Your job contains 1 sequence.
>042647
PRSHHQIRSNYKIYLTYGLTFVSFSLRSSEYNARNAQYHMIGNAIVEQISRNQDGNFTGV
VHLEGYKTTVLKLTWLLEIIELVGFDYLITKKKVC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042647
(95 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2146769 - symbol:AT5G26710 species:3702 "Arabi... 135 1.0e-15 2
POMBASE|SPAC17A5.15c - symbol:SPAC17A5.15c "glutamate-tRN... 112 3.7e-09 2
DICTYBASE|DDB_G0287467 - symbol:gluS "glutamate-tRNA liga... 107 3.0e-08 2
CGD|CAL0002084 - symbol:orf19.7057 species:5476 "Candida ... 87 2.6e-06 2
ASPGD|ASPL0000017154 - symbol:AN8224 species:162425 "Emer... 70 6.1e-06 2
SGD|S000003214 - symbol:GUS1 "Glutamyl-tRNA synthetase (G... 100 0.00032 1
>TAIR|locus:2146769 [details] [associations]
symbol:AT5G26710 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0004818
"glutamate-tRNA ligase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0006424
"glutamyl-tRNA aminoacylation" evidence=IEA] [GO:0016876 "ligase
activity, forming aminoacyl-tRNA and related compounds"
evidence=IEA] [GO:0043039 "tRNA aminoacylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0007010 "cytoskeleton organization" evidence=RCA]
[GO:0009165 "nucleotide biosynthetic process" evidence=RCA]
[GO:0010498 "proteasomal protein catabolic process" evidence=RCA]
InterPro:IPR000924 InterPro:IPR001412 InterPro:IPR004526
InterPro:IPR011035 InterPro:IPR020058 InterPro:IPR020059
InterPro:IPR020061 Pfam:PF00749 Pfam:PF03950 PRINTS:PR00987
PROSITE:PS00178 GO:GO:0005829 GO:GO:0005524 EMBL:CP002688
Gene3D:1.20.1050.10 InterPro:IPR010987 SUPFAM:SSF47616
Gene3D:3.40.50.620 InterPro:IPR014729 UniGene:At.49067
UniGene:At.71213 PANTHER:PTHR10119 GO:GO:0006424 Gene3D:2.40.240.10
InterPro:IPR020056 SUPFAM:SSF50715 KO:K01885 GO:GO:0004818
Gene3D:1.10.1160.10 HSSP:P00962 TIGRFAMs:TIGR00463
HOGENOM:HOG000259234 OMA:DFDHLIT BRENDA:6.1.1.17 EMBL:AF067773
EMBL:AY099592 EMBL:BT000248 EMBL:AK226448 IPI:IPI00521816
PIR:T52043 RefSeq:NP_850874.1 ProteinModelPortal:O82462
DIP:DIP-48341N STRING:O82462 PRIDE:O82462 EnsemblPlants:AT5G26710.1
GeneID:832718 KEGG:ath:AT5G26710 TAIR:At5g26710 InParanoid:O82462
PhylomeDB:O82462 ProtClustDB:PLN02907 ArrayExpress:O82462
Genevestigator:O82462 Uniprot:O82462
Length = 719
Score = 135 (52.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 42 GNAIVEQISRNQDGNFT---GVVHLEG-YKTTVLKLTWLLEIIELVG-----FDYLITKK 92
GNAIV++I+++++G T GV++L+G KTT LKLTWL + ELV FDYLITKK
Sbjct: 590 GNAIVKEITKDEEGRVTALSGVLNLQGSVKTTKLKLTWLPDTNELVNLTLTEFDYLITKK 649
Query: 93 KV 94
K+
Sbjct: 650 KL 651
Score = 98 (39.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 1 PRSHHQIRSNYKIYLTY--------GLTFVSFSLRSSEYNARNAQYHMI 41
P SHH+I YKIY TY L ++ +LRSSEY+ RNAQY +
Sbjct: 377 PMSHHRIGDKYKIYPTYDFACPFVDSLEGITHALRSSEYHDRNAQYFKV 425
>POMBASE|SPAC17A5.15c [details] [associations]
symbol:SPAC17A5.15c "glutamate-tRNA ligase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004818 "glutamate-tRNA ligase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006424
"glutamyl-tRNA aminoacylation" evidence=ISS] InterPro:IPR000924
InterPro:IPR001412 InterPro:IPR004526 InterPro:IPR011035
InterPro:IPR020058 InterPro:IPR020059 InterPro:IPR020061
Pfam:PF00749 Pfam:PF03950 PRINTS:PR00987 PROSITE:PS00178
PomBase:SPAC17A5.15c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0003723 GO:GO:0002181 Gene3D:1.20.1050.10
InterPro:IPR010987 SUPFAM:SSF47616 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0008 PANTHER:PTHR10119 GO:GO:0006424
Gene3D:2.40.240.10 InterPro:IPR020056 SUPFAM:SSF50715 KO:K01885
GO:GO:0004818 Gene3D:1.10.1160.10 TIGRFAMs:TIGR00463 PIR:T37830
RefSeq:NP_593483.1 ProteinModelPortal:O13775 STRING:O13775
EnsemblFungi:SPAC17A5.15c.1 GeneID:2542408 KEGG:spo:SPAC17A5.15c
HOGENOM:HOG000259234 OMA:DFDHLIT OrthoDB:EOG4ZSDBB NextBio:20803467
Uniprot:O13775
Length = 716
Score = 112 (44.5 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 42 GNAIVEQISRNQDGNFTGV---VHLEG-YKTTVLKLTWLLEI-----IELVGFDYLITKK 92
GNA V +I+R+ G T + +HL+G +K T K+TWL + ++LV FDYLITK
Sbjct: 583 GNAYVREINRDASGKVTSLKLELHLDGDFKKTEKKVTWLADTEDKTPVDLVDFDYLITKD 642
Query: 93 KV 94
K+
Sbjct: 643 KL 644
Score = 58 (25.5 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 4 HHQIRSNYKIYLTY--------GLTFVSFSLRSSEYNARNAQYHMIGNAI 45
HH+ + Y+ Y TY L V+ +LR++EY RN Y + A+
Sbjct: 373 HHRTGTKYRAYPTYDFACPIVDSLEGVTHALRTTEYRDRNPLYQWMIKAM 422
Score = 31 (16.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 21 FVSFSLRSSEYN 32
FV +SL S++++
Sbjct: 124 FVGYSLTSADFS 135
>DICTYBASE|DDB_G0287467 [details] [associations]
symbol:gluS "glutamate-tRNA ligase" species:44689
"Dictyostelium discoideum" [GO:0043039 "tRNA aminoacylation"
evidence=IEA] [GO:0016876 "ligase activity, forming aminoacyl-tRNA
and related compounds" evidence=IEA] [GO:0006424 "glutamyl-tRNA
aminoacylation" evidence=IEA;ISS] [GO:0006418 "tRNA aminoacylation
for protein translation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004818 "glutamate-tRNA ligase
activity" evidence=IEA;ISS] [GO:0004812 "aminoacyl-tRNA ligase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000924
InterPro:IPR001412 InterPro:IPR004526 InterPro:IPR011035
InterPro:IPR020058 InterPro:IPR020059 InterPro:IPR020061
Pfam:PF00749 Pfam:PF03950 PRINTS:PR00987 PROSITE:PS00178
dictyBase:DDB_G0287467 InterPro:IPR004046 Pfam:PF00043
GO:GO:0005524 GO:GO:0005737 GenomeReviews:CM000154_GR GO:GO:0003723
EMBL:AAFI02000101 Gene3D:1.20.1050.10 InterPro:IPR010987
SUPFAM:SSF47616 PROSITE:PS50405 Gene3D:3.40.50.620
InterPro:IPR014729 InterPro:IPR017933 eggNOG:COG0008
PANTHER:PTHR10119 GO:GO:0006424 Gene3D:2.40.240.10
InterPro:IPR020056 SUPFAM:SSF50715 KO:K01885 GO:GO:0004818
Gene3D:1.10.1160.10 RefSeq:XP_637203.1 HSSP:P00962
ProteinModelPortal:Q54KB8 STRING:Q54KB8 PRIDE:Q54KB8
EnsemblProtists:DDB0231321 GeneID:8626140 KEGG:ddi:DDB_G0287467
InParanoid:Q54KB8 OMA:QWLDYAP TIGRFAMs:TIGR00463 Uniprot:Q54KB8
Length = 764
Score = 107 (42.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 42 GNAIVEQISRNQDGN---FTGVVHLEG-YKTTVLKLTWLLE------IIELVGFDYLITK 91
GNAIVE + RN++G+ TG +HLEG K T KL+WL + L +DY+ITK
Sbjct: 602 GNAIVETLQRNENGDVVSMTGKLHLEGDVKKTDKKLSWLSSDCADTVTVVLQDYDYIITK 661
Query: 92 KKV 94
K+
Sbjct: 662 PKL 664
Score = 55 (24.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 4 HHQIRSNYKIYLTYGLTF--------VSFSLRSSEYN-ARNAQYHMI 41
HH+ YK+Y Y ++ +LRS+EYN RN H +
Sbjct: 391 HHRTGDKYKVYPLYDFACPIVDSVEGITHALRSNEYNNKRNLYNHYL 437
>CGD|CAL0002084 [details] [associations]
symbol:orf19.7057 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0017102 "methionyl
glutamyl tRNA synthetase complex" evidence=IEA] [GO:0006424
"glutamyl-tRNA aminoacylation" evidence=IEA] [GO:0004818
"glutamate-tRNA ligase activity" evidence=IEA] InterPro:IPR000924
InterPro:IPR001412 InterPro:IPR004526 InterPro:IPR011035
InterPro:IPR020058 InterPro:IPR020059 InterPro:IPR020061
Pfam:PF00749 Pfam:PF03950 PRINTS:PR00987 PROSITE:PS00178
CGD:CAL0002084 InterPro:IPR004046 Pfam:PF00043 GO:GO:0005524
GO:GO:0005737 Gene3D:1.20.1050.10 InterPro:IPR010987
SUPFAM:SSF47616 EMBL:AACQ01000024 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0008 PANTHER:PTHR10119 GO:GO:0006424
Gene3D:2.40.240.10 InterPro:IPR020056 SUPFAM:SSF50715 KO:K01885
GO:GO:0004818 Gene3D:1.10.1160.10 TIGRFAMs:TIGR00463
RefSeq:XP_720349.1 RefSeq:XP_888694.1 ProteinModelPortal:Q5AFL1
STRING:Q5AFL1 GeneID:3638029 GeneID:3704032 KEGG:cal:CaO19.7057
KEGG:cal:CaO19_7057 Uniprot:Q5AFL1
Length = 725
Score = 87 (35.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 42 GNAIVEQISRNQD--GNFTGVVHLEG-YKTTVLKLTWLLEI-----IELVGFDYLITKKK 93
GN IV ++++ D + +HLEG ++ T K+TWL I++V FD+LITK K
Sbjct: 592 GNIIVSKVNKEGDIVKSVEANLHLEGDFRKTSKKITWLAYTKDKVEIDMVDFDHLITKDK 651
Query: 94 V 94
+
Sbjct: 652 L 652
Score = 56 (24.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 4 HHQIRSNYKIYLTY--------GLTFVSFSLRSSEYNARNAQY 38
HH+ + +K+Y Y + V+ +LR++EY RN QY
Sbjct: 383 HHRTGTEWKMYPIYDFCVPVVDSIEGVTHALRTNEYRDRNPQY 425
>ASPGD|ASPL0000017154 [details] [associations]
symbol:AN8224 species:162425 "Emericella nidulans"
[GO:0006424 "glutamyl-tRNA aminoacylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004818 "glutamate-tRNA
ligase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR000924
InterPro:IPR004526 InterPro:IPR011035 InterPro:IPR020058
InterPro:IPR020059 InterPro:IPR020061 Pfam:PF00749 Pfam:PF03950
GO:GO:0005739 GO:GO:0005524 EMBL:BN001302 InterPro:IPR010987
SUPFAM:SSF47616 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0017102
PANTHER:PTHR10119 GO:GO:0006424 Gene3D:2.40.240.10
InterPro:IPR020056 SUPFAM:SSF50715 GO:GO:0004818
Gene3D:1.10.1160.10 TIGRFAMs:TIGR00463 HOGENOM:HOG000259234
OMA:DFDHLIT EnsemblFungi:CADANIAT00004274 Uniprot:C8V7E4
Length = 680
Score = 70 (29.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 42 GNAIVEQISRNQDGNFTGV---VHLEG-YKTTVLKLTWL-----LEIIELVGFDYLITK 91
GNA V +I + G T + ++ +G +K T K+TWL L ++LV FDYL+ K
Sbjct: 552 GNAFVRKIVTDASGVVTELELDLNEKGDFKKTEKKVTWLSTDQDLVPVDLVDFDYLLNK 610
Score = 69 (29.3 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 1 PRSHHQIRSNYKIYLTY--------GLTFVSFSLRSSEYNARNAQY 38
P HH+ + YK Y TY L V+ +LR+ EY RN QY
Sbjct: 339 PAPHHRTGTKYKAYPTYDFCCPIIDSLEGVTHALRTIEYRDRNPQY 384
>SGD|S000003214 [details] [associations]
symbol:GUS1 "Glutamyl-tRNA synthetase (GluRS)" species:4932
"Saccharomyces cerevisiae" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0016876 "ligase activity, forming
aminoacyl-tRNA and related compounds" evidence=IEA] [GO:0043039
"tRNA aminoacylation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0004818 "glutamate-tRNA ligase activity"
evidence=IEA;IDA] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=IEA] [GO:0006424 "glutamyl-tRNA
aminoacylation" evidence=IEA;IDA] [GO:0017102 "methionyl glutamyl
tRNA synthetase complex" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] InterPro:IPR000924
InterPro:IPR001412 InterPro:IPR004526 InterPro:IPR011035
InterPro:IPR020058 InterPro:IPR020059 InterPro:IPR020061
Pfam:PF00749 Pfam:PF03950 PRINTS:PR00987 PROSITE:PS00178
SGD:S000003214 GO:GO:0005739 GO:GO:0005524 EMBL:BK006941
GO:GO:0003723 EMBL:X94357 Gene3D:1.20.1050.10 InterPro:IPR010987
SUPFAM:SSF47616 EMBL:Z49149 Gene3D:3.40.50.620 InterPro:IPR014729
PDB:2HRK PDB:2HSM PDBsum:2HRK PDBsum:2HSM GO:GO:0017102
eggNOG:COG0008 PANTHER:PTHR10119 GO:GO:0006424 Gene3D:2.40.240.10
InterPro:IPR020056 SUPFAM:SSF50715 EMBL:Z72767 KO:K01885
GO:GO:0004818 Gene3D:1.10.1160.10 TIGRFAMs:TIGR00463
HOGENOM:HOG000259234 OMA:DFDHLIT OrthoDB:EOG4ZSDBB EMBL:U32265
PIR:S53934 RefSeq:NP_011269.2 PDB:2HRA PDBsum:2HRA
ProteinModelPortal:P46655 SMR:P46655 DIP:DIP-2212N IntAct:P46655
MINT:MINT-491904 STRING:P46655 PaxDb:P46655 PeptideAtlas:P46655
EnsemblFungi:YGL245W GeneID:852606 KEGG:sce:YGL245W CYGD:YGL245w
GeneTree:ENSGT00700000105768 BRENDA:6.1.1.17 SABIO-RK:P46655
EvolutionaryTrace:P46655 NextBio:971793 Genevestigator:P46655
GermOnline:YGL245W Uniprot:P46655
Length = 708
Score = 100 (40.3 bits), Expect = 0.00032, P = 0.00032
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 42 GNAIVEQISRNQDGNFTGVVHLEG-YKTTVLKLTWLLEI-----IELVGFDYLITKKKV 94
GN I+ + +N DG+ ++LEG +K T KLTWL + ++LV FD+LITK ++
Sbjct: 579 GNVIITK--KNDDGSMVAKLNLEGDFKKTKHKLTWLADTKDVVPVDLVDFDHLITKDRL 635
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 95 95 0.00091 102 3 11 22 0.48 29
29 0.43 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 528 (56 KB)
Total size of DFA: 107 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.53u 0.16s 10.69t Elapsed: 00:00:01
Total cpu time: 10.53u 0.16s 10.69t Elapsed: 00:00:01
Start: Fri May 10 18:17:42 2013 End: Fri May 10 18:17:43 2013