHHHHHh
Confidence 321 123432210 00000 00 046889999999
Q ss_pred CCCHHHHHHhhhcCCCcccEEEee
Q 042644 179 PFLCWTIRVSEMSHFQDNKLKIMK 202 (205)
Q Consensus 179 ~v~~~~v~~l~~~~~~~~~i~i~~ 202 (205)
|++++++.++.+.-.+.|-|.+-+
T Consensus 178 g~sr~tvsR~l~~L~~~g~I~~~~ 201 (210)
T 3ryp_A 178 GCSRETVGRILKMLEDQNLISAHG 201 (210)
T ss_dssp TCCHHHHHHHHHHHHHTTSEEEET
T ss_pred CCcHHHHHHHHHHHHHCCcEEeCC
Confidence 999999999999888888776644
No 197
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=78.91 E-value=1.5 Score=37.32 Aligned_cols=43 Identities=26% Similarity=0.464 Sum_probs=31.4
Q ss_pred CCeEEEEEec----EEEEEEEeCCC------------e----EEEEEEcCCCEEEeCCCCeeEEE
Q 042644 92 ASEMLFVFKG----VVIAGFVDTNR------------Q----VFQVMLKAGEVCVFPRGLLHFGF 136 (205)
Q Consensus 92 a~Ei~yVl~G----~~~v~~~~~~~------------~----~~~~~l~~GDv~~vP~G~~H~~~ 136 (205)
-+|+.|+++. ++.++ .++- . +....|++||.+++|+|.+|..-
T Consensus 117 KpE~~y~L~~~~~~~~~~G--~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 117 KTECWYIIDCKENAEIIYG--HTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCEEEEEEEECTTCEEEEE--ECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEEC
T ss_pred CCEEEEEccCCCchhheeC--CCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEec
Confidence 4799999985 34444 2110 0 14689999999999999999974
No 198
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=78.87 E-value=7.4 Score=29.84 Aligned_cols=123 Identities=7% Similarity=0.068 Sum_probs=76.4
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeC-----CCCeeEEEecCCccEEEEEE
Q 042644 75 RTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFP-----RGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 75 ~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP-----~G~~H~~~N~g~~~a~~l~~ 148 (205)
...+++|..+-.--- .+..+++|++|.+.+...+++|+ .....+.+||++-.. ....+..... +++.++.+
T Consensus 31 ~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~~i 107 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGE-PGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTI--TEVRAVSM 107 (227)
T ss_dssp EEEECTTCEEECTTC-CCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEES--SCEEEEEE
T ss_pred EEEeCCCCEEEcCCC-cCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEc--ccEEEEEE
Confidence 556777775533222 35679999999999998877665 345688999988421 1222334433 44544433
Q ss_pred Ee-------CCCCceeec----------------------------cc----------------cccCCCCCCHHHHHhh
Q 042644 149 LN-------SQNPGVVSI----------------------------SD----------------AAFSDFDTIDDLVRKF 177 (205)
Q Consensus 149 ~~-------s~~pg~~~~----------------------------~~----------------~~f~~~~~~~evLa~a 177 (205)
-. ..+|..... +. ..+.. .++.+.||..
T Consensus 108 ~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~-~~t~~~lA~~ 186 (227)
T 3d0s_A 108 DRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTH-DLTQEEIAQL 186 (227)
T ss_dssp EHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHEEEETTEEEEEC-CCCHHHHHHH
T ss_pred eHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCcCCCceEEcC-CCCHHHHHHH
Confidence 21 233332110 00 01111 4789999999
Q ss_pred cCCCHHHHHHhhhcCCCcccEEEe
Q 042644 178 IPFLCWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 178 f~v~~~~v~~l~~~~~~~~~i~i~ 201 (205)
.|++++++.++.+.-.+.|-|.+-
T Consensus 187 lg~sr~tvsR~l~~l~~~g~I~~~ 210 (227)
T 3d0s_A 187 VGASRETVNKALADFAHRGWIRLE 210 (227)
T ss_dssp HTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred hCCcHHHHHHHHHHHHHCCCEEec
Confidence 999999999999888877776654
No 199
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=78.75 E-value=6.7 Score=30.06 Aligned_cols=126 Identities=9% Similarity=-0.027 Sum_probs=78.2
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeCC----C--CeeEEEecCCccEEEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFPR----G--LLHFGFNVGYEFATVF 146 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP~----G--~~H~~~N~g~~~a~~l 146 (205)
....+++|..+-..-- ....+++|++|.+.+...+++|+ .....+.+||++-... + ....... .+++.++
T Consensus 35 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a--~~~~~v~ 111 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGD-PAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRT--RTQCELA 111 (230)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEE--SSCEEEE
T ss_pred eEEEeCCCCEEECCCC-CCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehhhhcCCCCceeEEEE--cCcEEEE
Confidence 4556777775533222 34689999999999998887765 3456789999985422 1 1222333 3445444
Q ss_pred EEEe-------CCC-----Cceeec----------------------------cccc------cC--------CCCCCHH
Q 042644 147 SVLN-------SQN-----PGVVSI----------------------------SDAA------FS--------DFDTIDD 172 (205)
Q Consensus 147 ~~~~-------s~~-----pg~~~~----------------------------~~~~------f~--------~~~~~~e 172 (205)
.+-. ..+ |..... +..+ ++ .-.++.+
T Consensus 112 ~i~~~~~~~l~~~~~~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~lt~~ 191 (230)
T 3iwz_A 112 EISYERLQQLFQTSLSPDAPRILYAIGVQLSKRLLDTTRKASRLAFLDVTDRIVRTLHDLSKEPEAMSHPQGTQLRVSRQ 191 (230)
T ss_dssp EEEHHHHHHHHHTTTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHH
T ss_pred EEeHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhCCCCCCCceecCCCHH
Confidence 3221 234 432210 0000 00 0036899
Q ss_pred HHHhhcCCCHHHHHHhhhcCCCcccEEEee
Q 042644 173 LVRKFIPFLCWTIRVSEMSHFQDNKLKIMK 202 (205)
Q Consensus 173 vLa~af~v~~~~v~~l~~~~~~~~~i~i~~ 202 (205)
.||...|++++++.++.+.-.+.|-|.+-+
T Consensus 192 ~lA~~lg~sr~tvsR~l~~L~~~g~I~~~~ 221 (230)
T 3iwz_A 192 ELARLVGCSREMAGRVLKKLQADGLLHARG 221 (230)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHTTSEEEET
T ss_pred HHHHHhCCcHHHHHHHHHHHHHCCCEEECC
Confidence 999999999999999999888888777644
No 200
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=78.44 E-value=6.2 Score=30.40 Aligned_cols=128 Identities=13% Similarity=-0.024 Sum_probs=75.5
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeCC---CCeeEEEecCCccEEEEEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFPR---GLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP~---G~~H~~~N~g~~~a~~l~~ 148 (205)
+....+++|..+-.--- ....+++|++|.+.+...+++|+ .....+.+||++-... +..+...-.-.+++.++.+
T Consensus 29 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 107 (231)
T 3e97_A 29 VTERNFQPDELVVEQDA-EGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRALTPVRTLML 107 (231)
T ss_dssp EEEEEECTTCBCCCTTC-TTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTTTTTCCCCCCEEEEESSCEEEEEE
T ss_pred cEEEEECCCCEEEeCCC-CCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeHHHhCCCCceEEEEECCcEEEEEE
Confidence 34567788886543322 35679999999999988876665 4457889999874321 1222211112344544432
Q ss_pred Ee-------CCCCceee---------------------------cc-------c--c------ccCCCCCCHHHHHhhcC
Q 042644 149 LN-------SQNPGVVS---------------------------IS-------D--A------AFSDFDTIDDLVRKFIP 179 (205)
Q Consensus 149 ~~-------s~~pg~~~---------------------------~~-------~--~------~f~~~~~~~evLa~af~ 179 (205)
-. ..+|.... ++ . . .+.. .++.+.||...|
T Consensus 108 ~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~~~~~-~~t~~~iA~~lg 186 (231)
T 3e97_A 108 HREHFELILRRHPRVLWNLAEMLARRVTFLNDELIAFGQNTEAALTHVFANLYRQRLAAGVPQPEVL-PLGTQDIMARTS 186 (231)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTCSSTTEE-CCCHHHHHHHHT
T ss_pred eHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHhcCCCCCCceEec-CCCHHHHHHHhC
Confidence 11 01222110 00 0 0 0111 478999999999
Q ss_pred CCHHHHHHhhhcCCCcccEEEee
Q 042644 180 FLCWTIRVSEMSHFQDNKLKIMK 202 (205)
Q Consensus 180 v~~~~v~~l~~~~~~~~~i~i~~ 202 (205)
++++++.++.+.-.+.|-|.+-+
T Consensus 187 ~sr~tvsR~l~~L~~~g~I~~~~ 209 (231)
T 3e97_A 187 SSRETVSRVLKRLEAHNILEVSP 209 (231)
T ss_dssp CCHHHHHHHHHHHHHTTSEEECS
T ss_pred CcHHHHHHHHHHHHHCCcEEecC
Confidence 99999999998887777666543
No 201
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=77.97 E-value=19 Score=27.42 Aligned_cols=123 Identities=10% Similarity=-0.023 Sum_probs=75.8
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEe-
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLN- 150 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~- 150 (205)
+....+++|..+-.--. .+..+++|++|.+.+. .+++|+ .....+.+||++- ....+..... +++.++.+-.
T Consensus 23 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i~~~ 96 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEG-DENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFADIR 96 (222)
T ss_dssp CEEEEECTTCEEECTTC-CCCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEECHH
T ss_pred CcEEEECCCCEEECCCC-CCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEEeHH
Confidence 34566778876533222 3457999999999996 555665 3457889999998 3334444443 4555544311
Q ss_pred ------CCCCceeec----------------------------cc------cccCC---------CCCCHHHHHhhcCCC
Q 042644 151 ------SQNPGVVSI----------------------------SD------AAFSD---------FDTIDDLVRKFIPFL 181 (205)
Q Consensus 151 ------s~~pg~~~~----------------------------~~------~~f~~---------~~~~~evLa~af~v~ 181 (205)
..+|..... +. .-++. -.++.+.||..+|++
T Consensus 97 ~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~lG~s 176 (222)
T 1ft9_A 97 TFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGSS 176 (222)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCSC
T ss_pred HHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 123432211 00 00100 147899999999999
Q ss_pred HHHHHHhhhcCCCcccEEEe
Q 042644 182 CWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 182 ~~~v~~l~~~~~~~~~i~i~ 201 (205)
++++.++.+.-.+.|-|.+-
T Consensus 177 r~tvsR~l~~L~~~g~I~~~ 196 (222)
T 1ft9_A 177 RQTTSTALNSLIKEGYISRQ 196 (222)
T ss_dssp HHHHHHHHHHHHHTTSSEEC
T ss_pred HHHHHHHHHHHHHCCcEEEc
Confidence 99999998887777766543
No 202
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=77.82 E-value=6.3 Score=29.65 Aligned_cols=121 Identities=7% Similarity=-0.064 Sum_probs=70.6
Q ss_pred EEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEe--CCCC--eeEEEecCCccEEEEEEEeC
Q 042644 77 DLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVF--PRGL--LHFGFNVGYEFATVFSVLNS 151 (205)
Q Consensus 77 ~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~v--P~G~--~H~~~N~g~~~a~~l~~~~s 151 (205)
.+++|..+-.--. .+..+++|++|.+.+...+++|+ .....+.+||++-. -.+. .+.... .+++.++. ++.
T Consensus 3 ~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A--~~~~~v~~-i~~ 78 (195)
T 3b02_A 3 RFARKETIYLRGE-EARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEA--MTEAVVQG-LEP 78 (195)
T ss_dssp EECTTCEEECTTS-BCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEE--SSSEEEEE-ECG
T ss_pred EcCCCCEEECCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEE--CCcEEEEE-EcH
Confidence 3455554322111 34579999999999988877665 44578899999854 0111 222333 34454443 222
Q ss_pred CC--Cceeec----------------------------cccc------cCC--------CCCCHHHHHhhcCCCHHHHHH
Q 042644 152 QN--PGVVSI----------------------------SDAA------FSD--------FDTIDDLVRKFIPFLCWTIRV 187 (205)
Q Consensus 152 ~~--pg~~~~----------------------------~~~~------f~~--------~~~~~evLa~af~v~~~~v~~ 187 (205)
.. |..... +..+ ++. ..++.+.||...|++++++.+
T Consensus 79 ~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~tvsR 158 (195)
T 3b02_A 79 RAMDHEALHRVARNLARQMRRVQAYEAHLQTGELRARIARYLLFLADTPLSARDRQGIYVTVSHEEIADATASIRESVSK 158 (195)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHTTTSCHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCeeeccCCHHHHHHHhCCCHHHHHH
Confidence 21 211100 0000 110 037899999999999999999
Q ss_pred hhhcCCCcccEEEe
Q 042644 188 SEMSHFQDNKLKIM 201 (205)
Q Consensus 188 l~~~~~~~~~i~i~ 201 (205)
+.+.-.+.|-|.+-
T Consensus 159 ~l~~L~~~g~I~~~ 172 (195)
T 3b02_A 159 VLADLRREGLIATA 172 (195)
T ss_dssp HHHHHHHHTSEEEE
T ss_pred HHHHHHHCCCEEec
Confidence 98888777766553
No 203
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=76.95 E-value=2.6 Score=30.14 Aligned_cols=52 Identities=13% Similarity=0.134 Sum_probs=34.4
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVC 125 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~ 125 (205)
+....+++|..+-.--. .+..+++|++|.+.+...+++|+ .....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGE-PAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCC-ccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 44566788876533323 35679999999999887665554 335688999987
No 204
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=76.44 E-value=9.1 Score=30.39 Aligned_cols=125 Identities=10% Similarity=0.083 Sum_probs=77.4
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeCC----C--CeeEEEecCCccEEEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFPR----G--LLHFGFNVGYEFATVF 146 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP~----G--~~H~~~N~g~~~a~~l 146 (205)
....+++|..+-.--- ....+++|++|.+.+...+++|+ .....+.+||++-... . ....... .+++.++
T Consensus 70 ~~~~~~~ge~i~~~G~-~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A--~~~~~l~ 146 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGE-KAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRA--KTACEVA 146 (260)
T ss_dssp EEEEECTTCEEECTTC-BCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEE--SSCEEEE
T ss_pred EEEEECCCCEEECCCC-cCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEE--CCCeEEE
Confidence 4566788876533222 35689999999999998877765 3467889999985332 1 2223333 3445444
Q ss_pred EEEe-------CCCCceeec----------------------------ccccc---CC-----------CCCCHHHHHhh
Q 042644 147 SVLN-------SQNPGVVSI----------------------------SDAAF---SD-----------FDTIDDLVRKF 177 (205)
Q Consensus 147 ~~~~-------s~~pg~~~~----------------------------~~~~f---~~-----------~~~~~evLa~a 177 (205)
.+-. ..+|..... +..+. .. -.++.+.||..
T Consensus 147 ~i~~~~~~~l~~~~p~l~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~Ll~l~~~~~~~~~~~~~~l~lt~~~lA~~ 226 (260)
T 3kcc_A 147 EISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQI 226 (260)
T ss_dssp EEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSTTCEEETTEEEEECCHHHHHHH
T ss_pred EEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceeecCCHHHHHHH
Confidence 3321 123432110 00000 00 04678999999
Q ss_pred cCCCHHHHHHhhhcCCCcccEEEe
Q 042644 178 IPFLCWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 178 f~v~~~~v~~l~~~~~~~~~i~i~ 201 (205)
.|++++++.++.+.-.+.|-|.+-
T Consensus 227 lG~sr~tvsR~l~~L~~~GlI~~~ 250 (260)
T 3kcc_A 227 VGCSRETVGRILKMLEDQNLISAH 250 (260)
T ss_dssp HTCCHHHHHHHHHHHHHTTSEEEC
T ss_pred hCCCHHHHHHHHHHHHHCCCEEEc
Confidence 999999999999888888777654
No 205
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=76.37 E-value=5.7 Score=30.88 Aligned_cols=126 Identities=6% Similarity=-0.092 Sum_probs=77.1
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeC---CC---CeeEEEecCCccEEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFP---RG---LLHFGFNVGYEFATV 145 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP---~G---~~H~~~N~g~~~a~~ 145 (205)
+....+.+|..+-.--. ....+++|++|.+.+...+++|+ .....+.+||++-.. .+ ..+..... +++.+
T Consensus 43 ~~~~~~~~ge~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~--~~~~v 119 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGN-PCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH--TEVHT 119 (232)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEES--SCEEE
T ss_pred cEEEEECCCCEEECCCC-cccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEc--cceEE
Confidence 45667888876533222 35689999999999988776654 455788999988432 12 23344443 44544
Q ss_pred EEEEe-------CCCCceeec----------------------------cccccC---CC------CCCHHHHHhhcCCC
Q 042644 146 FSVLN-------SQNPGVVSI----------------------------SDAAFS---DF------DTIDDLVRKFIPFL 181 (205)
Q Consensus 146 l~~~~-------s~~pg~~~~----------------------------~~~~f~---~~------~~~~evLa~af~v~ 181 (205)
+.+-. ..+|..... +..+.. .+ .++.+.||...|++
T Consensus 120 ~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG~s 199 (232)
T 1zyb_A 120 VCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDT 199 (232)
T ss_dssp EEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSC
T ss_pred EEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhCCC
Confidence 43321 123321110 000111 01 37899999999999
Q ss_pred HHHHHHhhhcCCCcccEEEe
Q 042644 182 CWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 182 ~~~v~~l~~~~~~~~~i~i~ 201 (205)
++++.++.+.-.+.|-|.+-
T Consensus 200 r~tvsR~l~~l~~~glI~~~ 219 (232)
T 1zyb_A 200 RLNISKTLNELQDNGLIELH 219 (232)
T ss_dssp HHHHHHHHHHHHHTTSCEEE
T ss_pred hhHHHHHHHHHHHCCCEEec
Confidence 99999998887777766553
No 206
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=76.21 E-value=8.2 Score=30.21 Aligned_cols=127 Identities=12% Similarity=0.099 Sum_probs=78.6
Q ss_pred eEEEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeC---CCCe----eEEEecCCcc
Q 042644 71 LSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFP---RGLL----HFGFNVGYEF 142 (205)
Q Consensus 71 is~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP---~G~~----H~~~N~g~~~ 142 (205)
..+....+++|..+-.--- ....+++|++|.+.+...+++|+ .....+.+||++-.. .+.. ..... .++
T Consensus 41 ~~~~~~~~~~ge~i~~~G~-~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A--~~~ 117 (243)
T 3la7_A 41 FPPVVETFERNKTIFFPGD-PAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVA--FTP 117 (243)
T ss_dssp CCCEEEEECTTCEEECTTS-BCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEE--SSS
T ss_pred chheeEEECCCCEEEcCCC-CCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcceEEEEE--ccc
Confidence 3344667888886533222 34689999999999998887765 345778999987432 1111 22333 345
Q ss_pred EEEEEEEe-------CCCCceeec----------------------------c-------c---------cccCCCCCCH
Q 042644 143 ATVFSVLN-------SQNPGVVSI----------------------------S-------D---------AAFSDFDTID 171 (205)
Q Consensus 143 a~~l~~~~-------s~~pg~~~~----------------------------~-------~---------~~f~~~~~~~ 171 (205)
+.++.+-. ..+|..... + . ..+. -.++.
T Consensus 118 ~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~-~~lt~ 196 (243)
T 3la7_A 118 VELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITID-LKLSH 196 (243)
T ss_dssp EEEEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHEEECSSSEEEC-SCCCH
T ss_pred eEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCeEEe-ccCCH
Confidence 55444311 234432110 0 0 0111 15789
Q ss_pred HHHHhhcCCCHHHHHHhhhcCCCcccEEEe
Q 042644 172 DLVRKFIPFLCWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 172 evLa~af~v~~~~v~~l~~~~~~~~~i~i~ 201 (205)
+.||..+|++++++.++.+.-.+.|-|.+-
T Consensus 197 ~~lA~~lG~sr~tvsR~l~~L~~~GlI~~~ 226 (243)
T 3la7_A 197 QAIAEAIGSTRVTVTRLLGDLREKKMISIH 226 (243)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHCCcHHHHHHHHHHHHHCCCEEEc
Confidence 999999999999999999888777766654
No 207
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=76.07 E-value=23 Score=26.81 Aligned_cols=120 Identities=11% Similarity=0.010 Sum_probs=76.0
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEEEe--
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSVLN-- 150 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~~~-- 150 (205)
....+++|..+-.--. .+..+++|++|.+.+. .+++|+ .....+.+||++-.| ........ +++.++.+-.
T Consensus 28 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~~--~~~~~~A~--~~~~v~~i~~~~ 101 (220)
T 2fmy_A 28 REQRYSKKAILYTPNT-ERNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCTH--TRAFIQAM--EDTTILYTDIRN 101 (220)
T ss_dssp EEEEECTTCEEECTTC-SSCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEESC--SSSEEEES--SSEEEEEEEHHH
T ss_pred heeEeCCCCEEECCCC-CCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCCc--cceEEEEc--CcEEEEEEeHHH
Confidence 4566788876533222 3567999999999994 665665 445788999999872 23344443 4555544321
Q ss_pred -----CCCCceeec-----------------------------------cc---c------ccCCCCCCHHHHHhhcCCC
Q 042644 151 -----SQNPGVVSI-----------------------------------SD---A------AFSDFDTIDDLVRKFIPFL 181 (205)
Q Consensus 151 -----s~~pg~~~~-----------------------------------~~---~------~f~~~~~~~evLa~af~v~ 181 (205)
..+|..... +. . .+.. .++.+.||...|++
T Consensus 102 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~-~~t~~~lA~~lg~s 180 (220)
T 2fmy_A 102 FQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLEL-GLNTEEIALMLGTT 180 (220)
T ss_dssp HHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEEC-SSCHHHHHHHHTSC
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEec-cCCHHHHHHHhCCc
Confidence 123432111 00 0 0111 57899999999999
Q ss_pred HHHHHHhhhcCCCcccEEE
Q 042644 182 CWTIRVSEMSHFQDNKLKI 200 (205)
Q Consensus 182 ~~~v~~l~~~~~~~~~i~i 200 (205)
++++.++.+.-.+.|-|.+
T Consensus 181 r~tvsR~l~~l~~~g~I~~ 199 (220)
T 2fmy_A 181 RQTVSVLLNDFKKMGILER 199 (220)
T ss_dssp HHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHHCCCEEE
Confidence 9999999888777776665
No 208
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=75.77 E-value=6 Score=30.30 Aligned_cols=126 Identities=6% Similarity=-0.008 Sum_probs=47.5
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeCC------CCeeEEEecCCccEEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFPR------GLLHFGFNVGYEFATV 145 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP~------G~~H~~~N~g~~~a~~ 145 (205)
+....+++|..+-..-. ....+++|++|.+.+...+++|+ .....+.+||++-... ...+..... +++.+
T Consensus 22 ~~~~~~~~g~~i~~~G~-~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~--~~~~v 98 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDD-PIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAG--ENSKI 98 (213)
T ss_dssp SEEEEECTTCEEECTTC-BCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEES--SSEEE
T ss_pred cEEEEECCCCEEEcCCC-ccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEc--cceEE
Confidence 34566788876533322 34678999999999988877765 3456789999874221 123334433 44544
Q ss_pred EEEEe-------CCCCceee-c---------------------------cccccCC--------CCCCHHHHHhhcCCCH
Q 042644 146 FSVLN-------SQNPGVVS-I---------------------------SDAAFSD--------FDTIDDLVRKFIPFLC 182 (205)
Q Consensus 146 l~~~~-------s~~pg~~~-~---------------------------~~~~f~~--------~~~~~evLa~af~v~~ 182 (205)
+.+-. ..+|.... + +..+... -.++.+.||..+|+++
T Consensus 99 ~~i~~~~~~~l~~~~p~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~g~~~~~~t~~~lA~~lg~sr 178 (213)
T 1o5l_A 99 LSIPKEVFLDLLMKDRELLLFFLKDVSEHFRVVSEKLFFLTTKTLREKLMNFLVRHMNEKRELTLPVTLEELSRLFGCAR 178 (213)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------------------------------------
T ss_pred EEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHhccCCcccCCCCHHHHHHHhCCCH
Confidence 43221 12333210 0 0111110 1467899999999999
Q ss_pred HHHHHhhhcCCCcccEEEe
Q 042644 183 WTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 183 ~~v~~l~~~~~~~~~i~i~ 201 (205)
+++.++.+.-.+.|-|.+-
T Consensus 179 ~tvsR~l~~L~~~G~I~~~ 197 (213)
T 1o5l_A 179 PALSRVFQELEREGYIEKH 197 (213)
T ss_dssp -------------------
T ss_pred HHHHHHHHHHHHCCeEEEc
Confidence 9999999888877766554
No 209
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=75.05 E-value=2.8 Score=36.00 Aligned_cols=29 Identities=14% Similarity=0.375 Sum_probs=24.8
Q ss_pred EEEEEcCCCEEEeCCCCeeEEEecCCccE
Q 042644 115 FQVMLKAGEVCVFPRGLLHFGFNVGYEFA 143 (205)
Q Consensus 115 ~~~~l~~GDv~~vP~G~~H~~~N~g~~~a 143 (205)
+...=++||++++++|..||..|.|-.-.
T Consensus 279 yr~~QkpGd~Vi~~PgayH~v~n~G~~~n 307 (332)
T 2xxz_A 279 YRFVQRPGDLVWINAGTVHWVQATGWCNN 307 (332)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecceeeE
Confidence 35777999999999999999999986433
No 210
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=74.99 E-value=9 Score=30.00 Aligned_cols=125 Identities=10% Similarity=0.039 Sum_probs=76.8
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEe--CCCCeeEEEecCCccEEEEEEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVF--PRGLLHFGFNVGYEFATVFSVL 149 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~v--P~G~~H~~~N~g~~~a~~l~~~ 149 (205)
+....+++|..+-.--- ....+++|++|.+.+...+++|+ .....+.+||++-. .....+.... .+++.++.+-
T Consensus 32 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A--~~~~~v~~i~ 108 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGE-EITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATA--MEPTRTCWFS 108 (250)
T ss_dssp SEEEEECTTCEEECTTC-CCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEE--SSSEEEEEEC
T ss_pred CeEEEECCCCEEECCCC-CCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEE--cccEEEEEEc
Confidence 34556777775533222 34679999999999998877765 34567899998853 1112223333 3444444321
Q ss_pred e-------CCCCceeec----------------------------ccc----------------ccCCCCCCHHHHHhhc
Q 042644 150 N-------SQNPGVVSI----------------------------SDA----------------AFSDFDTIDDLVRKFI 178 (205)
Q Consensus 150 ~-------s~~pg~~~~----------------------------~~~----------------~f~~~~~~~evLa~af 178 (205)
. ..+|..... +.. .+. ..++.+.||...
T Consensus 109 ~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~-~~~t~~~iA~~l 187 (250)
T 3e6c_C 109 EKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEIT-MPLSQKSIGEIT 187 (250)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEE-CCCCHHHHHHHH
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEec-CCCCHHHHHHHh
Confidence 1 123432110 000 111 157899999999
Q ss_pred CCCHHHHHHhhhcCCCcccEEEe
Q 042644 179 PFLCWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 179 ~v~~~~v~~l~~~~~~~~~i~i~ 201 (205)
|++++++.++.+.-.+.|-|.+-
T Consensus 188 G~sr~tvsR~l~~L~~~g~I~~~ 210 (250)
T 3e6c_C 188 GVHHVTVSRVLASLKRENILDKK 210 (250)
T ss_dssp TCCHHHHHHHHHHHHHTTSEEEC
T ss_pred CCcHHHHHHHHHHHHHCCCeEeC
Confidence 99999999999888777766654
No 211
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=74.53 E-value=8.1 Score=29.13 Aligned_cols=121 Identities=9% Similarity=0.050 Sum_probs=74.1
Q ss_pred EEEcCCcccCCccCCCC--CeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEe----CCCCeeEEEecCCccEEEEEE
Q 042644 76 TDLDVDGMVVPHTHPRA--SEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVF----PRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 76 ~~l~pgg~~~pH~Hp~a--~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~v----P~G~~H~~~N~g~~~a~~l~~ 148 (205)
..+++|..+-..-. .. ..+++|++|.+.+...+++|+ .....+.+||++-. .....+.... -+++.++.+
T Consensus 8 ~~~~~g~~i~~~g~-~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A--~~~~~v~~i 84 (202)
T 2zcw_A 8 VSFKAGDVILYPGV-PGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEA--ATDVRLEPL 84 (202)
T ss_dssp EEECTTCEEECSBS-CCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEE--SSCEEEEEC
T ss_pred EEECCCCEEECCCC-CCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEE--cccEEEEEE
Confidence 45667765432222 23 468999999999988877665 34567899998854 1122333333 345555554
Q ss_pred EeCC-CCceeec----------------------------cccc---------------cCCCCCCHHHHHhhcCCCHHH
Q 042644 149 LNSQ-NPGVVSI----------------------------SDAA---------------FSDFDTIDDLVRKFIPFLCWT 184 (205)
Q Consensus 149 ~~s~-~pg~~~~----------------------------~~~~---------------f~~~~~~~evLa~af~v~~~~ 184 (205)
... .|..... +..+ +. ..++.+.||...|+++++
T Consensus 85 -~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~-~~~t~~~lA~~lg~sr~t 162 (202)
T 2zcw_A 85 -PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVV-LKATHDELAAAVGSVRET 162 (202)
T ss_dssp -CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEE-EECCHHHHHHHHTCCHHH
T ss_pred -hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEc-cCCCHHHHHHHhCCCHHH
Confidence 221 1221100 0000 11 147899999999999999
Q ss_pred HHHhhhcCCCcccEEEe
Q 042644 185 IRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 185 v~~l~~~~~~~~~i~i~ 201 (205)
+.++.+.-.+.|-|.+-
T Consensus 163 vsR~l~~L~~~g~I~~~ 179 (202)
T 2zcw_A 163 VTKVIGELAREGYIRSG 179 (202)
T ss_dssp HHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHCCCEEeC
Confidence 99999888877776654
No 212
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=74.38 E-value=5.7 Score=30.64 Aligned_cols=125 Identities=7% Similarity=0.071 Sum_probs=73.6
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEEeC-----CCCeeEEEecCCccEEEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCVFP-----RGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~vP-----~G~~H~~~N~g~~~a~~l 146 (205)
+....+++|..+-.--- ....+++|++|.+.+...+++|+ .....+.+||++-.. ....+.... .++..++
T Consensus 33 ~~~~~~~~g~~i~~~g~-~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A--~~~~~v~ 109 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGD-IPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIA--VENSKVL 109 (232)
T ss_dssp CEEEEECTTCEEECTTC-CCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEE--SSCEEEE
T ss_pred CeEEEECCCCEEEeCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEE--ecceEEE
Confidence 44567788875533222 35678999999999987765554 446788999987432 112333443 3445444
Q ss_pred EEEe-------CCCCceeec----------------------------ccc---------------ccCCCCCCHHHHHh
Q 042644 147 SVLN-------SQNPGVVSI----------------------------SDA---------------AFSDFDTIDDLVRK 176 (205)
Q Consensus 147 ~~~~-------s~~pg~~~~----------------------------~~~---------------~f~~~~~~~evLa~ 176 (205)
.+-. ..+|..... +.. .+. ..++.+.||.
T Consensus 110 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~-~~~t~~~lA~ 188 (232)
T 2gau_A 110 AIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLS-IYLSREELAT 188 (232)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBS-CCCCHHHHHH
T ss_pred EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEE-cccCHHHHHH
Confidence 3221 122321100 000 111 2578999999
Q ss_pred hcCCCHHHHHHhhhcCCCcccEEEe
Q 042644 177 FIPFLCWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 177 af~v~~~~v~~l~~~~~~~~~i~i~ 201 (205)
..|++++++.++.+.-.+.|-|.+-
T Consensus 189 ~lg~sr~tvsR~l~~l~~~g~I~~~ 213 (232)
T 2gau_A 189 LSNMTVSNAIRTLSTFVSERMLALD 213 (232)
T ss_dssp HTTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred HhCCCHHHHHHHHHHHHHCCCEeeC
Confidence 9999999999999888877776654
No 213
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=73.57 E-value=2.8 Score=36.68 Aligned_cols=23 Identities=22% Similarity=0.128 Sum_probs=20.4
Q ss_pred EEEEEEcCCCEEEeCCCCeeEEE
Q 042644 114 VFQVMLKAGEVCVFPRGLLHFGF 136 (205)
Q Consensus 114 ~~~~~l~~GDv~~vP~G~~H~~~ 136 (205)
+....|++||.+++|+|.+|..-
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcC
Confidence 34678999999999999999975
No 214
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=72.76 E-value=10 Score=29.50 Aligned_cols=124 Identities=8% Similarity=0.004 Sum_probs=74.3
Q ss_pred EEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEE-EEEEcCCCEEEeCC---CC----eeEEEecCCccEEEE
Q 042644 75 RTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVF-QVMLKAGEVCVFPR---GL----LHFGFNVGYEFATVF 146 (205)
Q Consensus 75 ~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~-~~~l~~GDv~~vP~---G~----~H~~~N~g~~~a~~l 146 (205)
...+++|..+-.- -.....+++|++|.+.+...+++|+.. ...+ +||++-... +. .+...... ++..++
T Consensus 20 ~~~~~~ge~i~~~-G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~ 96 (238)
T 2bgc_A 20 PKQFHKKELIFNQ-WDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAY 96 (238)
T ss_dssp CEEEETTCEEECT-TCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEE
T ss_pred EEEECCCCEEEeC-CCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEE
Confidence 3456677755221 223467889999999999887777633 3455 899986543 22 34444433 455544
Q ss_pred EEEe-------CCCCceeec----------------------------ccc----------------ccCCCCCCHHHHH
Q 042644 147 SVLN-------SQNPGVVSI----------------------------SDA----------------AFSDFDTIDDLVR 175 (205)
Q Consensus 147 ~~~~-------s~~pg~~~~----------------------------~~~----------------~f~~~~~~~evLa 175 (205)
.+-. ..+|..... +.. .+..|.++.+.||
T Consensus 97 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~~~~~t~~~lA 176 (238)
T 2bgc_A 97 VIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICSQLLILTYVYGKETPDGIKITLDNLTMQELG 176 (238)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHEEEETTEEEECCSCCCHHHHH
T ss_pred EEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhCCCCCCceEEEeccCCHHHHH
Confidence 3321 123321100 000 1111147899999
Q ss_pred hhcCCCH-HHHHHhhhcCCCcccEEEe
Q 042644 176 KFIPFLC-WTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 176 ~af~v~~-~~v~~l~~~~~~~~~i~i~ 201 (205)
...|+++ +++.++.+.-.+.|-|.+-
T Consensus 177 ~~lG~sr~etvsR~l~~l~~~glI~~~ 203 (238)
T 2bgc_A 177 YSSGIAHSSAVSRIISKLKQEKVIVYK 203 (238)
T ss_dssp HHTTCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHhCCChHHHHHHHHHHHHHCCCEEec
Confidence 9999999 7999998888777766654
No 215
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=71.93 E-value=9.5 Score=28.73 Aligned_cols=49 Identities=14% Similarity=0.206 Sum_probs=34.9
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVC 125 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~ 125 (205)
+....+.||..+-.--- .+..+++|++|++.+.. ++|+ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~G~-~~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGT-FGDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTS-CCSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCC-cCcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 45667788876533222 35689999999999865 4566 46789999987
No 216
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=71.10 E-value=11 Score=31.00 Aligned_cols=51 Identities=10% Similarity=0.116 Sum_probs=37.1
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVC 125 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~ 125 (205)
....+.+|..+-.-=- ....+++|++|.+.+...+++++.....+.+||++
T Consensus 37 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLRQGE-PAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEECTTS-BCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred eEEEECCCCEEEeCCC-cCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 4556777775422212 24579999999999998887776667789999987
No 217
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=70.19 E-value=18 Score=28.79 Aligned_cols=52 Identities=10% Similarity=0.094 Sum_probs=37.3
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC--eEEEEEEcCCCEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR--QVFQVMLKAGEVC 125 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~--~~~~~~l~~GDv~ 125 (205)
+....+.+|..+-..-- .+..+++|++|++.+....+++ ......+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGE-PGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCc-cCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 45667788876543323 4568999999999998765544 2456789999988
No 218
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=67.12 E-value=11 Score=28.47 Aligned_cols=48 Identities=15% Similarity=0.228 Sum_probs=33.1
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVC 125 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~ 125 (205)
+....+.||..+-..-. .+..+++|++|.+.+. .++++ ...+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~-~~~~ly~I~~G~v~v~--~~~g~--~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGT-IGKKMYFIQHGVVSVL--TKGNK--EMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECEEEEE--CTTSC--CEEEETTCEE
T ss_pred CCceEECCCCEEEECCC-cCCeEEEEeccEEEEE--ECCCe--EEEEcCCCEe
Confidence 34567788876533322 3468999999999875 34555 3478999987
No 219
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=66.40 E-value=12 Score=28.67 Aligned_cols=66 Identities=12% Similarity=0.188 Sum_probs=47.4
Q ss_pred ccCCccCCCCCeEEEEEecEEEEEEEeCCC------eEEEEEEcCCCEEEeCCCCeeEEEecCCccEEEEEE
Q 042644 83 MVVPHTHPRASEMLFVFKGVVIAGFVDTNR------QVFQVMLKAGEVCVFPRGLLHFGFNVGYEFATVFSV 148 (205)
Q Consensus 83 ~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~------~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l~~ 148 (205)
+..+=.||..++.+.-+.|...+-++.+++ +...+.+..|+.+.+-+|.+|.-.-.-+++..++++
T Consensus 68 v~~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vv 139 (168)
T 1xsq_A 68 IHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTI 139 (168)
T ss_dssp EEEEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEE
T ss_pred eeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEE
Confidence 445667888999999999986544444432 355788999999999999999965443455655533
No 220
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=62.47 E-value=6.4 Score=34.93 Aligned_cols=22 Identities=23% Similarity=0.099 Sum_probs=19.8
Q ss_pred EEEEEcCCCEEEeCCCCeeEEE
Q 042644 115 FQVMLKAGEVCVFPRGLLHFGF 136 (205)
Q Consensus 115 ~~~~l~~GDv~~vP~G~~H~~~ 136 (205)
....|++||.+++|+|.+|...
T Consensus 266 N~v~L~pGea~flpAg~~HAYl 287 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYI 287 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEE
T ss_pred ceEecCCCCEEecCCCCccccC
Confidence 3578999999999999999985
No 221
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=62.39 E-value=17 Score=28.06 Aligned_cols=77 Identities=16% Similarity=0.099 Sum_probs=51.7
Q ss_pred eEEEEEEEcCC--cccCCccCCCCCeEEEEEecEEEEEEEeCCC------eEEEEEEcCCCEEEeCCCCeeEEEecCCcc
Q 042644 71 LSVARTDLDVD--GMVVPHTHPRASEMLFVFKGVVIAGFVDTNR------QVFQVMLKAGEVCVFPRGLLHFGFNVGYEF 142 (205)
Q Consensus 71 is~~~~~l~pg--g~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~------~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~ 142 (205)
+++.+..-... .+..+=.||..++.+.-+.|.-.+-++.+++ +...+....|+.+.+-+|.+|.-.-.-+++
T Consensus 56 isifr~~~r~~p~~v~~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~ 135 (175)
T 2bdr_A 56 ISIFRADAQDMPLTVRMLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKR 135 (175)
T ss_dssp EEEEEEECCCSSEEECEEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSE
T ss_pred EEEEEccccCCCceeeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCC
Confidence 55554432211 2445667888999999999986554554543 356799999999999999999764333345
Q ss_pred EEEEE
Q 042644 143 ATVFS 147 (205)
Q Consensus 143 a~~l~ 147 (205)
..+++
T Consensus 136 ~dF~v 140 (175)
T 2bdr_A 136 DDFLV 140 (175)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 54543
No 222
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=61.94 E-value=7.2 Score=35.26 Aligned_cols=27 Identities=15% Similarity=0.444 Sum_probs=23.9
Q ss_pred EEEEEcCCCEEEeCCCCeeEEEecCCc
Q 042644 115 FQVMLKAGEVCVFPRGLLHFGFNVGYE 141 (205)
Q Consensus 115 ~~~~l~~GDv~~vP~G~~H~~~N~g~~ 141 (205)
+..+=++||++++++|..||.+|.|-.
T Consensus 313 yr~iQkPGdfVit~PgtyH~Vqs~Gf~ 339 (510)
T 4ask_A 313 YRFVQRPGDLVWINAGTVHWVQATGWC 339 (510)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSE
T ss_pred EEEEECCCCEEEECCCceEEEEecCee
Confidence 357779999999999999999999863
No 223
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=61.53 E-value=67 Score=26.80 Aligned_cols=65 Identities=11% Similarity=0.035 Sum_probs=41.2
Q ss_pred EEEcCCcccCCccCCCCCeEEE-EEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecC--CccEEE
Q 042644 76 TDLDVDGMVVPHTHPRASEMLF-VFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVG--YEFATV 145 (205)
Q Consensus 76 ~~l~pgg~~~pH~Hp~a~Ei~y-Vl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g--~~~a~~ 145 (205)
+.|+.+....-.+--...|+.+ .+.|.+.+.+ +++ ++.|..-|.+++|+|.-....... ..++++
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~v---dg~--~f~lg~~dalYVp~G~~~v~~as~d~~~~a~f 129 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEI---DGA--KETMKKQDGYYIGKETKHVRFSSENPDNPAKF 129 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEE---TTE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEE---CCE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEE
Confidence 4455555443333335567765 4588888876 565 458999999999999764444332 344544
No 224
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=61.33 E-value=10 Score=26.47 Aligned_cols=47 Identities=11% Similarity=0.165 Sum_probs=31.4
Q ss_pred EEEEEc-CCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEE
Q 042644 74 ARTDLD-VDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVC 125 (205)
Q Consensus 74 ~~~~l~-pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~ 125 (205)
....+. +|..+-. -...+..+++|++|.+.+.. .+++. ..+.+||++
T Consensus 40 ~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~f 87 (134)
T 2d93_A 40 IFEVVEQAGAIILE-DGQELDSWYVILNGTVEISH--PDGKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEECSSSCEEEC-TTCEECEEEECCBSCEEEEC--SSSCE--EEECTTCEE
T ss_pred eEEEecCCCCEEEe-CCCCCCeEEEEEeCEEEEEc--CCCcE--EEecCCCcc
Confidence 455677 6665422 22234578899999999763 45663 678999977
No 225
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=60.96 E-value=28 Score=24.60 Aligned_cols=49 Identities=12% Similarity=0.133 Sum_probs=33.0
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEe
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVF 127 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~v 127 (205)
....+.+|..+-.- ...+..+++|++|.+.+.. ++. ....+.+||++-.
T Consensus 51 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~---~~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHA-GESVDSLCFVVSGSLEVIQ---DDE-VVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEE---TTE-EEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeC-CCCccEEEEEEeeEEEEEE---CCE-EEEEecCCCEeCc
Confidence 34567777754322 1235689999999999865 232 4678899998854
No 226
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=60.54 E-value=13 Score=33.90 Aligned_cols=31 Identities=13% Similarity=0.388 Sum_probs=25.7
Q ss_pred EEEEEcCCCEEEeCCCCeeEEEecCCccEEE
Q 042644 115 FQVMLKAGEVCVFPRGLLHFGFNVGYEFATV 145 (205)
Q Consensus 115 ~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~ 145 (205)
+..+=++||.+++++|..||.+|.|-.-.+.
T Consensus 338 yr~vQkpGd~Vi~~PgayH~v~n~G~~~n~a 368 (531)
T 3avr_A 338 YRFIQRPGDLVWINAGTVHWVQAIGWCNNIA 368 (531)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecceeeeeE
Confidence 4577799999999999999999999644333
No 227
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=59.22 E-value=41 Score=29.04 Aligned_cols=45 Identities=13% Similarity=-0.002 Sum_probs=37.8
Q ss_pred EEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecCCccE
Q 042644 96 LFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVGYEFA 143 (205)
Q Consensus 96 ~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g~~~a 143 (205)
..|++|++++.+..+++. .+..|+++|..++-+-+.|.+. |+..+
T Consensus 358 Y~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H~w~--G~GtV 402 (443)
T 3g7d_A 358 YVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRHRWH--GTGTV 402 (443)
T ss_dssp EEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCEEEE--SSEEE
T ss_pred EEEecCceEEEecCCCCc-cceEECCCCceeeccccccccc--CCceE
Confidence 347899999999877666 7899999999999999999996 55433
No 228
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=58.69 E-value=32 Score=24.41 Aligned_cols=48 Identities=8% Similarity=0.127 Sum_probs=33.6
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVC 125 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~ 125 (205)
+....+.+|..+-.-=. ....+++|++|.+.+.. +++ ....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~---~~~-~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGD-EGDNFYVIDQGEMDVYV---NNE-WATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEESCEEEEE---TTE-EEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCC-CCCeEEEEEecEEEEEE---CCE-EEEEecCCCEe
Confidence 44567888876533222 35789999999999875 444 34678999986
No 229
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=58.65 E-value=20 Score=30.85 Aligned_cols=54 Identities=13% Similarity=0.035 Sum_probs=38.6
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe---EEEEEEcCCCEEEe
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ---VFQVMLKAGEVCVF 127 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~---~~~~~l~~GDv~~v 127 (205)
+....+.+|..+-.- ...+..+++|++|.+.+...+++|+ .....+.+||++-.
T Consensus 65 ~~~~~~~~g~~i~~~-Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFRQ-GDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEeC-CCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 345578888755322 2235679999999999988776663 56789999998854
No 230
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=57.16 E-value=38 Score=23.40 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=32.2
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVC 125 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~ 125 (205)
....+.+|..+-.-=- .+..+++|++|.+.+.. +++ ....+.+||++
T Consensus 47 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~---~g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIKEGD-VGSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEECTTS-CCCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred EEEecCCCCEEEeCCC-cCCEEEEEEeCEEEEEE---CCE-EEEEeCCCCEe
Confidence 4566777775432222 45689999999999843 454 45788999987
No 231
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=57.12 E-value=35 Score=29.33 Aligned_cols=52 Identities=4% Similarity=-0.084 Sum_probs=35.9
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVCV 126 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~~ 126 (205)
+....+.+|..+--.=. ....+++|++|.+.+.. ..+|+ .....+.+||+|-
T Consensus 168 ~~~~~~~~Ge~I~~qGd-~~d~~YiI~sG~v~v~~-~~~G~~~~v~~l~~G~~fG 220 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGD-DGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSFG 220 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEECEEEEEE-ECSSCEEEEEEEESCCEEC
T ss_pred cEEEEeCCCCEEEeCCC-CCceEEEEEeeEEEEEE-ecCCCEEEEEEecCCCEEe
Confidence 44566778775533333 35688999999999887 44443 4567899999774
No 232
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=55.68 E-value=24 Score=28.19 Aligned_cols=51 Identities=22% Similarity=0.289 Sum_probs=35.2
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEe-CCC-eEEEEEEcCCCEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVD-TNR-QVFQVMLKAGEVC 125 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~-~~~-~~~~~~l~~GDv~ 125 (205)
....+.+|..+-.--- .+..+++|++|++.+...+ ++| +.....+.+||++
T Consensus 181 ~~~~~~~g~~I~~~G~-~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 181 EETHYENGEYIIRQGA-RGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp EEEEECTTCEEECTTC-EECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred cEEEECCCCEEEeCCC-CCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 4556777775432222 3467889999999998765 334 3456789999988
No 233
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=55.07 E-value=36 Score=29.36 Aligned_cols=77 Identities=17% Similarity=-0.007 Sum_probs=54.9
Q ss_pred EEEEcC---------CCEEEeCCCCeeEEEecCCccEEEEEEEeCCCCcee-----ec------------c---------
Q 042644 116 QVMLKA---------GEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVV-----SI------------S--------- 160 (205)
Q Consensus 116 ~~~l~~---------GDv~~vP~G~~H~~~N~g~~~a~~l~~~~s~~pg~~-----~~------------~--------- 160 (205)
+.++++ ||.++.|.-.+|...-.++.|+++++-....+-... .+ .
T Consensus 156 wr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~L 235 (443)
T 3g7d_A 156 WRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSVL 235 (443)
T ss_dssp EEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHHH
T ss_pred heeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHHH
Confidence 678888 999999999999998899999998875543331100 00 0
Q ss_pred ccccCCCCCCHHHHHhhcCCCHHHHHHhhhcC
Q 042644 161 DAAFSDFDTIDDLVRKFIPFLCWTIRVSEMSH 192 (205)
Q Consensus 161 ~~~f~~~~~~~evLa~af~v~~~~v~~l~~~~ 192 (205)
...+...+++.+-||++.|++++.+..+....
T Consensus 236 R~ar~ReglTQ~~LAe~TGIPq~hISeMenGK 267 (443)
T 3g7d_A 236 DLFLARRAHTRTSAAEAAGVPPADLEAALRSP 267 (443)
T ss_dssp HHHHHHTTCCHHHHHHHHTCCHHHHHHHHHCT
T ss_pred HHHHHhcCCCHHHHHHHhCCCHHHHHHHhcCC
Confidence 11222127899999999999998887766543
No 234
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=50.93 E-value=5 Score=30.72 Aligned_cols=52 Identities=13% Similarity=0.134 Sum_probs=0.0
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCe-EEEEEEcCCCEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQ-VFQVMLKAGEVC 125 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~-~~~~~l~~GDv~ 125 (205)
+....+++|..+-..-. ....+++|++|.+.+...+++|+ .....+.+||++
T Consensus 32 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~ 84 (227)
T 3dkw_A 32 SDLVNLDKGAYVFRQGE-PAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 84 (227)
T ss_dssp CEEEECCTTEEEECTTS-BCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEE
T ss_pred CEEEEECCCCEEEcCCC-ccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEe
No 235
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=49.97 E-value=16 Score=25.31 Aligned_cols=45 Identities=18% Similarity=0.269 Sum_probs=30.6
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVC 125 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~ 125 (205)
....+++|..+-.--. ....+++|++|.+.+...+ ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~------~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGE-PGDRMFFVVEGSVSVATPN------PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTS-CCCEEEEEEESCEEECSSS------CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCC-CcceEEEEEeeEEEEEeCC------cceECCCCEe
Confidence 4567788876533322 3567999999999986422 2478888876
No 236
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=48.89 E-value=20 Score=19.95 Aligned_cols=28 Identities=14% Similarity=-0.077 Sum_probs=23.6
Q ss_pred CCCHHHHHhhcCCCHHHHHHhhhcCCCc
Q 042644 168 DTIDDLVRKFIPFLCWTIRVSEMSHFQD 195 (205)
Q Consensus 168 ~~~~evLa~af~v~~~~v~~l~~~~~~~ 195 (205)
+++...+|+.++++..++.++.....+.
T Consensus 21 g~s~~~IA~~lgis~~Tv~~~~~~~~~~ 48 (51)
T 1tc3_C 21 NVSLHEMSRKISRSRHCIRVYLKDPVSY 48 (51)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHHCSTTT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHhhHHhc
Confidence 6788999999999999999987765544
No 237
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=45.04 E-value=9.7 Score=25.36 Aligned_cols=33 Identities=6% Similarity=-0.250 Sum_probs=27.8
Q ss_pred CCCHHHHHhhcCCCHHHHHHhhhcCCCcccEEE
Q 042644 168 DTIDDLVRKFIPFLCWTIRVSEMSHFQDNKLKI 200 (205)
Q Consensus 168 ~~~~evLa~af~v~~~~v~~l~~~~~~~~~i~i 200 (205)
.+..+-|++.|++++.++++....-++.|.|+=
T Consensus 16 ~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~l~R 48 (78)
T 1xn7_A 16 RMEAAQISQTLNTPQPMINAMLQQLESMGKAVR 48 (78)
T ss_dssp SBCHHHHHHHTTCCHHHHHHHHHHHHHHTSEEE
T ss_pred CCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 567889999999999999998888777776643
No 238
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=44.66 E-value=53 Score=27.31 Aligned_cols=65 Identities=9% Similarity=-0.034 Sum_probs=43.1
Q ss_pred ceEEEEEEEcCCccc-CCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeE-------EEecCCc
Q 042644 70 GLSVARTDLDVDGMV-VPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHF-------GFNVGYE 141 (205)
Q Consensus 70 gis~~~~~l~pgg~~-~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~-------~~N~g~~ 141 (205)
|.....+.+.||... ..-.| +..|=.|+++|.. ..|+.++-|+|+.|. -.- .+.
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iH-dy~EEvY~LeG~~----------------d~G~Y~~RPpg~~HGps~~~~ppf~-Se~ 277 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQ-PYNEEGYCLTGYC----------------DVGDYRIVKDHYWYCPSFSTLPRHI-TDD 277 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEE-CSCEEEEEEEEEE----------------EETTEEEETTEEEEECTTEEECCEE-ESS
T ss_pred CCeEEEEEECCCCCCCCceee-ccceeEEEEeeec----------------cCceeeEcCCCCccCccccCCCCcC-cCC
Confidence 556666777777533 22335 5678899999976 248999999999998 332 245
Q ss_pred cEEEEEEEeCC
Q 042644 142 FATVFSVLNSQ 152 (205)
Q Consensus 142 ~a~~l~~~~s~ 152 (205)
-+.++.-.+.+
T Consensus 278 G~l~fvR~Dgd 288 (303)
T 2qdr_A 278 GGLFFVRVDRD 288 (303)
T ss_dssp CEEEEEEESSC
T ss_pred ceEEEEEeCcc
Confidence 56565544433
No 239
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=43.90 E-value=47 Score=27.65 Aligned_cols=50 Identities=12% Similarity=-0.021 Sum_probs=34.0
Q ss_pred CCCeEEE-EEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCCCeeEEEecC--CccEEE
Q 042644 91 RASEMLF-VFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRGLLHFGFNVG--YEFATV 145 (205)
Q Consensus 91 ~a~Ei~y-Vl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G~~H~~~N~g--~~~a~~ 145 (205)
...|+.+ .+.|.+.+.+ +++ ++.|..-|.+++|+|.-....... ..++++
T Consensus 77 ~~rE~~iV~l~G~~~V~v---dG~--~f~lg~~dalYVp~g~~~v~~as~da~~~a~f 129 (282)
T 1xru_A 77 ERRELGVINIGGAGTITV---DGQ--CYEIGHRDALYVGKGAKEVVFASIDTGTPAKF 129 (282)
T ss_dssp TTEEEEEEECSSCEEEEE---TTE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCE
T ss_pred CCcEEEEEEccCeEEEEE---CCE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEE
Confidence 4457765 5588888876 565 458999999999999864444332 235544
No 240
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=43.55 E-value=39 Score=25.72 Aligned_cols=48 Identities=8% Similarity=0.042 Sum_probs=32.1
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVC 125 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~ 125 (205)
....+.+|..+-.--- .+..+++|.+|++.+.... .. ....+.+||++
T Consensus 149 ~~~~~~~g~~i~~~g~-~~~~~y~I~~G~v~v~~~~--~~-~~~~l~~g~~f 196 (246)
T 3of1_A 149 DTKIYQPGETIIREGD-QGENFYLIEYGAVDVSKKG--QG-VINKLKDHDYF 196 (246)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEECEEEEEETT--TE-EEEEEETTCEE
T ss_pred heEEeCCCCEEEeCCC-cCCEEEEEEecEEEEEEcC--Cc-eEEEcCCCCcc
Confidence 4456677775533222 3568889999999987532 22 45788999977
No 241
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=42.35 E-value=52 Score=24.74 Aligned_cols=50 Identities=10% Similarity=0.127 Sum_probs=34.8
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEe
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVF 127 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~v 127 (205)
+....+.||..+-.--- ....+++|++|++.+.. ++. ....+.+||++-.
T Consensus 98 ~~~~~~~~ge~I~~~G~-~~~~ly~I~~G~v~v~~---~~~-~~~~l~~G~~fGe 147 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGD-ALQAIYFVCSGSMEVLK---DNT-VLAILGKGDLIGS 147 (212)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECCEEEES---SSC-EEEEECTTCEEEC
T ss_pred hheEEeCCCCEEEECCC-cccEEEEEEecEEEEEE---CCe-EEEEecCCCCcCc
Confidence 44567888886533222 35689999999998764 333 3678999998854
No 242
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=41.24 E-value=68 Score=25.22 Aligned_cols=49 Identities=8% Similarity=0.102 Sum_probs=34.6
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCV 126 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~ 126 (205)
+....+++|..+-..-. ....+++|++|++.+.. +++ ....+.+||++-
T Consensus 62 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~---~g~-~~~~l~~G~~fG 110 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGD-EGDNFYVIDQGEMDVYV---NNE-WATSVGEGGSFG 110 (291)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECCEEEEE---TTE-EEEEECTTCEEC
T ss_pred ccEEEECCCCEEEeCCC-CCceEEEEeeeEEEEEE---CCe-EEEEcCCCCccc
Confidence 34567788876533322 35689999999999876 344 467899999884
No 243
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=40.91 E-value=10 Score=25.91 Aligned_cols=33 Identities=6% Similarity=-0.272 Sum_probs=28.0
Q ss_pred CCCHHHHHhhcCCCHHHHHHhhhcCCCcccEEE
Q 042644 168 DTIDDLVRKFIPFLCWTIRVSEMSHFQDNKLKI 200 (205)
Q Consensus 168 ~~~~evLa~af~v~~~~v~~l~~~~~~~~~i~i 200 (205)
.+..+-|++.|++++.++++....-++.|.|+=
T Consensus 16 ~vsv~eLA~~l~VS~~TIRrDL~~Le~~G~l~R 48 (87)
T 2k02_A 16 RMEAKQLSARLQTPQPLIDAMLERMEAMGKVVR 48 (87)
T ss_dssp SEEHHHHHHHTTCCHHHHHHHHHHHHTTCCSEE
T ss_pred CCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 467889999999999999999888888886653
No 244
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=37.52 E-value=45 Score=25.34 Aligned_cols=48 Identities=13% Similarity=0.050 Sum_probs=32.6
Q ss_pred EEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEE
Q 042644 74 ARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCV 126 (205)
Q Consensus 74 ~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~ 126 (205)
....+++|..+-.-=. .+..+++|++|.+.+.. +++. ...+.+||++-
T Consensus 31 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~v~~---~~~~-~~~~~~g~~fG 78 (246)
T 3of1_A 31 EEKSVPKGATIIKQGD-QGDYFYVVEKGTVDFYV---NDNK-VNSSGPGSSFG 78 (246)
T ss_dssp EEEEECTTCEEECTTC-CCCEEEEEEECCEEEES---TTSC-CEEECTTCEEC
T ss_pred ceEEECCCCEEEecCC-CCCEEEEEEeeEEEEEE---CCEE-EEecCCCCeee
Confidence 3556777775433223 35689999999999764 3332 47899999884
No 245
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=36.20 E-value=84 Score=21.75 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=26.8
Q ss_pred CCcccCCccCCCCC-eEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCC
Q 042644 80 VDGMVVPHTHPRAS-EMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRG 130 (205)
Q Consensus 80 pgg~~~pH~Hp~a~-Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G 130 (205)
.||+..|-.-..-. +=-+|-=|.+.. +.+++.....++.||.++++.|
T Consensus 22 ~gGI~LP~sakeKp~~G~VvAVG~G~~---~~~G~~~p~~VkvGD~Vlf~k~ 70 (97)
T 1pcq_O 22 AGGIVLTGSAAAKSTRGEVLAVGNGRI---LENGEVKPLDVKVGDIVIFNDG 70 (97)
T ss_dssp TTSSCCCCCCSCCCCEEEEEEECSEEC---TTSSSCEECSCCTTCEEEECCC
T ss_pred cceEEeCcccccCCcccEEEEEcCcee---cCCCCEEecccCCCCEEEECCc
Confidence 36666554332222 222233344432 3345555667999999999994
No 246
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=35.93 E-value=59 Score=24.04 Aligned_cols=53 Identities=17% Similarity=0.090 Sum_probs=37.6
Q ss_pred cCCccCCCCCeEEEEEecEEEEEEEeCC-C--------------------eEEEEEEcCCCEEEeCCCCeeEEE
Q 042644 84 VVPHTHPRASEMLFVFKGVVIAGFVDTN-R--------------------QVFQVMLKAGEVCVFPRGLLHFGF 136 (205)
Q Consensus 84 ~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~-~--------------------~~~~~~l~~GDv~~vP~G~~H~~~ 136 (205)
..+=.|-+-..+-|+++|+=++++.... . ......+++|+..++-++.+|...
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~ 133 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPC 133 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCcccccc
Confidence 3455566677899999998777765311 0 012467899999999999999863
No 247
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=34.33 E-value=63 Score=27.69 Aligned_cols=52 Identities=12% Similarity=0.071 Sum_probs=32.8
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCC------Ce-EEEEEEcCCCEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTN------RQ-VFQVMLKAGEVC 125 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~------~~-~~~~~l~~GDv~ 125 (205)
+....+.+|..+-.--- .+..+++|++|++.+.....+ ++ .....+.+||+|
T Consensus 290 l~~~~~~~Ge~I~~eGd-~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQGD-LADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCC-cCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 34556777775432222 456888999999998765543 32 345788999987
No 248
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=34.16 E-value=6.6 Score=27.42 Aligned_cols=48 Identities=23% Similarity=0.449 Sum_probs=28.2
Q ss_pred EEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeE-E--EEEEcCCCEE
Q 042644 76 TDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQV-F--QVMLKAGEVC 125 (205)
Q Consensus 76 ~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~-~--~~~l~~GDv~ 125 (205)
..+++|..+-.- ......+++|++|++.+. ..++++. . ...+.+||++
T Consensus 32 ~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 32 CLFTEKSYLVRE-GDPVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCBCTTEEEECT-TSBCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred EEeCCCCEEEeC-CCCCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 345555543221 223467899999999954 4444541 1 2278888865
No 249
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=32.53 E-value=1e+02 Score=24.35 Aligned_cols=49 Identities=12% Similarity=0.072 Sum_probs=34.1
Q ss_pred EEEEEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEE
Q 042644 73 VARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCV 126 (205)
Q Consensus 73 ~~~~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~ 126 (205)
+....+.+|..+--.-. ....+++|++|.+.+.. +++ ....+.+||++-
T Consensus 62 ~~~~~~~~g~~i~~~G~-~~~~~yiI~~G~v~v~~---~g~-~~~~~~~G~~fG 110 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGD-VGSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVFG 110 (299)
T ss_dssp CEEEEECTTCEEECTTC-BCCCEEEEEESCEEEEE---TTE-EEEEECTTCEES
T ss_pred cCeEEECCCCEEEcCCC-cCceEEEEEEEEEEEEE---CCE-EEEEeCCCCeee
Confidence 34567788876544333 35679999999999843 444 457899999874
No 250
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=29.93 E-value=48 Score=27.95 Aligned_cols=48 Identities=8% Similarity=0.041 Sum_probs=31.5
Q ss_pred EEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCC--eEEEEEEcCCCEE
Q 042644 77 DLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNR--QVFQVMLKAGEVC 125 (205)
Q Consensus 77 ~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~--~~~~~~l~~GDv~ 125 (205)
.+.+|..+-.--. .+..+++|++|++.+....+++ ......+.+||+|
T Consensus 275 ~~~~ge~I~~eGd-~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 275 QFEDGEKIVVQGE-PGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CBCSSCBSSCTTS-BCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred cCCCCCEEEeCCC-cCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 3555554322222 3567889999999998765443 2346789999987
No 251
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=29.83 E-value=1.2e+02 Score=25.86 Aligned_cols=46 Identities=11% Similarity=0.141 Sum_probs=32.0
Q ss_pred EEEcCCcccCCccCCCCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEE
Q 042644 76 TDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVC 125 (205)
Q Consensus 76 ~~l~pgg~~~pH~Hp~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~ 125 (205)
..+.+|..+-.--. .+..+++|++|++.+... ++.....+.+||+|
T Consensus 364 ~~~~~g~~i~~~G~-~~~~~yiI~~G~v~v~~~---~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGE-EGTSWYIILKGSVNVVIY---GKGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTS-CCCEEEEEEESEEEEEET---TTEEEEEEETTCEE
T ss_pred eEecCCCEEEeCCC-cCCeEEEEEEeEEEEEEc---CCeeEEEecCCCEE
Confidence 46778776533323 456899999999998752 22246788999977
No 252
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=27.30 E-value=24 Score=22.32 Aligned_cols=32 Identities=6% Similarity=-0.161 Sum_probs=27.1
Q ss_pred CCCHHHHHhhcCCCHHHHHHhhhcCCCcccEE
Q 042644 168 DTIDDLVRKFIPFLCWTIRVSEMSHFQDNKLK 199 (205)
Q Consensus 168 ~~~~evLa~af~v~~~~v~~l~~~~~~~~~i~ 199 (205)
.++...||+.++++..++.++...-.+.+.|.
T Consensus 25 ~~s~~eLA~~lglsr~tv~~~l~~L~~~G~I~ 56 (67)
T 2heo_A 25 PVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVS 56 (67)
T ss_dssp CEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEE
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEe
Confidence 57889999999999999999888777777753
No 253
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=26.66 E-value=1.4e+02 Score=23.29 Aligned_cols=34 Identities=18% Similarity=0.060 Sum_probs=25.8
Q ss_pred CeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEEeCCC
Q 042644 93 SEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCVFPRG 130 (205)
Q Consensus 93 ~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~vP~G 130 (205)
.-++|+++|++.+.. ++. ....|.+||.+.+-..
T Consensus 141 ~~~v~~l~G~~~v~~---~~~-~~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 141 TLLLFAQQDGVAISL---QGQ-PRGQLAAHDCLCAEGL 174 (200)
T ss_dssp EEEEEESSSCEEEEE---TTE-EEEEECTTCEEEEESC
T ss_pred EEEEEEccCcEEEEc---CCC-ceeecCCCCEEEEeCC
Confidence 578899999998764 221 3689999999998544
No 254
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=24.51 E-value=32 Score=25.08 Aligned_cols=34 Identities=9% Similarity=-0.135 Sum_probs=29.1
Q ss_pred CCCHHHHHhhcCCCHHHHHHhhhcCCCcccEEEe
Q 042644 168 DTIDDLVRKFIPFLCWTIRVSEMSHFQDNKLKIM 201 (205)
Q Consensus 168 ~~~~evLa~af~v~~~~v~~l~~~~~~~~~i~i~ 201 (205)
..+.+.||+.++++..++.++..+-.+.|-|.|.
T Consensus 51 ~ps~~~LA~~~~~s~~~v~~~L~~L~~KGlI~i~ 84 (135)
T 2v79_A 51 FPTPNQLQEGMSISVEECTNRLRMFIQKGFLFIE 84 (135)
T ss_dssp SCCHHHHHTTSSSCHHHHHHHHHHHHHHTSCEEE
T ss_pred CCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEE
Confidence 4579999999999999999988888888877763
No 255
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=23.69 E-value=33 Score=25.50 Aligned_cols=11 Identities=9% Similarity=0.238 Sum_probs=7.1
Q ss_pred CCCHHHHHhhc
Q 042644 168 DTIDDLVRKFI 178 (205)
Q Consensus 168 ~~~~evLa~af 178 (205)
+++.+.+.+.+
T Consensus 178 g~sr~tvsR~l 188 (210)
T 3ryp_A 178 GCSRETVGRIL 188 (210)
T ss_dssp TCCHHHHHHHH
T ss_pred CCcHHHHHHHH
Confidence 46777777644
No 256
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=23.35 E-value=90 Score=25.10 Aligned_cols=23 Identities=30% Similarity=0.494 Sum_probs=19.2
Q ss_pred EEEEcCCCEEEeCCCCeeEEEec
Q 042644 116 QVMLKAGEVCVFPRGLLHFGFNV 138 (205)
Q Consensus 116 ~~~l~~GDv~~vP~G~~H~~~N~ 138 (205)
....++|+++++|.+..|...-+
T Consensus 159 ~V~P~~G~~v~F~s~~lH~v~pV 181 (243)
T 3dkq_A 159 SIKLSAGSLVLYPSSSLHQVTPV 181 (243)
T ss_dssp EECCCTTCEEEEETTSEEEECCE
T ss_pred EEecCCCEEEEECCCCeEcCccc
Confidence 45678999999999999998543
No 257
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=23.03 E-value=35 Score=25.82 Aligned_cols=9 Identities=0% Similarity=0.180 Sum_probs=4.7
Q ss_pred CCCHHHHHh
Q 042644 168 DTIDDLVRK 176 (205)
Q Consensus 168 ~~~~evLa~ 176 (205)
+++.+.+.+
T Consensus 198 g~sr~tvsR 206 (230)
T 3iwz_A 198 GCSREMAGR 206 (230)
T ss_dssp TCCHHHHHH
T ss_pred CCcHHHHHH
Confidence 345555554
No 258
>1jko_C HIN recombinase, DNA-invertase HIN; water-mediated recognition, protein-DNA complex, A10G mutant, DNA binding protein/DNA complex; 2.24A {Synthetic} SCOP: a.4.1.2 PDB: 1ijw_C* 1jj6_C* 1jj8_C* 1hcr_A 1jkp_C 1jkq_C 1jkr_C
Probab=22.95 E-value=83 Score=17.40 Aligned_cols=25 Identities=4% Similarity=-0.221 Sum_probs=21.1
Q ss_pred CCCHHHHHhhcCCCHHHHHHhhhcC
Q 042644 168 DTIDDLVRKFIPFLCWTIRVSEMSH 192 (205)
Q Consensus 168 ~~~~evLa~af~v~~~~v~~l~~~~ 192 (205)
+.+...+|+.++++..++.+.....
T Consensus 21 g~s~~~ia~~lgvs~~Tv~r~l~~~ 45 (52)
T 1jko_C 21 GHPRQQLAIIFGIGVSTLYRYFPAS 45 (52)
T ss_dssp TCCHHHHHHTTSCCHHHHHHHSCTT
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHc
Confidence 5788899999999999998876544
No 259
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=22.89 E-value=37 Score=25.77 Aligned_cols=11 Identities=9% Similarity=0.308 Sum_probs=6.1
Q ss_pred CCCHHHHHhhc
Q 042644 168 DTIDDLVRKFI 178 (205)
Q Consensus 168 ~~~~evLa~af 178 (205)
+++.+.+.+.+
T Consensus 186 g~sr~tvsR~l 196 (231)
T 3e97_A 186 SSSRETVSRVL 196 (231)
T ss_dssp TCCHHHHHHHH
T ss_pred CCcHHHHHHHH
Confidence 45666666543
No 260
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=22.78 E-value=41 Score=25.56 Aligned_cols=11 Identities=0% Similarity=-0.100 Sum_probs=6.3
Q ss_pred CCCHHHHHhhc
Q 042644 168 DTIDDLVRKFI 178 (205)
Q Consensus 168 ~~~~evLa~af 178 (205)
+++.+.+.+.+
T Consensus 191 g~sr~tvsR~l 201 (232)
T 2gau_A 191 NMTVSNAIRTL 201 (232)
T ss_dssp TSCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 45666666543
No 261
>1iyc_A Scarabaecin; antifungal peptide, antimicrobial peptide, beetle, chitin-binding, antifungal protein; NMR {Synthetic} SCOP: g.31.1.2
Probab=22.71 E-value=11 Score=20.75 Aligned_cols=11 Identities=55% Similarity=0.908 Sum_probs=8.8
Q ss_pred eeCCcCCCCCC
Q 042644 19 FINGLPCKSPD 29 (205)
Q Consensus 19 ~~~g~~ck~~~ 29 (205)
.-|||-||.|-
T Consensus 23 vwngfdckspf 33 (36)
T 1iyc_A 23 VWNGFDCKSPF 33 (36)
T ss_dssp EEETTEEECGG
T ss_pred eecCccccCcc
Confidence 57899999763
No 262
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=22.71 E-value=33 Score=22.65 Aligned_cols=32 Identities=6% Similarity=-0.042 Sum_probs=26.1
Q ss_pred CCHHHHHhhcCCCHHHHHHhhhcCCCcccEEE
Q 042644 169 TIDDLVRKFIPFLCWTIRVSEMSHFQDNKLKI 200 (205)
Q Consensus 169 ~~~evLa~af~v~~~~v~~l~~~~~~~~~i~i 200 (205)
.+.+-|+++|+++..++++-...-++.|.|.-
T Consensus 25 psv~EIa~~lgvS~~TVrr~L~~Le~kG~I~R 56 (77)
T 2jt1_A 25 VKTRDIADAAGLSIYQVRLYLEQLHDVGVLEK 56 (77)
T ss_dssp EEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred cCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEe
Confidence 46889999999999999887777777777654
No 263
>3p42_A Predicted protein; beta-grAsp, unknown function; HET: MSE; 1.91A {Escherichia coli O127}
Probab=22.62 E-value=85 Score=25.12 Aligned_cols=14 Identities=14% Similarity=-0.054 Sum_probs=11.2
Q ss_pred EEEcCCCEEEeCCC
Q 042644 117 VMLKAGEVCVFPRG 130 (205)
Q Consensus 117 ~~l~~GDv~~vP~G 130 (205)
..+.|||.++||..
T Consensus 190 ~~l~PG~~I~Vp~~ 203 (236)
T 3p42_A 190 VEPPPGSQLWLGFS 203 (236)
T ss_dssp EECCTTCEEEECBC
T ss_pred CCCCCCCEEEEeCC
Confidence 56888888888865
No 264
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=22.24 E-value=36 Score=25.21 Aligned_cols=11 Identities=9% Similarity=0.335 Sum_probs=7.6
Q ss_pred CCCHHHHHhhc
Q 042644 168 DTIDDLVRKFI 178 (205)
Q Consensus 168 ~~~~evLa~af 178 (205)
+++.+.+.+.+
T Consensus 175 g~sr~tvsR~l 185 (207)
T 2oz6_A 175 GCSREMVGRVL 185 (207)
T ss_dssp TSCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 56778887654
No 265
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=21.37 E-value=41 Score=25.45 Aligned_cols=11 Identities=18% Similarity=0.226 Sum_probs=7.1
Q ss_pred CCCHHHHHhhc
Q 042644 168 DTIDDLVRKFI 178 (205)
Q Consensus 168 ~~~~evLa~af 178 (205)
+++.+.+.+.+
T Consensus 188 g~sr~tvsR~l 198 (227)
T 3d0s_A 188 GASRETVNKAL 198 (227)
T ss_dssp TSCHHHHHHHH
T ss_pred CCcHHHHHHHH
Confidence 46777777644
No 266
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=21.33 E-value=1.3e+02 Score=28.90 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=24.0
Q ss_pred CCCeEEEEEecEEEEEEEeCCCeEEEEEEcCCCEEE
Q 042644 91 RASEMLFVFKGVVIAGFVDTNRQVFQVMLKAGEVCV 126 (205)
Q Consensus 91 ~a~Ei~yVl~G~~~v~~~~~~~~~~~~~l~~GDv~~ 126 (205)
....+++|++|++.|.. +++....+|++||.|=
T Consensus 378 ~gds~YIIlsG~V~V~~---~~~~~v~~L~~Gd~FG 410 (999)
T 4f7z_A 378 EGTSWYIILKGSVNVVI---YGKGVVCTLHEGDDFG 410 (999)
T ss_dssp BCCEEEEEEESEEEEEE---TTTEEEEEEETTCEEC
T ss_pred cCCeEEEEEeeEEEEEE---cCCcceEEecCCCccc
Confidence 45678889999998753 2333467899999884
No 267
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=21.19 E-value=40 Score=25.07 Aligned_cols=11 Identities=27% Similarity=0.495 Sum_probs=7.8
Q ss_pred CCCHHHHHhhc
Q 042644 168 DTIDDLVRKFI 178 (205)
Q Consensus 168 ~~~~evLa~af 178 (205)
+++.+.+.+.+
T Consensus 157 g~sr~tvsR~l 167 (202)
T 2zcw_A 157 GSVRETVTKVI 167 (202)
T ss_dssp TCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 57788888654
No 268
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=21.09 E-value=39 Score=25.20 Aligned_cols=6 Identities=17% Similarity=0.141 Sum_probs=2.4
Q ss_pred CHHHHH
Q 042644 170 IDDLVR 175 (205)
Q Consensus 170 ~~evLa 175 (205)
+++.+.
T Consensus 176 sr~tvs 181 (216)
T 4ev0_A 176 SRETVS 181 (216)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 334443
No 269
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=20.95 E-value=1.6e+02 Score=25.25 Aligned_cols=32 Identities=31% Similarity=0.363 Sum_probs=26.4
Q ss_pred EEEEEcCCCEEEeCCCCeeEEEecCCccEEEE
Q 042644 115 FQVMLKAGEVCVFPRGLLHFGFNVGYEFATVF 146 (205)
Q Consensus 115 ~~~~l~~GDv~~vP~G~~H~~~N~g~~~a~~l 146 (205)
....-++||.++.-+|..|+..|.|-.-++.+
T Consensus 262 ~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAv 293 (354)
T 3dxt_A 262 NRITQEAGEFMVTFPYGYHAGFNHGFNCAEAI 293 (354)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred EEEEeCCCcEEEECCCceEEEeeccccHhHhh
Confidence 45777999999999999999999996655443
No 270
>1ufm_A COP9 complex subunit 4; helix-turn-helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.4.5.47
Probab=20.43 E-value=34 Score=22.96 Aligned_cols=29 Identities=0% Similarity=-0.061 Sum_probs=23.3
Q ss_pred CCCHHHHHhhcCCCHHHHHHhhhcCCCcc
Q 042644 168 DTIDDLVRKFIPFLCWTIRVSEMSHFQDN 196 (205)
Q Consensus 168 ~~~~evLa~af~v~~~~v~~l~~~~~~~~ 196 (205)
.+.-+-||+.|++++++++++.++...++
T Consensus 30 ~Isl~~La~ll~ls~~~vE~~ls~mI~~~ 58 (84)
T 1ufm_A 30 NITFEELGALLEIPAAKAEKIASQMITEG 58 (84)
T ss_dssp EEEHHHHHHHTTSCHHHHHHHHHHHHHTT
T ss_pred eeeHHHHHHHHCcCHHHHHHHHHHHHhCC
Confidence 57789999999999999998877654443
Done!