Query 042654
Match_columns 270
No_of_seqs 129 out of 416
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 14:23:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042654.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042654hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 99.9 2.7E-23 9.4E-28 205.7 18.8 212 32-268 197-506 (656)
2 3ii7_A Kelch-like protein 7; p 99.4 3.3E-12 1.1E-16 113.0 16.1 195 33-267 12-233 (306)
3 1zgk_A Kelch-like ECH-associat 99.4 8.2E-12 2.8E-16 111.3 18.7 194 30-267 22-248 (308)
4 1zgk_A Kelch-like ECH-associat 99.4 1.4E-11 4.6E-16 109.9 18.5 192 32-267 70-295 (308)
5 3ii7_A Kelch-like protein 7; p 99.4 5E-12 1.7E-16 111.9 14.8 193 31-267 54-280 (306)
6 2xn4_A Kelch-like protein 2; s 99.4 2.1E-11 7.3E-16 107.6 16.7 193 33-267 16-237 (302)
7 2xn4_A Kelch-like protein 2; s 99.4 2.5E-11 8.4E-16 107.2 17.1 191 32-266 61-283 (302)
8 2vpj_A Kelch-like protein 12; 99.3 3.6E-11 1.2E-15 105.9 17.2 192 32-267 14-239 (301)
9 1k3i_A Galactose oxidase precu 99.3 2.3E-11 7.8E-16 120.3 16.8 195 32-255 297-548 (656)
10 2vpj_A Kelch-like protein 12; 99.3 5.4E-11 1.9E-15 104.7 16.4 192 31-266 61-285 (301)
11 4asc_A Kelch repeat and BTB do 99.3 3.7E-11 1.3E-15 107.1 15.1 179 46-267 14-229 (315)
12 2woz_A Kelch repeat and BTB do 99.3 2.9E-11 1E-15 108.0 11.7 192 33-267 16-239 (318)
13 4asc_A Kelch repeat and BTB do 99.2 2.1E-10 7.2E-15 102.2 15.9 199 31-267 44-285 (315)
14 2zwa_A Leucine carboxyl methyl 99.2 3.4E-10 1.2E-14 113.9 17.6 204 32-265 397-641 (695)
15 2woz_A Kelch repeat and BTB do 99.2 6.6E-10 2.3E-14 99.1 17.1 201 31-267 55-295 (318)
16 2uvk_A YJHT; unknown function, 99.2 5.5E-10 1.9E-14 100.8 14.5 203 32-266 19-301 (357)
17 2uvk_A YJHT; unknown function, 98.8 4.6E-08 1.6E-12 88.2 12.0 160 77-267 168-350 (357)
18 2zwa_A Leucine carboxyl methyl 98.7 1.2E-07 4.3E-12 95.2 12.8 162 64-266 398-590 (695)
19 3no2_A Uncharacterized protein 86.6 8.5 0.00029 33.2 11.8 81 35-124 7-96 (276)
20 1l0q_A Surface layer protein; 67.4 59 0.002 27.8 11.3 81 46-134 13-103 (391)
21 4e54_B DNA damage-binding prot 59.6 95 0.0033 27.6 12.7 91 35-133 134-237 (435)
22 3lrv_A PRE-mRNA-splicing facto 58.0 88 0.003 26.6 11.9 80 48-134 107-199 (343)
23 1gxr_A ESG1, transducin-like e 57.6 78 0.0027 25.9 10.4 88 35-133 155-252 (337)
24 1lv4_A Catestatin, chromograni 56.9 4.1 0.00014 24.1 1.1 15 8-22 5-19 (26)
25 1l0q_A Surface layer protein; 51.1 99 0.0034 26.4 9.7 81 46-134 55-145 (391)
26 2ydt_A EXO-1,5-alpha-L-arabino 43.1 2E+02 0.0068 26.4 11.7 33 202-234 310-345 (367)
27 3no2_A Uncharacterized protein 39.0 1.4E+02 0.0049 25.3 8.8 46 76-130 145-190 (276)
28 3a72_A EXO-arabinanase; arabin 35.1 2.6E+02 0.0088 25.4 10.4 31 202-232 301-334 (355)
29 3vgz_A Uncharacterized protein 29.6 2.4E+02 0.0081 23.3 8.8 86 45-134 164-260 (353)
30 3lrv_A PRE-mRNA-splicing facto 26.5 1.5E+02 0.0051 25.1 6.7 89 35-134 141-242 (343)
31 2aq5_A Coronin-1A; WD40 repeat 21.9 2.8E+02 0.0096 23.8 7.8 94 33-133 188-296 (402)
32 3sfz_A APAF-1, apoptotic pepti 21.5 6.4E+02 0.022 25.5 12.2 168 33-231 1015-1197(1249)
33 3ow8_A WD repeat-containing pr 21.3 3.7E+02 0.013 22.6 8.7 91 33-133 218-318 (321)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.90 E-value=2.7e-23 Score=205.73 Aligned_cols=212 Identities=16% Similarity=0.252 Sum_probs=160.5
Q ss_pred CCCceEeecCCC---------eeeeEEEeCCCCceEecCC---CCCcccCCCeecC-----------CCcEEEecCCCCC
Q 042654 32 WNKPSVFEDWSC---------YAHFVEYNILGNKIRPLRF---DTDSWCSSVVDMA-----------SRRIRYFRPCENG 88 (270)
Q Consensus 32 ~gkv~~~~~~~~---------~a~a~~yDp~T~t~~pl~v---~td~FCsgg~~L~-----------~~~~r~ydP~~~~ 88 (270)
-||+.++++.+. .....+||+.|++|+.+.. ..+.||++.+++. ...+++|||+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~--- 273 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSS--- 273 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGG---
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCc---
Confidence 577888876532 3468899999999998764 4789998877665 3469999998
Q ss_pred CCceeeccccccccccccceeecCCCCCcEEEEcCCC-----CceeEeccCCCC-------C--CC---C----------
Q 042654 89 HYNWKQLKWLLSDARWYASNQILPAANDRVILVGGRG-----SFIYEFVPKLSS-------S--SS---D---------- 141 (270)
Q Consensus 89 ~~~W~~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~-----~~t~E~~ppL~~-------T--~d---~---------- 141 (270)
+++|++.+ .|..+|||+++++|+| |+|+|+||.. ..+.|+|++... . .+ .
T Consensus 274 t~~W~~~~-~~~~~R~~~s~~~~~d--g~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~ 350 (656)
T 1k3i_A 274 SDSWIPGP-DMQVARGYQSSATMSD--GRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDN 350 (656)
T ss_dssp GTEEEECC-CCSSCCSSCEEEECTT--SCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTC
T ss_pred CCceeECC-CCCccccccceEEecC--CeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCC
Confidence 67999765 6999999999999999 9999999952 356788876110 0 00 0
Q ss_pred -------------------------------------CC-------CCCCCceecccCCcCCCCceeEEEEEcCCCCCch
Q 042654 142 -------------------------------------KN-------CPSSGSSVLLCLDHSNNFRKVKVMVCGGAAAGAY 177 (270)
Q Consensus 142 -------------------------------------R~-------yp~sg~svmLPl~~~~~y~~~~VLv~GG~~~~~~ 177 (270)
|. .+..++++|+|. .+++|+||||.....
T Consensus 351 ~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~------~~~~i~v~GG~~~~~- 423 (656)
T 1k3i_A 351 HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA------VKGKILTFGGSPDYQ- 423 (656)
T ss_dssp SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET------TTTEEEEECCBSSSS-
T ss_pred ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccC------CCCeEEEEeCCCCCC-
Confidence 00 234567777764 357999999975311
Q ss_pred hhhcccccccCCCceeEEEecCC-CCceee---cCCCCCcccCceeecCCccEEEEcCccccCCCccCCCCCCccceeec
Q 042654 178 RVAAQGRFLKGLSSCGTMVLTRN-KHVWKM---EHMPEPRLLNNMLILPTGHILIINGAKRGSAGWNNAASLSFRPYLYK 253 (270)
Q Consensus 178 ~~~~~~~~~pAs~~~~~I~l~~~-~~~W~~---e~Mp~~R~m~~~vlLPDG~Vli~gGa~~G~aG~~~a~~Pv~~pelYd 253 (270)
...+++.|.+|++.++ ...|+. +.||.+|.++.+++||||+|+|+||...+. +| .+.++..+.|+||
T Consensus 424 -------~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~-~~~~~~~~v~~yd 494 (656)
T 1k3i_A 424 -------DSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PF-EDSTPVFTPEIYV 494 (656)
T ss_dssp -------SSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TT-CCCSBCCCCEEEE
T ss_pred -------CCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc-Cc-CCCCcccceEEEc
Confidence 2356777888887665 467874 399999999999999999999999987653 34 3678899999999
Q ss_pred CCCCCCCceeecccC
Q 042654 254 PRKTLGKVFSSSLHK 268 (270)
Q Consensus 254 P~~~~G~rft~~~~~ 268 (270)
|++. +|+++.+.
T Consensus 495 p~t~---~W~~~~~~ 506 (656)
T 1k3i_A 495 PEQD---TFYKQNPN 506 (656)
T ss_dssp GGGT---EEEECCCC
T ss_pred CCCC---ceeecCCC
Confidence 9998 99998753
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.43 E-value=3.3e-12 Score=113.05 Aligned_cols=195 Identities=13% Similarity=0.123 Sum_probs=132.0
Q ss_pred CCceEeecCCCeeeeEEEeCCCCceEecCCC-------------CCcccCCCee-cCCCcEEEecCCCCCCCceeecccc
Q 042654 33 NKPSVFEDWSCYAHFVEYNILGNKIRPLRFD-------------TDSWCSSVVD-MASRRIRYFRPCENGHYNWKQLKWL 98 (270)
Q Consensus 33 gkv~~~~~~~~~a~a~~yDp~T~t~~pl~v~-------------td~FCsgg~~-L~~~~~r~ydP~~~~~~~W~~~~~~ 98 (270)
+.+.++++.+.......||+.+++|+.+... ..+|+-||.. .....+..|||. +.+|.+.+ .
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~---~~~W~~~~-~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVV---KDSWYSKL-G 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETT---TTEEEEEE-C
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCC---CCeEEECC-C
Confidence 4567788776666777899999999988531 1233333322 114678889998 67898764 5
Q ss_pred ccccccccceeecCCCCCcEEEEcCCC-----CceeEeccCCCCC-------CCCCCCCCCCceecccCCcCCCCceeEE
Q 042654 99 LSDARWYASNQILPAANDRVILVGGRG-----SFIYEFVPKLSSS-------SSDKNCPSSGSSVLLCLDHSNNFRKVKV 166 (270)
Q Consensus 99 M~~~RWYpT~~tL~D~~GrVliiGG~~-----~~t~E~~ppL~~T-------~d~R~yp~sg~svmLPl~~~~~y~~~~V 166 (270)
|..+|++++++.+ + |+|+|+||.+ ....|.|++...+ ..+|... +++. .+++|
T Consensus 88 ~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~---~~~~---------~~~~i 152 (306)
T 3ii7_A 88 PPTPRDSLAACAA-E--GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH---GMVE---------ANGLI 152 (306)
T ss_dssp CSSCCBSCEEEEE-T--TEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC---EEEE---------ETTEE
T ss_pred CCccccceeEEEE-C--CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee---EEEE---------ECCEE
Confidence 8899999999988 6 7999999974 2457778762211 1133221 2222 24699
Q ss_pred EEEcCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEcCccccCCCccCCCCC
Q 042654 167 MVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIINGAKRGSAGWNNAASL 245 (270)
Q Consensus 167 Lv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~gGa~~G~aG~~~a~~P 245 (270)
+|+||...... .....+.+.+.++ ...+|+.. +|+.+|..+.++++ +++++|+||.... ..
T Consensus 153 yv~GG~~~~~~-------~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~--------~~ 214 (306)
T 3ii7_A 153 YVCGGSLGNNV-------SGRVLNSCEVYDP--ATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGL--------GG 214 (306)
T ss_dssp EEECCEESCTT-------TCEECCCEEEEET--TTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETT--------EE
T ss_pred EEECCCCCCCC-------cccccceEEEeCC--CCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCC--------CC
Confidence 99999643211 0011444555554 35689865 99999999999988 8999999997521 12
Q ss_pred CccceeecCCCCCCCceeeccc
Q 042654 246 SFRPYLYKPRKTLGKVFSSSLH 267 (270)
Q Consensus 246 v~~pelYdP~~~~G~rft~~~~ 267 (270)
.-.-++|||.+. +|+++.+
T Consensus 215 ~~~~~~yd~~~~---~W~~~~~ 233 (306)
T 3ii7_A 215 LDNVEYYDIKLN---EWKMVSP 233 (306)
T ss_dssp BCCEEEEETTTT---EEEECCC
T ss_pred CceEEEeeCCCC---cEEECCC
Confidence 335689999999 9998854
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.43 E-value=8.2e-12 Score=111.29 Aligned_cols=194 Identities=13% Similarity=0.083 Sum_probs=132.8
Q ss_pred CcCCCceEeecC--CCeeeeEEEeCCCCceEecCC-------------CCCcccCCCee---c---CCCcEEEecCCCCC
Q 042654 30 IQWNKPSVFEDW--SCYAHFVEYNILGNKIRPLRF-------------DTDSWCSSVVD---M---ASRRIRYFRPCENG 88 (270)
Q Consensus 30 ~~~gkv~~~~~~--~~~a~a~~yDp~T~t~~pl~v-------------~td~FCsgg~~---L---~~~~~r~ydP~~~~ 88 (270)
..-+++.++++. ........||+.+++|+.+.. ...+|+-||.. . ....+..||+.
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~--- 98 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPM--- 98 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETT---
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCC---
Confidence 334677888875 235567899999999998752 12344444432 1 14578899998
Q ss_pred CCceeeccccccccccccceeecCCCCCcEEEEcCCC----CceeEeccCCCC-------CCCCCCCCCCCceecccCCc
Q 042654 89 HYNWKQLKWLLSDARWYASNQILPAANDRVILVGGRG----SFIYEFVPKLSS-------SSSDKNCPSSGSSVLLCLDH 157 (270)
Q Consensus 89 ~~~W~~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~----~~t~E~~ppL~~-------T~d~R~yp~sg~svmLPl~~ 157 (270)
+.+|++.+ .|..+|.+++++.+ | |+|+|+||.. ....|.|++... ...+|... +++.+
T Consensus 99 ~~~W~~~~-~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~~~---- 167 (308)
T 1zgk_A 99 TNQWSPCA-PMSVPRNRIGVGVI-D--GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGV---GVAVL---- 167 (308)
T ss_dssp TTEEEECC-CCSSCCBTCEEEEE-T--TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSC---EEEEE----
T ss_pred CCeEeECC-CCCcCccccEEEEE-C--CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccce---EEEEE----
Confidence 67899765 58999999999988 7 7999999964 245677776221 11133321 22222
Q ss_pred CCCCceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEcCccccC
Q 042654 158 SNNFRKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIINGAKRGS 236 (270)
Q Consensus 158 ~~~y~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~gGa~~G~ 236 (270)
+.+|+|+||..... .++...+.++ ...+|+.. +||.+|..+.++++ +++++|+||...
T Consensus 168 -----~~~iyv~GG~~~~~-----------~~~~~~~yd~--~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-- 226 (308)
T 1zgk_A 168 -----NRLLYAVGGFDGTN-----------RLNSAECYYP--ERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDG-- 226 (308)
T ss_dssp -----TTEEEEECCBCSSC-----------BCCCEEEEET--TTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS--
T ss_pred -----CCEEEEEeCCCCCC-----------cCceEEEEeC--CCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCC--
Confidence 36999999975321 1344444553 45789965 99999999999888 999999999752
Q ss_pred CCccCCCCCCccceeecCCCCCCCceeeccc
Q 042654 237 AGWNNAASLSFRPYLYKPRKTLGKVFSSSLH 267 (270)
Q Consensus 237 aG~~~a~~Pv~~pelYdP~~~~G~rft~~~~ 267 (270)
......-++|||++. +|+++.+
T Consensus 227 ------~~~~~~v~~yd~~~~---~W~~~~~ 248 (308)
T 1zgk_A 227 ------QDQLNSVERYDVETE---TWTFVAP 248 (308)
T ss_dssp ------SSBCCCEEEEETTTT---EEEECCC
T ss_pred ------CCccceEEEEeCCCC---cEEECCC
Confidence 112345789999998 9998754
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.41 E-value=1.4e-11 Score=109.86 Aligned_cols=192 Identities=14% Similarity=0.138 Sum_probs=129.3
Q ss_pred CCCceEeecC----C---CeeeeEEEeCCCCceEecCCC-------------CCcccCCCeecC--CCcEEEecCCCCCC
Q 042654 32 WNKPSVFEDW----S---CYAHFVEYNILGNKIRPLRFD-------------TDSWCSSVVDMA--SRRIRYFRPCENGH 89 (270)
Q Consensus 32 ~gkv~~~~~~----~---~~a~a~~yDp~T~t~~pl~v~-------------td~FCsgg~~L~--~~~~r~ydP~~~~~ 89 (270)
-+++-++++. + .......||+.+++|+.+... ..++.-||..-. ...+..||+. +
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~---~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPE---R 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETT---T
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCC---C
Confidence 4677777776 2 234567899999999988531 122222332211 4678899998 6
Q ss_pred CceeeccccccccccccceeecCCCCCcEEEEcCCC----CceeEeccCCCC-------CCCCCCCCCCCceecccCCcC
Q 042654 90 YNWKQLKWLLSDARWYASNQILPAANDRVILVGGRG----SFIYEFVPKLSS-------SSSDKNCPSSGSSVLLCLDHS 158 (270)
Q Consensus 90 ~~W~~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~----~~t~E~~ppL~~-------T~d~R~yp~sg~svmLPl~~~ 158 (270)
.+|++.+ .|..+|..++++.+ + |+|+|+||.+ ....|.|++... ...+|... +++.+
T Consensus 147 ~~W~~~~-~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~~~----- 214 (308)
T 1zgk_A 147 DEWHLVA-PMLTRRIGVGVAVL-N--RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGA---GVCVL----- 214 (308)
T ss_dssp TEEEECC-CCSSCCBSCEEEEE-T--TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSC---EEEEE-----
T ss_pred CeEeECC-CCCccccceEEEEE-C--CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccc---eEEEE-----
Confidence 7999765 58899999999888 6 7999999974 345777876211 11133321 22222
Q ss_pred CCCceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEcCccccCC
Q 042654 159 NNFRKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIINGAKRGSA 237 (270)
Q Consensus 159 ~~y~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~gGa~~G~a 237 (270)
..+|+|+||..... ......+.++ ...+|+.. +||.+|..+.++++ +++++|+||...
T Consensus 215 ----~~~iyv~GG~~~~~-----------~~~~v~~yd~--~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~--- 273 (308)
T 1zgk_A 215 ----HNCIYAAGGYDGQD-----------QLNSVERYDV--ETETWTFVAPMKHRRSALGITVH-QGRIYVLGGYDG--- 273 (308)
T ss_dssp ----TTEEEEECCBCSSS-----------BCCCEEEEET--TTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS---
T ss_pred ----CCEEEEEeCCCCCC-----------ccceEEEEeC--CCCcEEECCCCCCCccceEEEEE-CCEEEEEcCcCC---
Confidence 36899999975321 1344444443 35789965 99999999998887 899999999642
Q ss_pred CccCCCCCCccceeecCCCCCCCceeeccc
Q 042654 238 GWNNAASLSFRPYLYKPRKTLGKVFSSSLH 267 (270)
Q Consensus 238 G~~~a~~Pv~~pelYdP~~~~G~rft~~~~ 267 (270)
....-.-++|||++. +|+++.+
T Consensus 274 -----~~~~~~v~~yd~~~~---~W~~~~~ 295 (308)
T 1zgk_A 274 -----HTFLDSVECYDPDTD---TWSEVTR 295 (308)
T ss_dssp -----SCBCCEEEEEETTTT---EEEEEEE
T ss_pred -----CcccceEEEEcCCCC---EEeecCC
Confidence 112335689999999 9998743
No 5
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.40 E-value=5e-12 Score=111.87 Aligned_cols=193 Identities=12% Similarity=0.092 Sum_probs=129.8
Q ss_pred cCCCceEeecCC--CeeeeEEEeCCCCceEecCC-------------CCCcccCCCeecC---CCcEEEecCCCCCCCce
Q 042654 31 QWNKPSVFEDWS--CYAHFVEYNILGNKIRPLRF-------------DTDSWCSSVVDMA---SRRIRYFRPCENGHYNW 92 (270)
Q Consensus 31 ~~gkv~~~~~~~--~~a~a~~yDp~T~t~~pl~v-------------~td~FCsgg~~L~---~~~~r~ydP~~~~~~~W 92 (270)
.-|++-++++.+ .......||+.+++|+.+.. ...+++.||.-.. ...+..||+. +.+|
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~---~~~W 130 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTR---TESW 130 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETT---TTEE
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCC---CCce
Confidence 346777888765 45567789999999987742 1223444443211 4678899998 5789
Q ss_pred eeccccccccccccceeecCCCCCcEEEEcCCC--------CceeEeccCCCCC-------CCCCCCCCCCceecccCCc
Q 042654 93 KQLKWLLSDARWYASNQILPAANDRVILVGGRG--------SFIYEFVPKLSSS-------SSDKNCPSSGSSVLLCLDH 157 (270)
Q Consensus 93 ~~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~--------~~t~E~~ppL~~T-------~d~R~yp~sg~svmLPl~~ 157 (270)
++.+ .|..+|..++++.+ + |+++|+||.. ....|.|++-..+ ..+|... +++.+
T Consensus 131 ~~~~-~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~~~---- 199 (306)
T 3ii7_A 131 HTKP-SMLTQRCSHGMVEA-N--GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNH---GLVFV---- 199 (306)
T ss_dssp EEEC-CCSSCCBSCEEEEE-T--TEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSC---EEEEE----
T ss_pred EeCC-CCcCCcceeEEEEE-C--CEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcc---eEEEE----
Confidence 8764 58899999998887 6 7999999962 3457788762211 0023221 22222
Q ss_pred CCCCceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEcCccccC
Q 042654 158 SNNFRKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIINGAKRGS 236 (270)
Q Consensus 158 ~~~y~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~gGa~~G~ 236 (270)
.++|+|+||..... ..+...+.+ ....+|+.. +||.+|..+.++++ +++++|+||....
T Consensus 200 -----~~~i~v~GG~~~~~-----------~~~~~~~yd--~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~- 259 (306)
T 3ii7_A 200 -----KDKIFAVGGQNGLG-----------GLDNVEYYD--IKLNEWKMVSPMPWKGVTVKCAAV-GSIVYVLAGFQGV- 259 (306)
T ss_dssp -----TTEEEEECCEETTE-----------EBCCEEEEE--TTTTEEEECCCCSCCBSCCEEEEE-TTEEEEEECBCSS-
T ss_pred -----CCEEEEEeCCCCCC-----------CCceEEEee--CCCCcEEECCCCCCCccceeEEEE-CCEEEEEeCcCCC-
Confidence 46899999964321 122333333 345789965 99999999999998 9999999997421
Q ss_pred CCccCCCCCCccceeecCCCCCCCceeeccc
Q 042654 237 AGWNNAASLSFRPYLYKPRKTLGKVFSSSLH 267 (270)
Q Consensus 237 aG~~~a~~Pv~~pelYdP~~~~G~rft~~~~ 267 (270)
...-.-+.|||++. +|+++.+
T Consensus 260 -------~~~~~~~~yd~~~~---~W~~~~~ 280 (306)
T 3ii7_A 260 -------GRLGHILEYNTETD---KWVANSK 280 (306)
T ss_dssp -------SBCCEEEEEETTTT---EEEEEEE
T ss_pred -------eeeeeEEEEcCCCC---eEEeCCC
Confidence 12225689999999 9998753
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.36 E-value=2.1e-11 Score=107.61 Aligned_cols=193 Identities=12% Similarity=0.138 Sum_probs=127.6
Q ss_pred CCceEeecCCC--eeeeEEEeCCCCceEecCCC-------------CCcccCCCeecC--CCcEEEecCCCCCCCceeec
Q 042654 33 NKPSVFEDWSC--YAHFVEYNILGNKIRPLRFD-------------TDSWCSSVVDMA--SRRIRYFRPCENGHYNWKQL 95 (270)
Q Consensus 33 gkv~~~~~~~~--~a~a~~yDp~T~t~~pl~v~-------------td~FCsgg~~L~--~~~~r~ydP~~~~~~~W~~~ 95 (270)
+++.++++.+. ......||+.+++|+.+... ..+++-||..-. ...+..|||. +.+|++.
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~---~~~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPV---KDQWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETT---TTEEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCC---CCceeeC
Confidence 45677776542 34567899999999887421 123333332111 4568899998 6789976
Q ss_pred cccccccccccceeecCCCCCcEEEEcCCCC----ceeEeccCCCCC-------CCCCCCCCCCceecccCCcCCCCcee
Q 042654 96 KWLLSDARWYASNQILPAANDRVILVGGRGS----FIYEFVPKLSSS-------SSDKNCPSSGSSVLLCLDHSNNFRKV 164 (270)
Q Consensus 96 ~~~M~~~RWYpT~~tL~D~~GrVliiGG~~~----~t~E~~ppL~~T-------~d~R~yp~sg~svmLPl~~~~~y~~~ 164 (270)
+ .|..+|.+++++.+ + |+|+|+||.+. ...|.|++...+ ..+|... +++.+ ++
T Consensus 93 ~-~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~---~~~~~---------~~ 156 (302)
T 2xn4_A 93 A-NMRDRRSTLGAAVL-N--GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV---GVGVV---------GG 156 (302)
T ss_dssp C-CCSSCCBSCEEEEE-T--TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC---EEEEE---------TT
T ss_pred C-CCCccccceEEEEE-C--CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc---eEEEE---------CC
Confidence 5 59999999999987 6 79999999743 356777762211 1133321 22222 46
Q ss_pred EEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEcCccccCCCccCCC
Q 042654 165 KVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIINGAKRGSAGWNNAA 243 (270)
Q Consensus 165 ~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~gGa~~G~aG~~~a~ 243 (270)
+|+|+||...... ..++...+.++ ...+|+.. +||.+|..+.++++ +++++|+||....
T Consensus 157 ~iyv~GG~~~~~~---------~~~~~~~~yd~--~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~-------- 216 (302)
T 2xn4_A 157 LLYAVGGYDVASR---------QCLSTVECYNA--TTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGP-------- 216 (302)
T ss_dssp EEEEECCEETTTT---------EECCCEEEEET--TTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSS--------
T ss_pred EEEEEeCCCCCCC---------ccccEEEEEeC--CCCcEEECCCCccccccccEEEE-CCEEEEECCCCCC--------
Confidence 9999999643210 12334444443 45789965 99999999988777 8999999997421
Q ss_pred CCCccceeecCCCCCCCceeeccc
Q 042654 244 SLSFRPYLYKPRKTLGKVFSSSLH 267 (270)
Q Consensus 244 ~Pv~~pelYdP~~~~G~rft~~~~ 267 (270)
...-.-++|||++. +|+++.+
T Consensus 217 ~~~~~~~~yd~~~~---~W~~~~~ 237 (302)
T 2xn4_A 217 LVRKSVEVYDPTTN---AWRQVAD 237 (302)
T ss_dssp SBCCCEEEEETTTT---EEEEECC
T ss_pred cccceEEEEeCCCC---CEeeCCC
Confidence 12235789999998 9998764
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.36 E-value=2.5e-11 Score=107.22 Aligned_cols=191 Identities=10% Similarity=0.080 Sum_probs=125.4
Q ss_pred CCCceEeecCC---CeeeeEEEeCCCCceEecCCC-CCcccC-----CCeecC---------CCcEEEecCCCCCCCcee
Q 042654 32 WNKPSVFEDWS---CYAHFVEYNILGNKIRPLRFD-TDSWCS-----SVVDMA---------SRRIRYFRPCENGHYNWK 93 (270)
Q Consensus 32 ~gkv~~~~~~~---~~a~a~~yDp~T~t~~pl~v~-td~FCs-----gg~~L~---------~~~~r~ydP~~~~~~~W~ 93 (270)
-|++-++++.+ .......||+.+++|+.+... ...... ++.+.. ...+..||+. +.+|+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~---~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIK---SNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETT---TTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCC---CCeEe
Confidence 46677777754 244567899999999987631 111111 111111 2468889997 67899
Q ss_pred eccccccccccccceeecCCCCCcEEEEcCCC------CceeEeccCCCC-------CCCCCCCCCCCceecccCCcCCC
Q 042654 94 QLKWLLSDARWYASNQILPAANDRVILVGGRG------SFIYEFVPKLSS-------SSSDKNCPSSGSSVLLCLDHSNN 160 (270)
Q Consensus 94 ~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~------~~t~E~~ppL~~-------T~d~R~yp~sg~svmLPl~~~~~ 160 (270)
+.+ .|..+|..++++.+ + |+|+|+||.+ ....|.|++-.. ...+|... +++.
T Consensus 138 ~~~-~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~~-------- 202 (302)
T 2xn4_A 138 HVA-PMNTRRSSVGVGVV-G--GLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA---GVGV-------- 202 (302)
T ss_dssp EEC-CCSSCCBSCEEEEE-T--TEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC---EEEE--------
T ss_pred ecC-CCCCcccCceEEEE-C--CEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccc---cEEE--------
Confidence 765 58899999988876 6 7999999973 245777876221 11133321 2222
Q ss_pred CceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEcCccccCCCc
Q 042654 161 FRKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIINGAKRGSAGW 239 (270)
Q Consensus 161 y~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~gGa~~G~aG~ 239 (270)
.+.+|+|+||.+... .++...+.++ ...+|+.- +|+.+|..+.++++ +|+++|+||...
T Consensus 203 -~~~~iyv~GG~~~~~-----------~~~~~~~yd~--~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~----- 262 (302)
T 2xn4_A 203 -LNNLLYAVGGHDGPL-----------VRKSVEVYDP--TTNAWRQVADMNMCRRNAGVCAV-NGLLYVVGGDDG----- 262 (302)
T ss_dssp -ETTEEEEECCBSSSS-----------BCCCEEEEET--TTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCS-----
T ss_pred -ECCEEEEECCCCCCc-----------ccceEEEEeC--CCCCEeeCCCCCCccccCeEEEE-CCEEEEECCcCC-----
Confidence 246999999965321 1233444443 45789864 99999998887776 899999999742
Q ss_pred cCCCCCCccceeecCCCCCCCceeecc
Q 042654 240 NNAASLSFRPYLYKPRKTLGKVFSSSL 266 (270)
Q Consensus 240 ~~a~~Pv~~pelYdP~~~~G~rft~~~ 266 (270)
....-.-++|||+++ +|+++.
T Consensus 263 ---~~~~~~v~~yd~~~~---~W~~~~ 283 (302)
T 2xn4_A 263 ---SCNLASVEYYNPTTD---KWTVVS 283 (302)
T ss_dssp ---SSBCCCEEEEETTTT---EEEECS
T ss_pred ---CcccccEEEEcCCCC---eEEECC
Confidence 112345789999999 999875
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.35 E-value=3.6e-11 Score=105.90 Aligned_cols=192 Identities=14% Similarity=0.078 Sum_probs=127.8
Q ss_pred CCCceEeec-CC---CeeeeEEEeCCCCceEecCCC-------------CCcccCCCeecC--CCcEEEecCCCCCCCc-
Q 042654 32 WNKPSVFED-WS---CYAHFVEYNILGNKIRPLRFD-------------TDSWCSSVVDMA--SRRIRYFRPCENGHYN- 91 (270)
Q Consensus 32 ~gkv~~~~~-~~---~~a~a~~yDp~T~t~~pl~v~-------------td~FCsgg~~L~--~~~~r~ydP~~~~~~~- 91 (270)
-+++.++++ .+ .......||+.+++|+.+... ..+|+-||..-. ...+..||+. +.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~---~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYT---ADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETT---CCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECC---CCCC
Confidence 356778887 22 345678899999999987621 122333332111 4568889987 456
Q ss_pred --eeeccccccccccccceeecCCCCCcEEEEcCCC----CceeEeccCCCCC-------CCCCCCCCCCceecccCCcC
Q 042654 92 --WKQLKWLLSDARWYASNQILPAANDRVILVGGRG----SFIYEFVPKLSSS-------SSDKNCPSSGSSVLLCLDHS 158 (270)
Q Consensus 92 --W~~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~----~~t~E~~ppL~~T-------~d~R~yp~sg~svmLPl~~~ 158 (270)
|++.+ .|..+|.+++++.+ | |+|+|+||.. ....|.|++...+ ..+|... +++.+
T Consensus 91 ~~W~~~~-~~p~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~---~~~~~----- 158 (301)
T 2vpj_A 91 GVWYSVA-PMNVRRGLAGATTL-G--DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGA---GLVVA----- 158 (301)
T ss_dssp CCCEEEC-CCSSCCBSCEEEEE-T--TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC---EEEEE-----
T ss_pred CeeEECC-CCCCCccceeEEEE-C--CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccc---eEEEE-----
Confidence 98765 58899999999888 6 7999999974 2357788763221 0133221 22222
Q ss_pred CCCceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEcCccccCC
Q 042654 159 NNFRKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIINGAKRGSA 237 (270)
Q Consensus 159 ~~y~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~gGa~~G~a 237 (270)
+++|+++||.... ..++...+.++ ...+|+.. +||.+|..+.++++ +++++|+||....
T Consensus 159 ----~~~iyv~GG~~~~-----------~~~~~~~~~d~--~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~-- 218 (301)
T 2vpj_A 159 ----SGVIYCLGGYDGL-----------NILNSVEKYDP--HTGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFDGT-- 218 (301)
T ss_dssp ----TTEEEEECCBCSS-----------CBCCCEEEEET--TTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSS--
T ss_pred ----CCEEEEECCCCCC-----------cccceEEEEeC--CCCcEEeCCCCCcccccceEEEE-CCEEEEEeCCCCC--
Confidence 4689999996432 12344444443 45789965 99999999988877 8899999997521
Q ss_pred CccCCCCCCccceeecCCCCCCCceeeccc
Q 042654 238 GWNNAASLSFRPYLYKPRKTLGKVFSSSLH 267 (270)
Q Consensus 238 G~~~a~~Pv~~pelYdP~~~~G~rft~~~~ 267 (270)
+ ..-.-++|||++. +|+++.+
T Consensus 219 ~------~~~~v~~yd~~~~---~W~~~~~ 239 (301)
T 2vpj_A 219 A------HLSSVEAYNIRTD---SWTTVTS 239 (301)
T ss_dssp S------BCCCEEEEETTTT---EEEEECC
T ss_pred c------ccceEEEEeCCCC---cEEECCC
Confidence 1 1235679999999 9998754
No 9
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.33 E-value=2.3e-11 Score=120.34 Aligned_cols=195 Identities=13% Similarity=0.130 Sum_probs=118.2
Q ss_pred CCCceEeecC-C---CeeeeEEEeCCCCceEecCC------CC-----------CcccCCC---eec---CCCcEEEecC
Q 042654 32 WNKPSVFEDW-S---CYAHFVEYNILGNKIRPLRF------DT-----------DSWCSSV---VDM---ASRRIRYFRP 84 (270)
Q Consensus 32 ~gkv~~~~~~-~---~~a~a~~yDp~T~t~~pl~v------~t-----------d~FCsgg---~~L---~~~~~r~ydP 84 (270)
-||+-++++. + .....++|||.+++|+.+.. .. .+|+-|+ .++ +...++.|||
T Consensus 297 dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~ 376 (656)
T 1k3i_A 297 DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYT 376 (656)
T ss_dssp TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEEC
T ss_pred CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeec
Confidence 6788888883 3 34567899999999998631 11 1112111 111 1567889999
Q ss_pred CCCCCCceeeccccccc------cccccceeec--CCCCCcEEEEcCCCC-------c---eeEeccCCCC--------C
Q 042654 85 CENGHYNWKQLKWLLSD------ARWYASNQIL--PAANDRVILVGGRGS-------F---IYEFVPKLSS--------S 138 (270)
Q Consensus 85 ~~~~~~~W~~~~~~M~~------~RWYpT~~tL--~D~~GrVliiGG~~~-------~---t~E~~ppL~~--------T 138 (270)
. +..|......+.. .|...++..+ .+ |+|+|+||.+. . ..|+|++-.. .
T Consensus 377 ~---~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~--~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~ 451 (656)
T 1k3i_A 377 S---GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVK--GKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNG 451 (656)
T ss_dssp S---TTCEEEEEEECEETTEECCCCBTCEEEEEETTT--TEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTC
T ss_pred C---CcceeecCCccccccccCCCCCCCceEeccCCC--CeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCC
Confidence 8 4567643222222 2445666664 47 99999999631 2 5788877221 1
Q ss_pred C-CCCCCCCCCceecccCCcCCCCceeEEEEEcCCCCCc-hhhhcccccccCCCceeEEEecCCCCceeec-CCCCCccc
Q 042654 139 S-SDKNCPSSGSSVLLCLDHSNNFRKVKVMVCGGAAAGA-YRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLL 215 (270)
Q Consensus 139 ~-d~R~yp~sg~svmLPl~~~~~y~~~~VLv~GG~~~~~-~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m 215 (270)
. .+|.+ .++++|| +++|+|+||...+. +. ......+..+.++ ...+|+.. .|+.+|..
T Consensus 452 mp~~R~~---~~~~~l~--------~g~i~v~GG~~~~~~~~------~~~~~~~v~~ydp--~t~~W~~~~~~~~~R~~ 512 (656)
T 1k3i_A 452 LYFARTF---HTSVVLP--------DGSTFITGGQRRGIPFE------DSTPVFTPEIYVP--EQDTFYKQNPNSIVRVY 512 (656)
T ss_dssp CSSCCBS---CEEEECT--------TSCEEEECCBSBCCTTC------CCSBCCCCEEEEG--GGTEEEECCCCSSCCCT
T ss_pred CCCCccc---CCeEECC--------CCCEEEECCcccCcCcC------CCCcccceEEEcC--CCCceeecCCCCCcccc
Confidence 1 13433 3456666 47999999975321 10 0112233333343 34789865 89999999
Q ss_pred Cc-eeecCCccEEEEcCccccCCCccCCCCCCccceeecCC
Q 042654 216 NN-MLILPTGHILIINGAKRGSAGWNNAASLSFRPYLYKPR 255 (270)
Q Consensus 216 ~~-~vlLPDG~Vli~gGa~~G~aG~~~a~~Pv~~pelYdP~ 255 (270)
|. +++||||+|||+||...|. + ..-.|..|+|.|.
T Consensus 513 hs~a~ll~dg~v~v~GG~~~~~--~---~~~~~~~e~~~Pp 548 (656)
T 1k3i_A 513 HSISLLLPDGRVFNGGGGLCGD--C---TTNHFDAQIFTPN 548 (656)
T ss_dssp TEEEEECTTSCEEEEECCCCTT--C---SCCCCEEEEEECG
T ss_pred ccHhhcCCCcEEEecCCCCCCC--C---CCCeeEEEEEeCh
Confidence 86 6678999999999965431 1 1235677777774
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.31 E-value=5.4e-11 Score=104.74 Aligned_cols=192 Identities=18% Similarity=0.202 Sum_probs=127.3
Q ss_pred cCCCceEeecCC---CeeeeEEEeCCCCc---eEecCCC-------------CCcccCCCeecC--CCcEEEecCCCCCC
Q 042654 31 QWNKPSVFEDWS---CYAHFVEYNILGNK---IRPLRFD-------------TDSWCSSVVDMA--SRRIRYFRPCENGH 89 (270)
Q Consensus 31 ~~gkv~~~~~~~---~~a~a~~yDp~T~t---~~pl~v~-------------td~FCsgg~~L~--~~~~r~ydP~~~~~ 89 (270)
.-|++-++++.+ ......+||+.+++ |+.+... ..++..||..-. ...+..||+. +
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~---~ 137 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPN---I 137 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETT---T
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCC---C
Confidence 346777777764 24467889999999 9877421 122333332211 4568899997 6
Q ss_pred CceeeccccccccccccceeecCCCCCcEEEEcCCC----CceeEeccCCCCC-------CCCCCCCCCCceecccCCcC
Q 042654 90 YNWKQLKWLLSDARWYASNQILPAANDRVILVGGRG----SFIYEFVPKLSSS-------SSDKNCPSSGSSVLLCLDHS 158 (270)
Q Consensus 90 ~~W~~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~----~~t~E~~ppL~~T-------~d~R~yp~sg~svmLPl~~~ 158 (270)
.+|+..+ .|..+|..++++.+ | |+|+|+||.+ ....|.|++-..+ ..+|. +.++..
T Consensus 138 ~~W~~~~-~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~----~~~~~~----- 204 (301)
T 2vpj_A 138 DQWSMLG-DMQTAREGAGLVVA-S--GVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRS----GAGVAL----- 204 (301)
T ss_dssp TEEEEEE-ECSSCCBSCEEEEE-T--TEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCB----SCEEEE-----
T ss_pred CeEEECC-CCCCCcccceEEEE-C--CEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccc----cceEEE-----
Confidence 7899754 58899999998887 7 8999999975 2456777762211 00332 222211
Q ss_pred CCCceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEcCccccCC
Q 042654 159 NNFRKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIINGAKRGSA 237 (270)
Q Consensus 159 ~~y~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~gGa~~G~a 237 (270)
...+|+|+||..... .++...+.++ ....|+.. .||.+|..+.++++ +|+++|+||...
T Consensus 205 ---~~~~i~v~GG~~~~~-----------~~~~v~~yd~--~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~--- 264 (301)
T 2vpj_A 205 ---LNDHIYVVGGFDGTA-----------HLSSVEAYNI--RTDSWTTVTSMTTPRCYVGATVL-RGRLYAIAGYDG--- 264 (301)
T ss_dssp ---ETTEEEEECCBCSSS-----------BCCCEEEEET--TTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCS---
T ss_pred ---ECCEEEEEeCCCCCc-----------ccceEEEEeC--CCCcEEECCCCCCcccceeEEEE-CCEEEEEcCcCC---
Confidence 236999999975321 1333333443 45789865 99999999998888 899999999642
Q ss_pred CccCCCCCCccceeecCCCCCCCceeecc
Q 042654 238 GWNNAASLSFRPYLYKPRKTLGKVFSSSL 266 (270)
Q Consensus 238 G~~~a~~Pv~~pelYdP~~~~G~rft~~~ 266 (270)
.+..-.-++|||++. +|+.+.
T Consensus 265 -----~~~~~~v~~yd~~~~---~W~~~~ 285 (301)
T 2vpj_A 265 -----NSLLSSIECYDPIID---SWEVVT 285 (301)
T ss_dssp -----SSBEEEEEEEETTTT---EEEEEE
T ss_pred -----CcccccEEEEcCCCC---eEEEcC
Confidence 112235689999998 999874
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.31 E-value=3.7e-11 Score=107.13 Aligned_cols=179 Identities=20% Similarity=0.201 Sum_probs=119.1
Q ss_pred eeEEEeCCCCceEecCC--------------CCCcccCCCeecC--------CCcEEEecCCCCCCCceeeccccccccc
Q 042654 46 HFVEYNILGNKIRPLRF--------------DTDSWCSSVVDMA--------SRRIRYFRPCENGHYNWKQLKWLLSDAR 103 (270)
Q Consensus 46 ~a~~yDp~T~t~~pl~v--------------~td~FCsgg~~L~--------~~~~r~ydP~~~~~~~W~~~~~~M~~~R 103 (270)
....|||.+++|+.... ...+++-||.... ...+..|||. +.+|++.+ .|..+|
T Consensus 14 ~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~---~~~W~~~~-~~p~~r 89 (315)
T 4asc_A 14 GAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL---DSEWLGMP-PLPSPR 89 (315)
T ss_dssp EEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT---TTEEEECC-CBSSCE
T ss_pred ceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC---CCeEEECC-CCCcch
Confidence 46789999999964322 1234444443110 2237789997 67898765 589999
Q ss_pred cccceeecCCCCCcEEEEcCCC-------CceeEeccCCCCC-------CCCCCCCCCCceecccCCcCCCCceeEEEEE
Q 042654 104 WYASNQILPAANDRVILVGGRG-------SFIYEFVPKLSSS-------SSDKNCPSSGSSVLLCLDHSNNFRKVKVMVC 169 (270)
Q Consensus 104 WYpT~~tL~D~~GrVliiGG~~-------~~t~E~~ppL~~T-------~d~R~yp~sg~svmLPl~~~~~y~~~~VLv~ 169 (270)
.+++++.+ + |+|+|+||.+ ....|.|++...+ ..+|. +.++.. ...+|+|+
T Consensus 90 ~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~----~~~~~~--------~~~~iyv~ 154 (315)
T 4asc_A 90 CLFGLGEA-L--NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVY----GHTVLS--------HMDLVYVI 154 (315)
T ss_dssp ESCEEEEE-T--TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCB----SCEEEE--------ETTEEEEE
T ss_pred hceeEEEE-C--CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccc----ceeEEE--------ECCEEEEE
Confidence 99999888 6 7999999952 2356777762211 11332 222222 24689999
Q ss_pred cCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEcCccccCCCccCCCCCCcc
Q 042654 170 GGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIINGAKRGSAGWNNAASLSFR 248 (270)
Q Consensus 170 GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~gGa~~G~aG~~~a~~Pv~~ 248 (270)
||...+. ..++...+.++ ...+|+.. +||.+|..+.++++ +++++|+||.... + ..-.
T Consensus 155 GG~~~~~----------~~~~~~~~yd~--~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~--~------~~~~ 213 (315)
T 4asc_A 155 GGKGSDR----------KCLNKMCVYDP--KKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDT--G------LTSS 213 (315)
T ss_dssp CCBCTTS----------CBCCCEEEEET--TTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSS--S------EEEE
T ss_pred eCCCCCC----------cccceEEEEeC--CCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCC--C------ccce
Confidence 9973211 23344555553 35689965 99999999999888 8899999997421 1 2235
Q ss_pred ceeecCCCCCCCceeeccc
Q 042654 249 PYLYKPRKTLGKVFSSSLH 267 (270)
Q Consensus 249 pelYdP~~~~G~rft~~~~ 267 (270)
-+.|||++. +|+++.+
T Consensus 214 ~~~yd~~~~---~W~~~~~ 229 (315)
T 4asc_A 214 AEVYSITDN---KWAPFEA 229 (315)
T ss_dssp EEEEETTTT---EEEEECC
T ss_pred EEEEECCCC---eEEECCC
Confidence 689999999 9998864
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.26 E-value=2.9e-11 Score=107.95 Aligned_cols=192 Identities=17% Similarity=0.180 Sum_probs=124.0
Q ss_pred CCceEeecCCCeeeeEEEeCCCCceEecCC--------------CCCcccCCCeecC--------CCcEEEecCCCCCCC
Q 042654 33 NKPSVFEDWSCYAHFVEYNILGNKIRPLRF--------------DTDSWCSSVVDMA--------SRRIRYFRPCENGHY 90 (270)
Q Consensus 33 gkv~~~~~~~~~a~a~~yDp~T~t~~pl~v--------------~td~FCsgg~~L~--------~~~~r~ydP~~~~~~ 90 (270)
+++.++++.+ ...|||.+++|..... ...+|+-||.... ...+..|||. +.
T Consensus 16 ~~i~~~GG~~----~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~---~~ 88 (318)
T 2woz_A 16 DLILLVNDTA----AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV---SS 88 (318)
T ss_dssp EEEEEECSSE----EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT---TT
T ss_pred chhhhccccc----eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC---CC
Confidence 3566676643 5789999999976321 1234555553211 1127789998 67
Q ss_pred ceeeccccccccccccceeecCCCCCcEEEEcCCCC------ceeEeccCCCCCCC---CCCCCCCCceecccCCcCCCC
Q 042654 91 NWKQLKWLLSDARWYASNQILPAANDRVILVGGRGS------FIYEFVPKLSSSSS---DKNCPSSGSSVLLCLDHSNNF 161 (270)
Q Consensus 91 ~W~~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~~------~t~E~~ppL~~T~d---~R~yp~sg~svmLPl~~~~~y 161 (270)
+|.+.+ .|..+|.+++++.+ + |+|+|+||... ...|.|++...+-. .-..|..+.++..
T Consensus 89 ~W~~~~-~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-------- 156 (318)
T 2woz_A 89 EWVGLP-PLPSARCLFGLGEV-D--DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-------- 156 (318)
T ss_dssp EEEECS-CBSSCBCSCEEEEE-T--TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--------
T ss_pred cEEECC-CCCccccccceEEE-C--CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--------
Confidence 998765 59999999999888 6 79999999741 34677776221100 0011111222222
Q ss_pred ceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEcCccccCCCcc
Q 042654 162 RKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIINGAKRGSAGWN 240 (270)
Q Consensus 162 ~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~gGa~~G~aG~~ 240 (270)
.+++|+|+||...+. ..++...+.++ ...+|+.. +||.+|..+.++++ +|+++|+||... .+
T Consensus 157 ~~~~iyv~GG~~~~~----------~~~~~~~~yd~--~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~--~~-- 219 (318)
T 2woz_A 157 HNGMIYCLGGKTDDK----------KCTNRVFIYNP--KKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTE--DG-- 219 (318)
T ss_dssp ETTEEEEECCEESSS----------CBCCCEEEEET--TTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEET--TE--
T ss_pred ECCEEEEEcCCCCCC----------CccceEEEEcC--CCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCC--CC--
Confidence 246999999964211 12344444443 35789965 99999999998887 889999999752 11
Q ss_pred CCCCCCccceeecCCCCCCCceeeccc
Q 042654 241 NAASLSFRPYLYKPRKTLGKVFSSSLH 267 (270)
Q Consensus 241 ~a~~Pv~~pelYdP~~~~G~rft~~~~ 267 (270)
..-.-++|||++. +|+++.+
T Consensus 220 ----~~~~~~~yd~~~~---~W~~~~~ 239 (318)
T 2woz_A 220 ----LSASVEAFDLKTN---KWEVMTE 239 (318)
T ss_dssp ----EEEEEEEEETTTC---CEEECCC
T ss_pred ----ccceEEEEECCCC---eEEECCC
Confidence 1224679999999 9998754
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.24 E-value=2.1e-10 Score=102.22 Aligned_cols=199 Identities=13% Similarity=0.139 Sum_probs=128.9
Q ss_pred cCCCceEeecC-----C--C--eeeeEEEeCCCCceEecCC-------------CCCcccCCCeec-----CCCcEEEec
Q 042654 31 QWNKPSVFEDW-----S--C--YAHFVEYNILGNKIRPLRF-------------DTDSWCSSVVDM-----ASRRIRYFR 83 (270)
Q Consensus 31 ~~gkv~~~~~~-----~--~--~a~a~~yDp~T~t~~pl~v-------------~td~FCsgg~~L-----~~~~~r~yd 83 (270)
.-|++-++++. . . ......||+.+++|+.+.. ...++.-||... ....+..||
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d 123 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYD 123 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEEC
Confidence 35677888874 1 1 2346789999999988752 123444555332 156789999
Q ss_pred CCCCCCCceeeccccccccccccceeecCCCCCcEEEEcCCC-----CceeEeccCCCC-------CCCCCCCCCCCcee
Q 042654 84 PCENGHYNWKQLKWLLSDARWYASNQILPAANDRVILVGGRG-----SFIYEFVPKLSS-------SSSDKNCPSSGSSV 151 (270)
Q Consensus 84 P~~~~~~~W~~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~-----~~t~E~~ppL~~-------T~d~R~yp~sg~sv 151 (270)
|. +.+|++.+ .|..+|..++++.+ + |+|+|+||.. ....|.|++-.. ...+|... +++
T Consensus 124 ~~---~~~W~~~~-~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~ 193 (315)
T 4asc_A 124 RL---SFKWGESD-PLPYVVYGHTVLSH-M--DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLF---GAT 193 (315)
T ss_dssp TT---TTEEEECC-CCSSCCBSCEEEEE-T--TEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSC---EEE
T ss_pred CC---CCcEeECC-CCCCcccceeEEEE-C--CEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhce---EEE
Confidence 98 57899765 58899999998885 5 6999999972 245777876221 11133321 222
Q ss_pred cccCCcCCCCceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEc
Q 042654 152 LLCLDHSNNFRKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIIN 230 (270)
Q Consensus 152 mLPl~~~~~y~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~g 230 (270)
.+ +.+|+|+||..... .++...+.+ ....+|+.. +||.+|..+.++++ +|+++|+|
T Consensus 194 ~~---------~~~iyv~GG~~~~~-----------~~~~~~~yd--~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~G 250 (315)
T 4asc_A 194 VH---------DGRIIVAAGVTDTG-----------LTSSAEVYS--ITDNKWAPFEAFPQERSSLSLVSL-VGTLYAIG 250 (315)
T ss_dssp EE---------TTEEEEEEEECSSS-----------EEEEEEEEE--TTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEE
T ss_pred EE---------CCEEEEEeccCCCC-----------ccceEEEEE--CCCCeEEECCCCCCcccceeEEEE-CCEEEEEC
Confidence 22 46999999965321 112233333 345689965 99999999988887 88999999
Q ss_pred CccccCCCccCCC---CCCccceeecCCCCCCCceeeccc
Q 042654 231 GAKRGSAGWNNAA---SLSFRPYLYKPRKTLGKVFSSSLH 267 (270)
Q Consensus 231 Ga~~G~aG~~~a~---~Pv~~pelYdP~~~~G~rft~~~~ 267 (270)
|.... ... ... ...-.-+.|||++. +|+++.+
T Consensus 251 G~~~~-~~~-~~~~~~~~~~~v~~yd~~~~---~W~~~~~ 285 (315)
T 4asc_A 251 GFATL-ETE-SGELVPTELNDIWRYNEEEK---KWEGVLR 285 (315)
T ss_dssp EEEEE-ECT-TSCEEEEEEEEEEEEETTTT---EEEEEES
T ss_pred Ccccc-CcC-CccccccccCcEEEecCCCC---hhhhhcc
Confidence 97521 000 000 11224579999999 9998844
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.21 E-value=3.4e-10 Score=113.88 Aligned_cols=204 Identities=13% Similarity=0.082 Sum_probs=131.2
Q ss_pred CCCceEeecCC--CeeeeEEEeCCCCceEecC-------CCCCcccCCCeec--C---------------CCcEEEecCC
Q 042654 32 WNKPSVFEDWS--CYAHFVEYNILGNKIRPLR-------FDTDSWCSSVVDM--A---------------SRRIRYFRPC 85 (270)
Q Consensus 32 ~gkv~~~~~~~--~~a~a~~yDp~T~t~~pl~-------v~td~FCsgg~~L--~---------------~~~~r~ydP~ 85 (270)
-+++-++++.+ .......||+.+++|+.+. ....-.|.+..++ . ...+..||+.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 46677788764 3455778999999998776 2222222222222 1 3567888887
Q ss_pred CCCCCceeeccccccccccccceeecCCCCCcEEEEcCCCCc-eeEeccCCCC-------CCCCCCCCCCCce-ecccCC
Q 042654 86 ENGHYNWKQLKWLLSDARWYASNQILPAANDRVILVGGRGSF-IYEFVPKLSS-------SSSDKNCPSSGSS-VLLCLD 156 (270)
Q Consensus 86 ~~~~~~W~~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~~~-t~E~~ppL~~-------T~d~R~yp~sg~s-vmLPl~ 156 (270)
+.+|+..+ .|..+|++++++.+.+ |+|+|+||.+.. ..|.|++-.. +.+ .-.|..+.+ +.+..
T Consensus 477 ---t~~W~~~~-~~p~~R~~h~~~~~~~--~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~-~p~~r~~~~a~v~~~- 548 (695)
T 2zwa_A 477 ---TREWSMIK-SLSHTRFRHSACSLPD--GNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDE-FFQNSLVSAGLEFDP- 548 (695)
T ss_dssp ---TTEEEECC-CCSBCCBSCEEEECTT--SCEEEECCBCSSCSEEEEETTTTEEEECCCSSG-GGGSCCBSCEEEEET-
T ss_pred ---CCcEEECC-CCCCCcccceEEEEcC--CEEEEECCCCCCCCEEEEECCCCceEEccCCCC-CCCcccceeEEEEeC-
Confidence 57898764 5899999999999989 999999998433 6888876221 110 011222223 33321
Q ss_pred cCCCCceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCC----Cceeec-CC-CCCcccCceeecCCccEEEEc
Q 042654 157 HSNNFRKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNK----HVWKME-HM-PEPRLLNNMLILPTGHILIIN 230 (270)
Q Consensus 157 ~~~~y~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~----~~W~~e-~M-p~~R~m~~~vlLPDG~Vli~g 230 (270)
..++|+|+||...+. ...++...+.++.... -.|+.. +| +.+|..+.++++.||+++|+|
T Consensus 549 -----~~~~iyv~GG~~~~~---------~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~G 614 (695)
T 2zwa_A 549 -----VSKQGIILGGGFMDQ---------TTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVG 614 (695)
T ss_dssp -----TTTEEEEECCBCTTS---------SCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEEC
T ss_pred -----CCCEEEEECCcCCCC---------CeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEEC
Confidence 127999999975321 0123445555654221 128754 66 589999999999989999999
Q ss_pred CccccCCCccCCCCCCccceeecCCCCCCCceeec
Q 042654 231 GAKRGSAGWNNAASLSFRPYLYKPRKTLGKVFSSS 265 (270)
Q Consensus 231 Ga~~G~aG~~~a~~Pv~~pelYdP~~~~G~rft~~ 265 (270)
|..... .....-.-++|||.+. +|+.+
T Consensus 615 G~~~~~-----~~~~~~~v~~yd~~t~---~W~~~ 641 (695)
T 2zwa_A 615 GTSPSG-----LFDRTNSIISLDPLSE---TLTSI 641 (695)
T ss_dssp CBCSSC-----CCCTTTSEEEEETTTT---EEEEC
T ss_pred CccCCC-----CCCCCCeEEEEECCCC---eEEEe
Confidence 975211 0122345689999999 99864
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.20 E-value=6.6e-10 Score=99.13 Aligned_cols=201 Identities=14% Similarity=0.172 Sum_probs=124.6
Q ss_pred cCCCceEeecCCC---------eeeeEEEeCCCCceEecCCC-C------------CcccCCCeecC----CCcEEEecC
Q 042654 31 QWNKPSVFEDWSC---------YAHFVEYNILGNKIRPLRFD-T------------DSWCSSVVDMA----SRRIRYFRP 84 (270)
Q Consensus 31 ~~gkv~~~~~~~~---------~a~a~~yDp~T~t~~pl~v~-t------------d~FCsgg~~L~----~~~~r~ydP 84 (270)
.-|++-++++... ......||+.+++|+.+... . .++..||.... ...+..||+
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~ 134 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDP 134 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeC
Confidence 3467888887421 11256899999999988531 1 12222222110 245788998
Q ss_pred CCCCCCceeeccccccccccccceeecCCCCCcEEEEcCCC-----CceeEeccCCCCC-------CCCCCCCCCCceec
Q 042654 85 CENGHYNWKQLKWLLSDARWYASNQILPAANDRVILVGGRG-----SFIYEFVPKLSSS-------SSDKNCPSSGSSVL 152 (270)
Q Consensus 85 ~~~~~~~W~~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~-----~~t~E~~ppL~~T-------~d~R~yp~sg~svm 152 (270)
. +.+|++.+ .|..+|..++++. .+ |+|+|+||.. ....|.|++-..+ ..+|... +++.
T Consensus 135 ~---~~~W~~~~-~~p~~r~~~~~~~-~~--~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~~ 204 (318)
T 2woz_A 135 V---AAKWSEVK-NLPIKVYGHNVIS-HN--GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMF---GVAI 204 (318)
T ss_dssp T---TTEEEEEC-CCSSCEESCEEEE-ET--TEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSC---EEEE
T ss_pred C---CCCEeECC-CCCCcccccEEEE-EC--CEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccc---eEEE
Confidence 7 67998755 5889999999887 56 7999999962 3457777762211 1133321 2222
Q ss_pred ccCCcCCCCceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCCceeec-CCCCCcccCceeecCCccEEEEcC
Q 042654 153 LCLDHSNNFRKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVWKME-HMPEPRLLNNMLILPTGHILIING 231 (270)
Q Consensus 153 LPl~~~~~y~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R~m~~~vlLPDG~Vli~gG 231 (270)
+ +++|+|+||...... .+...+.+ ....+|+.. +||.+|..+.++++ +|+++|+||
T Consensus 205 ~---------~~~iyv~GG~~~~~~-----------~~~~~~yd--~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG 261 (318)
T 2woz_A 205 H---------KGKIVIAGGVTEDGL-----------SASVEAFD--LKTNKWEVMTEFPQERSSISLVSL-AGSLYAIGG 261 (318)
T ss_dssp E---------TTEEEEEEEEETTEE-----------EEEEEEEE--TTTCCEEECCCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred E---------CCEEEEEcCcCCCCc-----------cceEEEEE--CCCCeEEECCCCCCcccceEEEEE-CCEEEEECC
Confidence 2 469999999643211 12223333 345789965 99999999887766 789999999
Q ss_pred ccccCCCcc-CCCCCCccceeecCCCCCCCceeeccc
Q 042654 232 AKRGSAGWN-NAASLSFRPYLYKPRKTLGKVFSSSLH 267 (270)
Q Consensus 232 a~~G~aG~~-~a~~Pv~~pelYdP~~~~G~rft~~~~ 267 (270)
........+ ......-.-+.|||++. +|+++.|
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~ 295 (318)
T 2woz_A 262 FAMIQLESKEFAPTEVNDIWKYEDDKK---EWAGMLK 295 (318)
T ss_dssp BCCBC----CCBCCBCCCEEEEETTTT---EEEEEES
T ss_pred eeccCCCCceeccceeeeEEEEeCCCC---Eehhhcc
Confidence 753110000 00122335678999999 9998744
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.15 E-value=5.5e-10 Score=100.78 Aligned_cols=203 Identities=10% Similarity=0.083 Sum_probs=121.4
Q ss_pred CCCceEeecCCCeeeeEEEeCCC--CceEecCC-C-------------CCcccCCCeec-------CCCcEEEecCCCCC
Q 042654 32 WNKPSVFEDWSCYAHFVEYNILG--NKIRPLRF-D-------------TDSWCSSVVDM-------ASRRIRYFRPCENG 88 (270)
Q Consensus 32 ~gkv~~~~~~~~~a~a~~yDp~T--~t~~pl~v-~-------------td~FCsgg~~L-------~~~~~r~ydP~~~~ 88 (270)
-+++-++++.+.. ....||+.+ ++|+.+.- . ..+|.-||... ....+..|||.
T Consensus 19 ~~~iyv~GG~~~~-~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~--- 94 (357)
T 2uvk_A 19 NDTVYIGLGSAGT-AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK--- 94 (357)
T ss_dssp TTEEEEECGGGTT-CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETT---
T ss_pred CCEEEEEeCcCCC-eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCC---
Confidence 4667777776532 456899984 89987752 1 12333344311 14568899998
Q ss_pred CCceeecccccc-ccccccceeecCCCCCcEEEEcCCC--------------------------------------Ccee
Q 042654 89 HYNWKQLKWLLS-DARWYASNQILPAANDRVILVGGRG--------------------------------------SFIY 129 (270)
Q Consensus 89 ~~~W~~~~~~M~-~~RWYpT~~tL~D~~GrVliiGG~~--------------------------------------~~t~ 129 (270)
+..|++.+ .|. .+|..++++. .+ |+|+|+||.+ ....
T Consensus 95 ~~~W~~~~-~~~p~~r~~~~~~~-~~--~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 170 (357)
T 2uvk_A 95 TNSWVKLM-SHAPMGMAGHVTFV-HN--GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFL 170 (357)
T ss_dssp TTEEEECS-CCCSSCCSSEEEEE-ET--TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEE
T ss_pred CCcEEECC-CCCCcccccceEEE-EC--CEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccE
Confidence 67899765 488 9999999888 67 7999999974 2467
Q ss_pred EeccCCCCCC------C-CCCCCCCCceecccCCcCCCCceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCC
Q 042654 130 EFVPKLSSSS------S-DKNCPSSGSSVLLCLDHSNNFRKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKH 202 (270)
Q Consensus 130 E~~ppL~~T~------d-~R~yp~sg~svmLPl~~~~~y~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~ 202 (270)
|.|++...+- + +|.+ +.++.. ...+|+|+||..... ..+....+.+++....
T Consensus 171 ~~yd~~~~~W~~~~~~p~~~~~---~~~~~~--------~~~~iyv~GG~~~~~----------~~~~~v~~~d~d~~~~ 229 (357)
T 2uvk_A 171 LSFDPSTQQWSYAGESPWYGTA---GAAVVN--------KGDKTWLINGEAKPG----------LRTDAVFELDFTGNNL 229 (357)
T ss_dssp EEEETTTTEEEEEEECSSCCCB---SCEEEE--------ETTEEEEECCEEETT----------EECCCEEEEECC---C
T ss_pred EEEeCCCCcEEECCCCCCCCcc---cccEEE--------ECCEEEEEeeecCCC----------cccCceEEEEecCCCC
Confidence 8887632210 0 1211 122111 246999999964210 1223344455544668
Q ss_pred ceeec-CCCCCcc-cCceeecCCccEEEEcCccccCC------C--c-cCCCCCCccceeecCCCCCCCceeecc
Q 042654 203 VWKME-HMPEPRL-LNNMLILPTGHILIINGAKRGSA------G--W-NNAASLSFRPYLYKPRKTLGKVFSSSL 266 (270)
Q Consensus 203 ~W~~e-~Mp~~R~-m~~~vlLPDG~Vli~gGa~~G~a------G--~-~~a~~Pv~~pelYdP~~~~G~rft~~~ 266 (270)
+|+.. .|+.+|. ++-++++-+++|+|+||...... | | .........-++|||++. +|+++.
T Consensus 230 ~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~ 301 (357)
T 2uvk_A 230 KWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSG 301 (357)
T ss_dssp EEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC------CEEEE
T ss_pred cEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC---ceeeCC
Confidence 89975 8887764 33345566899999999753100 0 0 011223456789999998 999874
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.78 E-value=4.6e-08 Score=88.17 Aligned_cols=160 Identities=18% Similarity=0.193 Sum_probs=87.7
Q ss_pred CcEEEecCCCCCCCceeeccccccccccc-cceeecCCCCCcEEEEcCCC-----CceeEecc--C-------CCCCCCC
Q 042654 77 RRIRYFRPCENGHYNWKQLKWLLSDARWY-ASNQILPAANDRVILVGGRG-----SFIYEFVP--K-------LSSSSSD 141 (270)
Q Consensus 77 ~~~r~ydP~~~~~~~W~~~~~~M~~~RWY-pT~~tL~D~~GrVliiGG~~-----~~t~E~~p--p-------L~~T~d~ 141 (270)
+.+..|||. +.+|+... .|..+|.+ ++++.+ + ++++|+||.. ....+.|+ | +.....+
T Consensus 168 ~~v~~yd~~---~~~W~~~~-~~p~~~~~~~~~~~~-~--~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~ 240 (357)
T 2uvk_A 168 KFLLSFDPS---TQQWSYAG-ESPWYGTAGAAVVNK-G--DKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSP 240 (357)
T ss_dssp CEEEEEETT---TTEEEEEE-ECSSCCCBSCEEEEE-T--TEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTT
T ss_pred ccEEEEeCC---CCcEEECC-CCCCCCcccccEEEE-C--CEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCC
Confidence 578899998 67998754 57777877 666665 6 7999999963 12233342 2 1111002
Q ss_pred CCCCCCCc-eecccCCcCCCCceeEEEEEcCCCCCchhhhc-ccc-----cccCCCceeEEEecCCCCceeec-CCCCCc
Q 042654 142 KNCPSSGS-SVLLCLDHSNNFRKVKVMVCGGAAAGAYRVAA-QGR-----FLKGLSSCGTMVLTRNKHVWKME-HMPEPR 213 (270)
Q Consensus 142 R~yp~sg~-svmLPl~~~~~y~~~~VLv~GG~~~~~~~~~~-~~~-----~~pAs~~~~~I~l~~~~~~W~~e-~Mp~~R 213 (270)
|.. .+. ++.+ ..+|+|+||.......... ... .........+.++ ...+|+.. .||.+|
T Consensus 241 ~~~--~~~~~~~~---------~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r 307 (357)
T 2uvk_A 241 DGV--AGGFAGIS---------NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLW--HNGKWDKSGELSQGR 307 (357)
T ss_dssp TCC--BSCEEEEE---------TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEEC--C---CEEEEECSSCC
T ss_pred ccc--ccceEEEE---------CCEEEEEcCccccCCcccccccceeccccccceeeEEEEec--CCCceeeCCCCCCCc
Confidence 211 122 2222 4699999996432110000 000 0011122233333 36789965 999999
Q ss_pred ccCceeecCCccEEEEcCccccCCCccCCCCCCccceeecCCCCCCCceeeccc
Q 042654 214 LLNNMLILPTGHILIINGAKRGSAGWNNAASLSFRPYLYKPRKTLGKVFSSSLH 267 (270)
Q Consensus 214 ~m~~~vlLPDG~Vli~gGa~~G~aG~~~a~~Pv~~pelYdP~~~~G~rft~~~~ 267 (270)
..+.++++ +|+|+|+||.... + . ..-.-++|+-+.+ +|.++-|
T Consensus 308 ~~~~~~~~-~~~i~v~GG~~~~--~--~---~~~~v~~l~~~~~---~~~~~~~ 350 (357)
T 2uvk_A 308 AYGVSLPW-NNSLLIIGGETAG--G--K---AVTDSVLITVKDN---KVTVQNL 350 (357)
T ss_dssp BSSEEEEE-TTEEEEEEEECGG--G--C---EEEEEEEEEC-CC---SCEEEC-
T ss_pred ccceeEEe-CCEEEEEeeeCCC--C--C---EeeeEEEEEEcCc---EeEeeec
Confidence 99888664 8999999997521 1 0 0112345688877 8877654
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.68 E-value=1.2e-07 Score=95.25 Aligned_cols=162 Identities=14% Similarity=0.117 Sum_probs=106.9
Q ss_pred CCcccCCCee-cCCCcEEEecCCCCCCCceeecc-c----cccccccccceeecC-CCCCcEEEEcCCCC-----ceeEe
Q 042654 64 TDSWCSSVVD-MASRRIRYFRPCENGHYNWKQLK-W----LLSDARWYASNQILP-AANDRVILVGGRGS-----FIYEF 131 (270)
Q Consensus 64 td~FCsgg~~-L~~~~~r~ydP~~~~~~~W~~~~-~----~M~~~RWYpT~~tL~-D~~GrVliiGG~~~-----~t~E~ 131 (270)
..++.-||.. .....+..|||. +.+|+..+ . .|..+|++++++.+. + |+|+|+||.+. ...+.
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~---~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~--~~lyv~GG~~~~~~~~~dv~~ 472 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIH---YDKIDMKNIEVSSSEVPVARMCHTFTTISRN--NQLLLIGGRKAPHQGLSDNWI 472 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEEC---SSCEEEEECCCCCSCCCCCCBSCEEEEETTT--TEEEEECCBSSTTCBCCCCEE
T ss_pred CEEEEECCCCCCCcCcEEEEECC---CCeEEEeccCCCCCCCCccccceEEEEEccC--CEEEEEcCCCCCCCccccEEE
Confidence 4455555532 125678899998 67899754 2 488999999999998 8 99999999743 34677
Q ss_pred ccCCCCC-------CCCCCCCCCCceecccCCcCCCCceeEEEEEcCCCCCchhhhcccccccCCCceeEEEecCCCCce
Q 042654 132 VPKLSSS-------SSDKNCPSSGSSVLLCLDHSNNFRKVKVMVCGGAAAGAYRVAAQGRFLKGLSSCGTMVLTRNKHVW 204 (270)
Q Consensus 132 ~ppL~~T-------~d~R~yp~sg~svmLPl~~~~~y~~~~VLv~GG~~~~~~~~~~~~~~~pAs~~~~~I~l~~~~~~W 204 (270)
|++...+ ..+|... +++++. .++|+|+||..... .+.+.+ .....|
T Consensus 473 yd~~t~~W~~~~~~p~~R~~h---~~~~~~--------~~~iyv~GG~~~~~--------------~v~~yd--~~t~~W 525 (695)
T 2zwa_A 473 FDMKTREWSMIKSLSHTRFRH---SACSLP--------DGNVLILGGVTEGP--------------AMLLYN--VTEEIF 525 (695)
T ss_dssp EETTTTEEEECCCCSBCCBSC---EEEECT--------TSCEEEECCBCSSC--------------SEEEEE--TTTTEE
T ss_pred EeCCCCcEEECCCCCCCcccc---eEEEEc--------CCEEEEECCCCCCC--------------CEEEEE--CCCCce
Confidence 7762211 1134332 233332 46999999965311 333444 345789
Q ss_pred eec-C---CCCCcccCceeecC-C-ccEEEEcCccccCCCccCCCCCCccceeecCCCCCCCc------eeecc
Q 042654 205 KME-H---MPEPRLLNNMLILP-T-GHILIINGAKRGSAGWNNAASLSFRPYLYKPRKTLGKV------FSSSL 266 (270)
Q Consensus 205 ~~e-~---Mp~~R~m~~~vlLP-D-G~Vli~gGa~~G~aG~~~a~~Pv~~pelYdP~~~~G~r------ft~~~ 266 (270)
+.. . ||.+|..+.++++- + |+++|+||.... | ....-.-+.|||.+. + |+++.
T Consensus 526 ~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~--~----~~~~~~v~~yd~~~~---~w~~~~~W~~~~ 590 (695)
T 2zwa_A 526 KDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMD--Q----TTVSDKAIIFKYDAE---NATEPITVIKKL 590 (695)
T ss_dssp EECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTT--S----SCBCCEEEEEEECTT---CSSCCEEEEEEE
T ss_pred EEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCC--C----CeeeCcEEEEEccCC---ccccceEEEEcC
Confidence 854 3 99999999966653 3 899999997431 1 112234678999998 6 77764
No 19
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=86.57 E-value=8.5 Score=33.22 Aligned_cols=81 Identities=11% Similarity=-0.063 Sum_probs=45.4
Q ss_pred ceEeecCCCeeeeEEEeCCCCceEec-CC-----CCC-cccCCCeecC--CCcEEEecCCCCCCCceeeccccccccccc
Q 042654 35 PSVFEDWSCYAHFVEYNILGNKIRPL-RF-----DTD-SWCSSVVDMA--SRRIRYFRPCENGHYNWKQLKWLLSDARWY 105 (270)
Q Consensus 35 v~~~~~~~~~a~a~~yDp~T~t~~pl-~v-----~td-~FCsgg~~L~--~~~~r~ydP~~~~~~~W~~~~~~M~~~RWY 105 (270)
+.+.+..+. .-.+||++|+++.-- .. .++ .+-+.|.++. .+.+..|||. +.-.|.-... ...-.
T Consensus 7 ~lv~~~~~~--~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~~--G~~~W~~~~~---~~~~~ 79 (276)
T 3no2_A 7 LLVGGSGWN--KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRD--GRELWNIAAP---AGCEM 79 (276)
T ss_dssp EEEECTTCS--EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECTT--SCEEEEEECC---TTCEE
T ss_pred EEEeeCCCC--EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECCC--CCEEEEEcCC---CCccc
Confidence 344443333 344789888864321 11 122 2224444444 5678899993 3567863211 11224
Q ss_pred cceeecCCCCCcEEEEcCC
Q 042654 106 ASNQILPAANDRVILVGGR 124 (270)
Q Consensus 106 pT~~tL~D~~GrVliiGG~ 124 (270)
.+...++| |++||....
T Consensus 80 ~~~~~~~d--G~~lv~~~~ 96 (276)
T 3no2_A 80 QTARILPD--GNALVAWCG 96 (276)
T ss_dssp EEEEECTT--SCEEEEEES
T ss_pred cccEECCC--CCEEEEecC
Confidence 57889999 999998665
No 20
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=67.42 E-value=59 Score=27.83 Aligned_cols=81 Identities=9% Similarity=0.077 Sum_probs=48.2
Q ss_pred eeEEEeCCCCceEec-CCC----CCcccCCCeec-C----CCcEEEecCCCCCCCceeeccccccccccccceeecCCCC
Q 042654 46 HFVEYNILGNKIRPL-RFD----TDSWCSSVVDM-A----SRRIRYFRPCENGHYNWKQLKWLLSDARWYASNQILPAAN 115 (270)
Q Consensus 46 ~a~~yDp~T~t~~pl-~v~----td~FCsgg~~L-~----~~~~r~ydP~~~~~~~W~~~~~~M~~~RWYpT~~tL~D~~ 115 (270)
.-.+||+.+++.... ... .-.|.+.+..+ . ...+++||... ..... .+..+..-.....-+|
T Consensus 13 ~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~---~~~~~---~~~~~~~v~~~~~spd-- 84 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT---NNVIA---TVPAGSSPQGVAVSPD-- 84 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTT---TEEEE---EEECSSSEEEEEECTT--
T ss_pred EEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCC---CeEEE---EEECCCCccceEECCC--
Confidence 356799988875432 222 22455555543 2 57799998863 22221 2333333345556689
Q ss_pred CcEEEEcCCCCceeEeccC
Q 042654 116 DRVILVGGRGSFIYEFVPK 134 (270)
Q Consensus 116 GrVliiGG~~~~t~E~~pp 134 (270)
|+.|+++|.....+.+|+.
T Consensus 85 g~~l~~~~~~~~~v~v~d~ 103 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDT 103 (391)
T ss_dssp SSEEEEEETTTTEEEEEET
T ss_pred CCEEEEEECCCCEEEEEEC
Confidence 9988888776677788874
No 21
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=59.60 E-value=95 Score=27.56 Aligned_cols=91 Identities=7% Similarity=0.021 Sum_probs=50.0
Q ss_pred ceEeecCCCeeeeEEEeCCCCceEec-C-------CCCCcccC-CCeecC----CCcEEEecCCCCCCCceeeccccccc
Q 042654 35 PSVFEDWSCYAHFVEYNILGNKIRPL-R-------FDTDSWCS-SVVDMA----SRRIRYFRPCENGHYNWKQLKWLLSD 101 (270)
Q Consensus 35 v~~~~~~~~~a~a~~yDp~T~t~~pl-~-------v~td~FCs-gg~~L~----~~~~r~ydP~~~~~~~W~~~~~~M~~ 101 (270)
....+..|. .-.+||+.+++...+ . |..=.|++ .+..|. .+.++++|-.. .........-..
T Consensus 134 ~lasGs~dg--~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~~~ 208 (435)
T 4e54_B 134 TVAVGSKGG--DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG---NILRVFASSDTI 208 (435)
T ss_dssp CEEEEETTS--CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS---CEEEEEECCSSC
T ss_pred EEEEEeCCC--EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC---CceeEEeccCCC
Confidence 444555554 356899987753322 1 12223553 333333 67799998652 111111111223
Q ss_pred cccccceeecCCCCCcEEEEcCCCCceeEecc
Q 042654 102 ARWYASNQILPAANDRVILVGGRGSFIYEFVP 133 (270)
Q Consensus 102 ~RWYpT~~tL~D~~GrVliiGG~~~~t~E~~p 133 (270)
.-|.-+...-+| |++|++|+.+. ++.+|+
T Consensus 209 ~~~~~~~~~~~~--~~~l~~g~~dg-~i~~wd 237 (435)
T 4e54_B 209 NIWFCSLDVSAS--SRMVVTGDNVG-NVILLN 237 (435)
T ss_dssp SCCCCCEEEETT--TTEEEEECSSS-BEEEEE
T ss_pred CccEEEEEECCC--CCEEEEEeCCC-cEeeec
Confidence 445666777789 99999998743 556665
No 22
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=58.00 E-value=88 Score=26.63 Aligned_cols=80 Identities=10% Similarity=-0.015 Sum_probs=43.8
Q ss_pred EEEeCCCCc-eEecCCC------CCcccC--CCeecC----CCcEEEecCCCCCCCceeeccccccccccccceeecCCC
Q 042654 48 VEYNILGNK-IRPLRFD------TDSWCS--SVVDMA----SRRIRYFRPCENGHYNWKQLKWLLSDARWYASNQILPAA 114 (270)
Q Consensus 48 ~~yDp~T~t-~~pl~v~------td~FCs--gg~~L~----~~~~r~ydP~~~~~~~W~~~~~~M~~~RWYpT~~tL~D~ 114 (270)
.+||..+.+ .+..... .-.|.+ .+..+. .+.+++||.... .+... .. .......-+...-||
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~-~~~~~-~~--~~~~~~i~~~~~~pd- 181 (343)
T 3lrv_A 107 TILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD-SQYIV-HS--AKSDVEYSSGVLHKD- 181 (343)
T ss_dssp EEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSS-CEEEE-EC--CCSSCCCCEEEECTT-
T ss_pred EEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC-cEEEE-Ee--cCCCCceEEEEECCC-
Confidence 446777776 3333321 122334 344444 678999997632 22111 10 112223556677789
Q ss_pred CCcEEEEcCCCCceeEeccC
Q 042654 115 NDRVILVGGRGSFIYEFVPK 134 (270)
Q Consensus 115 ~GrVliiGG~~~~t~E~~pp 134 (270)
|++|++|+.+ .++.+|+.
T Consensus 182 -g~~lasg~~d-g~i~iwd~ 199 (343)
T 3lrv_A 182 -SLLLALYSPD-GILDVYNL 199 (343)
T ss_dssp -SCEEEEECTT-SCEEEEES
T ss_pred -CCEEEEEcCC-CEEEEEEC
Confidence 9999999874 46777763
No 23
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=57.59 E-value=78 Score=25.91 Aligned_cols=88 Identities=9% Similarity=-0.045 Sum_probs=47.6
Q ss_pred ceEeecCCCeeeeEEEeCCCCceEe-cCC-----CCCcccCCCeecC----CCcEEEecCCCCCCCceeecccccccccc
Q 042654 35 PSVFEDWSCYAHFVEYNILGNKIRP-LRF-----DTDSWCSSVVDMA----SRRIRYFRPCENGHYNWKQLKWLLSDARW 104 (270)
Q Consensus 35 v~~~~~~~~~a~a~~yDp~T~t~~p-l~v-----~td~FCsgg~~L~----~~~~r~ydP~~~~~~~W~~~~~~M~~~RW 104 (270)
..+.+..|. .-.+||+.+++... +.. ..-.|++.+..+. ...+++||.... .-. ..+.....
T Consensus 155 ~l~~~~~dg--~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~---~~~---~~~~~~~~ 226 (337)
T 1gxr_A 155 VCFSCCSDG--NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG---RQL---QQHDFTSQ 226 (337)
T ss_dssp EEEEEETTS--CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---EEE---EEEECSSC
T ss_pred EEEEEeCCC--cEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC---ceE---eeecCCCc
Confidence 344443333 35678988875432 221 1223455554444 677999987631 111 11222333
Q ss_pred ccceeecCCCCCcEEEEcCCCCceeEecc
Q 042654 105 YASNQILPAANDRVILVGGRGSFIYEFVP 133 (270)
Q Consensus 105 YpT~~tL~D~~GrVliiGG~~~~t~E~~p 133 (270)
..+...-+| |+.|++|+.+. ...+|+
T Consensus 227 v~~~~~s~~--~~~l~~~~~~~-~i~~~~ 252 (337)
T 1gxr_A 227 IFSLGYCPT--GEWLAVGMESS-NVEVLH 252 (337)
T ss_dssp EEEEEECTT--SSEEEEEETTS-CEEEEE
T ss_pred eEEEEECCC--CCEEEEEcCCC-cEEEEE
Confidence 445566689 99999998643 455565
No 24
>1lv4_A Catestatin, chromogranin A; glycoprotein, amidation, phosphorylation, signaling protein; NMR {Synthetic} SCOP: j.95.1.1
Probab=56.85 E-value=4.1 Score=24.11 Aligned_cols=15 Identities=33% Similarity=0.612 Sum_probs=12.5
Q ss_pred ccccccccCCCCCCC
Q 042654 8 HRCRSHAYGINSPQH 22 (270)
Q Consensus 8 ~~~~~~~~~~~~~~~ 22 (270)
-.-|+|+||..+|+.
T Consensus 5 lsFRar~Y~Fr~Pg~ 19 (26)
T 1lv4_A 5 LSFRARAYGFRGPGP 19 (26)
T ss_dssp SCSCCCSSSSCSSCT
T ss_pred EeeeeeecccCCCcc
Confidence 346999999999985
No 25
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=51.07 E-value=99 Score=26.37 Aligned_cols=81 Identities=6% Similarity=-0.002 Sum_probs=46.0
Q ss_pred eeEEEeCCCCceEecC-C----CCCcccCCCeecC-----CCcEEEecCCCCCCCceeeccccccccccccceeecCCCC
Q 042654 46 HFVEYNILGNKIRPLR-F----DTDSWCSSVVDMA-----SRRIRYFRPCENGHYNWKQLKWLLSDARWYASNQILPAAN 115 (270)
Q Consensus 46 ~a~~yDp~T~t~~pl~-v----~td~FCsgg~~L~-----~~~~r~ydP~~~~~~~W~~~~~~M~~~RWYpT~~tL~D~~ 115 (270)
.-.+||+.+++..... . ..-.|.+.+..+. ...+++||... ..... .+.....-.....-+|
T Consensus 55 ~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~---~~~~~---~~~~~~~~~~~~~s~d-- 126 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS---NTVAG---TVKTGKSPLGLALSPD-- 126 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEE---EEECSSSEEEEEECTT--
T ss_pred eEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCC---CeEEE---EEeCCCCcceEEECCC--
Confidence 4567999988764432 1 1223555555442 47899999863 22221 1223333345566689
Q ss_pred CcEEEEcCCCCceeEeccC
Q 042654 116 DRVILVGGRGSFIYEFVPK 134 (270)
Q Consensus 116 GrVliiGG~~~~t~E~~pp 134 (270)
|+.|++.+.....+.+|+.
T Consensus 127 g~~l~~~~~~~~~v~~~d~ 145 (391)
T 1l0q_A 127 GKKLYVTNNGDKTVSVINT 145 (391)
T ss_dssp SSEEEEEETTTTEEEEEET
T ss_pred CCEEEEEeCCCCEEEEEEC
Confidence 9977555554556777764
No 26
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=43.11 E-value=2e+02 Score=26.35 Aligned_cols=33 Identities=18% Similarity=0.460 Sum_probs=23.8
Q ss_pred CceeecCCCCCcccCc-eeecCCc--cEEEEcCccc
Q 042654 202 HVWKMEHMPEPRLLNN-MLILPTG--HILIINGAKR 234 (270)
Q Consensus 202 ~~W~~e~Mp~~R~m~~-~vlLPDG--~Vli~gGa~~ 234 (270)
.+|+....+.+..+.. .++|.++ .++|.||...
T Consensus 310 ~~W~~~~~~~~~~Ys~~l~~~~~~~~~l~~~~~~~~ 345 (367)
T 2ydt_A 310 SAWKKWDVPQPTAYTRSLLTFQKDPDLLMIMGAGIL 345 (367)
T ss_dssp TCCEEECCSSCCCTTCEEEEETTEEEEEEEEECCCS
T ss_pred CcceeccCCCCCCCCcceEecCCCCCEEEEecCccc
Confidence 4899887788888888 6667655 6666666553
No 27
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=39.05 E-value=1.4e+02 Score=25.27 Aligned_cols=46 Identities=13% Similarity=0.109 Sum_probs=27.1
Q ss_pred CCcEEEecCCCCCCCceeeccccccccccccceeecCCCCCcEEEEcCCCCceeE
Q 042654 76 SRRIRYFRPCENGHYNWKQLKWLLSDARWYASNQILPAANDRVILVGGRGSFIYE 130 (270)
Q Consensus 76 ~~~~r~ydP~~~~~~~W~~~~~~M~~~RWYpT~~tL~D~~GrVliiGG~~~~t~E 130 (270)
...+..||+. +.-.|+-. .+.+-.++..++| |++||++..+...++
T Consensus 145 ~~~v~~~d~~--G~~~w~~~-----~~~~~~~~~~~~~--g~~~v~~~~~~~v~~ 190 (276)
T 3no2_A 145 TSEVREIAPN--GQLLNSVK-----LSGTPFSSAFLDN--GDCLVACGDAHCFVQ 190 (276)
T ss_dssp TTEEEEECTT--SCEEEEEE-----CSSCCCEEEECTT--SCEEEECBTTSEEEE
T ss_pred CCEEEEECCC--CCEEEEEE-----CCCCccceeEcCC--CCEEEEeCCCCeEEE
Confidence 4567778775 35567521 1234445677788 888887765443333
No 28
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=35.08 E-value=2.6e+02 Score=25.36 Aligned_cols=31 Identities=26% Similarity=0.436 Sum_probs=20.6
Q ss_pred CceeecCCCCCcccCc-eeec-CCcc-EEEEcCc
Q 042654 202 HVWKMEHMPEPRLLNN-MLIL-PTGH-ILIINGA 232 (270)
Q Consensus 202 ~~W~~e~Mp~~R~m~~-~vlL-PDG~-Vli~gGa 232 (270)
..|+...-+.+-.+.+ .++| .||. +|++-|+
T Consensus 301 ~~W~~~~~~~~~~Ys~~l~~~~~~~~~~~~~~~~ 334 (355)
T 3a72_A 301 GEWTEIPCPEEHGYTRALRVLSEDGGRYLVVNSA 334 (355)
T ss_dssp SCBEEECCSSCCCTTCEEEECSHHHHCEEEEEEC
T ss_pred CCCeECCCCCCCCCChhheeeccCCceEEEEecc
Confidence 7898655566667777 6678 6676 6555554
No 29
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=29.64 E-value=2.4e+02 Score=23.26 Aligned_cols=86 Identities=6% Similarity=-0.118 Sum_probs=43.6
Q ss_pred eeeEEEeCCCCceEecCC------CCCcccCCCeecC----CCcEEEecCCCCCCCceeeccccccccccccc-eeecCC
Q 042654 45 AHFVEYNILGNKIRPLRF------DTDSWCSSVVDMA----SRRIRYFRPCENGHYNWKQLKWLLSDARWYAS-NQILPA 113 (270)
Q Consensus 45 a~a~~yDp~T~t~~pl~v------~td~FCsgg~~L~----~~~~r~ydP~~~~~~~W~~~~~~M~~~RWYpT-~~tL~D 113 (270)
..-.+||+.+++...... ..-.|.+.+..+- ...+.+||.... ...+.-... -..++.++. ...-+|
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~-~~~~~~~~~-~~~~~~~~~~~~~s~d 241 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADN-KILSRKKLL-DDGKEHFFINISLDTA 241 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT-EEEEEEECC-CSSSCCCEEEEEEETT
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC-eEEEEEEcC-CCCCCcccceEEECCC
Confidence 346679998887544321 1112333333222 456778887631 112221110 011233443 455688
Q ss_pred CCCcEEEEcCCCCceeEeccC
Q 042654 114 ANDRVILVGGRGSFIYEFVPK 134 (270)
Q Consensus 114 ~~GrVliiGG~~~~t~E~~pp 134 (270)
|+.|.++......+-+|+.
T Consensus 242 --g~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 242 --RQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp --TTEEEEEESSSSEEEEEET
T ss_pred --CCEEEEEeCCCCEEEEEEC
Confidence 9877777665556666664
No 30
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=26.48 E-value=1.5e+02 Score=25.12 Aligned_cols=89 Identities=3% Similarity=-0.094 Sum_probs=51.9
Q ss_pred ceEeecCCCeeeeEEEeCCCCceEecC-------CCCCcccCCCeecC----CCcEEEecCCCCCCCceeeccccccc--
Q 042654 35 PSVFEDWSCYAHFVEYNILGNKIRPLR-------FDTDSWCSSVVDMA----SRRIRYFRPCENGHYNWKQLKWLLSD-- 101 (270)
Q Consensus 35 v~~~~~~~~~a~a~~yDp~T~t~~pl~-------v~td~FCsgg~~L~----~~~~r~ydP~~~~~~~W~~~~~~M~~-- 101 (270)
..+.+..|. .-.+||+.+++...+. +..-.|.+.+.++. .+.+++||.... .+. ...+..
T Consensus 141 ~l~s~s~dg--~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~-~~~----~~~~~~~h 213 (343)
T 3lrv_A 141 YFIWADNRG--TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP-DQA----SSRFPVDE 213 (343)
T ss_dssp EEEEEETTC--CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT-TSC----CEECCCCT
T ss_pred EEEEEeCCC--cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-CCC----ccEEeccC
Confidence 344444443 3468999988764321 12224556666665 678999997632 111 011222
Q ss_pred cccccceeecCCCCCcEEEEcCCCCceeEeccC
Q 042654 102 ARWYASNQILPAANDRVILVGGRGSFIYEFVPK 134 (270)
Q Consensus 102 ~RWYpT~~tL~D~~GrVliiGG~~~~t~E~~pp 134 (270)
...--+...-+| |+.|+.|+. . ++.+|+-
T Consensus 214 ~~~v~~l~fs~~--g~~l~s~~~-~-~v~iwd~ 242 (343)
T 3lrv_A 214 EAKIKEVKFADN--GYWMVVECD-Q-TVVCFDL 242 (343)
T ss_dssp TSCEEEEEECTT--SSEEEEEES-S-BEEEEET
T ss_pred CCCEEEEEEeCC--CCEEEEEeC-C-eEEEEEc
Confidence 233445555689 999999994 4 8899974
No 31
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=21.92 E-value=2.8e+02 Score=23.83 Aligned_cols=94 Identities=6% Similarity=-0.039 Sum_probs=50.6
Q ss_pred CCceEeecCCCeeeeEEEeCCCCceEecC--------CCCCcccCCCeecC-------CCcEEEecCCCCCCCceeeccc
Q 042654 33 NKPSVFEDWSCYAHFVEYNILGNKIRPLR--------FDTDSWCSSVVDMA-------SRRIRYFRPCENGHYNWKQLKW 97 (270)
Q Consensus 33 gkv~~~~~~~~~a~a~~yDp~T~t~~pl~--------v~td~FCsgg~~L~-------~~~~r~ydP~~~~~~~W~~~~~ 97 (270)
|+..+.+..|. .-.+||+.+++..... +..-.|++.+.++. ...+++||.... ...... .
T Consensus 188 ~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~-~~~~~~--~ 262 (402)
T 2aq5_A 188 GALICTSCRDK--RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHL-EEPLSL--Q 262 (402)
T ss_dssp SSCEEEEETTS--EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBC-SSCSEE--E
T ss_pred CCEEEEEecCC--cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccc-cCCceE--E
Confidence 34455554443 4568999887643321 12234666666554 456888887531 110100 0
Q ss_pred cccccccccceeecCCCCCcEEEEcCCCCceeEecc
Q 042654 98 LLSDARWYASNQILPAANDRVILVGGRGSFIYEFVP 133 (270)
Q Consensus 98 ~M~~~RWYpT~~tL~D~~GrVliiGG~~~~t~E~~p 133 (270)
.+......-....-+| |+.|++.|.....+.+|+
T Consensus 263 ~~~~~~~v~~~~~s~~--~~~l~~~g~~dg~i~i~d 296 (402)
T 2aq5_A 263 ELDTSSGVLLPFFDPD--TNIVYLCGKGDSSIRYFE 296 (402)
T ss_dssp ECCCCSSCEEEEEETT--TTEEEEEETTCSCEEEEE
T ss_pred eccCCCceeEEEEcCC--CCEEEEEEcCCCeEEEEE
Confidence 1223334445556689 999977665445666664
No 32
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=21.46 E-value=6.4e+02 Score=25.47 Aligned_cols=168 Identities=7% Similarity=-0.056 Sum_probs=0.0
Q ss_pred CCceEeecCCCeeeeEEEeCCCCceEecC-----CCCCcccCCCeecC---CCcEEEecCCCCCCCceeecccccccccc
Q 042654 33 NKPSVFEDWSCYAHFVEYNILGNKIRPLR-----FDTDSWCSSVVDMA---SRRIRYFRPCENGHYNWKQLKWLLSDARW 104 (270)
Q Consensus 33 gkv~~~~~~~~~a~a~~yDp~T~t~~pl~-----v~td~FCsgg~~L~---~~~~r~ydP~~~~~~~W~~~~~~M~~~RW 104 (270)
|+..+.+..|.. -.+||..+++...+. +..-.|++.+.++. ...+++||.. +..-...-. .....
T Consensus 1015 g~~l~s~~~dg~--i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~---~~~~~~~~~--~~~~~ 1087 (1249)
T 3sfz_A 1015 GKTLISSSEDSV--IQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVI---TGRIERDFT--CHQGT 1087 (1249)
T ss_dssp SSCEEEECSSSB--EEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETT---TTCCCEEEE--CCSSC
T ss_pred CCEEEEEcCCCE--EEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECC---CCceeEEEc--ccCCc
Q ss_pred ccceeecCCCCCcEEEEcCCCCceeEeccCCCCCCCCCCCCCCCceecccCCcCCCCceeEEEEEcCCCCCchhhhcccc
Q 042654 105 YASNQILPAANDRVILVGGRGSFIYEFVPKLSSSSSDKNCPSSGSSVLLCLDHSNNFRKVKVMVCGGAAAGAYRVAAQGR 184 (270)
Q Consensus 105 YpT~~tL~D~~GrVliiGG~~~~t~E~~ppL~~T~d~R~yp~sg~svmLPl~~~~~y~~~~VLv~GG~~~~~~~~~~~~~ 184 (270)
--+...-+| |+.|++|+. ..++.+|+--....-.......+.-.-+-..+ +++.|++|+
T Consensus 1088 v~~~~~s~d--~~~l~s~s~-d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~-----dg~~lat~~------------- 1146 (1249)
T 3sfz_A 1088 VLSCAISSD--ATKFSSTSA-DKTAKIWSFDLLSPLHELKGHNGCVRCSAFSL-----DGILLATGD------------- 1146 (1249)
T ss_dssp CCCEEECSS--SSSCEEECC-SSCCCEECSSSSSCSBCCCCCSSCEEEEEECS-----SSSEEEEEE-------------
T ss_pred EEEEEECCC--CCEEEEEcC-CCcEEEEECCCcceeeeeccCCCcEEEEEECC-----CCCEEEEEe-------------
Q ss_pred cccCCCceeEEEecCCCCceeecCCCCCcc-------cCceeecCCccEEEEcC
Q 042654 185 FLKGLSSCGTMVLTRNKHVWKMEHMPEPRL-------LNNMLILPTGHILIING 231 (270)
Q Consensus 185 ~~pAs~~~~~I~l~~~~~~W~~e~Mp~~R~-------m~~~vlLPDG~Vli~gG 231 (270)
........++...........+...+. -....+-|||+.|+++|
T Consensus 1147 ---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~ 1197 (1249)
T 3sfz_A 1147 ---DNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG 1197 (1249)
T ss_dssp ---TTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES
T ss_pred ---CCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC
No 33
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=21.33 E-value=3.7e+02 Score=22.64 Aligned_cols=91 Identities=7% Similarity=0.046 Sum_probs=0.0
Q ss_pred CCceEeecCCCeeeeEEEeCCCCceEecCCCCC------cccCCCeecC----CCcEEEecCCCCCCCceeecccccccc
Q 042654 33 NKPSVFEDWSCYAHFVEYNILGNKIRPLRFDTD------SWCSSVVDMA----SRRIRYFRPCENGHYNWKQLKWLLSDA 102 (270)
Q Consensus 33 gkv~~~~~~~~~a~a~~yDp~T~t~~pl~v~td------~FCsgg~~L~----~~~~r~ydP~~~~~~~W~~~~~~M~~~ 102 (270)
|+..+.+..|.. -.+||..+.+.......+. .|++.+..|. .+.+++||-. +......-....
T Consensus 218 ~~~l~s~s~dg~--i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~-----~~~~~~~~~~h~ 290 (321)
T 3ow8_A 218 SQLLVTASDDGY--IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG-----TRTCVHTFFDHQ 290 (321)
T ss_dssp SCEEEEECTTSC--EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----TTEEEEEECCCS
T ss_pred CCEEEEEcCCCe--EEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC-----CCEEEEEEcCCC
Q ss_pred ccccceeecCCCCCcEEEEcCCCCceeEecc
Q 042654 103 RWYASNQILPAANDRVILVGGRGSFIYEFVP 133 (270)
Q Consensus 103 RWYpT~~tL~D~~GrVliiGG~~~~t~E~~p 133 (270)
..--+....+| |+.|+.||. ..++.+|+
T Consensus 291 ~~v~~v~~s~~--g~~l~s~~~-d~~i~vwd 318 (321)
T 3ow8_A 291 DQVWGVKYNGN--GSKIVSVGD-DQEIHIYD 318 (321)
T ss_dssp SCEEEEEECTT--SSEEEEEET-TCCEEEEE
T ss_pred CcEEEEEECCC--CCEEEEEeC-CCeEEEEe
Done!