Your job contains 1 sequence.
>042649
MEFVGSASTQSCITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNM
NKATIVEDAITYIEKLQMTVKVLSDQLLEMESSSEESERPRNDEINAAEEMKKHGIEEKV
EVTNVDGCKLWIRIISKKKRSRITKFLEAMASHGFELSDTNVTTFKGATLISSCLNGVYS
YKIEAEQVKELLQEIIKSI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042649
(199 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 324 3.4e-29 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 171 3.8e-17 2
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 153 4.2e-16 2
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 146 8.7e-12 2
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 162 1.4e-11 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 157 1.7e-11 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 160 3.3e-11 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 145 3.8e-11 2
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 159 1.1e-10 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 150 3.0e-10 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 147 3.7e-10 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 146 7.1e-10 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 144 1.5e-09 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 143 4.2e-09 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 144 4.8e-09 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 141 6.0e-09 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 140 8.1e-09 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 129 2.0e-08 2
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 137 2.9e-08 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 131 3.6e-08 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 132 3.6e-08 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 131 4.1e-08 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 135 4.4e-08 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 134 4.6e-08 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 132 5.6e-08 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 132 7.7e-08 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 132 9.4e-08 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 130 1.5e-07 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 131 1.5e-07 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 124 8.7e-07 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 128 1.2e-06 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 122 4.7e-06 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 123 8.8e-06 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 119 8.9e-06 1
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 122 1.0e-05 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 123 1.1e-05 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 115 1.3e-05 2
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 122 1.6e-05 1
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 118 1.6e-05 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 119 1.8e-05 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 118 1.8e-05 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 117 1.8e-05 1
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 101 1.8e-05 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 117 2.5e-05 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 117 3.0e-05 1
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 118 3.8e-05 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 114 4.0e-05 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 115 5.0e-05 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 116 5.0e-05 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 115 8.1e-05 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 113 8.3e-05 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 113 8.8e-05 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 115 9.1e-05 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 113 9.4e-05 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 116 9.6e-05 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 111 0.00012 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 114 0.00013 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 95 0.00013 3
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 113 0.00015 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 111 0.00016 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 111 0.00017 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 113 0.00023 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 112 0.00025 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 111 0.00028 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 110 0.00031 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 109 0.00031 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 109 0.00031 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 111 0.00031 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 108 0.00038 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 111 0.00040 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 108 0.00052 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 108 0.00052 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 106 0.00056 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 105 0.00073 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 106 0.00074 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 101 0.00081 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 107 0.00085 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 105 0.00090 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 104 0.00095 1
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 85/206 (41%), Positives = 115/206 (55%)
Query: 5 GSASTQSCITQKRGRRVYGD---DRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMN 61
G + Q + R ++V + D +FKS NL AERRRREKL RL+ LRS VPI+TNM
Sbjct: 3 GGSRFQEPVRMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMT 62
Query: 62 KATIVEDAITYIEKLQMTVKVLSDQLLEMXXXXXXXXRPRND-----EINAA---EEMKK 113
KA+IVEDAITYI +LQ VK L + EM + D E+ + EEMKK
Sbjct: 63 KASIVEDAITYIGELQNNVKNLLETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEMKK 122
Query: 114 HGIEEKVEVTNVDGCKLWXXXXXXXXXXXXTKFLEAMASHGFELSDTNVTTFKGATLISS 173
GIEE V++ + K W TKF+E M GFE+ D ++TT GA LIS+
Sbjct: 123 LGIEENVQLCKIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISA 182
Query: 174 CLNGVYSYKI-EAEQVKELLQEIIKS 198
V + ++ + EQ K+ L E+++S
Sbjct: 183 ---SVQTQELCDVEQTKDFLLEVMRS 205
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 171 (65.3 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 29 KSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQLL 88
++KNL AERRRR+KL++RL LRSLVP IT +++A+I+ DAI Y+++LQ K L D+L
Sbjct: 312 QAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELE 371
Query: 89 EMXXXXXXXXRPR 101
E RP+
Sbjct: 372 ENSETEDGSNRPQ 384
Score = 72 (30.4 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 22/89 (24%), Positives = 44/89 (49%)
Query: 112 KKHGIEEKVEVTNVDGCKLWXXXXXXXXXXXXTKFLEAMASHGFELSDTNVTTFKGATLI 171
K +E +V+V +DG + + T+ +EA+ S G E+++ N T + +L+
Sbjct: 422 KGQEMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRY--LSLV 479
Query: 172 SSCLNGVYSYK--IEAEQVKELLQEIIKS 198
S+ + ++AE V+ L EI ++
Sbjct: 480 SNVFKVEKNDNEMVQAEHVRNSLLEITRN 508
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 153 (58.9 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 31 KNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQL 87
KNL AER+RR+KL+ L LRSLVP IT M++A+I+ DAI YI LQ VK L D+L
Sbjct: 285 KNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDEL 341
Score = 80 (33.2 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 21/85 (24%), Positives = 43/85 (50%)
Query: 114 HGIEEKVEVTNVDGCKLWXXXXXXXXXXXXTKFLEAMASHGFELSDTNVTTFKGATL-IS 172
H +E ++EV V G +L+ + ++AM + G E+ + NVTT+K L +
Sbjct: 412 HRMEPQLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVF 471
Query: 173 SCLNGVYSYKIEAEQVKELLQEIIK 197
+ ++A++V++ L E+ +
Sbjct: 472 RVMVRDSEVAVQADRVRDSLLEVTR 496
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 146 (56.5 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 23 GDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKV 82
G + +KNL AERRRR+KL++RL LRS+VP I+ M++A+I+ DAI Y+++L +
Sbjct: 328 GKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKIND 387
Query: 83 LSDQL 87
L ++L
Sbjct: 388 LQNEL 392
Score = 45 (20.9 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 171 ISSCLNGVYSYKIEAEQVKE---LLQEIIKSI 199
+ SC NG +AEQ K+ LL E IK++
Sbjct: 482 VISCFNGFTLDIFKAEQCKDGPGLLPEEIKAV 513
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 162 (62.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 47/164 (28%), Positives = 79/164 (48%)
Query: 30 SKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQLLE 89
SKNL AERRRR++L++RL LRS+VP IT M++ +I+ DAI Y+++L + L + E
Sbjct: 150 SKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQE 209
Query: 90 MXXXXXXXXRPRNDEINAAEEMKKHGIEEKVEVTNVDGCKLWXXXXXXXXXXXXTKFLEA 149
+ N+ + K ++++ T++D C LE
Sbjct: 210 LGSNSHLSTLITNESM--VRNSLKFEVDQREVNTHIDIC----CPTKPGLVVSTVSTLET 263
Query: 150 MASHGFELSDTNVTTFKGATLISSCLN-GVYSYKIEAEQVKELL 192
+ G E+ ++ F +L +SC G Y + +E K+ L
Sbjct: 264 L---GLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQAL 304
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 44/142 (30%), Positives = 68/142 (47%)
Query: 26 RDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSD 85
++FKSKNL AERRRR +L+ + LR++VP IT M+K + DAI +I+ LQ V L
Sbjct: 60 KEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEVLELQR 119
Query: 86 QLLEMXXXXXXXXRPRNDEINAAEEMKKHGIEEKVEVTNVDGCKLWXXXXXXXXXXXXTK 145
QL + + + H + +VE+ ++ K TK
Sbjct: 120 QLGDSPGEAWEKQGSASCSESFVPTENAH-YQGQVELISLGSSKYNLKIFWTKRAGLFTK 178
Query: 146 FLEAMASHGFELSDTNVTTFKG 167
LEA+ S+ ++ N +F G
Sbjct: 179 VLEALCSYKVQVLSLNTISFYG 200
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 160 (61.4 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 54/186 (29%), Positives = 92/186 (49%)
Query: 15 QKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIE 74
+K+ +++ G SKNL AERRRR++L++RL LRS+VP I+ M++ +I+ DAI Y++
Sbjct: 166 KKKSKKLEGQP----SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMK 221
Query: 75 KLQMTVKVLSDQLLEMXXXXXXX-XRPRND--EINAAEEMKKHG----IEEKVEVTNVDG 127
+L + L D+ E+ + D ++NA E + ++ I+ + E T VD
Sbjct: 222 ELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDI 281
Query: 128 CKLWXXXXXXXXXXXXTKFLEAMASHGFELSDTNVTTFKGATLISSCLNGVYSYK-IEAE 186
C LE + G E+ ++ F +L +SC G I +E
Sbjct: 282 C----CSPKPGLLLSTVNTLETL---GLEIEQCVISCFSDFSLQASCSEGAEQRDFITSE 334
Query: 187 QVKELL 192
+K+ L
Sbjct: 335 DIKQAL 340
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 145 (56.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 23 GDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKV 82
G + +KNL AERRRR+KL++RL LRS+VP I+ M++A+I+ DAI Y+++L +
Sbjct: 299 GKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 358
Query: 83 LSDQL 87
L ++L
Sbjct: 359 LHNEL 363
Score = 39 (18.8 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 171 ISSCLNGVYSYKIEAEQVKE---LLQEIIKSI 199
+ SC NG AEQ +E +L + IK++
Sbjct: 452 VISCFNGFALDVFRAEQCQEGQEILPDQIKAV 483
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 159 (61.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 33/72 (45%), Positives = 53/72 (73%)
Query: 15 QKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIE 74
+KRGR+ + R+ ++ AER+RREKL+ R LRS+VP I+ M+KA+++ DAI+YI+
Sbjct: 380 RKRGRKP-ANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIK 438
Query: 75 KLQMTVKVLSDQ 86
+LQ VK++ D+
Sbjct: 439 ELQEKVKIMEDE 450
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 150 (57.9 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 23 GDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKV 82
GDD +KN+ ER RR KL+ +L LRS+VP IT M+KA+I++DAI YI++LQ +
Sbjct: 85 GDDAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQ 144
Query: 83 LSDQLLEMXXXXXXXXRP 100
+ ++ + P
Sbjct: 145 MLREVAALESAAAASAAP 162
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 147 (56.8 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 30 SKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQLLE 89
SKN+ +ER RR+KL+ RL LRS+VP I+ ++KA++++D+I Y+++L K L ++ E
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 90 MXXXXXXXXRPRND-EINAAE 109
+ P D + N AE
Sbjct: 113 LESRSTLLENPVRDYDCNFAE 133
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 146 (56.5 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 30 SKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQL 87
SKN+ ER RR++L+ +L LR++VP IT M+KA+IV DAI +IEKLQ + L D++
Sbjct: 96 SKNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEI 153
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 144 (55.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 14 TQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYI 73
T G R DR S+ L +ERRRR ++ ++L LRSLVP IT M+KA+IV DA+ Y+
Sbjct: 117 TNNDGTRKTKTDR---SRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYV 173
Query: 74 EKLQMTVKVLSDQL 87
++LQ K L +
Sbjct: 174 QELQSQAKKLKSDI 187
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 143 (55.4 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 15 QKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIE 74
+KRGR+ + R+ ++ AER+RREKL+ R LR++VP I+ M+KA+++ DAITYI
Sbjct: 305 RKRGRKP-ANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYIT 363
Query: 75 KLQMTVKV 82
+Q ++V
Sbjct: 364 DMQKKIRV 371
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 144 (55.7 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 4 VGSASTQSCITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKA 63
VG+ + + +KRGRR + R ++ AER+RREKL+ R LRS+VP I+ M+KA
Sbjct: 407 VGADESGNNRPRKRGRRP-ANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKA 465
Query: 64 TIVEDAITYIEKLQMTVKVL 83
+++ DA++YI +L +KV+
Sbjct: 466 SLLGDAVSYINELHAKLKVM 485
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 141 (54.7 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 27/58 (46%), Positives = 44/58 (75%)
Query: 30 SKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQL 87
SKNL AERRRR++L++RL LRS+VP I+ M++ +I+ D I Y+++L +K L +++
Sbjct: 181 SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEI 238
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 140 (54.3 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 27 DFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQ 86
+FKSKNL +ER+RRE+++ + LR++VP IT +NK I DA+ YI +L + + L D+
Sbjct: 260 NFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDE 319
Query: 87 L 87
L
Sbjct: 320 L 320
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 129 (50.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 25/56 (44%), Positives = 41/56 (73%)
Query: 31 KNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQ 86
+++ AER+RREKLS R + L +VP + M+KA+++ DAI Y+++LQ VK L ++
Sbjct: 181 EHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEE 236
Score = 36 (17.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 10/52 (19%), Positives = 24/52 (46%)
Query: 147 LEAMASHGFELSDTNVTTFKGATL-ISSCLNGVYSYKIEAEQVKELLQEIIK 197
L + + G + +TNV F ++L I+ ++ + + + + L + K
Sbjct: 305 LSEVETIGLTIMNTNVLPFTSSSLDITIMATAGENFSLSVKDIVKKLNQAFK 356
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 31/74 (41%), Positives = 51/74 (68%)
Query: 15 QKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIE 74
+KRGR+ + R+ ++ AER+RREKL+ R LR++VP ++ M+KA+++ DAI YI
Sbjct: 437 KKRGRKP-ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYIN 495
Query: 75 KLQM-TVKVLSDQL 87
+L+ VK S++L
Sbjct: 496 ELKSKVVKTESEKL 509
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 131 (51.2 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 24/56 (42%), Positives = 41/56 (73%)
Query: 31 KNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQ 86
+++ AER+RREK++ R + L +++P + M+KATI+ DA +YI +LQ +K L +Q
Sbjct: 130 EHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQ 185
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 132 (51.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 24/55 (43%), Positives = 41/55 (74%)
Query: 32 NLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQ 86
++ AERRRREK++ R + L +++P + M+KATI+ DA+ Y+++LQ VK L ++
Sbjct: 168 HIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEE 222
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 131 (51.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 31/83 (37%), Positives = 53/83 (63%)
Query: 4 VGSASTQSCITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKA 63
VGS + C+ GRR + +++ AER+RR+KL+ RL+ L +L+P + +KA
Sbjct: 111 VGS-KRKDCVNNG-GRR----EPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKA 164
Query: 64 TIVEDAITYIEKLQMTVKVLSDQ 86
T++EDAI ++++LQ VK L ++
Sbjct: 165 TVLEDAIKHLKQLQERVKKLEEE 187
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 135 (52.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 30/73 (41%), Positives = 52/73 (71%)
Query: 15 QKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIE 74
+KRGR+ + R+ ++ AER+RREKL+ R +LR++VP ++ M+KA+++ DAI+YI
Sbjct: 401 RKRGRKP-ANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYIS 459
Query: 75 KLQMTV-KVLSDQ 86
+L+ + K SD+
Sbjct: 460 ELKSKLQKAESDK 472
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 134 (52.2 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 43/187 (22%), Positives = 90/187 (48%)
Query: 15 QKRGRR-VYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYI 73
+KRGR+ +G D+ ++ AER RREKL++R LR++VP ++ M+K +++EDA+ YI
Sbjct: 328 KKRGRKPAHGRDKPLN--HVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYI 385
Query: 74 EKLQMTVK--VLSDQLLEMXXXXXXXXRPRNDEINAAEEMKKHGIEE-KVEVTNVDGCKL 130
+L+ + L +E+ + + I + + ++ E K+EV ++
Sbjct: 386 NELKSKAENVELEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDA 445
Query: 131 WXXXXXXXXXXXXTKFLEAMASHGFELSDTNVTTFKGATLISSCLN-GVYSYKIEAEQVK 189
+ + A+ E++ +++ + + + G+ YK E+++
Sbjct: 446 MVRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKMGLRIYK--QEELR 503
Query: 190 ELLQEII 196
+LL I
Sbjct: 504 DLLMSKI 510
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 132 (51.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 27/93 (29%), Positives = 55/93 (59%)
Query: 32 NLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQLLEMX 91
++ AE++RREKL++R LR++VP ++ M+KA+++ DA++YIE L+ + L ++ +M
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMK 309
Query: 92 XXXXXXXRPRNDEINAAEEMKKHGIEEKVEVTN 124
+ N N + ++ + +K +N
Sbjct: 310 MTETD--KLDNSSSNTSPSSVEYQVNQKPSKSN 340
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 132 (51.5 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 32 NLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSD 85
++ AERRRREKL+ + +TLRS+VP +T M+K +I+ D I Y+ L+ V L +
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELEN 417
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 132 (51.5 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 27/63 (42%), Positives = 47/63 (74%)
Query: 15 QKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIE 74
+KRGR+ + R+ ++ AER+RREKL+ R +LR++VP ++ M+KA+++ DAI+YI
Sbjct: 400 RKRGRKP-ANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYIN 458
Query: 75 KLQ 77
+L+
Sbjct: 459 ELK 461
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/54 (50%), Positives = 41/54 (75%)
Query: 30 SKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVL 83
SKNL AERRRR++L++RL LRS+VP I+ M++ +I+ D I Y+++L +K L
Sbjct: 195 SKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNL 248
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 131 (51.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/63 (42%), Positives = 46/63 (73%)
Query: 15 QKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIE 74
+KRGR+ + R+ ++ AER+RREKL+ R LR++VP ++ M+KA+++ DAI+YI
Sbjct: 509 RKRGRKP-ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIN 567
Query: 75 KLQ 77
+L+
Sbjct: 568 ELR 570
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 124 (48.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 25/54 (46%), Positives = 43/54 (79%)
Query: 37 RRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQLLEM 90
R+RRE++++RL TL+SLVP T ++ +T++EDA+ Y++ LQ+ +K+LS + L M
Sbjct: 148 RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSEDLWM 201
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 128 (50.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 32/100 (32%), Positives = 50/100 (50%)
Query: 17 RGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKL 76
RG R ++ +ERRRREKL+ L L+S+VP I ++KA+I+E+ I Y++ L
Sbjct: 378 RGSRAALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVL 437
Query: 77 QMTVKVLSDQLLEMXXXXXXXXRPRNDEINAAEEMKKHGI 116
+ VK L + R EI E + + G+
Sbjct: 438 EKRVKELESSSEPSHQRATETGQQRRCEITGKELVSEIGV 477
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 122 (48.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 32 NLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQLLE 89
++ AER+RREKL+ R + L +L+P + M+KA+++ DAI +I+ LQ +VK +Q E
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKE 184
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 123 (48.4 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 5 GSASTQSCITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKAT 64
GSA + + R RR G D S AER RREK+S+R+ L+ LVP NKA+
Sbjct: 303 GSAGNGAPKPRVRARR--GQATDPHS---IAERLRREKISDRMKDLQELVPNSNKTNKAS 357
Query: 65 IVEDAITYIEKLQMTVKVLS 84
++++ I Y++ LQ+ VKVLS
Sbjct: 358 MLDEIIDYVKFLQLQVKVLS 377
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 119 (46.9 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 33/87 (37%), Positives = 55/87 (63%)
Query: 6 SASTQSCITQKRG--RRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKA 63
S ++ +T +G R G D +S L A R+RREK++ RL TL++LVP T ++ +
Sbjct: 153 SDDEKASVTSVKGKTRATKGTATDPQS--LYA-RKRREKINERLKTLQNLVPNGTKVDIS 209
Query: 64 TIVEDAITYIEKLQMTVKVLSDQLLEM 90
T++E+A+ Y++ LQ+ +K+LS L M
Sbjct: 210 TMLEEAVHYVKFLQLQIKLLSSDDLWM 236
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 122 (48.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/73 (41%), Positives = 43/73 (58%)
Query: 11 SCITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAI 70
S + +RG+ +G + N ER RRE+L+ + TLR L P T ++A+IV DAI
Sbjct: 247 SVLECRRGKGEFGKGKG--KANFATERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAI 304
Query: 71 TYIEKLQMTVKVL 83
YI++L TVK L
Sbjct: 305 EYIDELNRTVKEL 317
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 123 (48.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/49 (44%), Positives = 38/49 (77%)
Query: 35 AERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVL 83
+E++RREKL+ R +TLRS++P I+ ++K +I++D I Y++ LQ V+ L
Sbjct: 409 SEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL 457
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 115 (45.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 6 SASTQSC-ITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKAT 64
S S + C +K G+ K A + RRE++S RL L+ LVP T ++ T
Sbjct: 181 SPSKKQCGAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVT 240
Query: 65 IVEDAITYIEKLQMTVKVLS 84
++E AI+Y++ LQ+ VKVL+
Sbjct: 241 MLEKAISYVKFLQLQVKVLA 260
Score = 35 (17.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 184 EAEQVKELLQEIIKS 198
E QVKE L I+ S
Sbjct: 274 EISQVKEALDAILSS 288
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 122 (48.0 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 22/58 (37%), Positives = 39/58 (67%)
Query: 26 RDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVL 83
RD + E++RREKL+ R +TLR ++P I ++K +I++D I Y+++L+ V+ L
Sbjct: 436 RDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQEL 493
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 118 (46.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 15 QKRGRRVYGDDRDFKS-KNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYI 73
++RGR+ G D + ++ AER+RREKL+ R LR+ VP ++ M+KA+++ DA YI
Sbjct: 95 KRRGRKP-GPRPDGPTVSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYI 153
Query: 74 EKLQMTVKVL-SD 85
+L+ V L SD
Sbjct: 154 AELRARVARLESD 166
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 119 (46.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/74 (32%), Positives = 46/74 (62%)
Query: 6 SASTQSCITQKRGRRVYGDDR--DFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKA 63
SA T+ ++ G G + +++ AER+RREK++ R + L +++P + M+KA
Sbjct: 165 SAQTRRASSKGNGGGGSGSSSAAPYAQEHIIAERKRREKINQRFIELSTVIPGLKKMDKA 224
Query: 64 TIVEDAITYIEKLQ 77
TI+ DA+ Y++++Q
Sbjct: 225 TILSDAVRYVKEMQ 238
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 118 (46.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 5 GSASTQSCITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKAT 64
G+ ST S ++ RV + AER RRE+++ R+ +L+ LVP +KA+
Sbjct: 83 GTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKAS 142
Query: 65 IVEDAITYIEKLQMTVKVLS 84
++++ I Y+ LQ+ VKVLS
Sbjct: 143 MLDEIIEYVRFLQLQVKVLS 162
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 117 (46.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 32 NLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVL 83
++ AER+RREKL+ R LR+ VP ++ M+KA+++ DA+ YI +L+ V+ L
Sbjct: 95 HVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERL 146
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 101 (40.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 29 KSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVL 83
KS+ ER RR ++R L++L+P T +A+IV+D I YI +LQ V L
Sbjct: 21 KSRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSEL 75
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 117 (46.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 28/85 (32%), Positives = 56/85 (65%)
Query: 2 EFVGSASTQSCI--TQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITN 59
E +GS+ ++ + RG+R R + NL+ E+RRR +++ ++ L+SL+P +
Sbjct: 10 EALGSSESEQPTRPARPRGKR----SRAAEVHNLS-EKRRRSRINEKMKALQSLIPNSSK 64
Query: 60 MNKATIVEDAITYIEKLQMTVKVLS 84
+KA++++DAI Y+++LQ+ V++LS
Sbjct: 65 TDKASMLDDAIEYLKQLQLQVQMLS 89
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 117 (46.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 32 NLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQLLE 89
++ AER+RREKL+ R + L +LVP + M+KA+++ DA+ +I+ LQ V L +Q E
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKE 210
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 118 (46.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 27 DFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQ 86
+ KS ++ +ERRRREKL+ L L+SL+P + ++KA+I+ + ITY++ L+ VK L
Sbjct: 375 NIKS-HVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELESS 433
Query: 87 LLE 89
E
Sbjct: 434 SRE 436
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 114 (45.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 7 ASTQSCITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIV 66
A+T + K+ G + K +RRRE+++ RL L+ LVP T ++ +T++
Sbjct: 141 AATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTML 200
Query: 67 EDAITYIEKLQMTVKVLS 84
E+A+ Y++ LQ+ +K+LS
Sbjct: 201 EEAVQYVKFLQLQIKLLS 218
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 115 (45.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 15 QKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIE 74
+ RG R + NL AERRRREK++ R+ TL+ L+P K +++ED I Y++
Sbjct: 139 EARGSTSRKRSRAAEMHNL-AERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVK 197
Query: 75 KLQMTV 80
L+M +
Sbjct: 198 SLEMQI 203
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 116 (45.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 31 KN-LTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVL 83
KN + +ERRRREKL+ L L+SLVP I ++KA+I+ + I Y+++L+ V+ L
Sbjct: 187 KNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQEL 240
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 115 (45.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 6 SASTQSCITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATI 65
SA S + R R G D S AER RREK+S R+ L+ LVP +KA++
Sbjct: 227 SAPGNSANAKPRTRARRGQATDPHS---IAERLRREKISERMKNLQVLVPNSNKADKASM 283
Query: 66 VEDAITYIEKLQMTVKVLS 84
+++ I Y++ LQ+ VKVLS
Sbjct: 284 LDEIIDYVKFLQLQVKVLS 302
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 113 (44.8 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 21/56 (37%), Positives = 41/56 (73%)
Query: 31 KNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQ 86
+++ AER+RREKLS + + L +L+P + +K TI++DAI+ +++LQ ++ L ++
Sbjct: 119 EHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEE 174
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 113 (44.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 22/52 (42%), Positives = 42/52 (80%)
Query: 37 RRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLS-DQL 87
R+RRE+++ RL TL++LVP T ++ +T++E+A+ Y++ LQ+ +K+LS D++
Sbjct: 232 RKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDEM 283
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 115 (45.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 25/80 (31%), Positives = 50/80 (62%)
Query: 6 SASTQSCITQKRGRRVYGDDRDFKSKNL--TAERRRREKLSNRLLTLRSLVPIITNMNKA 63
S S I K +R G +R ++ + +ERRRR++++ R+ L+ L+P + +KA
Sbjct: 235 SVSLSDAIGNKSNQRS-GSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKA 293
Query: 64 TIVEDAITYIEKLQMTVKVL 83
+I+++AI Y++ LQ+ ++V+
Sbjct: 294 SILDEAIDYLKSLQLQLQVM 313
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 113 (44.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 27/82 (32%), Positives = 50/82 (60%)
Query: 5 GSASTQSCITQKRGRRVYGDDRDFKSK--NLTAERRRREKLSNRLLTLRSLVPIITNMNK 62
G +S R R G R ++ NL+ E+RRR K++ ++ L+SL+P +K
Sbjct: 80 GGSSEPEAAAGARPRGGSGSKRSRAAEVHNLS-EKRRRSKINEKMKALQSLIPNSNKTDK 138
Query: 63 ATIVEDAITYIEKLQMTVKVLS 84
A+++++AI Y+++LQ+ V++LS
Sbjct: 139 ASMLDEAIEYLKQLQLQVQMLS 160
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 116 (45.9 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 23/72 (31%), Positives = 48/72 (66%)
Query: 13 ITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITY 72
+ +K G R R + NL+ ERRRR++++ ++ L+ L+P ++KA+++++AI Y
Sbjct: 299 VLRKSGTRSTKRSRTAEVHNLS-ERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEY 357
Query: 73 IEKLQMTVKVLS 84
++ LQ+ V+++S
Sbjct: 358 LKTLQLQVQMMS 369
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 111 (44.1 bits), Expect = 0.00012, P = 0.00012
Identities = 37/111 (33%), Positives = 52/111 (46%)
Query: 13 ITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVP-IITNMNKATIVEDAIT 71
+ R RR G D S AER RR K++ RL L+ +VP M AT++++ I
Sbjct: 144 VVHVRARR--GQATDSHS---IAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIIN 198
Query: 72 YIEKLQMTVKVLSDQLLEMXXXXXXXXRPRNDEINAAEEMKKHGIEEKVEV 122
Y++ LQ V+ LS M N E +A E M+K E VE+
Sbjct: 199 YVQSLQNQVEFLS-----MKLTAASSYYDFNSETDAVESMQKAKAREAVEM 244
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 114 (45.2 bits), Expect = 0.00013, P = 0.00013
Identities = 24/82 (29%), Positives = 49/82 (59%)
Query: 4 VGSASTQSCITQKRGRRVYGDDRDFKSKNL--TAERRRREKLSNRLLTLRSLVPIITNMN 61
+G ST + + G R ++ + +ERRRR++++ R+ L+ L+P + +
Sbjct: 231 IGLTSTDDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTD 290
Query: 62 KATIVEDAITYIEKLQMTVKVL 83
KA+I+++AI Y++ LQM ++V+
Sbjct: 291 KASILDEAIDYLKSLQMQLQVM 312
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 95 (38.5 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 23 GD-DRDFKSKNLTAERRRREKLSNRLLTLRSLVPI--ITNMNKATIVEDAITYIEKLQMT 79
GD D K ++T ER RR++++ L LRSL+P + ++A+I+ + YI++LQ
Sbjct: 124 GDGDGAAKMSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQV 183
Query: 80 VKVL 83
++ L
Sbjct: 184 LRSL 187
Score = 49 (22.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 145 KFLEAMASHGFELSDTNVTTFKGATLISSCLNGVYSYKIEAEQVKELLQEI 195
K + A+ S E+ ++ T AT++S + ++ AE EL+QEI
Sbjct: 363 KIIAALESLSLEILHVSICTVDDATVLSFTIKIGIECELSAE---ELVQEI 410
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 5 GSASTQSCITQKRGRRVYGDDRD 27
G A T + T GRR G D +
Sbjct: 69 GGARTTTTTTAANGRRREGRDEE 91
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 32 NLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVL 83
NL+ ERRRR++++ +L L+ LVP +KA+I+++AI Y++ LQM V+++
Sbjct: 234 NLS-ERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 284
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 10 QSCITQK-RGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVED 68
QS I + R RR G D S AER RRE+++ R+ +L+ LVP + ++A ++++
Sbjct: 137 QSTIRPRVRARR--GQATDPHS---IAERLRRERIAERIRSLQELVPTVNKTDRAAMIDE 191
Query: 69 AITYIEKLQMTVKVLS 84
+ Y++ L++ VKVLS
Sbjct: 192 IVDYVKFLRLQVKVLS 207
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 111 (44.1 bits), Expect = 0.00017, P = 0.00017
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 5 GSASTQSCITQK-RGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKA 63
G A+ Q K R RR G D S AER RRE+++ R+ +L+ LVP +KA
Sbjct: 118 GGATAQPQTKPKVRARR--GQATDPHS---IAERLRRERIAERMKSLQELVPNGNKTDKA 172
Query: 64 TIVEDAITYIEKLQMTVKVLS 84
+++++ I Y++ LQ+ VKVLS
Sbjct: 173 SMLDEIIDYVKFLQLQVKVLS 193
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 113 (44.8 bits), Expect = 0.00023, P = 0.00023
Identities = 21/53 (39%), Positives = 39/53 (73%)
Query: 32 NLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLS 84
NL+ ERRRRE+++ R+ TL+ L+P +K +++ED I Y++ LQ+ ++++S
Sbjct: 363 NLS-ERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMS 414
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 25 DRDFKSKN-LTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVL 83
D+ KN + +ERRRREKL L L+S+VP I ++KA+I+ + I Y+++L+ V+ L
Sbjct: 237 DQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEEL 296
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 111 (44.1 bits), Expect = 0.00028, P = 0.00028
Identities = 31/106 (29%), Positives = 59/106 (55%)
Query: 27 DFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQ 86
D + +++ +ER+RREKL++ + L++++P + +KA+I+ A +I+ L+ + L ++
Sbjct: 180 DNQLQHMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSELEEK 239
Query: 87 LLEMXXXXXXXXRPRND--EINAAE---EMKKHGIEEKVEVTNVDG 127
E+ +ND E AAE E K+ + E +EVT G
Sbjct: 240 NRELEARLASRPAAKNDKGETAAAEAGDETKREDLVE-IEVTTTSG 284
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 110 (43.8 bits), Expect = 0.00031, P = 0.00031
Identities = 20/51 (39%), Positives = 37/51 (72%)
Query: 35 AERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSD 85
AERRRRE+++N L LRS++P T +KA+++ + I ++++L+ V+S+
Sbjct: 181 AERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISE 231
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 109 (43.4 bits), Expect = 0.00031, P = 0.00031
Identities = 25/81 (30%), Positives = 48/81 (59%)
Query: 8 STQSCITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVE 67
S +S + K + R R+RRE+++ RL L++LVP T ++ +T++E
Sbjct: 208 SQESPVAAKSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLE 267
Query: 68 DAITYIEKLQMTVKVLS-DQL 87
+A+ Y++ LQ+ +K+LS D++
Sbjct: 268 EAMHYVKFLQLQIKLLSSDEM 288
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 109 (43.4 bits), Expect = 0.00031, P = 0.00031
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 35 AERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLS 84
AER RRE+++ R+ L+ LVP + ++A ++++ + Y++ L++ VKVLS
Sbjct: 160 AERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLS 209
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 111 (44.1 bits), Expect = 0.00031, P = 0.00031
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 15 QKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIE 74
+ RG R + NL AERRRREK++ ++ TL+ L+P K + ++DAI Y++
Sbjct: 244 EARGSTSRKRSRTAEMHNL-AERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVK 302
Query: 75 KLQMTVKVLSDQLL 88
LQ ++ + ++
Sbjct: 303 SLQSQIQGMMSPMM 316
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 108 (43.1 bits), Expect = 0.00038, P = 0.00038
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 29 KSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLS 84
K A + RRE++S RL L+ LVP T ++ T++E AI+Y++ LQ+ VKVL+
Sbjct: 203 KDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLA 258
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 111 (44.1 bits), Expect = 0.00040, P = 0.00040
Identities = 20/59 (33%), Positives = 43/59 (72%)
Query: 26 RDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLS 84
R + NL+ ERRRR++++ ++ L+ L+P ++KA+++++AI Y++ LQ+ V+++S
Sbjct: 343 RSAEVHNLS-ERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMS 400
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 108 (43.1 bits), Expect = 0.00052, P = 0.00052
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 14 TQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYI 73
T+ R RR G D S AER RRE+++ R+ L+ LVP +KA+++++ I Y+
Sbjct: 136 TKIRARR--GQATDPHS---IAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYV 190
Query: 74 EKLQMTVKVLS 84
+ LQ+ VKVLS
Sbjct: 191 KFLQLQVKVLS 201
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 108 (43.1 bits), Expect = 0.00052, P = 0.00052
Identities = 22/54 (40%), Positives = 40/54 (74%)
Query: 37 RRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLSDQLLEM 90
R+RRE+++ RL L++LVP T ++ +T++E+A+ Y++ LQ+ +K+LS L M
Sbjct: 282 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWM 335
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 106 (42.4 bits), Expect = 0.00056, P = 0.00056
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 17 RGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNM-NKATIVEDAITYIEK 75
R RR G D S +L AER RREK+S R+ L+ LVP + KA+++++ I YI+
Sbjct: 129 RARR--GQATD--SHSL-AERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQS 183
Query: 76 LQMTVKVLSDQLLEM 90
LQ V+ + L+E+
Sbjct: 184 LQHQVEFMFKYLIEL 198
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 105 (42.0 bits), Expect = 0.00073, P = 0.00073
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 17 RGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVPIITNM-NKATIVEDAITYIEK 75
R RR G D S +L AER RREK+S R+ L+ LVP + KA+++++ I YI+
Sbjct: 137 RARR--GQATD--SHSL-AERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQA 191
Query: 76 LQMTVKVLSDQL 87
LQ V+ LS +L
Sbjct: 192 LQRQVEFLSMKL 203
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 106 (42.4 bits), Expect = 0.00074, P = 0.00074
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 29 KSKNLTAERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLS 84
K A + RRE++S RL L+ LVP T ++ T++E AI Y++ LQ+ VKVL+
Sbjct: 209 KDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLA 264
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 101 (40.6 bits), Expect = 0.00081, P = 0.00081
Identities = 17/49 (34%), Positives = 37/49 (75%)
Query: 35 AERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVL 83
+ERRRR++++ +L L+ L+P T +K +++++AI Y++ LQ+ +++L
Sbjct: 21 SERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 69
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 107 (42.7 bits), Expect = 0.00085, P = 0.00085
Identities = 19/50 (38%), Positives = 38/50 (76%)
Query: 35 AERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLS 84
+ER+RR+K++ R+ TL+ LVP + +KA+++++ I Y+++LQ V ++S
Sbjct: 221 SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 270
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 105 (42.0 bits), Expect = 0.00090, P = 0.00090
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 35 AERRRREKLSNRLLTLRSLVPIITNMNKATIVEDAITYIEKLQMTVKVLS 84
A + RRE++S RL L+ LVP T ++ T++E AI Y++ LQ+ VKVL+
Sbjct: 212 AAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLA 261
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 104 (41.7 bits), Expect = 0.00095, P = 0.00095
Identities = 36/111 (32%), Positives = 54/111 (48%)
Query: 13 ITQKRGRRVYGDDRDFKSKNLTAERRRREKLSNRLLTLRSLVP-IITNMNKATIVEDAIT 71
+ R RR G D S +L AER RR K++ RL L+ +VP M AT++++ I
Sbjct: 142 VVHVRARR--GQATD--SHSL-AERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIIN 196
Query: 72 YIEKLQMTVKVLSDQLLEMXXXXXXXXRPRNDEINAAEEMKKHGIEEKVEV 122
Y++ LQ V+ LS M N E +A + M++ E VE+
Sbjct: 197 YVQSLQNQVEFLS-----MKLTAASSFYDFNSETDAVDSMQRAKARETVEM 242
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.353 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 199 179 0.00089 109 3 11 22 0.44 32
31 0.39 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 79
No. of states in DFA: 566 (60 KB)
Total size of DFA: 129 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.93u 0.18s 16.11t Elapsed: 00:00:00
Total cpu time: 15.94u 0.18s 16.12t Elapsed: 00:00:00
Start: Fri May 10 18:20:44 2013 End: Fri May 10 18:20:44 2013