Query 042652
Match_columns 328
No_of_seqs 260 out of 2194
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 14:21:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042652.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042652hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rl5_A Metallophosphoesterase 99.9 3.2E-21 1.1E-25 179.3 19.4 206 31-264 42-279 (296)
2 2yvt_A Hypothetical protein AQ 99.8 5E-20 1.7E-24 166.7 17.5 185 50-258 4-236 (260)
3 3ib7_A ICC protein; metallopho 99.8 4.6E-20 1.6E-24 172.4 17.6 213 49-285 23-270 (330)
4 1uf3_A Hypothetical protein TT 99.8 6.8E-20 2.3E-24 162.0 16.5 178 50-258 4-204 (228)
5 3d03_A Phosphohydrolase; glyce 99.8 2.7E-19 9.1E-24 162.7 16.8 210 52-284 1-245 (274)
6 2nxf_A Putative dimetal phosph 99.7 3.9E-18 1.3E-22 157.8 10.3 208 50-285 4-305 (322)
7 1z2w_A Vacuolar protein sortin 99.7 8.2E-17 2.8E-21 140.4 15.8 154 50-282 9-166 (192)
8 2a22_A Vacuolar protein sortin 99.7 1.9E-16 6.5E-21 140.7 16.4 162 51-282 25-190 (215)
9 1s3l_A Hypothetical protein MJ 99.7 3.5E-16 1.2E-20 136.6 14.8 73 39-121 15-88 (190)
10 1xm7_A Hypothetical protein AQ 99.7 4.7E-16 1.6E-20 135.7 15.0 70 52-121 2-84 (195)
11 1nnw_A Hypothetical protein; s 99.7 1.1E-16 3.8E-21 144.6 10.6 71 51-121 1-76 (252)
12 3ck2_A Conserved uncharacteriz 99.7 3.4E-16 1.2E-20 134.5 12.7 146 50-282 5-151 (176)
13 2xmo_A LMO2642 protein; phosph 99.6 5.1E-15 1.8E-19 144.4 13.6 214 48-286 36-323 (443)
14 3qfm_A SAPH, putative uncharac 99.6 1.6E-15 5.5E-20 139.4 9.0 72 47-121 7-78 (270)
15 2kkn_A Uncharacterized protein 99.6 2E-14 6.7E-19 124.2 14.9 64 50-121 21-86 (178)
16 1su1_A Hypothetical protein YF 99.6 1.3E-14 4.4E-19 128.3 11.2 70 50-121 24-101 (208)
17 3rqz_A Metallophosphoesterase; 99.5 2.3E-15 8E-20 136.0 5.1 68 50-122 2-69 (246)
18 3av0_A DNA double-strand break 99.5 6.7E-15 2.3E-19 141.8 6.9 80 39-123 11-110 (386)
19 2q8u_A Exonuclease, putative; 99.4 3E-13 1E-17 127.6 10.9 74 49-122 16-110 (336)
20 3tgh_A Glideosome-associated p 99.4 1.6E-13 5.6E-18 130.1 6.5 214 50-284 2-284 (342)
21 1xzw_A Purple acid phosphatase 99.4 2.2E-12 7.7E-17 125.4 14.3 183 48-246 123-327 (426)
22 1ute_A Protein (II purple acid 99.4 1.3E-13 4.5E-18 126.8 3.8 73 50-122 5-96 (313)
23 2qfp_A Purple acid phosphatase 99.4 4.5E-12 1.5E-16 123.2 14.7 180 48-244 116-318 (424)
24 4fbk_A DNA repair and telomere 99.4 4.4E-13 1.5E-17 131.2 7.4 76 47-124 72-199 (472)
25 1ii7_A MRE11 nuclease; RAD50, 99.4 9.1E-13 3.1E-17 124.2 8.7 69 52-122 1-89 (333)
26 3tho_B Exonuclease, putative; 99.4 2.4E-12 8.3E-17 123.7 11.4 69 52-121 1-91 (379)
27 3t1i_A Double-strand break rep 99.3 1.2E-12 4.2E-17 127.4 7.4 75 47-123 28-154 (431)
28 4fbw_A DNA repair protein RAD3 99.3 6.2E-13 2.1E-17 129.0 5.3 75 48-124 10-136 (417)
29 1g5b_A Serine/threonine protei 99.3 3.4E-11 1.2E-15 106.7 12.2 69 50-121 11-79 (221)
30 1hp1_A 5'-nucleotidase; metall 98.8 6.3E-08 2.1E-12 96.4 15.3 73 50-123 7-97 (516)
31 2dfj_A Diadenosinetetraphospha 98.8 2.5E-09 8.5E-14 98.6 4.1 68 52-121 1-69 (280)
32 2qjc_A Diadenosine tetraphosph 98.8 2.5E-09 8.4E-14 97.6 3.6 66 52-121 19-85 (262)
33 3qfk_A Uncharacterized protein 98.7 6.6E-08 2.2E-12 96.6 13.0 71 50-123 18-115 (527)
34 2z72_A Protein-tyrosine-phosph 98.5 9.1E-08 3.1E-12 90.5 4.7 72 50-121 69-153 (342)
35 2ie4_C PP2A-alpha;, serine/thr 98.4 2.2E-07 7.6E-12 86.6 6.7 71 51-123 49-123 (309)
36 2z1a_A 5'-nucleotidase; metal- 98.4 1.1E-06 3.7E-11 88.3 12.0 71 50-123 28-121 (552)
37 3ive_A Nucleotidase; structura 98.4 2.2E-06 7.7E-11 85.1 14.1 71 50-123 5-99 (509)
38 1fjm_A Protein serine/threonin 98.4 3E-07 1E-11 86.5 6.3 69 51-121 56-128 (330)
39 3h63_A Serine/threonine-protei 98.3 7.4E-07 2.5E-11 83.2 7.7 71 50-121 58-132 (315)
40 2wdc_A SOXB, sulfur oxidation 98.3 5.6E-06 1.9E-10 83.3 14.5 40 81-122 123-168 (562)
41 1wao_1 Serine/threonine protei 98.3 7.1E-07 2.4E-11 87.7 6.8 70 50-121 211-285 (477)
42 3icf_A PPT, serine/threonine-p 98.3 1E-06 3.5E-11 82.8 7.2 70 50-121 62-136 (335)
43 3e7a_A PP-1A, serine/threonine 98.2 1.3E-06 4.4E-11 80.9 6.2 68 52-121 56-127 (299)
44 3ztv_A NAD nucleotidase, NADN; 98.2 1.2E-05 4.2E-10 81.1 13.8 69 51-122 12-107 (579)
45 3ll8_A Serine/threonine-protei 98.1 2.4E-06 8.2E-11 80.8 6.4 68 52-121 70-141 (357)
46 1aui_A Calcineurin, serine/thr 98.1 2.9E-06 1E-10 83.6 5.5 69 51-121 82-154 (521)
47 3c9f_A 5'-nucleotidase; 2',3'- 97.8 9.2E-05 3.2E-09 74.3 11.8 76 47-123 11-109 (557)
48 2yeq_A Apased, PHOD, alkaline 97.6 0.0034 1.2E-07 62.4 18.5 41 49-92 114-154 (527)
49 3e0j_A DNA polymerase subunit 97.5 0.00075 2.6E-08 66.0 12.1 133 29-165 175-353 (476)
50 1t71_A Phosphatase, conserved 97.4 0.00026 9E-09 64.8 7.5 72 50-123 3-77 (281)
51 2z06_A Putative uncharacterize 97.4 0.0015 5.2E-08 58.8 11.5 68 52-123 1-71 (252)
52 1t70_A Phosphatase; crystal, X 97.3 0.0015 5.2E-08 58.9 11.3 67 52-122 1-70 (255)
53 4h2g_A 5'-nucleotidase; dimer, 97.2 0.00026 8.8E-09 70.8 5.1 71 50-122 24-119 (546)
54 3jyf_A 2',3'-cyclic nucleotide 96.3 0.0084 2.9E-07 56.3 7.9 72 50-123 7-107 (339)
55 3gve_A YFKN protein; alpha-bet 96.3 0.0047 1.6E-07 58.0 6.0 71 51-123 11-114 (341)
56 4h1s_A 5'-nucleotidase; hydrol 94.8 0.027 9.3E-07 55.7 5.4 69 52-123 4-98 (530)
57 3flo_A DNA polymerase alpha su 93.6 0.18 6.2E-06 49.0 8.1 71 50-122 146-248 (460)
58 3w01_A Heptaprenylglyceryl pho 61.8 16 0.00053 32.1 6.3 52 69-122 27-78 (235)
59 3vzx_A Heptaprenylglyceryl pho 52.9 18 0.00063 31.5 5.2 51 70-122 23-73 (228)
60 3v7e_A Ribosome-associated pro 50.9 20 0.0007 25.7 4.4 48 69-120 18-65 (82)
61 3jyf_A 2',3'-cyclic nucleotide 40.9 16 0.00054 33.7 3.0 26 233-258 234-273 (339)
62 3gve_A YFKN protein; alpha-bet 38.1 19 0.00065 33.1 3.1 26 233-258 241-280 (341)
63 2lpm_A Two-component response 35.5 60 0.002 24.9 5.2 69 48-120 5-91 (123)
64 2qjc_A Diadenosine tetraphosph 35.5 14 0.00048 32.5 1.7 26 233-258 196-223 (262)
65 3cpq_A 50S ribosomal protein L 34.9 79 0.0027 23.8 5.8 41 70-114 29-69 (110)
66 2zay_A Response regulator rece 34.7 64 0.0022 24.2 5.4 67 49-119 6-93 (147)
67 2d00_A V-type ATP synthase sub 32.8 73 0.0025 24.1 5.2 68 50-121 2-86 (109)
68 2kqs_B Death domain-associated 32.1 26 0.00088 19.6 1.7 16 48-63 9-24 (26)
69 3iz5_f 60S ribosomal protein L 31.0 84 0.0029 23.9 5.3 47 69-119 33-79 (112)
70 3j21_Z 50S ribosomal protein L 30.8 1E+02 0.0035 22.5 5.7 48 69-120 22-70 (99)
71 3tb6_A Arabinose metabolism tr 30.3 68 0.0023 27.4 5.4 64 51-117 45-108 (298)
72 2xzm_U Ribosomal protein L7AE 28.7 60 0.0021 25.3 4.2 48 69-120 31-79 (126)
73 3aon_B V-type sodium ATPase su 28.4 75 0.0026 24.4 4.6 39 80-121 44-83 (115)
74 3d02_A Putative LACI-type tran 28.1 98 0.0034 26.5 6.0 60 51-115 34-93 (303)
75 3g1w_A Sugar ABC transporter; 27.8 93 0.0032 26.7 5.8 61 51-116 34-94 (305)
76 1w41_A 50S ribosomal protein L 27.7 1.1E+02 0.0039 22.4 5.5 41 69-114 23-64 (101)
77 3jy6_A Transcriptional regulat 26.9 1E+02 0.0035 26.1 5.9 56 51-115 37-92 (276)
78 3jyw_G 60S ribosomal protein L 26.7 73 0.0025 24.4 4.2 48 69-120 32-80 (113)
79 3v7q_A Probable ribosomal prot 26.6 92 0.0031 23.0 4.8 47 69-119 26-72 (101)
80 3on1_A BH2414 protein; structu 26.6 1E+02 0.0035 22.6 5.1 47 69-119 25-71 (101)
81 2lbw_A H/ACA ribonucleoprotein 25.8 92 0.0031 23.9 4.7 49 69-120 27-75 (121)
82 3md9_A Hemin-binding periplasm 25.0 1.3E+02 0.0045 25.4 6.2 35 77-116 56-90 (255)
83 3f6p_A Transcriptional regulat 23.2 1.7E+02 0.0057 21.0 5.8 46 70-119 38-84 (120)
84 3kht_A Response regulator; PSI 22.4 2.2E+02 0.0075 20.9 6.5 46 70-119 43-92 (144)
85 2ov6_A V-type ATP synthase sub 21.7 1E+02 0.0035 22.9 4.1 47 69-118 34-81 (101)
86 1rlg_A 50S ribosomal protein L 21.1 1.5E+02 0.0052 22.4 5.2 46 70-119 35-81 (119)
87 4a17_F RPL7A, 60S ribosomal pr 20.2 1.9E+02 0.0065 25.5 6.0 48 69-120 131-179 (255)
88 3gbv_A Putative LACI-family tr 20.1 1.9E+02 0.0064 24.5 6.3 60 54-118 45-104 (304)
No 1
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.87 E-value=3.2e-21 Score=179.27 Aligned_cols=206 Identities=18% Similarity=0.181 Sum_probs=133.6
Q ss_pred eeeeceeecCCcccCCCCCCCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCc--hhHHHHHHHHHhcC
Q 042652 31 TTRRPEILTSSAAASSTSASGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKY--DDFVLTMSLLKDRF 108 (328)
Q Consensus 31 ~v~~~~i~~~~~~~~~~~~~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~--~~~~~~~~~l~~~~ 108 (328)
.|+.+....+.+| +..++|||+++||+|...... ...++|+||++||+++.+ ++++.++++|+++.
T Consensus 42 ~~~~~~~~~~~~p---~~~~~mri~~iSD~H~~~~~l---------~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~ 109 (296)
T 3rl5_A 42 HVHMVDPIPYDTP---KPAGHTRFVCISDTRSRTDGI---------QMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLP 109 (296)
T ss_dssp TSEECCCCCTTSC---CCTTEEEEEEEBCCTTCCTTC---------CCCSCSEEEECSCCSSSCCHHHHHHHHHHHHTSC
T ss_pred ceeecccCCCCCC---CCCCCeEEEEEeeCCCCcchh---------ccCCCCEEEECCcccCCCCHHHHHHHHHHHHhCC
Confidence 3677777778888 778899999999999976531 235799999999999975 46788899999885
Q ss_pred -CcEEEECCCCCCCCCCCCCchhhHH-----------HHH--HH---HHh-cccccccccceEEEcCEEEeccCC--CC-
Q 042652 109 -QRVLFVPGNHDLWCRGEENDFPDSL-----------EKL--NK---LLD-ACRGLGVEINPVVIDGLGIIPLFS--WY- 167 (328)
Q Consensus 109 -~~v~~V~GNHD~~~~~~~~~~~~~~-----------~~~--~~---l~~-~~~~l~v~~~~~~i~g~~iiG~~~--w~- 167 (328)
.++++|+||||++.... +.+.+ .+. .. ... ......++++.++++|++|.|... ++
T Consensus 110 ~~~v~~V~GNHD~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~ 186 (296)
T 3rl5_A 110 YEYKIVIAGNHELTFDKE---FMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFN 186 (296)
T ss_dssp CSEEEECCCTTCGGGCHH---HHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--
T ss_pred CCeEEEEcCCcccccchh---hhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCC
Confidence 56999999999975421 11110 000 00 000 011235678889999999999543 11
Q ss_pred CCCCCCcc--c-ccCCc-cC--CcceeeecccCcccccccccccCCCCCCCCCCcHHHHHHHH-HhhcccCCCccEEEEc
Q 042652 168 HESFDREK--D-ISGIR-IL--PLEMVIHFLFSLQDLCPEKRMLFYPNLPKIIGSDFLELRIR-SIHGAMGSTSACHVFG 240 (328)
Q Consensus 168 ~~~f~~e~--~-i~~~~-~~--~~~lv~H~p~P~~~~~~~~~~~~~~~~~~~~gs~~l~~~l~-~~~~~~~~~v~~~i~G 240 (328)
...|..+. . ...+. .+ ...+++|.| |........ .-....|++.+.+.++ +.. +++++||
T Consensus 187 ~~~f~~~~~~~~~~~~~~ip~~~dILvTH~P-P~g~~D~~~------~~~~~~G~~~L~~~i~~~~~------p~l~v~G 253 (296)
T 3rl5_A 187 GWGFNLPRGQSLLDKWNLIPEGTDILMTHGP-PLGFRDWVP------KELQRVGCVELLNTVQRRVR------PKLHVFG 253 (296)
T ss_dssp CCTTBCCTTHHHHHHHTTSCTTCSEEEESSC-BTTSSCEEG------GGTEECSBHHHHHHHHHTTC------CSEEEEC
T ss_pred CcCCCcchHHHHHHHHhhCCCCCeEEEECCC-ccccccccc------cccCcCChHHHHHHHHHhcC------CCEEEEC
Confidence 12232211 0 01111 11 234889999 986422110 0133679999988884 554 5699999
Q ss_pred ccccCCce-EECCEEEEec-cccChh
Q 042652 241 HTHFSWDA-VLDGIRYVQA-PLAYPR 264 (328)
Q Consensus 241 H~H~~~~~-~~~g~~~v~~-~~gy~~ 264 (328)
|+|.+... .++++.++|+ +.+.+.
T Consensus 254 H~H~~~~~~~~g~t~vvNpGs~~~~~ 279 (296)
T 3rl5_A 254 GIHEGYGTMTDGYTTYINASTCTVSF 279 (296)
T ss_dssp SCGGGCEEEECSSCEEEECBCSCTTS
T ss_pred CccCCCceEEECCEEEEECCcCCcCc
Confidence 99999875 4688899887 445544
No 2
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.84 E-value=5e-20 Score=166.75 Aligned_cols=185 Identities=13% Similarity=0.137 Sum_probs=114.3
Q ss_pred CCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchh-----------------------------HHHH
Q 042652 50 SGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDD-----------------------------FVLT 100 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~-----------------------------~~~~ 100 (328)
++|||+++||+|++.....++++.+ +..++|+||++||+++.... +..+
T Consensus 4 ~~mri~~iSDlH~~~~~~~~~l~~~--~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 81 (260)
T 2yvt_A 4 MPRKVLAIKNFKERFDLLPKLKGVI--AEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKF 81 (260)
T ss_dssp CCCEEEEEECCTTCGGGHHHHHHHH--HHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeecCCChHHHHHHHHHH--HhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHH
Confidence 4699999999999887656667666 34689999999999997632 3445
Q ss_pred HHHHHhcCCcEEEECCCCCCCCCCCCCchhhHHHHHHHHHhcc--c-ccccccce-EEEcCEEEeccCCCCCC-CCCCcc
Q 042652 101 MSLLKDRFQRVLFVPGNHDLWCRGEENDFPDSLEKLNKLLDAC--R-GLGVEINP-VVIDGLGIIPLFSWYHE-SFDREK 175 (328)
Q Consensus 101 ~~~l~~~~~~v~~V~GNHD~~~~~~~~~~~~~~~~~~~l~~~~--~-~l~v~~~~-~~i~g~~iiG~~~w~~~-~f~~e~ 175 (328)
++.|++...|+++|+||||.+.. ..+. ..+.... . ...+++.. ++++|++|+|+++.... .+..+.
T Consensus 82 l~~l~~~~~pv~~v~GNHD~~~~-------~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 152 (260)
T 2yvt_A 82 FREIGELGVKTFVVPGKNDAPLK-------IFLR--AAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDF 152 (260)
T ss_dssp HHHHHTTCSEEEEECCTTSCCHH-------HHHH--HHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSSS
T ss_pred HHHHHhcCCcEEEEcCCCCchhh-------hhHH--HHhhhccCCcceEEecCcceEEECCEEEEecCCCcCCCCcCHHH
Confidence 56666657899999999998631 1111 1111110 0 01233445 77899999998643211 111110
Q ss_pred -----------cccCCc---cCCcceeeecccCcccccccccccCCCCCCCCCCcHHHHHHHHHhhcccCCCccEEEEcc
Q 042652 176 -----------DISGIR---ILPLEMVIHFLFSLQDLCPEKRMLFYPNLPKIIGSDFLELRIRSIHGAMGSTSACHVFGH 241 (328)
Q Consensus 176 -----------~i~~~~---~~~~~lv~H~p~P~~~~~~~~~~~~~~~~~~~~gs~~l~~~l~~~~~~~~~~v~~~i~GH 241 (328)
.+.... -....+++|+| |.....+.. +......|+..+.+.+++.. +++++|||
T Consensus 153 ~~~~~~~~~~~~l~~l~~~~~~~~Il~~H~p-p~~~~~d~~-----~~~~~~~~~~~l~~~~~~~~------~~~vl~GH 220 (260)
T 2yvt_A 153 VLKYPRWYVEYILKFVNELKPRRLVTIFYTP-PIGEFVDRT-----PEDPKHHGSAVVNTIIKSLN------PEVAIVGH 220 (260)
T ss_dssp SCEEEHHHHHHHGGGGGGSCCCEEEEEESSC-CSCSSTTCB-----TTBSCCCSCHHHHHHHHHHC------CSEEEECS
T ss_pred HhhcchhhHHHHHHHHHhcCCCCEEEEECCC-ccccccccC-----cccccccCcHHHHHHHHHhC------CCEEEECC
Confidence 010000 11234789999 874322110 01123568888888887763 67999999
Q ss_pred cccCCceEECCEEEEec
Q 042652 242 THFSWDAVLDGIRYVQA 258 (328)
Q Consensus 242 ~H~~~~~~~~g~~~v~~ 258 (328)
+| .....++++.++++
T Consensus 221 ~H-~~~~~~~~~~~in~ 236 (260)
T 2yvt_A 221 VG-KGHELVGNTIVVNP 236 (260)
T ss_dssp SC-CEEEEETTEEEEEC
T ss_pred cc-CCcEEeCCEEEEeC
Confidence 99 54556788877665
No 3
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.84 E-value=4.6e-20 Score=172.36 Aligned_cols=213 Identities=20% Similarity=0.228 Sum_probs=129.1
Q ss_pred CCCcEEEEEeCCCCCCcc------------cHHHHHHHhhcCCCCCEEEEcccccCCc--hhHHHHHHHHHh----cCCc
Q 042652 49 ASGLRVFVLSDLHTDYSE------------NMTWVKCLSTTRHKKDVLLVAGDVAEKY--DDFVLTMSLLKD----RFQR 110 (328)
Q Consensus 49 ~~~~ri~~iSDlH~~~~~------------~~~~l~~l~~~~~~~D~li~~GDi~~~~--~~~~~~~~~l~~----~~~~ 110 (328)
...|||+++||+|++... ..++++.+.....++|+||++||+++.+ ..+..+.+.++. ...|
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~p 102 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAE 102 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCC
Confidence 357999999999985321 1234555532237899999999999875 344455555543 3789
Q ss_pred EEEECCCCCCCCCCCCCchhhHHHHHHHHHhcccccccccceEEEcCEEEeccCCCCCC----CCCCc------ccccCC
Q 042652 111 VLFVPGNHDLWCRGEENDFPDSLEKLNKLLDACRGLGVEINPVVIDGLGIIPLFSWYHE----SFDRE------KDISGI 180 (328)
Q Consensus 111 v~~V~GNHD~~~~~~~~~~~~~~~~~~~l~~~~~~l~v~~~~~~i~g~~iiG~~~w~~~----~f~~e------~~i~~~ 180 (328)
+++|+||||+.. .+. ..+.......+.....+.++|++|+++++-... .+..+ ..+...
T Consensus 103 v~~v~GNHD~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~~~ 171 (330)
T 3ib7_A 103 LVWVMGNHDDRA---------ELR--KFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATP 171 (330)
T ss_dssp EEECCCTTSCHH---------HHH--HHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHTTSC
T ss_pred EEEeCCCCCCHH---------HHH--HHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHHHhc
Confidence 999999999742 111 111111111222234678899999998763211 11110 111111
Q ss_pred ccCCcceeeecccCcccccccccccCCCCCCCCCCcHHHHHHHHHhhcccCCCccEEEEcccccCCceEECCEEEEec-c
Q 042652 181 RILPLEMVIHFLFSLQDLCPEKRMLFYPNLPKIIGSDFLELRIRSIHGAMGSTSACHVFGHTHFSWDAVLDGIRYVQA-P 259 (328)
Q Consensus 181 ~~~~~~lv~H~p~P~~~~~~~~~~~~~~~~~~~~gs~~l~~~l~~~~~~~~~~v~~~i~GH~H~~~~~~~~g~~~v~~-~ 259 (328)
......+++||+ |......... .....+.+.+.+.+++. ++++++|||+|.......+|+.++++ +
T Consensus 172 ~~~~~iv~~Hh~-p~~~~~~~~~------~~~~~~~~~l~~~l~~~------~v~~v~~GH~H~~~~~~~~g~~~~~~gs 238 (330)
T 3ib7_A 172 APDGTILALHHP-PIPSVLDMAV------TVELRDQAALGRVLRGT------DVRAILAGHLHYSTNATFVGIPVSVASA 238 (330)
T ss_dssp CTTCEEEECSSC-SSCCSSGGGG------GGSBSCHHHHHHHHTTS------SEEEEEECSSSSCEEEEETTEEEEECCC
T ss_pred ccCCeEEEEECC-CCCCCccccc------cccccCHHHHHHHHhcc------CceEEEECCCCCcccceECCEEEEecCc
Confidence 112245889999 8754332211 01234556565555543 58899999999999999999999876 4
Q ss_pred ccChhhh------hcccCCCCCCcceEEecCC
Q 042652 260 LAYPRER------KRRMNGGENQLPYCVYSDG 285 (328)
Q Consensus 260 ~gy~~~~------~~~~~~~~g~~~~~l~~dg 285 (328)
.+++... .+.....+||+.+.+.+++
T Consensus 239 ~~~~~~~~~~~g~~~~~~~~~gy~iv~i~~~~ 270 (330)
T 3ib7_A 239 TCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDT 270 (330)
T ss_dssp SSCEECTTSCTTCCCEESCSCEEEEEEECSSC
T ss_pred ceeccCCCCCCcceeccCCCCceEEEEEECCC
Confidence 5654321 1122335689999998776
No 4
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.83 E-value=6.8e-20 Score=161.99 Aligned_cols=178 Identities=13% Similarity=0.111 Sum_probs=113.3
Q ss_pred CCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCc---hhHHHHHHHHHhcCCcEEEECCCCCCCCCCCC
Q 042652 50 SGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKY---DDFVLTMSLLKDRFQRVLFVPGNHDLWCRGEE 126 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~---~~~~~~~~~l~~~~~~v~~V~GNHD~~~~~~~ 126 (328)
.+|||+++||+|++....+++++.+ +..++|+||++||+++.. +.+..+++.|++...|+++|+||||.+..
T Consensus 4 ~~mri~~iSD~H~~~~~~~~~~~~~--~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GNHD~~~~--- 78 (228)
T 1uf3_A 4 TVRYILATSNPMGDLEALEKFVKLA--PDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIW--- 78 (228)
T ss_dssp CCCEEEEEECCTTCHHHHHHHHTHH--HHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHH---
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHH--hhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEECCCCCchhH---
Confidence 4689999999999876545555555 334799999999999875 34556778888778899999999998631
Q ss_pred CchhhHHHHH-H-HHHhcccccccccceEEEc-CEEEeccCCCCCC--CCCCcccc---------------cCCccCCcc
Q 042652 127 NDFPDSLEKL-N-KLLDACRGLGVEINPVVID-GLGIIPLFSWYHE--SFDREKDI---------------SGIRILPLE 186 (328)
Q Consensus 127 ~~~~~~~~~~-~-~l~~~~~~l~v~~~~~~i~-g~~iiG~~~w~~~--~f~~e~~i---------------~~~~~~~~~ 186 (328)
+.+.+. . .+. ......+.+..+.++ ++.|+|+++.... .+.. ..+ .........
T Consensus 79 ----~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~i 152 (228)
T 1uf3_A 79 ----EYLREAANVELV-HPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEE-HEALRYPAWVAEYRLKALWELKDYPKI 152 (228)
T ss_dssp ----HHHHHHHHHHHH-CTTEEECBTSEEEETTTEEEEEECSEEESSSCCBS-SSSCEEEHHHHHHHHGGGGGSCSCCEE
T ss_pred ----HHHHhhhhhhcc-CcceEEcccceEeeCCCcEEecCCCCcCCCCccCh-hhcccchhhhHHHHHHHHHhCCCCCeE
Confidence 111111 0 000 001123445667777 8999998753211 1111 111 111111345
Q ss_pred eeeecccCcccccccccccCCCCCCCCCCcHHHHHHHHHhhcccCCCccEEEEcccccCCceEECCEEEEec
Q 042652 187 MVIHFLFSLQDLCPEKRMLFYPNLPKIIGSDFLELRIRSIHGAMGSTSACHVFGHTHFSWDAVLDGIRYVQA 258 (328)
Q Consensus 187 lv~H~p~P~~~~~~~~~~~~~~~~~~~~gs~~l~~~l~~~~~~~~~~v~~~i~GH~H~~~~~~~~g~~~v~~ 258 (328)
+++|+| |... . ....|++.+.+.+++. ++++++|||+| ......+++.++++
T Consensus 153 l~~H~p-~~~~--~----------~~~~~~~~~~~~~~~~------~~~~~~~GH~H-~~~~~~~~~~~in~ 204 (228)
T 1uf3_A 153 FLFHTM-PYHK--G----------LNEQGSHEVAHLIKTH------NPLLVLVAGKG-QKHEMLGASWVVVP 204 (228)
T ss_dssp EEESSC-BCBT--T----------TBTTSBHHHHHHHHHH------CCSEEEECCSS-CEEEEETTEEEEEC
T ss_pred EEEccC-cccC--C----------ccccCHHHHHHHHHHh------CCCEEEEcccc-cCccccCCceEEEe
Confidence 789999 8642 0 2245788777777765 37799999999 44456788887765
No 5
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.82 E-value=2.7e-19 Score=162.66 Aligned_cols=210 Identities=15% Similarity=0.056 Sum_probs=125.5
Q ss_pred cEEEEEeCCCCCCc------------ccHHHHHHHhhcCCCCCEEEEcccccCCc--hhHHHHHHHHHhcCCcEEEECCC
Q 042652 52 LRVFVLSDLHTDYS------------ENMTWVKCLSTTRHKKDVLLVAGDVAEKY--DDFVLTMSLLKDRFQRVLFVPGN 117 (328)
Q Consensus 52 ~ri~~iSDlH~~~~------------~~~~~l~~l~~~~~~~D~li~~GDi~~~~--~~~~~~~~~l~~~~~~v~~V~GN 117 (328)
|||+++||+|++.. ..+++++.+.....++|+||++||+++.. ..+..+.+.++++..|+++|+||
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~p~~~v~GN 80 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGN 80 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCT
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 79999999999752 11234555532234789999999999875 35667788888888899999999
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHhcc---ccc-ccccceEEEcCEEEeccCCCCCCC----CCCc------ccccCCccC
Q 042652 118 HDLWCRGEENDFPDSLEKLNKLLDAC---RGL-GVEINPVVIDGLGIIPLFSWYHES----FDRE------KDISGIRIL 183 (328)
Q Consensus 118 HD~~~~~~~~~~~~~~~~~~~l~~~~---~~l-~v~~~~~~i~g~~iiG~~~w~~~~----f~~e------~~i~~~~~~ 183 (328)
||+... +. ..+.... ..- +.....+..++++|+++++..... +..+ +.+....-.
T Consensus 81 HD~~~~---------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~~~~~ 149 (274)
T 3d03_A 81 HDDKAL---------FL--EYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDK 149 (274)
T ss_dssp TSCHHH---------HH--HHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHTTS
T ss_pred CCCHHH---------HH--HHhhhhhcCcccCCCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHhCCCC
Confidence 998521 11 1111110 000 111234556899999997643211 1100 000000112
Q ss_pred CcceeeecccCcccccccccccCCCCCCCCCCcHHHHHHHHHhhcccCCCccEEEEcccccCCceEECCEEEEecc-ccC
Q 042652 184 PLEMVIHFLFSLQDLCPEKRMLFYPNLPKIIGSDFLELRIRSIHGAMGSTSACHVFGHTHFSWDAVLDGIRYVQAP-LAY 262 (328)
Q Consensus 184 ~~~lv~H~p~P~~~~~~~~~~~~~~~~~~~~gs~~l~~~l~~~~~~~~~~v~~~i~GH~H~~~~~~~~g~~~v~~~-~gy 262 (328)
...+++|+| |......... .....+...+.+.++++. ++++++|||+|.......+|+.++.+| .+.
T Consensus 150 ~~iv~~H~p-~~~~~~~~~~------~~~~~~~~~l~~~l~~~~-----~v~~vl~GH~H~~~~~~~~g~~~~~~pg~~~ 217 (274)
T 3d03_A 150 PATIFMHHP-PLPLGNAQMD------PIACENGHRLLALVERFP-----SLTRIFCGHNHSLTMTQYRQALISTLPGTVH 217 (274)
T ss_dssp CEEEEESSC-SSCCSCTTTG------GGSBTTTHHHHHHHHHCT-----TEEEEEECSSSSCEEEEETTEEEEECCCSSC
T ss_pred CEEEEECCC-CcccCCcccC------cccCcCHHHHHHHHHhCC-----CceEEEeCCCCCchhheECCEEEEEcCCcce
Confidence 345889999 8653221100 011335666777776652 478999999999998889998776654 333
Q ss_pred hhh-h-----hcccCCCCCCcceEEecC
Q 042652 263 PRE-R-----KRRMNGGENQLPYCVYSD 284 (328)
Q Consensus 263 ~~~-~-----~~~~~~~~g~~~~~l~~d 284 (328)
... . .......+||+.+.+.++
T Consensus 218 ~~~~~~~~~~~~~~~~~~gy~i~~i~~~ 245 (274)
T 3d03_A 218 QVPYCHADTDPYYDLSPASCLMHRQVGE 245 (274)
T ss_dssp BCCCCSSCCSCEEBCCCCEEEEEEEETT
T ss_pred eeccCCCccccccccCCCceEEEEEeCC
Confidence 211 0 011233679999888766
No 6
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.74 E-value=3.9e-18 Score=157.77 Aligned_cols=208 Identities=14% Similarity=0.091 Sum_probs=122.7
Q ss_pred CCcEEEEEeCCCCCCcc-------------------cHHHHHHHhhcCCCCCEEEEcccccCCch--------hHHHHHH
Q 042652 50 SGLRVFVLSDLHTDYSE-------------------NMTWVKCLSTTRHKKDVLLVAGDVAEKYD--------DFVLTMS 102 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~-------------------~~~~l~~l~~~~~~~D~li~~GDi~~~~~--------~~~~~~~ 102 (328)
..|||+++||+|++... ..+.++.+ +..++|+||++||+++... .+..+.+
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~ 81 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQW--RRERVQCVVQLGDIIDGHNRRRDASDRALDTVMA 81 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHH--HHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHH--HhcCCCEEEECCCccCCCCCcchHHHHHHHHHHH
Confidence 46999999999997621 11233333 3478999999999998752 3456777
Q ss_pred HHHhcCCcEEEECCCCCCCCCCCCCchhhHHHHHHHHHhc-----------ccccccccceEEE-cCEEEeccCCCCCCC
Q 042652 103 LLKDRFQRVLFVPGNHDLWCRGEENDFPDSLEKLNKLLDA-----------CRGLGVEINPVVI-DGLGIIPLFSWYHES 170 (328)
Q Consensus 103 ~l~~~~~~v~~V~GNHD~~~~~~~~~~~~~~~~~~~l~~~-----------~~~l~v~~~~~~i-~g~~iiG~~~w~~~~ 170 (328)
.+++...|+++|+||||.+.... ..+. ..+... ....+.....+.. ++++++++++..-..
T Consensus 82 ~l~~~~~p~~~v~GNHD~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ld~~~~~~ 154 (322)
T 2nxf_A 82 ELDACSVDVHHVWGNHEFYNFSR-----PSLL--SSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSV 154 (322)
T ss_dssp HHHTTCSEEEECCCHHHHHHCCH-----HHHH--TSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCS
T ss_pred HHHhcCCcEEEecCCCCcccCCH-----HHHh--hhhCCcccccccccccccCCCCceEEEEecCCCEEEEEEcCceecc
Confidence 77777789999999999853210 1110 000000 0000111234555 889999887632000
Q ss_pred C-----------------------C----Cc-------------ccccC--Ccc------------CCcceeeecccCcc
Q 042652 171 F-----------------------D----RE-------------KDISG--IRI------------LPLEMVIHFLFSLQ 196 (328)
Q Consensus 171 f-----------------------~----~e-------------~~i~~--~~~------------~~~~lv~H~p~P~~ 196 (328)
+ . +. +.+.. ..| .+..+++|+| |..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~~~~iv~~H~p-~~~ 233 (322)
T 2nxf_A 155 IGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLP-VHP 233 (322)
T ss_dssp SSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSC-CCT
T ss_pred cccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcCCcEEEEEccC-CCC
Confidence 0 0 00 00100 001 1224788999 875
Q ss_pred cccccccccCCCCCCCCCCcHHHHHHHHHhhcccCCCccEEEEcccccCCceE-ECCEEEEeccccChhhhhcccCCCCC
Q 042652 197 DLCPEKRMLFYPNLPKIIGSDFLELRIRSIHGAMGSTSACHVFGHTHFSWDAV-LDGIRYVQAPLAYPRERKRRMNGGEN 275 (328)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~gs~~l~~~l~~~~~~~~~~v~~~i~GH~H~~~~~~-~~g~~~v~~~~gy~~~~~~~~~~~~g 275 (328)
...... ....+.+.+.++++++. ++++++|||+|...... .+|+.+++++..... ....+|
T Consensus 234 ~~~~~~--------~~~~~~~~~~~ll~~~~-----~v~~~~~GH~H~~~~~~~~~g~~~i~~~~~~~~-----~~~~~~ 295 (322)
T 2nxf_A 234 CAADPI--------CLAWNHEAVLSVLRSHQ-----SVLCFIAGHDHDGGRCTDSSGAQHITLEGVIET-----PPHSHA 295 (322)
T ss_dssp TSSCGG--------GSCTTHHHHHHHHHTCT-----TEEEEEECSCTTCEEEECTTSCEEEECCCGGGC-----CTTSCE
T ss_pred CCCCcc--------ccccCHHHHHHHHhcCC-----CeEEEEcCCcCCCCceeccCCceEEEecchhhC-----CCCCCc
Confidence 432110 11225666666666542 47899999999999887 899999887644211 123568
Q ss_pred CcceEEecCC
Q 042652 276 QLPYCVYSDG 285 (328)
Q Consensus 276 ~~~~~l~~dg 285 (328)
|..+.+++++
T Consensus 296 y~~v~~~~~~ 305 (322)
T 2nxf_A 296 FATAYLYEDR 305 (322)
T ss_dssp EEEEEECSSE
T ss_pred EEEEEEECCe
Confidence 9888887654
No 7
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.73 E-value=8.2e-17 Score=140.37 Aligned_cols=154 Identities=20% Similarity=0.111 Sum_probs=98.6
Q ss_pred CCcEEEEEeCCCCCCc--cc-HHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCCCCCCCC
Q 042652 50 SGLRVFVLSDLHTDYS--EN-MTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLWCRGEE 126 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~--~~-~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~~~~~~ 126 (328)
++|||+++||+|++.. .. ..+.+.+ +..++|+|+++||+++ ..+++.|++...|+++|+||||....-
T Consensus 9 ~mm~i~~iSD~H~~~~~~~~~~~l~~~~--~~~~~d~ii~~GDl~~-----~~~~~~l~~~~~~~~~v~GNhD~~~~l-- 79 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCNSLPAKFKKLL--VPGKIQHILCTGNLCT-----KESYDYLKTLAGDVHIVRGDFDENLNY-- 79 (192)
T ss_dssp --CEEEEECCCCBTTTCSSCCHHHHTTC--CTTSCSEEEECSCCBS-----HHHHHHHHHHCSEEEECCCTTCCCTTS--
T ss_pred cceEEEEEecCCCCccchhHHHHHHHHh--ccCCCCEEEEcCCCCC-----HHHHHHHHhcCCCEEEEcCCcCccccC--
Confidence 4699999999998642 22 2333323 3467999999999986 346677777777999999999986410
Q ss_pred CchhhHHHHHHHHHhcccccccccceEEEcCEEEeccCCCCCCCCCCcccccCCccCCcceeeecccCcccccccccccC
Q 042652 127 NDFPDSLEKLNKLLDACRGLGVEINPVVIDGLGIIPLFSWYHESFDREKDISGIRILPLEMVIHFLFSLQDLCPEKRMLF 206 (328)
Q Consensus 127 ~~~~~~~~~~~~l~~~~~~l~v~~~~~~i~g~~iiG~~~w~~~~f~~e~~i~~~~~~~~~lv~H~p~P~~~~~~~~~~~~ 206 (328)
. ....++++|.+| +++|.. |..
T Consensus 80 ----------------p-----~~~~~~~~~~~i--------------------------~l~Hg~-~~~---------- 101 (192)
T 1z2w_A 80 ----------------P-----EQKVVTVGQFKI--------------------------GLIHGH-QVI---------- 101 (192)
T ss_dssp ----------------C-----SEEEEEETTEEE--------------------------EEECSC-CCC----------
T ss_pred ----------------C-----cceEEEECCEEE--------------------------EEECCC-cCC----------
Confidence 0 012234455544 566766 531
Q ss_pred CCCCCCCCCcHHHHHHHHHhhcccCCCccEEEEcccccCCceEECCEEEEec-cccChhhhhcccCCCCCCcceEEe
Q 042652 207 YPNLPKIIGSDFLELRIRSIHGAMGSTSACHVFGHTHFSWDAVLDGIRYVQA-PLAYPRERKRRMNGGENQLPYCVY 282 (328)
Q Consensus 207 ~~~~~~~~gs~~l~~~l~~~~~~~~~~v~~~i~GH~H~~~~~~~~g~~~v~~-~~gy~~~~~~~~~~~~g~~~~~l~ 282 (328)
...+.+.+.+.+++. ++++++|||+|.+.....+|+.++++ +.+.++. .++....++|..+.+.
T Consensus 102 -----~~~~~~~l~~~~~~~------~~d~vi~GHtH~~~~~~~~~~~~inpGS~~~~~~-~~~~~~~~~y~il~~~ 166 (192)
T 1z2w_A 102 -----PWGDMASLALLQRQF------DVDILISGHTHKFEAFEHENKFYINPGSATGAYN-ALETNIIPSFVLMDIQ 166 (192)
T ss_dssp -----BTTCHHHHHHHHHHH------SSSEEECCSSCCCEEEEETTEEEEECCCTTCCCC-SSCSCCCCEEEEEEEE
T ss_pred -----CCCCHHHHHHHHHhc------CCCEEEECCcCcCccEeECCEEEEECCcccccCC-CCCcCCCCcEEEEEEE
Confidence 012344455544443 47899999999999888899999886 4555432 1111224677777765
No 8
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.71 E-value=1.9e-16 Score=140.68 Aligned_cols=162 Identities=18% Similarity=0.148 Sum_probs=99.6
Q ss_pred CcEEEEEeCCCCCCcc--c-HHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCCCCCCCCC
Q 042652 51 GLRVFVLSDLHTDYSE--N-MTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLWCRGEEN 127 (328)
Q Consensus 51 ~~ri~~iSDlH~~~~~--~-~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~~~~~~~ 127 (328)
+|||+++||+|++... . ..+.+.+ +..++|.|+++||+++ ..+++.|+++..|+++|+||||.......
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~--~~~~~D~vi~~GDl~~-----~~~l~~l~~~~~~v~~V~GNHD~~~~~~~- 96 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELL--ATDKINYVLCTGNVCS-----QEYVEMLKNITKNVYIVSGDLDSAIFNPD- 96 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHH--HCTTCCEEEECSCCCC-----HHHHHHHHHHCSCEEECCCTTCCSCCBCC-
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHH--hcCCCCEEEECCCCCC-----HHHHHHHHHcCCCEEEecCCCcCcccccC-
Confidence 5899999999997532 1 2233333 3568999999999996 35677787777799999999998753210
Q ss_pred chhhHHHHHHHHHhcccccccccceEEEcCEEEeccCCCCCCCCCCcccccCCccCCcceeeecccCcccccccccccCC
Q 042652 128 DFPDSLEKLNKLLDACRGLGVEINPVVIDGLGIIPLFSWYHESFDREKDISGIRILPLEMVIHFLFSLQDLCPEKRMLFY 207 (328)
Q Consensus 128 ~~~~~~~~~~~l~~~~~~l~v~~~~~~i~g~~iiG~~~w~~~~f~~e~~i~~~~~~~~~lv~H~p~P~~~~~~~~~~~~~ 207 (328)
. .....+. ....++++|.+ .+++|.. |..
T Consensus 97 ---~---------~~~~~lp-~~~~~~~~~~~--------------------------i~l~Hg~-~~~----------- 125 (215)
T 2a22_A 97 ---P---------ESNGVFP-EYVVVQIGEFK--------------------------IGLMHGN-QVL----------- 125 (215)
T ss_dssp ---G---------GGTBCCC-SEEEEEETTEE--------------------------EEEECST-TSS-----------
T ss_pred ---h---------hhHhhCC-ceEEEecCCeE--------------------------EEEEcCC-ccC-----------
Confidence 0 0000000 00111222222 2677876 541
Q ss_pred CCCCCCCCcHHHHHHHHHhhcccCCCccEEEEcccccCCceEECCEEEEec-cccChhhhhcccCCCCCCcceEEe
Q 042652 208 PNLPKIIGSDFLELRIRSIHGAMGSTSACHVFGHTHFSWDAVLDGIRYVQA-PLAYPRERKRRMNGGENQLPYCVY 282 (328)
Q Consensus 208 ~~~~~~~gs~~l~~~l~~~~~~~~~~v~~~i~GH~H~~~~~~~~g~~~v~~-~~gy~~~~~~~~~~~~g~~~~~l~ 282 (328)
...+.+.+.+.+++. ++++++|||+|.+.....+|+.++++ +++.++. .++....++|..+.+.
T Consensus 126 ----~~~~~~~l~~~~~~~------~~d~vl~GHtH~~~~~~~~~~~~inpGS~~~~~~-~~~~~~~~~y~il~i~ 190 (215)
T 2a22_A 126 ----PWDDPGSLEQWQRRL------DCDILVTGHTHKLRVFEKNGKLFLNPGTATGAFS-ALTPDAPPSFMLMALQ 190 (215)
T ss_dssp ----STTCHHHHHHHHHHH------TCSEEEECSSCCCEEEEETTEEEEECCCSSCCCC-TTSTTCCCEEEEEEEE
T ss_pred ----CCCCHHHHHHHHhhc------CCCEEEECCcCCCccEeeCCEEEEECCcccccCC-CCCCCCCCcEEEEEEe
Confidence 122445555555443 47899999999998888899999887 4555432 1111224567776665
No 9
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.69 E-value=3.5e-16 Score=136.55 Aligned_cols=73 Identities=12% Similarity=0.226 Sum_probs=50.3
Q ss_pred cCCcccCCCCCCC-cEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCC
Q 042652 39 TSSAAASSTSASG-LRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGN 117 (328)
Q Consensus 39 ~~~~~~~~~~~~~-~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GN 117 (328)
++.+| ++.++ |||+++||+|......+++++.+ +..++|+|+++||+++. ..++.++++..|+++|+||
T Consensus 15 ~~~~~---~~~~g~m~i~~iSD~Hg~~~~l~~~l~~~--~~~~~D~ii~~GDl~~~-----~~~~~l~~l~~~~~~V~GN 84 (190)
T 1s3l_A 15 PTTEN---LYFQGHMKIGIMSDTHDHLPNIRKAIEIF--NDENVETVIHCGDFVSL-----FVIKEFENLNANIIATYGN 84 (190)
T ss_dssp --------------CEEEEECCCTTCHHHHHHHHHHH--HHSCCSEEEECSCCCST-----HHHHHGGGCSSEEEEECCT
T ss_pred CcccC---hhhcCCeEEEEEeeCCCCHHHHHHHHHHH--hhcCCCEEEECCCCCCH-----HHHHHHHhcCCCEEEEeCC
Confidence 56667 66676 99999999997554445556655 34689999999999874 3667777666799999999
Q ss_pred CCCC
Q 042652 118 HDLW 121 (328)
Q Consensus 118 HD~~ 121 (328)
||.+
T Consensus 85 hD~~ 88 (190)
T 1s3l_A 85 NDGE 88 (190)
T ss_dssp TCCC
T ss_pred Ccch
Confidence 9986
No 10
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.68 E-value=4.7e-16 Score=135.74 Aligned_cols=70 Identities=23% Similarity=0.240 Sum_probs=52.0
Q ss_pred cEEEEEeCCCCCCccc-------------HHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCC
Q 042652 52 LRVFVLSDLHTDYSEN-------------MTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNH 118 (328)
Q Consensus 52 ~ri~~iSDlH~~~~~~-------------~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNH 118 (328)
|||+++||+|++.... +.+++.+.....++|.|+++||+++.+.+...++++++++..|+++|+|||
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~~~~~~v~GNh 81 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALPGRKILVMGNH 81 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSSSEEEEECCTT
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCCCCEEEEeCCC
Confidence 8899999999865421 123333321125899999999999875455567788888777999999999
Q ss_pred CCC
Q 042652 119 DLW 121 (328)
Q Consensus 119 D~~ 121 (328)
|..
T Consensus 82 D~~ 84 (195)
T 1xm7_A 82 DKD 84 (195)
T ss_dssp CCC
T ss_pred CCc
Confidence 975
No 11
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.68 E-value=1.1e-16 Score=144.55 Aligned_cols=71 Identities=13% Similarity=0.174 Sum_probs=52.7
Q ss_pred CcEEEEEeCCCCCCcccHHHHHHHhh-cCC--CCCEEEEcccccCCchhHHHHHHHHHhcC--CcEEEECCCCCCC
Q 042652 51 GLRVFVLSDLHTDYSENMTWVKCLST-TRH--KKDVLLVAGDVAEKYDDFVLTMSLLKDRF--QRVLFVPGNHDLW 121 (328)
Q Consensus 51 ~~ri~~iSDlH~~~~~~~~~l~~l~~-~~~--~~D~li~~GDi~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD~~ 121 (328)
||||+++||+|.......++++.+.. ... ++|.||++||+++.+....++++.+.++. .++++|+||||..
T Consensus 1 mm~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~~~~~v~GNhD~~ 76 (252)
T 1nnw_A 1 MVYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQI 76 (252)
T ss_dssp -CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHSCEEEECCHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhcCeeEEecchHHH
Confidence 58999999999876555566666630 033 78999999999987654455666666643 5799999999964
No 12
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.67 E-value=3.4e-16 Score=134.49 Aligned_cols=146 Identities=16% Similarity=0.118 Sum_probs=96.4
Q ss_pred CCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCCCCCCCCCch
Q 042652 50 SGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLWCRGEENDF 129 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~~~~~~~~~ 129 (328)
.+|||+++||+|......+++++.+ .. ++|.|+++||+... .+..+..|+++|+||||......
T Consensus 5 ~~m~i~~isD~H~~~~~~~~~~~~~--~~-~~d~i~~~GD~~~~---------~l~~l~~~~~~v~GNhD~~~~~p---- 68 (176)
T 3ck2_A 5 AKQTIIVMSDSHGDSLIVEEVRDRY--VG-KVDAVFHNGDSELR---------PDSPLWEGIRVVKGNMDFYAGYP---- 68 (176)
T ss_dssp CCEEEEEECCCTTCHHHHHHHHHHH--TT-TSSEEEECSCCCSC---------TTCGGGTTEEECCCTTCCSTTCC----
T ss_pred cCcEEEEEecCCCCHHHHHHHHHHh--hc-CCCEEEECCCCchH---------HHHhhhCCeEEecCcccchhcCC----
Confidence 4699999999997654444556555 33 89999999998321 12222248999999999763210
Q ss_pred hhHHHHHHHHHhcccccccccceEEEcCEEEeccCCCCCCCCCCcccccCCccCCcceeeecccCcccccccccccCCCC
Q 042652 130 PDSLEKLNKLLDACRGLGVEINPVVIDGLGIIPLFSWYHESFDREKDISGIRILPLEMVIHFLFSLQDLCPEKRMLFYPN 209 (328)
Q Consensus 130 ~~~~~~~~~l~~~~~~l~v~~~~~~i~g~~iiG~~~w~~~~f~~e~~i~~~~~~~~~lv~H~p~P~~~~~~~~~~~~~~~ 209 (328)
....+.++|.++ +++|++ |...
T Consensus 69 -------------------~~~~~~~~~~~i--------------------------~~~Hg~-~~~~------------ 90 (176)
T 3ck2_A 69 -------------------ERLVTELGSTKI--------------------------IQTHGH-LFDI------------ 90 (176)
T ss_dssp -------------------SEEEEEETTEEE--------------------------EEECSG-GGTT------------
T ss_pred -------------------cEEEEEECCeEE--------------------------EEECCC-ccCC------------
Confidence 011233344433 678888 7521
Q ss_pred CCCCCCcHHHHHHHHHhhcccCCCccEEEEcccccCCceEECCEEEEec-cccChhhhhcccCCCCCCcceEEe
Q 042652 210 LPKIIGSDFLELRIRSIHGAMGSTSACHVFGHTHFSWDAVLDGIRYVQA-PLAYPRERKRRMNGGENQLPYCVY 282 (328)
Q Consensus 210 ~~~~~gs~~l~~~l~~~~~~~~~~v~~~i~GH~H~~~~~~~~g~~~v~~-~~gy~~~~~~~~~~~~g~~~~~l~ 282 (328)
..+.+.+.+.+++. ++++++|||+|.+.....+|+.++++ +++.++.. ...++|..+.+.
T Consensus 91 ---~~~~~~l~~~~~~~------~~d~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~----~~~~~y~il~~~ 151 (176)
T 3ck2_A 91 ---NFNFQKLDYWAQEE------EAAICLYGHLHVPSAWLEGKILFLNPGSISQPRGT----IRECLYARVEID 151 (176)
T ss_dssp ---TTCSHHHHHHHHHT------TCSEEECCSSCCEEEEEETTEEEEEECCSSSCCTT----CCSCCEEEEEEC
T ss_pred ---CCCHHHHHHHHHhc------CCCEEEECCcCCCCcEEECCEEEEECCCCCcCCCC----CCCCeEEEEEEc
Confidence 23556666666553 47899999999999888999988876 56666521 112578777775
No 13
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.60 E-value=5.1e-15 Score=144.44 Aligned_cols=214 Identities=16% Similarity=0.086 Sum_probs=115.5
Q ss_pred CCCCcEEEEEeCCCCCCcc----------------------cH----HHHHHHhhcCCCCCEEEEcccccCCc--hhHHH
Q 042652 48 SASGLRVFVLSDLHTDYSE----------------------NM----TWVKCLSTTRHKKDVLLVAGDVAEKY--DDFVL 99 (328)
Q Consensus 48 ~~~~~ri~~iSDlH~~~~~----------------------~~----~~l~~l~~~~~~~D~li~~GDi~~~~--~~~~~ 99 (328)
...+|||+++||+|++... .. .+++.+ +..++|+||++||+++.+ ..+..
T Consensus 36 ~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~d~vi~~GDl~~~~~~~~~~~ 113 (443)
T 2xmo_A 36 KDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADV--ESKKTDVLIISGDLTNNGEKTSHEE 113 (443)
T ss_dssp SCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHH--HHHTCSEEEEESCCBSSCCHHHHHH
T ss_pred CCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHH--HHcCCCEEEECCCCCCCCCHHHHHH
Confidence 3467999999999986421 11 233333 356799999999999865 23444
Q ss_pred HHHHHHhc---CCcEEEECCCCCCCCCCCCCchh---------hHHHHHHHHHhccc---cc--ccccceE---EEcCEE
Q 042652 100 TMSLLKDR---FQRVLFVPGNHDLWCRGEENDFP---------DSLEKLNKLLDACR---GL--GVEINPV---VIDGLG 159 (328)
Q Consensus 100 ~~~~l~~~---~~~v~~V~GNHD~~~~~~~~~~~---------~~~~~~~~l~~~~~---~l--~v~~~~~---~i~g~~ 159 (328)
+.+.++.+ ..|+++|+||||+...... .+. .....+........ .+ ......+ ..++++
T Consensus 114 ~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 192 (443)
T 2xmo_A 114 LAKKLTQVEKNGTQVFVVPGNHDINNPWAR-KFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVW 192 (443)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTTSSCTTCE-EEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEE
T ss_pred HHHHHHHHHhCCCeEEEECCcCCCCCcccc-ccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEE
Confidence 45555544 7899999999998753211 000 00111221111000 00 0001122 257899
Q ss_pred EeccCCCCCC------CCCCcccccC------------Cc--cCCcceeeecccCcccccccccccCCCCCCCCCCcHHH
Q 042652 160 IIPLFSWYHE------SFDREKDISG------------IR--ILPLEMVIHFLFSLQDLCPEKRMLFYPNLPKIIGSDFL 219 (328)
Q Consensus 160 iiG~~~w~~~------~f~~e~~i~~------------~~--~~~~~lv~H~p~P~~~~~~~~~~~~~~~~~~~~gs~~l 219 (328)
|+++++.... .....+.+.. .. -.+..+++||| |....... ..-....+.+.+
T Consensus 193 ~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~~~~Iv~~H~p-~~~~~~~~------~~~~~~~~~~~l 265 (443)
T 2xmo_A 193 LLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHN-LTDHNDVI------QKGYTINYNQQV 265 (443)
T ss_dssp EEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTTCEEEEECSSB-SSCSSCC--------CCSBCTTHHHH
T ss_pred EEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcCCeEEEEECCC-Cccccccc------ccccccccHHHH
Confidence 9998764211 0000111110 00 01234788999 86432111 000112356667
Q ss_pred HHHHHHhhcccCCCccEEEEcccccCCceEE---CC--EEEEec-cccChhhhhcccCCCCCCcceEEecCCc
Q 042652 220 ELRIRSIHGAMGSTSACHVFGHTHFSWDAVL---DG--IRYVQA-PLAYPRERKRRMNGGENQLPYCVYSDGK 286 (328)
Q Consensus 220 ~~~l~~~~~~~~~~v~~~i~GH~H~~~~~~~---~g--~~~v~~-~~gy~~~~~~~~~~~~g~~~~~l~~dg~ 286 (328)
.+.++++ ++++++|||+|....... +| +..+++ +++. ..++|+.+.+.++++
T Consensus 266 ~~ll~~~------~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~---------~p~~y~il~i~~~~~ 323 (443)
T 2xmo_A 266 IDALTEG------AMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV---------FPHKYGNITYSAKNK 323 (443)
T ss_dssp HHHHHHT------TCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS---------TTCEEEEEEEETTTT
T ss_pred HHHHHHc------CCeEEEECCcccCchhhcccCCCCceEEEEcCcccc---------CCCCeEEEEEeCCCc
Confidence 7777765 478999999999886554 34 233332 2221 246899888887774
No 14
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.60 E-value=1.6e-15 Score=139.41 Aligned_cols=72 Identities=17% Similarity=0.085 Sum_probs=57.2
Q ss_pred CCCCCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCCC
Q 042652 47 TSASGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLW 121 (328)
Q Consensus 47 ~~~~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~ 121 (328)
.+.+++||++|||+|.+....+++++.+ ...++|.|+++||+++.+....+++++|+++ .++++|+||||.+
T Consensus 7 ~~~~~~~i~~iSDiHg~~~~l~~vl~~~--~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~-~~~~~v~GNhD~~ 78 (270)
T 3qfm_A 7 HHMDMTKIALLSDIHGNTTALEAVLADA--RQLGVDEYWLLGDILMPGTGRRRILDLLDQL-PITARVLGNWEDS 78 (270)
T ss_dssp ----CEEEEEECCCTTCHHHHHHHHHHH--HHTTCCEEEECSCCSSSSSCSHHHHHHHHTS-CEEEECCCHHHHH
T ss_pred ccccccEEEEEecCCCCHHHHHHHHHHH--HhcCCCEEEEcCCCCCCCCCHHHHHHHHHcc-CCEEEEcCChHHH
Confidence 3446799999999998876666777776 4458999999999999876667888888876 4799999999975
No 15
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.59 E-value=2e-14 Score=124.17 Aligned_cols=64 Identities=22% Similarity=0.138 Sum_probs=48.5
Q ss_pred CCcEEEEEeCCCC--CCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCCC
Q 042652 50 SGLRVFVLSDLHT--DYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLW 121 (328)
Q Consensus 50 ~~~ri~~iSDlH~--~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~ 121 (328)
.+|||+++||+|. ......+.++.+ . .++|.|+++||+++. .+++.|+++..|+++|+||||..
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~--~-~~~D~ii~~GD~~~~-----~~~~~l~~~~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNS--L-KEYDGVIGLGDYVDL-----DTVILLEKFSKEFYGVHGNMDYP 86 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHG--G-GGCSEEEESSCBSCH-----HHHHHHHHHTSSEEECCCSSSCG
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHH--h-cCCCEEEECCCCCCH-----HHHHHHHhcCCCEEEEECCCCcH
Confidence 4689999999995 233334555554 2 679999999999873 46677777667999999999975
No 16
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.56 E-value=1.3e-14 Score=128.28 Aligned_cols=70 Identities=19% Similarity=0.246 Sum_probs=55.1
Q ss_pred CCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCch--------hHHHHHHHHHhcCCcEEEECCCCCCC
Q 042652 50 SGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYD--------DFVLTMSLLKDRFQRVLFVPGNHDLW 121 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~--------~~~~~~~~l~~~~~~v~~V~GNHD~~ 121 (328)
.+|||+++||+|++....+++++.+ +..++|.||++||+++.+. ...+++++|+++..++++|+||||..
T Consensus 24 ~mmki~~iSD~H~~~~~l~~~l~~~--~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 24 AMMKLMFASDIHGSLPATERVLELF--AQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDSE 101 (208)
T ss_dssp -CCEEEEECCCTTBHHHHHHHHHHH--HHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCCH
T ss_pred ccEEEEEEEcCCCCHHHHHHHHHHH--HhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcCCceEEEECCCchH
Confidence 4699999999998765445566665 3357899999999998643 25778888888767999999999974
No 17
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.55 E-value=2.3e-15 Score=136.03 Aligned_cols=68 Identities=21% Similarity=0.271 Sum_probs=55.2
Q ss_pred CCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCCCC
Q 042652 50 SGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLWC 122 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~~ 122 (328)
++|||+++||+|.......++++.+ . ++|.++++||+++.+....++++.++++. .+++|+||||.+.
T Consensus 2 ~~mri~~isDiHg~~~~l~~~l~~~--~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~-~~~~v~GNhD~~~ 69 (246)
T 3rqz_A 2 NAMRILIISDVHANLVALEAVLSDA--G--RVDDIWSLGDIVGYGPRPRECVELVRVLA-PNISVIGNHDWAC 69 (246)
T ss_dssp CCCCEEEECCCTTCHHHHHHHHHHH--C--SCSEEEECSCCSSSSSCHHHHHHHHHHHC-SSEECCCHHHHHH
T ss_pred CCcEEEEEeecCCCHHHHHHHHHhc--c--CCCEEEECCCcCCCCCCHHHHHHHHHhcC-CCEEEeCchHHHH
Confidence 4799999999997765555666655 3 89999999999998777777888888764 3799999999754
No 18
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.53 E-value=6.7e-15 Score=141.76 Aligned_cols=80 Identities=25% Similarity=0.344 Sum_probs=53.5
Q ss_pred cCCcccCCCCCCCcEEEEEeCCCCCCcc-------------cHHHHHHHhhcCCCCCEEEEcccccCCch----hHHHHH
Q 042652 39 TSSAAASSTSASGLRVFVLSDLHTDYSE-------------NMTWVKCLSTTRHKKDVLLVAGDVAEKYD----DFVLTM 101 (328)
Q Consensus 39 ~~~~~~~~~~~~~~ri~~iSDlH~~~~~-------------~~~~l~~l~~~~~~~D~li~~GDi~~~~~----~~~~~~ 101 (328)
++.+| +...+|||+++||+|++... ..++++.+ ...++|+||++||+++... .+..+.
T Consensus 11 ~~~~~---~~~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~--~~~~~D~VliaGDl~d~~~p~~~~~~~~~ 85 (386)
T 3av0_A 11 SSGLV---PRGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKI--LEIKPDVVLHSGDLFNDLRPPVKALRIAM 85 (386)
T ss_dssp ----------CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHH--HTTCCSEEEECSCSBSSSSCCHHHHHHHH
T ss_pred ccccc---cCCCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHH--HHcCCCEEEECCCCCCCCCCCHHHHHHHH
Confidence 44566 66788999999999998521 11233333 4678999999999998752 334455
Q ss_pred HHHHhc---CCcEEEECCCCCCCCC
Q 042652 102 SLLKDR---FQRVLFVPGNHDLWCR 123 (328)
Q Consensus 102 ~~l~~~---~~~v~~V~GNHD~~~~ 123 (328)
+.|+++ +.||++|+||||....
T Consensus 86 ~~l~~L~~~~~pv~~v~GNHD~~~~ 110 (386)
T 3av0_A 86 QAFKKLHENNIKVYIVAGNHEMPRR 110 (386)
T ss_dssp HHHHHHHHTTCEEEECCCGGGSCSS
T ss_pred HHHHHHHhcCCcEEEEcCCCCCCcc
Confidence 555554 6899999999998754
No 19
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.44 E-value=3e-13 Score=127.58 Aligned_cols=74 Identities=22% Similarity=0.352 Sum_probs=45.4
Q ss_pred CCCcEEEEEeCCCCCCc----c--------cHHHHHHHhh--cCCCCCEEEEccc-ccCCch----hHHHHHHHHHhcC-
Q 042652 49 ASGLRVFVLSDLHTDYS----E--------NMTWVKCLST--TRHKKDVLLVAGD-VAEKYD----DFVLTMSLLKDRF- 108 (328)
Q Consensus 49 ~~~~ri~~iSDlH~~~~----~--------~~~~l~~l~~--~~~~~D~li~~GD-i~~~~~----~~~~~~~~l~~~~- 108 (328)
..+|||+++||+|++.. . ....++.+.. +..++|+||++|| ++|... ....+.+.|+++.
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 46799999999998721 0 0222332211 4568999999999 998642 2334455555543
Q ss_pred -CcEEEECCCCCCCC
Q 042652 109 -QRVLFVPGNHDLWC 122 (328)
Q Consensus 109 -~~v~~V~GNHD~~~ 122 (328)
.|+++|+||||...
T Consensus 96 ~~pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 96 TAPVVVLPGNHDWKG 110 (336)
T ss_dssp HSCEEECCC------
T ss_pred cCCEEEECCCCCccc
Confidence 79999999999874
No 20
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=99.41 E-value=1.6e-13 Score=130.14 Aligned_cols=214 Identities=12% Similarity=0.016 Sum_probs=114.0
Q ss_pred CCcEEEEEeCCCCCCcccHHHHHHHhh--cCCCCCEEEEcccccCCch------hHHHHHHHH-----HhcCCcEEEECC
Q 042652 50 SGLRVFVLSDLHTDYSENMTWVKCLST--TRHKKDVLLVAGDVAEKYD------DFVLTMSLL-----KDRFQRVLFVPG 116 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~~~~~l~~l~~--~~~~~D~li~~GDi~~~~~------~~~~~~~~l-----~~~~~~v~~V~G 116 (328)
..+||++++|+|.+.....+..+.+.. +..++|+||++||+++.+. .+....+.+ ..+..|++.|+|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 458999999999876543333333321 4679999999999997642 123333222 234689999999
Q ss_pred CCCCCCCCCCCchhhHHHHHH----------HHHh-----cccccccccc------eEEE--------cC-----EEEec
Q 042652 117 NHDLWCRGEENDFPDSLEKLN----------KLLD-----ACRGLGVEIN------PVVI--------DG-----LGIIP 162 (328)
Q Consensus 117 NHD~~~~~~~~~~~~~~~~~~----------~l~~-----~~~~l~v~~~------~~~i--------~g-----~~iiG 162 (328)
|||++.... ..+.... .+.. ...+..+.+. .+.+ .| +.|+.
T Consensus 82 NHD~~~~~~-----aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~ 156 (342)
T 3tgh_A 82 TRDWTGNYN-----AQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIF 156 (342)
T ss_dssp HHHHTSCHH-----HHHHHHHC---------------CCCSSCEEECSSSSEEEEEEEEEC---------CEEEEEEEEE
T ss_pred CCccCCCch-----HhhhhhhcccccccccccccccccccCCCCccCCcceEEEEEEeeccccccccccCCCCceEEEEE
Confidence 999986421 1111110 0000 1111222211 1222 23 67888
Q ss_pred cCCCCCC-CCC--C--cccc-cCCcc--------CCcceeeecccCcccccccccccCCCCCCCCCCcHHHHHHHHHhhc
Q 042652 163 LFSWYHE-SFD--R--EKDI-SGIRI--------LPLEMVIHFLFSLQDLCPEKRMLFYPNLPKIIGSDFLELRIRSIHG 228 (328)
Q Consensus 163 ~~~w~~~-~f~--~--e~~i-~~~~~--------~~~~lv~H~p~P~~~~~~~~~~~~~~~~~~~~gs~~l~~~l~~~~~ 228 (328)
++++.-. ++. . +... .+..| +...+++||| +..... ......+++.|..+..
T Consensus 157 LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~~~~~IV~~HhP-~~~~~~-------------~~~~~~l~~~l~~ll~ 222 (342)
T 3tgh_A 157 IDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKIADFIIVVGDQP-IYSSGY-------------SRGSSYLAYYLLPLLK 222 (342)
T ss_dssp CCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHHCSEEEEECSSC-SSCSST-------------TCCCHHHHHHTHHHHH
T ss_pred EeCcccccCCcccccchHHHHHHHHHHHHhhccCCcEEEEECCC-CCCCCC-------------CCCcHHHHHHHHHHHH
Confidence 8876421 111 0 0000 00111 1233678999 653211 1122334444444444
Q ss_pred ccCCCccEEEEcccccCCceEECCEEEEeccccChhhh--------hcccCCCCCCcceEEecC
Q 042652 229 AMGSTSACHVFGHTHFSWDAVLDGIRYVQAPLAYPRER--------KRRMNGGENQLPYCVYSD 284 (328)
Q Consensus 229 ~~~~~v~~~i~GH~H~~~~~~~~g~~~v~~~~gy~~~~--------~~~~~~~~g~~~~~l~~d 284 (328)
++ +|+++++||+|.......+|+.+++.+.|...+. ..-.....||..+.+.++
T Consensus 223 ~~--~VdlvlsGH~H~~~~~~~~g~~~iv~Ga~g~~~~~~~~~~~~s~f~~~~~Gf~~l~v~~~ 284 (342)
T 3tgh_A 223 DA--EVDLYISGHDNNMEVIEDNDMAHITCGSGSMSQGKSGMKNSKSLFFSSDIGFCVHELSNN 284 (342)
T ss_dssp HT--TCCEEEECSSSSEEEEEETTEEEEEECCSSCCCCCCSSCCTTEEEEECSSEEEEEEEETT
T ss_pred Hc--CCCEEEECCCcceeEEeeCCcEEEEeCccccccccCCCCCCcceeecCCCcEEEEEEECC
Confidence 42 5999999999999988889998887644321110 000123668887777544
No 21
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=99.40 E-value=2.2e-12 Score=125.44 Aligned_cols=183 Identities=11% Similarity=0.068 Sum_probs=98.1
Q ss_pred CCCCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCc-------hhHHHHHHHHHhc--CCcEEEECCCC
Q 042652 48 SASGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKY-------DDFVLTMSLLKDR--FQRVLFVPGNH 118 (328)
Q Consensus 48 ~~~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~-------~~~~~~~~~l~~~--~~~v~~V~GNH 118 (328)
....+||+++||+|.+.. ....++.+.....++|+||++||+++.. ..+..+.+.++.+ ..|+++|+|||
T Consensus 123 ~~~~~~f~~~gD~~~~~~-~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNH 201 (426)
T 1xzw_A 123 PDVPYVFGLIGDIGQTHD-SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNH 201 (426)
T ss_dssp TTCCEEEEEECSCTTBHH-HHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGG
T ss_pred CCCCeEEEEEEeCCCCCc-hHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEecccc
Confidence 356899999999998642 2344555643234899999999999642 1223333444432 67999999999
Q ss_pred CCCCCCCCCchhhHHHHHHHHHhccc----ccccccceEEEcCEEEeccCCCCCCCCCCc------ccccCCc--cCC-c
Q 042652 119 DLWCRGEENDFPDSLEKLNKLLDACR----GLGVEINPVVIDGLGIIPLFSWYHESFDRE------KDISGIR--ILP-L 185 (328)
Q Consensus 119 D~~~~~~~~~~~~~~~~~~~l~~~~~----~l~v~~~~~~i~g~~iiG~~~w~~~~f~~e------~~i~~~~--~~~-~ 185 (328)
|......... ...+..+........ ..+-.-..+..+++.|+++++..++....+ +.+.... ..+ .
T Consensus 202 D~~~~~~~~~-~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 280 (426)
T 1xzw_A 202 EIDYAPDIGE-YQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWL 280 (426)
T ss_dssp GCCCBGGGTB-CSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEE
T ss_pred ccccCCcccc-ccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEE
Confidence 9875320000 001111211111000 001112356789999999987543221111 1122111 112 3
Q ss_pred ceeeecccCcccccccccccCCCCCCCCCCcHHHHHHHHHhhcccCCCccEEEEcccccCC
Q 042652 186 EMVIHFLFSLQDLCPEKRMLFYPNLPKIIGSDFLELRIRSIHGAMGSTSACHVFGHTHFSW 246 (328)
Q Consensus 186 ~lv~H~p~P~~~~~~~~~~~~~~~~~~~~gs~~l~~~l~~~~~~~~~~v~~~i~GH~H~~~ 246 (328)
.+++|+| +....... ......+++.++++..++ +++++|+||+|...
T Consensus 281 Iv~~H~P-~~~~~~~~-----------~~~~~~~r~~l~~ll~~~--~VdlvlsGH~H~~~ 327 (426)
T 1xzw_A 281 IVLVHAP-LYNSYEAH-----------YMEGEAMRAIFEPYFVYY--KVDIVFSGHVHSYE 327 (426)
T ss_dssp EEECSSC-SSCCBSTT-----------TTTTHHHHHHHHHHHHHT--TCSEEEECSSSSEE
T ss_pred EEEeccC-ceeCCCcc-----------cCCCHHHHHHHHHHHHHh--CCCEEEEcChhhhe
Confidence 4667888 65321100 011233455555554442 58999999999854
No 22
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.38 E-value=1.3e-13 Score=126.79 Aligned_cols=73 Identities=22% Similarity=0.178 Sum_probs=46.1
Q ss_pred CCcEEEEEeCCCCCCcc------cHHHHHHHhh--cCCCCCEEEEcccccCC------c-hhHHHHHH-HHH--hc-CCc
Q 042652 50 SGLRVFVLSDLHTDYSE------NMTWVKCLST--TRHKKDVLLVAGDVAEK------Y-DDFVLTMS-LLK--DR-FQR 110 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~------~~~~l~~l~~--~~~~~D~li~~GDi~~~------~-~~~~~~~~-~l~--~~-~~~ 110 (328)
..|||+++||+|.+... ..++.+.+.. +..++|+||++||++.. . ..+...++ .+. .+ ..|
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p 84 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 84 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred CceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCC
Confidence 57999999999997521 1222222221 35689999999998532 1 12222222 111 24 689
Q ss_pred EEEECCCCCCCC
Q 042652 111 VLFVPGNHDLWC 122 (328)
Q Consensus 111 v~~V~GNHD~~~ 122 (328)
+++|+||||...
T Consensus 85 ~~~v~GNHD~~~ 96 (313)
T 1ute_A 85 WHVLAGNHDHLG 96 (313)
T ss_dssp EEECCCHHHHHS
T ss_pred EEEECCCCccCC
Confidence 999999999864
No 23
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=99.38 E-value=4.5e-12 Score=123.17 Aligned_cols=180 Identities=13% Similarity=0.140 Sum_probs=94.5
Q ss_pred CCCCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCc----------hhHHHHHHHHHhcCCcEEEECCC
Q 042652 48 SASGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKY----------DDFVLTMSLLKDRFQRVLFVPGN 117 (328)
Q Consensus 48 ~~~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~----------~~~~~~~~~l~~~~~~v~~V~GN 117 (328)
....+||+++||+|.+... .+.++.+.....++|+||++||+++.. +.+...++.+.. ..|+++|+||
T Consensus 116 ~~~~~~f~~igD~~~~~~~-~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~-~~P~~~v~GN 193 (424)
T 2qfp_A 116 LDVPYTFGLIGDLGQSFDS-NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVA-YQPWIWTAGN 193 (424)
T ss_dssp TTCCEEEEEECSCTTBHHH-HHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHT-TSCEEECCCH
T ss_pred CCCCeEEEEEEeCCCCCCh-HHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHh-cCCeEeecCC
Confidence 3468999999999987542 234555532234899999999999752 122333333333 5899999999
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHhcc----cccccccceEEEcCEEEeccCCCCCCCCCCc------ccccCCc--cCCc
Q 042652 118 HDLWCRGEENDFPDSLEKLNKLLDAC----RGLGVEINPVVIDGLGIIPLFSWYHESFDRE------KDISGIR--ILPL 185 (328)
Q Consensus 118 HD~~~~~~~~~~~~~~~~~~~l~~~~----~~l~v~~~~~~i~g~~iiG~~~w~~~~f~~e------~~i~~~~--~~~~ 185 (328)
||.......... ..+..+....... ....-.-..+.++++.|+++++........+ +.+.... ..+.
T Consensus 194 HD~~~~~~~~~~-~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~ 272 (424)
T 2qfp_A 194 HEIEFAPEINET-EPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPW 272 (424)
T ss_dssp HHHCCBGGGTBC-STTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCE
T ss_pred cccccCCccccc-ccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCE
Confidence 998642110000 0111111100000 0000012367889999999987543221111 1122111 1122
Q ss_pred -ceeeecccCcccccccccccCCCCCCCCCCcHHHHHHHHHhhcccCCCccEEEEccccc
Q 042652 186 -EMVIHFLFSLQDLCPEKRMLFYPNLPKIIGSDFLELRIRSIHGAMGSTSACHVFGHTHF 244 (328)
Q Consensus 186 -~lv~H~p~P~~~~~~~~~~~~~~~~~~~~gs~~l~~~l~~~~~~~~~~v~~~i~GH~H~ 244 (328)
.+++|+| +..... ..+.....+++.++.+..+ .+++++|+||+|.
T Consensus 273 ~Iv~~H~P-~~~~~~-----------~~~~~~~~~r~~l~~ll~~--~~VdlvlsGH~H~ 318 (424)
T 2qfp_A 273 LIVLMHSP-LYNSYN-----------HHFMEGEAMRTKFEAWFVK--YKVDVVFAGHVHA 318 (424)
T ss_dssp EEEECSSC-SSCCBS-----------TTTTTTHHHHHHHHHHHHH--TTCSEEEECSSSS
T ss_pred EEEEeCcC-ceecCc-----------ccccccHHHHHHHHHHHHH--hCCcEEEECChhh
Confidence 3555666 542110 0011223344455554443 2589999999998
No 24
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=99.38 E-value=4.4e-13 Score=131.23 Aligned_cols=76 Identities=22% Similarity=0.323 Sum_probs=54.0
Q ss_pred CCCCCcEEEEEeCCCCCCcc--------c----HHHHHHHhhcCCCCCEEEEcccccCCch----hHHHHHHHHHh----
Q 042652 47 TSASGLRVFVLSDLHTDYSE--------N----MTWVKCLSTTRHKKDVLLVAGDVAEKYD----DFVLTMSLLKD---- 106 (328)
Q Consensus 47 ~~~~~~ri~~iSDlH~~~~~--------~----~~~l~~l~~~~~~~D~li~~GDi~~~~~----~~~~~~~~l~~---- 106 (328)
...++|||+++||+|++... . .++++.+ ...++|+||++||+++... ....+++.|++
T Consensus 72 ~~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~--~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g 149 (472)
T 4fbk_A 72 GSENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIA--RERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLG 149 (472)
T ss_dssp -CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHH--HHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBS
T ss_pred CCCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHH--HhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhccc
Confidence 55678999999999998542 1 2334444 4678999999999999752 33444455443
Q ss_pred --------------------------------cCCcEEEECCCCCCCCCC
Q 042652 107 --------------------------------RFQRVLFVPGNHDLWCRG 124 (328)
Q Consensus 107 --------------------------------~~~~v~~V~GNHD~~~~~ 124 (328)
.+.|||+|+||||...+.
T Consensus 150 ~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~ 199 (472)
T 4fbk_A 150 DKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD 199 (472)
T ss_dssp SCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC-
T ss_pred CCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCcccc
Confidence 267999999999997653
No 25
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=99.37 E-value=9.1e-13 Score=124.23 Aligned_cols=69 Identities=23% Similarity=0.392 Sum_probs=49.0
Q ss_pred cEEEEEeCCCCCCcc--c-----------HHHHHHHhhcCCCCCEEEEcccccCCch----hHHHHHHHHH---hcCCcE
Q 042652 52 LRVFVLSDLHTDYSE--N-----------MTWVKCLSTTRHKKDVLLVAGDVAEKYD----DFVLTMSLLK---DRFQRV 111 (328)
Q Consensus 52 ~ri~~iSDlH~~~~~--~-----------~~~l~~l~~~~~~~D~li~~GDi~~~~~----~~~~~~~~l~---~~~~~v 111 (328)
|||+++||+|++... . .++++.+ +..++|+||++||+++... ....+.+.++ +...|+
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v 78 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIA--VQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPV 78 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHH--HHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHH--HhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcE
Confidence 899999999998632 0 1223333 4678999999999998641 2344444444 446899
Q ss_pred EEECCCCCCCC
Q 042652 112 LFVPGNHDLWC 122 (328)
Q Consensus 112 ~~V~GNHD~~~ 122 (328)
++|+||||.+.
T Consensus 79 ~~v~GNHD~~~ 89 (333)
T 1ii7_A 79 FAIEGNHDRTQ 89 (333)
T ss_dssp EEECCTTTCCS
T ss_pred EEeCCcCCCcc
Confidence 99999999874
No 26
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.36 E-value=2.4e-12 Score=123.65 Aligned_cols=69 Identities=19% Similarity=0.355 Sum_probs=47.5
Q ss_pred cEEEEEeCCCCCCc----cc--------HHHHHHHhh--cCCCCCEEEEccccc-CCc----h---hHHHHHHHHHhcCC
Q 042652 52 LRVFVLSDLHTDYS----EN--------MTWVKCLST--TRHKKDVLLVAGDVA-EKY----D---DFVLTMSLLKDRFQ 109 (328)
Q Consensus 52 ~ri~~iSDlH~~~~----~~--------~~~l~~l~~--~~~~~D~li~~GDi~-~~~----~---~~~~~~~~l~~~~~ 109 (328)
|||+++||+|++.. .. ...++.+.. ...++|+||++||++ +.. . .+..+++.|.+. .
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~-~ 79 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT-A 79 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH-S
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 89999999999875 11 122333221 456899999999999 642 1 233444555555 8
Q ss_pred cEEEECCCCCCC
Q 042652 110 RVLFVPGNHDLW 121 (328)
Q Consensus 110 ~v~~V~GNHD~~ 121 (328)
|+++|+||||..
T Consensus 80 ~v~~i~GNHD~~ 91 (379)
T 3tho_B 80 PVVVLPGNQDWK 91 (379)
T ss_dssp CEEECCCTTSCT
T ss_pred CEEEEcCCCccc
Confidence 999999999954
No 27
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=99.33 E-value=1.2e-12 Score=127.41 Aligned_cols=75 Identities=20% Similarity=0.344 Sum_probs=54.4
Q ss_pred CCCCCcEEEEEeCCCCCCccc------------HHHHHHHhhcCCCCCEEEEcccccCCc----hhHHHHHHHHHh----
Q 042652 47 TSASGLRVFVLSDLHTDYSEN------------MTWVKCLSTTRHKKDVLLVAGDVAEKY----DDFVLTMSLLKD---- 106 (328)
Q Consensus 47 ~~~~~~ri~~iSDlH~~~~~~------------~~~l~~l~~~~~~~D~li~~GDi~~~~----~~~~~~~~~l~~---- 106 (328)
...++|||+++||+|++.... .++++.+ ...++|+||++||+++.. .....+.+.|++
T Consensus 28 ~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~--~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~ 105 (431)
T 3t1i_A 28 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLA--QENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMG 105 (431)
T ss_dssp CGGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHH--HHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBC
T ss_pred CCCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHH--hhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhcc
Confidence 344689999999999986421 2334444 467899999999999974 234445555543
Q ss_pred --------------------------------cCCcEEEECCCCCCCCC
Q 042652 107 --------------------------------RFQRVLFVPGNHDLWCR 123 (328)
Q Consensus 107 --------------------------------~~~~v~~V~GNHD~~~~ 123 (328)
...|||+|+||||...+
T Consensus 106 ~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g 154 (431)
T 3t1i_A 106 DRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTG 154 (431)
T ss_dssp SSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBT
T ss_pred CCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCccc
Confidence 25799999999998764
No 28
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.33 E-value=6.2e-13 Score=128.97 Aligned_cols=75 Identities=21% Similarity=0.326 Sum_probs=51.2
Q ss_pred CCCCcEEEEEeCCCCCCcc--------c----HHHHHHHhhcCCCCCEEEEcccccCCc----hhHHHHHHHHHh-----
Q 042652 48 SASGLRVFVLSDLHTDYSE--------N----MTWVKCLSTTRHKKDVLLVAGDVAEKY----DDFVLTMSLLKD----- 106 (328)
Q Consensus 48 ~~~~~ri~~iSDlH~~~~~--------~----~~~l~~l~~~~~~~D~li~~GDi~~~~----~~~~~~~~~l~~----- 106 (328)
...+|||+++||+|++... . .++++.+ +..++|+||++||+++.. +....+++.|++
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~--~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~ 87 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIA--RERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 87 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHH--HHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHH--HhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 4568999999999998542 1 2234444 467899999999999974 233444444433
Q ss_pred -------------------------------cCCcEEEECCCCCCCCCC
Q 042652 107 -------------------------------RFQRVLFVPGNHDLWCRG 124 (328)
Q Consensus 107 -------------------------------~~~~v~~V~GNHD~~~~~ 124 (328)
.+.|||+|+||||+..+.
T Consensus 88 ~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~ 136 (417)
T 4fbw_A 88 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD 136 (417)
T ss_dssp CCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC----
T ss_pred CcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccc
Confidence 267999999999987643
No 29
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.26 E-value=3.4e-11 Score=106.71 Aligned_cols=69 Identities=26% Similarity=0.388 Sum_probs=52.7
Q ss_pred CCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCCC
Q 042652 50 SGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLW 121 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~ 121 (328)
.+|||+++||+|.......++++.+. ...++|.||++||+++.+....++++.+.+ .++++|+||||..
T Consensus 11 ~~~~i~visDiHg~~~~l~~~l~~~~-~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~--~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 11 KYRNIWVVGDLHGCYTNLMNKLDTIG-FDNKKDLLISVGDLVDRGAENVECLELITF--PWFRAVRGNHEQM 79 (221)
T ss_dssp GCSCEEEECCCTTCHHHHHHHHHHHT-CCTTTCEEEECSCCSSSSSCHHHHHGGGGS--TTEEECCCHHHHH
T ss_pred CCceEEEEEcCCCCHHHHHHHHHHcc-CCCCCCEEEEeCCccCCCCChHHHHHHHhc--CCEEEEccCcHHH
Confidence 46999999999987655555666552 124789999999999987655666666654 4899999999964
No 30
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.81 E-value=6.3e-08 Score=96.40 Aligned_cols=73 Identities=18% Similarity=0.122 Sum_probs=48.8
Q ss_pred CCcEEEEEeCCCCCCcc----------cHHHHHHHhhcC--CCC-CEEEEcccccCCch-----hHHHHHHHHHhcCCcE
Q 042652 50 SGLRVFVLSDLHTDYSE----------NMTWVKCLSTTR--HKK-DVLLVAGDVAEKYD-----DFVLTMSLLKDRFQRV 111 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~----------~~~~l~~l~~~~--~~~-D~li~~GDi~~~~~-----~~~~~~~~l~~~~~~v 111 (328)
..+||+++||+|..... ...+++.++... .++ |+++.+||+++... ..+..++.|..++ ..
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg-~d 85 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG-YD 85 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT-CC
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC-CC
Confidence 46999999999986432 234555553211 134 79999999987642 1245667777765 34
Q ss_pred EEECCCCCCCCC
Q 042652 112 LFVPGNHDLWCR 123 (328)
Q Consensus 112 ~~V~GNHD~~~~ 123 (328)
++++||||+..+
T Consensus 86 ~~~~GNHEfd~g 97 (516)
T 1hp1_A 86 AMAIGNHEFDNP 97 (516)
T ss_dssp EEECCGGGGSSC
T ss_pred EEeeccccccCC
Confidence 788999999643
No 31
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=98.79 E-value=2.5e-09 Score=98.59 Aligned_cols=68 Identities=25% Similarity=0.382 Sum_probs=54.7
Q ss_pred cEEEEEeCCCCCCcccHHHHHHHhhcC-CCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCCC
Q 042652 52 LRVFVLSDLHTDYSENMTWVKCLSTTR-HKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLW 121 (328)
Q Consensus 52 ~ri~~iSDlH~~~~~~~~~l~~l~~~~-~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~ 121 (328)
|||+++||+|.......++++.+ .. .+.|.+|++||+++.+....++++.+.++..++++|.||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~--~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKV--EFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHT--TCCTTTCEEEECSCCSSSSSCHHHHHHHHHHTGGGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHh--CCCCCCCEEEEeCCcCCCCCccHHHHHHHHhCCCceEEEECCCcHH
Confidence 78999999998876555666655 23 4689999999999988766778888888766899999999953
No 32
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=98.78 E-value=2.5e-09 Score=97.58 Aligned_cols=66 Identities=27% Similarity=0.338 Sum_probs=51.0
Q ss_pred cEEEEEeCCCCCCcccHHHHHHHhhcCCC-CCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCCC
Q 042652 52 LRVFVLSDLHTDYSENMTWVKCLSTTRHK-KDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLW 121 (328)
Q Consensus 52 ~ri~~iSDlH~~~~~~~~~l~~l~~~~~~-~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~ 121 (328)
+||+++||+|.......++++.+ .... .|.+|++||+++.+....++++.+.+. ++++|+||||..
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~--~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~~--~~~~v~GNHd~~ 85 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAV--SFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL--GAYSVLGNHDAK 85 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHH--TCCTTTSEEEECSCCSSSSSCHHHHHHHHHHH--TCEECCCHHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHH--hccCCCCEEEEecCCCCCCCCHHHHHHHHHHC--CCEEEeCcChHH
Confidence 49999999997765555666655 3344 499999999999876556677777654 699999999964
No 33
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.74 E-value=6.6e-08 Score=96.58 Aligned_cols=71 Identities=15% Similarity=0.091 Sum_probs=48.2
Q ss_pred CCcEEEEEeCCCCCCc----------------ccHHHHHHHhhcCCCCC-EEEEcccccCCchh----------HHHHHH
Q 042652 50 SGLRVFVLSDLHTDYS----------------ENMTWVKCLSTTRHKKD-VLLVAGDVAEKYDD----------FVLTMS 102 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~----------------~~~~~l~~l~~~~~~~D-~li~~GDi~~~~~~----------~~~~~~ 102 (328)
..++|+++||+|.... ....+++.+ +...++ +++.+||+++.... ....++
T Consensus 18 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~--r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~ 95 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQD--RRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVD 95 (527)
T ss_dssp CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHH--HTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHH
T ss_pred CcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHH--HhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHH
Confidence 5699999999997542 112456665 344555 66779999987521 146677
Q ss_pred HHHhcCCcEEEECCCCCCCCC
Q 042652 103 LLKDRFQRVLFVPGNHDLWCR 123 (328)
Q Consensus 103 ~l~~~~~~v~~V~GNHD~~~~ 123 (328)
.|..++.. ++++||||+..+
T Consensus 96 ~ln~lg~D-~~t~GNHefd~G 115 (527)
T 3qfk_A 96 FYNRMAFD-FGTLGNHEFNYG 115 (527)
T ss_dssp HHHHTCCC-EECCCGGGGTTC
T ss_pred HHHhcCCc-EEeccccccccC
Confidence 77777544 567899998654
No 34
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=98.47 E-value=9.1e-08 Score=90.52 Aligned_cols=72 Identities=19% Similarity=0.246 Sum_probs=51.8
Q ss_pred CCcEEEEEeCCCCCCcccHHHHHHHhhc------CCCCCEEEEcccccCCchhHHHHHHHHHhc-------CCcEEEECC
Q 042652 50 SGLRVFVLSDLHTDYSENMTWVKCLSTT------RHKKDVLLVAGDVAEKYDDFVLTMSLLKDR-------FQRVLFVPG 116 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~~~~~l~~l~~~------~~~~D~li~~GDi~~~~~~~~~~~~~l~~~-------~~~v~~V~G 116 (328)
.+|||+++||+|+......++++.+... ..++|.+|++||++|.+....++++.|.++ +.++++|.|
T Consensus 69 ~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v~~v~G 148 (342)
T 2z72_A 69 GIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMG 148 (342)
T ss_dssp CCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeEEEEec
Confidence 4689999999998776555555543211 125799999999999876555555555442 457999999
Q ss_pred CCCCC
Q 042652 117 NHDLW 121 (328)
Q Consensus 117 NHD~~ 121 (328)
|||..
T Consensus 149 NHE~~ 153 (342)
T 2z72_A 149 NHEQM 153 (342)
T ss_dssp HHHHH
T ss_pred CCcHH
Confidence 99964
No 35
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=98.44 E-value=2.2e-07 Score=86.62 Aligned_cols=71 Identities=23% Similarity=0.242 Sum_probs=54.6
Q ss_pred CcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhc----CCcEEEECCCCCCCCC
Q 042652 51 GLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDR----FQRVLFVPGNHDLWCR 123 (328)
Q Consensus 51 ~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~----~~~v~~V~GNHD~~~~ 123 (328)
.++++++||+|+......++++.+ .....|.++++||++|.+..-.+++++|..+ ...++++.||||....
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~--~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l 123 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIG--GKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQI 123 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHH--CCTTTSCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTG
T ss_pred cCCEEEEecCCCCHHHHHHHHHHc--CCCCCCEEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHH
Confidence 478999999999877656666655 3456688899999999987666667666553 4569999999998653
No 36
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.44 E-value=1.1e-06 Score=88.27 Aligned_cols=71 Identities=17% Similarity=0.132 Sum_probs=48.5
Q ss_pred CCcEEEEEeCCCCCCc-----------------ccHHHHHHHhhcCCCCC-EEEEcccccCCch-----hHHHHHHHHHh
Q 042652 50 SGLRVFVLSDLHTDYS-----------------ENMTWVKCLSTTRHKKD-VLLVAGDVAEKYD-----DFVLTMSLLKD 106 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~-----------------~~~~~l~~l~~~~~~~D-~li~~GDi~~~~~-----~~~~~~~~l~~ 106 (328)
..+||+++||+|.... ....+++.++ ...+| +++.+||+++... .....++.|..
T Consensus 28 ~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r--~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVW--ARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHH--HHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred eeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHH--hhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 4699999999997432 1234566653 34566 8899999998642 12455677777
Q ss_pred cCCcEEEECCCCCCCCC
Q 042652 107 RFQRVLFVPGNHDLWCR 123 (328)
Q Consensus 107 ~~~~v~~V~GNHD~~~~ 123 (328)
++. -++++||||+..+
T Consensus 106 lg~-d~~~lGNHEfd~g 121 (552)
T 2z1a_A 106 LRY-RAMALGNHEFDLG 121 (552)
T ss_dssp TTC-CEEECCGGGGTTC
T ss_pred cCC-CccccccccccCC
Confidence 643 4788999999753
No 37
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.43 E-value=2.2e-06 Score=85.09 Aligned_cols=71 Identities=18% Similarity=0.129 Sum_probs=47.1
Q ss_pred CCcEEEEEeCCCCCCcc------------------cHHHHHHHhhcCCCCCEEEE-cccccCCch-----hHHHHHHHHH
Q 042652 50 SGLRVFVLSDLHTDYSE------------------NMTWVKCLSTTRHKKDVLLV-AGDVAEKYD-----DFVLTMSLLK 105 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~------------------~~~~l~~l~~~~~~~D~li~-~GDi~~~~~-----~~~~~~~~l~ 105 (328)
..++|+++||+|..... ...+++.+ +..++|.|++ +||+++... ..+..++.|.
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~--r~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln 82 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQE--KAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMN 82 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHH--HHHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHT
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHH--HhcCCCeEEEECCCCCCCchhhhhcCChHHHHHHH
Confidence 35899999999964321 12345555 3446787777 999988631 1245667777
Q ss_pred hcCCcEEEECCCCCCCCC
Q 042652 106 DRFQRVLFVPGNHDLWCR 123 (328)
Q Consensus 106 ~~~~~v~~V~GNHD~~~~ 123 (328)
.++. -++++|||||..+
T Consensus 83 ~lg~-D~~tlGNHEfd~G 99 (509)
T 3ive_A 83 TMPF-DAVTIGNHEFDHG 99 (509)
T ss_dssp TSCC-SEECCCGGGGTTC
T ss_pred hcCC-cEEeecccccccC
Confidence 6643 4567899998654
No 38
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=98.39 E-value=3e-07 Score=86.45 Aligned_cols=69 Identities=17% Similarity=0.227 Sum_probs=54.4
Q ss_pred CcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhc----CCcEEEECCCCCCC
Q 042652 51 GLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDR----FQRVLFVPGNHDLW 121 (328)
Q Consensus 51 ~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~----~~~v~~V~GNHD~~ 121 (328)
.++++++||+|+.+....++++.+ .....|.++++||++|.+....+++++|..+ ...++++.||||..
T Consensus 56 ~~~i~viGDIHG~~~~L~~ll~~~--g~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 56 EAPLKICGDIHGQYYDLLRLFEYG--GFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp CSSEEEECBCTTCHHHHHHHHHHH--CSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cCceEEecCCCCCHHHHHHHHHHh--CCCCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHh
Confidence 367999999999887666667665 4456688999999999987666677776543 45799999999965
No 39
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=98.35 E-value=7.4e-07 Score=83.17 Aligned_cols=71 Identities=14% Similarity=0.142 Sum_probs=53.0
Q ss_pred CCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhc----CCcEEEECCCCCCC
Q 042652 50 SGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDR----FQRVLFVPGNHDLW 121 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~----~~~v~~V~GNHD~~ 121 (328)
.++|++++||+|+.+....++++... .....+.+++.||++|.+..-.+++..|..+ ...++++.||||..
T Consensus 58 ~~~ri~viGDIHG~~~~L~~ll~~~g-~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 58 ETEKITVCGDTHGQFYDLLNIFELNG-LPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHC-CCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCceEEEEecCCCCHHHHHHHHHHhC-CCCCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccc
Confidence 57999999999998876556665541 1223456999999999987666666666543 45799999999964
No 40
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.34 E-value=5.6e-06 Score=83.28 Aligned_cols=40 Identities=10% Similarity=-0.099 Sum_probs=29.9
Q ss_pred CC-EEEEcccccCCch--h---HHHHHHHHHhcCCcEEEECCCCCCCC
Q 042652 81 KD-VLLVAGDVAEKYD--D---FVLTMSLLKDRFQRVLFVPGNHDLWC 122 (328)
Q Consensus 81 ~D-~li~~GDi~~~~~--~---~~~~~~~l~~~~~~v~~V~GNHD~~~ 122 (328)
+| +++.+||+.+... . .+..++.|..+...++ + ||||+..
T Consensus 123 pd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg~d~~-~-GNHEfd~ 168 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHM-V-SHWEWTL 168 (562)
T ss_dssp CCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHTCCEE-C-CSGGGGG
T ss_pred CCEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhCCcEE-e-cchhccc
Confidence 78 8999999998642 1 2456778888777764 6 9999854
No 41
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.30 E-value=7.1e-07 Score=87.71 Aligned_cols=70 Identities=14% Similarity=0.132 Sum_probs=53.0
Q ss_pred CCcEEEEEeCCCCCCcccHHHHHHHhhcCC-CCCEEEEcccccCCchhHHHHHHHHHhc----CCcEEEECCCCCCC
Q 042652 50 SGLRVFVLSDLHTDYSENMTWVKCLSTTRH-KKDVLLVAGDVAEKYDDFVLTMSLLKDR----FQRVLFVPGNHDLW 121 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~-~~D~li~~GDi~~~~~~~~~~~~~l~~~----~~~v~~V~GNHD~~ 121 (328)
..||++++||+|+......++++.+ ... ..|.+|+.||++|.+....+++..|..+ +..++++.||||..
T Consensus 211 ~~~~~~vigDiHG~~~~l~~~l~~~--~~~~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 211 ETEKITVCGDTHGQFYDLLNIFELN--GLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 285 (477)
T ss_dssp SSCEEEEECBCTTCHHHHHHHHHHH--CCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCcceEEEeCCCCCHHHHHHHHHHc--CCCCCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHH
Confidence 4699999999999876655666655 222 3467999999999987666666666543 56799999999954
No 42
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=98.29 E-value=1e-06 Score=82.83 Aligned_cols=70 Identities=16% Similarity=0.191 Sum_probs=53.4
Q ss_pred CCcEEEEEeCCCCCCcccHHHHHHHhhcCC-CCCEEEEcccccCCchhHHHHHHHHHhc----CCcEEEECCCCCCC
Q 042652 50 SGLRVFVLSDLHTDYSENMTWVKCLSTTRH-KKDVLLVAGDVAEKYDDFVLTMSLLKDR----FQRVLFVPGNHDLW 121 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~-~~D~li~~GDi~~~~~~~~~~~~~l~~~----~~~v~~V~GNHD~~ 121 (328)
.+||++++||+|+.+....++++.+ ... ..+.+|+.||++|.+..-.+++.+|..+ ...++++.||||..
T Consensus 62 ~~~ri~viGDIHG~~~~L~~ll~~~--g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 62 PDVKISVCGDTHGQFYDVLNLFRKF--GKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHH--CCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred cCceEEEEecCCCCHHHHHHHHHHc--CCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhh
Confidence 5799999999999987666666655 233 2356999999999987666666666543 35699999999954
No 43
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=98.22 E-value=1.3e-06 Score=80.94 Aligned_cols=68 Identities=18% Similarity=0.234 Sum_probs=52.7
Q ss_pred cEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhc----CCcEEEECCCCCCC
Q 042652 52 LRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDR----FQRVLFVPGNHDLW 121 (328)
Q Consensus 52 ~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~----~~~v~~V~GNHD~~ 121 (328)
++|+++||+|+.+....++++.. .....|.+++.||++|.+....+++.+|..+ ...++++.||||..
T Consensus 56 ~~i~viGDIHG~~~~L~~ll~~~--g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 56 APLKICGDIHGQYYDLLRLFEYG--GFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHH--CSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CCEEEEecCCCCHHHHHHHHHHh--CCCCCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhh
Confidence 57999999999987666666655 4456688999999999987666666666533 45799999999964
No 44
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.22 E-value=1.2e-05 Score=81.06 Aligned_cols=69 Identities=19% Similarity=0.217 Sum_probs=46.0
Q ss_pred CcEEEEEeCCCCCCcc---------------------cHHHHHHHhhcCCCCC-EEEEcccccCCch-----hHHHHHHH
Q 042652 51 GLRVFVLSDLHTDYSE---------------------NMTWVKCLSTTRHKKD-VLLVAGDVAEKYD-----DFVLTMSL 103 (328)
Q Consensus 51 ~~ri~~iSDlH~~~~~---------------------~~~~l~~l~~~~~~~D-~li~~GDi~~~~~-----~~~~~~~~ 103 (328)
.++|+++||+|..... ...+++.++ ...++ +++.+||+++... .-+..++.
T Consensus 12 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r--~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 89 (579)
T 3ztv_A 12 ELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLR--KKYKNPLVLHAGDAITGTLYFTLFGGSADAAV 89 (579)
T ss_dssp EEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHH--HHSSSEEEEECSCCSCSSHHHHTTTTHHHHHH
T ss_pred EEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHH--hhCCCEEEEeCCCCCCCceeeeecCCHHHHHH
Confidence 5899999999975422 123455553 23344 8899999998642 12456677
Q ss_pred HHhcCCcEEEECCCCCCCC
Q 042652 104 LKDRFQRVLFVPGNHDLWC 122 (328)
Q Consensus 104 l~~~~~~v~~V~GNHD~~~ 122 (328)
|..++.- ++++|||||..
T Consensus 90 ln~lg~D-~~tlGNHEfd~ 107 (579)
T 3ztv_A 90 MNAGNFH-YFTLGNHEFDA 107 (579)
T ss_dssp HHHHTCS-EEECCSGGGTT
T ss_pred HHhcCcC-eeecccccccc
Confidence 7776544 47789999864
No 45
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=98.14 E-value=2.4e-06 Score=80.83 Aligned_cols=68 Identities=18% Similarity=0.175 Sum_probs=52.7
Q ss_pred cEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhc----CCcEEEECCCCCCC
Q 042652 52 LRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDR----FQRVLFVPGNHDLW 121 (328)
Q Consensus 52 ~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~----~~~v~~V~GNHD~~ 121 (328)
++|+++||+|+.+....++++.. .....|.+++.||++|.+....+++.+|..+ ...++++.||||..
T Consensus 70 ~pi~ViGDIHG~~~dL~~ll~~~--g~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQFFDLMKLFEVG--GSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHH--CCTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCHHHHHHHHHhc--CCCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 67999999999887666666654 4556789999999999987666666666443 45699999999964
No 46
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=98.07 E-value=2.9e-06 Score=83.57 Aligned_cols=69 Identities=17% Similarity=0.173 Sum_probs=52.8
Q ss_pred CcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhc----CCcEEEECCCCCCC
Q 042652 51 GLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDR----FQRVLFVPGNHDLW 121 (328)
Q Consensus 51 ~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~----~~~v~~V~GNHD~~ 121 (328)
.+++++++|+|+.+....++++.. .....|.+|+.||++|.+..-.+++.+|..+ ...++++.||||..
T Consensus 82 ~~pI~VIGDIHGq~~dL~~LL~~~--g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 82 DAPVTVCGDIHGQFFDLMKLFEVG--GSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHH--CCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCCHHHHHHHHHhc--CCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 478999999999887655666532 3455789999999999987666666666543 35699999999964
No 47
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=97.84 E-value=9.2e-05 Score=74.29 Aligned_cols=76 Identities=17% Similarity=0.280 Sum_probs=48.6
Q ss_pred CCCCCcEEEEEeCCCCCCcc-------------cHHHHHHHhh--cCCCCC-EEEEcccccCCch-------hHHHHHHH
Q 042652 47 TSASGLRVFVLSDLHTDYSE-------------NMTWVKCLST--TRHKKD-VLLVAGDVAEKYD-------DFVLTMSL 103 (328)
Q Consensus 47 ~~~~~~ri~~iSDlH~~~~~-------------~~~~l~~l~~--~~~~~D-~li~~GDi~~~~~-------~~~~~~~~ 103 (328)
.....++|++++|+|..... ...+...++. .+.++| +++.+||+.+... .-+..++.
T Consensus 11 ~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ 90 (557)
T 3c9f_A 11 LTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPI 90 (557)
T ss_dssp CCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHH
T ss_pred CCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHH
Confidence 44567999999999985421 1223333321 135677 5799999997632 12345677
Q ss_pred HHhcCCcEEEECCCCCCCCC
Q 042652 104 LKDRFQRVLFVPGNHDLWCR 123 (328)
Q Consensus 104 l~~~~~~v~~V~GNHD~~~~ 123 (328)
|..++.- +++.||||+..+
T Consensus 91 ln~lg~D-a~tlGNHEfD~G 109 (557)
T 3c9f_A 91 FIKQDYD-LLTIGNHELYLW 109 (557)
T ss_dssp HTTSCCS-EECCCGGGSSSH
T ss_pred HHhcCCC-EEeecchhcccc
Confidence 7777544 567899999754
No 48
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=97.58 E-value=0.0034 Score=62.40 Aligned_cols=41 Identities=17% Similarity=0.111 Sum_probs=30.1
Q ss_pred CCCcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccC
Q 042652 49 ASGLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAE 92 (328)
Q Consensus 49 ~~~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~ 92 (328)
...+||+++||.+...... ..++.+ ...++|++|++||++.
T Consensus 114 ~~~~rfa~~sc~~~~~g~~-~~~~~i--a~~~~D~vlhlGD~iY 154 (527)
T 2yeq_A 114 VPQMTFAFASCQQYEHGYY-TAYKHM--AKEKLDLVFHLGDYIY 154 (527)
T ss_dssp CCCEEEEEECCCCGGGCCC-HHHHHH--TTSCCSEEEECSCSSC
T ss_pred CCCeEEEEEecCCCCCCcc-HHHHHH--HhcCCCEEEecCCccc
Confidence 3579999999999743322 234555 3468999999999984
No 49
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=97.50 E-value=0.00075 Score=66.01 Aligned_cols=133 Identities=13% Similarity=0.093 Sum_probs=75.6
Q ss_pred cceeeeceeecCCcccC-C--CCCCCcEEEEEeCCCCCCcc-c-----HHHHHHHhh---------cCCCCCEEEEcccc
Q 042652 29 YTTTRRPEILTSSAAAS-S--TSASGLRVFVLSDLHTDYSE-N-----MTWVKCLST---------TRHKKDVLLVAGDV 90 (328)
Q Consensus 29 ~~~v~~~~i~~~~~~~~-~--~~~~~~ri~~iSDlH~~~~~-~-----~~~l~~l~~---------~~~~~D~li~~GDi 90 (328)
.+.+.-.+|..|.+|.. . ...+..+|+++||||++... . +.+++-|.. ...++..||+|||+
T Consensus 175 ~G~F~V~di~~Pd~ppq~~~~~~~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~ 254 (476)
T 3e0j_A 175 DGKFLVEDYCFADLAPQKPAPPLDTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNL 254 (476)
T ss_dssp TSSEEEEEEEECBCCCCCCCCCCSSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCS
T ss_pred CCeEEEEEEEcCCCCCCCCCCcCCCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCc
Confidence 44444446677777611 1 12346789999999998752 1 122333321 23468899999999
Q ss_pred cCCc----------------------hhHHHHHHHHHhc--CCcEEEECCCCCCCCCCCCCc-hhhH-HHHHHHHHhccc
Q 042652 91 AEKY----------------------DDFVLTMSLLKDR--FQRVLFVPGNHDLWCRGEEND-FPDS-LEKLNKLLDACR 144 (328)
Q Consensus 91 ~~~~----------------------~~~~~~~~~l~~~--~~~v~~V~GNHD~~~~~~~~~-~~~~-~~~~~~l~~~~~ 144 (328)
.+.. ..++.+-++|+++ ..||.++|||||.-.....+. +-.. +.+...+ .
T Consensus 255 v~~~~~~~e~~~~~~y~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~----~ 330 (476)
T 3e0j_A 255 LSHSTQSRDSINKAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAY----S 330 (476)
T ss_dssp BCC-------------CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTS----T
T ss_pred cccccccchhhhhhhccccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhc----C
Confidence 8762 1233444555554 579999999999765443221 1111 1111111 1
Q ss_pred ccccccc--eEEEcCEEEeccCC
Q 042652 145 GLGVEIN--PVVIDGLGIIPLFS 165 (328)
Q Consensus 145 ~l~v~~~--~~~i~g~~iiG~~~ 165 (328)
.+...++ .+.++|++|+|..|
T Consensus 331 ~~~~vtNP~~~~i~G~~~LgtsG 353 (476)
T 3e0j_A 331 TLQLVTNPYQATIDGVRFLGTSG 353 (476)
T ss_dssp TEEECCSSEEEEETTEEEEECSS
T ss_pred ccEEeCCCeEEEECCEEEEEECC
Confidence 1222233 46789999999865
No 50
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=97.43 E-value=0.00026 Score=64.82 Aligned_cols=72 Identities=14% Similarity=0.190 Sum_probs=46.9
Q ss_pred CCcEEEEEeCCCCCCcc--cHHHHHHHhhcCCCCCEEEEcccccCCch-hHHHHHHHHHhcCCcEEEECCCCCCCCC
Q 042652 50 SGLRVFVLSDLHTDYSE--NMTWVKCLSTTRHKKDVLLVAGDVAEKYD-DFVLTMSLLKDRFQRVLFVPGNHDLWCR 123 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~--~~~~l~~l~~~~~~~D~li~~GDi~~~~~-~~~~~~~~l~~~~~~v~~V~GNHD~~~~ 123 (328)
..|||++++|+|..... ....++.+++ +.++|++++.||-...+. --....+.|..++.-+.. .|||+|..+
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~-~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~Da~T-lGNHefD~g 77 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKS-KYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNYIT-MGNHTWFQK 77 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHH-HHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCCEEE-CCTTTTCCG
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHH-hcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCCEEE-EccCcccCC
Confidence 45999999999965321 1233555532 225799999999876431 124566777777665554 499999764
No 51
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.36 E-value=0.0015 Score=58.80 Aligned_cols=68 Identities=16% Similarity=0.193 Sum_probs=43.8
Q ss_pred cEEEEEeCCCC--CCcccHHHHHHHhhcCCCCCEEEEccc-ccCCchhHHHHHHHHHhcCCcEEEECCCCCCCCC
Q 042652 52 LRVFVLSDLHT--DYSENMTWVKCLSTTRHKKDVLLVAGD-VAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLWCR 123 (328)
Q Consensus 52 ~ri~~iSDlH~--~~~~~~~~l~~l~~~~~~~D~li~~GD-i~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~~~ 123 (328)
|||+++.|+=. +.......++.++ +.. |++|+.|. .+....--+...+.|.+++.-++ ..|||+|...
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr--~~~-d~vi~ngen~~~G~g~~~~~~~~l~~~G~D~~-T~GNHefD~~ 71 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIR--DRY-DLVIANGENAARGKGLDRRSYRLLREAGVDLV-SLGNHAWDHK 71 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHG--GGC-SEEEEECTTTTTTSSCCHHHHHHHHHHTCCEE-ECCTTTTSCT
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHH--hhC-CEEEEeCCCccCCCCcCHHHHHHHHhCCCCEE-EeccEeeECc
Confidence 89999999955 3333455677764 333 87776555 44432111456677777777775 6699999763
No 52
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.34 E-value=0.0015 Score=58.90 Aligned_cols=67 Identities=13% Similarity=0.051 Sum_probs=43.9
Q ss_pred cEEEEEeCCCCCC--cccHHHHHHHhhcCCCCCEEEEcccccCCch-hHHHHHHHHHhcCCcEEEECCCCCCCC
Q 042652 52 LRVFVLSDLHTDY--SENMTWVKCLSTTRHKKDVLLVAGDVAEKYD-DFVLTMSLLKDRFQRVLFVPGNHDLWC 122 (328)
Q Consensus 52 ~ri~~iSDlH~~~--~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~-~~~~~~~~l~~~~~~v~~V~GNHD~~~ 122 (328)
|||+++.|+=... ......++.++ +.. |++|+.|+-...+. -.....+.|..++.-++.+ |||+|..
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr--~~~-d~vi~nge~~~~G~g~~~~~~~~l~~~G~Da~Tl-GNHefD~ 70 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIR--PQF-DFVIVNMENSAGGFGMHRDAARGALEAGAGCLTL-GNHAWHH 70 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHG--GGC-SEEEEECTBTTTTSSCCHHHHHHHHHHTCSEEEC-CTTTTSS
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHH--hhC-CEEEECCCCccCCcCCCHHHHHHHHhCCCCEEEe-ccccccC
Confidence 8999999996433 23345566663 333 99888887665431 1145567777776666555 9999975
No 53
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=97.20 E-value=0.00026 Score=70.81 Aligned_cols=71 Identities=18% Similarity=0.149 Sum_probs=47.5
Q ss_pred CCcEEEEEeCCCCCCcc--------------------cHHHHHHHhhcCCCCCEEEEcccccCCch-----hHHHHHHHH
Q 042652 50 SGLRVFVLSDLHTDYSE--------------------NMTWVKCLSTTRHKKDVLLVAGDVAEKYD-----DFVLTMSLL 104 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~--------------------~~~~l~~l~~~~~~~D~li~~GDi~~~~~-----~~~~~~~~l 104 (328)
..++|+++||+|..... ...+++.++. ....++++.+||+++... .-...++.|
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~-~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRR-AEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHH-HCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHh-hCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 35899999999974321 1234555532 222369999999998752 124566777
Q ss_pred HhcCCcEEEECCCCCCCC
Q 042652 105 KDRFQRVLFVPGNHDLWC 122 (328)
Q Consensus 105 ~~~~~~v~~V~GNHD~~~ 122 (328)
..++.. ++++|||||..
T Consensus 103 n~lg~d-~~~~GNHEfd~ 119 (546)
T 4h2g_A 103 NALRYD-AMALGNHEFDN 119 (546)
T ss_dssp HHHTCS-EEECCGGGGTT
T ss_pred HhcCCc-EEeccCccccc
Confidence 777544 57889999854
No 54
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=96.34 E-value=0.0084 Score=56.27 Aligned_cols=72 Identities=19% Similarity=0.244 Sum_probs=45.6
Q ss_pred CCcEEEEEeCCCCCCcc----------------cHHHHHHHhhcCCCCCEEEEcccccCCchh--H-----------HHH
Q 042652 50 SGLRVFVLSDLHTDYSE----------------NMTWVKCLSTTRHKKDVLLVAGDVAEKYDD--F-----------VLT 100 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~----------------~~~~l~~l~~~~~~~D~li~~GDi~~~~~~--~-----------~~~ 100 (328)
..++|+++||+|..... ...+++.++. .....+++.+||+.+...- + ...
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~-~~~n~llld~GD~~qGs~~~~~~~~~~~~~g~~~p~ 85 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARA-EVKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPV 85 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHH-TCSCEEEEECSCCSSSSHHHHHHHHHCCCTTCCCHH
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHh-hCCCEEEEECCCCCCCchhHHhhhhcccccccchHH
Confidence 35899999999985421 1235666642 2223478899999976421 1 134
Q ss_pred HHHHHhcCCcEEEECCCCCCCCC
Q 042652 101 MSLLKDRFQRVLFVPGNHDLWCR 123 (328)
Q Consensus 101 ~~~l~~~~~~v~~V~GNHD~~~~ 123 (328)
++.|..++.- ++++|||||..+
T Consensus 86 ~~~mn~lg~D-~~t~GNHEfd~G 107 (339)
T 3jyf_A 86 YKAMNTLNYA-VGNLGNHEFNYG 107 (339)
T ss_dssp HHHHTTSCCS-EEECCGGGGTTC
T ss_pred HHHHHhcCCC-EEecchhhhhcc
Confidence 5666666544 456799998754
No 55
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=96.30 E-value=0.0047 Score=58.01 Aligned_cols=71 Identities=14% Similarity=0.258 Sum_probs=44.9
Q ss_pred CcEEEEEeCCCCCCcc----------------cHHHHHHHhhcCCCCCEEEEcccccCCch--hH---------------
Q 042652 51 GLRVFVLSDLHTDYSE----------------NMTWVKCLSTTRHKKDVLLVAGDVAEKYD--DF--------------- 97 (328)
Q Consensus 51 ~~ri~~iSDlH~~~~~----------------~~~~l~~l~~~~~~~D~li~~GDi~~~~~--~~--------------- 97 (328)
.++|+++||+|..... ...+++.++. .....++|.+||++.... .+
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~-~~~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~g~~ 89 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHRE-QNPNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKT 89 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHH-HCSSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSC
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHh-cCCCEEEEecCccCCCcHHHHHhhhcccccccccccc
Confidence 5889999999986421 1234555542 222346788999997642 11
Q ss_pred HHHHHHHHhcCCcEEEECCCCCCCCC
Q 042652 98 VLTMSLLKDRFQRVLFVPGNHDLWCR 123 (328)
Q Consensus 98 ~~~~~~l~~~~~~v~~V~GNHD~~~~ 123 (328)
...++.|..++.- ++++|||||..+
T Consensus 90 ~~~~~~ln~lg~D-a~tlGNHEfd~G 114 (341)
T 3gve_A 90 HPIISVMNALKYD-AGTLGNHEFNYG 114 (341)
T ss_dssp CHHHHHHHHTTCC-BEECCGGGGTTC
T ss_pred cHHHHHHHhhCCC-eeeccchhhccC
Confidence 1355666666443 467899999764
No 56
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=94.83 E-value=0.027 Score=55.75 Aligned_cols=69 Identities=20% Similarity=0.178 Sum_probs=43.4
Q ss_pred cEEEEEeCCCCCCcc--------------------cHHHHHHHhhcCCCC-CEEEEcccccCCch-----hHHHHHHHHH
Q 042652 52 LRVFVLSDLHTDYSE--------------------NMTWVKCLSTTRHKK-DVLLVAGDVAEKYD-----DFVLTMSLLK 105 (328)
Q Consensus 52 ~ri~~iSDlH~~~~~--------------------~~~~l~~l~~~~~~~-D~li~~GDi~~~~~-----~~~~~~~~l~ 105 (328)
++|++++|+|..... ...++++++ +.++ -+++-+||+..... .-+..++.+.
T Consensus 4 LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r--~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN 81 (530)
T 4h1s_A 4 LTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIR--RAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMN 81 (530)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHH--HHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHH
T ss_pred EEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHH--hhCcCeEEEEeCCcccchHHHHHhCChHHHHHHh
Confidence 789999999964321 113355553 2233 46777999998642 1244556666
Q ss_pred hcCCcEEEECCCCCCCCC
Q 042652 106 DRFQRVLFVPGNHDLWCR 123 (328)
Q Consensus 106 ~~~~~v~~V~GNHD~~~~ 123 (328)
.++. =.+++|||||..+
T Consensus 82 ~lgy-Da~~lGNHEFd~G 98 (530)
T 4h1s_A 82 ALRY-DAMALGNHEFDNG 98 (530)
T ss_dssp HTTC-CEEECCGGGGTTT
T ss_pred ccCC-CEEEEchhhhccC
Confidence 6543 3567899999654
No 57
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=93.57 E-value=0.18 Score=48.96 Aligned_cols=71 Identities=17% Similarity=0.236 Sum_probs=47.9
Q ss_pred CCcEEEEEeCCCCCCcc-----cHHHHHHHhhcC-CCCCEEEEcccccCCch-------------------hHHHHHH--
Q 042652 50 SGLRVFVLSDLHTDYSE-----NMTWVKCLSTTR-HKKDVLLVAGDVAEKYD-------------------DFVLTMS-- 102 (328)
Q Consensus 50 ~~~ri~~iSDlH~~~~~-----~~~~l~~l~~~~-~~~D~li~~GDi~~~~~-------------------~~~~~~~-- 102 (328)
..++|+++|.-+..... ..++++.+ +. .+||+||++|.+.|... .++.+.+
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v--~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~ 223 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSI--NNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKL 223 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHC--CCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHH--HhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHH
Confidence 57999999999986542 23455555 44 47999999999987531 1233332
Q ss_pred ---HHHhc--CCcEEEECCCCCCCC
Q 042652 103 ---LLKDR--FQRVLFVPGNHDLWC 122 (328)
Q Consensus 103 ---~l~~~--~~~v~~V~GNHD~~~ 122 (328)
.+++. ...|++|||+||...
T Consensus 224 i~~il~~l~~~t~VVlVPS~rD~~~ 248 (460)
T 3flo_A 224 FTPILKTISPHIQTVLIPSTKDAIS 248 (460)
T ss_dssp THHHHTTSCTTSEEEEECCTTBTTC
T ss_pred HHHHHHhccCCCEEEEeCCcccccC
Confidence 23333 357999999999864
No 58
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=61.85 E-value=16 Score=32.10 Aligned_cols=52 Identities=12% Similarity=0.137 Sum_probs=39.4
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCCCC
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLWC 122 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~~ 122 (328)
+.++.+ .....|+|++.|...-..++...+++.+++...|++..|||.|-..
T Consensus 27 ~~l~~~--~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~~~~Piil~p~~~~~~~ 78 (235)
T 3w01_A 27 DDLDAI--CMSQTDAIMIGGTDDVTEDNVIHLMSKIRRYPLPLVLEISNIESVM 78 (235)
T ss_dssp HHHHHH--HTSSCSEEEECCSSCCCHHHHHHHHHHHTTSCSCEEEECCCSTTCC
T ss_pred HHHHHH--HHcCCCEEEECCcCCcCHHHHHHHHHHhcCcCCCEEEecCCHHHhh
Confidence 345555 4667899999997655556677788888876779999999997554
No 59
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=52.93 E-value=18 Score=31.46 Aligned_cols=51 Identities=12% Similarity=0.158 Sum_probs=38.1
Q ss_pred HHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCCCC
Q 042652 70 WVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDLWC 122 (328)
Q Consensus 70 ~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~~ 122 (328)
.++.+ .....|++++.|=..-..++...+++.+++...|++..|||.+-..
T Consensus 23 ~~~~~--~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~~~~Pvvlfp~~~~~v~ 73 (228)
T 3vzx_A 23 QLEIL--CESGTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPCVLEVSAIEAIV 73 (228)
T ss_dssp HHHHH--HTSSCSEEEECCCSCCCHHHHHHHHHHHTTSSSCEEEECSCGGGCC
T ss_pred HHHHH--HHcCCCEEEECCcCCCCHHHHHHHHHHhhccCCCEEEeCCCHHHcc
Confidence 45555 4667999999995533456677777888777789999999998554
No 60
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=50.91 E-value=20 Score=25.68 Aligned_cols=48 Identities=27% Similarity=0.162 Sum_probs=32.3
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCC
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDL 120 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~ 120 (328)
..++.+ ...+.-+||+|.|... +-...+..+....+.|+++++++-|+
T Consensus 18 ~v~kai--~~gkaklViiA~D~~~--~~~~~i~~lc~~~~Ip~~~v~sk~eL 65 (82)
T 3v7e_A 18 QTVKAL--KRGSVKEVVVAKDADP--ILTSSVVSLAEDQGISVSMVESMKKL 65 (82)
T ss_dssp HHHHHH--TTTCEEEEEEETTSCH--HHHHHHHHHHHHHTCCEEEESCHHHH
T ss_pred HHHHHH--HcCCeeEEEEeCCCCH--HHHHHHHHHHHHcCCCEEEECCHHHH
Confidence 345566 5678899999999975 22233334445568999999766443
No 61
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=40.86 E-value=16 Score=33.72 Aligned_cols=26 Identities=27% Similarity=0.505 Sum_probs=19.7
Q ss_pred CccEEEEcccccCCc--------------eEECCEEEEec
Q 042652 233 TSACHVFGHTHFSWD--------------AVLDGIRYVQA 258 (328)
Q Consensus 233 ~v~~~i~GH~H~~~~--------------~~~~g~~~v~~ 258 (328)
+++++|.||+|.... .+++|+.++++
T Consensus 234 gID~IlgGHsH~~~~~~~~~~~~g~~~~~g~vn~v~vvqa 273 (339)
T 3jyf_A 234 GVDAIMFGHAHAVFPGKDFANIKGADIAKGTLNGVPAVMP 273 (339)
T ss_dssp TCCEEEECSSCSEESSGGGTTSTTEETTTTEETTEEEEEE
T ss_pred CCCEEEeCCCccccccccccccCCccccCccCCCEEEEcC
Confidence 699999999998542 25678777654
No 62
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=38.12 E-value=19 Score=33.14 Aligned_cols=26 Identities=23% Similarity=0.340 Sum_probs=19.6
Q ss_pred CccEEEEcccccCCc--------------eEECCEEEEec
Q 042652 233 TSACHVFGHTHFSWD--------------AVLDGIRYVQA 258 (328)
Q Consensus 233 ~v~~~i~GH~H~~~~--------------~~~~g~~~v~~ 258 (328)
+++++|.||+|.... ..++|+.++++
T Consensus 241 giD~IigGHsH~~~~~~~~~~~~~~~~~~g~v~~~~vvqa 280 (341)
T 3gve_A 241 GIDAIISGHQHGLFPSAEYAGVAQFNVEKGTINGIPVVMP 280 (341)
T ss_dssp CCCEEEECSSCCEESCGGGTTSTTEETTTTEETTEEEEEE
T ss_pred CCcEEEECCCCccCCCcccccccccccccccCCCEEEEeC
Confidence 699999999998642 25678777764
No 63
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=35.55 E-value=60 Score=24.94 Aligned_cols=69 Identities=17% Similarity=0.160 Sum_probs=40.5
Q ss_pred CCCCcEEEEEeCCCCCCccc------------------HHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCC
Q 042652 48 SASGLRVFVLSDLHTDYSEN------------------MTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQ 109 (328)
Q Consensus 48 ~~~~~ri~~iSDlH~~~~~~------------------~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~ 109 (328)
+...|||+++=|-..-.... .+.++.+ ....+|++++ |+.=.+-+-.++++.+++...
T Consensus 5 ~~r~~rILiVdD~~~~~~~l~~~L~~~G~~v~~~a~~g~eAl~~~--~~~~~Dlvll--Di~mP~~~G~el~~~lr~~~i 80 (123)
T 2lpm_A 5 TERRLRVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEALDIA--RKGQFDIAII--DVNLDGEPSYPVADILAERNV 80 (123)
T ss_dssp CCCCCCEEEESSSTTTSHHHHHHHHHHCCCCCBCSCCHHHHHHHH--HHCCSSEEEE--CSSSSSCCSHHHHHHHHHTCC
T ss_pred CCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH--HhCCCCEEEE--ecCCCCCCHHHHHHHHHcCCC
Confidence 44568888888866533211 1233434 3567898887 553222111345566666678
Q ss_pred cEEEECCCCCC
Q 042652 110 RVLFVPGNHDL 120 (328)
Q Consensus 110 ~v~~V~GNHD~ 120 (328)
|++++-|+-|.
T Consensus 81 pvI~lTa~~~~ 91 (123)
T 2lpm_A 81 PFIFATGYGSK 91 (123)
T ss_dssp SSCCBCTTCTT
T ss_pred CEEEEecCccH
Confidence 88888886553
No 64
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=35.51 E-value=14 Score=32.50 Aligned_cols=26 Identities=15% Similarity=-0.083 Sum_probs=18.3
Q ss_pred CccEEEEcccccCCceEEC--CEEEEec
Q 042652 233 TSACHVFGHTHFSWDAVLD--GIRYVQA 258 (328)
Q Consensus 233 ~v~~~i~GH~H~~~~~~~~--g~~~v~~ 258 (328)
+.+.+||||+|...-...+ ++..+++
T Consensus 196 g~~~vvfGHt~~~~~~~~~~~~~i~IDt 223 (262)
T 2qjc_A 196 GPETVVFGHDARRGLQEQYKPLAIGLDS 223 (262)
T ss_dssp CSSEEEECCCGGGCCBCTTTTTEEECCC
T ss_pred CCCEEEECCCccccccccCCCCEEEeeC
Confidence 4678999999997545555 6555544
No 65
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=34.94 E-value=79 Score=23.77 Aligned_cols=41 Identities=12% Similarity=0.009 Sum_probs=25.7
Q ss_pred HHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEE
Q 042652 70 WVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFV 114 (328)
Q Consensus 70 ~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V 114 (328)
.++.+ ...++-+||+|.|.... ....+.......+.|++.+
T Consensus 29 v~kai--~~gka~lViiA~D~~~~--~~~~l~~~c~~~~Vp~~~~ 69 (110)
T 3cpq_A 29 TIKFV--KHGEGKLVVLAGNIPKD--LEEDVKYYAKLSNIPVYQH 69 (110)
T ss_dssp HHHHH--HTTCCSEEEECTTCBHH--HHHHHHHHHHHTTCCEEEC
T ss_pred HHHHH--HcCCceEEEEeCCCCHH--HHHHHHHHHHHcCCCEEEE
Confidence 44555 46788999999999322 1223333444557898776
No 66
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=34.69 E-value=64 Score=24.19 Aligned_cols=67 Identities=9% Similarity=0.150 Sum_probs=37.8
Q ss_pred CCCcEEEEEeCCCCCCccc-----------------HHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHh--c--
Q 042652 49 ASGLRVFVLSDLHTDYSEN-----------------MTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKD--R-- 107 (328)
Q Consensus 49 ~~~~ri~~iSDlH~~~~~~-----------------~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~--~-- 107 (328)
..+++|+++.|-....... .+.++.+ ....+|+||+--++.+. +...+++.+++ .
T Consensus 6 ~~~~~iLivd~~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l--~~~~~dlii~d~~l~~~--~g~~~~~~l~~~~~~~ 81 (147)
T 2zay_A 6 GKWWRIMLVDTQLPALAASISALSQEGFDIIQCGNAIEAVPVA--VKTHPHLIITEANMPKI--SGMDLFNSLKKNPQTA 81 (147)
T ss_dssp --CEEEEEECTTGGGGHHHHHHHHHHTEEEEEESSHHHHHHHH--HHHCCSEEEEESCCSSS--CHHHHHHHHHTSTTTT
T ss_pred CCCceEEEEeCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHH--HcCCCCEEEEcCCCCCC--CHHHHHHHHHcCcccC
Confidence 3567888887754332211 1233333 23468999996666542 22456666665 2
Q ss_pred CCcEEEECCCCC
Q 042652 108 FQRVLFVPGNHD 119 (328)
Q Consensus 108 ~~~v~~V~GNHD 119 (328)
..|++++-+..+
T Consensus 82 ~~pii~ls~~~~ 93 (147)
T 2zay_A 82 SIPVIALSGRAT 93 (147)
T ss_dssp TSCEEEEESSCC
T ss_pred CCCEEEEeCCCC
Confidence 468888877655
No 67
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=32.80 E-value=73 Score=24.11 Aligned_cols=68 Identities=18% Similarity=0.211 Sum_probs=41.5
Q ss_pred CCcEEEEEeCCCC--CC-------------cccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHH-hcCCc-EE
Q 042652 50 SGLRVFVLSDLHT--DY-------------SENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLK-DRFQR-VL 112 (328)
Q Consensus 50 ~~~ri~~iSDlH~--~~-------------~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~-~~~~~-v~ 112 (328)
..|||++|+|--. ++ .+..+.++.+. ...+..+|+++-++.+.. ...++.++ +...| ++
T Consensus 2 ~~mkiaVIgD~dtv~GFrLaGi~~~~v~~~ee~~~~~~~l~-~~~digIIlIte~~a~~i---~~~i~~~~~~~~~P~Il 77 (109)
T 2d00_A 2 VPVRMAVIADPETAQGFRLAGLEGYGASSAEEAQSLLETLV-ERGGYALVAVDEALLPDP---ERAVERLMRGRDLPVLL 77 (109)
T ss_dssp CCCCEEEEECHHHHHHHHHTTSEEEECSSHHHHHHHHHHHH-HHCCCSEEEEETTTCSCH---HHHHHHHTTCCCCCEEE
T ss_pred CccEEEEEeCHHHHHHHHHcCCeEEEeCCHHHHHHHHHHHh-hCCCeEEEEEeHHHHHhh---HHHHHHHHhCCCCeEEE
Confidence 3588999998321 00 01122344332 456889999999998864 34455554 33445 78
Q ss_pred EECCCCCCC
Q 042652 113 FVPGNHDLW 121 (328)
Q Consensus 113 ~V~GNHD~~ 121 (328)
-+|++|+-+
T Consensus 78 ~IPs~~~~~ 86 (109)
T 2d00_A 78 PIAGLKEAF 86 (109)
T ss_dssp EESCGGGGG
T ss_pred EECCCcccC
Confidence 899999644
No 68
>2kqs_B Death domain-associated protein 6; SUMO, SIM, DAXX, nucleus, phosphoprotein, UBL conjugation PA apoptosis, transcription, transcription regulation; NMR {Homo sapiens}
Probab=32.11 E-value=26 Score=19.61 Aligned_cols=16 Identities=25% Similarity=0.227 Sum_probs=12.8
Q ss_pred CCCCcEEEEEeCCCCC
Q 042652 48 SASGLRVFVLSDLHTD 63 (328)
Q Consensus 48 ~~~~~ri~~iSDlH~~ 63 (328)
+-++.+++++||+|..
T Consensus 9 qcdP~evivlsds~~~ 24 (26)
T 2kqs_B 9 QCDPEEIIVLSDSDXX 24 (26)
T ss_pred cCCcceEEEccccccc
Confidence 3457899999999974
No 69
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=30.99 E-value=84 Score=23.89 Aligned_cols=47 Identities=15% Similarity=0.038 Sum_probs=31.3
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCC
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHD 119 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD 119 (328)
..++.+ ...++-+||+|.|.... ....+.......+.|++.++|+-+
T Consensus 33 ~t~kai--~~gkakLVilA~D~~~~--~~~~i~~~c~~~~ipv~~~~~s~~ 79 (112)
T 3iz5_f 33 TVLKTL--RSSLGKLIILANNCPPL--RKSEIETYAMLAKISVHHFHGNNV 79 (112)
T ss_dssp HHHHHH--HTTCCSEEEECSCCCHH--HHHHHHHHHHHTTCCEECCCCTTC
T ss_pred HHHHHH--HcCCceEEEEeCCCCHH--HHHHHHHHHHHcCCcEEEeCCCHH
Confidence 345566 56789999999999642 223333444556889999866554
No 70
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.81 E-value=1e+02 Score=22.54 Aligned_cols=48 Identities=10% Similarity=-0.076 Sum_probs=29.1
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEE-CCCCCC
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFV-PGNHDL 120 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V-~GNHD~ 120 (328)
+.++.+ ...+.-+||+|.|.. .+....+.......+.|++.+ ..+-|+
T Consensus 22 ~v~kai--~~gka~lViiA~D~~--~~~~~~i~~~c~~~~ip~~~~~~s~~eL 70 (99)
T 3j21_Z 22 ETIRLA--KTGGAKLIIVAKNAP--KEIKDDIYYYAKLSDIPVYEFEGTSVEL 70 (99)
T ss_dssp HHHHHH--HHTCCSEEEEECCCC--HHHHHHHHHHHHHTTCCEEEECCCSCGG
T ss_pred HHHHHH--HcCCccEEEEeCCCC--HHHHHHHHHHHHHcCCCEEEeCCCHHHH
Confidence 345556 456789999999942 222233334445568898766 545554
No 71
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=30.26 E-value=68 Score=27.37 Aligned_cols=64 Identities=9% Similarity=0.032 Sum_probs=37.6
Q ss_pred CcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCC
Q 042652 51 GLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGN 117 (328)
Q Consensus 51 ~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GN 117 (328)
++.+.+. +.+.+.....+.++.+ ...++|.||+.+--..........++.+.+.+.|++++-..
T Consensus 45 g~~~~~~-~~~~~~~~~~~~~~~l--~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 108 (298)
T 3tb6_A 45 GYSMLLT-STNNNPDNERRGLENL--LSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINAS 108 (298)
T ss_dssp TCEEEEE-ECTTCHHHHHHHHHHH--HHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSC
T ss_pred CCEEEEE-eCCCChHHHHHHHHHH--HHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEecC
Confidence 4555543 3443333334556665 45789999998743321112245667777778999988443
No 72
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=28.65 E-value=60 Score=25.29 Aligned_cols=48 Identities=17% Similarity=0.232 Sum_probs=32.1
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHH-HHHHhcCCcEEEECCCCCC
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTM-SLLKDRFQRVLFVPGNHDL 120 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~-~~l~~~~~~v~~V~GNHD~ 120 (328)
..++.+ ...++-++|+|.|.... .+...+ .+....+.|++++++|-++
T Consensus 31 ~v~Kai--~~gka~LViiA~D~~p~--~~~~~i~~lc~~~~Ip~~~v~sk~~L 79 (126)
T 2xzm_U 31 EVLRTI--EAKQALFVCVAEDCDQG--NYVKLVKALCAKNEIKYVSVPKRASL 79 (126)
T ss_dssp HHHHHH--HHTCCSEEEEESSCCST--THHHHHHHHHHHTTCCEEEESCSHHH
T ss_pred HHHHHH--HcCCceEEEEeCCCChH--HHHHHHHHHHHHhCCCEEEECCHHHH
Confidence 345555 45688999999998642 223333 4445568999999877664
No 73
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=28.43 E-value=75 Score=24.36 Aligned_cols=39 Identities=13% Similarity=0.294 Sum_probs=27.5
Q ss_pred CCCEEEEcccccCCchhHHHHHHHHHhcCCc-EEEECCCCCCC
Q 042652 80 KKDVLLVAGDVAEKYDDFVLTMSLLKDRFQR-VLFVPGNHDLW 121 (328)
Q Consensus 80 ~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~-v~~V~GNHD~~ 121 (328)
+..+|+++=++.+... ..++.+++...| ++-||++|--+
T Consensus 44 digIIlIte~ia~~i~---~~i~~~~~~~~P~IveIPs~~g~~ 83 (115)
T 3aon_B 44 EYGVIYITEQCANLVP---ETIERYKGQLTPAIILIPSHQGTL 83 (115)
T ss_dssp TEEEEEEEHHHHTTCH---HHHHHHHTSSSCEEEEECBTTBCC
T ss_pred CceEEEEeHHHHHHhH---HHHHHHhCCCCCEEEEECCCCCCC
Confidence 7889999999988754 234445554345 78899998654
No 74
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=28.11 E-value=98 Score=26.50 Aligned_cols=60 Identities=15% Similarity=0.081 Sum_probs=35.7
Q ss_pred CcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEEC
Q 042652 51 GLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVP 115 (328)
Q Consensus 51 ~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~ 115 (328)
++++.++.+...+.......++.+ ...++|.||+.+-- .......++.+.+.+.|++++-
T Consensus 34 g~~~~~~~~~~~~~~~~~~~~~~l--~~~~vdgiii~~~~---~~~~~~~~~~~~~~~ipvV~~~ 93 (303)
T 3d02_A 34 NLNASQVGPSSTDAPQQVKIIEDL--IARKVDAITIVPND---ANVLEPVFKKARDAGIVVLTNE 93 (303)
T ss_dssp TEEEEEECCSSSCHHHHHHHHHHH--HHTTCSEEEECCSC---HHHHHHHHHHHHHTTCEEEEES
T ss_pred CCEEEEECCCCCCHHHHHHHHHHH--HHcCCCEEEEecCC---hHHHHHHHHHHHHCCCeEEEEe
Confidence 466665555544433333455555 34679999998742 1223345566666778988873
No 75
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=27.84 E-value=93 Score=26.75 Aligned_cols=61 Identities=10% Similarity=0.030 Sum_probs=38.7
Q ss_pred CcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECC
Q 042652 51 GLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPG 116 (328)
Q Consensus 51 ~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~G 116 (328)
++.+.++.+...+.....+.++.+ ...++|.||+.+--.. .....++.+.+.+.|++++-.
T Consensus 34 g~~~~~~~~~~~~~~~~~~~i~~l--~~~~vdgiIi~~~~~~---~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 34 NVTVEYRGAAQYDIQEQITVLEQA--IAKNPAGIAISAIDPV---ELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp TCEEEEEECSSSCHHHHHHHHHHH--HHHCCSEEEECCSSTT---TTHHHHHHHHHTTCCEEEESS
T ss_pred CCEEEEeCCCcCCHHHHHHHHHHH--HHhCCCEEEEcCCCHH---HHHHHHHHHHHCCCcEEEECC
Confidence 567776566665554444556655 3468999999873222 224456777777889988743
No 76
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=27.72 E-value=1.1e+02 Score=22.38 Aligned_cols=41 Identities=10% Similarity=-0.001 Sum_probs=25.1
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHH-HHHHhcCCcEEEE
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTM-SLLKDRFQRVLFV 114 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~-~~l~~~~~~v~~V 114 (328)
+.++.+ ...+.-+||+|.|.. .+....+ ......+.|++.+
T Consensus 23 ~v~kai--~~gka~lViiA~D~~---~~~~~~l~~~c~~~~vp~~~~ 64 (101)
T 1w41_A 23 KSIQYA--KMGGAKLIIVARNAR---PDIKEDIEYYARLSGIPVYEF 64 (101)
T ss_dssp HHHHHH--HHTCCSEEEEETTSC---HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHH--HcCCCcEEEEeCCCC---HHHHHHHHHHHHhcCCCEEEe
Confidence 344555 456789999999932 2233333 3344457898775
No 77
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=26.88 E-value=1e+02 Score=26.10 Aligned_cols=56 Identities=16% Similarity=0.147 Sum_probs=35.8
Q ss_pred CcEEEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEEC
Q 042652 51 GLRVFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVP 115 (328)
Q Consensus 51 ~~ri~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~ 115 (328)
++++.+. +.+.+.....+.++.+ ...++|.||+.+--. ...++.+.+.+.|++++-
T Consensus 37 g~~~~~~-~~~~~~~~~~~~~~~l--~~~~vdgiIi~~~~~------~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 37 GYIGVLF-DANADIEREKTLLRAI--GSRGFDGLILQSFSN------PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp TCEEEEE-ECTTCHHHHHHHHHHH--HTTTCSEEEEESSCC------HHHHHHHHTTSSCEEEES
T ss_pred CCEEEEE-eCCCCHHHHHHHHHHH--HhCCCCEEEEecCCc------HHHHHHHHHCCCCEEEEe
Confidence 5665543 3343333334556666 567899999987543 346677777788998883
No 78
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=26.67 E-value=73 Score=24.41 Aligned_cols=48 Identities=25% Similarity=0.310 Sum_probs=33.3
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHH-HHHHhcCCcEEEECCCCCC
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTM-SLLKDRFQRVLFVPGNHDL 120 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~-~~l~~~~~~v~~V~GNHD~ 120 (328)
..++.+ ...+.-+||+|+|.... ++...+ .++.+.+.|+++|.+.-++
T Consensus 32 ~v~kaI--~~gka~LVvIA~D~~p~--~i~~~l~~lC~~~~VP~~~v~sk~~L 80 (113)
T 3jyw_G 32 HVVALI--ENKKAKLVLIANDVDPI--ELVVFLPALCKKMGVPYAIVKGKARL 80 (113)
T ss_dssp HHHHTT--TTTCCSEEEECSCCSSH--HHHTTHHHHHHHTTCCCEECSCSTTT
T ss_pred HHHHHH--HcCCceEEEEeCCCCHH--HHHHHHHHHHHHcCCCEEEECCHHHH
Confidence 345556 56789999999999542 222333 4455668999999988775
No 79
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=26.64 E-value=92 Score=22.99 Aligned_cols=47 Identities=9% Similarity=-0.050 Sum_probs=30.7
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCC
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHD 119 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD 119 (328)
+.++.+ ...++-+||+|.|..... ...+.......+.|++.+..+-|
T Consensus 26 ~v~kai--~~gka~lViiA~D~~~~~--~~~i~~~c~~~~vp~~~~~s~~e 72 (101)
T 3v7q_A 26 LVIKEI--RNARAKLVLLTEDASSNT--AKKVTDKCNYYKVPYKKVESRAV 72 (101)
T ss_dssp HHHHHH--HTTCCSEEEEETTSCHHH--HHHHHHHHHHTTCCEEEESCHHH
T ss_pred hhHHHH--hcCceeEEEEeccccccc--hhhhcccccccCCCeeeechHHH
Confidence 345556 567899999999997642 23333445556889998843333
No 80
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=26.63 E-value=1e+02 Score=22.64 Aligned_cols=47 Identities=11% Similarity=0.014 Sum_probs=30.7
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCC
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHD 119 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD 119 (328)
+.++.+ ...++-+||+|.|..... ...+.......+.|++++..+-|
T Consensus 25 ~v~kai--~~gka~lViiA~D~~~~~--~~~i~~~c~~~~ip~~~~~s~~e 71 (101)
T 3on1_A 25 QVVKAV--QNGQVTLVILSSDAGIHT--KKKLLDKCGSYQIPVKVVGNRQM 71 (101)
T ss_dssp HHHHHH--HTTCCSEEEEETTSCHHH--HHHHHHHHHHHTCCEEEESCHHH
T ss_pred HHHHHH--HcCCCcEEEEeCCCCHHH--HHHHHHHHHHcCCCEEEeCCHHH
Confidence 345556 567899999999997642 23334445556889988744333
No 81
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=25.76 E-value=92 Score=23.89 Aligned_cols=49 Identities=27% Similarity=0.392 Sum_probs=31.7
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCCCC
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNHDL 120 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~ 120 (328)
..++.+ ...++-+||+|+|..... -...+...+.+.+.|+++++++-++
T Consensus 27 ~v~kai--~~gkakLViiA~D~~~~~-~~~~l~~lc~~~~VP~~~v~sk~eL 75 (121)
T 2lbw_A 27 EVVKAL--RKGEKGLVVIAGDIWPAD-VISHIPVLCEDHSVPYIFIPSKQDL 75 (121)
T ss_dssp HHHHHH--HHSCCCEEEECTTCSCTT-HHHHHHHHHHHTCCCEEECCCHHHH
T ss_pred HHHHHH--HcCCceEEEEeCCCCHHH-HHHHHHHHHHhcCCcEEEECCHHHH
Confidence 345555 456889999999997531 0123334555668999998765443
No 82
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=25.01 E-value=1.3e+02 Score=25.37 Aligned_cols=35 Identities=26% Similarity=0.294 Sum_probs=25.3
Q ss_pred cCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECC
Q 042652 77 TRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPG 116 (328)
Q Consensus 77 ~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~G 116 (328)
...+||+||..+.... ....+.|++.+.|++++..
T Consensus 56 ~~l~PDlIi~~~~~~~-----~~~~~~L~~~gipvv~~~~ 90 (255)
T 3md9_A 56 LAMKPTMLLVSELAQP-----SLVLTQIASSGVNVVTVPG 90 (255)
T ss_dssp HTTCCSEEEEETTCSC-----HHHHHHHHHTTCEEEEECC
T ss_pred HccCCCEEEEcCCcCc-----hhHHHHHHHcCCcEEEeCC
Confidence 4679999988765321 3456778888889999864
No 83
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=23.16 E-value=1.7e+02 Score=20.98 Aligned_cols=46 Identities=11% Similarity=0.155 Sum_probs=26.3
Q ss_pred HHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhc-CCcEEEECCCCC
Q 042652 70 WVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDR-FQRVLFVPGNHD 119 (328)
Q Consensus 70 ~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~-~~~v~~V~GNHD 119 (328)
.++.+ ...++|++++-=.+.+ .+-..+++.+++. ..|++++-|..+
T Consensus 38 al~~~--~~~~~dlii~D~~~p~--~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 38 AVEMV--EELQPDLILLDIMLPN--KDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp HHHHH--HTTCCSEEEEETTSTT--THHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred HHHHH--hhCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 44444 4567898888433332 2223455555543 568888877655
No 84
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=22.42 E-value=2.2e+02 Score=20.92 Aligned_cols=46 Identities=11% Similarity=0.138 Sum_probs=27.8
Q ss_pred HHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHh--c--CCcEEEECCCCC
Q 042652 70 WVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKD--R--FQRVLFVPGNHD 119 (328)
Q Consensus 70 ~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~--~--~~~v~~V~GNHD 119 (328)
.++.+ ....+|+||+-=++.+ .+-..+++.+++ . ..|++++-+..+
T Consensus 43 a~~~l--~~~~~dlii~D~~l~~--~~g~~~~~~lr~~~~~~~~pii~~s~~~~ 92 (144)
T 3kht_A 43 ALYQV--QQAKYDLIILDIGLPI--ANGFEVMSAVRKPGANQHTPIVILTDNVS 92 (144)
T ss_dssp HHHHH--TTCCCSEEEECTTCGG--GCHHHHHHHHHSSSTTTTCCEEEEETTCC
T ss_pred HHHHh--hcCCCCEEEEeCCCCC--CCHHHHHHHHHhcccccCCCEEEEeCCCC
Confidence 34444 4567898888544433 223456666665 2 467888877655
No 85
>2ov6_A V-type ATP synthase subunit F; F subunit, A1AO ATP synthase, hydrolase; NMR {Methanosarcina mazei}
Probab=21.69 E-value=1e+02 Score=22.85 Aligned_cols=47 Identities=15% Similarity=0.202 Sum_probs=29.3
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCc-EEEECCCC
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQR-VLFVPGNH 118 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~-v~~V~GNH 118 (328)
+.++.+. ...+..+|+++=++.+...+. ..+...+...| ++-+|++|
T Consensus 34 ~~~~~l~-~~~digIIlite~~a~~i~~~--i~~~~~~~~~P~Iv~IP~~~ 81 (101)
T 2ov6_A 34 SAVRSVL-EDKSVGILVMHNDDIGNLPEV--LRKNLNESVQPTVVALGGSG 81 (101)
T ss_dssp HHHHHHH-HHTSSSEEEEEHHHHTTCTTT--THHHHHHHCCSCEEEECTTS
T ss_pred HHHHHHh-hCCCeEEEEEcHHHHHHhHHH--HHHHHhCCCCcEEEEECCCC
Confidence 3444443 356789999999998875321 11333333344 88899999
No 86
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=21.09 E-value=1.5e+02 Score=22.42 Aligned_cols=46 Identities=17% Similarity=0.185 Sum_probs=29.5
Q ss_pred HHHHHhhcCCCCCEEEEcccccCCc-hhHHHHHHHHHhcCCcEEEECCCCC
Q 042652 70 WVKCLSTTRHKKDVLLVAGDVAEKY-DDFVLTMSLLKDRFQRVLFVPGNHD 119 (328)
Q Consensus 70 ~l~~l~~~~~~~D~li~~GDi~~~~-~~~~~~~~~l~~~~~~v~~V~GNHD 119 (328)
..+.+ ...+.-+||+|.|..... . ..+.......+.|++++..+-+
T Consensus 35 v~kal--~~gka~lViiA~D~~~~~~~--~~l~~lc~~~~Vp~~~~~sk~e 81 (119)
T 1rlg_A 35 TTKAV--ERGLAKLVYIAEDVDPPEIV--AHLPLLCEEKNVPYIYVKSKND 81 (119)
T ss_dssp HHHHH--TTTCCSEEEEESCCSCSTTT--THHHHHHHHHTCCEEEESCHHH
T ss_pred HHHHH--HcCCCcEEEEeCCCChHHHH--HHHHHHHHHcCCCEEEeCCHHH
Confidence 34455 567889999999997642 1 2233344455789888865544
No 87
>4a17_F RPL7A, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_F 4a1c_F 4a1e_F
Probab=20.23 E-value=1.9e+02 Score=25.45 Aligned_cols=48 Identities=19% Similarity=0.322 Sum_probs=32.8
Q ss_pred HHHHHHhhcCCCCCEEEEcccccCCchhHHHHH-HHHHhcCCcEEEECCCCCC
Q 042652 69 TWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTM-SLLKDRFQRVLFVPGNHDL 120 (328)
Q Consensus 69 ~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~-~~l~~~~~~v~~V~GNHD~ 120 (328)
.....+ ...+.-+||+|+|.... ++..++ .++.+.+.|+++|+|.-++
T Consensus 131 eVtKaI--ekgKAqLVVIA~DvdPi--elv~~LPaLCee~~VPY~~V~sK~~L 179 (255)
T 4a17_F 131 HITTLI--ENKQAKLVVIAHDVDPI--ELVIFLPQLCRKNDVPFAFVKGKAAL 179 (255)
T ss_dssp HHHHHH--HTSCCSEEEEESCCSST--HHHHHHHHHHHHTTCCEEEESCHHHH
T ss_pred HHHHHH--HcCCceEEEEeCCCChH--HHHHHHHHHHHHcCCCEEEECCHHHH
Confidence 344555 46788999999999543 344455 4445668999999876554
No 88
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=20.13 E-value=1.9e+02 Score=24.53 Aligned_cols=60 Identities=10% Similarity=0.030 Sum_probs=35.7
Q ss_pred EEEEeCCCCCCcccHHHHHHHhhcCCCCCEEEEcccccCCchhHHHHHHHHHhcCCcEEEECCCC
Q 042652 54 VFVLSDLHTDYSENMTWVKCLSTTRHKKDVLLVAGDVAEKYDDFVLTMSLLKDRFQRVLFVPGNH 118 (328)
Q Consensus 54 i~~iSDlH~~~~~~~~~l~~l~~~~~~~D~li~~GDi~~~~~~~~~~~~~l~~~~~~v~~V~GNH 118 (328)
+....+-+.+.....+.++.+ ...++|.||+.+--.+ .....++.+.+.+.|++++-...
T Consensus 45 ~~~~~~~~~~~~~~~~~i~~l--~~~~vdgiii~~~~~~---~~~~~~~~~~~~~iPvV~~~~~~ 104 (304)
T 3gbv_A 45 ANITHYDPYDYNSFVATSQAV--IEEQPDGVMFAPTVPQ---YTKGFTDALNELGIPYIYIDSQI 104 (304)
T ss_dssp EEEEEECSSCHHHHHHHHHHH--HTTCCSEEEECCSSGG---GTHHHHHHHHHHTCCEEEESSCC
T ss_pred EEEEcCCCCCHHHHHHHHHHH--HhcCCCEEEECCCChH---HHHHHHHHHHHCCCeEEEEeCCC
Confidence 333333343333334456665 5678999999874322 22455677777789998885433
Done!