Query 042646
Match_columns 560
No_of_seqs 133 out of 461
Neff 2.2
Searched_HMMs 46136
Date Fri Mar 29 08:14:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042646.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042646hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02245 HAD_IIID1 HAD-superf 99.7 8.6E-18 1.9E-22 157.4 6.2 61 489-559 15-75 (195)
2 TIGR02251 HIF-SF_euk Dullard-l 99.6 4.7E-16 1E-20 138.5 5.8 64 495-559 1-72 (162)
3 PF03031 NIF: NLI interacting 99.6 1.1E-15 2.3E-20 131.8 5.5 62 496-559 1-66 (159)
4 KOG1605 TFIIF-interacting CTD 99.5 6.7E-15 1.5E-19 144.1 1.4 68 492-559 86-161 (262)
5 TIGR02250 FCP1_euk FCP1-like p 99.3 8.5E-13 1.8E-17 118.5 4.6 68 492-559 3-88 (156)
6 smart00577 CPDc catalytic doma 99.3 8.1E-12 1.7E-16 108.9 6.1 66 494-559 1-75 (148)
7 COG5190 FCP1 TFIIF-interacting 98.5 5E-08 1.1E-12 100.9 4.1 76 484-559 201-282 (390)
8 KOG2832 TFIIF-interacting CTD 97.9 1E-05 2.2E-10 84.2 5.4 62 488-558 182-243 (393)
9 TIGR01681 HAD-SF-IIIC HAD-supe 97.4 0.00012 2.5E-09 63.3 3.0 58 496-558 1-60 (128)
10 KOG0323 TFIIF-interacting CTD 97.1 0.00021 4.5E-09 78.5 2.2 64 496-559 147-231 (635)
11 cd01427 HAD_like Haloacid deha 97.0 0.00061 1.3E-08 53.5 3.5 53 497-558 1-54 (139)
12 TIGR01684 viral_ppase viral ph 96.9 0.00097 2.1E-08 67.9 4.2 50 494-558 125-176 (301)
13 COG4996 Predicted phosphatase 96.8 0.002 4.4E-08 60.7 5.5 55 497-551 2-64 (164)
14 PHA03398 viral phosphatase sup 96.6 0.0021 4.5E-08 65.7 4.3 51 493-558 126-178 (303)
15 TIGR01662 HAD-SF-IIIA HAD-supe 96.3 0.0038 8.2E-08 52.5 3.6 50 496-554 1-51 (132)
16 TIGR01685 MDP-1 magnesium-depe 96.1 0.011 2.4E-07 55.1 5.6 64 495-558 2-76 (174)
17 TIGR01656 Histidinol-ppas hist 96.0 0.011 2.4E-07 51.6 4.8 52 496-554 1-53 (147)
18 PF08645 PNK3P: Polynucleotide 95.6 0.024 5.2E-07 51.6 5.6 52 496-552 1-53 (159)
19 PRK08942 D,D-heptose 1,7-bisph 95.1 0.037 8E-07 49.5 5.0 52 495-554 3-55 (181)
20 TIGR01689 EcbF-BcbF capsule bi 95.1 0.035 7.6E-07 49.9 4.8 51 496-557 2-53 (126)
21 TIGR01664 DNA-3'-Pase DNA 3'-p 94.8 0.061 1.3E-06 49.0 5.8 56 494-555 12-69 (166)
22 PF12689 Acid_PPase: Acid Phos 94.7 0.03 6.5E-07 52.5 3.7 64 494-557 2-75 (169)
23 TIGR01686 FkbH FkbH-like domai 94.6 0.034 7.5E-07 54.8 4.0 58 494-558 2-61 (320)
24 TIGR01533 lipo_e_P4 5'-nucleot 94.5 0.038 8.3E-07 54.9 4.0 65 493-557 73-147 (266)
25 TIGR01672 AphA HAD superfamily 94.4 0.059 1.3E-06 52.5 5.0 61 494-554 62-140 (237)
26 PRK13582 thrH phosphoserine ph 93.6 0.016 3.5E-07 51.6 -0.5 33 527-559 66-98 (205)
27 PRK05446 imidazole glycerol-ph 93.5 0.14 3E-06 52.9 5.9 54 494-553 1-55 (354)
28 TIGR01261 hisB_Nterm histidino 93.2 0.16 3.4E-06 46.3 5.1 53 495-553 1-54 (161)
29 TIGR01663 PNK-3'Pase polynucle 92.9 0.15 3.3E-06 55.2 5.4 57 493-555 166-224 (526)
30 PLN02954 phosphoserine phospha 91.9 0.091 2E-06 47.6 1.8 32 528-559 83-115 (224)
31 PRK11009 aphA acid phosphatase 91.9 0.32 6.9E-06 47.7 5.6 61 494-554 62-140 (237)
32 PF05152 DUF705: Protein of un 91.7 0.23 4.9E-06 51.3 4.6 52 494-559 121-173 (297)
33 smart00775 LNS2 LNS2 domain. T 90.7 0.34 7.4E-06 44.0 4.2 51 497-554 1-53 (157)
34 PHA02530 pseT polynucleotide k 90.6 0.41 9E-06 45.6 4.9 60 494-558 157-217 (300)
35 TIGR01670 YrbI-phosphatas 3-de 90.3 0.32 7E-06 43.3 3.7 56 496-558 2-58 (154)
36 PRK06769 hypothetical protein; 89.9 0.54 1.2E-05 42.7 4.9 50 495-554 4-54 (173)
37 TIGR01668 YqeG_hyp_ppase HAD s 89.8 0.46 9.9E-06 43.0 4.3 46 493-554 23-69 (170)
38 PRK10187 trehalose-6-phosphate 89.5 0.6 1.3E-05 45.4 5.1 18 494-511 13-30 (266)
39 PHA02597 30.2 hypothetical pro 89.2 0.19 4.2E-06 44.9 1.4 26 528-553 73-98 (197)
40 COG1877 OtsB Trehalose-6-phosp 89.1 0.5 1.1E-05 47.5 4.4 55 488-554 11-67 (266)
41 PLN02645 phosphoglycolate phos 89.1 0.55 1.2E-05 46.4 4.6 43 494-554 27-70 (311)
42 PRK10725 fructose-1-P/6-phosph 88.8 0.21 4.5E-06 43.8 1.4 27 531-558 90-116 (188)
43 PF13344 Hydrolase_6: Haloacid 88.8 0.87 1.9E-05 38.6 5.0 40 498-555 1-41 (101)
44 PRK11587 putative phosphatase; 87.6 0.29 6.3E-06 44.8 1.5 30 528-557 82-112 (218)
45 TIGR02009 PGMB-YQAB-SF beta-ph 87.1 0.29 6.3E-06 42.5 1.2 26 528-553 87-113 (185)
46 PLN02151 trehalose-phosphatase 87.1 0.64 1.4E-05 48.5 3.8 51 492-554 95-145 (354)
47 TIGR03351 PhnX-like phosphonat 86.9 0.33 7.1E-06 43.9 1.5 31 528-558 86-117 (220)
48 PRK13288 pyrophosphatase PpaX; 86.2 0.4 8.6E-06 43.5 1.6 31 528-558 81-112 (214)
49 PLN02580 trehalose-phosphatase 86.1 0.75 1.6E-05 48.5 3.8 52 492-555 116-167 (384)
50 PTZ00174 phosphomannomutase; P 85.7 0.46 9.9E-06 45.1 1.8 18 494-511 4-21 (247)
51 TIGR01548 HAD-SF-IA-hyp1 haloa 85.6 0.37 8E-06 43.4 1.1 26 533-558 110-136 (197)
52 TIGR02253 CTE7 HAD superfamily 85.6 0.44 9.6E-06 42.8 1.6 30 528-557 93-123 (221)
53 TIGR02252 DREG-2 REG-2-like, H 85.3 0.43 9.3E-06 42.6 1.3 27 529-555 105-132 (203)
54 PRK11590 hypothetical protein; 85.2 0.48 1E-05 43.8 1.6 32 528-559 94-127 (211)
55 PRK10976 putative hydrolase; P 84.8 0.49 1.1E-05 44.3 1.5 16 495-510 2-17 (266)
56 PRK13226 phosphoglycolate phos 84.6 0.45 9.8E-06 44.3 1.2 31 528-558 94-125 (229)
57 PRK01158 phosphoglycolate phos 84.5 0.53 1.1E-05 42.8 1.6 16 495-510 3-18 (230)
58 PRK10530 pyridoxal phosphate ( 84.5 0.54 1.2E-05 43.6 1.6 16 495-510 3-18 (272)
59 TIGR01993 Pyr-5-nucltdase pyri 84.2 0.54 1.2E-05 41.7 1.5 27 530-558 85-111 (184)
60 PRK13478 phosphonoacetaldehyde 84.1 0.52 1.1E-05 44.7 1.4 31 528-558 100-131 (267)
61 PRK03669 mannosyl-3-phosphogly 84.0 0.7 1.5E-05 44.1 2.2 18 493-510 5-22 (271)
62 PRK13223 phosphoglycolate phos 84.0 0.61 1.3E-05 45.1 1.8 30 529-558 101-131 (272)
63 PLN02770 haloacid dehalogenase 83.8 0.52 1.1E-05 44.6 1.3 31 528-558 107-138 (248)
64 TIGR01422 phosphonatase phosph 83.6 0.58 1.3E-05 43.7 1.5 31 528-558 98-129 (253)
65 PRK10748 flavin mononucleotide 83.3 0.56 1.2E-05 44.0 1.3 26 530-555 114-139 (238)
66 PRK10513 sugar phosphate phosp 83.3 0.61 1.3E-05 43.6 1.5 16 495-510 3-18 (270)
67 PLN03017 trehalose-phosphatase 83.1 1.3 2.8E-05 46.6 3.9 19 492-510 108-126 (366)
68 PRK15126 thiamin pyrimidine py 82.7 0.64 1.4E-05 43.9 1.4 16 495-510 2-17 (272)
69 PLN03243 haloacid dehalogenase 82.4 0.56 1.2E-05 45.6 0.9 31 528-558 108-139 (260)
70 TIGR02254 YjjG/YfnB HAD superf 82.2 0.65 1.4E-05 41.5 1.2 31 528-558 96-126 (224)
71 PRK13222 phosphoglycolate phos 82.0 0.68 1.5E-05 41.6 1.3 31 528-558 92-123 (226)
72 PRK09449 dUMP phosphatase; Pro 81.9 0.68 1.5E-05 42.0 1.2 30 528-557 94-123 (224)
73 COG2503 Predicted secreted aci 81.9 1.5 3.2E-05 45.0 3.7 61 493-553 77-146 (274)
74 PRK08238 hypothetical protein; 81.6 1.6 3.6E-05 46.7 4.1 31 529-559 72-103 (479)
75 TIGR01990 bPGM beta-phosphoglu 81.5 0.64 1.4E-05 40.4 0.9 25 529-553 87-112 (185)
76 PRK14501 putative bifunctional 81.4 1.5 3.3E-05 48.2 3.9 51 493-555 490-542 (726)
77 TIGR01487 SPP-like sucrose-pho 81.4 0.77 1.7E-05 41.9 1.4 14 496-509 2-15 (215)
78 TIGR01428 HAD_type_II 2-haloal 81.3 0.76 1.7E-05 41.0 1.3 31 528-558 91-122 (198)
79 COG0546 Gph Predicted phosphat 81.0 0.81 1.8E-05 42.6 1.4 31 528-558 88-119 (220)
80 TIGR01549 HAD-SF-IA-v1 haloaci 80.9 0.67 1.5E-05 39.5 0.8 31 528-558 63-94 (154)
81 PRK10826 2-deoxyglucose-6-phos 80.7 0.82 1.8E-05 41.8 1.3 31 528-558 91-122 (222)
82 PRK10563 6-phosphogluconate ph 80.7 0.8 1.7E-05 41.6 1.2 29 528-558 87-115 (221)
83 PRK09484 3-deoxy-D-manno-octul 80.7 2.2 4.7E-05 39.1 4.0 16 494-509 20-35 (183)
84 PRK14988 GMP/IMP nucleotidase; 80.6 1.1 2.3E-05 42.1 2.1 31 528-558 92-123 (224)
85 TIGR01491 HAD-SF-IB-PSPlk HAD- 80.6 0.92 2E-05 39.9 1.6 31 528-558 79-110 (201)
86 TIGR01454 AHBA_synth_RP 3-amin 80.1 0.66 1.4E-05 41.8 0.5 31 528-558 74-105 (205)
87 COG0561 Cof Predicted hydrolas 79.8 1 2.2E-05 42.3 1.6 19 494-512 2-20 (264)
88 COG3882 FkbH Predicted enzyme 79.5 0.95 2E-05 50.0 1.5 19 492-510 219-237 (574)
89 PLN02779 haloacid dehalogenase 79.4 0.9 2E-05 44.5 1.2 30 529-558 144-174 (286)
90 TIGR01449 PGP_bact 2-phosphogl 79.0 0.75 1.6E-05 41.0 0.5 31 528-558 84-115 (213)
91 PRK13225 phosphoglycolate phos 78.8 0.91 2E-05 44.6 1.1 31 529-559 142-173 (273)
92 TIGR02247 HAD-1A3-hyp Epoxide 78.6 1.1 2.5E-05 40.3 1.5 29 528-556 93-122 (211)
93 TIGR01493 HAD-SF-IA-v2 Haloaci 78.6 0.99 2.1E-05 39.3 1.1 13 498-510 2-14 (175)
94 TIGR00338 serB phosphoserine p 78.5 1.2 2.6E-05 40.3 1.7 32 527-558 83-115 (219)
95 PRK00192 mannosyl-3-phosphogly 78.5 1.1 2.3E-05 42.9 1.4 15 495-509 4-18 (273)
96 TIGR01675 plant-AP plant acid 78.1 1.9 4.1E-05 42.7 3.0 65 492-556 74-148 (229)
97 PF08282 Hydrolase_3: haloacid 77.6 1.4 2.9E-05 38.9 1.7 15 498-512 1-15 (254)
98 PF13419 HAD_2: Haloacid dehal 77.2 1.2 2.5E-05 37.1 1.1 33 526-558 74-107 (176)
99 COG0637 Predicted phosphatase/ 76.2 1.3 2.9E-05 41.7 1.3 32 527-558 84-116 (221)
100 COG0241 HisB Histidinol phosph 75.5 3.6 7.8E-05 39.7 4.0 50 495-552 5-55 (181)
101 TIGR02463 MPGP_rel mannosyl-3- 75.0 1.4 3E-05 40.2 1.1 14 497-510 1-14 (221)
102 TIGR00685 T6PP trehalose-phosp 74.8 2 4.4E-05 40.7 2.1 17 494-510 2-18 (244)
103 PF03767 Acid_phosphat_B: HAD 73.8 1 2.2E-05 43.5 -0.1 63 493-556 70-143 (229)
104 TIGR00099 Cof-subfamily Cof su 73.5 1.6 3.4E-05 40.9 1.0 14 497-510 1-14 (256)
105 TIGR01489 DKMTPPase-SF 2,3-dik 73.2 2.1 4.5E-05 37.1 1.7 31 528-558 71-102 (188)
106 PRK14502 bifunctional mannosyl 72.3 6.1 0.00013 45.0 5.4 27 484-510 405-431 (694)
107 PLN02423 phosphomannomutase 71.6 2.7 5.8E-05 40.4 2.1 18 494-511 6-23 (245)
108 TIGR01484 HAD-SF-IIB HAD-super 71.4 1.9 4.1E-05 38.7 1.0 14 497-510 1-14 (204)
109 PRK06698 bifunctional 5'-methy 70.9 1.7 3.6E-05 45.1 0.7 32 528-559 329-361 (459)
110 TIGR01680 Veg_Stor_Prot vegeta 70.5 4.9 0.00011 41.2 3.8 63 494-556 100-173 (275)
111 TIGR01485 SPP_plant-cyano sucr 70.3 2.4 5.2E-05 39.9 1.5 14 495-508 1-14 (249)
112 COG5190 FCP1 TFIIF-interacting 70.0 3.4 7.4E-05 44.1 2.7 68 491-558 22-105 (390)
113 PLN02887 hydrolase family prot 69.9 5.7 0.00012 43.9 4.4 17 494-510 307-323 (580)
114 TIGR01509 HAD-SF-IA-v3 haloaci 69.6 2.1 4.5E-05 36.9 0.9 29 528-556 84-113 (183)
115 TIGR02461 osmo_MPG_phos mannos 69.3 2.2 4.8E-05 40.5 1.1 13 497-509 1-13 (225)
116 TIGR01486 HAD-SF-IIB-MPGP mann 69.2 2.1 4.6E-05 40.3 0.9 15 497-511 1-15 (256)
117 COG0560 SerB Phosphoserine pho 69.2 2.6 5.7E-05 40.3 1.5 31 528-558 76-107 (212)
118 PTZ00445 p36-lilke protein; Pr 68.6 6.4 0.00014 39.4 4.1 61 493-555 41-102 (219)
119 PRK12702 mannosyl-3-phosphogly 68.3 2.8 6E-05 43.5 1.6 16 495-510 1-16 (302)
120 TIGR01482 SPP-subfamily Sucros 67.8 2.2 4.7E-05 38.6 0.7 14 498-511 1-14 (225)
121 PLN02940 riboflavin kinase 67.6 2.6 5.6E-05 43.4 1.2 31 528-558 92-123 (382)
122 TIGR02471 sucr_syn_bact_C sucr 66.3 2.6 5.7E-05 39.1 0.9 13 497-509 1-13 (236)
123 PRK09456 ?-D-glucose-1-phospha 64.8 3.6 7.9E-05 37.2 1.5 29 528-556 83-112 (199)
124 PLN02575 haloacid dehalogenase 64.2 3.3 7.3E-05 43.6 1.3 31 529-559 216-247 (381)
125 PRK11133 serB phosphoserine ph 62.2 4.9 0.00011 40.9 2.0 30 528-557 180-210 (322)
126 TIGR01458 HAD-SF-IIA-hyp3 HAD- 60.2 4.7 0.0001 38.9 1.4 16 496-511 2-17 (257)
127 COG1011 Predicted hydrolase (H 59.6 5.2 0.00011 35.9 1.5 27 528-554 98-124 (229)
128 PRK09552 mtnX 2-hydroxy-3-keto 59.3 5 0.00011 37.1 1.4 33 527-559 72-105 (219)
129 TIGR01545 YfhB_g-proteo haloac 58.3 5.4 0.00012 37.7 1.4 30 529-558 94-125 (210)
130 TIGR02137 HSK-PSP phosphoserin 57.8 5.5 0.00012 37.6 1.4 12 496-507 2-13 (203)
131 PF09419 PGP_phosphatase: Mito 57.1 15 0.00033 35.0 4.2 48 490-553 36-86 (168)
132 TIGR01488 HAD-SF-IB Haloacid D 56.0 5.1 0.00011 34.7 0.8 32 528-559 72-104 (177)
133 PRK10444 UMP phosphatase; Prov 55.0 6.6 0.00014 38.2 1.4 15 496-510 2-16 (248)
134 PLN02382 probable sucrose-phos 54.8 7.9 0.00017 40.6 2.1 17 493-509 7-23 (413)
135 TIGR00213 GmhB_yaeD D,D-heptos 54.7 6.9 0.00015 35.2 1.5 13 496-508 2-14 (176)
136 TIGR01457 HAD-SF-IIA-hyp2 HAD- 54.5 6.6 0.00014 37.7 1.4 16 496-511 2-17 (249)
137 PF05116 S6PP: Sucrose-6F-phos 52.9 8.5 0.00018 37.2 1.8 13 495-507 2-14 (247)
138 PLN03063 alpha,alpha-trehalose 50.3 19 0.0004 41.1 4.2 53 493-554 505-559 (797)
139 PLN02205 alpha,alpha-trehalose 49.3 22 0.00048 41.1 4.6 18 493-510 594-611 (854)
140 PLN03064 alpha,alpha-trehalose 49.2 21 0.00045 42.0 4.5 60 493-555 589-650 (934)
141 TIGR01490 HAD-SF-IB-hyp1 HAD-s 47.9 8.4 0.00018 34.4 0.9 15 497-511 1-15 (202)
142 TIGR01452 PGP_euk phosphoglyco 46.9 10 0.00022 36.7 1.4 15 496-510 3-17 (279)
143 PF12710 HAD: haloacid dehalog 45.2 12 0.00026 32.6 1.4 28 531-558 87-119 (192)
144 PF00702 Hydrolase: haloacid d 45.0 13 0.00028 32.7 1.6 27 529-555 127-154 (215)
145 PF15006 DUF4517: Domain of un 44.9 10 0.00022 36.3 1.0 26 358-384 131-158 (163)
146 PF08235 LNS2: LNS2 (Lipin/Ned 44.8 27 0.00059 33.2 3.7 50 498-553 2-52 (157)
147 COG2179 Predicted hydrolase of 44.4 13 0.00028 36.4 1.6 17 492-508 25-41 (175)
148 COG4359 Uncharacterized conser 43.6 17 0.00037 36.6 2.3 32 527-558 71-103 (220)
149 PF06941 NT5C: 5' nucleotidase 43.0 14 0.0003 33.8 1.5 29 528-556 72-101 (191)
150 TIGR01544 HAD-SF-IE haloacid d 42.7 16 0.00035 37.2 2.1 32 527-558 119-151 (277)
151 PRK09552 mtnX 2-hydroxy-3-keto 42.2 18 0.0004 33.4 2.2 16 495-510 3-18 (219)
152 TIGR02726 phenyl_P_delta pheny 41.8 30 0.00064 32.4 3.5 15 495-509 7-21 (169)
153 TIGR01456 CECR5 HAD-superfamil 40.1 15 0.00033 36.7 1.4 14 497-510 2-15 (321)
154 PLN02919 haloacid dehalogenase 38.8 14 0.00031 43.2 1.2 30 530-559 162-192 (1057)
155 TIGR03333 salvage_mtnX 2-hydro 34.8 28 0.00061 32.2 2.2 33 527-559 68-101 (214)
156 TIGR01460 HAD-SF-IIA Haloacid 29.7 22 0.00048 33.8 0.6 14 498-511 1-14 (236)
157 TIGR01488 HAD-SF-IB Haloacid D 29.6 41 0.00088 29.1 2.2 14 497-510 1-14 (177)
158 TIGR01491 HAD-SF-IB-PSPlk HAD- 29.2 40 0.00088 29.7 2.1 15 495-509 4-18 (201)
159 COG1778 Low specificity phosph 28.6 31 0.00067 33.8 1.4 17 494-510 7-23 (170)
160 KOG2134 Polynucleotide kinase 23.8 1E+02 0.0022 33.9 4.3 54 493-552 73-128 (422)
161 PLN02177 glycerol-3-phosphate 23.7 59 0.0013 35.6 2.6 17 493-509 20-36 (497)
162 TIGR02253 CTE7 HAD superfamily 23.5 66 0.0014 29.1 2.5 16 495-510 2-17 (221)
163 PF13419 HAD_2: Haloacid dehal 23.4 88 0.0019 26.0 3.0 14 498-511 1-14 (176)
164 PF11019 DUF2608: Protein of u 21.9 51 0.0011 32.7 1.6 63 494-557 19-110 (252)
165 KOG2422 Uncharacterized conser 20.5 74 0.0016 36.5 2.6 43 79-121 74-116 (665)
166 TIGR01509 HAD-SF-IA-v3 haloaci 20.1 96 0.0021 26.7 2.7 12 498-509 2-13 (183)
No 1
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=99.71 E-value=8.6e-18 Score=157.35 Aligned_cols=61 Identities=31% Similarity=0.451 Sum_probs=52.0
Q ss_pred CCCCCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646 489 CIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT 559 (560)
Q Consensus 489 ~i~~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd 559 (560)
....++||||||||||||||+.... .++++++||||++||++|+++|||+||||++++||+
T Consensus 15 ~~~~~~kklLVLDLDeTLvh~~~~~----------~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~ 75 (195)
T TIGR02245 15 NPPREGKKLLVLDIDYTLFDHRSPA----------ETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIE 75 (195)
T ss_pred CCCCCCCcEEEEeCCCceEcccccC----------CCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHH
Confidence 4445689999999999999973211 135899999999999999999999999999999985
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=99.62 E-value=4.7e-16 Score=138.53 Aligned_cols=64 Identities=30% Similarity=0.335 Sum_probs=54.4
Q ss_pred CeEEEEecCcccccccCCCCCCCCCCee--------eccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646 495 KKLLVLDLNGLLVDIVASPYHRYRPDKM--------VSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT 559 (560)
Q Consensus 495 KKLLVLDLDETLVHSSskpp~g~kPDfk--------V~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd 559 (560)
|++|||||||||||++..++.. ..|+. ...+||++|||+++||+++.++|+|+||||+.+.||+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~ 72 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKV-DADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYAD 72 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCC-CCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHH
Confidence 6899999999999998776431 23332 2468999999999999999999999999999999985
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=99.59 E-value=1.1e-15 Score=131.80 Aligned_cols=62 Identities=32% Similarity=0.359 Sum_probs=48.8
Q ss_pred eEEEEecCcccccccCCCCCCCCCCe----eeccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646 496 KLLVLDLNGLLVDIVASPYHRYRPDK----MVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT 559 (560)
Q Consensus 496 KLLVLDLDETLVHSSskpp~g~kPDf----kV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd 559 (560)
|||||||||||||+...... ..|+ ....++|++|||+++||+++.++|+|+|||++++.|++
T Consensus 1 k~LVlDLD~TLv~~~~~~~~--~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~ 66 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPL--PYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAE 66 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCT--T-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHH
T ss_pred CEEEEeCCCcEEEEeecCCC--CcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhh
Confidence 79999999999999866542 2233 34678999999999999999999999999999999974
No 4
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.48 E-value=6.7e-15 Score=144.10 Aligned_cols=68 Identities=28% Similarity=0.308 Sum_probs=56.6
Q ss_pred CCCCeEEEEecCccccccc--CCCCC--C----CCCCeeeccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646 492 HSKKKLLVLDLNGLLVDIV--ASPYH--R----YRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT 559 (560)
Q Consensus 492 ~~KKKLLVLDLDETLVHSS--skpp~--g----~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd 559 (560)
..+||+|||||||||+|++ +++.. . ...+...+.+||++|||+++||..+.+|||+|||||+.+.|++
T Consensus 86 ~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~ 161 (262)
T KOG1605|consen 86 TVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLEVYAD 161 (262)
T ss_pred cCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHH
Confidence 5689999999999999999 44422 1 1223334778999999999999999999999999999999985
No 5
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.33 E-value=8.5e-13 Score=118.55 Aligned_cols=68 Identities=26% Similarity=0.283 Sum_probs=54.2
Q ss_pred CCCCeEEEEecCcccccccCCCCCCC-------C------CC---eee--ccceeEeCccHHHHHHHHHhccEEEEEccc
Q 042646 492 HSKKKLLVLDLNGLLVDIVASPYHRY-------R------PD---KMV--SNKAVFKRPCCDEFLSFCFERFNVGVWSRG 553 (560)
Q Consensus 492 ~~KKKLLVLDLDETLVHSSskpp~g~-------k------PD---fkV--~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS 553 (560)
..+|++|||||||||||+...+.... . ++ |.. ..+++.+|||+.+||+++.++|+++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 35899999999999999987652210 0 11 111 346899999999999999999999999999
Q ss_pred cccccc
Q 042646 554 SRKIWT 559 (560)
Q Consensus 554 ~~kYVd 559 (560)
.+.||+
T Consensus 83 ~~~yA~ 88 (156)
T TIGR02250 83 TRAYAQ 88 (156)
T ss_pred cHHHHH
Confidence 999985
No 6
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.25 E-value=8.1e-12 Score=108.94 Aligned_cols=66 Identities=38% Similarity=0.433 Sum_probs=52.5
Q ss_pred CCeEEEEecCcccccccCCCC-CCCCCCeee--------ccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646 494 KKKLLVLDLNGLLVDIVASPY-HRYRPDKMV--------SNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT 559 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSskpp-~g~kPDfkV--------~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd 559 (560)
+|++|||||||||+|++.... +...+++.+ ..+++..|||+.+||+++.+.|.++|||++...|++
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~ 75 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYAD 75 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHH
Confidence 589999999999999864221 112233332 467899999999999999999999999999998875
No 7
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.55 E-value=5e-08 Score=100.95 Aligned_cols=76 Identities=24% Similarity=0.130 Sum_probs=60.5
Q ss_pred CCCCCCCCCCCCeEEEEecCcccccccCCCCCCC------CCCeeeccceeEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646 484 PPGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRY------RPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKI 557 (560)
Q Consensus 484 sP~r~~i~~~KKKLLVLDLDETLVHSSskpp~g~------kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kY 557 (560)
++.........+++|+||||+||+|+++...... .-+...+.++|.+||+|+.||.+++++|+|++||++.+.|
T Consensus 201 l~~~~~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y 280 (390)
T COG5190 201 LEPPVSKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRY 280 (390)
T ss_pred ccchhhcCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhh
Confidence 4445555666899999999999999987654311 1122337789999999999999999999999999999998
Q ss_pred cc
Q 042646 558 WT 559 (560)
Q Consensus 558 Vd 559 (560)
++
T Consensus 281 ~~ 282 (390)
T COG5190 281 AD 282 (390)
T ss_pred cc
Confidence 75
No 8
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=97.94 E-value=1e-05 Score=84.24 Aligned_cols=62 Identities=24% Similarity=0.148 Sum_probs=49.8
Q ss_pred CCCCCCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccEEEEEcccccccc
Q 042646 488 VCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIW 558 (560)
Q Consensus 488 ~~i~~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYV 558 (560)
.+...+.+.+|||||.++|||.-.... .+..+.+||++|.||..|...|||||||+.+.-++
T Consensus 182 ~pPy~Qp~yTLVleledvLVhpdws~~---------tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~ 243 (393)
T KOG2832|consen 182 PPPYEQPPYTLVLELEDVLVHPDWSYK---------TGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTV 243 (393)
T ss_pred CCcccCCCceEEEEeeeeEeccchhhh---------cCceeccCchHHHHHHhhcccceEEEEecCCccch
Confidence 334445789999999999999532111 45678999999999999999999999999887655
No 9
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.39 E-value=0.00012 Score=63.25 Aligned_cols=58 Identities=16% Similarity=0.087 Sum_probs=39.9
Q ss_pred eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccc-ccccc
Q 042646 496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRG-SRKIW 558 (560)
Q Consensus 496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS-~~kYV 558 (560)
|+||+|||||||+.-... ...+..+.. . ...|++.++|+++.++ |.++|.|++ .++++
T Consensus 1 kli~~DlD~Tl~~~~~~~---~~~~~~~~~-~-~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~ 60 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIV---VGEDPIIDL-E-VTIKEIRDKLQTLKKNGFLLALASYNDDPHVA 60 (128)
T ss_pred CEEEEeCCCCCCCCCccc---ccCCcchhh-H-HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHH
Confidence 689999999999863210 011110000 0 3579999999999875 999999999 66654
No 10
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=97.13 E-value=0.00021 Score=78.49 Aligned_cols=64 Identities=27% Similarity=0.340 Sum_probs=49.3
Q ss_pred eEEEEecCcccccccCCCCCC-------------------CCCCeee--ccceeEeCccHHHHHHHHHhccEEEEEcccc
Q 042646 496 KLLVLDLNGLLVDIVASPYHR-------------------YRPDKMV--SNKAVFKRPCCDEFLSFCFERFNVGVWSRGS 554 (560)
Q Consensus 496 KLLVLDLDETLVHSSskpp~g-------------------~kPDfkV--~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~ 554 (560)
-.||+|||-||+|....+.-. +..+... ..|||..|||+.+||+++.+.|++.|+|-+.
T Consensus 147 L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyTmg~ 226 (635)
T KOG0323|consen 147 LHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYTMGT 226 (635)
T ss_pred ceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEeccc
Confidence 489999999999976432100 0001001 3489999999999999999999999999999
Q ss_pred ccccc
Q 042646 555 RKIWT 559 (560)
Q Consensus 555 ~kYVd 559 (560)
+.||.
T Consensus 227 R~YA~ 231 (635)
T KOG0323|consen 227 RDYAL 231 (635)
T ss_pred hHHHH
Confidence 99985
No 11
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.04 E-value=0.00061 Score=53.49 Aligned_cols=53 Identities=21% Similarity=0.206 Sum_probs=40.7
Q ss_pred EEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 497 LLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 497 LLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
++|||+||||+........ ...+..+|.+.+||+.+.++ +.++|.|++...++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~ 54 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---------IEELELYPGVKEALKELKEKGIKLALATNKSRREV 54 (139)
T ss_pred CeEEccCCceEccCccccc---------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHH
Confidence 5899999999886432110 22467899999999999987 99999999876543
No 12
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=96.88 E-value=0.00097 Score=67.93 Aligned_cols=50 Identities=26% Similarity=0.307 Sum_probs=42.7
Q ss_pred CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeC-ccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKR-PCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKR-PhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
..+++|+||||||+.... .|..| |++.++|+++.+. +.++|||++.+..+
T Consensus 125 ~~kvIvFDLDgTLi~~~~---------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v 176 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEE---------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHV 176 (301)
T ss_pred cceEEEEecCCCCcCCCC---------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence 578999999999987631 25688 9999999999997 89999999887765
No 13
>COG4996 Predicted phosphatase [General function prediction only]
Probab=96.82 E-value=0.002 Score=60.75 Aligned_cols=55 Identities=22% Similarity=0.297 Sum_probs=40.6
Q ss_pred EEEEecCccccc----ccCCCC-CCCCCCeee--ccceeEeCccHHHHHHHHHhc-cEEEEEc
Q 042646 497 LLVLDLNGLLVD----IVASPY-HRYRPDKMV--SNKAVFKRPCCDEFLSFCFER-FNVGVWS 551 (560)
Q Consensus 497 LLVLDLDETLVH----SSskpp-~g~kPDfkV--~~yyVyKRPhLDEFLdfVsE~-FEVVVWT 551 (560)
++|||+|||||+ ++..|| ..+.++.+. .+..|..|||+.+||+|+... |-|..+|
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~s 64 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLAS 64 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEee
Confidence 689999999997 344443 224566555 678999999999999999866 6554443
No 14
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=96.61 E-value=0.0021 Score=65.66 Aligned_cols=51 Identities=27% Similarity=0.335 Sum_probs=42.9
Q ss_pred CCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeC-ccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 493 SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKR-PCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKR-PhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
..++++|+||||||+.... .|..| |++.++|+++.+. +-++|||++.+.++
T Consensus 126 ~~~~~i~~D~D~TL~~~~~---------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v 178 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEE---------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHV 178 (303)
T ss_pred eeccEEEEecCCCccCCCC---------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHH
Confidence 3579999999999998621 26688 9999999999987 89999999877655
No 15
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.33 E-value=0.0038 Score=52.50 Aligned_cols=50 Identities=32% Similarity=0.365 Sum_probs=37.0
Q ss_pred eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646 496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS 554 (560)
Q Consensus 496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~ 554 (560)
|+|+||+||||++.. ... .+ .......|++.++|+++.+. |.++|-|.+.
T Consensus 1 k~~~~D~dgtL~~~~--~~~--~~-----~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDV--PYV--DD-----EDERILYPEVPDALAELKEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCC--CCC--CC-----HHHheeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence 689999999999741 110 11 11356789999999999766 9999999876
No 16
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.07 E-value=0.011 Score=55.10 Aligned_cols=64 Identities=16% Similarity=0.126 Sum_probs=44.5
Q ss_pred CeEEEEecCcccccccCCCCCC-----CCCCe-ee---ccceeEeCccHHHHHHHHHhc-cEEEEEccc-ccccc
Q 042646 495 KKLLVLDLNGLLVDIVASPYHR-----YRPDK-MV---SNKAVFKRPCCDEFLSFCFER-FNVGVWSRG-SRKIW 558 (560)
Q Consensus 495 KKLLVLDLDETLVHSSskpp~g-----~kPDf-kV---~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS-~~kYV 558 (560)
.+|+|+|||+|||.-......+ ..++. .+ ..-.+..+|++.++|+++.+. +.++|-|++ ..+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~ 76 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWA 76 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHH
Confidence 4799999999999754322110 12222 11 334678889999999999865 999999987 66554
No 17
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.97 E-value=0.011 Score=51.56 Aligned_cols=52 Identities=25% Similarity=0.178 Sum_probs=38.6
Q ss_pred eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646 496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS 554 (560)
Q Consensus 496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~ 554 (560)
++|+||+||||+........ . ..-.+...|++.++|+++.+. |.++|-|+..
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~---~----~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYP---R----SLDDWQLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcccC---C----CHHHeEEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 57999999999986532211 1 111235689999999999866 9999999875
No 18
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.59 E-value=0.024 Score=51.55 Aligned_cols=52 Identities=21% Similarity=0.325 Sum_probs=35.0
Q ss_pred eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcc
Q 042646 496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSR 552 (560)
Q Consensus 496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTS 552 (560)
|++.|||||||+.......-...++- +++.-|.+-+-|+.+.+. |.|||+|-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D-----~~~~~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDD-----WKFFPPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCG-----GEEC-TTHHHHHHHHHHTTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHH-----hhhcchhHHHHHHHHHhcCCeEEEEeC
Confidence 68899999999986442211112222 467778899999999875 99999984
No 19
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.10 E-value=0.037 Score=49.50 Aligned_cols=52 Identities=21% Similarity=0.206 Sum_probs=38.7
Q ss_pred CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646 495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS 554 (560)
Q Consensus 495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~ 554 (560)
.|+|+||+||||+-... .... .. -.+...|++.++|+++.+. |.++|-|+..
T Consensus 3 ~~~~~~d~~~t~~~~~~-~~~~-~~------~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSD-GYVK-SP------DEWIPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCc-cccC-CH------HHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 68999999999976531 1110 01 1355789999999999987 9999999775
No 20
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=95.06 E-value=0.035 Score=49.93 Aligned_cols=51 Identities=22% Similarity=0.148 Sum_probs=34.7
Q ss_pred eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHH-hccEEEEEccccccc
Q 042646 496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCF-ERFNVGVWSRGSRKI 557 (560)
Q Consensus 496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVs-E~FEVVVWTSS~~kY 557 (560)
|++++||||||+.....+.. ..-..+.+.+.|+.+. +.+.|+++|+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~-----------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYA-----------NVAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred CEEEEeCCCCcccCCCCccc-----------ccccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 68999999999764211110 0225567777787774 459999999987654
No 21
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.84 E-value=0.061 Score=48.96 Aligned_cols=56 Identities=16% Similarity=0.231 Sum_probs=38.3
Q ss_pred CCeEEEEecCcccccccCC-CCCCCCCCeeeccceeEeCccHHHHHHHHHh-ccEEEEEccccc
Q 042646 494 KKKLLVLDLNGLLVDIVAS-PYHRYRPDKMVSNKAVFKRPCCDEFLSFCFE-RFNVGVWSRGSR 555 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSsk-pp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE-~FEVVVWTSS~~ 555 (560)
..|+++||+||||+..... +.. ..|+- ....-|++.++|+++.+ .|.++|-|+...
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~-~~~~~-----~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFP-TSASD-----WRFLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCccc-CChHH-----eEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5789999999999975321 111 11211 12245999999999975 599999998543
No 22
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=94.74 E-value=0.03 Score=52.51 Aligned_cols=64 Identities=27% Similarity=0.205 Sum_probs=34.3
Q ss_pred CCeEEEEecCcccccccCC----CC-CCCCCC-eee--ccceeEeCccHHHHHHHHHhc-cEEEEEccc-cccc
Q 042646 494 KKKLLVLDLNGLLVDIVAS----PY-HRYRPD-KMV--SNKAVFKRPCCDEFLSFCFER-FNVGVWSRG-SRKI 557 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSsk----pp-~g~kPD-fkV--~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS-~~kY 557 (560)
-.||+|||||+|||..... +| .....+ ..+ .+..|...|.+...|+++.++ ..++|=|.+ .+++
T Consensus 2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~ 75 (169)
T PF12689_consen 2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDW 75 (169)
T ss_dssp S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHH
T ss_pred CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHH
Confidence 3689999999999975422 11 111122 222 667899999999999999975 788887743 3444
No 23
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.65 E-value=0.034 Score=54.75 Aligned_cols=58 Identities=21% Similarity=0.123 Sum_probs=39.7
Q ss_pred CCeEEEEecCcccccccCCCCCCCCCCeeecccee-EeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAV-FKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyV-yKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
.+|+||||||+|||..+-..- .. .++.+ -..|++.+||+.+.+. +.++|-|...+..|
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~------g~-~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a 61 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGED------GI-DNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDA 61 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccC------Cc-cccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHH
Confidence 589999999999997642211 00 01111 1367899999999866 88888888776544
No 24
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.52 E-value=0.038 Score=54.92 Aligned_cols=65 Identities=22% Similarity=0.250 Sum_probs=43.3
Q ss_pred CCCeEEEEecCcccccccCC------CCCCCCCCe---eeccceeEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646 493 SKKKLLVLDLNGLLVDIVAS------PYHRYRPDK---MVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKI 557 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSSsk------pp~g~kPDf---kV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY 557 (560)
.+++.+|||||||+++.+.. ....+.+.. -+.......-|++.+||+++.++ ..|+|.|.....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~ 147 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKE 147 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 36889999999999986521 111111110 01222445679999999999776 8899999977544
No 25
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=94.42 E-value=0.059 Score=52.54 Aligned_cols=61 Identities=8% Similarity=0.105 Sum_probs=38.9
Q ss_pred CCeEEEEecCcccccccCCCCCC---CCCC---e----eecc-----ceeEeCcc--HHHHHHHHHhc-cEEEEEcccc
Q 042646 494 KKKLLVLDLNGLLVDIVASPYHR---YRPD---K----MVSN-----KAVFKRPC--CDEFLSFCFER-FNVGVWSRGS 554 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSskpp~g---~kPD---f----kV~~-----yyVyKRPh--LDEFLdfVsE~-FEVVVWTSS~ 554 (560)
++..++|||||||++++..-..+ +.+. + .+.. ..-...|+ ..+||+++.++ +.++|-|++.
T Consensus 62 ~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~ 140 (237)
T TIGR01672 62 PPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRT 140 (237)
T ss_pred CCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCC
Confidence 44599999999999987510011 1111 0 1111 11233555 99999999887 8999999873
No 26
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=93.65 E-value=0.016 Score=51.55 Aligned_cols=33 Identities=27% Similarity=0.249 Sum_probs=27.3
Q ss_pred eeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646 527 AVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT 559 (560)
Q Consensus 527 yVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd 559 (560)
.+..+|++.+||+++.+.+.++|-|++...+++
T Consensus 66 ~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~ 98 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAG 98 (205)
T ss_pred hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHH
Confidence 344579999999999988999999998876653
No 27
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.49 E-value=0.14 Score=52.93 Aligned_cols=54 Identities=15% Similarity=0.157 Sum_probs=41.4
Q ss_pred CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646 494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRG 553 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS 553 (560)
++|+|+||-||||+......+... ....+..+|++.+||+++.+. |.++|-|..
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~------~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVD------SLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcccccc------CcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 479999999999999753222111 122578899999999999875 999999983
No 28
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.19 E-value=0.16 Score=46.31 Aligned_cols=53 Identities=13% Similarity=0.092 Sum_probs=38.7
Q ss_pred CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646 495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRG 553 (560)
Q Consensus 495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS 553 (560)
.|.|.||.||||++..........+ -.+..-|++.++|+++.+. |.++|.|+.
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~------~~~~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDAL------EKLRFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCH------HHeeECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 3689999999999953211110011 1466789999999999986 999999985
No 29
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=92.94 E-value=0.15 Score=55.22 Aligned_cols=57 Identities=18% Similarity=0.261 Sum_probs=40.8
Q ss_pred CCCeEEEEecCcccccccCC-CCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646 493 SKKKLLVLDLNGLLVDIVAS-PYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSR 555 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSSsk-pp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~ 555 (560)
+..|++.||+||||+...+. ... ..++. +.+.-|++.+.|+.+.+. |.|+|+|.-..
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~-~~~~d-----~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFP-KGPDD-----WQIIFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCC-CCHHH-----eeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 46899999999999975322 111 11211 234569999999999876 99999998544
No 30
>PLN02954 phosphoserine phosphatase
Probab=91.90 E-value=0.091 Score=47.58 Aligned_cols=32 Identities=22% Similarity=0.125 Sum_probs=26.6
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEccccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIWT 559 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYVd 559 (560)
...+|++.+||+++.+. +.++|-|++...++.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~ 115 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIA 115 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHH
Confidence 44679999999999876 899999999877653
No 31
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=91.86 E-value=0.32 Score=47.68 Aligned_cols=61 Identities=8% Similarity=0.141 Sum_probs=38.5
Q ss_pred CCeEEEEecCcccccccCCCC---CCCCCC---e----ee-----ccceeEeCcc--HHHHHHHHHhc-cEEEEEcccc
Q 042646 494 KKKLLVLDLNGLLVDIVASPY---HRYRPD---K----MV-----SNKAVFKRPC--CDEFLSFCFER-FNVGVWSRGS 554 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSskpp---~g~kPD---f----kV-----~~yyVyKRPh--LDEFLdfVsE~-FEVVVWTSS~ 554 (560)
++.-++||+|||+++++.... ..+.++ + .+ .....+-+|| +.+||+++.++ +.|++-|+..
T Consensus 62 ~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~ 140 (237)
T PRK11009 62 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRT 140 (237)
T ss_pred CCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 455999999999999753211 112221 1 11 1112345566 99999999655 8999999864
No 32
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=91.74 E-value=0.23 Score=51.26 Aligned_cols=52 Identities=21% Similarity=0.275 Sum_probs=40.3
Q ss_pred CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhcc-EEEEEccccccccc
Q 042646 494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERF-NVGVWSRGSRKIWT 559 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~F-EVVVWTSS~~kYVd 559 (560)
.+..+|+|||.|||...... -..=|.+-+.|..+.+.+ -+++||.+.+++|.
T Consensus 121 ~phVIVfDlD~TLItd~~~v--------------~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~ 173 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDV--------------RIRDPAVYDSLRELKEQGCVLVLWSYGNREHVR 173 (297)
T ss_pred CCcEEEEECCCcccccCCcc--------------ccCChHHHHHHHHHHHcCCEEEEecCCCHHHHH
Confidence 56699999999999764321 113378888999999887 78899999988763
No 33
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=90.67 E-value=0.34 Score=44.00 Aligned_cols=51 Identities=6% Similarity=0.165 Sum_probs=29.4
Q ss_pred EEEEecCcccccccCC-CCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646 497 LLVLDLNGLLVDIVAS-PYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS 554 (560)
Q Consensus 497 LLVLDLDETLVHSSsk-pp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~ 554 (560)
++|+|+||||+.+... ..... ++.- +..|+..++++.+.+. |.|++.|++.
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~-----~~~~--~~~~~~~~a~~~l~~~G~~ivy~TGRp 53 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPI-----IGKD--WTHPGVAKLYRDIQNNGYKILYLTARP 53 (157)
T ss_pred CEEEecCCCCcccccccccccc-----cccC--cCCHHHHHHHHHHHHcCCeEEEEcCCc
Confidence 4799999999976421 10000 0000 2357777777777665 6666666654
No 34
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=90.60 E-value=0.41 Score=45.63 Aligned_cols=60 Identities=15% Similarity=0.092 Sum_probs=43.0
Q ss_pred CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+++++++|+||||+......+- .+. ........|++.+||+.+.+. +.++|.|+......
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~--~~~---~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~ 217 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPY--DWT---KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCE 217 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCcc--chh---hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhH
Confidence 4689999999999986543211 111 111235689999999999877 89999999877654
No 35
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=90.32 E-value=0.32 Score=43.30 Aligned_cols=56 Identities=23% Similarity=0.292 Sum_probs=34.8
Q ss_pred eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
|+++||+||||+.-.-. +.++...- .+++.+|+. -|+++.+. +.++|-|+.....+
T Consensus 2 ~~~~~D~Dgtl~~~~~~----~~~~~~~~-~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~ 58 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIY----YTNNGEEI-KAFNVRDGY--GIRCALKSGIEVAIITGRKAKLV 58 (154)
T ss_pred eEEEEeCceeEEcCeEE----ECCCCcEE-EEEechhHH--HHHHHHHCCCEEEEEECCCCHHH
Confidence 68999999999962110 11121111 134666665 57777764 89999998876543
No 36
>PRK06769 hypothetical protein; Validated
Probab=89.93 E-value=0.54 Score=42.65 Aligned_cols=50 Identities=8% Similarity=0.028 Sum_probs=35.6
Q ss_pred CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646 495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS 554 (560)
Q Consensus 495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~ 554 (560)
=+.|+||+||||.--. . ....-.+-..|++.++|+++.+. |.++|-|+..
T Consensus 4 ~~~~~~d~d~~~~~~~---------~-~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~ 54 (173)
T PRK06769 4 IQAIFIDRDGTIGGDT---------T-IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQP 54 (173)
T ss_pred CcEEEEeCCCcccCCC---------C-CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCc
Confidence 4689999999994110 0 11111344679999999999876 8999999865
No 37
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=89.85 E-value=0.46 Score=42.99 Aligned_cols=46 Identities=17% Similarity=0.028 Sum_probs=37.2
Q ss_pred CCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646 493 SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS 554 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~ 554 (560)
.+-+++|+|+||||++... ....|++.++|+++.+. +.++|.|...
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------------NEAYPALRDWIEELKAAGRKLLIVSNNA 69 (170)
T ss_pred CCCCEEEEecCCccccCCC----------------CCcChhHHHHHHHHHHcCCEEEEEeCCc
Confidence 4678999999999987521 12458899999999877 8999999876
No 38
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=89.52 E-value=0.6 Score=45.38 Aligned_cols=18 Identities=28% Similarity=0.447 Sum_probs=15.0
Q ss_pred CCeEEEEecCcccccccC
Q 042646 494 KKKLLVLDLNGLLVDIVA 511 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSs 511 (560)
.+.+|+|||||||+....
T Consensus 13 ~~~li~~D~DGTLl~~~~ 30 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKP 30 (266)
T ss_pred CCEEEEEecCCCCCCCCC
Confidence 368999999999998643
No 39
>PHA02597 30.2 hypothetical protein; Provisional
Probab=89.19 E-value=0.19 Score=44.88 Aligned_cols=26 Identities=4% Similarity=-0.136 Sum_probs=20.8
Q ss_pred eEeCccHHHHHHHHHhccEEEEEccc
Q 042646 528 VFKRPCCDEFLSFCFERFNVGVWSRG 553 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~FEVVVWTSS 553 (560)
+...|++.++|+++.+.+.+++-|+.
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~ 98 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTAL 98 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCC
Confidence 55799999999999988876665554
No 40
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=89.12 E-value=0.5 Score=47.49 Aligned_cols=55 Identities=27% Similarity=0.242 Sum_probs=39.1
Q ss_pred CCCCCCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccE--EEEEcccc
Q 042646 488 VCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFN--VGVWSRGS 554 (560)
Q Consensus 488 ~~i~~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FE--VVVWTSS~ 554 (560)
......++.+++||.||||.+....|. -++.=+.+.+-|..+...+. |+|.|-..
T Consensus 11 ~~~~~a~~~~~~lDyDGTl~~i~~~p~------------~a~~~~~l~~lL~~Las~~~~~v~iiSGR~ 67 (266)
T COG1877 11 EPYLNARKRLLFLDYDGTLTEIVPHPE------------AAVPDDRLLSLLQDLASDPRNVVAIISGRS 67 (266)
T ss_pred cccccccceEEEEeccccccccccCcc------------ccCCCHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 344456899999999999999865443 23455677888888888877 55555443
No 41
>PLN02645 phosphoglycolate phosphatase
Probab=89.06 E-value=0.55 Score=46.41 Aligned_cols=43 Identities=12% Similarity=0.087 Sum_probs=31.0
Q ss_pred CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646 494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS 554 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~ 554 (560)
.-++++||+||||++... ++ |+..++|+++.+. ..+++-|...
T Consensus 27 ~~~~~~~D~DGtl~~~~~----------------~~--~ga~e~l~~lr~~g~~~~~~TN~~ 70 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDK----------------LI--EGVPETLDMLRSMGKKLVFVTNNS 70 (311)
T ss_pred hCCEEEEeCcCCeEeCCc----------------cC--cCHHHHHHHHHHCCCEEEEEeCCC
Confidence 467999999999998631 12 6777788777654 7777777655
No 42
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=88.82 E-value=0.21 Score=43.83 Aligned_cols=27 Identities=19% Similarity=0.058 Sum_probs=19.3
Q ss_pred CccHHHHHHHHHhccEEEEEcccccccc
Q 042646 531 RPCCDEFLSFCFERFNVGVWSRGSRKIW 558 (560)
Q Consensus 531 RPhLDEFLdfVsE~FEVVVWTSS~~kYV 558 (560)
-|+ .++|.++.+.+.++|-|++...++
T Consensus 90 ~~~-~e~L~~L~~~~~l~I~T~~~~~~~ 116 (188)
T PRK10725 90 LPL-IEVVKAWHGRRPMAVGTGSESAIA 116 (188)
T ss_pred ccH-HHHHHHHHhCCCEEEEcCCchHHH
Confidence 354 367777777788888888876654
No 43
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=88.79 E-value=0.87 Score=38.64 Aligned_cols=40 Identities=28% Similarity=0.222 Sum_probs=31.1
Q ss_pred EEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646 498 LVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSR 555 (560)
Q Consensus 498 LVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~ 555 (560)
++|||||||++.. ..=|+..+||+++.+. ..+++.|-+..
T Consensus 1 ~l~D~dGvl~~g~------------------~~ipga~e~l~~L~~~g~~~~~lTNns~ 41 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------------EPIPGAVEALDALRERGKPVVFLTNNSS 41 (101)
T ss_dssp EEEESTTTSEETT------------------EE-TTHHHHHHHHHHTTSEEEEEES-SS
T ss_pred CEEeCccEeEeCC------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCC
Confidence 5899999999852 1348899999999886 88888887653
No 44
>PRK11587 putative phosphatase; Provisional
Probab=87.60 E-value=0.29 Score=44.83 Aligned_cols=30 Identities=13% Similarity=0.123 Sum_probs=25.0
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI 557 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY 557 (560)
+...|++.+||+++.+. +.++|-|++...+
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~ 112 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPV 112 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchH
Confidence 45689999999999865 9999999987654
No 45
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=87.15 E-value=0.29 Score=42.53 Aligned_cols=26 Identities=23% Similarity=0.236 Sum_probs=22.2
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRG 553 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS 553 (560)
+...|++.+||+++.+. |.++|-|++
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~ 113 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS 113 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc
Confidence 56789999999999876 888888876
No 46
>PLN02151 trehalose-phosphatase
Probab=87.05 E-value=0.64 Score=48.54 Aligned_cols=51 Identities=24% Similarity=0.305 Sum_probs=34.4
Q ss_pred CCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccEEEEEcccc
Q 042646 492 HSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGS 554 (560)
Q Consensus 492 ~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~ 554 (560)
..++.+|+||+||||+-.... |+ .++.-|.+.+-|+.+...|.|+|-|-..
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~------P~------~A~~~~~~~~aL~~La~~~~vaIvSGR~ 145 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDD------PD------RAFMSKKMRNTVRKLAKCFPTAIVSGRC 145 (354)
T ss_pred cCCceEEEEecCccCCCCCCC------cc------cccCCHHHHHHHHHHhcCCCEEEEECCC
Confidence 346789999999999966532 22 2345566777777777667666666544
No 47
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=86.92 E-value=0.33 Score=43.91 Aligned_cols=31 Identities=13% Similarity=0.004 Sum_probs=25.7
Q ss_pred eEeCccHHHHHHHHHh-ccEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFE-RFNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE-~FEVVVWTSS~~kYV 558 (560)
+...|++.+||+++.+ .|.++|-|++...++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~ 117 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTA 117 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHH
Confidence 3577999999999975 599999999887654
No 48
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=86.24 E-value=0.4 Score=43.47 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=25.8
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+...|++.+||+++.+. +.++|-|++...++
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~ 112 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTV 112 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence 45679999999999865 89999999877654
No 49
>PLN02580 trehalose-phosphatase
Probab=86.14 E-value=0.75 Score=48.48 Aligned_cols=52 Identities=29% Similarity=0.347 Sum_probs=39.2
Q ss_pred CCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccEEEEEccccc
Q 042646 492 HSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSR 555 (560)
Q Consensus 492 ~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~ 555 (560)
..++.+|+||.||||+-.... |+ .++.=|.+.+-|+.+.++|-|+|-|-...
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~------Pd------~A~~s~~~~~aL~~La~~~~VAIVSGR~~ 167 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDD------PD------RALMSDAMRSAVKNVAKYFPTAIISGRSR 167 (384)
T ss_pred hcCCeEEEEecCCccCCCCCC------cc------cccCCHHHHHHHHHHhhCCCEEEEeCCCH
Confidence 347889999999999876532 33 35566788888888888888888876654
No 50
>PTZ00174 phosphomannomutase; Provisional
Probab=85.74 E-value=0.46 Score=45.07 Aligned_cols=18 Identities=33% Similarity=0.569 Sum_probs=15.3
Q ss_pred CCeEEEEecCcccccccC
Q 042646 494 KKKLLVLDLNGLLVDIVA 511 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSs 511 (560)
..||+++||||||++...
T Consensus 4 ~~klia~DlDGTLL~~~~ 21 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRN 21 (247)
T ss_pred CCeEEEEECcCCCcCCCC
Confidence 468999999999998643
No 51
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=85.61 E-value=0.37 Score=43.37 Aligned_cols=26 Identities=15% Similarity=-0.041 Sum_probs=21.1
Q ss_pred cHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 533 CCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 533 hLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+..++|+++.+. +.++|-|++...++
T Consensus 110 ~~~~~L~~l~~~g~~~~i~T~~~~~~~ 136 (197)
T TIGR01548 110 TPKGLLRELHRAPKGMAVVTGRPRKDA 136 (197)
T ss_pred CHHHHHHHHHHcCCcEEEECCCCHHHH
Confidence 458999999865 99999999877655
No 52
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=85.55 E-value=0.44 Score=42.83 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=25.7
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI 557 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY 557 (560)
+...|++.+||+++.++ +.++|.|++...+
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~ 123 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVK 123 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHH
Confidence 46789999999999887 9999999987654
No 53
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=85.26 E-value=0.43 Score=42.65 Aligned_cols=27 Identities=26% Similarity=0.103 Sum_probs=22.4
Q ss_pred EeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646 529 FKRPCCDEFLSFCFER-FNVGVWSRGSR 555 (560)
Q Consensus 529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~ 555 (560)
...|++.++|+++.+. |.++|-|++..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~ 132 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS 132 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch
Confidence 3569999999999876 89999998654
No 54
>PRK11590 hypothetical protein; Provisional
Probab=85.21 E-value=0.48 Score=43.83 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=25.2
Q ss_pred eEeCccHHHHH-HHHH-hccEEEEEccccccccc
Q 042646 528 VFKRPCCDEFL-SFCF-ERFNVGVWSRGSRKIWT 559 (560)
Q Consensus 528 VyKRPhLDEFL-dfVs-E~FEVVVWTSS~~kYVd 559 (560)
+..+|++.+.| +.+. +.+.|+|=|++...++.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~ 127 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVE 127 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHH
Confidence 34589999999 4566 46999999999887653
No 55
>PRK10976 putative hydrolase; Provisional
Probab=84.77 E-value=0.49 Score=44.27 Aligned_cols=16 Identities=25% Similarity=0.376 Sum_probs=13.9
Q ss_pred CeEEEEecCccccccc
Q 042646 495 KKLLVLDLNGLLVDIV 510 (560)
Q Consensus 495 KKLLVLDLDETLVHSS 510 (560)
.||+++||||||++..
T Consensus 2 ikli~~DlDGTLl~~~ 17 (266)
T PRK10976 2 YQVVASDLDGTLLSPD 17 (266)
T ss_pred ceEEEEeCCCCCcCCC
Confidence 4899999999999753
No 56
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=84.56 E-value=0.45 Score=44.27 Aligned_cols=31 Identities=6% Similarity=-0.169 Sum_probs=25.3
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+...|++.++|+++.+. +.++|-|++...++
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~ 125 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLA 125 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 56789999999999876 88889998765543
No 57
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=84.47 E-value=0.53 Score=42.75 Aligned_cols=16 Identities=25% Similarity=0.482 Sum_probs=13.7
Q ss_pred CeEEEEecCccccccc
Q 042646 495 KKLLVLDLNGLLVDIV 510 (560)
Q Consensus 495 KKLLVLDLDETLVHSS 510 (560)
.|++++||||||+...
T Consensus 3 ~kli~~DlDGTLl~~~ 18 (230)
T PRK01158 3 IKAIAIDIDGTITDKD 18 (230)
T ss_pred eeEEEEecCCCcCCCC
Confidence 4899999999999753
No 58
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=84.46 E-value=0.54 Score=43.63 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.9
Q ss_pred CeEEEEecCccccccc
Q 042646 495 KKLLVLDLNGLLVDIV 510 (560)
Q Consensus 495 KKLLVLDLDETLVHSS 510 (560)
.||+++||||||++..
T Consensus 3 ~kli~~DlDGTLl~~~ 18 (272)
T PRK10530 3 YRVIALDLDGTLLTPK 18 (272)
T ss_pred ccEEEEeCCCceECCC
Confidence 5899999999999753
No 59
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=84.20 E-value=0.54 Score=41.65 Aligned_cols=27 Identities=15% Similarity=0.017 Sum_probs=21.6
Q ss_pred eCccHHHHHHHHHhccEEEEEcccccccc
Q 042646 530 KRPCCDEFLSFCFERFNVGVWSRGSRKIW 558 (560)
Q Consensus 530 KRPhLDEFLdfVsE~FEVVVWTSS~~kYV 558 (560)
..|++.++|+.+. +.++|.|++...++
T Consensus 85 ~~~g~~~~L~~L~--~~~~i~Tn~~~~~~ 111 (184)
T TIGR01993 85 PDPELRNLLLRLP--GRKIIFTNGDRAHA 111 (184)
T ss_pred CCHHHHHHHHhCC--CCEEEEeCCCHHHH
Confidence 4688999999986 68899998876544
No 60
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=84.07 E-value=0.52 Score=44.72 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=24.9
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+...|++.++|+++.+. |.++|-|++...++
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~ 131 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMM 131 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHH
Confidence 34579999999999865 99999998876543
No 61
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=83.98 E-value=0.7 Score=44.08 Aligned_cols=18 Identities=33% Similarity=0.492 Sum_probs=15.6
Q ss_pred CCCeEEEEecCccccccc
Q 042646 493 SKKKLLVLDLNGLLVDIV 510 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSS 510 (560)
+..+++++||||||++..
T Consensus 5 ~~~~lI~~DlDGTLL~~~ 22 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSH 22 (271)
T ss_pred CCCeEEEEeCccCCcCCC
Confidence 468999999999999853
No 62
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=83.96 E-value=0.61 Score=45.15 Aligned_cols=30 Identities=7% Similarity=0.127 Sum_probs=24.7
Q ss_pred EeCccHHHHHHHHHh-ccEEEEEcccccccc
Q 042646 529 FKRPCCDEFLSFCFE-RFNVGVWSRGSRKIW 558 (560)
Q Consensus 529 yKRPhLDEFLdfVsE-~FEVVVWTSS~~kYV 558 (560)
-.+|++.++|+++.+ .+.++|.|++...++
T Consensus 101 ~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~ 131 (272)
T PRK13223 101 VVYPGVRDTLKWLKKQGVEMALITNKPERFV 131 (272)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEECCcHHHH
Confidence 468999999999986 499999998876543
No 63
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=83.85 E-value=0.52 Score=44.62 Aligned_cols=31 Identities=6% Similarity=-0.033 Sum_probs=25.8
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+...|++.++|+++.+. |.++|-|++...++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~ 138 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENA 138 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHH
Confidence 44679999999999765 99999999887665
No 64
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=83.62 E-value=0.58 Score=43.69 Aligned_cols=31 Identities=16% Similarity=0.218 Sum_probs=25.2
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+...|++.+||+++.+. +.++|-|++...++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~ 129 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMM 129 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHH
Confidence 35679999999999876 89999998876554
No 65
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=83.32 E-value=0.56 Score=44.03 Aligned_cols=26 Identities=8% Similarity=0.104 Sum_probs=21.9
Q ss_pred eCccHHHHHHHHHhccEEEEEccccc
Q 042646 530 KRPCCDEFLSFCFERFNVGVWSRGSR 555 (560)
Q Consensus 530 KRPhLDEFLdfVsE~FEVVVWTSS~~ 555 (560)
.-|++.++|+.+.+.|.++|-|++..
T Consensus 114 ~~~gv~~~L~~L~~~~~l~i~Tn~~~ 139 (238)
T PRK10748 114 VPQATHDTLKQLAKKWPLVAITNGNA 139 (238)
T ss_pred CCccHHHHHHHHHcCCCEEEEECCCc
Confidence 33889999999998899999998653
No 66
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=83.26 E-value=0.61 Score=43.59 Aligned_cols=16 Identities=31% Similarity=0.461 Sum_probs=14.0
Q ss_pred CeEEEEecCccccccc
Q 042646 495 KKLLVLDLNGLLVDIV 510 (560)
Q Consensus 495 KKLLVLDLDETLVHSS 510 (560)
.|++++||||||++..
T Consensus 3 ~kli~~DlDGTLl~~~ 18 (270)
T PRK10513 3 IKLIAIDMDGTLLLPD 18 (270)
T ss_pred eEEEEEecCCcCcCCC
Confidence 5899999999999753
No 67
>PLN03017 trehalose-phosphatase
Probab=83.08 E-value=1.3 Score=46.59 Aligned_cols=19 Identities=37% Similarity=0.600 Sum_probs=15.4
Q ss_pred CCCCeEEEEecCccccccc
Q 042646 492 HSKKKLLVLDLNGLLVDIV 510 (560)
Q Consensus 492 ~~KKKLLVLDLDETLVHSS 510 (560)
..++.+|+||+||||+-..
T Consensus 108 ~~k~~llflD~DGTL~Piv 126 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPIV 126 (366)
T ss_pred cCCCeEEEEecCCcCcCCc
Confidence 3478899999999999544
No 68
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=82.71 E-value=0.64 Score=43.87 Aligned_cols=16 Identities=25% Similarity=0.407 Sum_probs=13.7
Q ss_pred CeEEEEecCccccccc
Q 042646 495 KKLLVLDLNGLLVDIV 510 (560)
Q Consensus 495 KKLLVLDLDETLVHSS 510 (560)
.||+++||||||+...
T Consensus 2 ~kli~~DlDGTLl~~~ 17 (272)
T PRK15126 2 ARLAAFDMDGTLLMPD 17 (272)
T ss_pred ccEEEEeCCCcCcCCC
Confidence 4799999999999753
No 69
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=82.40 E-value=0.56 Score=45.62 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=26.3
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+-.+|++.+||+++.++ |.++|-|++...++
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~ 139 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYL 139 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHH
Confidence 33579999999999876 99999999987665
No 70
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=82.24 E-value=0.65 Score=41.47 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=26.3
Q ss_pred eEeCccHHHHHHHHHhccEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kYV 558 (560)
+..+|++.++|+++.+.|.++|-|++...++
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~ 126 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQ 126 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHH
Confidence 5678999999999998899999998876553
No 71
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=82.05 E-value=0.68 Score=41.55 Aligned_cols=31 Identities=13% Similarity=0.032 Sum_probs=26.2
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
...+|++.+||+++.+. +.++|.|.+...++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~ 123 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFV 123 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence 55889999999999865 89999998876654
No 72
>PRK09449 dUMP phosphatase; Provisional
Probab=81.88 E-value=0.68 Score=42.01 Aligned_cols=30 Identities=17% Similarity=0.262 Sum_probs=25.3
Q ss_pred eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646 528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI 557 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY 557 (560)
+...|++.++|+++.+.|.++|-|++...+
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~ 123 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTEL 123 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHH
Confidence 346799999999999889999999886654
No 73
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=81.87 E-value=1.5 Score=45.03 Aligned_cols=61 Identities=26% Similarity=0.309 Sum_probs=37.6
Q ss_pred CCCeEEEEecCcccccccCCC------CCCCCCCe---eeccceeEeCccHHHHHHHHHhccEEEEEccc
Q 042646 493 SKKKLLVLDLNGLLVDIVASP------YHRYRPDK---MVSNKAVFKRPCCDEFLSFCFERFNVGVWSRG 553 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSSskp------p~g~kPDf---kV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS 553 (560)
.+++-+|||||||+++-+.-. ..++.|.. -+....--.=|+.-+||.|+-++=-.|.|-|-
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSN 146 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISN 146 (274)
T ss_pred CCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEec
Confidence 367799999999999965321 11233311 11111223459999999999988655555443
No 74
>PRK08238 hypothetical protein; Validated
Probab=81.63 E-value=1.6 Score=46.68 Aligned_cols=31 Identities=3% Similarity=-0.128 Sum_probs=26.4
Q ss_pred EeCccHHHHHHHHHhc-cEEEEEccccccccc
Q 042646 529 FKRPCCDEFLSFCFER-FNVGVWSRGSRKIWT 559 (560)
Q Consensus 529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~kYVd 559 (560)
-.+|++.++|+.+.+. +.++|=|++.+.+++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~ 103 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQ 103 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHH
Confidence 3679999999999766 899999999888764
No 75
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=81.54 E-value=0.64 Score=40.43 Aligned_cols=25 Identities=12% Similarity=0.026 Sum_probs=20.4
Q ss_pred EeCccHHHHHHHHHhc-cEEEEEccc
Q 042646 529 FKRPCCDEFLSFCFER-FNVGVWSRG 553 (560)
Q Consensus 529 yKRPhLDEFLdfVsE~-FEVVVWTSS 553 (560)
...|++.+||+++.+. +.++|-|++
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~ 112 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASAS 112 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCC
Confidence 4579999999999866 888887754
No 76
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=81.45 E-value=1.5 Score=48.21 Aligned_cols=51 Identities=24% Similarity=0.331 Sum_probs=30.2
Q ss_pred CCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHh--ccEEEEEccccc
Q 042646 493 SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFE--RFNVGVWSRGSR 555 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE--~FEVVVWTSS~~ 555 (560)
.+++||+||+||||+.....+.. ...-|.+.+.|+.+.+ ...|+|-|....
T Consensus 490 ~~~rLi~~D~DGTL~~~~~~~~~------------~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~ 542 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPFAPDPEL------------AVPDKELRDLLRRLAADPNTDVAIISGRDR 542 (726)
T ss_pred ccceEEEEecCccccCCCCCccc------------CCCCHHHHHHHHHHHcCCCCeEEEEeCCCH
Confidence 36899999999999975322211 1123445555666555 455666555543
No 77
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=81.39 E-value=0.77 Score=41.90 Aligned_cols=14 Identities=36% Similarity=0.738 Sum_probs=12.6
Q ss_pred eEEEEecCcccccc
Q 042646 496 KLLVLDLNGLLVDI 509 (560)
Q Consensus 496 KLLVLDLDETLVHS 509 (560)
|++++||||||+..
T Consensus 2 k~v~~DlDGTLl~~ 15 (215)
T TIGR01487 2 KLVAIDIDGTLTEP 15 (215)
T ss_pred cEEEEecCCCcCCC
Confidence 69999999999964
No 78
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=81.25 E-value=0.76 Score=41.04 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=25.8
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+...|++.+||+++.++ |.++|-|.+...++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~ 122 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAML 122 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence 44579999999999987 99999998876543
No 79
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=81.04 E-value=0.81 Score=42.58 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=24.9
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
...-|++.+.|.++.+. |.++|-|+.....+
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~ 119 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPEREL 119 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHH
Confidence 35688999999999876 89999998766554
No 80
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=80.88 E-value=0.67 Score=39.53 Aligned_cols=31 Identities=19% Similarity=0.133 Sum_probs=24.8
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
....|++.+||+++.+. +.++|.|++.+..+
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~ 94 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQ 94 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHH
Confidence 34469999999999655 89999999876654
No 81
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=80.75 E-value=0.82 Score=41.79 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=25.0
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+...|++.++|+++.+. |.++|-|++...++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~ 122 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHML 122 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHH
Confidence 34668999999999865 99999999876553
No 82
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=80.70 E-value=0.8 Score=41.59 Aligned_cols=29 Identities=14% Similarity=0.004 Sum_probs=22.8
Q ss_pred eEeCccHHHHHHHHHhccEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kYV 558 (560)
+...|++.+||+.+. +-++|-|++...++
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~ 115 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKM 115 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHH
Confidence 345689999999983 88899998876654
No 83
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=80.65 E-value=2.2 Score=39.13 Aligned_cols=16 Identities=31% Similarity=0.611 Sum_probs=14.5
Q ss_pred CCeEEEEecCcccccc
Q 042646 494 KKKLLVLDLNGLLVDI 509 (560)
Q Consensus 494 KKKLLVLDLDETLVHS 509 (560)
..+++|+|+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 5899999999999975
No 84
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=80.65 E-value=1.1 Score=42.10 Aligned_cols=31 Identities=10% Similarity=-0.115 Sum_probs=26.0
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+...|++.++|+++.+. +-++|-|++...++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~ 123 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNL 123 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHH
Confidence 34679999999999986 89999999877654
No 85
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=80.63 E-value=0.92 Score=39.85 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=26.1
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+..+|++.+||+++.+. +.++|-|++...++
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~ 110 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLA 110 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence 45789999999999865 99999999876554
No 86
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=80.11 E-value=0.66 Score=41.79 Aligned_cols=31 Identities=16% Similarity=-0.043 Sum_probs=25.6
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+...|++.++|+++.+. +.++|.|.+...++
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~ 105 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRA 105 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHH
Confidence 45689999999999765 99999998876654
No 87
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=79.82 E-value=1 Score=42.27 Aligned_cols=19 Identities=42% Similarity=0.590 Sum_probs=15.9
Q ss_pred CCeEEEEecCcccccccCC
Q 042646 494 KKKLLVLDLNGLLVDIVAS 512 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSsk 512 (560)
..|+|++||||||+.....
T Consensus 2 ~~kli~~DlDGTLl~~~~~ 20 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKT 20 (264)
T ss_pred CeeEEEEcCCCCccCCCCc
Confidence 4689999999999987543
No 88
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=79.54 E-value=0.95 Score=50.04 Aligned_cols=19 Identities=47% Similarity=0.454 Sum_probs=16.3
Q ss_pred CCCCeEEEEecCccccccc
Q 042646 492 HSKKKLLVLDLNGLLVDIV 510 (560)
Q Consensus 492 ~~KKKLLVLDLDETLVHSS 510 (560)
.+.+|+||||||+|||-..
T Consensus 219 g~~kK~LVLDLDNTLWGGV 237 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGV 237 (574)
T ss_pred CcccceEEEecCCcccccc
Confidence 4579999999999999754
No 89
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=79.45 E-value=0.9 Score=44.49 Aligned_cols=30 Identities=20% Similarity=0.176 Sum_probs=24.9
Q ss_pred EeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 529 FKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
...|++.+||+++.+. |.++|-|++...++
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~ 174 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAV 174 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence 4689999999999875 99999998876543
No 90
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=78.98 E-value=0.75 Score=41.04 Aligned_cols=31 Identities=10% Similarity=0.087 Sum_probs=26.1
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+-.+|++.+||+++.+. |.++|-|++...++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~ 115 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLA 115 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence 45789999999999866 99999999876654
No 91
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=78.81 E-value=0.91 Score=44.56 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=25.8
Q ss_pred EeCccHHHHHHHHHhc-cEEEEEccccccccc
Q 042646 529 FKRPCCDEFLSFCFER-FNVGVWSRGSRKIWT 559 (560)
Q Consensus 529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~kYVd 559 (560)
...|++.+||+++.++ +.++|-|++...++.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~ 173 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIE 173 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHH
Confidence 4469999999999865 899999998877653
No 92
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=78.65 E-value=1.1 Score=40.33 Aligned_cols=29 Identities=10% Similarity=0.055 Sum_probs=23.9
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRK 556 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~k 556 (560)
+...|++.+||+++.+. |.++|.|++...
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 44689999999999875 999999987543
No 93
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=78.60 E-value=0.99 Score=39.33 Aligned_cols=13 Identities=46% Similarity=0.815 Sum_probs=11.6
Q ss_pred EEEecCccccccc
Q 042646 498 LVLDLNGLLVDIV 510 (560)
Q Consensus 498 LVLDLDETLVHSS 510 (560)
++|||||||+++.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7999999999964
No 94
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=78.54 E-value=1.2 Score=40.27 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=26.7
Q ss_pred eeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
.+..+|++.+||+.+.+. +.++|-|++...++
T Consensus 83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~ 115 (219)
T TIGR00338 83 NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFA 115 (219)
T ss_pred cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHH
Confidence 345789999999999985 99999999876654
No 95
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=78.46 E-value=1.1 Score=42.91 Aligned_cols=15 Identities=47% Similarity=0.671 Sum_probs=13.6
Q ss_pred CeEEEEecCcccccc
Q 042646 495 KKLLVLDLNGLLVDI 509 (560)
Q Consensus 495 KKLLVLDLDETLVHS 509 (560)
.|++++||||||++.
T Consensus 4 ~kli~~DlDGTLl~~ 18 (273)
T PRK00192 4 KLLVFTDLDGTLLDH 18 (273)
T ss_pred ceEEEEcCcccCcCC
Confidence 689999999999974
No 96
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=78.11 E-value=1.9 Score=42.68 Aligned_cols=65 Identities=12% Similarity=0.096 Sum_probs=41.1
Q ss_pred CCCCeEEEEecCcccccccCC----CCCCCCCCee-----eccceeEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646 492 HSKKKLLVLDLNGLLVDIVAS----PYHRYRPDKM-----VSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRK 556 (560)
Q Consensus 492 ~~KKKLLVLDLDETLVHSSsk----pp~g~kPDfk-----V~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~k 556 (560)
..+|..+|||+|||++....- ...+...|.. +..-.--.-|+..+|++.+.++ |.|++.|...+.
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~ 148 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEE 148 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChH
Confidence 458999999999999975410 0000001100 0111223568899999999876 999999987654
No 97
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=77.57 E-value=1.4 Score=38.89 Aligned_cols=15 Identities=27% Similarity=0.465 Sum_probs=12.4
Q ss_pred EEEecCcccccccCC
Q 042646 498 LVLDLNGLLVDIVAS 512 (560)
Q Consensus 498 LVLDLDETLVHSSsk 512 (560)
|++||||||++....
T Consensus 1 i~~DlDGTLl~~~~~ 15 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK 15 (254)
T ss_dssp EEEECCTTTCSTTSS
T ss_pred cEEEECCceecCCCe
Confidence 689999999996544
No 98
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=77.23 E-value=1.2 Score=37.09 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=28.3
Q ss_pred ceeEeCccHHHHHHHHH-hccEEEEEcccccccc
Q 042646 526 KAVFKRPCCDEFLSFCF-ERFNVGVWSRGSRKIW 558 (560)
Q Consensus 526 yyVyKRPhLDEFLdfVs-E~FEVVVWTSS~~kYV 558 (560)
......|++.+||+.+. ..|.++|.|.+.+..+
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~ 107 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERI 107 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHH
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccc
Confidence 47889999999999999 6699999999876543
No 99
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=76.16 E-value=1.3 Score=41.72 Aligned_cols=32 Identities=22% Similarity=0.146 Sum_probs=25.5
Q ss_pred eeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
.+-..|++.+||.++..+ .-++|=|++.+.++
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~ 116 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAA 116 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHH
Confidence 356789999999999987 88888887765443
No 100
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=75.53 E-value=3.6 Score=39.65 Aligned_cols=50 Identities=18% Similarity=0.009 Sum_probs=35.0
Q ss_pred CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcc
Q 042646 495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSR 552 (560)
Q Consensus 495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTS 552 (560)
.|+|+||.||||+-=..... ..++ .....|++-+=|..+.+. |-+||||-
T Consensus 5 ~k~lflDRDGtin~d~~~yv--~~~~------~~~~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYV--DSLD------DFQFIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCccc--CcHH------HhccCccHHHHHHHHHhCCCeEEEEEC
Confidence 78999999999975321100 0111 345778888888888666 99999985
No 101
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=74.96 E-value=1.4 Score=40.16 Aligned_cols=14 Identities=36% Similarity=0.525 Sum_probs=12.2
Q ss_pred EEEEecCccccccc
Q 042646 497 LLVLDLNGLLVDIV 510 (560)
Q Consensus 497 LLVLDLDETLVHSS 510 (560)
++++||||||++..
T Consensus 1 ~i~~DlDGTLL~~~ 14 (221)
T TIGR02463 1 WVFSDLDGTLLDSH 14 (221)
T ss_pred CEEEeCCCCCcCCC
Confidence 58999999999864
No 102
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=74.81 E-value=2 Score=40.71 Aligned_cols=17 Identities=35% Similarity=0.722 Sum_probs=14.8
Q ss_pred CCeEEEEecCccccccc
Q 042646 494 KKKLLVLDLNGLLVDIV 510 (560)
Q Consensus 494 KKKLLVLDLDETLVHSS 510 (560)
++.+|+||+||||+...
T Consensus 2 ~~~~l~lD~DGTL~~~~ 18 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIV 18 (244)
T ss_pred CcEEEEEecCccccCCc
Confidence 67899999999999754
No 103
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=73.77 E-value=1 Score=43.50 Aligned_cols=63 Identities=21% Similarity=0.207 Sum_probs=38.7
Q ss_pred CCCeEEEEecCcccccccCC------CCCCCCC-Cee--e-ccceeEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646 493 SKKKLLVLDLNGLLVDIVAS------PYHRYRP-DKM--V-SNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRK 556 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSSsk------pp~g~kP-Dfk--V-~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~k 556 (560)
.++..+||||||||+..+.. ....+.+ ++. + .... ..=|+..+|++++.++ +.|++-|...+.
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~-~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKA-PAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGG-EEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccC-cccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 57899999999999864321 0000111 100 0 1112 4557788999999988 888777765543
No 104
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=73.52 E-value=1.6 Score=40.85 Aligned_cols=14 Identities=36% Similarity=0.648 Sum_probs=12.2
Q ss_pred EEEEecCccccccc
Q 042646 497 LLVLDLNGLLVDIV 510 (560)
Q Consensus 497 LLVLDLDETLVHSS 510 (560)
|+++||||||++..
T Consensus 1 li~~DlDGTLl~~~ 14 (256)
T TIGR00099 1 LIFIDLDGTLLNDD 14 (256)
T ss_pred CEEEeCCCCCCCCC
Confidence 58999999999864
No 105
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=73.18 E-value=2.1 Score=37.14 Aligned_cols=31 Identities=26% Similarity=0.280 Sum_probs=26.0
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+-.+|++.++|+++.+. +.++|-|++...++
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~ 102 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFI 102 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHH
Confidence 56889999999999875 89999999876654
No 106
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=72.32 E-value=6.1 Score=44.98 Aligned_cols=27 Identities=26% Similarity=0.399 Sum_probs=20.5
Q ss_pred CCCCCCCCCCCCeEEEEecCccccccc
Q 042646 484 PPGNVCIGHSKKKLLVLDLNGLLVDIV 510 (560)
Q Consensus 484 sP~r~~i~~~KKKLLVLDLDETLVHSS 510 (560)
.+...+-+..++|++++||||||++..
T Consensus 405 ~~~~~~~~~~~~KLIfsDLDGTLLd~d 431 (694)
T PRK14502 405 RPSRLPSSGQFKKIVYTDLDGTLLNPL 431 (694)
T ss_pred hcccCCCcCceeeEEEEECcCCCcCCC
Confidence 334445556689999999999999863
No 107
>PLN02423 phosphomannomutase
Probab=71.58 E-value=2.7 Score=40.41 Aligned_cols=18 Identities=17% Similarity=0.274 Sum_probs=13.6
Q ss_pred CCeEEEEecCcccccccC
Q 042646 494 KKKLLVLDLNGLLVDIVA 511 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSs 511 (560)
.+.++++||||||++...
T Consensus 6 ~~~i~~~D~DGTLl~~~~ 23 (245)
T PLN02423 6 PGVIALFDVDGTLTAPRK 23 (245)
T ss_pred cceEEEEeccCCCcCCCC
Confidence 345666999999998643
No 108
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=71.40 E-value=1.9 Score=38.73 Aligned_cols=14 Identities=50% Similarity=0.762 Sum_probs=12.1
Q ss_pred EEEEecCccccccc
Q 042646 497 LLVLDLNGLLVDIV 510 (560)
Q Consensus 497 LLVLDLDETLVHSS 510 (560)
||++||||||+...
T Consensus 1 li~~D~DgTL~~~~ 14 (204)
T TIGR01484 1 LLFFDLDGTLLDPN 14 (204)
T ss_pred CEEEeCcCCCcCCC
Confidence 68999999999754
No 109
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=70.86 E-value=1.7 Score=45.10 Aligned_cols=32 Identities=16% Similarity=0.154 Sum_probs=26.6
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEccccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIWT 559 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYVd 559 (560)
+..+|++.++|+++.+. +.++|-|++..+++.
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~ 361 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLR 361 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHH
Confidence 34579999999999765 999999999887753
No 110
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=70.46 E-value=4.9 Score=41.20 Aligned_cols=63 Identities=13% Similarity=0.218 Sum_probs=37.9
Q ss_pred CCeEEEEecCcccccccCC----CC--CCCCC---C-eeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646 494 KKKLLVLDLNGLLVDIVAS----PY--HRYRP---D-KMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRK 556 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSsk----pp--~g~kP---D-fkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~k 556 (560)
++..+|||||||++.-... .. ..+.+ + .-+..-.---=|+.-+|++++.++ |.|++.|...+.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 5799999999999953210 00 00110 1 001001112247888999999876 999999987653
No 111
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=70.26 E-value=2.4 Score=39.89 Aligned_cols=14 Identities=57% Similarity=0.762 Sum_probs=12.3
Q ss_pred CeEEEEecCccccc
Q 042646 495 KKLLVLDLNGLLVD 508 (560)
Q Consensus 495 KKLLVLDLDETLVH 508 (560)
+.+++.||||||++
T Consensus 1 ~~li~tDlDGTLl~ 14 (249)
T TIGR01485 1 RLLLVSDLDNTLVD 14 (249)
T ss_pred CeEEEEcCCCcCcC
Confidence 46899999999996
No 112
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=70.00 E-value=3.4 Score=44.08 Aligned_cols=68 Identities=22% Similarity=0.297 Sum_probs=51.9
Q ss_pred CCCCCeEEEEecCcccccccCCC--CCC-----C-------CCCee--eccceeEeCccHHHHHHHHHhccEEEEEcccc
Q 042646 491 GHSKKKLLVLDLNGLLVDIVASP--YHR-----Y-------RPDKM--VSNKAVFKRPCCDEFLSFCFERFNVGVWSRGS 554 (560)
Q Consensus 491 ~~~KKKLLVLDLDETLVHSSskp--p~g-----~-------kPDfk--V~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~ 554 (560)
..+++--||.|+|.|.+|+...+ +.. . .-++. -..+++..||.+..|+..+.+.|++.+.+.+.
T Consensus 22 ~q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~ 101 (390)
T COG5190 22 RQDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGT 101 (390)
T ss_pred hcCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeecc
Confidence 34467789999999999987665 110 0 00111 14579999999999999999999999999999
Q ss_pred cccc
Q 042646 555 RKIW 558 (560)
Q Consensus 555 ~kYV 558 (560)
..|+
T Consensus 102 ~~~~ 105 (390)
T COG5190 102 RAYA 105 (390)
T ss_pred ccch
Confidence 8886
No 113
>PLN02887 hydrolase family protein
Probab=69.88 E-value=5.7 Score=43.89 Aligned_cols=17 Identities=24% Similarity=0.411 Sum_probs=15.1
Q ss_pred CCeEEEEecCccccccc
Q 042646 494 KKKLLVLDLNGLLVDIV 510 (560)
Q Consensus 494 KKKLLVLDLDETLVHSS 510 (560)
+-|++++||||||++..
T Consensus 307 ~iKLIa~DLDGTLLn~d 323 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSK 323 (580)
T ss_pred CccEEEEeCCCCCCCCC
Confidence 67899999999999864
No 114
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=69.56 E-value=2.1 Score=36.86 Aligned_cols=29 Identities=14% Similarity=0.187 Sum_probs=24.7
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRK 556 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~k 556 (560)
+..+|++.+||+++.+. |.++|.|++...
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~ 113 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRD 113 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchH
Confidence 45689999999999875 999999998764
No 115
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=69.29 E-value=2.2 Score=40.46 Aligned_cols=13 Identities=31% Similarity=0.567 Sum_probs=11.5
Q ss_pred EEEEecCcccccc
Q 042646 497 LLVLDLNGLLVDI 509 (560)
Q Consensus 497 LLVLDLDETLVHS 509 (560)
++++||||||++.
T Consensus 1 li~~DlDGTLl~~ 13 (225)
T TIGR02461 1 VIFTDLDGTLLPP 13 (225)
T ss_pred CEEEeCCCCCcCC
Confidence 5799999999984
No 116
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=69.20 E-value=2.1 Score=40.31 Aligned_cols=15 Identities=33% Similarity=0.523 Sum_probs=12.8
Q ss_pred EEEEecCcccccccC
Q 042646 497 LLVLDLNGLLVDIVA 511 (560)
Q Consensus 497 LLVLDLDETLVHSSs 511 (560)
|+++||||||++...
T Consensus 1 li~~DlDGTll~~~~ 15 (256)
T TIGR01486 1 WIFTDLDGTLLDPHG 15 (256)
T ss_pred CEEEcCCCCCcCCCC
Confidence 589999999998654
No 117
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=69.18 E-value=2.6 Score=40.27 Aligned_cols=31 Identities=16% Similarity=0.083 Sum_probs=27.6
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+..+|+..++++++.+. +.|+|-|++-..+|
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv 107 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLV 107 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHH
Confidence 78899999999999988 99999999876554
No 118
>PTZ00445 p36-lilke protein; Provisional
Probab=68.64 E-value=6.4 Score=39.44 Aligned_cols=61 Identities=11% Similarity=0.069 Sum_probs=42.2
Q ss_pred CCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646 493 SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSR 555 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~ 555 (560)
.+=|++++|||-|||...+... ..|+.-...+.-..||.+..|+..+.+. +.|+|=|=|.+
T Consensus 41 ~GIk~Va~D~DnTlI~~HsgG~--~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 41 CGIKVIASDFDLTMITKHSGGY--IDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred cCCeEEEecchhhhhhhhcccc--cCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 3679999999999997544332 2343222334456899999999999864 87777665544
No 119
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=68.31 E-value=2.8 Score=43.50 Aligned_cols=16 Identities=31% Similarity=0.613 Sum_probs=13.8
Q ss_pred CeEEEEecCccccccc
Q 042646 495 KKLLVLDLNGLLVDIV 510 (560)
Q Consensus 495 KKLLVLDLDETLVHSS 510 (560)
+|++++||||||++..
T Consensus 1 ~KLIftDLDGTLLd~~ 16 (302)
T PRK12702 1 MRLVLSSLDGSLLDLE 16 (302)
T ss_pred CcEEEEeCCCCCcCCC
Confidence 4799999999999843
No 120
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=67.79 E-value=2.2 Score=38.56 Aligned_cols=14 Identities=29% Similarity=0.456 Sum_probs=11.5
Q ss_pred EEEecCcccccccC
Q 042646 498 LVLDLNGLLVDIVA 511 (560)
Q Consensus 498 LVLDLDETLVHSSs 511 (560)
+++||||||++...
T Consensus 1 i~~DlDGTLl~~~~ 14 (225)
T TIGR01482 1 IASDIDGTLTDPNR 14 (225)
T ss_pred CeEeccCccCCCCc
Confidence 58999999998643
No 121
>PLN02940 riboflavin kinase
Probab=67.63 E-value=2.6 Score=43.37 Aligned_cols=31 Identities=10% Similarity=0.101 Sum_probs=26.2
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
+...|++.++|+++.+. +.++|-|++...++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~ 123 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANI 123 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHH
Confidence 34579999999999876 89999999887765
No 122
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=66.33 E-value=2.6 Score=39.14 Aligned_cols=13 Identities=31% Similarity=0.532 Sum_probs=11.6
Q ss_pred EEEEecCcccccc
Q 042646 497 LLVLDLNGLLVDI 509 (560)
Q Consensus 497 LLVLDLDETLVHS 509 (560)
|+++||||||++.
T Consensus 1 li~~DlDgTLl~~ 13 (236)
T TIGR02471 1 LIITDLDNTLLGD 13 (236)
T ss_pred CeEEeccccccCC
Confidence 6899999999985
No 123
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=64.80 E-value=3.6 Score=37.24 Aligned_cols=29 Identities=28% Similarity=0.153 Sum_probs=24.1
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRK 556 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~k 556 (560)
.-.+|++.++|+.+.+. |.++|-|++...
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~ 112 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRL 112 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchh
Confidence 34689999999999865 999999998654
No 124
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=64.15 E-value=3.3 Score=43.63 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=26.3
Q ss_pred EeCccHHHHHHHHHhc-cEEEEEccccccccc
Q 042646 529 FKRPCCDEFLSFCFER-FNVGVWSRGSRKIWT 559 (560)
Q Consensus 529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~kYVd 559 (560)
...|++.+||+++.+. +.++|-|++...+++
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~ 247 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLE 247 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHH
Confidence 4579999999999876 999999999877654
No 125
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=62.25 E-value=4.9 Score=40.93 Aligned_cols=30 Identities=17% Similarity=0.063 Sum_probs=25.3
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI 557 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY 557 (560)
+-.+|++.+||+++.+. +.++|-|++...+
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~ 210 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYF 210 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchh
Confidence 45789999999999876 9999999987544
No 126
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=60.15 E-value=4.7 Score=38.94 Aligned_cols=16 Identities=38% Similarity=0.418 Sum_probs=13.9
Q ss_pred eEEEEecCcccccccC
Q 042646 496 KLLVLDLNGLLVDIVA 511 (560)
Q Consensus 496 KLLVLDLDETLVHSSs 511 (560)
|+++|||||||++...
T Consensus 2 k~i~~D~DGtl~~~~~ 17 (257)
T TIGR01458 2 KGVLLDISGVLYISDA 17 (257)
T ss_pred CEEEEeCCCeEEeCCC
Confidence 5899999999998754
No 127
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=59.63 E-value=5.2 Score=35.93 Aligned_cols=27 Identities=19% Similarity=0.282 Sum_probs=20.5
Q ss_pred eEeCccHHHHHHHHHhccEEEEEcccc
Q 042646 528 VFKRPCCDEFLSFCFERFNVGVWSRGS 554 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~FEVVVWTSS~ 554 (560)
+-..|.+.++|+.+...|.++|.|-+.
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~ 124 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGA 124 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCC
Confidence 455677778888887778888888754
No 128
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=59.28 E-value=5 Score=37.07 Aligned_cols=33 Identities=24% Similarity=0.133 Sum_probs=28.5
Q ss_pred eeEeCccHHHHHHHHHhc-cEEEEEccccccccc
Q 042646 527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIWT 559 (560)
Q Consensus 527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYVd 559 (560)
.+..+|++.+||+++.++ +.++|-|++...++.
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~ 105 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVY 105 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHH
Confidence 467899999999999876 999999999877653
No 129
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=58.26 E-value=5.4 Score=37.68 Aligned_cols=30 Identities=10% Similarity=0.060 Sum_probs=25.1
Q ss_pred EeCccHHHHHH-HHH-hccEEEEEcccccccc
Q 042646 529 FKRPCCDEFLS-FCF-ERFNVGVWSRGSRKIW 558 (560)
Q Consensus 529 yKRPhLDEFLd-fVs-E~FEVVVWTSS~~kYV 558 (560)
..+|++.+.|+ ++. +-+.|+|=||+...|+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~ 125 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLV 125 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHH
Confidence 46899999996 666 4799999999988776
No 130
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=57.80 E-value=5.5 Score=37.61 Aligned_cols=12 Identities=50% Similarity=0.894 Sum_probs=0.0
Q ss_pred eEEEEecCcccc
Q 042646 496 KLLVLDLNGLLV 507 (560)
Q Consensus 496 KLLVLDLDETLV 507 (560)
.|.+|||||||+
T Consensus 2 ~la~FDlD~TLi 13 (203)
T TIGR02137 2 EIACLDLEGVLV 13 (203)
T ss_pred eEEEEeCCcccH
No 131
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=57.14 E-value=15 Score=34.97 Aligned_cols=48 Identities=21% Similarity=0.193 Sum_probs=34.0
Q ss_pred CCCCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhcc-E--EEEEccc
Q 042646 490 IGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERF-N--VGVWSRG 553 (560)
Q Consensus 490 i~~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~F-E--VVVWTSS 553 (560)
....+=+.||||+|.||+.-... ..-|-+.+.++.|.+.| . |+|.|-+
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~----------------~i~~~~~~~~~~l~~~~~~~~v~IvSNs 86 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYED----------------EIPPEYAEWLNELKKQFGKDRVLIVSNS 86 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcC----------------cCCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 44567899999999999753211 23466777788888776 3 7888776
No 132
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=55.95 E-value=5.1 Score=34.67 Aligned_cols=32 Identities=28% Similarity=0.286 Sum_probs=27.0
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEccccccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIWT 559 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYVd 559 (560)
+..+|++.+||+++.++ +.++|-|++...++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~ 104 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVE 104 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHH
Confidence 55789999999999876 899999999877653
No 133
>PRK10444 UMP phosphatase; Provisional
Probab=55.00 E-value=6.6 Score=38.20 Aligned_cols=15 Identities=27% Similarity=0.483 Sum_probs=13.2
Q ss_pred eEEEEecCccccccc
Q 042646 496 KLLVLDLNGLLVDIV 510 (560)
Q Consensus 496 KLLVLDLDETLVHSS 510 (560)
+++++||||||++..
T Consensus 2 ~~v~~DlDGtL~~~~ 16 (248)
T PRK10444 2 KNVICDIDGVLMHDN 16 (248)
T ss_pred cEEEEeCCCceEeCC
Confidence 589999999999875
No 134
>PLN02382 probable sucrose-phosphatase
Probab=54.84 E-value=7.9 Score=40.62 Aligned_cols=17 Identities=35% Similarity=0.511 Sum_probs=14.6
Q ss_pred CCCeEEEEecCcccccc
Q 042646 493 SKKKLLVLDLNGLLVDI 509 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHS 509 (560)
..+.+|+.||||||+..
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 35889999999999964
No 135
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=54.66 E-value=6.9 Score=35.19 Aligned_cols=13 Identities=31% Similarity=0.404 Sum_probs=11.9
Q ss_pred eEEEEecCccccc
Q 042646 496 KLLVLDLNGLLVD 508 (560)
Q Consensus 496 KLLVLDLDETLVH 508 (560)
|+|.||+||||+-
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 7899999999993
No 136
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=54.53 E-value=6.6 Score=37.67 Aligned_cols=16 Identities=25% Similarity=0.326 Sum_probs=13.5
Q ss_pred eEEEEecCcccccccC
Q 042646 496 KLLVLDLNGLLVDIVA 511 (560)
Q Consensus 496 KLLVLDLDETLVHSSs 511 (560)
+++++||||||++...
T Consensus 2 ~~~~~D~DGtl~~~~~ 17 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKE 17 (249)
T ss_pred CEEEEeCCCceEcCCe
Confidence 5899999999998643
No 137
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=52.88 E-value=8.5 Score=37.19 Aligned_cols=13 Identities=46% Similarity=0.805 Sum_probs=12.4
Q ss_pred CeEEEEecCcccc
Q 042646 495 KKLLVLDLNGLLV 507 (560)
Q Consensus 495 KKLLVLDLDETLV 507 (560)
+.||+-||||||+
T Consensus 2 ~~ll~sDlD~Tl~ 14 (247)
T PF05116_consen 2 PRLLASDLDGTLI 14 (247)
T ss_dssp SEEEEEETBTTTB
T ss_pred CEEEEEECCCCCc
Confidence 7899999999999
No 138
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=50.27 E-value=19 Score=41.11 Aligned_cols=53 Identities=26% Similarity=0.240 Sum_probs=31.7
Q ss_pred CCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc--cEEEEEcccc
Q 042646 493 SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER--FNVGVWSRGS 554 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~--FEVVVWTSS~ 554 (560)
.++.+|+||.||||+.....+. .|. .+..-|.+.+-|+.+... -.|+|-|...
T Consensus 505 a~~rll~LDyDGTL~~~~~~~~---~p~------~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~ 559 (797)
T PLN03063 505 SNNRLLILGFYGTLTEPRNSQI---KEM------DLGLHPELKETLKALCSDPKTTVVVLSRSG 559 (797)
T ss_pred ccCeEEEEecCccccCCCCCcc---ccc------cCCCCHHHHHHHHHHHcCCCCEEEEEeCCC
Confidence 3678999999999996432211 111 233446666677777654 4566666544
No 139
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=49.28 E-value=22 Score=41.13 Aligned_cols=18 Identities=22% Similarity=0.503 Sum_probs=15.2
Q ss_pred CCCeEEEEecCccccccc
Q 042646 493 SKKKLLVLDLNGLLVDIV 510 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSS 510 (560)
.++++|+||+||||+...
T Consensus 594 ~~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQA 611 (854)
T ss_pred hcCeEEEEecCCcccCCc
Confidence 368999999999999653
No 140
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=49.20 E-value=21 Score=41.98 Aligned_cols=60 Identities=27% Similarity=0.328 Sum_probs=35.7
Q ss_pred CCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc--cEEEEEccccc
Q 042646 493 SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER--FNVGVWSRGSR 555 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~--FEVVVWTSS~~ 555 (560)
.++.||+||.||||+.....|.. .+.. +..+.+..-|.+.+-|+.+... -.|+|-|....
T Consensus 589 a~~RLlfLDyDGTLap~~~~P~~--~~~~-~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~ 650 (934)
T PLN03064 589 SNNRLLILGFNATLTEPVDTPGR--RGDQ-IKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDR 650 (934)
T ss_pred ccceEEEEecCceeccCCCCccc--cccc-ccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCH
Confidence 36789999999999976433321 0110 1111233446677777777754 56777776554
No 141
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=47.88 E-value=8.4 Score=34.37 Aligned_cols=15 Identities=27% Similarity=0.410 Sum_probs=0.0
Q ss_pred EEEEecCcccccccC
Q 042646 497 LLVLDLNGLLVDIVA 511 (560)
Q Consensus 497 LLVLDLDETLVHSSs 511 (560)
+.++|+||||+...+
T Consensus 1 ~a~FD~DgTL~~~~s 15 (202)
T TIGR01490 1 LAFFDFDGTLTAKDT 15 (202)
T ss_pred CeEEccCCCCCCCch
No 142
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=46.94 E-value=10 Score=36.73 Aligned_cols=15 Identities=20% Similarity=0.202 Sum_probs=12.9
Q ss_pred eEEEEecCccccccc
Q 042646 496 KLLVLDLNGLLVDIV 510 (560)
Q Consensus 496 KLLVLDLDETLVHSS 510 (560)
+++++||||||++..
T Consensus 3 ~~~~~D~DGtl~~~~ 17 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE 17 (279)
T ss_pred cEEEEeCCCceEcCC
Confidence 589999999999853
No 143
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=45.15 E-value=12 Score=32.59 Aligned_cols=28 Identities=18% Similarity=0.058 Sum_probs=21.8
Q ss_pred CccHH----HHHHHHH-hccEEEEEcccccccc
Q 042646 531 RPCCD----EFLSFCF-ERFNVGVWSRGSRKIW 558 (560)
Q Consensus 531 RPhLD----EFLdfVs-E~FEVVVWTSS~~kYV 558 (560)
+|.+. +||+++. ..+.|+|-|++...++
T Consensus 87 ~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i 119 (192)
T PF12710_consen 87 FPGFIPDAMELIRELKDNGIKVVIVSGSPDEII 119 (192)
T ss_dssp CTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHH
T ss_pred CcCchhhHHHHHHHHHHCCCEEEEECCCcHHHH
Confidence 46666 9999984 5699999999866554
No 144
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=44.95 E-value=13 Score=32.67 Aligned_cols=27 Identities=22% Similarity=0.190 Sum_probs=22.3
Q ss_pred EeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646 529 FKRPCCDEFLSFCFER-FNVGVWSRGSR 555 (560)
Q Consensus 529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~ 555 (560)
..||.+.++|+.+.+. +.++|.|...+
T Consensus 127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~ 154 (215)
T PF00702_consen 127 PLRPGAKEALQELKEAGIKVAILTGDNE 154 (215)
T ss_dssp EBHTTHHHHHHHHHHTTEEEEEEESSEH
T ss_pred cchhhhhhhhhhhhccCcceeeeecccc
Confidence 4689999999999887 88999985543
No 145
>PF15006 DUF4517: Domain of unknown function (DUF4517)
Probab=44.86 E-value=10 Score=36.29 Aligned_cols=26 Identities=35% Similarity=0.473 Sum_probs=19.6
Q ss_pred cccccccccccCccccccCC--Ccccccc
Q 042646 358 KKKKCSNLLVNGVDCIKEDG--DSLMKNV 384 (560)
Q Consensus 358 ~~~~~s~~~~ngv~c~ke~~--ds~~~n~ 384 (560)
.+.||-|+|.+|||||.... || +.||
T Consensus 131 ~k~kGTPmLr~GVhcigve~e~dS-e~Sd 158 (163)
T PF15006_consen 131 GKGKGTPMLRDGVHCIGVEKEEDS-EASD 158 (163)
T ss_pred cCCCCCcchhcCcEEeeecccccc-cccc
Confidence 35679999999999998765 44 4443
No 146
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=44.79 E-value=27 Score=33.19 Aligned_cols=50 Identities=14% Similarity=0.265 Sum_probs=31.1
Q ss_pred EEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646 498 LVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRG 553 (560)
Q Consensus 498 LVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS 553 (560)
+|.|+||||.-+-. ...+.+ +-+.- +.+|++.+|+..+.++ |.++=-||.
T Consensus 2 VvsDIDGTiT~SD~--~G~i~~---~~G~d-~~h~g~~~l~~~i~~~GY~ilYlTaR 52 (157)
T PF08235_consen 2 VVSDIDGTITKSDV--LGHILP---ILGKD-WTHPGAAELYRKIADNGYKILYLTAR 52 (157)
T ss_pred EEEeccCCcCccch--hhhhhh---ccCch-hhhhcHHHHHHHHHHCCeEEEEECcC
Confidence 68999999976521 000000 11112 6889999999888887 766555554
No 147
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=44.42 E-value=13 Score=36.40 Aligned_cols=17 Identities=35% Similarity=0.397 Sum_probs=15.0
Q ss_pred CCCCeEEEEecCccccc
Q 042646 492 HSKKKLLVLDLNGLLVD 508 (560)
Q Consensus 492 ~~KKKLLVLDLDETLVH 508 (560)
..+-+.+|||||+|||-
T Consensus 25 ~~Gikgvi~DlDNTLv~ 41 (175)
T COG2179 25 AHGIKGVILDLDNTLVP 41 (175)
T ss_pred HcCCcEEEEeccCceec
Confidence 45889999999999985
No 148
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=43.57 E-value=17 Score=36.63 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=28.7
Q ss_pred eeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
-+..|||..+|.+|+.++ -.++|-||+|.-|+
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI 103 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFI 103 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHH
Confidence 478899999999999988 78999999998765
No 149
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=42.99 E-value=14 Score=33.79 Aligned_cols=29 Identities=10% Similarity=0.043 Sum_probs=20.3
Q ss_pred eEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646 528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRK 556 (560)
Q Consensus 528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~k 556 (560)
.-.=|+..+.|+.+.+. |++++-||+...
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 33558899999999988 588888877654
No 150
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=42.68 E-value=16 Score=37.20 Aligned_cols=32 Identities=16% Similarity=0.249 Sum_probs=28.2
Q ss_pred eeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646 527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW 558 (560)
Q Consensus 527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV 558 (560)
.+..||++.+||++|.++ +.++|+|++...++
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~I 151 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVL 151 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHH
Confidence 578899999999999876 99999999987654
No 151
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=42.15 E-value=18 Score=33.42 Aligned_cols=16 Identities=13% Similarity=0.237 Sum_probs=13.6
Q ss_pred CeEEEEecCccccccc
Q 042646 495 KKLLVLDLNGLLVDIV 510 (560)
Q Consensus 495 KKLLVLDLDETLVHSS 510 (560)
++++|+|+||||+...
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 6699999999999753
No 152
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=41.81 E-value=30 Score=32.38 Aligned_cols=15 Identities=40% Similarity=0.758 Sum_probs=13.6
Q ss_pred CeEEEEecCcccccc
Q 042646 495 KKLLVLDLNGLLVDI 509 (560)
Q Consensus 495 KKLLVLDLDETLVHS 509 (560)
=|++|+|+||+|-+-
T Consensus 7 i~~~v~d~dGv~tdg 21 (169)
T TIGR02726 7 IKLVILDVDGVMTDG 21 (169)
T ss_pred CeEEEEeCceeeECC
Confidence 589999999999885
No 153
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=40.05 E-value=15 Score=36.71 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=12.2
Q ss_pred EEEEecCccccccc
Q 042646 497 LLVLDLNGLLVDIV 510 (560)
Q Consensus 497 LLVLDLDETLVHSS 510 (560)
.++||+|||||+..
T Consensus 2 ~~ifD~DGvL~~g~ 15 (321)
T TIGR01456 2 GFAFDIDGVLFRGK 15 (321)
T ss_pred EEEEeCcCceECCc
Confidence 58999999999864
No 154
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=38.83 E-value=14 Score=43.20 Aligned_cols=30 Identities=23% Similarity=0.272 Sum_probs=25.5
Q ss_pred eCccHHHHHHHHHhc-cEEEEEccccccccc
Q 042646 530 KRPCCDEFLSFCFER-FNVGVWSRGSRKIWT 559 (560)
Q Consensus 530 KRPhLDEFLdfVsE~-FEVVVWTSS~~kYVd 559 (560)
..|++.+||+++.+. |.++|-|++...++.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~ 192 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVD 192 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHH
Confidence 479999999999876 999999998877653
No 155
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=34.75 E-value=28 Score=32.19 Aligned_cols=33 Identities=24% Similarity=0.137 Sum_probs=28.8
Q ss_pred eeEeCccHHHHHHHHHhc-cEEEEEccccccccc
Q 042646 527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIWT 559 (560)
Q Consensus 527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYVd 559 (560)
.+..||++.+||+++.++ +.++|-|++...+++
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~ 101 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVY 101 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHH
Confidence 467999999999999986 999999999877653
No 156
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=29.67 E-value=22 Score=33.83 Aligned_cols=14 Identities=21% Similarity=0.344 Sum_probs=11.7
Q ss_pred EEEecCcccccccC
Q 042646 498 LVLDLNGLLVDIVA 511 (560)
Q Consensus 498 LVLDLDETLVHSSs 511 (560)
++||+||||++...
T Consensus 1 ~lfD~DGvL~~~~~ 14 (236)
T TIGR01460 1 FLFDIDGVLWLGHK 14 (236)
T ss_pred CEEeCcCccCcCCc
Confidence 48999999998654
No 157
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=29.64 E-value=41 Score=29.14 Aligned_cols=14 Identities=29% Similarity=0.501 Sum_probs=11.5
Q ss_pred EEEEecCccccccc
Q 042646 497 LLVLDLNGLLVDIV 510 (560)
Q Consensus 497 LLVLDLDETLVHSS 510 (560)
|.|+|+||||+...
T Consensus 1 l~~fD~DgTl~~~~ 14 (177)
T TIGR01488 1 LAIFDFDGTLTRQD 14 (177)
T ss_pred CEEecCccccccch
Confidence 57999999999743
No 158
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=29.17 E-value=40 Score=29.67 Aligned_cols=15 Identities=47% Similarity=0.910 Sum_probs=13.5
Q ss_pred CeEEEEecCcccccc
Q 042646 495 KKLLVLDLNGLLVDI 509 (560)
Q Consensus 495 KKLLVLDLDETLVHS 509 (560)
-|++|+|+||||++.
T Consensus 4 ~k~viFD~DGTLid~ 18 (201)
T TIGR01491 4 IKLIIFDLDGTLTDV 18 (201)
T ss_pred ceEEEEeCCCCCcCC
Confidence 579999999999985
No 159
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=28.65 E-value=31 Score=33.82 Aligned_cols=17 Identities=47% Similarity=0.718 Sum_probs=14.5
Q ss_pred CCeEEEEecCccccccc
Q 042646 494 KKKLLVLDLNGLLVDIV 510 (560)
Q Consensus 494 KKKLLVLDLDETLVHSS 510 (560)
.=||||||.||||.+..
T Consensus 7 ~IkLli~DVDGvLTDG~ 23 (170)
T COG1778 7 NIKLLILDVDGVLTDGK 23 (170)
T ss_pred hceEEEEeccceeecCe
Confidence 45899999999998864
No 160
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=23.78 E-value=1e+02 Score=33.94 Aligned_cols=54 Identities=15% Similarity=0.236 Sum_probs=30.9
Q ss_pred CCCeEEEEecCcccccccCCCCC-CCCCCeeeccceeEeCccHHHHHHHHHh-ccEEEEEcc
Q 042646 493 SKKKLLVLDLNGLLVDIVASPYH-RYRPDKMVSNKAVFKRPCCDEFLSFCFE-RFNVGVWSR 552 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHSSskpp~-g~kPDfkV~~yyVyKRPhLDEFLdfVsE-~FEVVVWTS 552 (560)
...|...||||||||+....... -...| .-+.-|.+..=|+.+.+ .|-++|||-
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~d------w~~l~~~vp~Klktl~~~g~~l~iftn 128 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMD------WRILFPEVPSKLKTLYQDGIKLFIFTN 128 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCcc------ceeeccccchhhhhhccCCeEEEEEec
Confidence 47899999999999997543211 01122 22233444444455544 377777764
No 161
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=23.73 E-value=59 Score=35.58 Aligned_cols=17 Identities=24% Similarity=0.354 Sum_probs=14.6
Q ss_pred CCCeEEEEecCcccccc
Q 042646 493 SKKKLLVLDLNGLLVDI 509 (560)
Q Consensus 493 ~KKKLLVLDLDETLVHS 509 (560)
....++++|+||||+++
T Consensus 20 ~~~~~~~FDfDGTLt~~ 36 (497)
T PLN02177 20 RSNQTVAADLDGTLLIS 36 (497)
T ss_pred ccccEEEEecCCcccCC
Confidence 45778999999999984
No 162
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=23.53 E-value=66 Score=29.06 Aligned_cols=16 Identities=31% Similarity=0.515 Sum_probs=13.6
Q ss_pred CeEEEEecCccccccc
Q 042646 495 KKLLVLDLNGLLVDIV 510 (560)
Q Consensus 495 KKLLVLDLDETLVHSS 510 (560)
-++++|||||||+++.
T Consensus 2 ~~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTS 17 (221)
T ss_pred ceEEEEeCCCCCcCCC
Confidence 3689999999999864
No 163
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=23.39 E-value=88 Score=26.01 Aligned_cols=14 Identities=43% Similarity=0.786 Sum_probs=11.8
Q ss_pred EEEecCcccccccC
Q 042646 498 LVLDLNGLLVDIVA 511 (560)
Q Consensus 498 LVLDLDETLVHSSs 511 (560)
+||||||||++...
T Consensus 1 iifD~dgtL~d~~~ 14 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP 14 (176)
T ss_dssp EEEESBTTTEEHHH
T ss_pred cEEECCCCcEeCHH
Confidence 68999999998654
No 164
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=21.94 E-value=51 Score=32.70 Aligned_cols=63 Identities=11% Similarity=0.152 Sum_probs=37.6
Q ss_pred CCeEEEEecCcccccccCCCCCC----------C---CC-----------Cee----eccceeEeCccHHHHHHHHHhc-
Q 042646 494 KKKLLVLDLNGLLVDIVASPYHR----------Y---RP-----------DKM----VSNKAVFKRPCCDEFLSFCFER- 544 (560)
Q Consensus 494 KKKLLVLDLDETLVHSSskpp~g----------~---kP-----------Dfk----V~~yyVyKRPhLDEFLdfVsE~- 544 (560)
..-|+|||+|.||+-.. .+..+ . .+ +.. ....+...=|.+.+|+..+.+.
T Consensus 19 ~~tLvvfDiDdTLi~~~-~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~ 97 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPK-QPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKG 97 (252)
T ss_pred CCeEEEEEcchhhhcCc-cccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCC
Confidence 67899999999999654 22110 0 00 000 0112445556777777777644
Q ss_pred cEEEEEccccccc
Q 042646 545 FNVGVWSRGSRKI 557 (560)
Q Consensus 545 FEVVVWTSS~~kY 557 (560)
.-|+..|+..+.+
T Consensus 98 ~~v~alT~~~~~~ 110 (252)
T PF11019_consen 98 IPVIALTARGPNM 110 (252)
T ss_pred CcEEEEcCCChhh
Confidence 7888888876544
No 165
>KOG2422 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.45 E-value=74 Score=36.55 Aligned_cols=43 Identities=21% Similarity=0.262 Sum_probs=32.4
Q ss_pred CCCcccccccCCcccccccchhhHHHhhhhcCCCCCCCCCchh
Q 042646 79 SNPGLIEACDNSPLMRSGNKKNRKRRRRKRKSSAPKTDNTDAD 121 (560)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (560)
++-|---+|--++.-+.||||+.||+.+|-++-++++..|+.+
T Consensus 74 ~~~~es~~~~~~~~sk~k~KKK~krkkKk~~~~~d~~e~s~de 116 (665)
T KOG2422|consen 74 SVGQESRITLASKSSKNKKKKKKKRKKKKSTAEVDKDEGSDDE 116 (665)
T ss_pred ccCCcccccccchhhccccchhhhhccccccCccccccCCchH
Confidence 4445556788888888888888888888888888887766653
No 166
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=20.05 E-value=96 Score=26.72 Aligned_cols=12 Identities=50% Similarity=1.038 Sum_probs=10.0
Q ss_pred EEEecCcccccc
Q 042646 498 LVLDLNGLLVDI 509 (560)
Q Consensus 498 LVLDLDETLVHS 509 (560)
+++||||||++.
T Consensus 2 vlFDlDgtLv~~ 13 (183)
T TIGR01509 2 ILFDLDGVLVDT 13 (183)
T ss_pred eeeccCCceech
Confidence 688888888886
Done!