Query 042656
Match_columns 289
No_of_seqs 149 out of 639
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 08:19:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042656.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042656hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1088 RfbB dTDP-D-glucose 4, 99.9 1.9E-24 4.2E-29 197.2 17.1 228 3-286 82-320 (340)
2 PRK15181 Vi polysaccharide bio 99.9 2.6E-21 5.7E-26 182.8 18.1 228 6-286 101-341 (348)
3 COG1087 GalE UDP-glucose 4-epi 99.8 3.1E-20 6.6E-25 170.3 15.8 229 4-284 76-323 (329)
4 PRK10217 dTDP-glucose 4,6-dehy 99.8 6E-19 1.3E-23 166.1 19.8 232 7-285 86-334 (355)
5 PLN02427 UDP-apiose/xylose syn 99.8 3.1E-18 6.7E-23 163.7 19.0 230 10-284 101-370 (386)
6 KOG0747 Putative NAD+-dependen 99.8 1.6E-18 3.4E-23 157.7 15.8 227 4-285 89-325 (331)
7 PRK11908 NAD-dependent epimera 99.8 4.9E-18 1.1E-22 159.9 19.0 234 9-285 82-338 (347)
8 PLN02725 GDP-4-keto-6-deoxyman 99.8 8.1E-18 1.7E-22 154.4 19.5 222 10-285 65-300 (306)
9 PLN00016 RNA-binding protein; 99.8 6.7E-18 1.5E-22 161.3 19.7 211 23-288 142-356 (378)
10 PRK08125 bifunctional UDP-gluc 99.8 5.6E-18 1.2E-22 173.1 18.9 237 7-286 394-653 (660)
11 PLN02166 dTDP-glucose 4,6-dehy 99.8 9.2E-18 2E-22 164.0 17.9 218 8-285 197-426 (436)
12 PLN02206 UDP-glucuronate decar 99.8 1.3E-17 2.9E-22 163.1 18.0 216 10-285 198-425 (442)
13 PLN02653 GDP-mannose 4,6-dehyd 99.8 6E-17 1.3E-21 151.9 18.9 221 7-284 95-330 (340)
14 PLN02572 UDP-sulfoquinovose sy 99.8 2.5E-17 5.4E-22 161.2 16.8 222 7-285 148-416 (442)
15 PRK10084 dTDP-glucose 4,6 dehy 99.7 1.1E-16 2.3E-21 150.6 19.9 227 8-285 86-337 (352)
16 KOG1430 C-3 sterol dehydrogena 99.7 7.8E-17 1.7E-21 152.8 18.7 243 7-285 86-348 (361)
17 PRK11150 rfaD ADP-L-glycero-D- 99.7 6.5E-17 1.4E-21 149.4 17.6 211 14-283 85-307 (308)
18 TIGR01214 rmlD dTDP-4-dehydror 99.7 8.3E-17 1.8E-21 146.8 18.1 214 11-280 66-285 (287)
19 PLN02260 probable rhamnose bio 99.7 5.7E-17 1.2E-21 165.7 18.9 222 7-286 92-323 (668)
20 TIGR01472 gmd GDP-mannose 4,6- 99.7 1.1E-16 2.3E-21 150.6 18.7 239 6-284 89-341 (343)
21 PLN02989 cinnamyl-alcohol dehy 99.7 1E-16 2.2E-21 149.1 18.2 220 9-288 91-325 (325)
22 PRK09987 dTDP-4-dehydrorhamnos 99.7 1.3E-16 2.8E-21 147.9 17.9 224 5-283 64-294 (299)
23 TIGR03466 HpnA hopanoid-associ 99.7 2.6E-16 5.7E-21 145.3 19.6 241 11-288 78-328 (328)
24 PRK10675 UDP-galactose-4-epime 99.7 2.1E-16 4.6E-21 147.5 18.8 221 11-284 89-331 (338)
25 PLN02214 cinnamoyl-CoA reducta 99.7 1.8E-16 4E-21 149.6 18.4 216 13-289 94-323 (342)
26 PLN02240 UDP-glucose 4-epimera 99.7 2.5E-16 5.5E-21 147.7 19.2 222 10-286 96-342 (352)
27 PLN02695 GDP-D-mannose-3',5'-e 99.7 2.5E-16 5.5E-21 150.4 18.3 215 13-284 104-331 (370)
28 KOG1429 dTDP-glucose 4-6-dehyd 99.7 3E-16 6.6E-21 142.9 17.0 220 4-284 100-332 (350)
29 TIGR01181 dTDP_gluc_dehyt dTDP 99.7 6.7E-16 1.4E-20 141.6 18.5 216 9-286 87-314 (317)
30 TIGR02622 CDP_4_6_dhtase CDP-g 99.7 9E-16 1.9E-20 144.7 19.6 221 7-284 87-330 (349)
31 TIGR02197 heptose_epim ADP-L-g 99.7 2.3E-15 4.9E-20 138.6 18.0 217 11-283 80-313 (314)
32 TIGR01179 galE UDP-glucose-4-e 99.7 4.9E-15 1.1E-19 136.2 19.6 220 9-284 84-327 (328)
33 PLN02662 cinnamyl-alcohol dehy 99.7 5.6E-15 1.2E-19 136.8 18.5 216 11-288 90-321 (322)
34 PLN02986 cinnamyl-alcohol dehy 99.7 7.2E-15 1.6E-19 136.7 18.7 216 11-288 91-322 (322)
35 PF01073 3Beta_HSD: 3-beta hyd 99.6 2.9E-15 6.3E-20 138.4 14.9 167 14-200 84-274 (280)
36 COG0451 WcaG Nucleoside-diphos 99.6 1.9E-14 4.1E-19 132.0 18.4 216 14-286 84-312 (314)
37 PLN02650 dihydroflavonol-4-red 99.6 4.4E-14 9.5E-19 133.2 19.9 215 13-289 93-326 (351)
38 TIGR01777 yfcH conserved hypot 99.6 1.7E-14 3.8E-19 131.1 16.1 204 14-274 78-291 (292)
39 PLN00198 anthocyanidin reducta 99.6 5.1E-14 1.1E-18 132.0 18.5 221 12-288 95-336 (338)
40 PLN02896 cinnamyl-alcohol dehy 99.5 3E-13 6.6E-18 127.7 18.4 226 12-289 98-346 (353)
41 PRK07201 short chain dehydroge 99.5 1.7E-12 3.6E-17 131.9 20.3 237 15-280 94-349 (657)
42 KOG1371 UDP-glucose 4-epimeras 99.5 3.8E-13 8.2E-18 124.9 12.5 223 4-285 86-335 (343)
43 PF01370 Epimerase: NAD depend 99.5 1.1E-13 2.4E-18 121.8 8.0 148 10-176 80-236 (236)
44 PF04321 RmlD_sub_bind: RmlD s 99.4 4.7E-13 1E-17 123.8 8.1 216 6-282 62-285 (286)
45 PRK05865 hypothetical protein; 99.4 7.1E-12 1.5E-16 130.8 16.1 184 18-285 75-259 (854)
46 COG1091 RfbD dTDP-4-dehydrorha 99.3 6.1E-11 1.3E-15 109.3 17.8 215 6-281 61-279 (281)
47 CHL00194 ycf39 Ycf39; Provisio 99.3 2.5E-11 5.5E-16 113.2 15.4 217 14-280 78-297 (317)
48 KOG1431 GDP-L-fucose synthetas 99.3 6.6E-11 1.4E-15 105.3 13.4 218 12-284 73-308 (315)
49 PLN02686 cinnamoyl-CoA reducta 99.3 7.6E-11 1.6E-15 112.6 14.5 159 17-199 150-328 (367)
50 TIGR01746 Thioester-redct thio 99.3 1.1E-09 2.4E-14 102.0 21.6 237 19-288 109-367 (367)
51 TIGR03589 PseB UDP-N-acetylglu 99.2 1.7E-10 3.7E-15 108.2 13.0 188 8-278 87-286 (324)
52 PLN02778 3,5-epimerase/4-reduc 99.2 1.2E-09 2.6E-14 101.5 17.6 215 9-286 74-295 (298)
53 PLN02996 fatty acyl-CoA reduct 99.2 2.3E-10 5E-15 113.6 11.7 173 13-199 127-362 (491)
54 COG1089 Gmd GDP-D-mannose dehy 99.1 1.9E-09 4.2E-14 98.8 15.0 237 4-281 87-337 (345)
55 PLN02583 cinnamoyl-CoA reducta 99.1 2.2E-09 4.7E-14 99.4 13.0 155 15-196 96-265 (297)
56 PLN02260 probable rhamnose bio 99.0 1.2E-08 2.7E-13 104.5 15.7 208 8-280 444-659 (668)
57 KOG1502 Flavonol reductase/cin 98.9 1.1E-07 2.5E-12 89.3 17.2 211 17-289 99-327 (327)
58 PLN02657 3,8-divinyl protochlo 98.8 5.9E-08 1.3E-12 93.7 11.5 147 18-200 154-302 (390)
59 TIGR03443 alpha_am_amid L-amin 98.7 1.3E-06 2.8E-11 96.2 20.7 245 14-289 1076-1356(1389)
60 COG1090 Predicted nucleoside-d 98.6 2.5E-06 5.4E-11 78.3 16.4 202 22-280 85-295 (297)
61 PLN02503 fatty acyl-CoA reduct 98.6 4.2E-07 9.1E-12 92.4 11.5 165 13-197 234-475 (605)
62 TIGR03649 ergot_EASG ergot alk 98.3 7.8E-06 1.7E-10 74.7 12.8 145 25-213 84-228 (285)
63 KOG1372 GDP-mannose 4,6 dehydr 98.2 2.8E-05 6E-10 70.6 13.4 229 4-280 115-364 (376)
64 PRK12320 hypothetical protein; 98.2 3.1E-05 6.8E-10 80.0 14.3 125 20-193 77-202 (699)
65 PLN00141 Tic62-NAD(P)-related 97.7 0.00037 8.1E-09 62.6 10.5 144 14-192 100-250 (251)
66 PF07993 NAD_binding_4: Male s 97.6 4.5E-05 9.7E-10 68.8 2.8 128 17-159 106-249 (249)
67 COG1086 Predicted nucleoside-d 97.5 0.002 4.3E-08 64.7 13.4 153 4-195 334-496 (588)
68 KOG3019 Predicted nucleoside-d 97.5 0.0017 3.6E-08 58.6 11.4 137 31-201 123-265 (315)
69 PF02719 Polysacc_synt_2: Poly 97.3 0.00052 1.1E-08 64.0 6.5 153 6-198 88-251 (293)
70 PRK09135 pteridine reductase; 97.0 0.0044 9.5E-08 54.6 9.1 129 13-182 107-248 (249)
71 PF13950 Epimerase_Csub: UDP-g 96.9 0.00093 2E-08 48.1 3.5 38 248-285 20-58 (62)
72 COG3320 Putative dehydrogenase 96.9 0.0031 6.6E-08 60.6 7.4 168 16-192 105-289 (382)
73 KOG2865 NADH:ubiquinone oxidor 96.8 0.0054 1.2E-07 57.1 8.0 144 21-196 152-295 (391)
74 PF05368 NmrA: NmrA-like famil 96.5 0.0024 5.3E-08 56.5 3.5 142 26-198 82-229 (233)
75 KOG1221 Acyl-CoA reductase [Li 96.3 0.0081 1.8E-07 59.4 6.3 171 12-195 120-332 (467)
76 PF13460 NAD_binding_10: NADH( 96.3 0.0067 1.5E-07 51.3 5.1 103 23-164 75-182 (183)
77 PRK06482 short chain dehydroge 95.9 0.056 1.2E-06 48.8 9.5 144 14-195 99-263 (276)
78 PRK12825 fabG 3-ketoacyl-(acyl 95.4 0.083 1.8E-06 46.1 8.4 127 14-181 107-248 (249)
79 KOG2774 NAD dependent epimeras 95.0 0.85 1.8E-05 41.7 13.5 150 17-194 131-299 (366)
80 PRK05875 short chain dehydroge 94.5 0.39 8.4E-06 43.2 10.4 147 13-198 109-274 (276)
81 PRK08263 short chain dehydroge 94.3 0.12 2.6E-06 46.8 6.4 153 11-195 97-263 (275)
82 PRK13394 3-hydroxybutyrate deh 94.1 0.17 3.6E-06 45.0 6.9 75 84-179 177-259 (262)
83 PRK07806 short chain dehydroge 93.5 0.25 5.3E-06 43.6 6.9 133 13-181 100-245 (248)
84 PRK12429 3-hydroxybutyrate deh 93.3 0.18 3.9E-06 44.6 5.7 76 83-179 172-255 (258)
85 PRK05653 fabG 3-ketoacyl-(acyl 93.3 0.33 7.2E-06 42.3 7.3 125 15-180 106-245 (246)
86 PLN03209 translocon at the inn 93.1 0.72 1.6E-05 47.1 10.2 139 15-191 177-324 (576)
87 TIGR01963 PHB_DH 3-hydroxybuty 92.8 0.13 2.9E-06 45.3 4.2 36 145-180 216-253 (255)
88 PRK07074 short chain dehydroge 92.7 0.18 4E-06 44.8 5.0 46 146-191 206-253 (257)
89 PRK12826 3-ketoacyl-(acyl-carr 92.4 0.77 1.7E-05 40.2 8.5 130 11-179 103-247 (251)
90 PRK09134 short chain dehydroge 92.3 0.63 1.4E-05 41.5 7.8 35 150-184 215-249 (258)
91 PRK07067 sorbitol dehydrogenas 92.0 0.39 8.4E-06 42.7 6.1 138 11-182 100-257 (257)
92 COG0702 Predicted nucleoside-d 91.7 3 6.4E-05 37.0 11.6 102 74-200 123-224 (275)
93 KOG4288 Predicted oxidoreducta 91.7 1.4 3.1E-05 40.1 9.1 117 23-170 139-267 (283)
94 PRK06077 fabG 3-ketoacyl-(acyl 90.1 0.61 1.3E-05 41.0 5.4 33 148-180 214-246 (252)
95 PRK12829 short chain dehydroge 89.9 0.35 7.7E-06 42.9 3.8 81 84-180 180-262 (264)
96 PRK12828 short chain dehydroge 88.6 2 4.4E-05 37.1 7.6 115 16-180 107-237 (239)
97 PRK07774 short chain dehydroge 88.5 3 6.5E-05 36.6 8.7 129 11-182 106-249 (250)
98 PRK06914 short chain dehydroge 88.3 2.3 4.9E-05 38.3 7.9 35 149-184 226-260 (280)
99 PRK12827 short chain dehydroge 86.8 4.7 0.0001 35.1 8.9 124 13-179 109-248 (249)
100 PRK07775 short chain dehydroge 85.3 2.4 5.2E-05 38.3 6.4 29 147-176 221-249 (274)
101 TIGR01830 3oxo_ACP_reduc 3-oxo 85.0 3 6.5E-05 36.1 6.6 125 11-178 96-237 (239)
102 PRK12935 acetoacetyl-CoA reduc 82.7 9.1 0.0002 33.5 8.8 126 13-179 106-245 (247)
103 PRK08063 enoyl-(acyl carrier p 82.1 6 0.00013 34.6 7.4 124 18-180 109-247 (250)
104 PRK06196 oxidoreductase; Provi 81.8 28 0.00061 32.0 12.1 80 16-101 122-218 (315)
105 TIGR03206 benzo_BadH 2-hydroxy 80.7 20 0.00044 31.2 10.3 127 16-179 105-248 (250)
106 PRK08324 short chain dehydroge 80.5 3.9 8.4E-05 42.5 6.4 78 84-180 591-676 (681)
107 PRK06123 short chain dehydroge 80.3 6.8 0.00015 34.3 7.1 70 84-179 177-248 (248)
108 PRK09186 flagellin modificatio 79.9 8.7 0.00019 33.7 7.7 129 16-179 111-254 (256)
109 PRK07523 gluconate 5-dehydroge 78.8 15 0.00033 32.3 8.9 127 17-182 113-254 (255)
110 PRK09730 putative NAD(P)-bindi 77.3 9.1 0.0002 33.3 7.0 67 84-178 176-246 (247)
111 PRK07060 short chain dehydroge 74.3 8.1 0.00018 33.6 5.8 70 84-179 170-242 (245)
112 PRK06128 oxidoreductase; Provi 72.1 26 0.00057 32.0 8.9 129 11-181 155-299 (300)
113 PRK06523 short chain dehydroge 72.0 34 0.00073 30.1 9.4 32 151-182 226-259 (260)
114 PRK06500 short chain dehydroge 71.8 26 0.00055 30.5 8.5 130 10-178 99-245 (249)
115 PRK08217 fabG 3-ketoacyl-(acyl 71.1 20 0.00043 31.2 7.6 69 84-179 183-251 (253)
116 PRK12823 benD 1,6-dihydroxycyc 69.9 23 0.0005 31.2 7.8 29 151-179 228-258 (260)
117 PRK12746 short chain dehydroge 69.2 11 0.00023 33.2 5.4 70 84-178 180-251 (254)
118 PRK05557 fabG 3-ketoacyl-(acyl 68.2 18 0.00039 31.2 6.6 30 150-179 214-245 (248)
119 PRK06138 short chain dehydroge 67.7 37 0.00081 29.5 8.6 31 149-179 217-249 (252)
120 PRK12745 3-ketoacyl-(acyl-carr 67.4 23 0.00049 31.0 7.2 72 84-181 180-253 (256)
121 PRK12384 sorbitol-6-phosphate 65.7 16 0.00035 32.2 5.9 36 145-180 220-257 (259)
122 PRK07890 short chain dehydroge 65.4 12 0.00026 32.9 4.9 138 11-179 103-255 (258)
123 PRK12936 3-ketoacyl-(acyl-carr 63.3 24 0.00052 30.5 6.5 30 150-179 211-242 (245)
124 PRK07231 fabG 3-ketoacyl-(acyl 58.7 97 0.0021 26.8 9.5 31 149-179 216-248 (251)
125 PRK08220 2,3-dihydroxybenzoate 58.4 32 0.0007 30.0 6.5 135 11-179 96-248 (252)
126 KOG1203 Predicted dehydrogenas 58.2 56 0.0012 32.2 8.4 142 20-197 175-324 (411)
127 PRK07041 short chain dehydroge 56.5 73 0.0016 27.3 8.3 30 151-180 199-228 (230)
128 PRK12939 short chain dehydroge 53.8 53 0.0012 28.4 7.0 32 149-180 215-248 (250)
129 PRK06180 short chain dehydroge 53.6 45 0.00097 29.9 6.7 70 17-100 104-186 (277)
130 PRK06701 short chain dehydroge 52.7 1E+02 0.0022 28.0 9.0 122 16-180 150-287 (290)
131 PRK05876 short chain dehydroge 52.6 44 0.00095 30.2 6.5 143 17-195 109-266 (275)
132 PRK08213 gluconate 5-dehydroge 52.4 1.4E+02 0.0031 26.0 9.7 126 16-179 114-256 (259)
133 PRK10538 malonic semialdehyde 51.4 95 0.0021 27.1 8.3 76 12-101 96-184 (248)
134 PRK12824 acetoacetyl-CoA reduc 49.7 1E+02 0.0023 26.4 8.2 128 12-180 101-243 (245)
135 PRK12938 acetyacetyl-CoA reduc 48.3 1.6E+02 0.0034 25.5 9.2 126 12-178 102-242 (246)
136 PRK06841 short chain dehydroge 45.8 1E+02 0.0022 26.9 7.6 124 16-179 114-252 (255)
137 COG2910 Putative NADH-flavin r 45.1 1.3E+02 0.0029 26.7 7.8 80 70-176 124-210 (211)
138 PRK06181 short chain dehydroge 43.0 1.1E+02 0.0024 26.8 7.5 67 84-178 170-236 (263)
139 PLN02253 xanthoxin dehydrogena 42.9 1.2E+02 0.0025 27.0 7.7 32 150-181 238-271 (280)
140 PRK06179 short chain dehydroge 41.4 62 0.0013 28.6 5.5 77 11-101 93-182 (270)
141 PRK06550 fabG 3-ketoacyl-(acyl 40.9 2E+02 0.0043 24.6 8.6 127 12-178 89-231 (235)
142 PRK12937 short chain dehydroge 40.0 1.3E+02 0.0028 25.9 7.3 28 151-178 214-243 (245)
143 PRK07453 protochlorophyllide o 38.2 80 0.0017 29.0 5.9 24 11-34 104-127 (322)
144 PRK12748 3-ketoacyl-(acyl-carr 36.5 2.4E+02 0.0052 24.6 8.6 124 11-178 115-253 (256)
145 PRK12742 oxidoreductase; Provi 34.8 2.9E+02 0.0063 23.5 8.9 126 12-178 96-234 (237)
146 PRK05565 fabG 3-ketoacyl-(acyl 33.0 2E+02 0.0044 24.6 7.4 69 83-179 174-245 (247)
147 PRK08642 fabG 3-ketoacyl-(acyl 32.9 2.4E+02 0.0053 24.2 7.9 125 15-179 111-250 (253)
148 PRK08017 oxidoreductase; Provi 32.6 1.6E+02 0.0034 25.6 6.6 22 146-167 203-224 (256)
149 PRK08219 short chain dehydroge 32.2 1.3E+02 0.0029 25.4 6.0 29 148-177 194-222 (227)
150 PRK05786 fabG 3-ketoacyl-(acyl 31.6 1.9E+02 0.0041 24.7 6.9 63 83-178 169-234 (238)
151 PF13812 PPR_3: Pentatricopept 31.2 57 0.0012 18.8 2.5 17 273-289 18-34 (34)
152 PF11248 DUF3046: Protein of u 30.9 41 0.00088 24.3 2.0 44 151-198 18-61 (63)
153 PRK12743 oxidoreductase; Provi 30.4 2.8E+02 0.0061 24.2 8.0 127 12-179 101-243 (256)
154 PRK06113 7-alpha-hydroxysteroi 29.3 3.8E+02 0.0083 23.3 9.1 32 150-181 219-252 (255)
155 PRK07985 oxidoreductase; Provi 28.9 3.8E+02 0.0082 24.3 8.7 127 11-179 149-291 (294)
156 PRK07666 fabG 3-ketoacyl-(acyl 28.1 2.5E+02 0.0054 24.1 7.1 17 84-100 176-192 (239)
157 PRK06124 gluconate 5-dehydroge 26.0 1.7E+02 0.0037 25.4 5.8 132 14-179 111-252 (256)
158 PF07582 AP_endonuc_2_N: AP en 25.5 1E+02 0.0022 21.5 3.2 17 269-285 27-43 (55)
159 PRK07577 short chain dehydroge 25.4 1.8E+02 0.0038 24.9 5.6 30 150-179 201-232 (234)
160 PRK08628 short chain dehydroge 25.0 3.1E+02 0.0067 23.8 7.2 30 149-178 218-249 (258)
161 PRK06947 glucose-1-dehydrogena 23.9 4E+02 0.0086 22.9 7.7 28 151-178 218-247 (248)
162 PRK12744 short chain dehydroge 21.8 2E+02 0.0043 25.2 5.3 32 149-180 223-255 (257)
163 TIGR01829 AcAcCoA_reduct aceto 21.8 3.1E+02 0.0067 23.3 6.5 69 84-179 170-240 (242)
164 PRK06197 short chain dehydroge 21.5 6E+02 0.013 22.9 12.2 86 13-101 115-217 (306)
165 PRK06194 hypothetical protein; 21.2 5.8E+02 0.013 22.5 8.5 23 11-33 103-125 (287)
166 PF06755 DUF1219: Protein of u 20.7 4.1E+02 0.0088 21.4 6.1 76 181-266 16-104 (114)
167 PF00325 Crp: Bacterial regula 20.7 1E+02 0.0022 19.1 2.2 19 270-288 14-32 (32)
No 1
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.92 E-value=1.9e-24 Score=197.25 Aligned_cols=228 Identities=16% Similarity=0.176 Sum_probs=180.3
Q ss_pred cccccCcccccCCchhhccChHHHHHhhhhHhhhcc-Cceeeccc-ccccCccCCCCCCCCCCCCCCC-CCCChHHHHHH
Q 042656 3 RCEIHYTGPISDPSLTVGASSRSLHNSLLPLAVHTN-ICKYQGLP-FRYFGQLIGHDPPFKEDSVRLP-FPNFYYAVEDI 79 (289)
Q Consensus 3 ~~~~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG-~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p-~p~fyy~qEd~ 79 (289)
.||.||.+|+.+|..++.+|+.||.+.|+. ++.-. ..+|..+| .++||++......|+|++|..| +| |.+.|+
T Consensus 82 AAESHVDRSI~~P~~Fi~TNv~GT~~LLEa-ar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSP---YSASKA 157 (340)
T COG1088 82 AAESHVDRSIDGPAPFIQTNVVGTYTLLEA-ARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSP---YSASKA 157 (340)
T ss_pred chhccccccccChhhhhhcchHHHHHHHHH-HHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCC---cchhhh
Confidence 489999999999999999999999999999 55444 35898888 8999986333346999999986 55 888776
Q ss_pred HHh-------cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccch
Q 042656 80 AAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDS 152 (289)
Q Consensus 80 L~e-------~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~ 152 (289)
-++ +..|++.+|+|+++.|||-. +-.-.+++.+.-+| .|.|+|. .|++. |+||+.++
T Consensus 158 asD~lVray~~TYglp~~ItrcSNNYGPyq--fpEKlIP~~I~nal---~g~~lpv--------YGdG~---~iRDWl~V 221 (340)
T COG1088 158 ASDLLVRAYVRTYGLPATITRCSNNYGPYQ--FPEKLIPLMIINAL---LGKPLPV--------YGDGL---QIRDWLYV 221 (340)
T ss_pred hHHHHHHHHHHHcCCceEEecCCCCcCCCc--CchhhhHHHHHHHH---cCCCCce--------ecCCc---ceeeeEEe
Confidence 665 56799999999999999963 33444555555555 8999999 99987 99999999
Q ss_pred HHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcc
Q 042656 153 RVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKT 232 (289)
Q Consensus 153 ~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~ 232 (289)
++.|+++-..++.. ..||+|||..|...+-.++...|++.+|...... -.+.+++.
T Consensus 222 eDh~~ai~~Vl~kg-~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~-----~~li~~V~------------------ 277 (340)
T COG1088 222 EDHCRAIDLVLTKG-KIGETYNIGGGNERTNLEVVKTICELLGKDKPDY-----RDLITFVE------------------ 277 (340)
T ss_pred HhHHHHHHHHHhcC-cCCceEEeCCCccchHHHHHHHHHHHhCccccch-----hhheEecc------------------
Confidence 99999966555544 4599999999999999999999999999865421 01112222
Q ss_pred ccccccchhhhhhhhcccccccccHHHHHh-cCCCCCcChHHHHHHHHHHHHHCC
Q 042656 233 KMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFVDTMKSIRTWVKKLREMK 286 (289)
Q Consensus 233 ~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~-~Gw~~~~dt~e~~~~~~~~lr~~~ 286 (289)
++ -|.+..--+|.+|+++ +||.|.++.++|+++|++||.+.+
T Consensus 278 --DR----------pGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~ 320 (340)
T COG1088 278 --DR----------PGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNE 320 (340)
T ss_pred --CC----------CCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhch
Confidence 11 1345567888999555 799999999999999999998754
No 2
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.87 E-value=2.6e-21 Score=182.77 Aligned_cols=228 Identities=15% Similarity=0.145 Sum_probs=165.5
Q ss_pred ccCcccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh--
Q 042656 6 IHYTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS-- 82 (289)
Q Consensus 6 ~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e-- 82 (289)
.+++.+..+|...+.+|+.++.+.|+. +.++|+|++..+| ...||. ....|..|+++.. |...|...|...|
T Consensus 101 ~~~~~~~~~~~~~~~~Nv~gt~nll~~-~~~~~~~~~v~~SS~~vyg~--~~~~~~~e~~~~~--p~~~Y~~sK~~~e~~ 175 (348)
T PRK15181 101 GSVPRSLKDPIATNSANIDGFLNMLTA-ARDAHVSSFTYAASSSTYGD--HPDLPKIEERIGR--PLSPYAVTKYVNELY 175 (348)
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHH-HHHcCCCeEEEeechHhhCC--CCCCCCCCCCCCC--CCChhhHHHHHHHHH
Confidence 346778899999999999999999998 6788999998866 567885 3356788887654 4445776555555
Q ss_pred -----cCCCceEEEeccCceeecCCC-c-hhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHH
Q 042656 83 -----YSPAVTYSVHRSSIIIGASSR-S-LNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVL 155 (289)
Q Consensus 83 -----~~~g~~~~ivRP~~V~G~~~g-n-~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~l 155 (289)
+..++.++++||+.||||... + .+..+.+..+..++ .|.++.. .|++. +.+|+++++++
T Consensus 176 ~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~---~~~~i~~--------~g~g~---~~rd~i~v~D~ 241 (348)
T PRK15181 176 ADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLL---KDEPIYI--------NGDGS---TSRDFCYIENV 241 (348)
T ss_pred HHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHH---cCCCcEE--------eCCCC---ceEeeEEHHHH
Confidence 346899999999999999742 2 12222222233333 5778887 67664 88999999999
Q ss_pred HHHHHHHhcCCC--cCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccc
Q 042656 156 AEQQIWAATTDR--AKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTK 233 (289)
Q Consensus 156 a~~~i~aa~~p~--a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~ 233 (289)
|+++++++..+. ..+++|||++|+.+|++|+...|++.++..........+ . + .+.+
T Consensus 242 a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~-~------------------~--~~~~ 300 (348)
T PRK15181 242 IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEP-I------------------Y--KDFR 300 (348)
T ss_pred HHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCc-c------------------c--CCCC
Confidence 999988876542 467999999999999999999999999854221000000 0 0 0000
Q ss_pred cccccchhhhhhhhcccccccccHHHHHh-cCCCCCcChHHHHHHHHHHHHHCC
Q 042656 234 MEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFVDTMKSIRTWVKKLREMK 286 (289)
Q Consensus 234 l~~l~~w~f~d~~~~~~~~~~~d~~Kar~-~Gw~~~~dt~e~~~~~~~~lr~~~ 286 (289)
. .......+|++|+++ +||+|.++++|++.++++|++..+
T Consensus 301 ~-------------~~~~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~~ 341 (348)
T PRK15181 301 D-------------GDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKH 341 (348)
T ss_pred C-------------CcccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhc
Confidence 0 011146789999999 599999999999999999998753
No 3
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=3.1e-20 Score=170.35 Aligned_cols=229 Identities=15% Similarity=0.131 Sum_probs=173.8
Q ss_pred ccccCcccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHH--
Q 042656 4 CEIHYTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIA-- 80 (289)
Q Consensus 4 ~~~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L-- 80 (289)
|.+.|..||++|..-...|+.+|.+.|+. +..+|+|+..+.| ...||+ +...|.+|++|..| ...|...|++
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~a-m~~~gv~~~vFSStAavYG~--p~~~PI~E~~~~~p--~NPYG~sKlm~E 150 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEA-MLQTGVKKFIFSSTAAVYGE--PTTSPISETSPLAP--INPYGRSKLMSE 150 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHH-HHHhCCCEEEEecchhhcCC--CCCcccCCCCCCCC--CCcchhHHHHHH
Confidence 56789999999999999999999999999 8899999999966 788998 77899999999885 2226665544
Q ss_pred ---Hh--cCCCceEEEeccCceeecCC-Cch------hhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCccccccccc
Q 042656 81 ---AS--YSPAVTYSVHRSSIIIGASS-RSL------NNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCD 148 (289)
Q Consensus 81 ---~e--~~~g~~~~ivRP~~V~G~~~-gn~------~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~ 148 (289)
++ +..+|.++++|.+++.|..+ |.+ -+.++++.+-+|+-|. -.-..||.=. |- .-..++||
T Consensus 151 ~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r-~~l~ifG~DY----~T--~DGT~iRD 223 (329)
T COG1087 151 EILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKR-DKLFIFGDDY----DT--KDGTCIRD 223 (329)
T ss_pred HHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCC-ceeEEeCCCC----CC--CCCCeeee
Confidence 44 56789999999999999964 222 3555666555555211 1113341111 11 11259999
Q ss_pred ccchHHHHHHHHHHhcCCCc--CCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHH
Q 042656 149 MSDSRVLAEQQIWAATTDRA--KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEK 226 (289)
Q Consensus 149 ~~~~~~la~~~i~aa~~p~a--~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k 226 (289)
.+.+.+||++++.|...=.. .+++||+.+|..+|-.|+++...+..|.+... +..+
T Consensus 224 YIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~----------~~~~------------ 281 (329)
T COG1087 224 YIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPV----------EIAP------------ 281 (329)
T ss_pred eeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCce----------eeCC------------
Confidence 99999999999999964332 33699999999999999999999999976543 1111
Q ss_pred hCCCccccccccchhhhhhhhcccccccccHHHHHhc-CCCCCc-ChHHHHHHHHHHHHH
Q 042656 227 HGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFV-DTMKSIRTWVKKLRE 284 (289)
Q Consensus 227 ~gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~-dt~e~~~~~~~~lr~ 284 (289)
.+. |+.-.++.|.+|||+. ||+|.+ |+++.++++++|.++
T Consensus 282 -----RR~-------------GDpa~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~~ 323 (329)
T COG1087 282 -----RRA-------------GDPAILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQQ 323 (329)
T ss_pred -----CCC-------------CCCceeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhhh
Confidence 111 3445789999999995 999999 899999999999873
No 4
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.82 E-value=6e-19 Score=166.09 Aligned_cols=232 Identities=13% Similarity=0.133 Sum_probs=160.8
Q ss_pred cCcccccCCchhhccChHHHHHhhhhHhhh--------ccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHH
Q 042656 7 HYTGPISDPSLTVGASSRSLHNSLLPLAVH--------TNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVE 77 (289)
Q Consensus 7 ~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~--------tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qE 77 (289)
+++.+..+|.....+|+.++.+.++.+.-. .|++++..+| ...||.......|++|+.|.. |...|...
T Consensus 86 ~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~--p~s~Y~~s 163 (355)
T PRK10217 86 HVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYA--PSSPYSAS 163 (355)
T ss_pred CcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCC--CCChhHHH
Confidence 445566788999999999999999995422 4667887656 457775322245789998755 45557765
Q ss_pred HHHHh-------cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCccccccccccc
Q 042656 78 DIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMS 150 (289)
Q Consensus 78 d~L~e-------~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~ 150 (289)
+...| +..++.++++||+.|||+.... .. ..+..+-.+ ..|.|+++ .|++. +.+|++
T Consensus 164 K~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~-~~-~~~~~~~~~---~~~~~~~~--------~g~g~---~~~~~i 227 (355)
T PRK10217 164 KASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP-EK-LIPLMILNA---LAGKPLPV--------YGNGQ---QIRDWL 227 (355)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc-cc-HHHHHHHHH---hcCCCceE--------eCCCC---eeeCcC
Confidence 55544 3468999999999999997421 01 111111111 25788888 77665 889999
Q ss_pred chHHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCC
Q 042656 151 DSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLY 230 (289)
Q Consensus 151 ~~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~ 230 (289)
+++++|++++.++.++ ..+++|||++|+.+|+.++...|++.+|..... .|..+... . . +. .+ .
T Consensus 228 ~v~D~a~a~~~~~~~~-~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~----~~~~~~~~-~---~----~~-~~--~ 291 (355)
T PRK10217 228 YVEDHARALYCVATTG-KVGETYNIGGHNERKNLDVVETICELLEELAPN----KPQGVAHY-R---D----LI-TF--V 291 (355)
T ss_pred cHHHHHHHHHHHHhcC-CCCCeEEeCCCCcccHHHHHHHHHHHhcccccc----cccccccc-c---c----cc-ee--c
Confidence 9999999999888764 467999999999999999999999999975432 12111000 0 0 00 00 0
Q ss_pred ccccccccchhhhhhhhcccccccccHHHHHh-cCCCCCcChHHHHHHHHHHHHHC
Q 042656 231 KTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFVDTMKSIRTWVKKLREM 285 (289)
Q Consensus 231 ~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~-~Gw~~~~dt~e~~~~~~~~lr~~ 285 (289)
+... +......+|++|+++ +||+|.+++.|++.++++|+++.
T Consensus 292 ~~~~-------------~~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~ 334 (355)
T PRK10217 292 ADRP-------------GHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN 334 (355)
T ss_pred CCCC-------------CCCcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhC
Confidence 0000 112245789999988 59999999999999999999875
No 5
>PLN02427 UDP-apiose/xylose synthase
Probab=99.80 E-value=3.1e-18 Score=163.73 Aligned_cols=230 Identities=10% Similarity=0.026 Sum_probs=150.2
Q ss_pred ccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCC--------------------
Q 042656 10 GPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLP-------------------- 68 (289)
Q Consensus 10 ~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p-------------------- 68 (289)
.+..+|...+..|+.++.+.|+. +.+.| |++..+| ...||.. ...+..|+.|..+
T Consensus 101 ~~~~~~~~~~~~n~~gt~~ll~a-a~~~~-~r~v~~SS~~vYg~~--~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~ 176 (386)
T PLN02427 101 DYNTRPLDTIYSNFIDALPVVKY-CSENN-KRLIHFSTCEVYGKT--IGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIE 176 (386)
T ss_pred hhhhChHHHHHHHHHHHHHHHHH-HHhcC-CEEEEEeeeeeeCCC--cCCCCCcccccccccccccccccccccccCCCC
Confidence 34467777788899999999887 55666 8887766 6677752 1222333333111
Q ss_pred CCCChHHHHHHHHh-------cCCCceEEEeccCceeecCCC---------chhhhHHHHHHHHHHHHHhCCCeEEEecc
Q 042656 69 FPNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSR---------SLNNSLLTLAVYATICRHQGLPFRYLAIH 132 (289)
Q Consensus 69 ~p~fyy~qEd~L~e-------~~~g~~~~ivRP~~V~G~~~g---------n~~nl~~~l~vyaal~~~~g~pl~f~~~~ 132 (289)
.|...|...+...| +..++.++++||++|||+... ..+..++...+..+ ..|.|+.+
T Consensus 177 ~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~---- 249 (386)
T PLN02427 177 KQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL---LRREPLKL---- 249 (386)
T ss_pred ccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHH---hcCCCeEE----
Confidence 12334776665555 346899999999999999631 01111111111111 25788877
Q ss_pred ccCCCCCcccccccccccchHHHHHHHHHHhcCCC-cCCCeeEecCC-CccCHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 042656 133 GSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDR-AKNQAFNCTNG-DVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVV 210 (289)
Q Consensus 133 ~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~-a~ge~FNi~dg-~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~ 210 (289)
.|++. +.+|+++++++|++++.|+.++. ..|++|||++| +.+|++|+...|++.+|.....+. ......
T Consensus 250 ----~g~g~---~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~--~~~~~~ 320 (386)
T PLN02427 250 ----VDGGQ---SQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPA--LEEPTV 320 (386)
T ss_pred ----ECCCC---ceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcccccccc--cccccc
Confidence 66553 78899999999999999998875 46799999998 599999999999999996432210 000000
Q ss_pred HHHHHhHHHHHHHHHHhCCCccccccccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHH
Q 042656 211 EMMEEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLRE 284 (289)
Q Consensus 211 ~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~ 284 (289)
.... ..... .. + ........|++|+|+. ||.|.++++++++++++|+++
T Consensus 321 -~~~~----------------~~~~~-~~--~-----~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~ 370 (386)
T PLN02427 321 -DVSS----------------KEFYG-EG--Y-----DDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHK 370 (386)
T ss_pred -ccCc----------------ccccC-cc--c-----cchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHH
Confidence 0000 00000 00 0 1112567899999994 999999999999999999875
No 6
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.80 E-value=1.6e-18 Score=157.65 Aligned_cols=227 Identities=16% Similarity=0.163 Sum_probs=170.6
Q ss_pred ccccCcccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCC-CCCCCCCC-CCCChHHHHHHH
Q 042656 4 CEIHYTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPF-KEDSVRLP-FPNFYYAVEDIA 80 (289)
Q Consensus 4 ~~~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~-~E~~pr~p-~p~fyy~qEd~L 80 (289)
|..+|++|..+|..+.+.|+.++...|+.+...-++|++..+| .++||+. .+.-. .|.++.+| .| |++.++.
T Consensus 89 a~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds--~~~~~~~E~s~~nPtnp---yAasKaA 163 (331)
T KOG0747|consen 89 AQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDS--DEDAVVGEASLLNPTNP---YAASKAA 163 (331)
T ss_pred hhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCc--cccccccccccCCCCCc---hHHHHHH
Confidence 6778999999999999999999999999955445889999888 8999974 22222 27777775 45 7777776
Q ss_pred Hh-------cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchH
Q 042656 81 AS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSR 153 (289)
Q Consensus 81 ~e-------~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~ 153 (289)
.| ++.+++++++|-.+||||..- ---+++-++-++ ..+.|.+. -|++. ++++..+++
T Consensus 164 aE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~--~~klipkFi~l~---~~~~~~~i--------~g~g~---~~rs~l~ve 227 (331)
T KOG0747|consen 164 AEMLVRSYGRSYGLPVVTTRMNNVYGPNQY--PEKLIPKFIKLA---MRGKEYPI--------HGDGL---QTRSYLYVE 227 (331)
T ss_pred HHHHHHHHhhccCCcEEEEeccCccCCCcC--hHHHhHHHHHHH---HhCCCcce--------ecCcc---cceeeEeHH
Confidence 66 567999999999999999741 111222222222 36899999 88876 999999999
Q ss_pred HHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccc
Q 042656 154 VLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTK 233 (289)
Q Consensus 154 ~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~ 233 (289)
++++++..++. ...-||+|||.+.+..+-.+|..-|.+.++....-.+ ..| .+ .++. ..+
T Consensus 228 D~~ea~~~v~~-Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~-~~p-~~-~~v~----------------dRp 287 (331)
T KOG0747|consen 228 DVSEAFKAVLE-KGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNID-TEP-FI-FFVE----------------DRP 287 (331)
T ss_pred HHHHHHHHHHh-cCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCC-CCC-cc-eecC----------------CCC
Confidence 99999765554 4456999999999999999999999999998654211 011 00 1111 011
Q ss_pred cccccchhhhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHHHHHC
Q 042656 234 MEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKKLREM 285 (289)
Q Consensus 234 l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~lr~~ 285 (289)
. + +..-.+|.+|++++||.|.+...+||+++++||.+.
T Consensus 288 ~-------------n-d~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~~~ 325 (331)
T KOG0747|consen 288 Y-------------N-DLRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYTKN 325 (331)
T ss_pred c-------------c-cccccccHHHHHhcCCcccCcHHHHHHHHHHHHHhh
Confidence 2 1 113578999999999999999999999999999874
No 7
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.79 E-value=4.9e-18 Score=159.86 Aligned_cols=234 Identities=13% Similarity=0.108 Sum_probs=157.6
Q ss_pred cccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCC---C--CCCChHHHHHHHHh
Q 042656 9 TGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRL---P--FPNFYYAVEDIAAS 82 (289)
Q Consensus 9 ~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~---p--~p~fyy~qEd~L~e 82 (289)
..+..+|.....+|+.++.+.++. +...| +++..+| ...||. ....|+.|+++.. | .|...|.+.+...|
T Consensus 82 ~~~~~~p~~~~~~n~~~~~~ll~a-a~~~~-~~~v~~SS~~vyg~--~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e 157 (347)
T PRK11908 82 ATYVKQPLRVFELDFEANLPIVRS-AVKYG-KHLVFPSTSEVYGM--CPDEEFDPEASPLVYGPINKPRWIYACSKQLMD 157 (347)
T ss_pred HHhhcCcHHHHHHHHHHHHHHHHH-HHhcC-CeEEEEecceeecc--CCCcCcCccccccccCcCCCccchHHHHHHHHH
Confidence 445678999999999999998887 55677 7777666 567775 2345778776432 1 24456887777665
Q ss_pred -------cCCCceEEEeccCceeecCCCch------hhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccc
Q 042656 83 -------YSPAVTYSVHRSSIIIGASSRSL------NNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDM 149 (289)
Q Consensus 83 -------~~~g~~~~ivRP~~V~G~~~gn~------~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~ 149 (289)
...++.++++||+.|||+...+. ...+....+... ..|.|+.+ .|++. +.+|+
T Consensus 158 ~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~--------~~~g~---~~r~~ 223 (347)
T PRK11908 158 RVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHI---VRGEPISL--------VDGGS---QKRAF 223 (347)
T ss_pred HHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHH---hCCCceEE--------ecCCc---eeecc
Confidence 34689999999999999974211 111111111122 25888887 66543 88999
Q ss_pred cchHHHHHHHHHHhcCCC--cCCCeeEecCC-CccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHH
Q 042656 150 SDSRVLAEQQIWAATTDR--AKNQAFNCTNG-DVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEK 226 (289)
Q Consensus 150 ~~~~~la~~~i~aa~~p~--a~ge~FNi~dg-~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k 226 (289)
++++++|++++.++.++. +.|++|||+++ ..+|++|+...|++.+|....... .+..+ ++.......
T Consensus 224 i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~--~~~~~-~~~~~~~~~------- 293 (347)
T PRK11908 224 TDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAE--SAKKV-KLVETTSGA------- 293 (347)
T ss_pred ccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccc--ccccc-ccccCCchh-------
Confidence 999999999999998864 56899999987 589999999999999996532200 00000 000000000
Q ss_pred hCCCccccccccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHHC
Q 042656 227 HGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLREM 285 (289)
Q Consensus 227 ~gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~~ 285 (289)
.... . .....+...|++|+++. ||.|.+++++++.++++|+++.
T Consensus 294 ------~~~~--~-------~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~ 338 (347)
T PRK11908 294 ------YYGK--G-------YQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGH 338 (347)
T ss_pred ------ccCc--C-------cchhccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 0000 0 01112456789999985 9999999999999999988753
No 8
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.79 E-value=8.1e-18 Score=154.40 Aligned_cols=222 Identities=16% Similarity=0.117 Sum_probs=155.4
Q ss_pred ccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCC--CCC-CChHHHHHHHHh---
Q 042656 10 GPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRL--PFP-NFYYAVEDIAAS--- 82 (289)
Q Consensus 10 ~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~--p~p-~fyy~qEd~L~e--- 82 (289)
.+..+|......|+.++.+.++. +...|+|++...+ ...||+ ....|.+|+++.. +.| +..|...+.+.|
T Consensus 65 ~~~~~~~~~~~~n~~~~~~ll~~-~~~~~~~~~i~~SS~~vyg~--~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~ 141 (306)
T PLN02725 65 ANMTYPADFIRENLQIQTNVIDA-AYRHGVKKLLFLGSSCIYPK--FAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMC 141 (306)
T ss_pred hhhhCcHHHHHHHhHHHHHHHHH-HHHcCCCeEEEeCceeecCC--CCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHH
Confidence 45578888899999999999998 5578889888766 567775 3467899988432 123 334665554444
Q ss_pred ----cCCCceEEEeccCceeecCCC-ch--hhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHH
Q 042656 83 ----YSPAVTYSVHRSSIIIGASSR-SL--NNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVL 155 (289)
Q Consensus 83 ----~~~g~~~~ivRP~~V~G~~~g-n~--~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~l 155 (289)
+..++.++++||+.|||+... .. .++...+.-....++..|.|+.+. +|++. +.+++++++++
T Consensus 142 ~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------~~~g~---~~~~~i~v~Dv 211 (306)
T PLN02725 142 QAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVV-------WGSGS---PLREFLHVDDL 211 (306)
T ss_pred HHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEE-------cCCCC---eeeccccHHHH
Confidence 346899999999999999641 10 111111111111123457776541 45443 78899999999
Q ss_pred HHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccc
Q 042656 156 AEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKME 235 (289)
Q Consensus 156 a~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~ 235 (289)
|++++++++.+. .++.|||++|+.+|+.|+...|++.+|.+.... +.. ....
T Consensus 212 ~~~~~~~~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~----------~~~-----------------~~~~ 263 (306)
T PLN02725 212 ADAVVFLMRRYS-GAEHVNVGSGDEVTIKELAELVKEVVGFEGELV----------WDT-----------------SKPD 263 (306)
T ss_pred HHHHHHHHhccc-cCcceEeCCCCcccHHHHHHHHHHHhCCCCcee----------ecC-----------------CCCC
Confidence 999999998753 457899999999999999999999998654221 000 0000
Q ss_pred cccchhhhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHHHHHC
Q 042656 236 EITCFEALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKKLREM 285 (289)
Q Consensus 236 ~l~~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~lr~~ 285 (289)
......+|.+|+|++||+|.++.++++.++++|+++.
T Consensus 264 -------------~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~ 300 (306)
T PLN02725 264 -------------GTPRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLEN 300 (306)
T ss_pred -------------cccccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 0114568999999899999999999999999998864
No 9
>PLN00016 RNA-binding protein; Provisional
Probab=99.79 E-value=6.7e-18 Score=161.34 Aligned_cols=211 Identities=14% Similarity=0.132 Sum_probs=153.3
Q ss_pred hHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHhcCCCceEEEeccCceeecC
Q 042656 23 SRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGAS 101 (289)
Q Consensus 23 ~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e~~~g~~~~ivRP~~V~G~~ 101 (289)
..++.+.++. +.+.|+|++..++ ...||. ....|..|+++..|. ..+..+|+++.+ .++.|+++||+.|||+.
T Consensus 142 ~~~~~~ll~a-a~~~gvkr~V~~SS~~vyg~--~~~~p~~E~~~~~p~-~sK~~~E~~l~~--~~l~~~ilRp~~vyG~~ 215 (378)
T PLN00016 142 LDEVEPVADW-AKSPGLKQFLFCSSAGVYKK--SDEPPHVEGDAVKPK-AGHLEVEAYLQK--LGVNWTSFRPQYIYGPG 215 (378)
T ss_pred HHHHHHHHHH-HHHcCCCEEEEEccHhhcCC--CCCCCCCCCCcCCCc-chHHHHHHHHHH--cCCCeEEEeceeEECCC
Confidence 4556666666 6678999998766 556775 335688898876643 256778888765 58999999999999997
Q ss_pred CCc-hhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcCCCeeEecCCCc
Q 042656 102 SRS-LNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDV 180 (289)
Q Consensus 102 ~gn-~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~ge~FNi~dg~~ 180 (289)
..+ ...... ..+ ..|.|+++ ||++. +.+++++++++|++++.++.++...+++|||++++.
T Consensus 216 ~~~~~~~~~~-----~~~--~~~~~i~~--------~g~g~---~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~ 277 (378)
T PLN00016 216 NNKDCEEWFF-----DRL--VRGRPVPI--------PGSGI---QLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRA 277 (378)
T ss_pred CCCchHHHHH-----HHH--HcCCceee--------cCCCC---eeeceecHHHHHHHHHHHhcCccccCCEEEecCCCc
Confidence 532 222111 111 36888988 88764 789999999999999999998877789999999999
Q ss_pred cCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCc-cccccccchhhhhhhhcccccccccHHH
Q 042656 181 FTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYK-TKMEEITCFEALNTVLHLQFQHVSSMNK 259 (289)
Q Consensus 181 ~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~-~~l~~l~~w~f~d~~~~~~~~~~~d~~K 259 (289)
+|+.|+...|++.+|.+... .+.+...+ . .+.+. .++ ...+...|++|
T Consensus 278 ~s~~el~~~i~~~~g~~~~i----~~~~~~~~------~-------~~~~~~~p~--------------~~~~~~~d~~k 326 (378)
T PLN00016 278 VTFDGMAKACAKAAGFPEEI----VHYDPKAV------G-------FGAKKAFPF--------------RDQHFFASPRK 326 (378)
T ss_pred cCHHHHHHHHHHHhCCCCce----eecCcccc------C-------ccccccccc--------------cccccccCHHH
Confidence 99999999999999986532 11111000 0 00000 001 11245679999
Q ss_pred HHhc-CCCCCcChHHHHHHHHHHHHHCCCC
Q 042656 260 SREF-GFFGFVDTMKSIRTWVKKLREMKII 288 (289)
Q Consensus 260 ar~~-Gw~~~~dt~e~~~~~~~~lr~~~ii 288 (289)
+++. ||+|.+++.|++.++++||++.+-+
T Consensus 327 a~~~LGw~p~~~l~egl~~~~~~~~~~~~~ 356 (378)
T PLN00016 327 AKEELGWTPKFDLVEDLKDRYELYFGRGRD 356 (378)
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 9995 9999999999999999999988754
No 10
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.78 E-value=5.6e-18 Score=173.13 Aligned_cols=237 Identities=14% Similarity=0.093 Sum_probs=162.7
Q ss_pred cCcccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCC---C--CCCChHHHHHHH
Q 042656 7 HYTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRL---P--FPNFYYAVEDIA 80 (289)
Q Consensus 7 ~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~---p--~p~fyy~qEd~L 80 (289)
++..+..+|.....+|+.++.+.|+. +..+| |++..+| ...||. ....|++|++|.. | .|...|...|..
T Consensus 394 ~~~~~~~~~~~~~~~Nv~~t~~ll~a-~~~~~-~~~V~~SS~~vyg~--~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~ 469 (660)
T PRK08125 394 TPIEYTRNPLRVFELDFEENLKIIRY-CVKYN-KRIIFPSTSEVYGM--CTDKYFDEDTSNLIVGPINKQRWIYSVSKQL 469 (660)
T ss_pred CchhhccCHHHHHHhhHHHHHHHHHH-HHhcC-CeEEEEcchhhcCC--CCCCCcCccccccccCCCCCCccchHHHHHH
Confidence 34456678888899999999999999 55677 8888766 567875 3356899998752 2 234457766665
Q ss_pred Hh-------cCCCceEEEeccCceeecCCCch--h----hhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccc
Q 042656 81 AS-------YSPAVTYSVHRSSIIIGASSRSL--N----NSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFC 147 (289)
Q Consensus 81 ~e-------~~~g~~~~ivRP~~V~G~~~gn~--~----nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~ 147 (289)
.| +..+++++++||++|||+...+. + ..+.+..+..+ ..|.|+.+ +|++. +.+
T Consensus 470 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~---~~~~~i~~--------~g~g~---~~r 535 (660)
T PRK08125 470 LDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNL---VEGSPIKL--------VDGGK---QKR 535 (660)
T ss_pred HHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHh---cCCCCeEE--------eCCCc---eee
Confidence 55 34589999999999999975321 0 11222222222 25788888 77654 899
Q ss_pred cccchHHHHHHHHHHhcCCC--cCCCeeEecCCC-ccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHH
Q 042656 148 DMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGD-VFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIV 224 (289)
Q Consensus 148 ~~~~~~~la~~~i~aa~~p~--a~ge~FNi~dg~-~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~ 224 (289)
|+++++++|++++.+++++. +.|++|||++|+ .+|++|+...|++.+|.+..... .|... ...
T Consensus 536 d~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~--~~~~~--~~~---------- 601 (660)
T PRK08125 536 CFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDH--FPPFA--GFR---------- 601 (660)
T ss_pred ceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCccccc--CCccc--ccc----------
Confidence 99999999999999998753 458999999996 79999999999999996422110 11100 000
Q ss_pred HHhCCCccccccccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHHCC
Q 042656 225 EKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLREMK 286 (289)
Q Consensus 225 ~k~gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~~~ 286 (289)
..+....+.. ...+......|++|+|+. ||+|..+.+|++.++++|+++..
T Consensus 602 --------~~~~~~~~~~---~~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~ 653 (660)
T PRK08125 602 --------VVESSSYYGK---GYQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTV 653 (660)
T ss_pred --------cccccccccc---ccccccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence 0000000000 001112456899999995 99999999999999999998753
No 11
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.77 E-value=9.2e-18 Score=163.98 Aligned_cols=218 Identities=15% Similarity=0.104 Sum_probs=153.7
Q ss_pred CcccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCC--C-CCCChHHH-----HH
Q 042656 8 YTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRL--P-FPNFYYAV-----ED 78 (289)
Q Consensus 8 v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~--p-~p~fyy~q-----Ed 78 (289)
+..+..+|...+.+|+.++.+.|+. +...|. ++..++ ..+||. +...|.+|+.... | .|...|.. |+
T Consensus 197 ~~~~~~~p~~~~~~Nv~gT~nLlea-a~~~g~-r~V~~SS~~VYg~--~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~ 272 (436)
T PLN02166 197 PVHYKYNPVKTIKTNVMGTLNMLGL-AKRVGA-RFLLTSTSEVYGD--PLEHPQKETYWGNVNPIGERSCYDEGKRTAET 272 (436)
T ss_pred chhhccCHHHHHHHHHHHHHHHHHH-HHHhCC-EEEEECcHHHhCC--CCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence 3445568889999999999999988 556775 676656 667886 4456888885211 1 23334554 55
Q ss_pred HHHh--cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHH
Q 042656 79 IAAS--YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLA 156 (289)
Q Consensus 79 ~L~e--~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la 156 (289)
.+.+ +..++.++++||++|||+.....-+.+..-.+-.+ ..|.++.+ .|++. +.+|+++++++|
T Consensus 273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~---l~~~~i~v--------~g~g~---~~rdfi~V~Dva 338 (436)
T PLN02166 273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQT---IRKQPMTV--------YGDGK---QTRSFQYVSDLV 338 (436)
T ss_pred HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHH---hcCCCcEE--------eCCCC---eEEeeEEHHHHH
Confidence 5554 34689999999999999973200011111111111 25778887 77654 789999999999
Q ss_pred HHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccccc
Q 042656 157 EQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEE 236 (289)
Q Consensus 157 ~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~ 236 (289)
++++.+++.+ .+++|||++|+.+|++|+...|++.+|.+...- +.. .+-.
T Consensus 339 ~ai~~~~~~~--~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~----------~~p-----------------~~~~- 388 (436)
T PLN02166 339 DGLVALMEGE--HVGPFNLGNPGEFTMLELAEVVKETIDSSATIE----------FKP-----------------NTAD- 388 (436)
T ss_pred HHHHHHHhcC--CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCee----------eCC-----------------CCCC-
Confidence 9999988754 356999999999999999999999998653220 000 0000
Q ss_pred ccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHHC
Q 042656 237 ITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLREM 285 (289)
Q Consensus 237 l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~~ 285 (289)
......+|++|+++. ||+|.+++++++.++++|+++.
T Consensus 389 ------------~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~ 426 (436)
T PLN02166 389 ------------DPHKRKPDISKAKELLNWEPKISLREGLPLMVSDFRNR 426 (436)
T ss_pred ------------CccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 112457899999995 9999999999999999999764
No 12
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.77 E-value=1.3e-17 Score=163.10 Aligned_cols=216 Identities=16% Similarity=0.097 Sum_probs=152.5
Q ss_pred ccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCC--CC-CCCChHHHHHHHHh---
Q 042656 10 GPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVR--LP-FPNFYYAVEDIAAS--- 82 (289)
Q Consensus 10 ~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr--~p-~p~fyy~qEd~L~e--- 82 (289)
.+..+|...+.+|+.++.+.|+. +..+|. ++..++ ...||. ....|.+|+... .| .|+..|.+.|...|
T Consensus 198 ~~~~~p~~~~~~Nv~gt~nLlea-a~~~g~-r~V~~SS~~VYg~--~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~ 273 (442)
T PLN02206 198 HYKFNPVKTIKTNVVGTLNMLGL-AKRVGA-RFLLTSTSEVYGD--PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLT 273 (442)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHH-HHHhCC-EEEEECChHHhCC--CCCCCCCccccccCCCCCccchHHHHHHHHHHHH
Confidence 34467889999999999999998 667785 676656 567875 345678888532 12 23444665444444
Q ss_pred ----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHH
Q 042656 83 ----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQ 158 (289)
Q Consensus 83 ----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~ 158 (289)
+..++.++++||+.|||+.....-..+....+..++ .+.|+.+ +|++. +.+|+++++++|++
T Consensus 274 ~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l---~~~~i~i--------~g~G~---~~rdfi~V~Dva~a 339 (442)
T PLN02206 274 MDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQAL---RKEPLTV--------YGDGK---QTRSFQFVSDLVEG 339 (442)
T ss_pred HHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHH---cCCCcEE--------eCCCC---EEEeEEeHHHHHHH
Confidence 346899999999999999631100011111112222 5778888 77764 88999999999999
Q ss_pred HHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccccccc
Q 042656 159 QIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEIT 238 (289)
Q Consensus 159 ~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~ 238 (289)
+++|+.++ .+++|||++|+.+|++|+...|++.+|.+.... +.. ...
T Consensus 340 i~~a~e~~--~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~----------~~p-----------------~~~---- 386 (442)
T PLN02206 340 LMRLMEGE--HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIE----------FRP-----------------NTE---- 386 (442)
T ss_pred HHHHHhcC--CCceEEEcCCCceeHHHHHHHHHHHhCCCCcee----------eCC-----------------CCC----
Confidence 99998754 356999999999999999999999998543210 000 000
Q ss_pred chhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHHC
Q 042656 239 CFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLREM 285 (289)
Q Consensus 239 ~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~~ 285 (289)
.......+|++|+++. ||+|.+++.|++.++++|+++.
T Consensus 387 ---------~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~ 425 (442)
T PLN02206 387 ---------DDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQR 425 (442)
T ss_pred ---------CCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 0112456899999995 9999999999999999999863
No 13
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.75 E-value=6e-17 Score=151.93 Aligned_cols=221 Identities=16% Similarity=0.085 Sum_probs=153.1
Q ss_pred cCcccccCCchhhccChHHHHHhhhhHhhhccCc-----eeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 042656 7 HYTGPISDPSLTVGASSRSLHNSLLPLAVHTNIC-----KYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIA 80 (289)
Q Consensus 7 ~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k-----~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L 80 (289)
++..+..+|...+.+|+.++.+.++. +...|.+ ++..+| ...||. . ..|.+|++|.. |...|.+.+..
T Consensus 95 ~~~~~~~~~~~~~~~N~~gt~~ll~~-~~~~~~~~~~~~~~v~~Ss~~vyg~--~-~~~~~E~~~~~--p~~~Y~~sK~~ 168 (340)
T PLN02653 95 HVAVSFEMPDYTADVVATGALRLLEA-VRLHGQETGRQIKYYQAGSSEMYGS--T-PPPQSETTPFH--PRSPYAVAKVA 168 (340)
T ss_pred chhhhhhChhHHHHHHHHHHHHHHHH-HHHhccccccceeEEEeccHHHhCC--C-CCCCCCCCCCC--CCChhHHHHHH
Confidence 45556778888899999999999998 5566764 665545 567885 2 23899999866 44457766665
Q ss_pred Hh-------cCCCceEEEeccCceeecCCC-chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccch
Q 042656 81 AS-------YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDS 152 (289)
Q Consensus 81 ~e-------~~~g~~~~ivRP~~V~G~~~g-n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~ 152 (289)
.| ...++.++..|+..+||+..+ +++......++. .+ ..|.++++- .|++. +.+|++++
T Consensus 169 ~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~-~~--~~~~~~~~~-------~g~g~---~~rd~i~v 235 (340)
T PLN02653 169 AHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVG-RI--KVGLQKKLF-------LGNLD---ASRDWGFA 235 (340)
T ss_pred HHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHH-HH--HcCCCCceE-------eCCCc---ceecceeH
Confidence 55 345788889999999999653 332222111111 11 245555430 36554 89999999
Q ss_pred HHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcc
Q 042656 153 RVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKT 232 (289)
Q Consensus 153 ~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~ 232 (289)
+++|++++.++.++ .++.|||++|+.+|++|+...|++.+|.+.... ..+. ..
T Consensus 236 ~D~a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~---~~~~----------------------~~ 288 (340)
T PLN02653 236 GDYVEAMWLMLQQE--KPDDYVVATEESHTVEEFLEEAFGYVGLNWKDH---VEID----------------------PR 288 (340)
T ss_pred HHHHHHHHHHHhcC--CCCcEEecCCCceeHHHHHHHHHHHcCCCCCcc---eeeC----------------------cc
Confidence 99999999998865 357899999999999999999999999742110 0000 00
Q ss_pred ccccccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHH
Q 042656 233 KMEEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLRE 284 (289)
Q Consensus 233 ~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~ 284 (289)
.+.. ........|.+|+++. ||+|.+++.|+++++++++++
T Consensus 289 ~~~~-----------~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~ 330 (340)
T PLN02653 289 YFRP-----------AEVDNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLE 330 (340)
T ss_pred cCCc-----------cccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 0000 0011346799999995 999999999999999997763
No 14
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.75 E-value=2.5e-17 Score=161.17 Aligned_cols=222 Identities=14% Similarity=0.117 Sum_probs=150.4
Q ss_pred cCcccccCC---chhhccChHHHHHhhhhHhhhccCc-eeeccc-ccccCccCCCCCCCCC-----------CCCCC-CC
Q 042656 7 HYTGPISDP---SLTVGASSRSLHNSLLPLAVHTNIC-KYQGLP-FRYFGQLIGHDPPFKE-----------DSVRL-PF 69 (289)
Q Consensus 7 ~v~~~~~~p---~~~~~~~~~~~~~~l~~~~l~tG~k-~yg~~~-~~~~g~~~~~~~P~~E-----------~~pr~-p~ 69 (289)
++..+..+| .....+|+.++.+.|+. +...|++ +...++ ...||. + ..|..| +++.. ..
T Consensus 148 ~~~~~~~~~~~~~~~~~~Nv~gt~nllea-a~~~gv~~~~V~~SS~~vYG~--~-~~~~~E~~i~~~~~~~e~~~~~~~~ 223 (442)
T PLN02572 148 SAPYSMIDRSRAVFTQHNNVIGTLNVLFA-IKEFAPDCHLVKLGTMGEYGT--P-NIDIEEGYITITHNGRTDTLPYPKQ 223 (442)
T ss_pred cChhhhcChhhHHHHHHHHHHHHHHHHHH-HHHhCCCccEEEEecceecCC--C-CCCCcccccccccccccccccCCCC
Confidence 345555555 45678999999999988 6677875 666545 667875 2 233333 33222 24
Q ss_pred CCChHHHHHHHHh-------cCCCceEEEeccCceeecCCCc---------------hhhhHHHHHHHHHHHHHhCCCeE
Q 042656 70 PNFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRS---------------LNNSLLTLAVYATICRHQGLPFR 127 (289)
Q Consensus 70 p~fyy~qEd~L~e-------~~~g~~~~ivRP~~V~G~~~gn---------------~~nl~~~l~vyaal~~~~g~pl~ 127 (289)
|...|...|...| +..++.++++||++|||+.... .+..+....+..+ ..|.|++
T Consensus 224 P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~---~~g~~i~ 300 (442)
T PLN02572 224 ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQA---AVGHPLT 300 (442)
T ss_pred CCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHH---hcCCCce
Confidence 5555766555544 3469999999999999997421 0111221112222 2588888
Q ss_pred EEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcCC--CeeEecCCCccCHHHHHHHHHHH---hCCCCCCCC
Q 042656 128 YLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKN--QAFNCTNGDVFTWKSLWKLLSEI---FDVEFVPFD 202 (289)
Q Consensus 128 f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~g--e~FNi~dg~~~s~~~lw~~la~~---~G~~~~~~~ 202 (289)
+ .|++. +.+|+++++++|++++.|+..+.+.| ++||++. +.+|++|+...|++. +|.+...-
T Consensus 301 v--------~g~G~---~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~~~~- 367 (442)
T PLN02572 301 V--------YGKGG---QTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDVEVI- 367 (442)
T ss_pred e--------cCCCC---EEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCCCee-
Confidence 8 77664 88999999999999999988664455 6899975 679999999999999 88653320
Q ss_pred CCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccchhhhhhhhcccccccccHHHHHhcCCCCCc---ChHHHHHHHH
Q 042656 203 EKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFV---DTMKSIRTWV 279 (289)
Q Consensus 203 ~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~---dt~e~~~~~~ 279 (289)
..|. +... ........|.+|+|++||.|.+ ++.+++.+++
T Consensus 368 -~~p~-------------------------~~~~-----------~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~ 410 (442)
T PLN02572 368 -SVPN-------------------------PRVE-----------AEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFA 410 (442)
T ss_pred -eCCC-------------------------Cccc-----------ccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHH
Confidence 0110 0000 0112456799999999999999 9999999999
Q ss_pred HHHHHC
Q 042656 280 KKLREM 285 (289)
Q Consensus 280 ~~lr~~ 285 (289)
+|+|+.
T Consensus 411 ~~~~~~ 416 (442)
T PLN02572 411 VKYKDR 416 (442)
T ss_pred HHHHhh
Confidence 999853
No 15
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.75 E-value=1.1e-16 Score=150.60 Aligned_cols=227 Identities=13% Similarity=0.095 Sum_probs=154.8
Q ss_pred CcccccCCchhhccChHHHHHhhhhHhhh--------ccCceeeccc-ccccCccC-CC------C-CCCCCCCCCCCCC
Q 042656 8 YTGPISDPSLTVGASSRSLHNSLLPLAVH--------TNICKYQGLP-FRYFGQLI-GH------D-PPFKEDSVRLPFP 70 (289)
Q Consensus 8 v~~~~~~p~~~~~~~~~~~~~~l~~~~l~--------tG~k~yg~~~-~~~~g~~~-~~------~-~P~~E~~pr~p~p 70 (289)
...+..+|.....+|+.++.+.++...-. .++++++.++ ...||... +. . .|++|+.|.. |
T Consensus 86 ~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~--p 163 (352)
T PRK10084 86 VDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYA--P 163 (352)
T ss_pred CcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCCCC--C
Confidence 34456678899999999999999984422 2566777656 45677420 00 1 2478888765 4
Q ss_pred CChHHHHHHHHh-------cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccc
Q 042656 71 NFYYAVEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTW 143 (289)
Q Consensus 71 ~fyy~qEd~L~e-------~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~ 143 (289)
...|...+...| +..++.++++||+.|||+..... .+. ...+..+ ..|.++++ .|++.
T Consensus 164 ~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~-~~~~~~~---~~~~~~~~--------~~~g~-- 228 (352)
T PRK10084 164 SSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLI-PLVILNA---LEGKPLPI--------YGKGD-- 228 (352)
T ss_pred CChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chH-HHHHHHH---hcCCCeEE--------eCCCC--
Confidence 444776555554 34589999999999999974210 111 1111111 25778887 66654
Q ss_pred cccccccchHHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHH
Q 042656 144 EHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEI 223 (289)
Q Consensus 144 ~~~~~~~~~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i 223 (289)
+.+|+++++++|++++.++..+ ..+++|||++++.+|+.++...+++.+|...+.. .+.. ..+
T Consensus 229 -~~~~~v~v~D~a~a~~~~l~~~-~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~---~~~~--~~~---------- 291 (352)
T PRK10084 229 -QIRDWLYVEDHARALYKVVTEG-KAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKA---TSYR--EQI---------- 291 (352)
T ss_pred -eEEeeEEHHHHHHHHHHHHhcC-CCCceEEeCCCCcCcHHHHHHHHHHHhccccccc---cchh--hhc----------
Confidence 8899999999999998888754 4589999999999999999999999999642210 1110 000
Q ss_pred HHHhCCCccccccccchhhhhhhhcccccccccHHHHHh-cCCCCCcChHHHHHHHHHHHHHC
Q 042656 224 VEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFVDTMKSIRTWVKKLREM 285 (289)
Q Consensus 224 ~~k~gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~-~Gw~~~~dt~e~~~~~~~~lr~~ 285 (289)
+...... .......+|++|+++ +||+|.+++.+++.++++|+++.
T Consensus 292 ----~~~~~~~-------------~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~ 337 (352)
T PRK10084 292 ----TYVADRP-------------GHDRRYAIDASKISRELGWKPQETFESGIRKTVEWYLAN 337 (352)
T ss_pred ----cccccCC-------------CCCceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence 0000000 111245789999998 59999999999999999999874
No 16
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.75 E-value=7.8e-17 Score=152.82 Aligned_cols=243 Identities=15% Similarity=0.085 Sum_probs=171.7
Q ss_pred cCccccc-CCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCC-CCCCCCCCCCCCChHHHHHHHHh-
Q 042656 7 HYTGPIS-DPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPP-FKEDSVRLPFPNFYYAVEDIAAS- 82 (289)
Q Consensus 7 ~v~~~~~-~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P-~~E~~pr~p~p~fyy~qEd~L~e- 82 (289)
.++.... +|-+...+|+.+|.++++. +.++|+|+....| ..+... ....+ -+|+.|...-...+|...+.++|
T Consensus 86 ~~~~~~~~~~~~~~~vNV~gT~nvi~~-c~~~~v~~lIYtSs~~Vvf~--g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~ 162 (361)
T KOG1430|consen 86 PVPDFVENDRDLAMRVNVNGTLNVIEA-CKELGVKRLIYTSSAYVVFG--GEPIINGDESLPYPLKHIDPYGESKALAEK 162 (361)
T ss_pred cCccccccchhhheeecchhHHHHHHH-HHHhCCCEEEEecCceEEeC--CeecccCCCCCCCccccccccchHHHHHHH
Confidence 3455555 6999999999999999999 8999999998766 434322 11234 35666654222346776555555
Q ss_pred ----c--CCCceEEEeccCceeecCCCc-hhhhHHHHHHHHHHHHHhCC-CeEEEeccccCCCCCcccccccccccchHH
Q 042656 83 ----Y--SPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGL-PFRYLAIHGSSLSGNKYTWEHFCDMSDSRV 154 (289)
Q Consensus 83 ----~--~~g~~~~ivRP~~V~G~~~gn-~~nl~~~l~vyaal~~~~g~-pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~ 154 (289)
+ +.++..+++||..|||++... .+.++..+ ..|. .... |+. .+..|+++++|
T Consensus 163 ~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~--------~~g~~~f~~---------g~~---~~~~~~~~~~N 222 (361)
T KOG1430|consen 163 LVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEAL--------KNGGFLFKI---------GDG---ENLNDFTYGEN 222 (361)
T ss_pred HHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHH--------HccCceEEe---------ecc---ccccceEEech
Confidence 2 356999999999999999754 34444433 2343 3444 333 38999999999
Q ss_pred HHHHHHHHhc-----CCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCC-CCCCCCcccHHHHHHHhHHHHHHHHHHh-
Q 042656 155 LAEQQIWAAT-----TDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFV-PFDEKEKFDVVEMMEEKGEIWDEIVEKH- 227 (289)
Q Consensus 155 la~~~i~aa~-----~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~-~~~~~~p~~l~~~~~~~~~~W~~i~~k~- 227 (289)
+|.+++.|+. .+..+||.|+|+||.++..-+.|..|.+.||.... .+ ..|.++..++. .|.+|+.+.
T Consensus 223 va~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~--~~p~~l~~~~~----~l~e~~~~~l 296 (361)
T KOG1430|consen 223 VAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSI--KLPLFLSYFLA----YLLEIVYFLL 296 (361)
T ss_pred hHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCcee--ecchHHHHHHH----HHHHHHHHhc
Confidence 9999998874 45578999999999999999999999999999876 32 26777766655 445555444
Q ss_pred CCCccccccccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHHC
Q 042656 228 GLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLREM 285 (289)
Q Consensus 228 gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~~ 285 (289)
+-..+.++.. . -..+ .....+|..||++. ||.|.++.++++.+++.|++..
T Consensus 297 ~p~~p~lt~~-~----v~~~--~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~ 348 (361)
T KOG1430|consen 297 RPYQPILTRF-R----VALL--GVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASE 348 (361)
T ss_pred cCCCCCcChh-h----eeee--ccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhh
Confidence 2112333221 0 0001 13678999999995 9999999999999999988764
No 17
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.75 E-value=6.5e-17 Score=149.41 Aligned_cols=211 Identities=13% Similarity=0.086 Sum_probs=143.5
Q ss_pred CCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------cCC
Q 042656 14 DPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS-------YSP 85 (289)
Q Consensus 14 ~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e-------~~~ 85 (289)
+|......|+.++.+.|+. +...|+| +...| ...||+ ....|.+|++|..| ...|...|...| ...
T Consensus 85 ~~~~~~~~n~~~t~~ll~~-~~~~~~~-~i~~SS~~vyg~--~~~~~~~E~~~~~p--~~~Y~~sK~~~E~~~~~~~~~~ 158 (308)
T PRK11150 85 DGKYMMDNNYQYSKELLHY-CLEREIP-FLYASSAATYGG--RTDDFIEEREYEKP--LNVYGYSKFLFDEYVRQILPEA 158 (308)
T ss_pred ChHHHHHHHHHHHHHHHHH-HHHcCCc-EEEEcchHHhCc--CCCCCCccCCCCCC--CCHHHHHHHHHHHHHHHHHHHc
Confidence 4556778899999999998 5677765 66655 567775 33446788887654 333665444443 346
Q ss_pred CceEEEeccCceeecCCC--chhhhHHHHHHHHHHHHHhCCCe-EEEeccccCCCCCcccccccccccchHHHHHHHHHH
Q 042656 86 AVTYSVHRSSIIIGASSR--SLNNSLLTLAVYATICRHQGLPF-RYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWA 162 (289)
Q Consensus 86 g~~~~ivRP~~V~G~~~g--n~~nl~~~l~vyaal~~~~g~pl-~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~a 162 (289)
++.++++||++|||+... ..+..+.. +..-....|.+. .+ +|++. ..+|+++++++|++++++
T Consensus 159 ~~~~~~lR~~~vyG~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~--------~g~~~---~~r~~i~v~D~a~a~~~~ 224 (308)
T PRK11150 159 NSQICGFRYFNVYGPREGHKGSMASVAF---HLNNQLNNGENPKLF--------EGSEN---FKRDFVYVGDVAAVNLWF 224 (308)
T ss_pred CCCEEEEeeeeecCCCCCCCCccchhHH---HHHHHHhcCCCCEEe--------cCCCc---eeeeeeeHHHHHHHHHHH
Confidence 899999999999999752 12211111 111111246544 45 56543 789999999999999999
Q ss_pred hcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccchhh
Q 042656 163 ATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCFEA 242 (289)
Q Consensus 163 a~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~f 242 (289)
+.++ .+++|||++|+..|+.|+...|++.+|... ... .|.+ .....
T Consensus 225 ~~~~--~~~~yni~~~~~~s~~el~~~i~~~~~~~~-~~~--~~~~-----------------------~~~~~------ 270 (308)
T PRK11150 225 WENG--VSGIFNCGTGRAESFQAVADAVLAYHKKGE-IEY--IPFP-----------------------DKLKG------ 270 (308)
T ss_pred HhcC--CCCeEEcCCCCceeHHHHHHHHHHHhCCCc-cee--ccCc-----------------------ccccc------
Confidence 8764 357999999999999999999999998531 100 1100 00000
Q ss_pred hhhhhcccccccccHHHHHhcCCCCC-cChHHHHHHHHHHHH
Q 042656 243 LNTVLHLQFQHVSSMNKSREFGFFGF-VDTMKSIRTWVKKLR 283 (289)
Q Consensus 243 ~d~~~~~~~~~~~d~~Kar~~Gw~~~-~dt~e~~~~~~~~lr 283 (289)
........|.+|+|++||+|+ .++++++.++++|+.
T Consensus 271 -----~~~~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 271 -----RYQAFTQADLTKLRAAGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred -----ccceecccCHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence 001145689999999999997 599999999999975
No 18
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.75 E-value=8.3e-17 Score=146.76 Aligned_cols=214 Identities=14% Similarity=0.150 Sum_probs=148.0
Q ss_pred cccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh---cCCC
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS---YSPA 86 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e---~~~g 86 (289)
+..+|......|+.++.+.++. +..+|. ++..++ ...||. ....|++|++|.. |...|.+.+...| ...+
T Consensus 66 ~~~~~~~~~~~n~~~~~~l~~~-~~~~~~-~~v~~Ss~~vy~~--~~~~~~~E~~~~~--~~~~Y~~~K~~~E~~~~~~~ 139 (287)
T TIGR01214 66 AESDPEKAFAVNALAPQNLARA-AARHGA-RLVHISTDYVFDG--EGKRPYREDDATN--PLNVYGQSKLAGEQAIRAAG 139 (287)
T ss_pred cccCHHHHHHHHHHHHHHHHHH-HHHcCC-eEEEEeeeeeecC--CCCCCCCCCCCCC--CcchhhHHHHHHHHHHHHhC
Confidence 3445677788999999999888 556664 555545 455654 3357899999865 4556887777776 3347
Q ss_pred ceEEEeccCceeecCC-CchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcC
Q 042656 87 VTYSVHRSSIIIGASS-RSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATT 165 (289)
Q Consensus 87 ~~~~ivRP~~V~G~~~-gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~ 165 (289)
..++++||+.|||+.. .++...+. -.+ ..+.+++. .|+ +.+++++++++|++++.++..
T Consensus 140 ~~~~ilR~~~v~G~~~~~~~~~~~~----~~~---~~~~~~~~--------~~~-----~~~~~v~v~Dva~a~~~~~~~ 199 (287)
T TIGR01214 140 PNALIVRTSWLYGGGGGRNFVRTML----RLA---GRGEELRV--------VDD-----QIGSPTYAKDLARVIAALLQR 199 (287)
T ss_pred CCeEEEEeeecccCCCCCCHHHHHH----HHh---hcCCCceE--------ecC-----CCcCCcCHHHHHHHHHHHHhh
Confidence 8999999999999985 34432211 111 24567777 554 456889999999999999988
Q ss_pred CCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccchhhhhh
Q 042656 166 DRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCFEALNT 245 (289)
Q Consensus 166 p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~f~d~ 245 (289)
+.+.+++|||++++.+|+.|++..+++.+|.+....+ .| ...... .. +. . .+.
T Consensus 200 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~--~~--~~~~~~--~~-------~~--~-~~~----------- 252 (287)
T TIGR01214 200 LARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLH--PQ--EVKPIS--SK-------EY--P-RPA----------- 252 (287)
T ss_pred ccCCCCeEEEECCCCcCHHHHHHHHHHHhCccccccc--Cc--eeEeec--HH-------Hc--C-CCC-----------
Confidence 7677899999999999999999999999998754321 11 000000 00 00 0 000
Q ss_pred hhcccccccccHHHHHhc-CCCCCcChHHHHHHHHH
Q 042656 246 VLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVK 280 (289)
Q Consensus 246 ~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~ 280 (289)
.......+|.+|+|+. || +..+.++++.++++
T Consensus 253 --~~~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~~ 285 (287)
T TIGR01214 253 --RRPAYSVLDNTKLVKTLGT-PLPHWREALRAYLQ 285 (287)
T ss_pred --CCCCccccchHHHHHHcCC-CCccHHHHHHHHHh
Confidence 1112567999999996 99 66799999998775
No 19
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.74 E-value=5.7e-17 Score=165.70 Aligned_cols=222 Identities=13% Similarity=0.104 Sum_probs=157.9
Q ss_pred cCcccccCCchhhccChHHHHHhhhhHhhhcc-Cceeeccc-ccccCccCC-CCCCCCCCCCCCCCCCChHH-----HHH
Q 042656 7 HYTGPISDPSLTVGASSRSLHNSLLPLAVHTN-ICKYQGLP-FRYFGQLIG-HDPPFKEDSVRLPFPNFYYA-----VED 78 (289)
Q Consensus 7 ~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG-~k~yg~~~-~~~~g~~~~-~~~P~~E~~pr~p~p~fyy~-----qEd 78 (289)
+++.+..+|.....+|+.++.+.++. +...| +|++..+| ...||.... ...+..|++|..| ...|. .|+
T Consensus 92 ~~~~~~~~~~~~~~~Nv~gt~~ll~a-~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p--~~~Y~~sK~~aE~ 168 (668)
T PLN02260 92 HVDNSFGNSFEFTKNNIYGTHVLLEA-CKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLP--TNPYSATKAGAEM 168 (668)
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHH-HHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCC--CCCcHHHHHHHHH
Confidence 34555667888889999999999998 55666 89998877 667875211 0123467777653 22244 455
Q ss_pred HHHh--cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHH
Q 042656 79 IAAS--YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLA 156 (289)
Q Consensus 79 ~L~e--~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la 156 (289)
.+.+ +..++.++++||+.|||+.... ..+.+..+..++ .|.++++ +|++. +.+++++++++|
T Consensus 169 ~v~~~~~~~~l~~vilR~~~VyGp~~~~--~~~i~~~~~~a~---~g~~i~i--------~g~g~---~~r~~ihV~Dva 232 (668)
T PLN02260 169 LVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAM---QGKPLPI--------HGDGS---NVRSYLYCEDVA 232 (668)
T ss_pred HHHHHHHHcCCCEEEECcccccCcCCCc--ccHHHHHHHHHh---CCCCeEE--------ecCCC---ceEeeEEHHHHH
Confidence 5554 3468999999999999997521 111222222222 6788988 77765 889999999999
Q ss_pred HHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccccc
Q 042656 157 EQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEE 236 (289)
Q Consensus 157 ~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~ 236 (289)
+++..++..+ ..+++|||++++.+|+.|+...|++.+|.+.... . ++.. ..++.
T Consensus 233 ~a~~~~l~~~-~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~---i-----~~~~----------------~~p~~- 286 (668)
T PLN02260 233 EAFEVVLHKG-EVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKS---I-----KFVE----------------NRPFN- 286 (668)
T ss_pred HHHHHHHhcC-CCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcce---e-----eecC----------------CCCCC-
Confidence 9999887654 4578999999999999999999999999753210 0 0000 01111
Q ss_pred ccchhhhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHHHHHCC
Q 042656 237 ITCFEALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKKLREMK 286 (289)
Q Consensus 237 l~~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~lr~~~ 286 (289)
+....+|++|++++||.|.++.+|++.++++||++.+
T Consensus 287 -------------~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~~ 323 (668)
T PLN02260 287 -------------DQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNP 323 (668)
T ss_pred -------------cceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhCh
Confidence 1145689999999999999999999999999999754
No 20
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.74 E-value=1.1e-16 Score=150.61 Aligned_cols=239 Identities=15% Similarity=0.095 Sum_probs=154.6
Q ss_pred ccCcccccCCchhhccChHHHHHhhhhHhhhccCc---eeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042656 6 IHYTGPISDPSLTVGASSRSLHNSLLPLAVHTNIC---KYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAA 81 (289)
Q Consensus 6 ~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k---~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~ 81 (289)
.++..+..+|...+.+|+.++.+.++. +...|++ ++..+| ...||. ....|.+|+.|.. |...|.+.|...
T Consensus 89 ~~~~~~~~~~~~~~~~n~~gt~~ll~a-~~~~~~~~~~~~v~~SS~~vyg~--~~~~~~~E~~~~~--p~~~Y~~sK~~~ 163 (343)
T TIGR01472 89 SHVKVSFEIPEYTADVDGIGTLRLLEA-VRTLGLIKSVKFYQASTSELYGK--VQEIPQNETTPFY--PRSPYAAAKLYA 163 (343)
T ss_pred cccchhhhChHHHHHHHHHHHHHHHHH-HHHhCCCcCeeEEEeccHHhhCC--CCCCCCCCCCCCC--CCChhHHHHHHH
Confidence 345566778888889999999999998 5567764 565545 567885 3356889998865 444577666655
Q ss_pred h-------cCCCceEEEeccCceeecCCC-chhhhHHHHHHHHHHHHHhCCC-eEEEeccccCCCCCcccccccccccch
Q 042656 82 S-------YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICRHQGLP-FRYLAIHGSSLSGNKYTWEHFCDMSDS 152 (289)
Q Consensus 82 e-------~~~g~~~~ivRP~~V~G~~~g-n~~nl~~~l~vyaal~~~~g~p-l~f~~~~~~~~pG~~~~~~~~~~~~~~ 152 (289)
| +..++..++.|+..+||+..+ ++.......++ ..+ ..|.+ ..+ .|++. +.+|++++
T Consensus 164 e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~-~~~--~~~~~~~~~--------~g~g~---~~rd~i~V 229 (343)
T TIGR01472 164 HWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAA-AKI--KLGLQEKLY--------LGNLD---AKRDWGHA 229 (343)
T ss_pred HHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHH-HHH--HcCCCCcee--------eCCCc---cccCceeH
Confidence 5 235788899999999999753 32211111111 111 24553 334 45554 89999999
Q ss_pred HHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcc
Q 042656 153 RVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKT 232 (289)
Q Consensus 153 ~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~ 232 (289)
+++|++++.++.++. ++.|||++|+.+|++|+...|++.+|.+...- ..++.-..+....... .-. +.+.
T Consensus 230 ~D~a~a~~~~~~~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~----~~~--~~~~ 299 (343)
T TIGR01472 230 KDYVEAMWLMLQQDK--PDDYVIATGETHSVREFVEVSFEYIGKTLNWK--DKGINEVGRCKETGKV----HVE--IDPR 299 (343)
T ss_pred HHHHHHHHHHHhcCC--CccEEecCCCceeHHHHHHHHHHHcCCCcccc--cccccccccccccCce----eEE--eCcc
Confidence 999999999998763 46899999999999999999999999753210 0000000000000000 000 0000
Q ss_pred ccccccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHH
Q 042656 233 KMEEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLRE 284 (289)
Q Consensus 233 ~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~ 284 (289)
.... +.......|++|+++. ||.|.+++.|+++++++++++
T Consensus 300 ~~~~-----------~~~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 300 YFRP-----------TEVDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred ccCC-----------CccchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 0000 1112346799999995 999999999999999998875
No 21
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.74 E-value=1e-16 Score=149.14 Aligned_cols=220 Identities=17% Similarity=0.168 Sum_probs=145.7
Q ss_pred cccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccC---CCCCCCCCCCCCCCC----CCChHHHHHHH
Q 042656 9 TGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLI---GHDPPFKEDSVRLPF----PNFYYAVEDIA 80 (289)
Q Consensus 9 ~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~---~~~~P~~E~~pr~p~----p~fyy~qEd~L 80 (289)
..+..++...+.+|+.++.+.++.+.-..+.+++..++ ...++... ....|++|++|..|. |...|...|..
T Consensus 91 ~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~ 170 (325)
T PLN02989 91 TVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTL 170 (325)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHH
Confidence 34455667888999999999999844333567776655 33333210 013467999886642 23346554444
Q ss_pred Hh-------cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchH
Q 042656 81 AS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSR 153 (289)
Q Consensus 81 ~e-------~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~ 153 (289)
.| +..+++++++||+.|||+......+.... ....+ ..|.+ ++ . . ..+++++++
T Consensus 171 ~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~--~i~~~--~~~~~-~~--------~-~-----~~r~~i~v~ 231 (325)
T PLN02989 171 AEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVA--VIVEL--MKGKN-PF--------N-T-----THHRFVDVR 231 (325)
T ss_pred HHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHH--HHHHH--HcCCC-CC--------C-C-----cCcCeeEHH
Confidence 44 34689999999999999975322222111 11112 13433 23 1 1 347899999
Q ss_pred HHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccc
Q 042656 154 VLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTK 233 (289)
Q Consensus 154 ~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~ 233 (289)
++|++++++++++.+ ++.||+ +|+.+|+++++..|++.++...... .+ ..
T Consensus 232 Dva~a~~~~l~~~~~-~~~~ni-~~~~~s~~ei~~~i~~~~~~~~~~~---~~-------------------------~~ 281 (325)
T PLN02989 232 DVALAHVKALETPSA-NGRYII-DGPVVTIKDIENVLREFFPDLCIAD---RN-------------------------ED 281 (325)
T ss_pred HHHHHHHHHhcCccc-CceEEE-ecCCCCHHHHHHHHHHHCCCCCCCC---CC-------------------------CC
Confidence 999999999988754 568999 5678999999999999997421110 00 00
Q ss_pred cccccchhhhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHHHHHCCCC
Q 042656 234 MEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKKLREMKII 288 (289)
Q Consensus 234 l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~lr~~~ii 288 (289)
... ........|.+|+|++||+|.++++|++.++++|+++.|.+
T Consensus 282 ~~~-----------~~~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~~~~~ 325 (325)
T PLN02989 282 ITE-----------LNSVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEKCLV 325 (325)
T ss_pred ccc-----------ccccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 000 11225688999999999999999999999999999988763
No 22
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.73 E-value=1.3e-16 Score=147.94 Aligned_cols=224 Identities=11% Similarity=0.069 Sum_probs=148.3
Q ss_pred cccCcccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-
Q 042656 5 EIHYTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS- 82 (289)
Q Consensus 5 ~~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e- 82 (289)
..++..+..+|.....+|+.++.+.++. +...|. ++..+| ..+||. ....|++|++|.. |...|.+.|...|
T Consensus 64 ~~~~~~~~~~~~~~~~~N~~~~~~l~~a-a~~~g~-~~v~~Ss~~Vy~~--~~~~p~~E~~~~~--P~~~Yg~sK~~~E~ 137 (299)
T PRK09987 64 HTAVDKAESEPEFAQLLNATSVEAIAKA-ANEVGA-WVVHYSTDYVFPG--TGDIPWQETDATA--PLNVYGETKLAGEK 137 (299)
T ss_pred cCCcchhhcCHHHHHHHHHHHHHHHHHH-HHHcCC-eEEEEccceEECC--CCCCCcCCCCCCC--CCCHHHHHHHHHHH
Confidence 3456667788988899999999999988 666785 466656 567765 3356999999855 5566888777777
Q ss_pred --cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHH
Q 042656 83 --YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQI 160 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i 160 (289)
......++|+||++|||+...++...+.. .+ ..|.++++ .|+.. ....++...++.+++++.
T Consensus 138 ~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~-----~~--~~~~~~~v--------~~d~~-g~~~~~~~~~d~~~~~~~ 201 (299)
T PRK09987 138 ALQEHCAKHLIFRTSWVYAGKGNNFAKTMLR-----LA--KEREELSV--------INDQF-GAPTGAELLADCTAHAIR 201 (299)
T ss_pred HHHHhCCCEEEEecceecCCCCCCHHHHHHH-----HH--hcCCCeEE--------eCCCc-CCCCCHHHHHHHHHHHHH
Confidence 22345679999999999975454322211 11 24778887 66521 123333344666777777
Q ss_pred HHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCC--CCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccccccc
Q 042656 161 WAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVP--FDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEIT 238 (289)
Q Consensus 161 ~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~--~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~ 238 (289)
.++..+. .+++||+++++.+||.|+...|++.++..+.. +..-.+.+...+ . .+.
T Consensus 202 ~~~~~~~-~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~-~-----------------~~~---- 258 (299)
T PRK09987 202 VALNKPE-VAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAY-P-----------------TPA---- 258 (299)
T ss_pred HhhccCC-CCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhc-C-----------------CCC----
Confidence 6665443 34699999999999999999998865432111 000011111100 0 000
Q ss_pred chhhhhhhhcccccccccHHHHHh-cCCCCCcChHHHHHHHHHHHH
Q 042656 239 CFEALNTVLHLQFQHVSSMNKSRE-FGFFGFVDTMKSIRTWVKKLR 283 (289)
Q Consensus 239 ~w~f~d~~~~~~~~~~~d~~Kar~-~Gw~~~~dt~e~~~~~~~~lr 283 (289)
.+..+..+|.+|+++ +||.+. +.++++.+++++|.
T Consensus 259 ---------~rp~~~~ld~~k~~~~lg~~~~-~~~~~l~~~~~~~~ 294 (299)
T PRK09987 259 ---------RRPHNSRLNTEKFQQNFALVLP-DWQVGVKRMLTELF 294 (299)
T ss_pred ---------CCCCcccCCHHHHHHHhCCCCc-cHHHHHHHHHHHHh
Confidence 133467899999999 599974 99999999998764
No 23
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.73 E-value=2.6e-16 Score=145.32 Aligned_cols=241 Identities=14% Similarity=0.086 Sum_probs=156.3
Q ss_pred cccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCC-CCChHHHHHHHHh------
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPF-PNFYYAVEDIAAS------ 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~-p~fyy~qEd~L~e------ 82 (289)
+..+|......|+.++.+.++. +...|+|++..++ ...||.. ....|++|+.|..|. +..+|.+.+...|
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~v~~SS~~~~~~~-~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 155 (328)
T TIGR03466 78 WAPDPEEMYAANVEGTRNLLRA-ALEAGVERVVYTSSVATLGVR-GDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEM 155 (328)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH-HHHhCCCeEEEEechhhcCcC-CCCCCcCccCCCCcccccChHHHHHHHHHHHHHHH
Confidence 3456777888999999998888 5577888888766 4556631 235688999887653 2446765555444
Q ss_pred -cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHH
Q 042656 83 -YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIW 161 (289)
Q Consensus 83 -~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~ 161 (289)
...++.++++||+.|||+.......... + +...+ ..+.| .+ ++ ...++++++++|++++.
T Consensus 156 ~~~~~~~~~ilR~~~~~G~~~~~~~~~~~-~-~~~~~--~~~~~-~~--------~~------~~~~~i~v~D~a~a~~~ 216 (328)
T TIGR03466 156 AAEKGLPVVIVNPSTPIGPRDIKPTPTGR-I-IVDFL--NGKMP-AY--------VD------TGLNLVHVDDVAEGHLL 216 (328)
T ss_pred HHhcCCCEEEEeCCccCCCCCCCCCcHHH-H-HHHHH--cCCCc-ee--------eC------CCcceEEHHHHHHHHHH
Confidence 2358999999999999997532211111 1 01111 12222 23 22 23478899999999999
Q ss_pred HhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccchh
Q 042656 162 AATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCFE 241 (289)
Q Consensus 162 aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~ 241 (289)
++.++ ..|+.||++ |+.+|++|++..|++.+|.+..... .|..+...+....+.|.++ .+.. +.+.. .
T Consensus 217 ~~~~~-~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~-~--- 284 (328)
T TIGR03466 217 ALERG-RIGERYILG-GENLTLKQILDKLAEITGRPAPRVK--LPRWLLLPVAWGAEALARL---TGKE-PRVTV-D--- 284 (328)
T ss_pred HHhCC-CCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCc--CCHHHHHHHHHHHHHHHHh---cCCC-CCCCH-H---
Confidence 98875 468899986 7899999999999999998754321 4433333222222233322 1211 11100 0
Q ss_pred hhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHHCCCC
Q 042656 242 ALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLREMKII 288 (289)
Q Consensus 242 f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~~~ii 288 (289)
-++. ...+..+|++|+++. ||+|. ++.+++.++++||++.+.+
T Consensus 285 ~~~~---~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~~ 328 (328)
T TIGR03466 285 GVRM---AKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANGYL 328 (328)
T ss_pred HHHH---HhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhCCC
Confidence 0111 123678999999885 99995 9999999999999987753
No 24
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.73 E-value=2.1e-16 Score=147.50 Aligned_cols=221 Identities=11% Similarity=0.010 Sum_probs=148.4
Q ss_pred cccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHH-----HHHHHh--
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAV-----EDIAAS-- 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~q-----Ed~L~e-- 82 (289)
+..+|...+.+|+.++.+.++. +...|+|++..++ ...||. ....|++|++|.. .|...|.. |+.+.+
T Consensus 89 ~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~v~~Ss~~~yg~--~~~~~~~E~~~~~-~p~~~Y~~sK~~~E~~~~~~~ 164 (338)
T PRK10675 89 SVQKPLEYYDNNVNGTLRLISA-MRAANVKNLIFSSSATVYGD--QPKIPYVESFPTG-TPQSPYGKSKLMVEQILTDLQ 164 (338)
T ss_pred hhhCHHHHHHHHHHHHHHHHHH-HHHcCCCEEEEeccHHhhCC--CCCCccccccCCC-CCCChhHHHHHHHHHHHHHHH
Confidence 4456777888999999999987 5577888887656 556775 3457899999852 24455665 444444
Q ss_pred c-CCCceEEEeccCceeecCCCch---------hhhHHHHHHHHHHHHHhCCCeEEEeccccCCC-CCcccccccccccc
Q 042656 83 Y-SPAVTYSVHRSSIIIGASSRSL---------NNSLLTLAVYATICRHQGLPFRYLAIHGSSLS-GNKYTWEHFCDMSD 151 (289)
Q Consensus 83 ~-~~g~~~~ivRP~~V~G~~~gn~---------~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~p-G~~~~~~~~~~~~~ 151 (289)
+ ..++.++++|++.|||+.++.. .++...+ ..+......++.. ++...| +++ .+.+|+++
T Consensus 165 ~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~g---~~~~~~v~ 235 (338)
T PRK10675 165 KAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYI---AQVAVGRRDSLAI---FGNDYPTEDG---TGVRDYIH 235 (338)
T ss_pred HhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHH---HHHHhcCCCceEE---eCCcCCCCCC---cEEEeeEE
Confidence 1 2479999999999999854221 1221111 1111111122333 000001 122 37899999
Q ss_pred hHHHHHHHHHHhcCC--CcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCC
Q 042656 152 SRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGL 229 (289)
Q Consensus 152 ~~~la~~~i~aa~~p--~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl 229 (289)
++++|++++.|++++ ...+++|||++|+.+|++|+...|++.+|.+...-. .|.
T Consensus 236 v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~---------------------- 291 (338)
T PRK10675 236 VMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHF--APR---------------------- 291 (338)
T ss_pred HHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeee--CCC----------------------
Confidence 999999999999753 234699999999999999999999999997643200 010
Q ss_pred CccccccccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHH
Q 042656 230 YKTKMEEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLRE 284 (289)
Q Consensus 230 ~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~ 284 (289)
.... .....+|.+|+++. ||+|..++.+++.++++|+++
T Consensus 292 ---~~~~-------------~~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~ 331 (338)
T PRK10675 292 ---REGD-------------LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSR 331 (338)
T ss_pred ---CCCc-------------hhhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHh
Confidence 0000 11345789999985 999999999999999999987
No 25
>PLN02214 cinnamoyl-CoA reductase
Probab=99.73 E-value=1.8e-16 Score=149.61 Aligned_cols=216 Identities=14% Similarity=0.091 Sum_probs=146.2
Q ss_pred cCCchhhccChHHHHHhhhhHhhhccCceeecccc--cccCccCC-CCCCCCCCCCCC---C-CCCChHHHHHHHHh---
Q 042656 13 SDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLPF--RYFGQLIG-HDPPFKEDSVRL---P-FPNFYYAVEDIAAS--- 82 (289)
Q Consensus 13 ~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~--~~~g~~~~-~~~P~~E~~pr~---p-~p~fyy~qEd~L~e--- 82 (289)
.+|...+.+|+.++.+.|+. +...|+|+.+.++. ..||.... ...+++|+++.. + .|...|...|...|
T Consensus 94 ~~~~~~~~~nv~gt~~ll~a-a~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~ 172 (342)
T PLN02214 94 DDPEQMVEPAVNGAKFVINA-AAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAA 172 (342)
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHH
Confidence 46778889999999999998 56778888877662 46664111 123578886321 1 24455776555555
Q ss_pred ----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHH
Q 042656 83 ----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQ 158 (289)
Q Consensus 83 ----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~ 158 (289)
+..++.++++||+.|||+......+... ..+... -.|....+ |+ ..+|+++++++|++
T Consensus 173 ~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~-~~~~~~---~~g~~~~~---------~~-----~~~~~i~V~Dva~a 234 (342)
T PLN02214 173 WETAKEKGVDLVVLNPVLVLGPPLQPTINASL-YHVLKY---LTGSAKTY---------AN-----LTQAYVDVRDVALA 234 (342)
T ss_pred HHHHHHcCCcEEEEeCCceECCCCCCCCCchH-HHHHHH---HcCCcccC---------CC-----CCcCeeEHHHHHHH
Confidence 3468999999999999997531111110 011111 13444333 22 46789999999999
Q ss_pred HHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccccccc
Q 042656 159 QIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEIT 238 (289)
Q Consensus 159 ~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~ 238 (289)
++.|++++.+ ++.||+++ +..|++++...|++.++-. . .|.... . ...
T Consensus 235 ~~~al~~~~~-~g~yn~~~-~~~~~~el~~~i~~~~~~~-~-----~~~~~~---~-----------------~~~---- 282 (342)
T PLN02214 235 HVLVYEAPSA-SGRYLLAE-SARHRGEVVEILAKLFPEY-P-----LPTKCK---D-----------------EKN---- 282 (342)
T ss_pred HHHHHhCccc-CCcEEEec-CCCCHHHHHHHHHHHCCCC-C-----CCCCCc---c-----------------ccC----
Confidence 9999988754 45899997 4689999999999998521 1 111100 0 000
Q ss_pred chhhhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHHHHHCCCCC
Q 042656 239 CFEALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKKLREMKIIP 289 (289)
Q Consensus 239 ~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~lr~~~iiP 289 (289)
.......+|.+|++++||+| .+.+|++.++++||++.++||
T Consensus 283 ---------~~~~~~~~d~~k~~~LG~~p-~~lee~i~~~~~~~~~~~~~~ 323 (342)
T PLN02214 283 ---------PRAKPYKFTNQKIKDLGLEF-TSTKQSLYDTVKSLQEKGHLA 323 (342)
T ss_pred ---------CCCCccccCcHHHHHcCCcc-cCHHHHHHHHHHHHHHcCCCC
Confidence 01113457899999999999 699999999999999999886
No 26
>PLN02240 UDP-glucose 4-epimerase
Probab=99.73 E-value=2.5e-16 Score=147.75 Aligned_cols=222 Identities=14% Similarity=0.023 Sum_probs=152.0
Q ss_pred ccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh------
Q 042656 10 GPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS------ 82 (289)
Q Consensus 10 ~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e------ 82 (289)
.+..+|...+.+|+.++.+.++. +...|+|++..++ ...||. ....|++|++|..| ...|...+...|
T Consensus 96 ~~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~v~~Ss~~vyg~--~~~~~~~E~~~~~~--~~~Y~~sK~~~e~~~~~~ 170 (352)
T PLN02240 96 ESVAKPLLYYDNNLVGTINLLEV-MAKHGCKKLVFSSSATVYGQ--PEEVPCTEEFPLSA--TNPYGRTKLFIEEICRDI 170 (352)
T ss_pred ccccCHHHHHHHHHHHHHHHHHH-HHHcCCCEEEEEccHHHhCC--CCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHH
Confidence 34567888899999999999987 5567888888766 456765 34578999998763 344665444444
Q ss_pred --cCCCceEEEeccCceeecCCC--------chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCc---ccccccccc
Q 042656 83 --YSPAVTYSVHRSSIIIGASSR--------SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNK---YTWEHFCDM 149 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V~G~~~g--------n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~---~~~~~~~~~ 149 (289)
...++..+++|++.|||+.+. ...+.+... ...+......++++ .|+. ....+.+++
T Consensus 171 ~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~--------~g~~~~~~~g~~~~~~ 240 (352)
T PLN02240 171 HASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPY--VQQVAVGRRPELTV--------FGNDYPTKDGTGVRDY 240 (352)
T ss_pred HHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHH--HHHHHhCCCCceEE--------eCCCCCCCCCCEEEee
Confidence 235789999999999997431 111111111 11121111224444 3311 112489999
Q ss_pred cchHHHHHHHHHHhcCC----CcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHH
Q 042656 150 SDSRVLAEQQIWAATTD----RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVE 225 (289)
Q Consensus 150 ~~~~~la~~~i~aa~~p----~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~ 225 (289)
++++++|+++++|+.+. ...+++|||++|+.+|++|+...|++.+|.+..... .+
T Consensus 241 i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~--~~------------------- 299 (352)
T PLN02240 241 IHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKL--AP------------------- 299 (352)
T ss_pred EEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCcee--CC-------------------
Confidence 99999999999988643 344699999999999999999999999997533200 00
Q ss_pred HhCCCccccccccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHHCC
Q 042656 226 KHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLREMK 286 (289)
Q Consensus 226 k~gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~~~ 286 (289)
.... .......|++|+++. ||+|.+++.+++.++++|+++.+
T Consensus 300 ------~~~~-------------~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~ 342 (352)
T PLN02240 300 ------RRPG-------------DAEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNP 342 (352)
T ss_pred ------CCCC-------------ChhhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence 0000 011445789999995 99999999999999999998864
No 27
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.72 E-value=2.5e-16 Score=150.43 Aligned_cols=215 Identities=11% Similarity=0.037 Sum_probs=151.3
Q ss_pred cCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCC--CCCCCCCCCCCCCCCCChHHHHHHHHh-------
Q 042656 13 SDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIG--HDPPFKEDSVRLPFPNFYYAVEDIAAS------- 82 (289)
Q Consensus 13 ~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~--~~~P~~E~~pr~p~p~fyy~qEd~L~e------- 82 (289)
.+|......|+.++.+.++. +...|+|++..+| ...||+... ...|+.|+++....|..-|.+.+...|
T Consensus 104 ~~~~~~~~~N~~~t~nll~a-a~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~ 182 (370)
T PLN02695 104 SNHSVIMYNNTMISFNMLEA-ARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYT 182 (370)
T ss_pred cCchhhHHHHHHHHHHHHHH-HHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 45666778899999999997 5678999998766 557775211 123688876432345556776665555
Q ss_pred cCCCceEEEeccCceeecCCC-ch-hhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHH
Q 042656 83 YSPAVTYSVHRSSIIIGASSR-SL-NNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQI 160 (289)
Q Consensus 83 ~~~g~~~~ivRP~~V~G~~~g-n~-~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i 160 (289)
+..++.++++||+.|||+... +. ...+....+..++ ..+.++++ +|++. +.+|+++++++++++.
T Consensus 183 ~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~--~~~~~i~~--------~g~g~---~~r~~i~v~D~a~ai~ 249 (370)
T PLN02695 183 KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAL--TSTDEFEM--------WGDGK---QTRSFTFIDECVEGVL 249 (370)
T ss_pred HHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHH--cCCCCeEE--------eCCCC---eEEeEEeHHHHHHHHH
Confidence 346899999999999999641 11 1111111122222 23578888 77765 8899999999999999
Q ss_pred HHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccch
Q 042656 161 WAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCF 240 (289)
Q Consensus 161 ~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w 240 (289)
+++..+ .+++|||++|+.+|++++...|++.+|.+..... .| .+. .
T Consensus 250 ~~~~~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~--~~-------------------------~~~-~---- 295 (370)
T PLN02695 250 RLTKSD--FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKH--IP-------------------------GPE-G---- 295 (370)
T ss_pred HHHhcc--CCCceEecCCCceeHHHHHHHHHHHhCCCCCcee--cC-------------------------CCC-C----
Confidence 987664 3689999999999999999999999987532100 00 000 0
Q ss_pred hhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHH
Q 042656 241 EALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLRE 284 (289)
Q Consensus 241 ~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~ 284 (289)
......|++|+++. ||.|.+++++++.++++|+++
T Consensus 296 ---------~~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~ 331 (370)
T PLN02695 296 ---------VRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKE 331 (370)
T ss_pred ---------ccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 01235799999985 999999999999999999875
No 28
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.72 E-value=3e-16 Score=142.87 Aligned_cols=220 Identities=16% Similarity=0.107 Sum_probs=172.3
Q ss_pred ccccCcccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCC--C-CCCChHHHHHH
Q 042656 4 CEIHYTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRL--P-FPNFYYAVEDI 79 (289)
Q Consensus 4 ~~~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~--p-~p~fyy~qEd~ 79 (289)
|..|-......|+.++.+|+.++.++|.- +-.-| |++..+| .++||+ +...|..|+---. | .|..-|+.++.
T Consensus 100 apasp~~y~~npvktIktN~igtln~lgl-akrv~-aR~l~aSTseVYgd--p~~hpq~e~ywg~vnpigpr~cydegKr 175 (350)
T KOG1429|consen 100 APASPPHYKYNPVKTIKTNVIGTLNMLGL-AKRVG-ARFLLASTSEVYGD--PLVHPQVETYWGNVNPIGPRSCYDEGKR 175 (350)
T ss_pred cCCCCcccccCccceeeecchhhHHHHHH-HHHhC-ceEEEeecccccCC--cccCCCccccccccCcCCchhhhhHHHH
Confidence 45567778899999999999999999987 44445 7777667 889998 7788888887543 3 55677998888
Q ss_pred HHh-------cCCCceEEEeccCceeecCCC-chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccc
Q 042656 80 AAS-------YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSD 151 (289)
Q Consensus 80 L~e-------~~~g~~~~ivRP~~V~G~~~g-n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~ 151 (289)
++| ++.|.++.|.|++++|||.-. +- ..+.+-++-.++ ++.||.. .|++. +.|+|+|
T Consensus 176 ~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~d-grvvsnf~~q~l---r~epltv--------~g~G~---qtRSF~y 240 (350)
T KOG1429|consen 176 VAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDD-GRVVSNFIAQAL---RGEPLTV--------YGDGK---QTRSFQY 240 (350)
T ss_pred HHHHHHHHhhcccCcEEEEEeeecccCCccccCC-ChhhHHHHHHHh---cCCCeEE--------EcCCc---ceEEEEe
Confidence 888 567999999999999999521 11 344455555555 7899999 88886 9999999
Q ss_pred hHHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCc
Q 042656 152 SRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYK 231 (289)
Q Consensus 152 ~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~ 231 (289)
++.+++.++....++...+ |||.|.+.+|..||-+.+-+..|-.... ++..
T Consensus 241 vsD~Vegll~Lm~s~~~~p--vNiGnp~e~Tm~elAemv~~~~~~~s~i----------~~~~----------------- 291 (350)
T KOG1429|consen 241 VSDLVEGLLRLMESDYRGP--VNIGNPGEFTMLELAEMVKELIGPVSEI----------EFVE----------------- 291 (350)
T ss_pred HHHHHHHHHHHhcCCCcCC--cccCCccceeHHHHHHHHHHHcCCCcce----------eecC-----------------
Confidence 9999999999888875544 9999999999999999998877443322 1111
Q ss_pred cccccccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHH
Q 042656 232 TKMEEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLRE 284 (289)
Q Consensus 232 ~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~ 284 (289)
+-.+ +...+..|++||++. ||.|.+.++|+|..++.++|+
T Consensus 292 ~~~D-------------dp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~ 332 (350)
T KOG1429|consen 292 NGPD-------------DPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRE 332 (350)
T ss_pred CCCC-------------CccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHH
Confidence 1111 233678999999996 999999999999999999886
No 29
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.71 E-value=6.7e-16 Score=141.56 Aligned_cols=216 Identities=13% Similarity=0.106 Sum_probs=151.0
Q ss_pred cccccCCchhhccChHHHHHhhhhHhhhccCc-eeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh----
Q 042656 9 TGPISDPSLTVGASSRSLHNSLLPLAVHTNIC-KYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS---- 82 (289)
Q Consensus 9 ~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k-~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e---- 82 (289)
..+..+|...+.+|+.++.+.++. +...+.+ ++..++ ...||.. ....|..|++|.. |...|.+.+...|
T Consensus 87 ~~~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~~i~~Ss~~v~g~~-~~~~~~~e~~~~~--~~~~Y~~sK~~~e~~~~ 162 (317)
T TIGR01181 87 DRSISGPAAFIETNVVGTYTLLEA-VRKYWHEFRFHHISTDEVYGDL-EKGDAFTETTPLA--PSSPYSASKAASDHLVR 162 (317)
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHH-HHhcCCCceEEEeeccceeCCC-CCCCCcCCCCCCC--CCCchHHHHHHHHHHHH
Confidence 345567778889999999999987 4444333 566555 4566652 1123788988765 4444665444444
Q ss_pred ---cCCCceEEEeccCceeecCC--CchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHH
Q 042656 83 ---YSPAVTYSVHRSSIIIGASS--RSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAE 157 (289)
Q Consensus 83 ---~~~g~~~~ivRP~~V~G~~~--gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~ 157 (289)
...+++++++||+.|||+.. ..+.... +..+ ..|.++++ .|++. +.+++++++++|+
T Consensus 163 ~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~----~~~~---~~~~~~~~--------~~~g~---~~~~~i~v~D~a~ 224 (317)
T TIGR01181 163 AYHRTYGLPALITRCSNNYGPYQFPEKLIPLM----ITNA---LAGKPLPV--------YGDGQ---QVRDWLYVEDHCR 224 (317)
T ss_pred HHHHHhCCCeEEEEeccccCCCCCcccHHHHH----HHHH---hcCCCceE--------eCCCc---eEEeeEEHHHHHH
Confidence 34689999999999999964 2222211 1111 25778888 77664 7889999999999
Q ss_pred HHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccc
Q 042656 158 QQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEI 237 (289)
Q Consensus 158 ~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l 237 (289)
++..++.++ ..+++||+++++.+|+.++.+.|++.+|.+.... .+.. ...
T Consensus 225 ~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~---------~~~~-----------------~~~--- 274 (317)
T TIGR01181 225 AIYLVLEKG-RVGETYNIGGGNERTNLEVVETILELLGKDEDLI---------THVE-----------------DRP--- 274 (317)
T ss_pred HHHHHHcCC-CCCceEEeCCCCceeHHHHHHHHHHHhCCCcccc---------cccC-----------------CCc---
Confidence 999888754 4679999999999999999999999999642211 0000 000
Q ss_pred cchhhhhhhhcccccccccHHHHHh-cCCCCCcChHHHHHHHHHHHHHCC
Q 042656 238 TCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFVDTMKSIRTWVKKLREMK 286 (289)
Q Consensus 238 ~~w~f~d~~~~~~~~~~~d~~Kar~-~Gw~~~~dt~e~~~~~~~~lr~~~ 286 (289)
........|.+|+++ +||.|.+++.+++.+++++|++.+
T Consensus 275 ----------~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~ 314 (317)
T TIGR01181 275 ----------GHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNE 314 (317)
T ss_pred ----------cchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence 011134578999987 599999999999999999998764
No 30
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.71 E-value=9e-16 Score=144.75 Aligned_cols=221 Identities=12% Similarity=0.011 Sum_probs=150.2
Q ss_pred cCcccccCCchhhccChHHHHHhhhhHhhhcc-Cceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHH-----HHH
Q 042656 7 HYTGPISDPSLTVGASSRSLHNSLLPLAVHTN-ICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAV-----EDI 79 (289)
Q Consensus 7 ~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG-~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~q-----Ed~ 79 (289)
.+..+..+|...+.+|+.++.+.++.+. ..| .|++..++ ...||.. ....|++|++|..| ...|.. |..
T Consensus 87 ~~~~~~~~~~~~~~~N~~g~~~ll~a~~-~~~~~~~iv~~SS~~vyg~~-~~~~~~~e~~~~~p--~~~Y~~sK~~~e~~ 162 (349)
T TIGR02622 87 LVRKSYADPLETFETNVMGTVNLLEAIR-AIGSVKAVVNVTSDKCYRND-EWVWGYRETDPLGG--HDPYSSSKACAELV 162 (349)
T ss_pred ccccchhCHHHHHHHhHHHHHHHHHHHH-hcCCCCEEEEEechhhhCCC-CCCCCCccCCCCCC--CCcchhHHHHHHHH
Confidence 4556777899999999999999999854 445 67777656 4567641 12357888887553 222554 444
Q ss_pred HHh--cC-------CCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCccccccccccc
Q 042656 80 AAS--YS-------PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMS 150 (289)
Q Consensus 80 L~e--~~-------~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~ 150 (289)
+.. +. +++.++++||+.|||++....-+ +.+..+..++ .|.++++ ++. .+.+|++
T Consensus 163 ~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~-~~~~~~~~~~---~g~~~~~--------~~g----~~~rd~i 226 (349)
T TIGR02622 163 IASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDR-LIPDVIRAFS---SNKIVII--------RNP----DATRPWQ 226 (349)
T ss_pred HHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhh-hhHHHHHHHh---cCCCeEE--------CCC----Cccccee
Confidence 433 11 38999999999999996411111 1121122222 5788888 432 3889999
Q ss_pred chHHHHHHHHHHhcC----CCcCCCeeEecCC--CccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHH
Q 042656 151 DSRVLAEQQIWAATT----DRAKNQAFNCTNG--DVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIV 224 (289)
Q Consensus 151 ~~~~la~~~i~aa~~----p~a~ge~FNi~dg--~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~ 224 (289)
+++++|++++.++.. +...+++|||+.| +..|..++...+++.++.....+. .+ .
T Consensus 227 ~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~--~~-------~---------- 287 (349)
T TIGR02622 227 HVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWE--DD-------S---------- 287 (349)
T ss_pred eHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCcee--ec-------c----------
Confidence 999999999988753 2234789999965 799999999999998874321110 00 0
Q ss_pred HHhCCCccccccccchhhhhhhhcccccccccHHHHHh-cCCCCCcChHHHHHHHHHHHHH
Q 042656 225 EKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFVDTMKSIRTWVKKLRE 284 (289)
Q Consensus 225 ~k~gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~-~Gw~~~~dt~e~~~~~~~~lr~ 284 (289)
.+... .......+|++|+++ +||+|.+++.+++.++++|+++
T Consensus 288 -------~~~~~-----------~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~ 330 (349)
T TIGR02622 288 -------DLNHP-----------HEARLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKA 330 (349)
T ss_pred -------CCCCC-----------cccceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 00000 011246789999999 5999999999999999999875
No 31
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.68 E-value=2.3e-15 Score=138.62 Aligned_cols=217 Identities=12% Similarity=0.095 Sum_probs=146.9
Q ss_pred cccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS------- 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e------- 82 (289)
+..+|.....+|+.++.+.++. +.+.|+ ++..+| ...||. . ..|++|+++.. .|...|.+.+...|
T Consensus 80 ~~~~~~~~~~~n~~~~~~ll~~-~~~~~~-~~v~~SS~~vy~~--~-~~~~~e~~~~~-~p~~~Y~~sK~~~e~~~~~~~ 153 (314)
T TIGR02197 80 TETDGEYMMENNYQYSKRLLDW-CAEKGI-PFIYASSAATYGD--G-EAGFREGRELE-RPLNVYGYSKFLFDQYVRRRV 153 (314)
T ss_pred cccchHHHHHHHHHHHHHHHHH-HHHhCC-cEEEEccHHhcCC--C-CCCcccccCcC-CCCCHHHHHHHHHHHHHHHHh
Confidence 3467888889999999999998 556775 566655 556775 2 45778877632 24445765444443
Q ss_pred --cCCCceEEEeccCceeecCCC--ch-hhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcc---cccccccccchHH
Q 042656 83 --YSPAVTYSVHRSSIIIGASSR--SL-NNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKY---TWEHFCDMSDSRV 154 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V~G~~~g--n~-~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~---~~~~~~~~~~~~~ 154 (289)
...++.++++||+.|||+... .. .+++..+ ... ...+.++.. .|... ...+.++++++++
T Consensus 154 ~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~--------~~~~~~~~~g~~~~~~i~v~D 221 (314)
T TIGR02197 154 LPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHL--FNQ--IKAGGNVKL--------FKSSEGFKDGEQLRDFVYVKD 221 (314)
T ss_pred HhhccCCceEEEEEeeccCCCCCCCCCcccHHHHH--HHH--HhcCCCeEE--------ecCccccCCCCceeeeEEHHH
Confidence 134679999999999999742 11 1222111 111 124555554 33211 1248899999999
Q ss_pred HHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccc
Q 042656 155 LAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKM 234 (289)
Q Consensus 155 la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l 234 (289)
+|+++..++.. ..+++|||++++++|++|+...|++.+|.+..... .|.+- ...
T Consensus 222 ~a~~i~~~~~~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~~~----------------------~~~ 275 (314)
T TIGR02197 222 VVDVNLWLLEN--GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEY--IPMPE----------------------ALR 275 (314)
T ss_pred HHHHHHHHHhc--ccCceEEcCCCCCccHHHHHHHHHHHhCCCCccee--ccCcc----------------------ccc
Confidence 99999998876 45679999999999999999999999997642100 11100 000
Q ss_pred ccccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHH
Q 042656 235 EEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLR 283 (289)
Q Consensus 235 ~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr 283 (289)
.. ......+|.+|+|+. ||.|..++.|++.++++|++
T Consensus 276 ~~------------~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 276 GK------------YQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL 313 (314)
T ss_pred cc------------cccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence 00 011356899999997 99999999999999999985
No 32
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.67 E-value=4.9e-15 Score=136.23 Aligned_cols=220 Identities=16% Similarity=0.100 Sum_probs=149.4
Q ss_pred cccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHH-----HHHHHh
Q 042656 9 TGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAV-----EDIAAS 82 (289)
Q Consensus 9 ~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~q-----Ed~L~e 82 (289)
..+..++...+..|+.++.+.++. +...|.+++..++ ...||. ....|++|++|.. |...|.+ |..+.+
T Consensus 84 ~~~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~v~~ss~~~~g~--~~~~~~~e~~~~~--~~~~y~~sK~~~e~~~~~ 158 (328)
T TIGR01179 84 GESVQDPLKYYRNNVVNTLNLLEA-MQQTGVKKFIFSSSAAVYGE--PSSIPISEDSPLG--PINPYGRSKLMSERILRD 158 (328)
T ss_pred chhhcCchhhhhhhHHHHHHHHHH-HHhcCCCEEEEecchhhcCC--CCCCCccccCCCC--CCCchHHHHHHHHHHHHH
Confidence 345567778888999999999887 5577888887655 445664 3345789998865 3333554 444444
Q ss_pred --cC-CCceEEEeccCceeecCCCch--------hhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCc---cccccccc
Q 042656 83 --YS-PAVTYSVHRSSIIIGASSRSL--------NNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNK---YTWEHFCD 148 (289)
Q Consensus 83 --~~-~g~~~~ivRP~~V~G~~~gn~--------~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~---~~~~~~~~ 148 (289)
+. .++.++++||+.|||+.++.. .+++..+ .........++.. .|+. ....+.++
T Consensus 159 ~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~g~~~~~ 227 (328)
T TIGR01179 159 LSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYA---CQVAVGKRDKLTI--------FGTDYPTPDGTCVRD 227 (328)
T ss_pred HHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHH---HHHHHhCCCCeEE--------eCCcccCCCCceEEe
Confidence 23 689999999999999965221 1221111 0111112345554 3321 01236789
Q ss_pred ccchHHHHHHHHHHhcCC--CcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHH
Q 042656 149 MSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEK 226 (289)
Q Consensus 149 ~~~~~~la~~~i~aa~~p--~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k 226 (289)
+++++++|+++..|+.+. ...+++||+++++.+|+.|+.+.|++.+|.+..... .+
T Consensus 228 ~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~--~~-------------------- 285 (328)
T TIGR01179 228 YIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVEL--AP-------------------- 285 (328)
T ss_pred eeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEe--CC--------------------
Confidence 999999999999888753 245799999999999999999999999997643210 00
Q ss_pred hCCCccccccccchhhhhhhhcccccccccHHHHHhc-CCCCCcC-hHHHHHHHHHHHHH
Q 042656 227 HGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVD-TMKSIRTWVKKLRE 284 (289)
Q Consensus 227 ~gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~d-t~e~~~~~~~~lr~ 284 (289)
... ....+..+|.+|+++. ||.|..+ .++++.++++|+++
T Consensus 286 -----~~~-------------~~~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~ 327 (328)
T TIGR01179 286 -----RRP-------------GDPASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESR 327 (328)
T ss_pred -----CCC-------------ccccchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhc
Confidence 000 0011456789999884 9999998 99999999999875
No 33
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.66 E-value=5.6e-15 Score=136.83 Aligned_cols=216 Identities=15% Similarity=0.156 Sum_probs=145.2
Q ss_pred cccCCc-hhhccChHHHHHhhhhHhhhccCceeecccc-c--ccCcc-CCCCCCCCCCCCCCCC----CCChHHHHHHHH
Q 042656 11 PISDPS-LTVGASSRSLHNSLLPLAVHTNICKYQGLPF-R--YFGQL-IGHDPPFKEDSVRLPF----PNFYYAVEDIAA 81 (289)
Q Consensus 11 ~~~~p~-~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~-~--~~g~~-~~~~~P~~E~~pr~p~----p~fyy~qEd~L~ 81 (289)
+..+|. ..+.+|+.++.+.++.+.-..++|++..++. . .||.. .....|.+|+.|..|. +...|...+.+.
T Consensus 90 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~ 169 (322)
T PLN02662 90 DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLA 169 (322)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHH
Confidence 456776 6788999999999998543338888887663 2 25431 0123568888876541 123477666555
Q ss_pred h-------cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHH
Q 042656 82 S-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRV 154 (289)
Q Consensus 82 e-------~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~ 154 (289)
| +..++.++++||+.|||+.....++... ..+...+ .|.+ .+ |. +.+|++++++
T Consensus 170 E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~-~~~~~~~---~~~~-~~--------~~------~~~~~i~v~D 230 (322)
T PLN02662 170 EEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSA-EAILNLI---NGAQ-TF--------PN------ASYRWVDVRD 230 (322)
T ss_pred HHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchH-HHHHHHh---cCCc-cC--------CC------CCcCeEEHHH
Confidence 5 3468999999999999996422112111 1111122 2443 24 42 5689999999
Q ss_pred HHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccc
Q 042656 155 LAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKM 234 (289)
Q Consensus 155 la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l 234 (289)
+|++++.++.++...+ .||++ |+.+|++|+...|++.++... . |... . ...+.
T Consensus 231 va~a~~~~~~~~~~~~-~~~~~-g~~~s~~e~~~~i~~~~~~~~-~-----~~~~----~---------------~~~~~ 283 (322)
T PLN02662 231 VANAHIQAFEIPSASG-RYCLV-ERVVHYSEVVKILHELYPTLQ-L-----PEKC----A---------------DDKPY 283 (322)
T ss_pred HHHHHHHHhcCcCcCC-cEEEe-CCCCCHHHHHHHHHHHCCCCC-C-----CCCC----C---------------Ccccc
Confidence 9999999998875544 78997 688999999999999877421 1 1000 0 00000
Q ss_pred ccccchhhhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHHHHHCCCC
Q 042656 235 EEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKKLREMKII 288 (289)
Q Consensus 235 ~~l~~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~lr~~~ii 288 (289)
.....+|.+|++++||.+ .++++++.++++||++.+++
T Consensus 284 ---------------~~~~~~d~~k~~~lg~~~-~~~~~~l~~~~~~~~~~~~~ 321 (322)
T PLN02662 284 ---------------VPTYQVSKEKAKSLGIEF-IPLEVSLKDTVESLKEKGFL 321 (322)
T ss_pred ---------------ccccccChHHHHHhCCcc-ccHHHHHHHHHHHHHHcCCC
Confidence 114579999999999985 79999999999999999876
No 34
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.66 E-value=7.2e-15 Score=136.71 Aligned_cols=216 Identities=18% Similarity=0.218 Sum_probs=142.5
Q ss_pred cccCCc-hhhccChHHHHHhhhhHhhhccCceeeccc-ccc--cCcc-CCCCCCCCCCCCCCC----CCCChHHHHHHHH
Q 042656 11 PISDPS-LTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRY--FGQL-IGHDPPFKEDSVRLP----FPNFYYAVEDIAA 81 (289)
Q Consensus 11 ~~~~p~-~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~--~g~~-~~~~~P~~E~~pr~p----~p~fyy~qEd~L~ 81 (289)
+..+|. ..+..|+.++.+.|+...-..|+|+...++ ... +|.. .....+++|+++..| .|+..|...|.+.
T Consensus 91 ~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~a 170 (322)
T PLN02986 91 TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILA 170 (322)
T ss_pred CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHH
Confidence 445665 357889999999999844334788888766 322 2321 012345788876443 2345577666655
Q ss_pred h-------cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHH
Q 042656 82 S-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRV 154 (289)
Q Consensus 82 e-------~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~ 154 (289)
| +..+++++++||+.|||+.....++....+ +... ..|.++ + + .+.++++++++
T Consensus 171 E~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~-~~~~---~~g~~~-~--------~------~~~~~~v~v~D 231 (322)
T PLN02986 171 ENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVEL-IVDF---INGKNL-F--------N------NRFYRFVDVRD 231 (322)
T ss_pred HHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHH-HHHH---HcCCCC-C--------C------CcCcceeEHHH
Confidence 5 346899999999999999642111111100 1111 134442 3 2 25678999999
Q ss_pred HHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccc
Q 042656 155 LAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKM 234 (289)
Q Consensus 155 la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l 234 (289)
+|+++++|+++|... +.||+ +|+.+|++++...|++.|+- ...+. ..+ +...
T Consensus 232 va~a~~~al~~~~~~-~~yni-~~~~~s~~e~~~~i~~~~~~-~~~~~-~~~------------------------~~~~ 283 (322)
T PLN02986 232 VALAHIKALETPSAN-GRYII-DGPIMSVNDIIDILRELFPD-LCIAD-TNE------------------------ESEM 283 (322)
T ss_pred HHHHHHHHhcCcccC-CcEEE-ecCCCCHHHHHHHHHHHCCC-CCCCC-CCc------------------------cccc
Confidence 999999999988654 48999 56789999999999999873 11110 000 0000
Q ss_pred ccccchhhhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHHHHHCCCC
Q 042656 235 EEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKKLREMKII 288 (289)
Q Consensus 235 ~~l~~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~lr~~~ii 288 (289)
.. ....+|.+|++++||++. +++|++.++++|+++.|+|
T Consensus 284 ~~--------------~~~~~d~~~~~~lg~~~~-~l~e~~~~~~~~~~~~~~~ 322 (322)
T PLN02986 284 NE--------------MICKVCVEKVKNLGVEFT-PMKSSLRDTILSLKEKCLL 322 (322)
T ss_pred cc--------------cCCccCHHHHHHcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence 00 012578899999999986 8999999999999999876
No 35
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.65 E-value=2.9e-15 Score=138.40 Aligned_cols=167 Identities=18% Similarity=0.150 Sum_probs=124.0
Q ss_pred CCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCC---CCCCCCCCCCCChHHHHHHHHh------c
Q 042656 14 DPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPF---KEDSVRLPFPNFYYAVEDIAAS------Y 83 (289)
Q Consensus 14 ~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~---~E~~pr~p~p~fyy~qEd~L~e------~ 83 (289)
.+.....+|+.||.+.|+. +...|+|+.+..| ...+++- ....|+ +|+.|..+.+...|...|.++| .
T Consensus 84 ~~~~~~~vNV~GT~nvl~a-a~~~~VkrlVytSS~~vv~~~-~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~ 161 (280)
T PF01073_consen 84 PPEEYYKVNVDGTRNVLEA-ARKAGVKRLVYTSSISVVFDN-YKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEAN 161 (280)
T ss_pred cHHHHHHHHHHHHHHHHHH-HHHcCCCEEEEEcCcceeEec-cCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhc
Confidence 4556889999999999998 7789999998766 4444431 112343 5776655445667887777777 1
Q ss_pred C------CCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHH
Q 042656 84 S------PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAE 157 (289)
Q Consensus 84 ~------~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~ 157 (289)
. ..+.+++|||..|||+++..+...+... ...|..+.. .|++. +..|++|++|+|+
T Consensus 162 ~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~-------~~~g~~~~~--------~g~~~---~~~~~vyV~NvA~ 223 (280)
T PF01073_consen 162 GSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKM-------VRSGLFLFQ--------IGDGN---NLFDFVYVENVAH 223 (280)
T ss_pred ccccccccceeEEEEeccEEeCcccccccchhhHH-------HHhccccee--------ecCCC---ceECcEeHHHHHH
Confidence 2 2499999999999999875443333221 135645554 55543 7899999999999
Q ss_pred HHHHHhc---C----CCcCCCeeEecCCCccC-HHHHHHHHHHHhCCCCCC
Q 042656 158 QQIWAAT---T----DRAKNQAFNCTNGDVFT-WKSLWKLLSEIFDVEFVP 200 (289)
Q Consensus 158 ~~i~aa~---~----p~a~ge~FNi~dg~~~s-~~~lw~~la~~~G~~~~~ 200 (289)
+++.|+. . +.+.||+|+|+|+++.. +.+++..|.+.+|.+...
T Consensus 224 ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 224 AHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred HHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 9999975 2 34689999999999999 999999999999998654
No 36
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.63 E-value=1.9e-14 Score=131.97 Aligned_cols=216 Identities=16% Similarity=0.117 Sum_probs=154.5
Q ss_pred CCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCC-CCCCCCCCChHHHHHHHHh-------cC
Q 042656 14 DPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKED-SVRLPFPNFYYAVEDIAAS-------YS 84 (289)
Q Consensus 14 ~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~-~pr~p~p~fyy~qEd~L~e-------~~ 84 (289)
+|.....+|+.++.+.++. +.+.|+|+....+ ...+|.. ....|..|+ .|.. |...|...+...| ..
T Consensus 84 ~~~~~~~~nv~gt~~ll~a-a~~~~~~~~v~~ss~~~~~~~-~~~~~~~E~~~~~~--p~~~Yg~sK~~~E~~~~~~~~~ 159 (314)
T COG0451 84 DPAEFLDVNVDGTLNLLEA-ARAAGVKRFVFASSVSVVYGD-PPPLPIDEDLGPPR--PLNPYGVSKLAAEQLLRAYARL 159 (314)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHHcCCCeEEEeCCCceECCC-CCCCCcccccCCCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 4667899999999999999 6568999988744 2334431 223478998 4544 3336887666666 23
Q ss_pred CCceEEEeccCceeecCC-CchhhhHHHHHHHHHHHHHhCCC-eEEEeccccCCCCCcccccccccccchHHHHHHHHHH
Q 042656 85 PAVTYSVHRSSIIIGASS-RSLNNSLLTLAVYATICRHQGLP-FRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWA 162 (289)
Q Consensus 85 ~g~~~~ivRP~~V~G~~~-gn~~nl~~~l~vyaal~~~~g~p-l~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~a 162 (289)
.+++++++||+.|||+.. .+.-..+... ...+...+.| ..+ .+++. +.+++++++++|++++++
T Consensus 160 ~~~~~~ilR~~~vyGp~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------~~~~~---~~~~~i~v~D~a~~~~~~ 225 (314)
T COG0451 160 YGLPVVILRPFNVYGPGDKPDLSSGVVSA---FIRQLLKGEPIIVI--------GGDGS---QTRDFVYVDDVADALLLA 225 (314)
T ss_pred hCCCeEEEeeeeeeCCCCCCCCCcCcHHH---HHHHHHhCCCcceE--------eCCCc---eeEeeEeHHHHHHHHHHH
Confidence 589999999999999986 3421111111 0111236776 666 55554 778999999999999999
Q ss_pred hcCCCcCCCeeEecCCC-ccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccchh
Q 042656 163 ATTDRAKNQAFNCTNGD-VFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCFE 241 (289)
Q Consensus 163 a~~p~a~ge~FNi~dg~-~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~ 241 (289)
+.++... .|||++++ ..|.+++...+++.+|.+..... ..+. . ...
T Consensus 226 ~~~~~~~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~-~~~~----------------------~-~~~------- 272 (314)
T COG0451 226 LENPDGG--VFNIGSGTAEITVRELAEAVAEAVGSKAPLIV-YIPL----------------------G-RRG------- 272 (314)
T ss_pred HhCCCCc--EEEeCCCCCcEEHHHHHHHHHHHhCCCCccee-ecCC----------------------C-CCC-------
Confidence 9988655 99999997 99999999999999999755210 0000 0 000
Q ss_pred hhhhhhcccccccccHHHHHh-cCCCCCcChHHHHHHHHHHHHHCC
Q 042656 242 ALNTVLHLQFQHVSSMNKSRE-FGFFGFVDTMKSIRTWVKKLREMK 286 (289)
Q Consensus 242 f~d~~~~~~~~~~~d~~Kar~-~Gw~~~~dt~e~~~~~~~~lr~~~ 286 (289)
.......+|.+|+++ +||.|..+..+++.++++++...+
T Consensus 273 ------~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 273 ------DLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred ------cccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 112367899999997 599999999999999999988764
No 37
>PLN02650 dihydroflavonol-4-reductase
Probab=99.62 E-value=4.4e-14 Score=133.24 Aligned_cols=215 Identities=15% Similarity=0.126 Sum_probs=139.8
Q ss_pred cCCc-hhhccChHHHHHhhhhHhhhcc-Cceeeccc-ccccCccCCCCCC-CCCCCCC-------CCCCCChHHHHHHHH
Q 042656 13 SDPS-LTVGASSRSLHNSLLPLAVHTN-ICKYQGLP-FRYFGQLIGHDPP-FKEDSVR-------LPFPNFYYAVEDIAA 81 (289)
Q Consensus 13 ~~p~-~~~~~~~~~~~~~l~~~~l~tG-~k~yg~~~-~~~~g~~~~~~~P-~~E~~pr-------~p~p~fyy~qEd~L~ 81 (289)
.+|. ..+.+|+.++.+.|+. +...| +|++..+| ...++.. ....| ++|+... .+.|...|.+.+...
T Consensus 93 ~~~~~~~~~~Nv~gt~~ll~a-a~~~~~~~r~v~~SS~~~~~~~-~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~ 170 (351)
T PLN02650 93 KDPENEVIKPTVNGMLSIMKA-CAKAKTVRRIVFTSSAGTVNVE-EHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLA 170 (351)
T ss_pred CCchhhhhhHHHHHHHHHHHH-HHhcCCceEEEEecchhhcccC-CCCCCccCcccCCchhhhhccccccchHHHHHHHH
Confidence 3554 6788999999999999 44555 67887655 3344421 12334 5776421 112334577766665
Q ss_pred h-------cCCCceEEEeccCceeecCCCchh-hhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchH
Q 042656 82 S-------YSPAVTYSVHRSSIIIGASSRSLN-NSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSR 153 (289)
Q Consensus 82 e-------~~~g~~~~ivRP~~V~G~~~gn~~-nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~ 153 (289)
| +..++.++++||++|||+..+..+ ..... .+....|....+ . .. ..+|+++++
T Consensus 171 E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~-----~~~~~~~~~~~~--------~-~~----~~r~~v~V~ 232 (351)
T PLN02650 171 EKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLIT-----ALSLITGNEAHY--------S-II----KQGQFVHLD 232 (351)
T ss_pred HHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHH-----HHHHhcCCcccc--------C-cC----CCcceeeHH
Confidence 5 346999999999999999753211 11110 010112333223 1 11 347999999
Q ss_pred HHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccc
Q 042656 154 VLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTK 233 (289)
Q Consensus 154 ~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~ 233 (289)
++|++++.++.++... +.|| ..|..+|+.++...|++.++... .+ ..+ . + .+
T Consensus 233 Dva~a~~~~l~~~~~~-~~~i-~~~~~~s~~el~~~i~~~~~~~~-~~-----~~~----~-------------~---~~ 284 (351)
T PLN02650 233 DLCNAHIFLFEHPAAE-GRYI-CSSHDATIHDLAKMLREKYPEYN-IP-----ARF----P-------------G---ID 284 (351)
T ss_pred HHHHHHHHHhcCcCcC-ceEE-ecCCCcCHHHHHHHHHHhCcccC-CC-----CCC----C-------------C---cC
Confidence 9999999999876544 4794 55678999999999999886321 11 100 0 0 00
Q ss_pred cccccchhhhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHHHHHCCCCC
Q 042656 234 MEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKKLREMKIIP 289 (289)
Q Consensus 234 l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~lr~~~iiP 289 (289)
. .......|.+|++++||.|.+++++++.++++|+++.+.+|
T Consensus 285 ~--------------~~~~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~~~~~~ 326 (351)
T PLN02650 285 E--------------DLKSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIP 326 (351)
T ss_pred c--------------ccccccCChHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 0 11134678899988999999999999999999999998875
No 38
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.61 E-value=1.7e-14 Score=131.05 Aligned_cols=204 Identities=14% Similarity=0.088 Sum_probs=132.5
Q ss_pred CCchhhccChHHHHHhhhhHhhhccCc--eeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHH-----HHHHHHh-cC
Q 042656 14 DPSLTVGASSRSLHNSLLPLAVHTNIC--KYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYA-----VEDIAAS-YS 84 (289)
Q Consensus 14 ~p~~~~~~~~~~~~~~l~~~~l~tG~k--~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~-----qEd~L~e-~~ 84 (289)
++......|+.++.+.++. +...|+| ++...+ ...||. ....|+.|+.|+. |..||. .|+.+.. +.
T Consensus 78 ~~~~~~~~n~~~~~~l~~a-~~~~~~~~~~~i~~S~~~~yg~--~~~~~~~E~~~~~--~~~~~~~~~~~~e~~~~~~~~ 152 (292)
T TIGR01777 78 RKQEIRDSRIDTTRALVEA-IAAAEQKPKVFISASAVGYYGT--SEDRVFTEEDSPA--GDDFLAELCRDWEEAAQAAED 152 (292)
T ss_pred HHHHHHhcccHHHHHHHHH-HHhcCCCceEEEEeeeEEEeCC--CCCCCcCcccCCC--CCChHHHHHHHHHHHhhhchh
Confidence 4455677899999998888 5677764 454433 335665 3356889998643 333443 2444333 34
Q ss_pred CCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhc
Q 042656 85 PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAAT 164 (289)
Q Consensus 85 ~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~ 164 (289)
.+++++++||+.|||+..+. ++....+ + .....-++ |++ .+.+++++++++|+++.+++.
T Consensus 153 ~~~~~~ilR~~~v~G~~~~~-~~~~~~~-----~--~~~~~~~~---------g~~---~~~~~~i~v~Dva~~i~~~l~ 212 (292)
T TIGR01777 153 LGTRVVLLRTGIVLGPKGGA-LAKMLPP-----F--RLGLGGPL---------GSG---RQWFSWIHIEDLVQLILFALE 212 (292)
T ss_pred cCCceEEEeeeeEECCCcch-hHHHHHH-----H--hcCccccc---------CCC---CcccccEeHHHHHHHHHHHhc
Confidence 58999999999999997532 2221111 0 11111123 333 378999999999999999998
Q ss_pred CCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccchhhhh
Q 042656 165 TDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCFEALN 244 (289)
Q Consensus 165 ~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~f~d 244 (289)
++.. ++.||+++++.+|+.|+...|++.+|.+...+ .|....+.+.+. .+- .
T Consensus 213 ~~~~-~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~---~p~~~~~~~~~~---------------~~~-~-------- 264 (292)
T TIGR01777 213 NASI-SGPVNATAPEPVRNKEFAKALARALHRPAFFP---VPAFVLRALLGE---------------MAD-L-------- 264 (292)
T ss_pred Cccc-CCceEecCCCccCHHHHHHHHHHHhCCCCcCc---CCHHHHHHHhch---------------hhH-H--------
Confidence 8654 56899999999999999999999999764321 332222211100 000 0
Q ss_pred hhhcccccccccHHHHHhcCCCCCc-ChHHH
Q 042656 245 TVLHLQFQHVSSMNKSREFGFFGFV-DTMKS 274 (289)
Q Consensus 245 ~~~~~~~~~~~d~~Kar~~Gw~~~~-dt~e~ 274 (289)
...+...+.+|+|++||++.+ +++|+
T Consensus 265 ----~~~~~~~~~~~~~~~g~~~~~~~~~~~ 291 (292)
T TIGR01777 265 ----LLKGQRVLPEKLLEAGFQFQYPDLDEA 291 (292)
T ss_pred ----HhCCcccccHHHHhcCCeeeCcChhhc
Confidence 012667889999999999999 46665
No 39
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.60 E-value=5.1e-14 Score=132.01 Aligned_cols=221 Identities=14% Similarity=0.090 Sum_probs=142.9
Q ss_pred ccCCch-hhccChHHHHHhhhhHhhhccCceeeccc-ccccCccC--CCCCCCCCCCCC-------CCCCCChHHHHHHH
Q 042656 12 ISDPSL-TVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLI--GHDPPFKEDSVR-------LPFPNFYYAVEDIA 80 (289)
Q Consensus 12 ~~~p~~-~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~--~~~~P~~E~~pr-------~p~p~fyy~qEd~L 80 (289)
..+|.. .+.+|+.++.+.++.+....|+|+...++ ...||... ....|.+|+... .++|..-|.+.|..
T Consensus 95 ~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~ 174 (338)
T PLN00198 95 SEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTL 174 (338)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHH
Confidence 345653 46889999999999955445688887666 45565310 013466665310 11244447765555
Q ss_pred Hh-------cCCCceEEEeccCceeecCCC-chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCC-Cc-cccccccccc
Q 042656 81 AS-------YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSG-NK-YTWEHFCDMS 150 (289)
Q Consensus 81 ~e-------~~~g~~~~ivRP~~V~G~~~g-n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG-~~-~~~~~~~~~~ 150 (289)
.| +..+++++++||+.|||+..+ .....+. + +... ..|.++.. .| ++ ..+...+|++
T Consensus 175 ~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~-~~~~---~~~~~~~~--------~g~~~~~~~~~~~~~i 241 (338)
T PLN00198 175 AEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-L-AMSL---ITGNEFLI--------NGLKGMQMLSGSISIT 241 (338)
T ss_pred HHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-H-HHHH---HcCCcccc--------ccccccccccCCccee
Confidence 54 346899999999999999752 2111111 1 1111 24666655 33 11 1123457999
Q ss_pred chHHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCC
Q 042656 151 DSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLY 230 (289)
Q Consensus 151 ~~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~ 230 (289)
+++++|+++++++.++.. ++.|| ..|+.+|++++.+.|++.++... . +.. +..
T Consensus 242 ~V~D~a~a~~~~~~~~~~-~~~~~-~~~~~~s~~el~~~i~~~~~~~~-~-----~~~---~~~---------------- 294 (338)
T PLN00198 242 HVEDVCRAHIFLAEKESA-SGRYI-CCAANTSVPELAKFLIKRYPQYQ-V-----PTD---FGD---------------- 294 (338)
T ss_pred EHHHHHHHHHHHhhCcCc-CCcEE-EecCCCCHHHHHHHHHHHCCCCC-C-----Ccc---ccc----------------
Confidence 999999999999987643 34685 55678899999999998876321 1 100 000
Q ss_pred ccccccccchhhhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHHHHHCCCC
Q 042656 231 KTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKKLREMKII 288 (289)
Q Consensus 231 ~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~lr~~~ii 288 (289)
.+. .....+|.+|++++||+|.++++|++.++++|+++.+.+
T Consensus 295 -~~~---------------~~~~~~~~~k~~~~G~~p~~~l~~gi~~~~~~~~~~~~~ 336 (338)
T PLN00198 295 -FPS---------------KAKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKGLL 336 (338)
T ss_pred -cCC---------------CCccccChHHHHhCCceecCcHHHHHHHHHHHHHHcCCC
Confidence 000 013467889999999999999999999999999998875
No 40
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.55 E-value=3e-13 Score=127.73 Aligned_cols=226 Identities=11% Similarity=0.063 Sum_probs=139.0
Q ss_pred ccCCchhhccC-----hHHHHHhhhhHhhhccCceeeccc-ccccCccCC---CCCCCCCCCCCC-------CCCCChHH
Q 042656 12 ISDPSLTVGAS-----SRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIG---HDPPFKEDSVRL-------PFPNFYYA 75 (289)
Q Consensus 12 ~~~p~~~~~~~-----~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~---~~~P~~E~~pr~-------p~p~fyy~ 75 (289)
..+|......| +.++.+.|+...-..++|++..++ ...||.... ...|.+|+.+.. ++|..-|.
T Consensus 98 ~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~ 177 (353)
T PLN02896 98 HNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYV 177 (353)
T ss_pred ccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHH
Confidence 34565554455 488999998843333477777655 456763101 124677874321 12333477
Q ss_pred HHHHHHh-------cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCccccccccc
Q 042656 76 VEDIAAS-------YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCD 148 (289)
Q Consensus 76 qEd~L~e-------~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~ 148 (289)
+.|...| +..++..+++||+.||||.....++... ...+....|.+..++. .|........+|
T Consensus 178 ~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~----~~~~~~~~g~~~~~~~------~~~~~~~~~~~d 247 (353)
T PLN02896 178 LSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSI----QVLLSPITGDSKLFSI------LSAVNSRMGSIA 247 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchH----HHHHHHhcCCcccccc------ccccccccCcee
Confidence 6666655 3468999999999999996421111111 1111111344322300 111110112469
Q ss_pred ccchHHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhC
Q 042656 149 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHG 228 (289)
Q Consensus 149 ~~~~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~g 228 (289)
+++++++|++++.++..+.. +..||+ .|+.+|++|+...|++.++...... +...
T Consensus 248 fi~v~Dva~a~~~~l~~~~~-~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~---------~~~~-------------- 302 (353)
T PLN02896 248 LVHIEDICDAHIFLMEQTKA-EGRYIC-CVDSYDMSELINHLSKEYPCSNIQV---------RLDE-------------- 302 (353)
T ss_pred EEeHHHHHHHHHHHHhCCCc-CccEEe-cCCCCCHHHHHHHHHHhCCCCCccc---------cccc--------------
Confidence 99999999999999987644 347876 5788999999999999987321100 0000
Q ss_pred CCccccccccchhhhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHHHHHCCCCC
Q 042656 229 LYKTKMEEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKKLREMKIIP 289 (289)
Q Consensus 229 l~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~lr~~~iiP 289 (289)
... + +....+|.+|++++||.|.+++++++.++++|+++.+.+|
T Consensus 303 ---~~~-------------~-~~~~~~~~~~~~~lGw~p~~~l~~~i~~~~~~~~~~~~~~ 346 (353)
T PLN02896 303 ---EKR-------------G-SIPSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDHGFLP 346 (353)
T ss_pred ---ccc-------------C-ccccccCHHHHHHcCCCccCCHHHHHHHHHHHHHHCCCCC
Confidence 000 0 0123458899999999999999999999999999998775
No 41
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.50 E-value=1.7e-12 Score=131.90 Aligned_cols=237 Identities=11% Similarity=0.076 Sum_probs=144.6
Q ss_pred CchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCC-CCCChHHHHHHHHh----cCCCce
Q 042656 15 PSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLP-FPNFYYAVEDIAAS----YSPAVT 88 (289)
Q Consensus 15 p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p-~p~fyy~qEd~L~e----~~~g~~ 88 (289)
+.....+|+.++.+.++. +...|.|++..+| ...+|. ...+++|++...+ .+..-|.+.|...| +..+++
T Consensus 94 ~~~~~~~nv~gt~~ll~~-a~~~~~~~~v~~SS~~v~g~---~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~g~~ 169 (657)
T PRK07201 94 EEAQRAANVDGTRNVVEL-AERLQAATFHHVSSIAVAGD---YEGVFREDDFDEGQGLPTPYHRTKFEAEKLVREECGLP 169 (657)
T ss_pred HHHHHHHHhHHHHHHHHH-HHhcCCCeEEEEeccccccC---ccCccccccchhhcCCCCchHHHHHHHHHHHHHcCCCc
Confidence 344567899999999988 6678889888766 556664 2345677664322 22233555555554 246899
Q ss_pred EEEeccCceeecCC-CchhhhHHHHHHHHHHHHHhCCC--eEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcC
Q 042656 89 YSVHRSSIIIGASS-RSLNNSLLTLAVYATICRHQGLP--FRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATT 165 (289)
Q Consensus 89 ~~ivRP~~V~G~~~-gn~~nl~~~l~vyaal~~~~g~p--l~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~ 165 (289)
++|+||+.|||+.. +..-+.-....++-.+.+-...| ++. +|... ...++++++++|+++++++..
T Consensus 170 ~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~v~vddva~ai~~~~~~ 238 (657)
T PRK07201 170 WRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPM--------VGPDG---GRTNIVPVDYVADALDHLMHK 238 (657)
T ss_pred EEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCccccc--------ccCCC---CeeeeeeHHHHHHHHHHHhcC
Confidence 99999999999864 22111000000111111111222 333 33322 557899999999999999887
Q ss_pred CCcCCCeeEecCCCccCHHHHHHHHHHHhCCCC---CCCCCCCcccHHHHHHH---hHHHHHHHH-HHhCCCcccccccc
Q 042656 166 DRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEF---VPFDEKEKFDVVEMMEE---KGEIWDEIV-EKHGLYKTKMEEIT 238 (289)
Q Consensus 166 p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~---~~~~~~~p~~l~~~~~~---~~~~W~~i~-~k~gl~~~~l~~l~ 238 (289)
+...|++|||++++.+|+.|+...|++.+|.+. .. ...|..+...+.. ....+.+.+ ++.++.+..++.
T Consensus 239 ~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 314 (657)
T PRK07201 239 DGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLF--GFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDF-- 314 (657)
T ss_pred cCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCcccccc--ccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHh--
Confidence 777899999999999999999999999999876 21 1145444444332 112233322 334444333322
Q ss_pred chhhhhhhhcccccccccHHHHHh-c-CC-CCCcChHHHHHHHHH
Q 042656 239 CFEALNTVLHLQFQHVSSMNKSRE-F-GF-FGFVDTMKSIRTWVK 280 (289)
Q Consensus 239 ~w~f~d~~~~~~~~~~~d~~Kar~-~-Gw-~~~~dt~e~~~~~~~ 280 (289)
..+...+|.+|+++ + |. -......+.+.+.++
T Consensus 315 ----------~~~~~~f~~~~~~~~L~~~~~~~p~~~~~~~~~~~ 349 (657)
T PRK07201 315 ----------VNYPTTFDSRETRAALKGSGIEVPRLASYAPRLWD 349 (657)
T ss_pred ----------ccCCCeeccHHHHHHhccCCcCCCChHHHHHHHHH
Confidence 13367889999998 3 43 233345566666665
No 42
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.48 E-value=3.8e-13 Score=124.86 Aligned_cols=223 Identities=14% Similarity=0.075 Sum_probs=164.2
Q ss_pred ccccCcccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCC-C-CC--CChHHHHH
Q 042656 4 CEIHYTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRL-P-FP--NFYYAVED 78 (289)
Q Consensus 4 ~~~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~-p-~p--~fyy~qEd 78 (289)
+.-+|..|+++|....+.|..++.+.|+- +..-|.|..+..+ ...||+ +...|++|++|.. | .| .-.|..|+
T Consensus 86 ~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~-~~~~~~~~~V~sssatvYG~--p~~ip~te~~~t~~p~~pyg~tK~~iE~ 162 (343)
T KOG1371|consen 86 ALAAVGESMENPLSYYHNNIAGTLNLLEV-MKAHNVKALVFSSSATVYGL--PTKVPITEEDPTDQPTNPYGKTKKAIEE 162 (343)
T ss_pred hhhccchhhhCchhheehhhhhHHHHHHH-HHHcCCceEEEecceeeecC--cceeeccCcCCCCCCCCcchhhhHHHHH
Confidence 34569999999999999999999999998 6677799888766 788998 7789999999987 4 33 12344455
Q ss_pred HHHh--cCCCceEEEeccCceeecCC------------CchhhhHHHHHHHHHHHHH-----hCCCeEEEeccccCCCCC
Q 042656 79 IAAS--YSPAVTYSVHRSSIIIGASS------------RSLNNSLLTLAVYATICRH-----QGLPFRYLAIHGSSLSGN 139 (289)
Q Consensus 79 ~L~e--~~~g~~~~ivRP~~V~G~~~------------gn~~nl~~~l~vyaal~~~-----~g~pl~f~~~~~~~~pG~ 139 (289)
...+ +..+|..+.+|.++++|..+ +|.|.-+..++ +-|. .|.+... -+
T Consensus 163 i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~va----igr~~~l~v~g~d~~t--------~d- 229 (343)
T KOG1371|consen 163 IIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVA----IGRRPNLQVVGRDYTT--------ID- 229 (343)
T ss_pred HHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchh----hcccccceeecCcccc--------cC-
Confidence 5555 44569999999999999321 22232222221 1111 2444444 11
Q ss_pred cccccccccccchHHHHHHHHHHhcCCCc--CCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhH
Q 042656 140 KYTWEHFCDMSDSRVLAEQQIWAATTDRA--KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKG 217 (289)
Q Consensus 140 ~~~~~~~~~~~~~~~la~~~i~aa~~p~a--~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~ 217 (289)
+ ..++|++++-.+|+..+-|+....+ .-.+||..+|...|..+|..++++..|++.... .+.
T Consensus 230 g---t~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~----------~v~--- 293 (343)
T KOG1371|consen 230 G---TIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKK----------VVP--- 293 (343)
T ss_pred C---CeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCcc----------ccC---
Confidence 1 3899999999999999999976654 336999999999999999999999999986542 111
Q ss_pred HHHHHHHHHhCCCccccccccchhhhhhhhcccccccccHHHHHh-cCCCCCcChHHHHHHHHHHHHHC
Q 042656 218 EIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFVDTMKSIRTWVKKLREM 285 (289)
Q Consensus 218 ~~W~~i~~k~gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~-~Gw~~~~dt~e~~~~~~~~lr~~ 285 (289)
.+- ++.-....+.++|++ +||++..+++|++++.++|..+.
T Consensus 294 --------------~R~-------------gdv~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~n 335 (343)
T KOG1371|consen 294 --------------RRN-------------GDVAFVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQN 335 (343)
T ss_pred --------------CCC-------------CCceeeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcC
Confidence 111 223356778888877 69999999999999999998764
No 43
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.47 E-value=1.1e-13 Score=121.78 Aligned_cols=148 Identities=20% Similarity=0.268 Sum_probs=113.8
Q ss_pred ccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh------
Q 042656 10 GPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS------ 82 (289)
Q Consensus 10 ~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e------ 82 (289)
.+..++...+..|+.++.+.|+. +...|++++..++ ...||. ....|++|+++.. |..+|.+.+.+.|
T Consensus 80 ~~~~~~~~~~~~n~~~~~~ll~~-~~~~~~~~~i~~sS~~~y~~--~~~~~~~e~~~~~--~~~~Y~~~K~~~e~~~~~~ 154 (236)
T PF01370_consen 80 ESFEDPEEIIEANVQGTRNLLEA-AREAGVKRFIFLSSASVYGD--PDGEPIDEDSPIN--PLSPYGASKRAAEELLRDY 154 (236)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHH-HHHHTTSEEEEEEEGGGGTS--SSSSSBETTSGCC--HSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccc-cccccccccccccccccccc--ccccccccccccc--ccccccccccccccccccc
Confidence 34478888899999999999999 7788888888766 667876 4567899999874 5555777665555
Q ss_pred -cCCCceEEEeccCceeecC-CCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHH
Q 042656 83 -YSPAVTYSVHRSSIIIGAS-SRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQI 160 (289)
Q Consensus 83 -~~~g~~~~ivRP~~V~G~~-~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i 160 (289)
+..++.++++||+.|||+. +....+....-.++.+. .|.|+.+ +|++. +.+|+++++++|++++
T Consensus 155 ~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~---~~~~~i~v~D~a~~~~ 220 (236)
T PF01370_consen 155 AKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQAL---KGKPIKI--------PGDGS---QVRDFIHVDDLAEAIV 220 (236)
T ss_dssp HHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHH---TTSSEEE--------ESTSS---CEEEEEEHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccchhhHHhh---cCCcccc--------cCCCC---CccceEEHHHHHHHHH
Confidence 3349999999999999999 22222222222222222 7889999 88876 8999999999999999
Q ss_pred HHhcCCCcCCCeeEec
Q 042656 161 WAATTDRAKNQAFNCT 176 (289)
Q Consensus 161 ~aa~~p~a~ge~FNi~ 176 (289)
++++++.+.|++|||+
T Consensus 221 ~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 221 AALENPKAAGGIYNIG 236 (236)
T ss_dssp HHHHHSCTTTEEEEES
T ss_pred HHHhCCCCCCCEEEeC
Confidence 9999998889999995
No 44
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.41 E-value=4.7e-13 Score=123.80 Aligned_cols=216 Identities=12% Similarity=0.113 Sum_probs=141.2
Q ss_pred ccCcccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh--
Q 042656 6 IHYTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS-- 82 (289)
Q Consensus 6 ~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e-- 82 (289)
.+|..+-++|.....+|+.++.+..+. +...|+ ++..+| ..+|+. ....|++|+++.. |..+|.+.+...|
T Consensus 62 ~~~~~ce~~p~~a~~iN~~~~~~la~~-~~~~~~-~li~~STd~VFdG--~~~~~y~E~d~~~--P~~~YG~~K~~~E~~ 135 (286)
T PF04321_consen 62 TNVDACEKNPEEAYAINVDATKNLAEA-CKERGA-RLIHISTDYVFDG--DKGGPYTEDDPPN--PLNVYGRSKLEGEQA 135 (286)
T ss_dssp --HHHHHHSHHHHHHHHTHHHHHHHHH-HHHCT--EEEEEEEGGGS-S--STSSSB-TTS------SSHHHHHHHHHHHH
T ss_pred ecHHhhhhChhhhHHHhhHHHHHHHHH-HHHcCC-cEEEeeccEEEcC--CcccccccCCCCC--CCCHHHHHHHHHHHH
Confidence 356777789999999999999777776 667776 454445 556643 3467899999955 7788998888777
Q ss_pred -cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHH
Q 042656 83 -YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIW 161 (289)
Q Consensus 83 -~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~ 161 (289)
....-.+.|+|++.|||....|+.+.+.-.. ..|.++.. ..+ ..++.++++.+|++++.
T Consensus 136 v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~-------~~~~~i~~--------~~d-----~~~~p~~~~dlA~~i~~ 195 (286)
T PF04321_consen 136 VRAACPNALILRTSWVYGPSGRNFLRWLLRRL-------RQGEPIKL--------FDD-----QYRSPTYVDDLARVILE 195 (286)
T ss_dssp HHHH-SSEEEEEE-SEESSSSSSHHHHHHHHH-------HCTSEEEE--------ESS-----CEE--EEHHHHHHHHHH
T ss_pred HHHhcCCEEEEecceecccCCCchhhhHHHHH-------hcCCeeEe--------eCC-----ceeCCEEHHHHHHHHHH
Confidence 2222389999999999997667765543221 36888888 554 67889999999999999
Q ss_pred HhcCCCc---CCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccccccc
Q 042656 162 AATTDRA---KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEIT 238 (289)
Q Consensus 162 aa~~p~a---~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~ 238 (289)
++....+ ...+||+++.+.+|+-|+...|++.+|.+.... .|.+..+ +...
T Consensus 196 l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i---~~~~~~~----------------------~~~~- 249 (286)
T PF04321_consen 196 LIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELI---KPVSSSE----------------------FPRA- 249 (286)
T ss_dssp HHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEE---EEESSTT----------------------STTS-
T ss_pred HHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceE---Eeccccc----------------------CCCC-
Confidence 9976532 457999999999999999999999999987321 1111110 0000
Q ss_pred chhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHH
Q 042656 239 CFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKL 282 (289)
Q Consensus 239 ~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~l 282 (289)
-..+.+..+|++|+++. |+++ .+.++++.+.++.+
T Consensus 250 --------~~rp~~~~L~~~kl~~~~g~~~-~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 250 --------APRPRNTSLDCRKLKNLLGIKP-PPWREGLEELVKQY 285 (286)
T ss_dssp --------SGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred --------CCCCCcccccHHHHHHccCCCC-cCHHHHHHHHHHHh
Confidence 01344789999999997 9887 56889999888765
No 45
>PRK05865 hypothetical protein; Provisional
Probab=99.39 E-value=7.1e-12 Score=130.78 Aligned_cols=184 Identities=14% Similarity=0.111 Sum_probs=125.5
Q ss_pred hhccChHHHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHhcCCCceEEEeccCce
Q 042656 18 TVGASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAASYSPAVTYSVHRSSII 97 (289)
Q Consensus 18 ~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e~~~g~~~~ivRP~~V 97 (289)
...+|+.++.+.++. +...|+|++..++. .. ....|+++.+ .+++++++||++|
T Consensus 75 ~~~vNv~GT~nLLeA-a~~~gvkr~V~iSS-----------~~------------K~aaE~ll~~--~gl~~vILRp~~V 128 (854)
T PRK05865 75 NDHINIDGTANVLKA-MAETGTGRIVFTSS-----------GH------------QPRVEQMLAD--CGLEWVAVRCALI 128 (854)
T ss_pred hHHHHHHHHHHHHHH-HHHcCCCeEEEECC-----------cH------------HHHHHHHHHH--cCCCEEEEEeceE
Confidence 456788999998888 56778888776321 10 4667777754 5899999999999
Q ss_pred eecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcCCCeeEecC
Q 042656 98 IGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTN 177 (289)
Q Consensus 98 ~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~ge~FNi~d 177 (289)
||+...+++..+ ...++.. .|+.. +.+|+++++++|++++.++.++...+++|||++
T Consensus 129 YGP~~~~~i~~l------------l~~~v~~--------~G~~~---~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgs 185 (854)
T PRK05865 129 FGRNVDNWVQRL------------FALPVLP--------AGYAD---RVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAA 185 (854)
T ss_pred eCCChHHHHHHH------------hcCceec--------cCCCC---ceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEEC
Confidence 999632221111 2233322 34432 667999999999999998876666678999999
Q ss_pred CCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccchhhhhhhhcccccccccH
Q 042656 178 GDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQHVSSM 257 (289)
Q Consensus 178 g~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~f~d~~~~~~~~~~~d~ 257 (289)
|+.+|++|+...+++... . .+..+..... .. ...+. ......+|+
T Consensus 186 g~~~Si~EIae~l~~~~~----~----v~~~~~~~~~---~~------------~~~~~------------~~~~~~~D~ 230 (854)
T PRK05865 186 PGELTFRRIAAALGRPMV----P----IGSPVLRRVT---SF------------AELEL------------LHSAPLMDV 230 (854)
T ss_pred CCcccHHHHHHHHhhhhc----c----CCchhhhhcc---ch------------hhhhc------------ccCCccCCH
Confidence 999999999888876431 1 1111100000 00 00000 011447899
Q ss_pred HHHHhc-CCCCCcChHHHHHHHHHHHHHC
Q 042656 258 NKSREF-GFFGFVDTMKSIRTWVKKLREM 285 (289)
Q Consensus 258 ~Kar~~-Gw~~~~dt~e~~~~~~~~lr~~ 285 (289)
+|+++. ||+|.+++++++.++++|||..
T Consensus 231 sKar~~LGw~P~~sLeeGL~dti~~~r~r 259 (854)
T PRK05865 231 TLLRDRWGFQPAWNAEECLEDFTLAVRGR 259 (854)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 999995 9999999999999999999863
No 46
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.35 E-value=6.1e-11 Score=109.32 Aligned_cols=215 Identities=14% Similarity=0.161 Sum_probs=156.0
Q ss_pred ccCcccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh--
Q 042656 6 IHYTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS-- 82 (289)
Q Consensus 6 ~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e-- 82 (289)
+.|...-.+|...+.+|+.+..+..+. +-..|.+ +..+| .-+|.. ....|++|+|++. |..+|.+.|++.|
T Consensus 61 t~vD~aE~~~e~A~~vNa~~~~~lA~a-a~~~ga~-lVhiSTDyVFDG--~~~~~Y~E~D~~~--P~nvYG~sKl~GE~~ 134 (281)
T COG1091 61 TAVDKAESEPELAFAVNATGAENLARA-AAEVGAR-LVHISTDYVFDG--EKGGPYKETDTPN--PLNVYGRSKLAGEEA 134 (281)
T ss_pred cccccccCCHHHHHHhHHHHHHHHHHH-HHHhCCe-EEEeecceEecC--CCCCCCCCCCCCC--ChhhhhHHHHHHHHH
Confidence 447888889999999999999998887 6677754 44434 334522 2357999999966 7789999999999
Q ss_pred -cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHH
Q 042656 83 -YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIW 161 (289)
Q Consensus 83 -~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~ 161 (289)
...+-...|+|..+|||...+||...+.-++ +.|.++.. -- +++.+-|++..||+++..
T Consensus 135 v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la-------~~~~~l~v--------v~-----Dq~gsPt~~~dlA~~i~~ 194 (281)
T COG1091 135 VRAAGPRHLILRTSWVYGEYGNNFVKTMLRLA-------KEGKELKV--------VD-----DQYGSPTYTEDLADAILE 194 (281)
T ss_pred HHHhCCCEEEEEeeeeecCCCCCHHHHHHHHh-------hcCCceEE--------EC-----CeeeCCccHHHHHHHHHH
Confidence 4567899999999999998888854444331 36778877 21 388888999999999888
Q ss_pred HhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccchh
Q 042656 162 AATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCFE 241 (289)
Q Consensus 162 aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~ 241 (289)
.+......+ +|++++...+||-++-..|.+.+|.+.... .|....++ . .+.
T Consensus 195 ll~~~~~~~-~yH~~~~g~~Swydfa~~I~~~~~~~~~v~---~~~~~~~~---------------~---~~a------- 245 (281)
T COG1091 195 LLEKEKEGG-VYHLVNSGECSWYEFAKAIFEEAGVDGEVI---EPIASAEY---------------P---TPA------- 245 (281)
T ss_pred HHhccccCc-EEEEeCCCcccHHHHHHHHHHHhCCCcccc---cccccccc---------------C---ccC-------
Confidence 776553333 999999888999999999999999887432 12222111 0 111
Q ss_pred hhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHH
Q 042656 242 ALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKK 281 (289)
Q Consensus 242 f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~ 281 (289)
-++.+..+|..|..+.+..+..+-++++..++++
T Consensus 246 ------~RP~~S~L~~~k~~~~~g~~~~~w~~~l~~~~~~ 279 (281)
T COG1091 246 ------KRPANSSLDTKKLEKAFGLSLPEWREALKALLDE 279 (281)
T ss_pred ------CCCcccccchHHHHHHhCCCCccHHHHHHHHHhh
Confidence 1344678999999998555555666666655543
No 47
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.34 E-value=2.5e-11 Score=113.23 Aligned_cols=217 Identities=9% Similarity=0.063 Sum_probs=133.9
Q ss_pred CCchhhccChHHHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHhcCCCceEEEec
Q 042656 14 DPSLTVGASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAASYSPAVTYSVHR 93 (289)
Q Consensus 14 ~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e~~~g~~~~ivR 93 (289)
+|.....+|..++.+.++. +...|+|++..+|. +|. +..+..+........|+.+. ..+++|+++|
T Consensus 78 ~~~~~~~~~~~~~~~l~~a-a~~~gvkr~I~~Ss--~~~---------~~~~~~~~~~~K~~~e~~l~--~~~l~~tilR 143 (317)
T CHL00194 78 DLYNAKQIDWDGKLALIEA-AKAAKIKRFIFFSI--LNA---------EQYPYIPLMKLKSDIEQKLK--KSGIPYTIFR 143 (317)
T ss_pred CccchhhhhHHHHHHHHHH-HHHcCCCEEEEecc--ccc---------cccCCChHHHHHHHHHHHHH--HcCCCeEEEe
Confidence 4556677788888888887 67889999987432 111 01111111122344566554 4689999999
Q ss_pred cCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcCCCee
Q 042656 94 SSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAF 173 (289)
Q Consensus 94 P~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~ge~F 173 (289)
|+.+|+...+.+ ..++ ..+.|+.. +|.. +..++++++++|++++.++.+|...|++|
T Consensus 144 p~~~~~~~~~~~---~~~~--------~~~~~~~~--------~~~~----~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ 200 (317)
T CHL00194 144 LAGFFQGLISQY---AIPI--------LEKQPIWI--------TNES----TPISYIDTQDAAKFCLKSLSLPETKNKTF 200 (317)
T ss_pred ecHHhhhhhhhh---hhhh--------ccCCceEe--------cCCC----CccCccCHHHHHHHHHHHhcCccccCcEE
Confidence 998775311100 1111 13556555 3332 55689999999999999998887889999
Q ss_pred EecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccchhhhhhhhcccccc
Q 042656 174 NCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQH 253 (289)
Q Consensus 174 Ni~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~f~d~~~~~~~~~ 253 (289)
||++++.+|++|+...+++.+|.+....+ .|..+.+.+. .|. +..++....-.++.. -.+++.+-+.
T Consensus 201 ni~g~~~~s~~el~~~~~~~~g~~~~~~~--vp~~~~~~~~----~~~---~~~~~~~~~~~~l~~----~~~~~~~~~~ 267 (317)
T CHL00194 201 PLVGPKSWNSSEIISLCEQLSGQKAKISR--VPLFLLKLLR----QIT---GFFEWTWNISDRLAF----VEILNTSNNF 267 (317)
T ss_pred EecCCCccCHHHHHHHHHHHhCCCCeEEe--CCHHHHHHHH----HHH---hhcccchhhHHHHHH----HHHHhcCCCc
Confidence 99999999999999999999998755321 4544443332 222 111111111111110 0112233355
Q ss_pred cccHHHHHhc-CCCC--CcChHHHHHHHHH
Q 042656 254 VSSMNKSREF-GFFG--FVDTMKSIRTWVK 280 (289)
Q Consensus 254 ~~d~~Kar~~-Gw~~--~~dt~e~~~~~~~ 280 (289)
..|.+++++. |+.| ..+.++.+.+.+.
T Consensus 268 ~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~ 297 (317)
T CHL00194 268 SSSMAELYKIFKIDPNELISLEDYFQEYFE 297 (317)
T ss_pred CCCHHHHHHHhCCChhhhhhHHHHHHHHHH
Confidence 6678899986 9998 4567777777665
No 48
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.28 E-value=6.6e-11 Score=105.28 Aligned_cols=218 Identities=17% Similarity=0.101 Sum_probs=150.7
Q ss_pred ccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCC--CCC-CChHHHHHHHHh-----
Q 042656 12 ISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRL--PFP-NFYYAVEDIAAS----- 82 (289)
Q Consensus 12 ~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~--p~p-~fyy~qEd~L~e----- 82 (289)
..-|.-.++.|+.---|+|.. +.-.|+|+.+.+- .-.|-+ ....|..|++--. |+| ||-|.--+.+.+
T Consensus 73 ~~ynldF~r~Nl~indNVlhs-a~e~gv~K~vsclStCIfPd--kt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~a 149 (315)
T KOG1431|consen 73 NTYNLDFIRKNLQINDNVLHS-AHEHGVKKVVSCLSTCIFPD--KTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQA 149 (315)
T ss_pred CCCchHHHhhcceechhHHHH-HHHhchhhhhhhcceeecCC--CCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHH
Confidence 344555666666555555555 7777888776422 212222 3468899998443 333 887776665554
Q ss_pred --cCCCceEEEeccCceeecCCC-ch-hhhHHHHHHHHH-HHHHhCC-CeEEEeccccCCCCCcccccccccccchHHHH
Q 042656 83 --YSPAVTYSVHRSSIIIGASSR-SL-NNSLLTLAVYAT-ICRHQGL-PFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLA 156 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V~G~~~g-n~-~nl~~~l~vyaa-l~~~~g~-pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la 156 (289)
.++||.++.+-|.+||||.++ |. -+.+++--++-. ..+..|. ++.. .|++. -+|.++++++||
T Consensus 150 Y~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~V--------wGsG~---PlRqFiys~DLA 218 (315)
T KOG1431|consen 150 YRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTV--------WGSGS---PLRQFIYSDDLA 218 (315)
T ss_pred HHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEE--------ecCCC---hHHHHhhHhHHH
Confidence 468999999999999999863 43 223333222222 2234566 7777 66664 799999999999
Q ss_pred HHHHHHhcCCCcCCCeeEecCCC--ccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccc
Q 042656 157 EQQIWAATTDRAKNQAFNCTNGD--VFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKM 234 (289)
Q Consensus 157 ~~~i~aa~~p~a~ge~FNi~dg~--~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l 234 (289)
+++||.+..= ..-|--|++.|+ .+|.+|+.+.+.+.+|..+..- | + -
T Consensus 219 ~l~i~vlr~Y-~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~----------~--------D------------t 267 (315)
T KOG1431|consen 219 DLFIWVLREY-EGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLV----------W--------D------------T 267 (315)
T ss_pred HHHHHHHHhh-cCccceEeccCccceeEHHHHHHHHHHHhCCCceEE----------e--------e------------c
Confidence 9999999643 223788898877 9999999999999999987641 1 1 0
Q ss_pred ccccchhhhhhhhcccccccccHHHHHhcCCCCCcC-hHHHHHHHHHHHHH
Q 042656 235 EEITCFEALNTVLHLQFQHVSSMNKSREFGFFGFVD-TMKSIRTWVKKLRE 284 (289)
Q Consensus 235 ~~l~~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~d-t~e~~~~~~~~lr~ 284 (289)
++ .| ..+.-.+|.+|.|++||.+..+ +++++.++.+||-+
T Consensus 268 tK------~D----Gq~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~Wy~~ 308 (315)
T KOG1431|consen 268 TK------SD----GQFKKTASNSKLRSLLPDFKFTPLEQAISETVQWYLD 308 (315)
T ss_pred cC------CC----CCcccccchHHHHHhCCCcccChHHHHHHHHHHHHHH
Confidence 11 01 1235578899999999999998 89999999999864
No 49
>PLN02686 cinnamoyl-CoA reductase
Probab=99.27 E-value=7.6e-11 Score=112.63 Aligned_cols=159 Identities=13% Similarity=0.115 Sum_probs=105.0
Q ss_pred hhhccChHHHHHhhhhHhhhccCceeecccc---cccCccCCCC--CCCCCCCCCC----CCCCChHHHHHHHHh-----
Q 042656 17 LTVGASSRSLHNSLLPLAVHTNICKYQGLPF---RYFGQLIGHD--PPFKEDSVRL----PFPNFYYAVEDIAAS----- 82 (289)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~---~~~g~~~~~~--~P~~E~~pr~----p~p~fyy~qEd~L~e----- 82 (289)
.....|+.++.+.++......|+|+.+..+. ..||...+.. .+++|+++.. +.|...|...|...|
T Consensus 150 ~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~ 229 (367)
T PLN02686 150 SMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWR 229 (367)
T ss_pred hhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHH
Confidence 3456789999999998443348998876553 3455310111 3467765332 123444776555554
Q ss_pred --cCCCceEEEeccCceeecCCC--chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHH
Q 042656 83 --YSPAVTYSVHRSSIIIGASSR--SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQ 158 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V~G~~~g--n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~ 158 (289)
+..+++++++||++|||+... +...+. ..+ .|. +++ .|++ ..++++++++|++
T Consensus 230 ~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~------~~~---~g~-~~~--------~g~g-----~~~~v~V~Dva~A 286 (367)
T PLN02686 230 AARGKGLKLATICPALVTGPGFFRRNSTATI------AYL---KGA-QEM--------LADG-----LLATADVERLAEA 286 (367)
T ss_pred HHHhcCceEEEEcCCceECCCCCCCCChhHH------HHh---cCC-Ccc--------CCCC-----CcCeEEHHHHHHH
Confidence 346899999999999999742 211111 111 343 444 4443 2358899999999
Q ss_pred HHHHhcCC--CcCCCeeEecCCCccCHHHHHHHHHHHhCCCCC
Q 042656 159 QIWAATTD--RAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFV 199 (289)
Q Consensus 159 ~i~aa~~p--~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~ 199 (289)
++.|+..+ ...++.| |++|+.+|++++...|++.+|.+..
T Consensus 287 ~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~ 328 (367)
T PLN02686 287 HVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPIN 328 (367)
T ss_pred HHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCC
Confidence 99999753 2457789 8888999999999999999997643
No 50
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.26 E-value=1.1e-09 Score=102.02 Aligned_cols=237 Identities=12% Similarity=0.079 Sum_probs=135.0
Q ss_pred hccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCC---CCCChHHHHHHHHh------cCCCce
Q 042656 19 VGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLP---FPNFYYAVEDIAAS------YSPAVT 88 (289)
Q Consensus 19 ~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p---~p~fyy~qEd~L~e------~~~g~~ 88 (289)
...|+.++.+.++. +...+.|++..++ ...++. ....+..|+++..+ .+..-|.+.+...| ...++.
T Consensus 109 ~~~nv~g~~~ll~~-a~~~~~~~~v~iSS~~v~~~--~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~ 185 (367)
T TIGR01746 109 RAANVLGTREVLRL-AASGRAKPLHYVSTISVLAA--IDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLP 185 (367)
T ss_pred hhhhhHHHHHHHHH-HhhCCCceEEEEccccccCC--cCCCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCC
Confidence 45888999888877 6778888666545 444543 11233456665432 11233666555444 335999
Q ss_pred EEEeccCceeecCC-C--chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcC
Q 042656 89 YSVHRSSIIIGASS-R--SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATT 165 (289)
Q Consensus 89 ~~ivRP~~V~G~~~-g--n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~ 165 (289)
++++||+.|||+.. + +..+....+ ..-|...|. + |.... ...++++++.+|++++.++..
T Consensus 186 ~~i~Rpg~v~G~~~~g~~~~~~~~~~~---~~~~~~~~~---~--------p~~~~---~~~~~~~vddva~ai~~~~~~ 248 (367)
T TIGR01746 186 VTIVRPGRILGNSYTGAINSSDILWRM---VKGCLALGA---Y--------PDSPE---LTEDLTPVDYVARAIVALSSQ 248 (367)
T ss_pred EEEECCCceeecCCCCCCCchhHHHHH---HHHHHHhCC---C--------CCCCc---cccCcccHHHHHHHHHHHHhC
Confidence 99999999999743 2 212221111 111122331 2 32221 356789999999999999987
Q ss_pred CCcC--CCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhC-CCccccccccchhh
Q 042656 166 DRAK--NQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHG-LYKTKMEEITCFEA 242 (289)
Q Consensus 166 p~a~--ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~g-l~~~~l~~l~~w~f 242 (289)
+... +++|||++++.+||+++.+.|++ +|.+... +++.+|+..... ...+.+ ....++..+ |.+
T Consensus 249 ~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~------~~~~~w~~~~~~----~~~~~~~~~~~~~~~~--~~~ 315 (367)
T TIGR01746 249 PAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKL------VSFDEWLQRLED----SDTAKRDPPRYPLLPL--LHF 315 (367)
T ss_pred CCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCc------CCHHHHHHHHHH----hhhcCCCcccccchhh--hhc
Confidence 7642 89999999999999999999999 7875432 334455442111 111110 000111111 111
Q ss_pred hhhhhcc-c-ccccccHHHHHh----cCCCCCcChHHHHHHHHHHHHHCCCC
Q 042656 243 LNTVLHL-Q-FQHVSSMNKSRE----FGFFGFVDTMKSIRTWVKKLREMKII 288 (289)
Q Consensus 243 ~d~~~~~-~-~~~~~d~~Kar~----~Gw~~~~dt~e~~~~~~~~lr~~~ii 288 (289)
....+.. . -...++.+++++ +|...+.-..+-+.++++.+++.+.|
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (367)
T TIGR01746 316 LGAGFEEPEFDTRNLDSRSTAEALEGDGIREPSITAPLLHLYLQYLKEIGFL 367 (367)
T ss_pred cCCCcccccccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 1100000 0 023556666644 36555545567788899988887654
No 51
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.21 E-value=1.7e-10 Score=108.17 Aligned_cols=188 Identities=12% Similarity=0.096 Sum_probs=127.2
Q ss_pred CcccccCCchhhccChHHHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-----
Q 042656 8 YTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS----- 82 (289)
Q Consensus 8 v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e----- 82 (289)
++.+-.+|...+.+|+.++.+.++. +..+|.++...++. ..| .. |...|...+...|
T Consensus 87 ~~~~~~~~~~~~~~Nv~g~~~ll~a-a~~~~~~~iV~~SS---------~~~------~~--p~~~Y~~sK~~~E~l~~~ 148 (324)
T TIGR03589 87 VPAAEYNPFECIRTNINGAQNVIDA-AIDNGVKRVVALST---------DKA------AN--PINLYGATKLASDKLFVA 148 (324)
T ss_pred CchhhcCHHHHHHHHHHHHHHHHHH-HHHcCCCEEEEEeC---------CCC------CC--CCCHHHHHHHHHHHHHHH
Confidence 4555667888999999999999999 55678877766331 111 11 2333665554444
Q ss_pred -----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCC-CeEEEeccccCCCCCcccccccccccchHHHH
Q 042656 83 -----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGL-PFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLA 156 (289)
Q Consensus 83 -----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~-pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la 156 (289)
...++.++++||++|||+.. ++... ..... ..|. +++. .+ + .+.+++++++++|
T Consensus 149 ~~~~~~~~gi~~~~lR~g~v~G~~~-~~i~~----~~~~~---~~~~~~~~i--------~~-~---~~~r~~i~v~D~a 208 (324)
T TIGR03589 149 ANNISGSKGTRFSVVRYGNVVGSRG-SVVPF----FKSLK---EEGVTELPI--------TD-P---RMTRFWITLEQGV 208 (324)
T ss_pred HHhhccccCcEEEEEeecceeCCCC-CcHHH----HHHHH---HhCCCCeee--------CC-C---CceEeeEEHHHHH
Confidence 24689999999999999863 32222 12111 2454 6777 32 2 3788999999999
Q ss_pred HHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccccc
Q 042656 157 EQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEE 236 (289)
Q Consensus 157 ~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~ 236 (289)
++++.++.++ ..+++|| ..+..+|..++...+++.++.+..+.. +-+.
T Consensus 209 ~a~~~al~~~-~~~~~~~-~~~~~~sv~el~~~i~~~~~~~~~~~~------------------------------~g~~ 256 (324)
T TIGR03589 209 NFVLKSLERM-LGGEIFV-PKIPSMKITDLAEAMAPECPHKIVGIR------------------------------PGEK 256 (324)
T ss_pred HHHHHHHhhC-CCCCEEc-cCCCcEEHHHHHHHHHhhCCeeEeCCC------------------------------CCch
Confidence 9999999764 3578895 667789999999999986544322110 0000
Q ss_pred ccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHH
Q 042656 237 ITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTW 278 (289)
Q Consensus 237 l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~ 278 (289)
......|.+|+++. ||.|.+++.+++..+
T Consensus 257 -------------~~~~~~~~~~~~~~lg~~~~~~l~~~~~~~ 286 (324)
T TIGR03589 257 -------------LHEVMITEDDARHTYELGDYYAILPSISFW 286 (324)
T ss_pred -------------hHhhhcChhhhhhhcCCCCeEEEccccccc
Confidence 01356799999884 999999999887643
No 52
>PLN02778 3,5-epimerase/4-reductase
Probab=99.19 E-value=1.2e-09 Score=101.55 Aligned_cols=215 Identities=12% Similarity=-0.008 Sum_probs=136.2
Q ss_pred cccccCCchhhccChHHHHHhhhhHhhhccCceeecccccccCccC--C--CCCCCCCCCCCCCCCCChHHHHHHHHhc-
Q 042656 9 TGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLI--G--HDPPFKEDSVRLPFPNFYYAVEDIAASY- 83 (289)
Q Consensus 9 ~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~--~--~~~P~~E~~pr~p~p~fyy~qEd~L~e~- 83 (289)
.++..+|...+.+|+.++.+.++. +...|+|.....+...||... + ...|++|++++.+ |...|.+.|.+.|.
T Consensus 74 ~~~~~~p~~~~~~Nv~gt~~ll~a-a~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~-~~s~Yg~sK~~~E~~ 151 (298)
T PLN02778 74 DWCESHKVETIRANVVGTLTLADV-CRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNF-TGSFYSKTKAMVEEL 151 (298)
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHH-HHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCC-CCCchHHHHHHHHHH
Confidence 456789999999999999999988 667788865442344554310 1 1236888876442 34568888887771
Q ss_pred -CCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHH
Q 042656 84 -SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWA 162 (289)
Q Consensus 84 -~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~a 162 (289)
..--...++|+..++|+..+...+++..+ -.+.++.. -+ .+++++++++++++.+
T Consensus 152 ~~~y~~~~~lr~~~~~~~~~~~~~~fi~~~--------~~~~~~~~--------~~--------~s~~yv~D~v~al~~~ 207 (298)
T PLN02778 152 LKNYENVCTLRVRMPISSDLSNPRNFITKI--------TRYEKVVN--------IP--------NSMTILDELLPISIEM 207 (298)
T ss_pred HHHhhccEEeeecccCCcccccHHHHHHHH--------HcCCCeeE--------cC--------CCCEEHHHHHHHHHHH
Confidence 11125678999888887543222222111 14555444 11 2678889999999888
Q ss_pred hcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccchhh
Q 042656 163 ATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCFEA 242 (289)
Q Consensus 163 a~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~f 242 (289)
+... .+++|||++++.+|+.|+...|++.+|....- ..+.+.+. ... .+
T Consensus 208 l~~~--~~g~yNigs~~~iS~~el~~~i~~~~~~~~~~----~~~~i~~~----~~~-------------~~-------- 256 (298)
T PLN02778 208 AKRN--LTGIYNFTNPGVVSHNEILEMYRDYIDPSFTW----KNFTLEEQ----AKV-------------IV-------- 256 (298)
T ss_pred HhCC--CCCeEEeCCCCcccHHHHHHHHHHHhCCCcee----ccccHHHH----HHH-------------Hh--------
Confidence 7643 24699999999999999999999999964210 11111100 000 00
Q ss_pred hhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHHCC
Q 042656 243 LNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLREMK 286 (289)
Q Consensus 243 ~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~~~ 286 (289)
.......+|.+|++++ += -..+..++++..++.+++.+
T Consensus 257 -----~~~~~~~Ld~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 295 (298)
T PLN02778 257 -----APRSNNELDTTKLKREFPE-LLPIKESLIKYVFEPNKKTK 295 (298)
T ss_pred -----CCCccccccHHHHHHhccc-ccchHHHHHHHHHHHHHhhh
Confidence 1111346899999986 32 22345788888888887654
No 53
>PLN02996 fatty acyl-CoA reductase
Probab=99.15 E-value=2.3e-10 Score=113.64 Aligned_cols=173 Identities=11% Similarity=0.128 Sum_probs=116.3
Q ss_pred cCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCC--CCCCCCCCC-------------------------
Q 042656 13 SDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIG--HDPPFKEDS------------------------- 64 (289)
Q Consensus 13 ~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~--~~~P~~E~~------------------------- 64 (289)
.+|.....+|+.++.+.|+......+.|++..+| ..++|.... .+.|+.+..
T Consensus 127 ~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (491)
T PLN02996 127 ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELN 206 (491)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHH
Confidence 5778889999999999998833334788877666 556665210 122222100
Q ss_pred -------------------C--CCCCCCChHHHHHHHHh-----cCCCceEEEeccCceeecCCCch---h-hhHHHHHH
Q 042656 65 -------------------V--RLPFPNFYYAVEDIAAS-----YSPAVTYSVHRSSIIIGASSRSL---N-NSLLTLAV 114 (289)
Q Consensus 65 -------------------p--r~p~p~fyy~qEd~L~e-----~~~g~~~~ivRP~~V~G~~~gn~---~-nl~~~l~v 114 (289)
| ....|| -|...|.++| ...+++.+|+||++|||+....+ . ++...-++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~pn-~Y~~TK~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i 285 (491)
T PLN02996 207 EQDASEEEITQAMKDLGMERAKLHGWPN-TYVFTKAMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSV 285 (491)
T ss_pred hhcCCHHHHHHHhhhhchhHHHhCCCCC-chHhhHHHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHH
Confidence 0 011234 3666666666 34589999999999999853111 0 11111111
Q ss_pred HHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCC--C-cCCCeeEecCC--CccCHHHHHHH
Q 042656 115 YATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTD--R-AKNQAFNCTNG--DVFTWKSLWKL 189 (289)
Q Consensus 115 yaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p--~-a~ge~FNi~dg--~~~s~~~lw~~ 189 (289)
..++ ..|.+..+ +|++. +.+|++++|++|++++.|+.++ . ..+++|||++| .++||.++...
T Consensus 286 ~~~~--~~g~~~~~--------~gdg~---~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~ 352 (491)
T PLN02996 286 IVGY--GKGKLTCF--------LADPN---SVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDF 352 (491)
T ss_pred HHHh--ccceEeEE--------ecCCC---eecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHH
Confidence 1111 35777778 88875 9999999999999999998753 2 24689999998 89999999999
Q ss_pred HHHHhCCCCC
Q 042656 190 LSEIFDVEFV 199 (289)
Q Consensus 190 la~~~G~~~~ 199 (289)
+.++++..+.
T Consensus 353 ~~~~~~~~p~ 362 (491)
T PLN02996 353 AYRYFSKNPW 362 (491)
T ss_pred HHHHhhhCCC
Confidence 9999986553
No 54
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.12 E-value=1.9e-09 Score=98.81 Aligned_cols=237 Identities=16% Similarity=0.158 Sum_probs=152.1
Q ss_pred ccccCcccccCCchhhccChHHHHHhhhhHhhhcc--CceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042656 4 CEIHYTGPISDPSLTVGASSRSLHNSLLPLAVHTN--ICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAA 81 (289)
Q Consensus 4 ~~~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG--~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~ 81 (289)
|..+|.-|+++|..+..++..|+.+.|+.+-+..+ +|-|...+++.||. -...|.+|+.|-.| .+.|+.-+.-+
T Consensus 87 AQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~--v~~~pq~E~TPFyP--rSPYAvAKlYa 162 (345)
T COG1089 87 AQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGL--VQEIPQKETTPFYP--RSPYAVAKLYA 162 (345)
T ss_pred ccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcC--cccCccccCCCCCC--CCHHHHHHHHH
Confidence 56779999999999999999999999999666544 56676634888997 45899999999885 33399888766
Q ss_pred h-------cCCCceEEEeccCceeecCCC-chhhhHHHHHHHHHHHH-HhCCC--eEEEeccccCCCCCccccccccccc
Q 042656 82 S-------YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICR-HQGLP--FRYLAIHGSSLSGNKYTWEHFCDMS 150 (289)
Q Consensus 82 e-------~~~g~~~~ivRP~~V~G~~~g-n~~nl~~~l~vyaal~~-~~g~p--l~f~~~~~~~~pG~~~~~~~~~~~~ 150 (289)
- ++.|+--|.=+-++==+|..| .|-.. -|-.++++ +.|.. |.. ||. ++.||+.
T Consensus 163 ~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTR----KIt~ava~Ik~G~q~~l~l---------GNl---dAkRDWG 226 (345)
T COG1089 163 YWITVNYRESYGLFACNGILFNHESPLRGETFVTR----KITRAVARIKLGLQDKLYL---------GNL---DAKRDWG 226 (345)
T ss_pred HheeeehHhhcCceeecceeecCCCCCCccceehH----HHHHHHHHHHccccceEEe---------ccc---ccccccc
Confidence 4 344554443332332233323 33222 22333332 34543 444 665 3999999
Q ss_pred chHHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCC
Q 042656 151 DSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLY 230 (289)
Q Consensus 151 ~~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~ 230 (289)
++..-++++-..+..+ ..+.|+|+.|+..|.+++...-.+..|++..--. +...++.- -.+-|=.
T Consensus 227 ~A~DYVe~mwlmLQq~--~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g--------~g~~e~g~-----da~~G~~ 291 (345)
T COG1089 227 HAKDYVEAMWLMLQQE--EPDDYVIATGETHSVREFVELAFEMVGIDLEWEG--------TGVDEKGV-----DAKTGKI 291 (345)
T ss_pred chHHHHHHHHHHHccC--CCCceEEecCceeeHHHHHHHHHHHcCceEEEee--------cccccccc-----ccccCce
Confidence 9999999966555554 4789999999999999999999999996654211 01111100 0000000
Q ss_pred ccccccccchhhhhhhhcccccccccHHHHHh-cCCCCCcChHHHHHHHHHH
Q 042656 231 KTKMEEITCFEALNTVLHLQFQHVSSMNKSRE-FGFFGFVDTMKSIRTWVKK 281 (289)
Q Consensus 231 ~~~l~~l~~w~f~d~~~~~~~~~~~d~~Kar~-~Gw~~~~dt~e~~~~~~~~ 281 (289)
.-.++.. -+.-.+ .--+..|.+||++ +||.|.++++|-+..+++.
T Consensus 292 ~V~idp~-~fRPaE-----V~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~ 337 (345)
T COG1089 292 IVEIDPR-YFRPAE-----VDLLLGDPTKAKEKLGWRPEVSLEELVREMVEA 337 (345)
T ss_pred eEEECcc-ccCchh-----hhhhcCCHHHHHHHcCCccccCHHHHHHHHHHH
Confidence 0000000 000000 1135789999996 6999999999988888873
No 55
>PLN02583 cinnamoyl-CoA reductase
Probab=99.06 E-value=2.2e-09 Score=99.41 Aligned_cols=155 Identities=19% Similarity=0.128 Sum_probs=102.8
Q ss_pred CchhhccChHHHHHhhhhHhhhccCceeeccc-ccc--cCcc-CCCCCCCCCCCCCCCC----CCChHHHHHHHHh----
Q 042656 15 PSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRY--FGQL-IGHDPPFKEDSVRLPF----PNFYYAVEDIAAS---- 82 (289)
Q Consensus 15 p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~--~g~~-~~~~~P~~E~~pr~p~----p~fyy~qEd~L~e---- 82 (289)
+...+.+|+.++.+.++.+.-..++|+.+.++ ... +++. .....|++|+++..+. +...|...|.+.|
T Consensus 96 ~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~ 175 (297)
T PLN02583 96 DEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAW 175 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHH
Confidence 34567899999999999844333678877655 222 2310 0123468888764321 1124776666555
Q ss_pred ---cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHH
Q 042656 83 ---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQ 159 (289)
Q Consensus 83 ---~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~ 159 (289)
+..+++++++||+.|||+........ + .+.+..+ ++ ...++++++++|+++
T Consensus 176 ~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~---~---------~~~~~~~--------~~------~~~~~v~V~Dva~a~ 229 (297)
T PLN02583 176 ALAMDRGVNMVSINAGLLMGPSLTQHNPY---L---------KGAAQMY--------EN------GVLVTVDVNFLVDAH 229 (297)
T ss_pred HHHHHhCCcEEEEcCCcccCCCCCCchhh---h---------cCCcccC--------cc------cCcceEEHHHHHHHH
Confidence 24689999999999999975211110 0 2333223 22 234588999999999
Q ss_pred HHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCC
Q 042656 160 IWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDV 196 (289)
Q Consensus 160 i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~ 196 (289)
+.|+++|.+.+ .|++++++...|.++.+.+.+.|.-
T Consensus 230 ~~al~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 230 IRAFEDVSSYG-RYLCFNHIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred HHHhcCcccCC-cEEEecCCCccHHHHHHHHHHhCCC
Confidence 99999887666 7999998887888899988887764
No 56
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.97 E-value=1.2e-08 Score=104.54 Aligned_cols=208 Identities=13% Similarity=0.023 Sum_probs=131.9
Q ss_pred CcccccCCchhhccChHHHHHhhhhHhhhccCceeecccccccCcc--C--CCCCCCCCCCCCCCCCCChHHHHHHHHh-
Q 042656 8 YTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQL--I--GHDPPFKEDSVRLPFPNFYYAVEDIAAS- 82 (289)
Q Consensus 8 v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~--~--~~~~P~~E~~pr~p~p~fyy~qEd~L~e- 82 (289)
+.++..+|.....+|+.++.+.++. +...|+|.....+...||-. . ....|++|+++..| |...|...|...|
T Consensus 444 ~~~~~~~~~~~~~~N~~gt~~l~~a-~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~-~~~~Yg~sK~~~E~ 521 (668)
T PLN02260 444 VDWCESHKVETIRANVVGTLTLADV-CRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNF-TGSFYSKTKAMVEE 521 (668)
T ss_pred CChHHhCHHHHHHHHhHHHHHHHHH-HHHcCCeEEEEcccceecCCcccccccCCCCCcCCCCCC-CCChhhHHHHHHHH
Confidence 5567789999999999999999998 66788876544234455310 0 11358999886543 3455777777776
Q ss_pred --cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHH
Q 042656 83 --YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQI 160 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i 160 (289)
... -.+.++|...+||....+..|++..+. +.+.++.+ |. ++.+.++++++++
T Consensus 522 ~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~-------~~~~~~~v--------p~---------~~~~~~~~~~~~~ 576 (668)
T PLN02260 522 LLREY-DNVCTLRVRMPISSDLSNPRNFITKIS-------RYNKVVNI--------PN---------SMTVLDELLPISI 576 (668)
T ss_pred HHHhh-hhheEEEEEEecccCCCCccHHHHHHh-------ccceeecc--------CC---------CceehhhHHHHHH
Confidence 122 357788888899765322223333220 22334555 43 2455566777767
Q ss_pred HHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccch
Q 042656 161 WAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCF 240 (289)
Q Consensus 161 ~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w 240 (289)
.++.. ..+.+|||+|++.+||.|+...|++.+|..... .|++..++.. .. ...
T Consensus 577 ~l~~~--~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~----~~~~~~~~~~-~~----------------~a~---- 629 (668)
T PLN02260 577 EMAKR--NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKW----SNFTLEEQAK-VI----------------VAP---- 629 (668)
T ss_pred HHHHh--CCCceEEecCCCcCcHHHHHHHHHHhcCCcccc----cccCHHHhhh-Hh----------------hCC----
Confidence 66653 235899999999999999999999988421111 4444444321 00 100
Q ss_pred hhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHH
Q 042656 241 EALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVK 280 (289)
Q Consensus 241 ~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~ 280 (289)
++.. .+|.+|+++. |+ ..+..+++.+.+.
T Consensus 630 --------rp~~-~l~~~k~~~~~~~--~~~~~~~l~~~~~ 659 (668)
T PLN02260 630 --------RSNN-EMDASKLKKEFPE--LLSIKESLIKYVF 659 (668)
T ss_pred --------Cccc-cccHHHHHHhCcc--ccchHHHHHHHHh
Confidence 1224 7899999995 87 5678888887764
No 57
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=98.88 E-value=1.1e-07 Score=89.29 Aligned_cols=211 Identities=20% Similarity=0.247 Sum_probs=135.2
Q ss_pred hhhccChHHHHHhhhhHhhhccCceeeccc-ccccC---ccCCCCCCCCCCCCCCCCCC------ChHHHHHHHHh----
Q 042656 17 LTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFG---QLIGHDPPFKEDSVRLPFPN------FYYAVEDIAAS---- 82 (289)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g---~~~~~~~P~~E~~pr~p~p~------fyy~qEd~L~e---- 82 (289)
..+.-.+.|+.|.|+.+.-...+|+.+..| ..... +.......++|++=.. +. -.|...+.|+|
T Consensus 99 ~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd--~~~~~~~~~~Y~~sK~lAEkaAw 176 (327)
T KOG1502|consen 99 ELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSD--LDFCRCKKLWYALSKTLAEKAAW 176 (327)
T ss_pred hhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCc--HHHHHhhHHHHHHHHHHHHHHHH
Confidence 678889999999999944444499998755 22221 1111233445544222 11 24666566665
Q ss_pred ---cCCCceEEEeccCceeecCCC-chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHH
Q 042656 83 ---YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQ 158 (289)
Q Consensus 83 ---~~~g~~~~ivRP~~V~G~~~g-n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~ 158 (289)
+..++..+++-|++|+||... +..+.+..+ +++ -.|.-=.+ ++. ..-++++++||++
T Consensus 177 ~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~---l~~--i~G~~~~~--------~n~------~~~~VdVrDVA~A 237 (327)
T KOG1502|consen 177 EFAKENGLDLVTINPGLVFGPGLQPSLNSSLNAL---LKL--IKGLAETY--------PNF------WLAFVDVRDVALA 237 (327)
T ss_pred HHHHhCCccEEEecCCceECCCcccccchhHHHH---HHH--HhcccccC--------CCC------ceeeEeHHHHHHH
Confidence 567899999999999999753 222211111 111 13543334 332 2227788889999
Q ss_pred HHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCcccccccc
Q 042656 159 QIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEIT 238 (289)
Q Consensus 159 ~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~ 238 (289)
++.|.+.|.|.|+ |.+.++.. +++++...|.+.|-.-..+.. .+ ... .
T Consensus 238 Hv~a~E~~~a~GR-yic~~~~~-~~~ei~~~l~~~~P~~~ip~~--~~-------------------------~~~-~-- 285 (327)
T KOG1502|consen 238 HVLALEKPSAKGR-YICVGEVV-SIKEIADILRELFPDYPIPKK--NA-------------------------EEH-E-- 285 (327)
T ss_pred HHHHHcCcccCce-EEEecCcc-cHHHHHHHHHHhCCCCCCCCC--CC-------------------------ccc-c--
Confidence 9999999988865 66665554 499998888887765442110 00 000 0
Q ss_pred chhhhhhhhcccccccccHHHHHhcCCCCCcChHHHHHHHHHHHHHCCCCC
Q 042656 239 CFEALNTVLHLQFQHVSSMNKSREFGFFGFVDTMKSIRTWVKKLREMKIIP 289 (289)
Q Consensus 239 ~w~f~d~~~~~~~~~~~d~~Kar~~Gw~~~~dt~e~~~~~~~~lr~~~iiP 289 (289)
+......+|.+|++++||.....+.|++.+++..|++.+.++
T Consensus 286 ---------~~~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~~~~~l~ 327 (327)
T KOG1502|consen 286 ---------GFLTSFKVSSEKLKSLGGFKFRPLEETLSDTVESLREKGLLL 327 (327)
T ss_pred ---------ccccccccccHHHHhcccceecChHHHHHHHHHHHHHhcCCC
Confidence 000133688999999999999999999999999999999875
No 58
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.76 E-value=5.9e-08 Score=93.68 Aligned_cols=147 Identities=15% Similarity=0.077 Sum_probs=100.2
Q ss_pred hhccChHHHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHhcCCCceEEEeccCce
Q 042656 18 TVGASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAASYSPAVTYSVHRSSII 97 (289)
Q Consensus 18 ~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e~~~g~~~~ivRP~~V 97 (289)
....|..++.+.++. +...|+|++..++.. +. ..|. .+........|+.|.+...+++|+|+||+.+
T Consensus 154 ~~~vn~~~~~~ll~a-a~~~gv~r~V~iSS~--~v----~~p~------~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~ 220 (390)
T PLN02657 154 SWKIDYQATKNSLDA-GREVGAKHFVLLSAI--CV----QKPL------LEFQRAKLKFEAELQALDSDFTYSIVRPTAF 220 (390)
T ss_pred chhhHHHHHHHHHHH-HHHcCCCEEEEEeec--cc----cCcc------hHHHHHHHHHHHHHHhccCCCCEEEEccHHH
Confidence 345677888888887 678899998874421 10 1111 1000111233555543347899999999999
Q ss_pred eecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccc-cccchHHHHHHHHHHhcCCCcCCCeeEec
Q 042656 98 IGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFC-DMSDSRVLAEQQIWAATTDRAKNQAFNCT 176 (289)
Q Consensus 98 ~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~-~~~~~~~la~~~i~aa~~p~a~ge~FNi~ 176 (289)
||...+ .+.. + ..|.|+.+ .|++. ..+ +.++++++|++++.|+..+...|++|||+
T Consensus 221 ~~~~~~-~~~~---------~--~~g~~~~~--------~GdG~---~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Ig 277 (390)
T PLN02657 221 FKSLGG-QVEI---------V--KDGGPYVM--------FGDGK---LCACKPISEADLASFIADCVLDESKINKVLPIG 277 (390)
T ss_pred hcccHH-HHHh---------h--ccCCceEE--------ecCCc---ccccCceeHHHHHHHHHHHHhCccccCCEEEcC
Confidence 974221 1111 1 35888877 66653 333 56899999999999998887789999999
Q ss_pred CC-CccCHHHHHHHHHHHhCCCCCC
Q 042656 177 NG-DVFTWKSLWKLLSEIFDVEFVP 200 (289)
Q Consensus 177 dg-~~~s~~~lw~~la~~~G~~~~~ 200 (289)
+. +.+|+.|+...|++.+|.+...
T Consensus 278 gp~~~~S~~Eia~~l~~~lG~~~~~ 302 (390)
T PLN02657 278 GPGKALTPLEQGEMLFRILGKEPKF 302 (390)
T ss_pred CCCcccCHHHHHHHHHHHhCCCCce
Confidence 74 6999999999999999986543
No 59
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.69 E-value=1.3e-06 Score=96.16 Aligned_cols=245 Identities=13% Similarity=0.041 Sum_probs=136.4
Q ss_pred CCchhh-ccChHHHHHhhhhHhhhccCceeeccc-ccccCccC----------CCCCCCCCCCCCCC---CCCChHHHHH
Q 042656 14 DPSLTV-GASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLI----------GHDPPFKEDSVRLP---FPNFYYAVED 78 (289)
Q Consensus 14 ~p~~~~-~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~----------~~~~P~~E~~pr~p---~p~fyy~qEd 78 (289)
.|...+ ..|+.++.+.|+. +...+.|+...+| ...+|... ....+..|+++..+ .+..-|.+.|
T Consensus 1076 ~~~~~~~~~nv~gt~~ll~~-a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK 1154 (1389)
T TIGR03443 1076 YPYSKLRDANVIGTINVLNL-CAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSK 1154 (1389)
T ss_pred cCHHHHHHhHHHHHHHHHHH-HHhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHH
Confidence 344444 3699999999998 5677888776655 44554200 00123444443221 1223377766
Q ss_pred HHHh------cCCCceEEEeccCceeecCC-CchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccc
Q 042656 79 IAAS------YSPAVTYSVHRSSIIIGASS-RSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSD 151 (289)
Q Consensus 79 ~L~e------~~~g~~~~ivRP~~V~G~~~-gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~ 151 (289)
.+.| ...++.++|+||+.|||+.. +.. +....+.....-|...|. + |.. ...+|+++
T Consensus 1155 ~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~-~~~~~~~~~~~~~~~~~~---~--------p~~----~~~~~~~~ 1218 (1389)
T TIGR03443 1155 WVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGAT-NTDDFLLRMLKGCIQLGL---I--------PNI----NNTVNMVP 1218 (1389)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCccccCCCcCCC-CchhHHHHHHHHHHHhCC---c--------CCC----CCcccccc
Confidence 6665 34589999999999999964 321 111111111111112231 2 211 14688999
Q ss_pred hHHHHHHHHHHhcCCCc--CCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCC
Q 042656 152 SRVLAEQQIWAATTDRA--KNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGL 229 (289)
Q Consensus 152 ~~~la~~~i~aa~~p~a--~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl 229 (289)
++.+|++++.++.++.. .+.+||+.++..++|.+++..|.+. |.+.. ..+..+|....... ....+
T Consensus 1219 Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~------~~~~~~w~~~l~~~----~~~~~- 1286 (1389)
T TIGR03443 1219 VDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVE------IVDYVHWRKSLERF----VIERS- 1286 (1389)
T ss_pred HHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCC------ccCHHHHHHHHHHh----ccccC-
Confidence 99999999999887643 3579999999999999999999764 55432 23344554422110 00000
Q ss_pred Cccccccccchhhhhhhhcc-cccccccHHHHHhc-C----C---CCC---cChHHHHHHHHHHHHHCCCCC
Q 042656 230 YKTKMEEITCFEALNTVLHL-QFQHVSSMNKSREF-G----F---FGF---VDTMKSIRTWVKKLREMKIIP 289 (289)
Q Consensus 230 ~~~~l~~l~~w~f~d~~~~~-~~~~~~d~~Kar~~-G----w---~~~---~dt~e~~~~~~~~lr~~~iiP 289 (289)
...++..+..+ |.+. +.. .....+|.+++++. . + +.. .-..+-+.++++.+++.+.||
T Consensus 1287 ~~~~~~~l~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1356 (1389)
T TIGR03443 1287 EDNALFPLLHF-VLDD-LPQSTKAPELDDTNAATSLKADAAWTGVDVSSGAGVTEEQIGIYIAYLVKVGFLP 1356 (1389)
T ss_pred ccchhhhHHHH-hhcc-CcccccCCCCCCHHHHHHHHhhcccccCCCcCCCCCCHHHHHHHHHHHHHCCCCC
Confidence 11122121111 0000 011 11456788888874 3 3 222 234567888999999888775
No 60
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.61 E-value=2.5e-06 Score=78.34 Aligned_cols=202 Identities=13% Similarity=0.086 Sum_probs=137.7
Q ss_pred ChHHHHHhhhhHh-hhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh------cCCCceEEEec
Q 042656 22 SSRSLHNSLLPLA-VHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS------YSPAVTYSVHR 93 (289)
Q Consensus 22 ~~~~~~~~l~~~~-l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e------~~~g~~~~ivR 93 (289)
=...|...++.|. ..+.-|.....| ...||. ....+++|++|.. +.+.+|--.-+| +..+..++++|
T Consensus 85 Ri~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~--~~~~~~tE~~~~g---~~Fla~lc~~WE~~a~~a~~~gtRvvllR 159 (297)
T COG1090 85 RINTTEKLVELIAASETKPKVLISASAVGYYGH--SGDRVVTEESPPG---DDFLAQLCQDWEEEALQAQQLGTRVVLLR 159 (297)
T ss_pred HhHHHHHHHHHHHhccCCCcEEEecceEEEecC--CCceeeecCCCCC---CChHHHHHHHHHHHHhhhhhcCceEEEEE
Confidence 3445555556654 356666665545 567786 5678999997632 445554333333 45689999999
Q ss_pred cCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcCCCee
Q 042656 94 SSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAF 173 (289)
Q Consensus 94 P~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~ge~F 173 (289)
-++|.|+.-|.+-.+..+. +.|+=-+| |+++ +-.+++..+++++++.++.++++..| .|
T Consensus 160 tGvVLs~~GGaL~~m~~~f--------k~glGG~~---------GsGr---Q~~SWIhieD~v~~I~fll~~~~lsG-p~ 218 (297)
T COG1090 160 TGVVLSPDGGALGKMLPLF--------KLGLGGKL---------GSGR---QWFSWIHIEDLVNAILFLLENEQLSG-PF 218 (297)
T ss_pred EEEEecCCCcchhhhcchh--------hhccCCcc---------CCCC---ceeeeeeHHHHHHHHHHHHhCcCCCC-cc
Confidence 9999998766443332222 23333444 5555 77888899999999999999998877 89
Q ss_pred EecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHHHHhCCCccccccccchhhhhhhhcccccc
Q 042656 174 NCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIVEKHGLYKTKMEEITCFEALNTVLHLQFQH 253 (289)
Q Consensus 174 Ni~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~~k~gl~~~~l~~l~~w~f~d~~~~~~~~~ 253 (289)
|.+-..+++-+++-..|++.++.+...+ .|-.+.+.+.+-. ++.++. .+
T Consensus 219 N~taP~PV~~~~F~~al~r~l~RP~~~~---vP~~~~rl~LGe~-------------------------a~~lL~---gQ 267 (297)
T COG1090 219 NLTAPNPVRNKEFAHALGRALHRPAILP---VPSFALRLLLGEM-------------------------ADLLLG---GQ 267 (297)
T ss_pred cccCCCcCcHHHHHHHHHHHhCCCcccc---CcHHHHHHHhhhh-------------------------HHHHhc---cc
Confidence 9999999999999999999999887754 5544444433211 122233 45
Q ss_pred cccHHHHHhcCCCCCc-ChHHHHHHHHH
Q 042656 254 VSSMNKSREFGFFGFV-DTMKSIRTWVK 280 (289)
Q Consensus 254 ~~d~~Kar~~Gw~~~~-dt~e~~~~~~~ 280 (289)
.+=..|+.+.||+=.+ |+.+++.+.++
T Consensus 268 rvlP~kl~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 268 RVLPKKLEAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred hhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence 5666888888996555 77788877654
No 61
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.57 E-value=4.2e-07 Score=92.38 Aligned_cols=165 Identities=10% Similarity=0.160 Sum_probs=105.9
Q ss_pred cCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccC--CCCCCCC--CC------------------C-----
Q 042656 13 SDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLI--GHDPPFK--ED------------------S----- 64 (289)
Q Consensus 13 ~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~--~~~~P~~--E~------------------~----- 64 (289)
.++.....+|+.++.+.++...-..+.|++..+| ...+|... -.+.++. +. +
T Consensus 234 ~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~ 313 (605)
T PLN02503 234 ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEI 313 (605)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHH
Confidence 4577788999999999998733333567776655 44555421 0112221 00 0
Q ss_pred ---------C------------------C-CCCCCChHHHHHHHHh-----cCCCceEEEeccCce----------eecC
Q 042656 65 ---------V------------------R-LPFPNFYYAVEDIAAS-----YSPAVTYSVHRSSII----------IGAS 101 (289)
Q Consensus 65 ---------p------------------r-~p~p~fyy~qEd~L~e-----~~~g~~~~ivRP~~V----------~G~~ 101 (289)
| . ...||. |...|.|+| ...++..+|+||+.| +|.+
T Consensus 314 ~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNt-Yt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~ 392 (605)
T PLN02503 314 KLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDT-YVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEG 392 (605)
T ss_pred HHHHHhhhcccchHHHHHHhhhcccchhhhCCCCCh-HHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccC
Confidence 0 0 113343 555555555 456899999999999 3333
Q ss_pred CCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhc-CCC---cCCCeeEecC
Q 042656 102 SRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAAT-TDR---AKNQAFNCTN 177 (289)
Q Consensus 102 ~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~-~p~---a~ge~FNi~d 177 (289)
. +...++.+.. ..|.--.+ +|++. +..|.+.+|++|++++.|+. ++. ..+++||+++
T Consensus 393 ~----~~~~p~~~~~----g~G~lr~~--------~~~~~---~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts 453 (605)
T PLN02503 393 N----RMMDPIVLYY----GKGQLTGF--------LADPN---GVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIAS 453 (605)
T ss_pred c----cccchhhhhe----eccceeEE--------EeCCC---eeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCC
Confidence 2 1122222111 14544346 78876 99999999999999999842 232 2479999998
Q ss_pred C--CccCHHHHHHHHHHHhCCC
Q 042656 178 G--DVFTWKSLWKLLSEIFDVE 197 (289)
Q Consensus 178 g--~~~s~~~lw~~la~~~G~~ 197 (289)
+ .+++|.++...+++++...
T Consensus 454 ~~~nP~t~~~~~~~~~~~~~~~ 475 (605)
T PLN02503 454 SVVNPLVFQDLARLLYEHYKSS 475 (605)
T ss_pred CCCCCeEHHHHHHHHHHHHhhC
Confidence 8 8999999999999988753
No 62
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.34 E-value=7.8e-06 Score=74.71 Aligned_cols=145 Identities=14% Similarity=0.136 Sum_probs=93.4
Q ss_pred HHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHhcCCCceEEEeccCceeecCCCc
Q 042656 25 SLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGASSRS 104 (289)
Q Consensus 25 ~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e~~~g~~~~ivRP~~V~G~~~gn 104 (289)
.+.+.++. +..+|+|+++..|. .+. .. .. + .....|+.+.+ ..+++|+++||+.+++.-...
T Consensus 84 ~~~~~i~a-a~~~gv~~~V~~Ss--~~~----~~----~~-----~-~~~~~~~~l~~-~~gi~~tilRp~~f~~~~~~~ 145 (285)
T TIGR03649 84 PMIKFIDF-ARSKGVRRFVLLSA--SII----EK----GG-----P-AMGQVHAHLDS-LGGVEYTVLRPTWFMENFSEE 145 (285)
T ss_pred HHHHHHHH-HHHcCCCEEEEeec--ccc----CC----CC-----c-hHHHHHHHHHh-ccCCCEEEEeccHHhhhhccc
Confidence 34444555 67899999987442 111 00 00 0 11233555543 248999999999887432111
Q ss_pred hhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcCCCeeEecCCCccCHH
Q 042656 105 LNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWK 184 (289)
Q Consensus 105 ~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~ 184 (289)
++ ...+ ..+.++..+ .|+ ...++++++++|+++..++.++...++.||++.++.+|++
T Consensus 146 ~~--~~~~--------~~~~~~~~~-------~g~-----~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~ 203 (285)
T TIGR03649 146 FH--VEAI--------RKENKIYSA-------TGD-----GKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYD 203 (285)
T ss_pred cc--cccc--------ccCCeEEec-------CCC-----CccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHH
Confidence 00 0001 122233330 233 5678999999999999999988777899999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 042656 185 SLWKLLSEIFDVEFVPFDEKEKFDVVEMM 213 (289)
Q Consensus 185 ~lw~~la~~~G~~~~~~~~~~p~~l~~~~ 213 (289)
|+...|++.+|.+... .+++..++.
T Consensus 204 eia~~l~~~~g~~v~~----~~~~~~~~~ 228 (285)
T TIGR03649 204 DVAEILSRVLGRKITH----VKLTEEELA 228 (285)
T ss_pred HHHHHHHHHhCCceEE----EeCCHHHHH
Confidence 9999999999997654 555565443
No 63
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=98.23 E-value=2.8e-05 Score=70.63 Aligned_cols=229 Identities=14% Similarity=0.163 Sum_probs=140.9
Q ss_pred ccccCcccccCCchhhccChHHHHHhhhhH---hhhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 042656 4 CEIHYTGPISDPSLTVGASSRSLHNSLLPL---AVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIA 80 (289)
Q Consensus 4 ~~~~v~~~~~~p~~~~~~~~~~~~~~l~~~---~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L 80 (289)
|..||--|+.-|.-+..+...|+...|..| .+..++|.|.....+.||. -.+.|.+|..|-.| .+.|+..+.-
T Consensus 115 AQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGk--v~e~PQsE~TPFyP--RSPYa~aKmy 190 (376)
T KOG1372|consen 115 AQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGK--VQEIPQSETTPFYP--RSPYAAAKMY 190 (376)
T ss_pred hhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhccc--ccCCCcccCCCCCC--CChhHHhhhh
Confidence 567899999999999999999999888764 3577888898734888997 45799999999875 3338877754
Q ss_pred HhcCCCceEEEeccC----------ceeec-CC--C-chhhhHHHHHHHHHHHHH-hCCC-eEEEeccccCCCCCccccc
Q 042656 81 ASYSPAVTYSVHRSS----------IIIGA-SS--R-SLNNSLLTLAVYATICRH-QGLP-FRYLAIHGSSLSGNKYTWE 144 (289)
Q Consensus 81 ~e~~~g~~~~ivRP~----------~V~G~-~~--g-n~~nl~~~l~vyaal~~~-~g~p-l~f~~~~~~~~pG~~~~~~ 144 (289)
.- |.++-.. +.|-. +| | ||... -|--++.|- +|+. -.+ -||..
T Consensus 191 ~~------WivvNyREAYnmfAcNGILFNHESPRRGenFVTR----KItRsvakI~~gqqe~~~--------LGNL~--- 249 (376)
T KOG1372|consen 191 GY------WIVVNYREAYNMFACNGILFNHESPRRGENFVTR----KITRSVAKISLGQQEKIE--------LGNLS--- 249 (376)
T ss_pred he------EEEEEhHHhhcceeeccEeecCCCCccccchhhH----HHHHHHHHhhhcceeeEE--------ecchh---
Confidence 32 3333222 22222 33 2 44322 233344332 4543 333 46654
Q ss_pred ccccccchHHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHHhHHHHHHHH
Q 042656 145 HFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVPFDEKEKFDVVEMMEEKGEIWDEIV 224 (289)
Q Consensus 145 ~~~~~~~~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~~~~~~p~~l~~~~~~~~~~W~~i~ 224 (289)
+.+|+-.+..-++++ |.+..- ..-+-|-|+.|+.+|.+|+...--...|....--. .-.. +...
T Consensus 250 a~RDWGhA~dYVEAM-W~mLQ~-d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg--~gv~--~~~~---------- 313 (376)
T KOG1372|consen 250 ALRDWGHAGDYVEAM-WLMLQQ-DSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEG--EGVD--EVGK---------- 313 (376)
T ss_pred hhcccchhHHHHHHH-HHHHhc-CCCCceEEecCCcccHHHHHHHHHHhhCcEEeecc--cccc--cccc----------
Confidence 899999999999995 555432 24468999999999999999988777774332100 0000 0000
Q ss_pred HHhCCCcccccc-ccchhhhhhhhcccccccccHHHHHhc-CCCCCcChHHHHHHHHH
Q 042656 225 EKHGLYKTKMEE-ITCFEALNTVLHLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVK 280 (289)
Q Consensus 225 ~k~gl~~~~l~~-l~~w~f~d~~~~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~ 280 (289)
.+-|..--.++. ...-.=.| .++.|.+||++. ||+|.+...|-..++++
T Consensus 314 n~~g~v~V~v~~kYyRPtEVd-------~LqGdasKAk~~LgW~pkv~f~eLVkeMv~ 364 (376)
T KOG1372|consen 314 NDDGVVRVKVDPKYYRPTEVD-------TLQGDASKAKKTLGWKPKVTFPELVKEMVA 364 (376)
T ss_pred cCCceEEEEecccccCcchhh-------hhcCChHHHHHhhCCCCccCHHHHHHHHHH
Confidence 000100000000 00000001 368899999995 99999998776666553
No 64
>PRK12320 hypothetical protein; Provisional
Probab=98.18 E-value=3.1e-05 Score=79.97 Aligned_cols=125 Identities=18% Similarity=0.209 Sum_probs=82.2
Q ss_pred ccChHHHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHhcCCCceEEEeccCceee
Q 042656 20 GASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIG 99 (289)
Q Consensus 20 ~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e~~~g~~~~ivRP~~V~G 99 (289)
.+|+.++.+.++. +...|+| ...+|. .+|. |..|...|.++.+ .+++++|+|+++|||
T Consensus 77 ~vNv~Gt~nLleA-A~~~GvR-iV~~SS-~~G~-----------------~~~~~~aE~ll~~--~~~p~~ILR~~nVYG 134 (699)
T PRK12320 77 GVGITGLAHVANA-AARAGAR-LLFVSQ-AAGR-----------------PELYRQAETLVST--GWAPSLVIRIAPPVG 134 (699)
T ss_pred hHHHHHHHHHHHH-HHHcCCe-EEEEEC-CCCC-----------------CccccHHHHHHHh--cCCCEEEEeCceecC
Confidence 4788899999888 6677874 444231 1221 1123356776654 358899999999999
Q ss_pred cCCC-chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcCCCeeEecCC
Q 042656 100 ASSR-SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNG 178 (289)
Q Consensus 100 ~~~g-n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~ge~FNi~dg 178 (289)
+... +..+.+.. .+... ..+.|+.+ +++++++++++.++..+. +.+|||++|
T Consensus 135 p~~~~~~~r~I~~-~l~~~---~~~~pI~v---------------------IyVdDvv~alv~al~~~~--~GiyNIG~~ 187 (699)
T PRK12320 135 RQLDWMVCRTVAT-LLRSK---VSARPIRV---------------------LHLDDLVRFLVLALNTDR--NGVVDLATP 187 (699)
T ss_pred CCCcccHhHHHHH-HHHHH---HcCCceEE---------------------EEHHHHHHHHHHHHhCCC--CCEEEEeCC
Confidence 9542 22232221 11111 13444433 688889999999887642 349999999
Q ss_pred CccCHHHHHHHHHHH
Q 042656 179 DVFTWKSLWKLLSEI 193 (289)
Q Consensus 179 ~~~s~~~lw~~la~~ 193 (289)
+.+|..++...++..
T Consensus 188 ~~~Si~el~~~i~~~ 202 (699)
T PRK12320 188 DTTNVVTAWRLLRSV 202 (699)
T ss_pred CeeEHHHHHHHHHHh
Confidence 999999998888666
No 65
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.68 E-value=0.00037 Score=62.63 Aligned_cols=144 Identities=10% Similarity=0.076 Sum_probs=85.5
Q ss_pred CCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh---cCCCceE
Q 042656 14 DPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS---YSPAVTY 89 (289)
Q Consensus 14 ~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e---~~~g~~~ 89 (289)
+|......|..++.+.++. +...|.+++..++ ...+|. ....|..+..... .+...|...+...| +..++.|
T Consensus 100 ~~~~~~~~n~~~~~~ll~a-~~~~~~~~iV~iSS~~v~g~--~~~~~~~~~~~~~-~~~~~~~~~k~~~e~~l~~~gi~~ 175 (251)
T PLN00141 100 DPFAPWKVDNFGTVNLVEA-CRKAGVTRFILVSSILVNGA--AMGQILNPAYIFL-NLFGLTLVAKLQAEKYIRKSGINY 175 (251)
T ss_pred CCCCceeeehHHHHHHHHH-HHHcCCCEEEEEccccccCC--CcccccCcchhHH-HHHHHHHHHHHHHHHHHHhcCCcE
Confidence 3444567788888888888 4577888888756 334443 1112221111000 01011222222222 3468999
Q ss_pred EEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcC
Q 042656 90 SVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAK 169 (289)
Q Consensus 90 ~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~ 169 (289)
+++||+.+++.... |..... ++... ....++.+++|+++..++..|...
T Consensus 176 ~iirpg~~~~~~~~-------------------~~~~~~--------~~~~~----~~~~i~~~dvA~~~~~~~~~~~~~ 224 (251)
T PLN00141 176 TIVRPGGLTNDPPT-------------------GNIVME--------PEDTL----YEGSISRDQVAEVAVEALLCPESS 224 (251)
T ss_pred EEEECCCccCCCCC-------------------ceEEEC--------CCCcc----ccCcccHHHHHHHHHHHhcChhhc
Confidence 99999999976421 111111 22211 123467888999999999988877
Q ss_pred CCeeEecCC---CccCHHHHHHHHHH
Q 042656 170 NQAFNCTNG---DVFTWKSLWKLLSE 192 (289)
Q Consensus 170 ge~FNi~dg---~~~s~~~lw~~la~ 192 (289)
+.++.|..+ -..+++++...|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 225 YKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred CcEEEEecCCCCCchhHHHHHHHhhc
Confidence 888888853 35788888888764
No 66
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=97.56 E-value=4.5e-05 Score=68.85 Aligned_cols=128 Identities=15% Similarity=0.078 Sum_probs=59.4
Q ss_pred hhhccChHHHHHhhhhHhhhccCceeecccccccCccCCCC---CC--CCCCCCCCC-CCCChHHHHHHHHh-------c
Q 042656 17 LTVGASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHD---PP--FKEDSVRLP-FPNFYYAVEDIAAS-------Y 83 (289)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~---~P--~~E~~pr~p-~p~fyy~qEd~L~e-------~ 83 (289)
....+|+.|+.+.++. +.+...|++..+|....+...... .+ ..|++...+ ....-|.|.|+++| +
T Consensus 106 ~~~~~NV~gt~~ll~l-a~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~ 184 (249)
T PF07993_consen 106 ELRAVNVDGTRNLLRL-AAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQ 184 (249)
T ss_dssp EEHHHHHHHHHHHHHH-HTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHH-HHhccCcceEEeccccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHh
Confidence 3568899999999998 666666777666632222110100 11 111111111 11225777666666 2
Q ss_pred CCCceEEEeccCceeecCC-Cch--hhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHH
Q 042656 84 SPAVTYSVHRSSIIIGASS-RSL--NNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQ 159 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~-gn~--~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~ 159 (289)
..+++++|+||+.|+|... |-. ..... ..+. .|...|.-..+ +++.. ...|++.+|.+|++|
T Consensus 185 ~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~-~~~~--~~~~~~~~p~~--------~~~~~---~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 185 RHGLPVTIYRPGIIVGDSRTGWWNSDDFFP-YLLR--SCIALGAFPDL--------PGDPD---ARLDLVPVDYVARAI 249 (249)
T ss_dssp HH---EEEEEE-EEE-SSSSS---TTBHHH-HHHH--HHHHH-EEES---------SB------TT--EEEHHHHHHHH
T ss_pred cCCceEEEEecCcccccCCCceeeccchHH-HHHH--HHHHcCCcccc--------cCCCC---ceEeEECHHHHHhhC
Confidence 2499999999999999543 321 11111 1111 12235554445 66554 559999999999985
No 67
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.48 E-value=0.002 Score=64.65 Aligned_cols=153 Identities=13% Similarity=0.070 Sum_probs=113.0
Q ss_pred ccccCcccccCCchhhccChHHHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-
Q 042656 4 CEIHYTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS- 82 (289)
Q Consensus 4 ~~~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e- 82 (289)
|.-|||-.=..|.+.+.+|+.||.|.++. +...|+|+++.+|. |-..+ |..-|.+.|.++|
T Consensus 334 A~KHVPl~E~nP~Eai~tNV~GT~nv~~a-a~~~~V~~~V~iST---------------DKAV~--PtNvmGaTKr~aE~ 395 (588)
T COG1086 334 ALKHVPLVEYNPEEAIKTNVLGTENVAEA-AIKNGVKKFVLIST---------------DKAVN--PTNVMGATKRLAEK 395 (588)
T ss_pred hhccCcchhcCHHHHHHHhhHhHHHHHHH-HHHhCCCEEEEEec---------------CcccC--CchHhhHHHHHHHH
Confidence 45578888899999999999999999999 99999999998541 11122 3344777777777
Q ss_pred ------c-CC--CceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchH
Q 042656 83 ------Y-SP--AVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSR 153 (289)
Q Consensus 83 ------~-~~--g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~ 153 (289)
. .. +..++++|.++|.|.. ||...+-.-. -+.|.|++. - +++ -+|=+-...
T Consensus 396 ~~~a~~~~~~~~~T~f~~VRFGNVlGSr-GSViPlFk~Q-------I~~GgplTv--------T-dp~---mtRyfMTI~ 455 (588)
T COG1086 396 LFQAANRNVSGTGTRFCVVRFGNVLGSR-GSVIPLFKKQ-------IAEGGPLTV--------T-DPD---MTRFFMTIP 455 (588)
T ss_pred HHHHHhhccCCCCcEEEEEEecceecCC-CCCHHHHHHH-------HHcCCCccc--------c-CCC---ceeEEEEHH
Confidence 1 22 5899999999999985 4433332111 146999998 1 222 444455566
Q ss_pred HHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhC
Q 042656 154 VLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFD 195 (289)
Q Consensus 154 ~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G 195 (289)
.-+++.+.|... ...||+|-.--|++++..+|.+.+-+.+|
T Consensus 456 EAv~LVlqA~a~-~~gGeifvldMGepvkI~dLAk~mi~l~g 496 (588)
T COG1086 456 EAVQLVLQAGAI-AKGGEIFVLDMGEPVKIIDLAKAMIELAG 496 (588)
T ss_pred HHHHHHHHHHhh-cCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence 677777777655 24689999999999999999999999999
No 68
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=97.47 E-value=0.0017 Score=58.62 Aligned_cols=137 Identities=14% Similarity=0.116 Sum_probs=94.0
Q ss_pred hhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHH-h-----cCCCceEEEeccCceeecCCCc
Q 042656 31 LPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAA-S-----YSPAVTYSVHRSSIIIGASSRS 104 (289)
Q Consensus 31 ~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~-e-----~~~g~~~~ivRP~~V~G~~~gn 104 (289)
+.+++.+|+-+|.- | ...-++|+++-. .|-|-+--.|. | .......+++|-+.|.|-+-|.
T Consensus 123 ~~~Vlv~gva~y~p-S---------~s~eY~e~~~~q---gfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa 189 (315)
T KOG3019|consen 123 RPTVLVSGVAVYVP-S---------ESQEYSEKIVHQ---GFDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGA 189 (315)
T ss_pred CCeEEEEeeEEecc-c---------cccccccccccC---ChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcc
Confidence 45667777777765 1 123467887654 34343332222 2 3456899999999999998654
Q ss_pred hhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcCCCeeEecCCCccCHH
Q 042656 105 LNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWK 184 (289)
Q Consensus 105 ~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~ 184 (289)
...+.. |+.||+ .|.-.+.++...++.+++|+..+-+|.+.|..+| +.|-.-..+.+-.
T Consensus 190 ~~~M~l--------------pF~~g~------GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~G-ViNgvAP~~~~n~ 248 (315)
T KOG3019|consen 190 LAMMIL--------------PFQMGA------GGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKG-VINGVAPNPVRNG 248 (315)
T ss_pred hhhhhh--------------hhhhcc------CCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCc-eecccCCCccchH
Confidence 322222 333321 3333344589999999999999999999987776 5666666789999
Q ss_pred HHHHHHHHHhCCCCCCC
Q 042656 185 SLWKLLSEIFDVEFVPF 201 (289)
Q Consensus 185 ~lw~~la~~~G~~~~~~ 201 (289)
|+-+.|++.++.+.-.|
T Consensus 249 Ef~q~lg~aL~Rp~~~p 265 (315)
T KOG3019|consen 249 EFCQQLGSALSRPSWLP 265 (315)
T ss_pred HHHHHHHHHhCCCcccC
Confidence 99999999999998765
No 69
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=97.31 E-value=0.00052 Score=64.03 Aligned_cols=153 Identities=14% Similarity=0.060 Sum_probs=102.3
Q ss_pred ccCcccccCCchhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh--
Q 042656 6 IHYTGPISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS-- 82 (289)
Q Consensus 6 ~~v~~~~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e-- 82 (289)
-||+-.=..|...+.+|+.|+.|.++. +...|++++..+| .+ ... |..-|.+.|.++|
T Consensus 88 KhVpl~E~~p~eav~tNv~GT~nv~~a-a~~~~v~~~v~ISTDK----------------Av~--PtnvmGatKrlaE~l 148 (293)
T PF02719_consen 88 KHVPLMEDNPFEAVKTNVLGTQNVAEA-AIEHGVERFVFISTDK----------------AVN--PTNVMGATKRLAEKL 148 (293)
T ss_dssp --HHHHCCCHHHHHHHHCHHHHHHHHH-HHHTT-SEEEEEEECG----------------CSS----SHHHHHHHHHHHH
T ss_pred CCCChHHhCHHHHHHHHHHHHHHHHHH-HHHcCCCEEEEccccc----------------cCC--CCcHHHHHHHHHHHH
Confidence 345555568999999999999999988 8899999999855 21 112 5566888777777
Q ss_pred -----cC---CCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHH
Q 042656 83 -----YS---PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRV 154 (289)
Q Consensus 83 -----~~---~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~ 154 (289)
.. .+..++++|.++|.|.. ||... ++.... +.|.|+.. .. +. -.|=+.+.+.
T Consensus 149 ~~~~~~~~~~~~t~f~~VRFGNVlgS~-GSVip----~F~~Qi---~~g~PlTv--------T~-p~---mtRffmti~E 208 (293)
T PF02719_consen 149 VQAANQYSGNSDTKFSSVRFGNVLGSR-GSVIP----LFKKQI---KNGGPLTV--------TD-PD---MTRFFMTIEE 208 (293)
T ss_dssp HHHHCCTSSSS--EEEEEEE-EETTGT-TSCHH----HHHHHH---HTTSSEEE--------CE-TT----EEEEE-HHH
T ss_pred HHHHhhhCCCCCcEEEEEEecceecCC-CcHHH----HHHHHH---HcCCccee--------CC-CC---cEEEEecHHH
Confidence 11 35899999999999975 33322 211111 47999988 32 21 5566677777
Q ss_pred HHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCC
Q 042656 155 LAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEF 198 (289)
Q Consensus 155 la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~ 198 (289)
-++.++.|+... ..||+|..--|++++..+|...+.+.+|...
T Consensus 209 Av~Lvl~a~~~~-~~geifvl~mg~~v~I~dlA~~~i~~~g~~~ 251 (293)
T PF02719_consen 209 AVQLVLQAAALA-KGGEIFVLDMGEPVKILDLAEAMIELSGLEP 251 (293)
T ss_dssp HHHHHHHHHHH---TTEEEEE---TCEECCCHHHHHHHHTT-EE
T ss_pred HHHHHHHHHhhC-CCCcEEEecCCCCcCHHHHHHHHHhhccccc
Confidence 888888877543 3689999999999999999999999999754
No 70
>PRK09135 pteridine reductase; Provisional
Probab=97.00 E-value=0.0044 Score=54.59 Aligned_cols=129 Identities=12% Similarity=0.039 Sum_probs=73.3
Q ss_pred cCCchhhccChHHHHHhhhhHhh---hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHH-----HHHHHh--
Q 042656 13 SDPSLTVGASSRSLHNSLLPLAV---HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAV-----EDIAAS-- 82 (289)
Q Consensus 13 ~~p~~~~~~~~~~~~~~l~~~~l---~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~q-----Ed~L~e-- 82 (289)
+++...+.+|+.++.+.++.+.- .++...+.. ....++.|.. |..-|.. |.++..
T Consensus 107 ~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~--~~~~Y~~sK~~~~~~~~~l~ 171 (249)
T PRK09135 107 AQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNI-------------TDIHAERPLK--GYPVYCAAKAALEMLTRSLA 171 (249)
T ss_pred HHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEE-------------eChhhcCCCC--CchhHHHHHHHHHHHHHHHH
Confidence 44566888999999999988541 222222221 1122333322 2223554 444443
Q ss_pred --cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHH
Q 042656 83 --YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQI 160 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i 160 (289)
...++.++++||+.|+|+...+.++..... . . ..+.++.- .| +++++|+++.
T Consensus 172 ~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~---~-~--~~~~~~~~--------~~------------~~~d~a~~~~ 225 (249)
T PRK09135 172 LELAPEVRVNAVAPGAILWPEDGNSFDEEARQ---A-I--LARTPLKR--------IG------------TPEDIAEAVR 225 (249)
T ss_pred HHHCCCCeEEEEEeccccCccccccCCHHHHH---H-H--HhcCCcCC--------Cc------------CHHHHHHHHH
Confidence 224699999999999999753222211100 0 0 12333221 11 2578999997
Q ss_pred HHhcCC-CcCCCeeEecCCCccC
Q 042656 161 WAATTD-RAKNQAFNCTNGDVFT 182 (289)
Q Consensus 161 ~aa~~p-~a~ge~FNi~dg~~~s 182 (289)
+++... ...|++|||.+|...+
T Consensus 226 ~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 226 FLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred HHcCccccccCcEEEECCCeecc
Confidence 777543 3468999999998654
No 71
>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A ....
Probab=96.94 E-value=0.00093 Score=48.09 Aligned_cols=38 Identities=18% Similarity=0.052 Sum_probs=25.5
Q ss_pred cccccccccHHHHHhc-CCCCCcChHHHHHHHHHHHHHC
Q 042656 248 HLQFQHVSSMNKSREF-GFFGFVDTMKSIRTWVKKLREM 285 (289)
Q Consensus 248 ~~~~~~~~d~~Kar~~-Gw~~~~dt~e~~~~~~~~lr~~ 285 (289)
|+...+..|++||++. ||+|.+|+.+++.++++|.++.
T Consensus 20 GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n 58 (62)
T PF13950_consen 20 GDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN 58 (62)
T ss_dssp T--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred CchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence 3445789999999995 9999999999999999998864
No 72
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.88 E-value=0.0031 Score=60.55 Aligned_cols=168 Identities=16% Similarity=0.007 Sum_probs=86.5
Q ss_pred chhhccChHHHHHhhhhHhhhccCceeeccc-ccccCccC--CCCCCCCCCCCCCC------CC--CChHHHHHHHHh-c
Q 042656 16 SLTVGASSRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLI--GHDPPFKEDSVRLP------FP--NFYYAVEDIAAS-Y 83 (289)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~--~~~~P~~E~~pr~p------~p--~fyy~qEd~L~e-~ 83 (289)
+.-.+.|+.|+...|+- +.+.-.|.+-.+| .+++...- ....-++|++|..- .+ +++|..|.++++ .
T Consensus 105 s~L~~~NVlGT~evlrL-a~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~ 183 (382)
T COG3320 105 SELRGANVLGTAEVLRL-AATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG 183 (382)
T ss_pred HHhcCcchHhHHHHHHH-HhcCCCceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh
Confidence 45668999999999987 7676688665545 33332210 11122233344331 11 344666666666 3
Q ss_pred CCCceEEEeccCceeecCC-CchhhhHHHHHHHHHHHHHhCC-CeEEEeccccCCCCCccc--ccccccccchHHHHHHH
Q 042656 84 SPAVTYSVHRSSIIIGASS-RSLNNSLLTLAVYATICRHQGL-PFRYLAIHGSSLSGNKYT--WEHFCDMSDSRVLAEQQ 159 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~-gn~~nl~~~l~vyaal~~~~g~-pl~f~~~~~~~~pG~~~~--~~~~~~~~~~~~la~~~ 159 (289)
..|+..+|+||+.|.|.+. |.+ |.-.-+.-....|-+.|. |..+= .=+.-. -....+...+..+++++
T Consensus 184 ~rGLpv~I~Rpg~I~gds~tG~~-n~~D~~~Rlv~~~~~lg~~P~~~~-------~~~~~p~~~v~~~v~~~~~~~~~~~ 255 (382)
T COG3320 184 DRGLPVTIFRPGYITGDSRTGAL-NTRDFLTRLVLGLLQLGIAPDSEY-------SLDMLPVDHVARAVVAPSVQVAEAI 255 (382)
T ss_pred hcCCCeEEEecCeeeccCccCcc-ccchHHHHHHHHHHHhCCCCCccc-------chhhCccceeeEEeehhhhhHHHHH
Confidence 3599999999999999976 322 221111122223334442 22220 000000 01222233344455433
Q ss_pred HHHhcCCCc-CCCeeEecCCCccCHHHHHHHHHH
Q 042656 160 IWAATTDRA-KNQAFNCTNGDVFTWKSLWKLLSE 192 (289)
Q Consensus 160 i~aa~~p~a-~ge~FNi~dg~~~s~~~lw~~la~ 192 (289)
.....||.. -++.+-..-|+.+...++...+.+
T Consensus 256 ~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 256 AALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred HHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 333334443 244442334788888888888777
No 73
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=96.80 E-value=0.0054 Score=57.11 Aligned_cols=144 Identities=15% Similarity=0.154 Sum_probs=97.8
Q ss_pred cChHHHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHhcCCCceEEEeccCceeec
Q 042656 21 ASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAASYSPAVTYSVHRSSIIIGA 100 (289)
Q Consensus 21 ~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e~~~g~~~~ivRP~~V~G~ 100 (289)
+|+.+ ...|.+++-..|+-+|..+| ++|. . ++-.+--. ...+..|..++++- -+-+|+||..|||.
T Consensus 152 vn~~~-aerlAricke~GVerfIhvS--~Lga----n--v~s~Sr~L---rsK~~gE~aVrdaf--PeAtIirPa~iyG~ 217 (391)
T KOG2865|consen 152 VNVHI-AERLARICKEAGVERFIHVS--CLGA----N--VKSPSRML---RSKAAGEEAVRDAF--PEATIIRPADIYGT 217 (391)
T ss_pred ccchH-HHHHHHHHHhhChhheeehh--hccc----c--ccChHHHH---HhhhhhHHHHHhhC--Ccceeechhhhccc
Confidence 44444 34566778889999998754 3332 1 11111000 23466676666622 35589999999999
Q ss_pred CCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcCCCeeEecCCCc
Q 042656 101 SSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDV 180 (289)
Q Consensus 101 ~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~ge~FNi~dg~~ 180 (289)
-++ |+| -|+++.|+.| ++|. .|-+ |+.+..-+++-++|.+|+-|+.+|.+.|.+|-....+.
T Consensus 218 eDr-fln------~ya~~~rk~~-~~pL--------~~~G--ekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~ 279 (391)
T KOG2865|consen 218 EDR-FLN------YYASFWRKFG-FLPL--------IGKG--EKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDR 279 (391)
T ss_pred chh-HHH------HHHHHHHhcC-ceee--------ecCC--cceeeccEEEehHHHHHHHhccCccccCceeeecCCch
Confidence 873 222 3677777744 5666 2222 45667778888899999999999999999999999999
Q ss_pred cCHHHHHHHHHHHhCC
Q 042656 181 FTWKSLWKLLSEIFDV 196 (289)
Q Consensus 181 ~s~~~lw~~la~~~G~ 196 (289)
+...||...+=+..-.
T Consensus 280 yql~eLvd~my~~~~~ 295 (391)
T KOG2865|consen 280 YQLSELVDIMYDMARE 295 (391)
T ss_pred hhHHHHHHHHHHHHhh
Confidence 9999998877555443
No 74
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.48 E-value=0.0024 Score=56.53 Aligned_cols=142 Identities=13% Similarity=0.217 Sum_probs=81.3
Q ss_pred HHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCC-CCC--ChHHHHHHHHhcCCCceEEEeccCceeecCC
Q 042656 26 LHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLP-FPN--FYYAVEDIAASYSPAVTYSVHRSSIIIGASS 102 (289)
Q Consensus 26 ~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p-~p~--fyy~qEd~L~e~~~g~~~~ivRP~~V~G~~~ 102 (289)
...++-.-+..+|+|+|.. + .+|. ..++.....| .|. ..+..|+.|++ .+++|+++||+.-+....
T Consensus 82 ~~~~li~Aa~~agVk~~v~-s--s~~~------~~~~~~~~~p~~~~~~~k~~ie~~l~~--~~i~~t~i~~g~f~e~~~ 150 (233)
T PF05368_consen 82 QQKNLIDAAKAAGVKHFVP-S--SFGA------DYDESSGSEPEIPHFDQKAEIEEYLRE--SGIPYTIIRPGFFMENLL 150 (233)
T ss_dssp HHHHHHHHHHHHT-SEEEE-S--EESS------GTTTTTTSTTHHHHHHHHHHHHHHHHH--CTSEBEEEEE-EEHHHHH
T ss_pred hhhhHHHhhhccccceEEE-E--Eecc------cccccccccccchhhhhhhhhhhhhhh--ccccceeccccchhhhhh
Confidence 3344444478899999986 3 1221 1223333222 111 12344666665 499999999886443311
Q ss_pred CchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccc-cchHHHHHHHHHHhcCCCcC--CCeeEecCCC
Q 042656 103 RSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDM-SDSRVLAEQQIWAATTDRAK--NQAFNCTNGD 179 (289)
Q Consensus 103 gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~-~~~~~la~~~i~aa~~p~a~--ge~FNi~dg~ 179 (289)
...... -.+ +....-+.+ +++.. ..... ++.++++++...++.+|... |+.++++. +
T Consensus 151 ----~~~~~~---~~~-~~~~~~~~~--------~~~~~---~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~ 210 (233)
T PF05368_consen 151 ----PPFAPV---VDI-KKSKDVVTL--------PGPGN---QKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-E 210 (233)
T ss_dssp ----TTTHHT---TCS-CCTSSEEEE--------ETTST---SEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-G
T ss_pred ----hhhccc---ccc-cccceEEEE--------ccCCC---ccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-C
Confidence 111000 000 000112444 33332 22333 58888999999999998754 68888865 8
Q ss_pred ccCHHHHHHHHHHHhCCCC
Q 042656 180 VFTWKSLWKLLSEIFDVEF 198 (289)
Q Consensus 180 ~~s~~~lw~~la~~~G~~~ 198 (289)
..|++|+...+.+.+|.+.
T Consensus 211 ~~t~~eia~~~s~~~G~~v 229 (233)
T PF05368_consen 211 TLTYNEIAAILSKVLGKKV 229 (233)
T ss_dssp EEEHHHHHHHHHHHHTSEE
T ss_pred CCCHHHHHHHHHHHHCCcc
Confidence 8999999999999999864
No 75
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=96.30 E-value=0.0081 Score=59.40 Aligned_cols=171 Identities=15% Similarity=0.152 Sum_probs=102.3
Q ss_pred ccCCchhhccChHHHHHhhhhHhhhccCceeecccc--cccCccCCCCCCC--CCCCCCC--------------------
Q 042656 12 ISDPSLTVGASSRSLHNSLLPLAVHTNICKYQGLPF--RYFGQLIGHDPPF--KEDSVRL-------------------- 67 (289)
Q Consensus 12 ~~~p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~--~~~g~~~~~~~P~--~E~~pr~-------------------- 67 (289)
.+.=......|++|+.+.++...-....+.+..+|. ..-....-.+.|+ .|..+..
T Consensus 120 de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~ 199 (467)
T KOG1221|consen 120 DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPK 199 (467)
T ss_pred chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHH
Confidence 344456678899999999988555666666665552 1110000012222 2221111
Q ss_pred ---CCCCCh-HH---HHHHHHhcCCCceEEEeccCceeecC----CCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCC
Q 042656 68 ---PFPNFY-YA---VEDIAASYSPAVTYSVHRSSIIIGAS----SRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSL 136 (289)
Q Consensus 68 ---p~p~fy-y~---qEd~L~e~~~g~~~~ivRP~~V~G~~----~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~ 136 (289)
..||-| |. .|+.+.++..++..+|+||+.|...- +|=.-|+-.+.++-.+. -.|.-..|
T Consensus 200 l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~--gkGvlr~~-------- 269 (467)
T KOG1221|consen 200 LLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGY--GKGVLRCF-------- 269 (467)
T ss_pred hcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEe--ccceEEEE--------
Confidence 124443 11 36666667789999999999998762 22111110111111111 24555556
Q ss_pred CCCcccccccccccchHHHHHHHHHHhc-CCCcC----CCeeEecCCC--ccCHHHHHHHHHHHhC
Q 042656 137 SGNKYTWEHFCDMSDSRVLAEQQIWAAT-TDRAK----NQAFNCTNGD--VFTWKSLWKLLSEIFD 195 (289)
Q Consensus 137 pG~~~~~~~~~~~~~~~~la~~~i~aa~-~p~a~----ge~FNi~dg~--~~s~~~lw~~la~~~G 195 (289)
.+|+. +..|.+-+|.+|.+++.|+- +.... -.+||++.++ +++|+++.....+++-
T Consensus 270 ~~d~~---~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 270 LVDPK---AVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE 332 (467)
T ss_pred EEccc---cccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence 66765 89999999999999997662 22122 3599999765 9999999999988876
No 76
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.30 E-value=0.0067 Score=51.31 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=57.1
Q ss_pred hHHHHHhhhhHhhhccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHH----HHHHHhcCCCceEEEeccCce
Q 042656 23 SRSLHNSLLPLAVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAV----EDIAASYSPAVTYSVHRSSII 97 (289)
Q Consensus 23 ~~~~~~~l~~~~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~q----Ed~L~e~~~g~~~~ivRP~~V 97 (289)
...+.+.++. +..+|+|++..++ ...+++ .+....+...+.+..|+.. |+.+ +..+++|+++||+.+
T Consensus 75 ~~~~~~~~~a-~~~~~~~~~v~~s~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~e~~~--~~~~~~~~ivrp~~~ 146 (183)
T PF13460_consen 75 VDAAKNIIEA-AKKAGVKRVVYLSSAGVYRD-----PPGLFSDEDKPIFPEYARDKREAEEAL--RESGLNWTIVRPGWI 146 (183)
T ss_dssp HHHHHHHHHH-HHHTTSSEEEEEEETTGTTT-----CTSEEEGGTCGGGHHHHHHHHHHHHHH--HHSTSEEEEEEESEE
T ss_pred cccccccccc-ccccccccceeeeccccCCC-----CCcccccccccchhhhHHHHHHHHHHH--HhcCCCEEEEECcEe
Confidence 3344444444 5578999998755 222221 1111111111112334443 3333 345999999999999
Q ss_pred eecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhc
Q 042656 98 IGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAAT 164 (289)
Q Consensus 98 ~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~ 164 (289)
||.... ...+ +. ++.. ...+.++.+++|++++.+++
T Consensus 147 ~~~~~~---------------------~~~~--~~----~~~~----~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 147 YGNPSR---------------------SYRL--IK----EGGP----QGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp EBTTSS---------------------SEEE--ES----STST----TSHCEEEHHHHHHHHHHHHH
T ss_pred EeCCCc---------------------ceeE--Ee----ccCC----CCcCcCCHHHHHHHHHHHhC
Confidence 999632 1111 00 2221 34478889999999999886
No 77
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.056 Score=48.80 Aligned_cols=144 Identities=6% Similarity=-0.024 Sum_probs=80.8
Q ss_pred CCchhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh--------
Q 042656 14 DPSLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS-------- 82 (289)
Q Consensus 14 ~p~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e-------- 82 (289)
+....+.+|+.++.+.++.+. ...+.++...++. .+. ..+ .| +...|...+...+
T Consensus 99 ~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS--~~~----~~~----~~----~~~~Y~~sK~a~~~~~~~l~~ 164 (276)
T PRK06482 99 QIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSS--EGG----QIA----YP----GFSLYHATKWGIEGFVEAVAQ 164 (276)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcC--ccc----ccC----CC----CCchhHHHHHHHHHHHHHHHH
Confidence 345667789999999888853 3456566555331 111 111 11 2233654433222
Q ss_pred --cCCCceEEEeccCce---eecCCC--ch---hhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccch
Q 042656 83 --YSPAVTYSVHRSSII---IGASSR--SL---NNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDS 152 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V---~G~~~g--n~---~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~ 152 (289)
...++.++++||+.+ ||.... .. +.......++..+ ...++.. ..+.
T Consensus 165 ~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------------------~~d~ 221 (276)
T PRK06482 165 EVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRAL---ADGSFAI--------------------PGDP 221 (276)
T ss_pred HhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHH---hhccCCC--------------------CCCH
Confidence 236899999999988 665321 11 1110000111111 1111111 2356
Q ss_pred HHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhC
Q 042656 153 RVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFD 195 (289)
Q Consensus 153 ~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G 195 (289)
+.++++++.++..+. .+..||+++|+..+..++...+.+.++
T Consensus 222 ~~~~~a~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 222 QKMVQAMIASADQTP-APRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred HHHHHHHHHHHcCCC-CCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 779999999997653 356799999998777777776666553
No 78
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.43 E-value=0.083 Score=46.12 Aligned_cols=127 Identities=8% Similarity=0.001 Sum_probs=73.8
Q ss_pred CCchhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHH-----HHHh---
Q 042656 14 DPSLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVED-----IAAS--- 82 (289)
Q Consensus 14 ~p~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd-----~L~e--- 82 (289)
++...+..|+.+..+.++.+. ...|.+++..++.. +. ..+. .+..-|...+ .+..
T Consensus 107 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~--~~----~~~~--------~~~~~y~~sK~~~~~~~~~~~~ 172 (249)
T PRK12825 107 EWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSV--AG----LPGW--------PGRSNYAAAKAGLVGLTKALAR 172 (249)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcc--cc----CCCC--------CCchHHHHHHHHHHHHHHHHHH
Confidence 345567778888888887753 35666777663311 00 1111 1122244433 2222
Q ss_pred --cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHH
Q 042656 83 --YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQI 160 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i 160 (289)
...++.++++||+.++|+...+.... ... ......++ ..+++.+.+|+++.
T Consensus 173 ~~~~~~i~~~~i~pg~~~~~~~~~~~~~-~~~--------~~~~~~~~------------------~~~~~~~dva~~~~ 225 (249)
T PRK12825 173 ELAEYGITVNMVAPGDIDTDMKEATIEE-ARE--------AKDAETPL------------------GRSGTPEDIARAVA 225 (249)
T ss_pred HHhhcCeEEEEEEECCccCCccccccch-hHH--------hhhccCCC------------------CCCcCHHHHHHHHH
Confidence 23689999999999999864222111 000 01001222 11566778999999
Q ss_pred HHhcCCC--cCCCeeEecCCCcc
Q 042656 161 WAATTDR--AKNQAFNCTNGDVF 181 (289)
Q Consensus 161 ~aa~~p~--a~ge~FNi~dg~~~ 181 (289)
+++.++. ..|+.|+|++|..+
T Consensus 226 ~~~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 226 FLCSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred HHhCccccCcCCCEEEeCCCEee
Confidence 9997764 35899999998754
No 79
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=95.01 E-value=0.85 Score=41.73 Aligned_cols=150 Identities=20% Similarity=0.242 Sum_probs=85.2
Q ss_pred hhhccChHHHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCC-------ChHHHHHHHHh-------
Q 042656 17 LTVGASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPN-------FYYAVEDIAAS------- 82 (289)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~-------fyy~qEd~L~e------- 82 (289)
+...+|.+|+.|.|+- +-+-..|.++-..... |-.++||+|.|+ --|...+.-+|
T Consensus 131 LA~~VNI~GvHNil~v-Aa~~kL~iFVPSTIGA----------FGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~ 199 (366)
T KOG2774|consen 131 LALQVNIRGVHNILQV-AAKHKLKVFVPSTIGA----------FGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFN 199 (366)
T ss_pred eeeeecchhhhHHHHH-HHHcCeeEeecccccc----------cCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHH
Confidence 4567899999999987 6666666666511223 445677777663 24776665555
Q ss_pred cCCCceEEEeccCceeecCC-C-chhhhHHHHHHHHHHHHHhCC-CeEEEeccccCCCCCcccccccccccchHHHHHHH
Q 042656 83 YSPAVTYSVHRSSIIIGASS-R-SLNNSLLTLAVYATICRHQGL-PFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQ 159 (289)
Q Consensus 83 ~~~g~~~~ivRP~~V~G~~~-g-n~~nl~~~l~vyaal~~~~g~-pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~ 159 (289)
...|+.+-.+|.+-|+...+ | .--..+.++ .|-|+ ..|. .++. +|.+ ..-+.|..+.-++.
T Consensus 200 hrFg~dfr~~rfPg~is~~~pgggttdya~A~-f~~Al--~~gk~tCyl-------rpdt------rlpmmy~~dc~~~~ 263 (366)
T KOG2774|consen 200 HRFGVDFRSMRFPGIISATKPGGGTTDYAIAI-FYDAL--QKGKHTCYL-------RPDT------RLPMMYDTDCMASV 263 (366)
T ss_pred hhcCccceecccCcccccCCCCCCcchhHHHH-HHHHH--HcCCccccc-------CCCc------cCceeehHHHHHHH
Confidence 34588888999888887753 3 222222222 23333 2232 1222 1221 12233333333333
Q ss_pred HHHhcCC--CcCCCeeEecCCCccCHHHHHHHHHHHh
Q 042656 160 IWAATTD--RAKNQAFNCTNGDVFTWKSLWKLLSEIF 194 (289)
Q Consensus 160 i~aa~~p--~a~ge~FNi~dg~~~s~~~lw~~la~~~ 194 (289)
+..+..| .-+-.+|||+ |-.||-+|+...|.+.+
T Consensus 264 ~~~~~a~~~~lkrr~ynvt-~~sftpee~~~~~~~~~ 299 (366)
T KOG2774|consen 264 IQLLAADSQSLKRRTYNVT-GFSFTPEEIADAIRRVM 299 (366)
T ss_pred HHHHhCCHHHhhhheeeec-eeccCHHHHHHHHHhhC
Confidence 3333333 3467899998 57788898888886653
No 80
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.51 E-value=0.39 Score=43.22 Aligned_cols=147 Identities=12% Similarity=0.040 Sum_probs=81.9
Q ss_pred cCCchhhccChHHHHHhhhhHhh---hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-------
Q 042656 13 SDPSLTVGASSRSLHNSLLPLAV---HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS------- 82 (289)
Q Consensus 13 ~~p~~~~~~~~~~~~~~l~~~~l---~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e------- 82 (289)
++...++..|+.+....++.+.- ..+..+...++.. .+ ....| +...|...+...+
T Consensus 109 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~-~~---------~~~~~----~~~~Y~~sK~a~~~~~~~~~ 174 (276)
T PRK05875 109 DAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSI-AA---------SNTHR----WFGAYGVTKSAVDHLMKLAA 174 (276)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEech-hh---------cCCCC----CCcchHHHHHHHHHHHHHHH
Confidence 33456678889998888876432 1222233332210 00 00011 1233555443333
Q ss_pred ---cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHH
Q 042656 83 ---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQ 159 (289)
Q Consensus 83 ---~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~ 159 (289)
...+..++++||+.|.++-.......-. ...-. ....|++- +.+++.+|+++
T Consensus 175 ~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~----~~~~~-~~~~~~~~--------------------~~~~~dva~~~ 229 (276)
T PRK05875 175 DELGPSWVRVNSIRPGLIRTDLVAPITESPE----LSADY-RACTPLPR--------------------VGEVEDVANLA 229 (276)
T ss_pred HHhcccCeEEEEEecCccCCccccccccCHH----HHHHH-HcCCCCCC--------------------CcCHHHHHHHH
Confidence 2457999999999987653211111000 00000 01223222 33467799999
Q ss_pred HHHhcCCCc--CCCeeEecCCCcc----CHHHHHHHHHHHhCCCC
Q 042656 160 IWAATTDRA--KNQAFNCTNGDVF----TWKSLWKLLSEIFDVEF 198 (289)
Q Consensus 160 i~aa~~p~a--~ge~FNi~dg~~~----s~~~lw~~la~~~G~~~ 198 (289)
.+++.++.. .|+.+|+..|..+ +..|+...+.+..|..+
T Consensus 230 ~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 274 (276)
T PRK05875 230 MFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLRG 274 (276)
T ss_pred HHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHHhh
Confidence 999987654 4899999998876 88888888876666543
No 81
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.12 Score=46.79 Aligned_cols=153 Identities=8% Similarity=-0.041 Sum_probs=84.1
Q ss_pred cccCCchhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-----
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS----- 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e----- 82 (289)
+.++....+.+|+.++...++.+. ...+.++...++. ..+ ..|. | ....|...+...+
T Consensus 97 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS-~~~-----~~~~----~----~~~~Y~~sKaa~~~~~~~ 162 (275)
T PRK08263 97 TESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISS-IGG-----ISAF----P----MSGIYHASKWALEGMSEA 162 (275)
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcC-hhh-----cCCC----C----CccHHHHHHHHHHHHHHH
Confidence 344556778899999888887753 3455555544221 101 1110 0 1223554443322
Q ss_pred -----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccc-cchHHHH
Q 042656 83 -----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDM-SDSRVLA 156 (289)
Q Consensus 83 -----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~-~~~~~la 156 (289)
...++.++++||+.+..+..+..+........+..+....+... ....+ .+.+.+|
T Consensus 163 la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~p~dva 224 (275)
T PRK08263 163 LAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQW------------------SERSVDGDPEAAA 224 (275)
T ss_pred HHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHH------------------HhccCCCCHHHHH
Confidence 24689999999998876532111000000001111101110000 12223 6788899
Q ss_pred HHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhC
Q 042656 157 EQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFD 195 (289)
Q Consensus 157 ~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G 195 (289)
++++.+++++...++.++.+.++.+++.++...|+++-+
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 225 EALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred HHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence 999999988866777555555578888888888887643
No 82
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.07 E-value=0.17 Score=44.95 Aligned_cols=75 Identities=12% Similarity=0.039 Sum_probs=47.6
Q ss_pred CCCceEEEeccCceeecCCCchh-hhHHHHHHHHHHHHHhCCC-----eEEEeccccCCCCCcccccccccccchHHHHH
Q 042656 84 SPAVTYSVHRSSIIIGASSRSLN-NSLLTLAVYATICRHQGLP-----FRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAE 157 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~gn~~-nl~~~l~vyaal~~~~g~p-----l~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~ 157 (289)
..++..+++||+.|+++...+.+ +.+. ..+.. ..+ .+.. ....++++++.+|+
T Consensus 177 ~~~i~v~~v~pg~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~dva~ 235 (262)
T PRK13394 177 KHNVRSHVVCPGFVRTPLVDKQIPEQAK----------ELGISEEEVVKKV--------MLGK---TVDGVFTTVEDVAQ 235 (262)
T ss_pred hcCeEEEEEeeCcccchhhhhhhHhhhh----------ccCCChHHHHHHH--------HhcC---CCCCCCCCHHHHHH
Confidence 36899999999999998643222 1110 00100 001 1111 14567899999999
Q ss_pred HHHHHhcCCCc--CCCeeEecCCC
Q 042656 158 QQIWAATTDRA--KNQAFNCTNGD 179 (289)
Q Consensus 158 ~~i~aa~~p~a--~ge~FNi~dg~ 179 (289)
++++++..+.+ .|+.|++..|.
T Consensus 236 a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 236 TVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred HHHHHcCccccCCcCCEEeeCCce
Confidence 99999876543 48999999874
No 83
>PRK07806 short chain dehydrogenase; Provisional
Probab=93.52 E-value=0.25 Score=43.63 Aligned_cols=133 Identities=14% Similarity=0.032 Sum_probs=74.5
Q ss_pred cCCchhhccChHHHHHhhhhHhh--hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh--------
Q 042656 13 SDPSLTVGASSRSLHNSLLPLAV--HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS-------- 82 (289)
Q Consensus 13 ~~p~~~~~~~~~~~~~~l~~~~l--~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e-------- 82 (289)
.+|...+.+|+.++.+.++.+.- ..+ ++...++.. + ....|..+..|. ..-|...|...|
T Consensus 100 ~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS~--~---~~~~~~~~~~~~----~~~Y~~sK~a~e~~~~~l~~ 169 (248)
T PRK07806 100 MDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTSH--Q---AHFIPTVKTMPE----YEPVARSKRAGEDALRALRP 169 (248)
T ss_pred CCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeCc--h---hhcCccccCCcc----ccHHHHHHHHHHHHHHHHHH
Confidence 35777888999999999988542 122 233332210 0 001121122221 222555443333
Q ss_pred --cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCc-ccccccccccchHHHHHHH
Q 042656 83 --YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNK-YTWEHFCDMSDSRVLAEQQ 159 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~-~~~~~~~~~~~~~~la~~~ 159 (289)
...+..+++++|+.+-|+-....++ ... |+.. .......++.+++++|+++
T Consensus 170 ~~~~~~i~v~~v~pg~~~~~~~~~~~~--------------~~~------------~~~~~~~~~~~~~~~~~~dva~~~ 223 (248)
T PRK07806 170 ELAEKGIGFVVVSGDMIEGTVTATLLN--------------RLN------------PGAIEARREAAGKLYTVSEFAAEV 223 (248)
T ss_pred HhhccCeEEEEeCCccccCchhhhhhc--------------cCC------------HHHHHHHHhhhcccCCHHHHHHHH
Confidence 3468999999998876652111100 000 1100 0001223577889999999
Q ss_pred HHHhcCCCcCCCeeEecCCCcc
Q 042656 160 IWAATTDRAKNQAFNCTNGDVF 181 (289)
Q Consensus 160 i~aa~~p~a~ge~FNi~dg~~~ 181 (289)
+.+++++...|++|||.+|+..
T Consensus 224 ~~l~~~~~~~g~~~~i~~~~~~ 245 (248)
T PRK07806 224 ARAVTAPVPSGHIEYVGGADYF 245 (248)
T ss_pred HHHhhccccCccEEEecCccce
Confidence 9999977778999999998854
No 84
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=93.32 E-value=0.18 Score=44.58 Aligned_cols=76 Identities=13% Similarity=0.087 Sum_probs=47.0
Q ss_pred cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCe------EEEeccccCCCCCcccccccccccchHHHH
Q 042656 83 YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPF------RYLAIHGSSLSGNKYTWEHFCDMSDSRVLA 156 (289)
Q Consensus 83 ~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl------~f~~~~~~~~pG~~~~~~~~~~~~~~~~la 156 (289)
...+..++++||+.|+++.....+. . .....+.+. .++ ++. ...++++++++|
T Consensus 172 ~~~~i~v~~~~pg~v~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~-------~~~-----~~~~~~~~~d~a 230 (258)
T PRK12429 172 ATHGVTVNAICPGYVDTPLVRKQIP---D------LAKERGISEEEVLEDVLL-------PLV-----PQKRFTTVEEIA 230 (258)
T ss_pred cccCeEEEEEecCCCcchhhhhhhh---h------hccccCCChHHHHHHHHh-------ccC-----CccccCCHHHHH
Confidence 3468999999999999885422110 0 000112111 010 111 345689999999
Q ss_pred HHHHHHhcCCC--cCCCeeEecCCC
Q 042656 157 EQQIWAATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 157 ~~~i~aa~~p~--a~ge~FNi~dg~ 179 (289)
+++.+++..+. ..|+.||+.+|-
T Consensus 231 ~~~~~l~~~~~~~~~g~~~~~~~g~ 255 (258)
T PRK12429 231 DYALFLASFAAKGVTGQAWVVDGGW 255 (258)
T ss_pred HHHHHHcCccccCccCCeEEeCCCE
Confidence 99999887643 348999999874
No 85
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.26 E-value=0.33 Score=42.28 Aligned_cols=125 Identities=10% Similarity=0.064 Sum_probs=69.8
Q ss_pred CchhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHH-----HHHHh----
Q 042656 15 PSLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVE-----DIAAS---- 82 (289)
Q Consensus 15 p~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qE-----d~L~e---- 82 (289)
....+..|+.+..+.++.+. ...+.++...++.. .+ ..+. . +...|... ...+.
T Consensus 106 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~-~~-----~~~~------~--~~~~y~~sk~~~~~~~~~l~~~ 171 (246)
T PRK05653 106 WDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSV-SG-----VTGN------P--GQTNYSAAKAGVIGFTKALALE 171 (246)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcH-Hh-----ccCC------C--CCcHhHhHHHHHHHHHHHHHHH
Confidence 34557788888887777643 35566666653311 01 1111 1 11123332 22222
Q ss_pred -cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHH
Q 042656 83 -YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIW 161 (289)
Q Consensus 83 -~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~ 161 (289)
...+..++++||+.++|+.......... ... ... + ....+++.+.+|+++.+
T Consensus 172 ~~~~~i~~~~i~pg~~~~~~~~~~~~~~~-----~~~--~~~----~----------------~~~~~~~~~dva~~~~~ 224 (246)
T PRK05653 172 LASRGITVNAVAPGFIDTDMTEGLPEEVK-----AEI--LKE----I----------------PLGRLGQPEEVANAVAF 224 (246)
T ss_pred HhhcCeEEEEEEeCCcCCcchhhhhHHHH-----HHH--Hhc----C----------------CCCCCcCHHHHHHHHHH
Confidence 2458999999999999986532111110 000 011 1 12335667889999999
Q ss_pred HhcCC--CcCCCeeEecCCCc
Q 042656 162 AATTD--RAKNQAFNCTNGDV 180 (289)
Q Consensus 162 aa~~p--~a~ge~FNi~dg~~ 180 (289)
++... ...|+.|++++|..
T Consensus 225 ~~~~~~~~~~g~~~~~~gg~~ 245 (246)
T PRK05653 225 LASDAASYITGQVIPVNGGMY 245 (246)
T ss_pred HcCchhcCccCCEEEeCCCee
Confidence 88643 34689999999864
No 86
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=93.10 E-value=0.72 Score=47.08 Aligned_cols=139 Identities=9% Similarity=0.042 Sum_probs=79.9
Q ss_pred CchhhccChHHHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCC-Ch----HHHHHHHHhcCCCceE
Q 042656 15 PSLTVGASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPN-FY----YAVEDIAASYSPAVTY 89 (289)
Q Consensus 15 p~~~~~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~-fy----y~qEd~L~e~~~g~~~ 89 (289)
+...+.+|..++.+.++. +...|+++++.++. +|. ....+.+. .. ... .| ..+|+.|. ..|+.|
T Consensus 177 ~~~~~~VN~~Gt~nLl~A-a~~agVgRIV~VSS--iga---~~~g~p~~-~~--~sk~~~~~~KraaE~~L~--~sGIrv 245 (576)
T PLN03209 177 VTGPYRIDYLATKNLVDA-ATVAKVNHFILVTS--LGT---NKVGFPAA-IL--NLFWGVLCWKRKAEEALI--ASGLPY 245 (576)
T ss_pred hhhHHHHHHHHHHHHHHH-HHHhCCCEEEEEcc--chh---cccCcccc-ch--hhHHHHHHHHHHHHHHHH--HcCCCE
Confidence 334456678888888888 56778888887552 111 01111111 10 111 12 23355554 468999
Q ss_pred EEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCC-c
Q 042656 90 SVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDR-A 168 (289)
Q Consensus 90 ~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~-a 168 (289)
++|||+.++++..+.... .+ +... .++ . .+.-.+..+.||++++.++.+++ .
T Consensus 246 TIVRPG~L~tp~d~~~~t--------------~~--v~~~-------~~d-~---~~gr~isreDVA~vVvfLasd~~as 298 (576)
T PLN03209 246 TIVRPGGMERPTDAYKET--------------HN--LTLS-------EED-T---LFGGQVSNLQVAELMACMAKNRRLS 298 (576)
T ss_pred EEEECCeecCCccccccc--------------cc--eeec-------ccc-c---cCCCccCHHHHHHHHHHHHcCchhc
Confidence 999999998874321100 00 0110 000 0 11113455679999999998776 4
Q ss_pred CCCeeEecCCC---ccCHHHHHHHHH
Q 042656 169 KNQAFNCTNGD---VFTWKSLWKLLS 191 (289)
Q Consensus 169 ~ge~FNi~dg~---~~s~~~lw~~la 191 (289)
.+.+|.|.+++ .-.+.++|..|-
T Consensus 299 ~~kvvevi~~~~~p~~~~~~~~~~ip 324 (576)
T PLN03209 299 YCKVVEVIAETTAPLTPMEELLAKIP 324 (576)
T ss_pred cceEEEEEeCCCCCCCCHHHHHHhcc
Confidence 68999999886 356777776654
No 87
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=92.83 E-value=0.13 Score=45.28 Aligned_cols=36 Identities=17% Similarity=0.101 Sum_probs=28.9
Q ss_pred ccccccchHHHHHHHHHHhcCCC--cCCCeeEecCCCc
Q 042656 145 HFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 180 (289)
Q Consensus 145 ~~~~~~~~~~la~~~i~aa~~p~--a~ge~FNi~dg~~ 180 (289)
..+++++++.+|+++++++.++. ..|+.||+.+|..
T Consensus 216 ~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~ 253 (255)
T TIGR01963 216 PTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWT 253 (255)
T ss_pred ccccCcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence 45578889999999999998753 3589999998753
No 88
>PRK07074 short chain dehydrogenase; Provisional
Probab=92.75 E-value=0.18 Score=44.76 Aligned_cols=46 Identities=11% Similarity=0.152 Sum_probs=37.3
Q ss_pred cccccchHHHHHHHHHHhcCC--CcCCCeeEecCCCccCHHHHHHHHH
Q 042656 146 FCDMSDSRVLAEQQIWAATTD--RAKNQAFNCTNGDVFTWKSLWKLLS 191 (289)
Q Consensus 146 ~~~~~~~~~la~~~i~aa~~p--~a~ge~FNi~dg~~~s~~~lw~~la 191 (289)
..++.+++.+++++++++..+ ...|+.+++.+|...+..+|.+.+.
T Consensus 206 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~ 253 (257)
T PRK07074 206 LQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLT 253 (257)
T ss_pred CCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhc
Confidence 356788889999999999654 3358999999999998988877663
No 89
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=92.40 E-value=0.77 Score=40.20 Aligned_cols=130 Identities=8% Similarity=0.022 Sum_probs=72.4
Q ss_pred cccCCchhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHH-----HHh
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDI-----AAS 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~-----L~e 82 (289)
+.+++...+..|+.++...++.+. ...+.++....+.. .+. ..|. .+...|...+. +..
T Consensus 103 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~-~~~----~~~~--------~~~~~y~~sK~a~~~~~~~ 169 (251)
T PRK12826 103 DDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSV-AGP----RVGY--------PGLAHYAASKAGLVGFTRA 169 (251)
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEech-Hhh----ccCC--------CCccHHHHHHHHHHHHHHH
Confidence 344556677888888888887753 34555555542210 000 0111 12334665432 222
Q ss_pred -----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHH
Q 042656 83 -----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAE 157 (289)
Q Consensus 83 -----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~ 157 (289)
...++..+++||+.++|+..++...... .. .+ ..+. |+ . .+++++.+|+
T Consensus 170 ~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~-~~---~~--~~~~--~~--------~----------~~~~~~dva~ 223 (251)
T PRK12826 170 LALELAARNITVNSVHPGGVDTPMAGNLGDAQW-AE---AI--AAAI--PL--------G----------RLGEPEDIAA 223 (251)
T ss_pred HHHHHHHcCeEEEEEeeCCCCcchhhhcCchHH-HH---HH--HhcC--CC--------C----------CCcCHHHHHH
Confidence 2458999999999999986532211110 00 00 1122 22 1 2556677999
Q ss_pred HHHHHhcCCC--cCCCeeEecCCC
Q 042656 158 QQIWAATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 158 ~~i~aa~~p~--a~ge~FNi~dg~ 179 (289)
++..++..+. ..||.|++.+|.
T Consensus 224 ~~~~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 224 AVLFLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred HHHHHhCccccCcCCcEEEECCCc
Confidence 9988876653 368999997665
No 90
>PRK09134 short chain dehydrogenase; Provisional
Probab=92.26 E-value=0.63 Score=41.46 Aligned_cols=35 Identities=14% Similarity=0.264 Sum_probs=30.0
Q ss_pred cchHHHHHHHHHHhcCCCcCCCeeEecCCCccCHH
Q 042656 150 SDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWK 184 (289)
Q Consensus 150 ~~~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~ 184 (289)
.+++.+|+++++++.++...|+.|++..|...+|+
T Consensus 215 ~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 215 STPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred cCHHHHHHHHHHHhcCCCcCCCEEEECCCeecccc
Confidence 45778999999999988778999999999877775
No 91
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=92.00 E-value=0.39 Score=42.75 Aligned_cols=138 Identities=12% Similarity=0.100 Sum_probs=74.3
Q ss_pred cccCCchhhccChHHHHHhhhhHhh---hccC-ceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHH-----HH
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAV---HTNI-CKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDI-----AA 81 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l---~tG~-k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~-----L~ 81 (289)
+.++....+.+|+.+....++.+.- ..+. .+...++. ..+ ..|. ++..-|...+. .+
T Consensus 100 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS-~~~-----~~~~--------~~~~~Y~~sK~a~~~~~~ 165 (257)
T PRK07067 100 SRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMAS-QAG-----RRGE--------ALVSHYCATKAAVISYTQ 165 (257)
T ss_pred CHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCC-HHh-----CCCC--------CCCchhhhhHHHHHHHHH
Confidence 3455667788999999999988532 1111 12222111 001 1111 12233554333 22
Q ss_pred h-----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCC----eEEEeccccCCCCCcccccccccccch
Q 042656 82 S-----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLP----FRYLAIHGSSLSGNKYTWEHFCDMSDS 152 (289)
Q Consensus 82 e-----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~p----l~f~~~~~~~~pG~~~~~~~~~~~~~~ 152 (289)
. ...++..+++||+.|+++........ +++....+ ... .+.. .....+.+.
T Consensus 166 ~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~ 225 (257)
T PRK07067 166 SAALALIRHGINVNAIAPGVVDTPMWDQVDAL---------FARYENRPPGEKKRL--------VGEA---VPLGRMGVP 225 (257)
T ss_pred HHHHHhcccCeEEEEEeeCcccchhhhhhhhh---------hhhccCCCHHHHHHH--------Hhhc---CCCCCccCH
Confidence 2 34689999999999998742111100 00000000 000 0111 134457788
Q ss_pred HHHHHHHHHHhcCCCc--CCCeeEecCCCccC
Q 042656 153 RVLAEQQIWAATTDRA--KNQAFNCTNGDVFT 182 (289)
Q Consensus 153 ~~la~~~i~aa~~p~a--~ge~FNi~dg~~~s 182 (289)
+++|+++++++.++.. .|+.|||..|..+|
T Consensus 226 ~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 226 DDLTGMALFLASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred HHHHHHHHHHhCcccccccCcEEeecCCEeCC
Confidence 8999999999976543 58999999887653
No 92
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=91.75 E-value=3 Score=37.00 Aligned_cols=102 Identities=16% Similarity=0.099 Sum_probs=74.2
Q ss_pred HHHHHHHHhcCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchH
Q 042656 74 YAVEDIAASYSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSR 153 (289)
Q Consensus 74 y~qEd~L~e~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~ 153 (289)
..+|+.+. ..++.|+++||...|.-....+ .... ...+.|+.- -+. .....++++
T Consensus 123 ~~~e~~l~--~sg~~~t~lr~~~~~~~~~~~~---~~~~-------~~~~~~~~~--------~~~-----~~~~~i~~~ 177 (275)
T COG0702 123 AAVEAALR--SSGIPYTTLRRAAFYLGAGAAF---IEAA-------EAAGLPVIP--------RGI-----GRLSPIAVD 177 (275)
T ss_pred HHHHHHHH--hcCCCeEEEecCeeeeccchhH---HHHH-------HhhCCceec--------CCC-----CceeeeEHH
Confidence 44555555 5799999999777766543211 1111 124555444 222 256677888
Q ss_pred HHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCCCC
Q 042656 154 VLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEFVP 200 (289)
Q Consensus 154 ~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~~~ 200 (289)
+++++...++..|...++.|.++..+..+..++-..|.+..|.+...
T Consensus 178 d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 178 DVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGRPVGL 224 (275)
T ss_pred HHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCCccee
Confidence 89999999999888889999999889999999999999999999876
No 93
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=91.72 E-value=1.4 Score=40.14 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=68.3
Q ss_pred hHHHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHH----HHHHHHhcCCCceEEEeccCcee
Q 042656 23 SRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYA----VEDIAASYSPAVTYSVHRSSIII 98 (289)
Q Consensus 23 ~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~----qEd~L~e~~~g~~~~ivRP~~V~ 98 (289)
-+...+.++. +--.|+++|..++...+|- .|+ . |..||. +|..|.. .....=+|+||+.||
T Consensus 139 g~ani~a~ka-a~~~gv~~fvyISa~d~~~-----~~~------i--~rGY~~gKR~AE~Ell~-~~~~rgiilRPGFiy 203 (283)
T KOG4288|consen 139 GTANINAVKA-AAKAGVPRFVYISAHDFGL-----PPL------I--PRGYIEGKREAEAELLK-KFRFRGIILRPGFIY 203 (283)
T ss_pred cHhhHHHHHH-HHHcCCceEEEEEhhhcCC-----CCc------c--chhhhccchHHHHHHHH-hcCCCceeeccceee
Confidence 3344444455 5678999998866544442 111 2 234544 5655554 334777999999999
Q ss_pred ecCC-CchhhhHHHHHHHHH-HHH-HhCCC-----eEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcCC
Q 042656 99 GASS-RSLNNSLLTLAVYAT-ICR-HQGLP-----FRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKN 170 (289)
Q Consensus 99 G~~~-gn~~nl~~~l~vyaa-l~~-~~g~p-----l~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~g 170 (289)
|... +.. -.+|.+..+ |.+ ..+++ ||+ -|. -+.--+.++.||.+.+.|+++|+-+|
T Consensus 204 g~R~v~g~---~~pL~~vg~pl~~~~~~a~k~~~kLp~--------lg~-----l~~ppvnve~VA~aal~ai~dp~f~G 267 (283)
T KOG4288|consen 204 GTRNVGGI---KSPLHTVGEPLEMVLKFALKPLNKLPL--------LGP-----LLAPPVNVESVALAALKAIEDPDFKG 267 (283)
T ss_pred cccccCcc---cccHHhhhhhHHHHHHhhhchhhcCcc--------ccc-----ccCCCcCHHHHHHHHHHhccCCCcCc
Confidence 9953 221 111211111 111 12333 666 443 56667788899999999999997654
No 94
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=90.06 E-value=0.61 Score=41.03 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=28.8
Q ss_pred cccchHHHHHHHHHHhcCCCcCCCeeEecCCCc
Q 042656 148 DMSDSRVLAEQQIWAATTDRAKNQAFNCTNGDV 180 (289)
Q Consensus 148 ~~~~~~~la~~~i~aa~~p~a~ge~FNi~dg~~ 180 (289)
.+++.+.+|++++.++..+...|+.||+..|..
T Consensus 214 ~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 214 KILDPEEVAEFVAAILKIESITGQVFVLDSGES 246 (252)
T ss_pred CCCCHHHHHHHHHHHhCccccCCCeEEecCCee
Confidence 578889999999999987777899999999864
No 95
>PRK12829 short chain dehydrogenase; Provisional
Probab=89.94 E-value=0.35 Score=42.88 Aligned_cols=81 Identities=11% Similarity=0.133 Sum_probs=46.1
Q ss_pred CCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHh
Q 042656 84 SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAA 163 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa 163 (289)
..+..++++||+.|+|+...+.+.. ..+..+.++.- . .+..........+++++++|+++..++
T Consensus 180 ~~~i~~~~l~pg~v~~~~~~~~~~~---------~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~d~a~~~~~l~ 243 (264)
T PRK12829 180 PLGIRVNAILPGIVRGPRMRRVIEA---------RAQQLGIGLDE--M-----EQEYLEKISLGRMVEPEDIAATALFLA 243 (264)
T ss_pred hcCeEEEEEecCCcCChHHHHHhhh---------hhhccCCChhH--H-----HHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 3589999999999999864322110 00011111100 0 000000001234788899999988887
Q ss_pred cCC--CcCCCeeEecCCCc
Q 042656 164 TTD--RAKNQAFNCTNGDV 180 (289)
Q Consensus 164 ~~p--~a~ge~FNi~dg~~ 180 (289)
... ...|+.|||++|..
T Consensus 244 ~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 244 SPAARYITGQAISVDGNVE 262 (264)
T ss_pred CccccCccCcEEEeCCCcc
Confidence 643 33589999999874
No 96
>PRK12828 short chain dehydrogenase; Provisional
Probab=88.58 E-value=2 Score=37.12 Aligned_cols=115 Identities=11% Similarity=0.065 Sum_probs=67.0
Q ss_pred chhhccChHHHHHhhhhHh---hhccCceeecccc-cccCccCCCCCCCCCCCCCCCCCCChHHHHHH-----HHh----
Q 042656 16 SLTVGASSRSLHNSLLPLA---VHTNICKYQGLPF-RYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDI-----AAS---- 82 (289)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~-~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~-----L~e---- 82 (289)
...+..|..++.+.++.+. ..++.++...++. ..++ |. ++...|...+. +..
T Consensus 107 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------~~--------~~~~~y~~sk~a~~~~~~~~a~~ 171 (239)
T PRK12828 107 DRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALK-------AG--------PGMGAYAAAKAGVARLTEALAAE 171 (239)
T ss_pred HHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhcc-------CC--------CCcchhHHHHHHHHHHHHHHHHH
Confidence 3456688888887776643 3456667665331 1111 10 12223443332 222
Q ss_pred -cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHH
Q 042656 83 -YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIW 161 (289)
Q Consensus 83 -~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~ 161 (289)
...++.++++||+.|+++... ...+.. ....+++++.+|+++.+
T Consensus 172 ~~~~~i~~~~i~pg~v~~~~~~------------------~~~~~~-----------------~~~~~~~~~dva~~~~~ 216 (239)
T PRK12828 172 LLDRGITVNAVLPSIIDTPPNR------------------ADMPDA-----------------DFSRWVTPEQIAAVIAF 216 (239)
T ss_pred hhhcCeEEEEEecCcccCcchh------------------hcCCch-----------------hhhcCCCHHHHHHHHHH
Confidence 245899999999999987210 011110 11125677889999999
Q ss_pred HhcCCCc--CCCeeEecCCCc
Q 042656 162 AATTDRA--KNQAFNCTNGDV 180 (289)
Q Consensus 162 aa~~p~a--~ge~FNi~dg~~ 180 (289)
+++.+.. .|+.+++.+|..
T Consensus 217 ~l~~~~~~~~g~~~~~~g~~~ 237 (239)
T PRK12828 217 LLSDEAQAITGASIPVDGGVA 237 (239)
T ss_pred HhCcccccccceEEEecCCEe
Confidence 8886533 589999988764
No 97
>PRK07774 short chain dehydrogenase; Provisional
Probab=88.49 E-value=3 Score=36.59 Aligned_cols=129 Identities=11% Similarity=0.132 Sum_probs=71.2
Q ss_pred cccCCchhhccChHHHHHhhhhHhh---hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHH-----HHh
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAV---HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDI-----AAS 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l---~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~-----L~e 82 (289)
+..+....+.+|+.+..+.++.+.- ..+.++....+.. ..+ . |...|.+.+. .+.
T Consensus 106 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~---------~~~------~--~~~~Y~~sK~a~~~~~~~ 168 (250)
T PRK07774 106 PWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSST---------AAW------L--YSNFYGLAKVGLNGLTQQ 168 (250)
T ss_pred CHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecc---------ccc------C--CccccHHHHHHHHHHHHH
Confidence 3445556788999999988877441 3334455542210 001 0 1112554433 222
Q ss_pred -----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHH
Q 042656 83 -----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAE 157 (289)
Q Consensus 83 -----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~ 157 (289)
...++..++++|+.|..+......... +.... -.+.|... +.+.+.+|+
T Consensus 169 l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~----~~~~~--~~~~~~~~--------------------~~~~~d~a~ 222 (250)
T PRK07774 169 LARELGGMNIRVNAIAPGPIDTEATRTVTPKE----FVADM--VKGIPLSR--------------------MGTPEDLVG 222 (250)
T ss_pred HHHHhCccCeEEEEEecCcccCccccccCCHH----HHHHH--HhcCCCCC--------------------CcCHHHHHH
Confidence 235899999999888766432111000 11111 12333322 223567999
Q ss_pred HHHHHhcCCC--cCCCeeEecCCCccC
Q 042656 158 QQIWAATTDR--AKNQAFNCTNGDVFT 182 (289)
Q Consensus 158 ~~i~aa~~p~--a~ge~FNi~dg~~~s 182 (289)
++++++..+. ..||.||+..|..++
T Consensus 223 ~~~~~~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 223 MCLFLLSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred HHHHHhChhhhCcCCCEEEECCCeecc
Confidence 9988887643 368999999987643
No 98
>PRK06914 short chain dehydrogenase; Provisional
Probab=88.34 E-value=2.3 Score=38.28 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=27.1
Q ss_pred ccchHHHHHHHHHHhcCCCcCCCeeEecCCCccCHH
Q 042656 149 MSDSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWK 184 (289)
Q Consensus 149 ~~~~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~ 184 (289)
+.+.+.+|+++++++.++... ..||+.++..++..
T Consensus 226 ~~~~~dva~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 260 (280)
T PRK06914 226 FGNPIDVANLIVEIAESKRPK-LRYPIGKGVKLMIL 260 (280)
T ss_pred cCCHHHHHHHHHHHHcCCCCC-cccccCCchHHHHH
Confidence 566788999999999887654 57999988765543
No 99
>PRK12827 short chain dehydrogenase; Provisional
Probab=86.79 E-value=4.7 Score=35.10 Aligned_cols=124 Identities=8% Similarity=0.027 Sum_probs=67.6
Q ss_pred cCCchhhccChHHHHHhhhhHh----hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHH-----HHh-
Q 042656 13 SDPSLTVGASSRSLHNSLLPLA----VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDI-----AAS- 82 (289)
Q Consensus 13 ~~p~~~~~~~~~~~~~~l~~~~----l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~-----L~e- 82 (289)
++....+..|..++...++.+. ..++.++...++... + ..+. .+...|...+. .+.
T Consensus 109 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~-~-----~~~~--------~~~~~y~~sK~a~~~~~~~l 174 (249)
T PRK12827 109 EEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVA-G-----VRGN--------RGQVNYAASKAGLIGLTKTL 174 (249)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCch-h-----cCCC--------CCCchhHHHHHHHHHHHHHH
Confidence 3445667889999888888754 134555555433100 0 1111 11222444332 222
Q ss_pred ----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHH
Q 042656 83 ----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQ 158 (289)
Q Consensus 83 ----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~ 158 (289)
...++.++++||+.|.++........ .... ...|+.. ..+.+.+|++
T Consensus 175 ~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~------~~~~---~~~~~~~--------------------~~~~~~va~~ 225 (249)
T PRK12827 175 ANELAPRGITVNAVAPGAINTPMADNAAPT------EHLL---NPVPVQR--------------------LGEPDEVAAL 225 (249)
T ss_pred HHHhhhhCcEEEEEEECCcCCCcccccchH------HHHH---hhCCCcC--------------------CcCHHHHHHH
Confidence 23589999999999999854222110 0000 1222111 2345679999
Q ss_pred HHHHhcCCC--cCCCeeEecCCC
Q 042656 159 QIWAATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 159 ~i~aa~~p~--a~ge~FNi~dg~ 179 (289)
+++++.... ..|+.|++.+|.
T Consensus 226 ~~~l~~~~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 226 VAFLVSDAASYVTGQVIPVDGGF 248 (249)
T ss_pred HHHHcCcccCCccCcEEEeCCCC
Confidence 888886542 357999997663
No 100
>PRK07775 short chain dehydrogenase; Provisional
Probab=85.33 E-value=2.4 Score=38.25 Aligned_cols=29 Identities=21% Similarity=0.124 Sum_probs=23.4
Q ss_pred ccccchHHHHHHHHHHhcCCCcCCCeeEec
Q 042656 147 CDMSDSRVLAEQQIWAATTDRAKNQAFNCT 176 (289)
Q Consensus 147 ~~~~~~~~la~~~i~aa~~p~a~ge~FNi~ 176 (289)
..+.+++.+|++++.++.++. .+++||+.
T Consensus 221 ~~~~~~~dva~a~~~~~~~~~-~~~~~~~~ 249 (274)
T PRK07775 221 DYFLRASDLARAITFVAETPR-GAHVVNME 249 (274)
T ss_pred ccccCHHHHHHHHHHHhcCCC-CCCeeEEe
Confidence 346788999999999998774 46789988
No 101
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=84.96 E-value=3 Score=36.10 Aligned_cols=125 Identities=13% Similarity=0.143 Sum_probs=66.7
Q ss_pred cccCCchhhccChHHHHHhhhhHhh---hccCceeecccc--cccCccCCCCCCCCCCCCCCCCCCChHHH-----HHHH
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAV---HTNICKYQGLPF--RYFGQLIGHDPPFKEDSVRLPFPNFYYAV-----EDIA 80 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l---~tG~k~yg~~~~--~~~g~~~~~~~P~~E~~pr~p~p~fyy~q-----Ed~L 80 (289)
+..++...+..|+.++...++.+.- ..+.++...++. ..+|. | +...|.. +.+.
T Consensus 96 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~------~----------~~~~y~~~k~a~~~~~ 159 (239)
T TIGR01830 96 KEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN------A----------GQANYAASKAGVIGFT 159 (239)
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC------C----------CCchhHHHHHHHHHHH
Confidence 3345566778898888888877432 244445554331 11211 1 1112332 2222
Q ss_pred Hh-----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHH
Q 042656 81 AS-----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVL 155 (289)
Q Consensus 81 ~e-----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~l 155 (289)
+. ...+..++++||+.+.++......... ...+ ....|+.. ..+.+.+
T Consensus 160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~-----~~~~--~~~~~~~~--------------------~~~~~~~ 212 (239)
T TIGR01830 160 KSLAKELASRNITVNAVAPGFIDTDMTDKLSEKV-----KKKI--LSQIPLGR--------------------FGTPEEV 212 (239)
T ss_pred HHHHHHHhhcCeEEEEEEECCCCChhhhhcChHH-----HHHH--HhcCCcCC--------------------CcCHHHH
Confidence 22 346899999999988664322111110 0011 12223221 2346779
Q ss_pred HHHHHHHhcCCC--cCCCeeEecCC
Q 042656 156 AEQQIWAATTDR--AKNQAFNCTNG 178 (289)
Q Consensus 156 a~~~i~aa~~p~--a~ge~FNi~dg 178 (289)
|+++++++..++ ..|+.||+..|
T Consensus 213 a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 213 ANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred HHHHHHHhCcccCCcCCCEEEeCCC
Confidence 999998886543 36899999765
No 102
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=82.68 E-value=9.1 Score=33.48 Aligned_cols=126 Identities=13% Similarity=0.092 Sum_probs=69.7
Q ss_pred cCCchhhccChHHHHHhhhhHhh---hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHH-----HHh--
Q 042656 13 SDPSLTVGASSRSLHNSLLPLAV---HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDI-----AAS-- 82 (289)
Q Consensus 13 ~~p~~~~~~~~~~~~~~l~~~~l---~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~-----L~e-- 82 (289)
.++...+.+|+.++...++.+.- ..+.++...++. ..|. .+ .. +..-|...+. ...
T Consensus 106 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS-~~~~-----~~------~~--~~~~Y~~sK~a~~~~~~~l~ 171 (247)
T PRK12935 106 EDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS-IIGQ-----AG------GF--GQTNYSAAKAGMLGFTKSLA 171 (247)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc-hhhc-----CC------CC--CCcchHHHHHHHHHHHHHHH
Confidence 55666788999998888877432 233344444221 1111 11 01 1122554333 211
Q ss_pred ---cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHH
Q 042656 83 ---YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQ 159 (289)
Q Consensus 83 ---~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~ 159 (289)
...+...++++|+.|.++........ ....+. .+ ...+++...+.+++++
T Consensus 172 ~~~~~~~i~v~~v~pg~v~t~~~~~~~~~-----~~~~~~--~~--------------------~~~~~~~~~edva~~~ 224 (247)
T PRK12935 172 LELAKTNVTVNAICPGFIDTEMVAEVPEE-----VRQKIV--AK--------------------IPKKRFGQADEIAKGV 224 (247)
T ss_pred HHHHHcCcEEEEEEeCCCcChhhhhccHH-----HHHHHH--Hh--------------------CCCCCCcCHHHHHHHH
Confidence 24589999999999876532111000 000000 01 1233467888899999
Q ss_pred HHHhcCCC-cCCCeeEecCCC
Q 042656 160 IWAATTDR-AKNQAFNCTNGD 179 (289)
Q Consensus 160 i~aa~~p~-a~ge~FNi~dg~ 179 (289)
++++.... ..||.||+..|.
T Consensus 225 ~~~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 225 VYLCRDGAYITGQQLNINGGL 245 (247)
T ss_pred HHHcCcccCccCCEEEeCCCc
Confidence 99986543 368999999874
No 103
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=82.08 E-value=6 Score=34.64 Aligned_cols=124 Identities=10% Similarity=0.050 Sum_probs=67.7
Q ss_pred hhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh----------cC
Q 042656 18 TVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS----------YS 84 (289)
Q Consensus 18 ~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e----------~~ 84 (289)
++.+|..++...++.+. ..++.++...++. .+. ..+.. +...|...+...+ ..
T Consensus 109 ~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS--~~~----------~~~~~--~~~~y~~sK~a~~~~~~~~~~~~~~ 174 (250)
T PRK08063 109 TMNINAKALLFCAQEAAKLMEKVGGGKIISLSS--LGS----------IRYLE--NYTTVGVSKAALEALTRYLAVELAP 174 (250)
T ss_pred HHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc--hhh----------ccCCC--CccHHHHHHHHHHHHHHHHHHHHhH
Confidence 46688888888887754 2355556665331 110 11111 1223554333332 23
Q ss_pred CCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhc
Q 042656 85 PAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAAT 164 (289)
Q Consensus 85 ~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~ 164 (289)
.+..+++++|+.|..+....+..... +...+ .. ..++ ..+.+.+.+|+++++++.
T Consensus 175 ~~i~v~~i~pg~v~t~~~~~~~~~~~---~~~~~---~~-~~~~------------------~~~~~~~dva~~~~~~~~ 229 (250)
T PRK08063 175 KGIAVNAVSGGAVDTDALKHFPNREE---LLEDA---RA-KTPA------------------GRMVEPEDVANAVLFLCS 229 (250)
T ss_pred hCeEEEeEecCcccCchhhhccCchH---HHHHH---hc-CCCC------------------CCCcCHHHHHHHHHHHcC
Confidence 68999999999997664311111000 00001 00 0112 124667889999999998
Q ss_pred CCCc--CCCeeEecCCCc
Q 042656 165 TDRA--KNQAFNCTNGDV 180 (289)
Q Consensus 165 ~p~a--~ge~FNi~dg~~ 180 (289)
++.. .|+.|++..|..
T Consensus 230 ~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 230 PEADMIRGQTIIVDGGRS 247 (250)
T ss_pred chhcCccCCEEEECCCee
Confidence 7643 589999887754
No 104
>PRK06196 oxidoreductase; Provisional
Probab=81.80 E-value=28 Score=32.03 Aligned_cols=80 Identities=10% Similarity=-0.060 Sum_probs=43.9
Q ss_pred chhhccChHHHHHhhhhHh---hhccCceeeccc-ccccCccCCCCCCCCCCCCC--CC-CCCChHHHHHHHHh------
Q 042656 16 SLTVGASSRSLHNSLLPLA---VHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVR--LP-FPNFYYAVEDIAAS------ 82 (289)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr--~p-~p~fyy~qEd~L~e------ 82 (289)
...+.+|+.+....++.+. ..++.++...++ ..+. ..+..++++. .+ .+..-|.+.+...+
T Consensus 122 ~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~------~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l 195 (315)
T PRK06196 122 EAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHR------RSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHL 195 (315)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhc------cCCCCccccCccCCCChHHHHHHHHHHHHHHHHHH
Confidence 4457889999777776543 244444555433 1111 1122222221 11 22334665544332
Q ss_pred ----cCCCceEEEeccCceeecC
Q 042656 83 ----YSPAVTYSVHRSSIIIGAS 101 (289)
Q Consensus 83 ----~~~g~~~~ivRP~~V~G~~ 101 (289)
...++.++++||+.|.++-
T Consensus 196 a~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 196 DKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred HHHhcCCCcEEEEeeCCcccCCc
Confidence 3468999999999998874
No 105
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=80.65 E-value=20 Score=31.17 Aligned_cols=127 Identities=9% Similarity=0.014 Sum_probs=65.4
Q ss_pred chhhccChHHHHHhhhhHh---hhccCceeecccc-cccCccCCCCCCCCCCCCCCCCCCChHHHHHH--------HHh-
Q 042656 16 SLTVGASSRSLHNSLLPLA---VHTNICKYQGLPF-RYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDI--------AAS- 82 (289)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~-~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~--------L~e- 82 (289)
...+.+|+.+....++.+. ..++.++...++. ..++ +. + ...-|...+. ++.
T Consensus 105 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~-------~~----~----~~~~Y~~sK~a~~~~~~~la~~ 169 (250)
T TIGR03206 105 ERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARV-------GS----S----GEAVYAACKGGLVAFSKTMARE 169 (250)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhcc-------CC----C----CCchHHHHHHHHHHHHHHHHHH
Confidence 3457788888887766643 2455555554331 1111 10 0 0112554442 221
Q ss_pred -cCCCceEEEeccCceeecCCCchhhhH-HHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHH
Q 042656 83 -YSPAVTYSVHRSSIIIGASSRSLNNSL-LTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQI 160 (289)
Q Consensus 83 -~~~g~~~~ivRP~~V~G~~~gn~~nl~-~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i 160 (289)
...++.++++||+.++++......... ..--++..+ ....|+.. +...+.+|++++
T Consensus 170 ~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--------------------~~~~~dva~~~~ 227 (250)
T TIGR03206 170 HARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAF--TRAIPLGR--------------------LGQPDDLPGAIL 227 (250)
T ss_pred HhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHH--HhcCCccC--------------------CcCHHHHHHHHH
Confidence 235899999999999988422111000 000000111 12223222 223456999999
Q ss_pred HHhcCCC--cCCCeeEecCCC
Q 042656 161 WAATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 161 ~aa~~p~--a~ge~FNi~dg~ 179 (289)
+++.++. ..||.|++..|.
T Consensus 228 ~l~~~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 228 FFSSDDASFITGQVLSVSGGL 248 (250)
T ss_pred HHcCcccCCCcCcEEEeCCCc
Confidence 9887653 368999997663
No 106
>PRK08324 short chain dehydrogenase; Validated
Probab=80.53 E-value=3.9 Score=42.52 Aligned_cols=78 Identities=9% Similarity=0.118 Sum_probs=48.2
Q ss_pred CCCceEEEeccCcee-ecCC-CchhhhHHHHHHHHHHHHHhCCCeE----EEeccccCCCCCcccccccccccchHHHHH
Q 042656 84 SPAVTYSVHRSSIII-GASS-RSLNNSLLTLAVYATICRHQGLPFR----YLAIHGSSLSGNKYTWEHFCDMSDSRVLAE 157 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~-G~~~-gn~~nl~~~l~vyaal~~~~g~pl~----f~~~~~~~~pG~~~~~~~~~~~~~~~~la~ 157 (289)
..++.+++++|+.|| |... ...+.... . +..|.+.. + .++. ..++++++++.+|+
T Consensus 591 ~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~-~-------~~~g~~~~~~~~~--------~~~~---~~l~~~v~~~DvA~ 651 (681)
T PRK08324 591 PDGIRVNGVNPDAVVRGSGIWTGEWIEAR-A-------AAYGLSEEELEEF--------YRAR---NLLKREVTPEDVAE 651 (681)
T ss_pred ccCeEEEEEeCceeecCCccccchhhhhh-h-------hhccCChHHHHHH--------HHhc---CCcCCccCHHHHHH
Confidence 357999999999999 5542 11111100 0 01232211 1 1111 25667889999999
Q ss_pred HHHHHhc--CCCcCCCeeEecCCCc
Q 042656 158 QQIWAAT--TDRAKNQAFNCTNGDV 180 (289)
Q Consensus 158 ~~i~aa~--~p~a~ge~FNi~dg~~ 180 (289)
++.+++. .+...|+.|||..|..
T Consensus 652 a~~~l~s~~~~~~tG~~i~vdgG~~ 676 (681)
T PRK08324 652 AVVFLASGLLSKTTGAIITVDGGNA 676 (681)
T ss_pred HHHHHhCccccCCcCCEEEECCCch
Confidence 9999884 3445689999998864
No 107
>PRK06123 short chain dehydrogenase; Provisional
Probab=80.30 E-value=6.8 Score=34.27 Aligned_cols=70 Identities=13% Similarity=0.275 Sum_probs=42.5
Q ss_pred CCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHh
Q 042656 84 SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAA 163 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa 163 (289)
..++.++++||+.|+|+-...... ... ...+ ....|+.. .| +.+.+++++++.+
T Consensus 177 ~~~i~v~~i~pg~v~~~~~~~~~~-~~~---~~~~--~~~~p~~~--------~~------------~~~d~a~~~~~l~ 230 (248)
T PRK06123 177 AEGIRVNAVRPGVIYTEIHASGGE-PGR---VDRV--KAGIPMGR--------GG------------TAEEVARAILWLL 230 (248)
T ss_pred ccCeEEEEEecCcccCchhhccCC-HHH---HHHH--HhcCCCCC--------Cc------------CHHHHHHHHHHHh
Confidence 458999999999999984211100 000 0011 12334433 22 4567999999988
Q ss_pred cCCC--cCCCeeEecCCC
Q 042656 164 TTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 164 ~~p~--a~ge~FNi~dg~ 179 (289)
.... ..|+.|||..|+
T Consensus 231 ~~~~~~~~g~~~~~~gg~ 248 (248)
T PRK06123 231 SDEASYTTGTFIDVSGGR 248 (248)
T ss_pred CccccCccCCEEeecCCC
Confidence 7543 368999997653
No 108
>PRK09186 flagellin modification protein A; Provisional
Probab=79.89 E-value=8.7 Score=33.74 Aligned_cols=129 Identities=10% Similarity=0.019 Sum_probs=65.5
Q ss_pred chhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh----------
Q 042656 16 SLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS---------- 82 (289)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e---------- 82 (289)
...+.+|..+....++.+. ...|.++...++. ..|.. ....+..|+.+.. .+. .|.+.+...+
T Consensus 111 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS-~~~~~-~~~~~~~~~~~~~-~~~-~Y~~sK~a~~~l~~~la~e~ 186 (256)
T PRK09186 111 NENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISS-IYGVV-APKFEIYEGTSMT-SPV-EYAAIKAGIIHLTKYLAKYF 186 (256)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEec-hhhhc-cccchhccccccC-Ccc-hhHHHHHHHHHHHHHHHHHh
Confidence 4456677777776666543 2345555554331 11210 0011222333221 112 2554443222
Q ss_pred cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHH
Q 042656 83 YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWA 162 (289)
Q Consensus 83 ~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~a 162 (289)
...++.+++++|+.+++..+.. +.. ..+. .. +. ..+...+.+|++++++
T Consensus 187 ~~~~i~v~~i~Pg~~~~~~~~~---~~~-------~~~~-~~--~~------------------~~~~~~~dva~~~~~l 235 (256)
T PRK09186 187 KDSNIRVNCVSPGGILDNQPEA---FLN-------AYKK-CC--NG------------------KGMLDPDDICGTLVFL 235 (256)
T ss_pred CcCCeEEEEEecccccCCCCHH---HHH-------HHHh-cC--Cc------------------cCCCCHHHhhhhHhhe
Confidence 3468999999999887653211 110 0011 11 11 1145567799999999
Q ss_pred hcCCC--cCCCeeEecCCC
Q 042656 163 ATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 163 a~~p~--a~ge~FNi~dg~ 179 (289)
+..+. ..|+.+++.+|.
T Consensus 236 ~~~~~~~~~g~~~~~~~g~ 254 (256)
T PRK09186 236 LSDQSKYITGQNIIVDDGF 254 (256)
T ss_pred eccccccccCceEEecCCc
Confidence 87553 347888877763
No 109
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=78.76 E-value=15 Score=32.33 Aligned_cols=127 Identities=9% Similarity=-0.031 Sum_probs=69.1
Q ss_pred hhhccChHHHHHhhhhHhh---hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh----------c
Q 042656 17 LTVGASSRSLHNSLLPLAV---HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS----------Y 83 (289)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~l---~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e----------~ 83 (289)
..+.+|+.+....++.+.- ..+.++...++. ..+ ..|. ++...|...+...+ .
T Consensus 113 ~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss-~~~-----~~~~--------~~~~~y~~sK~a~~~~~~~~a~e~~ 178 (255)
T PRK07523 113 RLLRTNISSVFYVGQAVARHMIARGAGKIINIAS-VQS-----ALAR--------PGIAPYTATKGAVGNLTKGMATDWA 178 (255)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEcc-chh-----ccCC--------CCCccHHHHHHHHHHHHHHHHHHhh
Confidence 4456899998888887542 234444444221 000 1111 12334665443322 3
Q ss_pred CCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHh
Q 042656 84 SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAA 163 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa 163 (289)
..++.++++||+.+.++......... .+...+ ....|+. .+...+.+|+++++++
T Consensus 179 ~~gi~v~~i~pg~~~t~~~~~~~~~~---~~~~~~--~~~~~~~--------------------~~~~~~dva~~~~~l~ 233 (255)
T PRK07523 179 KHGLQCNAIAPGYFDTPLNAALVADP---EFSAWL--EKRTPAG--------------------RWGKVEELVGACVFLA 233 (255)
T ss_pred HhCeEEEEEEECcccCchhhhhccCH---HHHHHH--HhcCCCC--------------------CCcCHHHHHHHHHHHc
Confidence 46899999999999887421111100 001111 1122221 2345677999999888
Q ss_pred cCCCc--CCCeeEecCCCccC
Q 042656 164 TTDRA--KNQAFNCTNGDVFT 182 (289)
Q Consensus 164 ~~p~a--~ge~FNi~dg~~~s 182 (289)
..+.. .|+.+++..|..+|
T Consensus 234 ~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 234 SDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred CchhcCccCcEEEECCCeecc
Confidence 65433 58999998887654
No 110
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=77.33 E-value=9.1 Score=33.28 Aligned_cols=67 Identities=9% Similarity=0.239 Sum_probs=42.3
Q ss_pred CCCceEEEeccCceeecCCC--chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHH
Q 042656 84 SPAVTYSVHRSSIIIGASSR--SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIW 161 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~g--n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~ 161 (289)
..++.++++||+.|||+... ........ + ..+.|+.. . .+.+.+|+++++
T Consensus 176 ~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~------~--~~~~~~~~--------~------------~~~~dva~~~~~ 227 (247)
T PRK09730 176 AQGIRVNCVRPGFIYTEMHASGGEPGRVDR------V--KSNIPMQR--------G------------GQPEEVAQAIVW 227 (247)
T ss_pred HhCeEEEEEEeCCCcCcccccCCCHHHHHH------H--HhcCCCCC--------C------------cCHHHHHHHHHh
Confidence 46899999999999998531 22221111 1 12334333 1 245779999999
Q ss_pred HhcCCC--cCCCeeEecCC
Q 042656 162 AATTDR--AKNQAFNCTNG 178 (289)
Q Consensus 162 aa~~p~--a~ge~FNi~dg 178 (289)
++..+. ..|+.++|..|
T Consensus 228 ~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 228 LLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred hcChhhcCccCcEEecCCC
Confidence 887553 45788888765
No 111
>PRK07060 short chain dehydrogenase; Provisional
Probab=74.26 E-value=8.1 Score=33.63 Aligned_cols=70 Identities=3% Similarity=0.074 Sum_probs=43.3
Q ss_pred CCCceEEEeccCceeecCCCc-hhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHH
Q 042656 84 SPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWA 162 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~gn-~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~a 162 (289)
..++..+.+||+.|+++.... +..... ...+ . ... | ...+.+.+.+|++++.+
T Consensus 170 ~~~i~v~~v~pg~v~~~~~~~~~~~~~~----~~~~---~---~~~--------~--------~~~~~~~~d~a~~~~~l 223 (245)
T PRK07060 170 PHGIRVNSVNPTVTLTPMAAEAWSDPQK----SGPM---L---AAI--------P--------LGRFAEVDDVAAPILFL 223 (245)
T ss_pred hhCeEEEEEeeCCCCCchhhhhccCHHH----HHHH---H---hcC--------C--------CCCCCCHHHHHHHHHHH
Confidence 358999999999999875321 111100 0000 0 011 2 12356778899999998
Q ss_pred hcCCCc--CCCeeEecCCC
Q 042656 163 ATTDRA--KNQAFNCTNGD 179 (289)
Q Consensus 163 a~~p~a--~ge~FNi~dg~ 179 (289)
+..+.. .||.+++.+|-
T Consensus 224 ~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK07060 224 LSDAASMVSGVSLPVDGGY 242 (245)
T ss_pred cCcccCCccCcEEeECCCc
Confidence 877643 48999997764
No 112
>PRK06128 oxidoreductase; Provisional
Probab=72.08 E-value=26 Score=31.98 Aligned_cols=129 Identities=9% Similarity=0.047 Sum_probs=70.1
Q ss_pred cccCCchhhccChHHHHHhhhhHhh--hccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-----
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAV--HTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS----- 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l--~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e----- 82 (289)
+.++....+.+|+.++...++.+.- ..| ++...++ ...+ .|. + ...-|...|...+
T Consensus 155 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~~~~-------~~~----~----~~~~Y~asK~a~~~~~~~ 218 (300)
T PRK06128 155 TTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSIQSY-------QPS----P----TLLDYASTKAAIVAFTKA 218 (300)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCcccc-------CCC----C----CchhHHHHHHHHHHHHHH
Confidence 3455667888999999999988542 222 2333312 1111 110 0 1122554433222
Q ss_pred -----cCCCceEEEeccCceeecCCCc-hhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHH
Q 042656 83 -----YSPAVTYSVHRSSIIIGASSRS-LNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLA 156 (289)
Q Consensus 83 -----~~~g~~~~ivRP~~V~G~~~gn-~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la 156 (289)
...++..++++|+.|.++-..+ .+.- ..+.. + ....|+.- +...+.+|
T Consensus 219 la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~-~~~~~---~--~~~~p~~r--------------------~~~p~dva 272 (300)
T PRK06128 219 LAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPP-EKIPD---F--GSETPMKR--------------------PGQPVEMA 272 (300)
T ss_pred HHHHhhhcCcEEEEEEECcCcCCCcccCCCCH-HHHHH---H--hcCCCCCC--------------------CcCHHHHH
Confidence 3468999999999999884311 1110 00000 0 01223222 33456699
Q ss_pred HHHHHHhcCCC--cCCCeeEecCCCcc
Q 042656 157 EQQIWAATTDR--AKNQAFNCTNGDVF 181 (289)
Q Consensus 157 ~~~i~aa~~p~--a~ge~FNi~dg~~~ 181 (289)
+++++.+.... ..||.|+|..|..+
T Consensus 273 ~~~~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 273 PLYVLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred HHHHHHhCccccCccCcEEeeCCCEeC
Confidence 99888876543 25899999988654
No 113
>PRK06523 short chain dehydrogenase; Provisional
Probab=71.97 E-value=34 Score=30.11 Aligned_cols=32 Identities=19% Similarity=0.222 Sum_probs=24.2
Q ss_pred chHHHHHHHHHHhcCCC--cCCCeeEecCCCccC
Q 042656 151 DSRVLAEQQIWAATTDR--AKNQAFNCTNGDVFT 182 (289)
Q Consensus 151 ~~~~la~~~i~aa~~p~--a~ge~FNi~dg~~~s 182 (289)
..+.+|+++.+++.++. ..|+.+.|..|...|
T Consensus 226 ~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 226 EPEEVAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred CHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence 45779999999887543 358999998887654
No 114
>PRK06500 short chain dehydrogenase; Provisional
Probab=71.84 E-value=26 Score=30.50 Aligned_cols=130 Identities=12% Similarity=0.045 Sum_probs=68.0
Q ss_pred ccccCCchhhccChHHHHHhhhhHhh--hccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHH-----HHHHH
Q 042656 10 GPISDPSLTVGASSRSLHNSLLPLAV--HTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAV-----EDIAA 81 (289)
Q Consensus 10 ~~~~~p~~~~~~~~~~~~~~l~~~~l--~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~q-----Ed~L~ 81 (289)
.+.+++...+.+|+.++...++.+.- ..+.+.....+ ... .|. + ....|.. |.+.+
T Consensus 99 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~--------~~~-------~-~~~~Y~~sK~a~~~~~~ 162 (249)
T PRK06500 99 WDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH--------IGM-------P-NSSVYAASKAALLSLAK 162 (249)
T ss_pred CCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc--------cCC-------C-CccHHHHHHHHHHHHHH
Confidence 34566677899999999999988652 22322222211 111 111 0 1223554 33332
Q ss_pred h-----cCCCceEEEeccCceeecCCCch-hh-hHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHH
Q 042656 82 S-----YSPAVTYSVHRSSIIIGASSRSL-NN-SLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRV 154 (289)
Q Consensus 82 e-----~~~g~~~~ivRP~~V~G~~~gn~-~n-l~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~ 154 (289)
. ...++..+++||+.++++..... +. ..... +...+ ..+.|+.. +.+.+.
T Consensus 163 ~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~--------------------~~~~~~ 219 (249)
T PRK06500 163 TLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDA-VAAQI--QALVPLGR--------------------FGTPEE 219 (249)
T ss_pred HHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHH-HHHHH--HhcCCCCC--------------------CcCHHH
Confidence 2 34689999999999998732110 00 00000 00000 12333322 235677
Q ss_pred HHHHHHHHhcCCCc--CCCeeEecCC
Q 042656 155 LAEQQIWAATTDRA--KNQAFNCTNG 178 (289)
Q Consensus 155 la~~~i~aa~~p~a--~ge~FNi~dg 178 (289)
+|+++.+.+..+.. .|+.+.|..|
T Consensus 220 va~~~~~l~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 220 IAKAVLYLASDESAFIVGSEIIVDGG 245 (249)
T ss_pred HHHHHHHHcCccccCccCCeEEECCC
Confidence 99999998865432 4677777665
No 115
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=71.12 E-value=20 Score=31.17 Aligned_cols=69 Identities=9% Similarity=0.141 Sum_probs=43.2
Q ss_pred CCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHh
Q 042656 84 SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAA 163 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa 163 (289)
..+...+.++|+.|.++.......... ... ..+.|++. +...+.+|+++.+++
T Consensus 183 ~~~i~v~~v~pg~v~t~~~~~~~~~~~------~~~-~~~~~~~~--------------------~~~~~~~a~~~~~l~ 235 (253)
T PRK08217 183 RYGIRVAAIAPGVIETEMTAAMKPEAL------ERL-EKMIPVGR--------------------LGEPEEIAHTVRFII 235 (253)
T ss_pred HcCcEEEEEeeCCCcCccccccCHHHH------HHH-HhcCCcCC--------------------CcCHHHHHHHHHHHH
Confidence 468999999999998774322211110 000 02233222 234567999999988
Q ss_pred cCCCcCCCeeEecCCC
Q 042656 164 TTDRAKNQAFNCTNGD 179 (289)
Q Consensus 164 ~~p~a~ge~FNi~dg~ 179 (289)
.+....|+.||+.+|-
T Consensus 236 ~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 236 ENDYVTGRVLEIDGGL 251 (253)
T ss_pred cCCCcCCcEEEeCCCc
Confidence 7654578999999874
No 116
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=69.88 E-value=23 Score=31.21 Aligned_cols=29 Identities=10% Similarity=0.176 Sum_probs=22.0
Q ss_pred chHHHHHHHHHHhcCCC--cCCCeeEecCCC
Q 042656 151 DSRVLAEQQIWAATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 151 ~~~~la~~~i~aa~~p~--a~ge~FNi~dg~ 179 (289)
+.+.+|+++++.+.... ..|+.+||..|+
T Consensus 228 ~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 228 TIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred CHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 35779999998886543 358999998775
No 117
>PRK12746 short chain dehydrogenase; Provisional
Probab=69.16 E-value=11 Score=33.20 Aligned_cols=70 Identities=11% Similarity=0.149 Sum_probs=41.9
Q ss_pred CCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHh
Q 042656 84 SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAA 163 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa 163 (289)
..+..+++++|+.|+++-...++.--. + ..+- ... . .....++++.+|+++.+++
T Consensus 180 ~~~i~v~~v~pg~~~t~~~~~~~~~~~-~---~~~~-~~~--~------------------~~~~~~~~~dva~~~~~l~ 234 (254)
T PRK12746 180 ERGITVNTIMPGYTKTDINAKLLDDPE-I---RNFA-TNS--S------------------VFGRIGQVEDIADAVAFLA 234 (254)
T ss_pred hcCcEEEEEEECCccCcchhhhccChh-H---HHHH-Hhc--C------------------CcCCCCCHHHHHHHHHHHc
Confidence 468999999999998874322111000 0 0000 001 0 1223556888999998888
Q ss_pred cCCCc--CCCeeEecCC
Q 042656 164 TTDRA--KNQAFNCTNG 178 (289)
Q Consensus 164 ~~p~a--~ge~FNi~dg 178 (289)
..+.. .|+.|||..|
T Consensus 235 ~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 235 SSDSRWVTGQIIDVSGG 251 (254)
T ss_pred CcccCCcCCCEEEeCCC
Confidence 76543 5899999765
No 118
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=68.17 E-value=18 Score=31.22 Aligned_cols=30 Identities=13% Similarity=0.202 Sum_probs=22.5
Q ss_pred cchHHHHHHHHHHhcC--CCcCCCeeEecCCC
Q 042656 150 SDSRVLAEQQIWAATT--DRAKNQAFNCTNGD 179 (289)
Q Consensus 150 ~~~~~la~~~i~aa~~--p~a~ge~FNi~dg~ 179 (289)
.+.+.+|+++.+++.. +...||.|||.+|.
T Consensus 214 ~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 214 GQPEEIASAVAFLASDEAAYITGQTLHVNGGM 245 (248)
T ss_pred cCHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence 4667899998887765 33468999998764
No 119
>PRK06138 short chain dehydrogenase; Provisional
Probab=67.69 E-value=37 Score=29.51 Aligned_cols=31 Identities=10% Similarity=0.244 Sum_probs=23.2
Q ss_pred ccchHHHHHHHHHHhcCCCc--CCCeeEecCCC
Q 042656 149 MSDSRVLAEQQIWAATTDRA--KNQAFNCTNGD 179 (289)
Q Consensus 149 ~~~~~~la~~~i~aa~~p~a--~ge~FNi~dg~ 179 (289)
+.+.+.+|+++++++..+.. .|+.+.+..|.
T Consensus 217 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~ 249 (252)
T PRK06138 217 FGTAEEVAQAALFLASDESSFATGTTLVVDGGW 249 (252)
T ss_pred CcCHHHHHHHHHHHcCchhcCccCCEEEECCCe
Confidence 45567799999999977643 47888887653
No 120
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=67.43 E-value=23 Score=31.03 Aligned_cols=72 Identities=15% Similarity=0.129 Sum_probs=42.5
Q ss_pred CCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHh
Q 042656 84 SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAA 163 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa 163 (289)
..++.++++||+.|.++............ + .....|+ .++...+.+|+++.+++
T Consensus 180 ~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-----~-~~~~~~~--------------------~~~~~~~d~a~~i~~l~ 233 (256)
T PRK12745 180 EEGIGVYEVRPGLIKTDMTAPVTAKYDAL-----I-AKGLVPM--------------------PRWGEPEDVARAVAALA 233 (256)
T ss_pred HhCCEEEEEecCCCcCccccccchhHHhh-----h-hhcCCCc--------------------CCCcCHHHHHHHHHHHh
Confidence 46899999999999887432221111100 0 0111121 12345677999888877
Q ss_pred cCCC--cCCCeeEecCCCcc
Q 042656 164 TTDR--AKNQAFNCTNGDVF 181 (289)
Q Consensus 164 ~~p~--a~ge~FNi~dg~~~ 181 (289)
.... ..|+.|||.+|...
T Consensus 234 ~~~~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 234 SGDLPYSTGQAIHVDGGLSI 253 (256)
T ss_pred CCcccccCCCEEEECCCeec
Confidence 5432 35899999887643
No 121
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=65.69 E-value=16 Score=32.15 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=27.5
Q ss_pred ccccccchHHHHHHHHHHhcCCC--cCCCeeEecCCCc
Q 042656 145 HFCDMSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 180 (289)
Q Consensus 145 ~~~~~~~~~~la~~~i~aa~~p~--a~ge~FNi~dg~~ 180 (289)
.+..+.+.+.+++++.+.+.+.. ..|+.|||..|..
T Consensus 220 ~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 220 PLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred cccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence 34556778889999998876543 3589999998864
No 122
>PRK07890 short chain dehydrogenase; Provisional
Probab=65.38 E-value=12 Score=32.93 Aligned_cols=138 Identities=7% Similarity=0.005 Sum_probs=69.5
Q ss_pred cccCCchhhccChHHHHHhhhhHhh---hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHH-----HHHh
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAV---HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVED-----IAAS 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l---~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd-----~L~e 82 (289)
+.++....+.+|+.+....++.+.- .++ ++....+.. .+ ..|. | +..-|...+ +.+.
T Consensus 103 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~-~~-----~~~~----~----~~~~Y~~sK~a~~~l~~~ 167 (258)
T PRK07890 103 DFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSM-VL-----RHSQ----P----KYGAYKMAKGALLAASQS 167 (258)
T ss_pred CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEech-hh-----ccCC----C----CcchhHHHHHHHHHHHHH
Confidence 3455567788999999998888542 122 344432210 00 1111 1 111144333 2222
Q ss_pred -----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHH
Q 042656 83 -----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAE 157 (289)
Q Consensus 83 -----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~ 157 (289)
...++..+++||+.|+|+...+.+.. ..+..+.+.+- . .+..........+.+.+.+|+
T Consensus 168 ~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~---------~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~dva~ 231 (258)
T PRK07890 168 LATELGPQGIRVNSVAPGYIWGDPLKGYFRH---------QAGKYGVTVEQ--I-----YAETAANSDLKRLPTDDEVAS 231 (258)
T ss_pred HHHHHhhcCcEEEEEeCCccCcHHHHHHhhh---------cccccCCCHHH--H-----HHHHhhcCCccccCCHHHHHH
Confidence 24589999999999999853222111 00011111000 0 000000012334567788999
Q ss_pred HHHHHhcCCC--cCCCeeEecCCC
Q 042656 158 QQIWAATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 158 ~~i~aa~~p~--a~ge~FNi~dg~ 179 (289)
++++++.... ..||.+.+..|.
T Consensus 232 a~~~l~~~~~~~~~G~~i~~~gg~ 255 (258)
T PRK07890 232 AVLFLASDLARAITGQTLDVNCGE 255 (258)
T ss_pred HHHHHcCHhhhCccCcEEEeCCcc
Confidence 9999887532 357877666554
No 123
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=63.35 E-value=24 Score=30.52 Aligned_cols=30 Identities=17% Similarity=0.263 Sum_probs=23.1
Q ss_pred cchHHHHHHHHHHhcCCCc--CCCeeEecCCC
Q 042656 150 SDSRVLAEQQIWAATTDRA--KNQAFNCTNGD 179 (289)
Q Consensus 150 ~~~~~la~~~i~aa~~p~a--~ge~FNi~dg~ 179 (289)
...+.+++++++.+.++.. .|+.|++.+|.
T Consensus 211 ~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 211 GTGAEVASAVAYLASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred cCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence 3467799999988866543 58999998874
No 124
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=58.67 E-value=97 Score=26.76 Aligned_cols=31 Identities=10% Similarity=0.273 Sum_probs=23.2
Q ss_pred ccchHHHHHHHHHHhcCCCc--CCCeeEecCCC
Q 042656 149 MSDSRVLAEQQIWAATTDRA--KNQAFNCTNGD 179 (289)
Q Consensus 149 ~~~~~~la~~~i~aa~~p~a--~ge~FNi~dg~ 179 (289)
+...+.+|+++++++..+.+ .|+.+.+..|.
T Consensus 216 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 248 (251)
T PRK07231 216 LGTPEDIANAALFLASDEASWITGVTLVVDGGR 248 (251)
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCeEEECCCc
Confidence 45778899999999976543 47888886554
No 125
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=58.38 E-value=32 Score=29.96 Aligned_cols=135 Identities=11% Similarity=0.008 Sum_probs=69.0
Q ss_pred cccCCchhhccChHHHHHhhhhHhh---hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHH-----HHHHHh
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAV---HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAV-----EDIAAS 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l---~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~q-----Ed~L~e 82 (289)
+.+++...+.+|..+....++.+.- ..+.++...++.. + ...|.. +...|.. +.+...
T Consensus 96 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~--~----~~~~~~--------~~~~Y~~sK~a~~~~~~~ 161 (252)
T PRK08220 96 SDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSN--A----AHVPRI--------GMAAYGASKAALTSLAKC 161 (252)
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCc--h----hccCCC--------CCchhHHHHHHHHHHHHH
Confidence 4456677788999998888887531 2333344442210 0 011111 1222443 332222
Q ss_pred -----cCCCceEEEeccCceeecCCCchhhhH--HHHHHHHHH-HHHhCCCeEEEeccccCCCCCcccccccccccchHH
Q 042656 83 -----YSPAVTYSVHRSSIIIGASSRSLNNSL--LTLAVYATI-CRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRV 154 (289)
Q Consensus 83 -----~~~g~~~~ivRP~~V~G~~~gn~~nl~--~~l~vyaal-~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~ 154 (289)
...+..+++++|+.|+++.....+... ....+.... +...+. ....+...+.
T Consensus 162 la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~d 221 (252)
T PRK08220 162 VGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGI--------------------PLGKIARPQE 221 (252)
T ss_pred HHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcC--------------------CCcccCCHHH
Confidence 236899999999999988532111000 000000000 000111 1234567788
Q ss_pred HHHHHHHHhcCCC--cCCCeeEecCCC
Q 042656 155 LAEQQIWAATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 155 la~~~i~aa~~p~--a~ge~FNi~dg~ 179 (289)
+|++.++++.... ..||.+-+..|.
T Consensus 222 va~~~~~l~~~~~~~~~g~~i~~~gg~ 248 (252)
T PRK08220 222 IANAVLFLASDLASHITLQDIVVDGGA 248 (252)
T ss_pred HHHHHHHHhcchhcCccCcEEEECCCe
Confidence 9999999886542 357777666654
No 126
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=58.20 E-value=56 Score=32.22 Aligned_cols=142 Identities=8% Similarity=-0.027 Sum_probs=76.9
Q ss_pred ccChHHHHHhhhhHhhhccCceeecccccccCccCCCCCCCCCCCCCCCCCC-Ch----HHHHHHHHhcCCCceEEEecc
Q 042656 20 GASSRSLHNSLLPLAVHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPN-FY----YAVEDIAASYSPAVTYSVHRS 94 (289)
Q Consensus 20 ~~~~~~~~~~l~~~~l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~-fy----y~qEd~L~e~~~g~~~~ivRP 94 (289)
.+.-.++.|.++. +...|+|++..++ .+|. ..+..+.-... - + .+ +-.|+++. ..|+.++||||
T Consensus 175 ~VD~~g~knlvdA-~~~aGvk~~vlv~--si~~----~~~~~~~~~~~-~-~~~~~~~k~~~e~~~~--~Sgl~ytiIR~ 243 (411)
T KOG1203|consen 175 KVDYEGTKNLVDA-CKKAGVKRVVLVG--SIGG----TKFNQPPNILL-L-NGLVLKAKLKAEKFLQ--DSGLPYTIIRP 243 (411)
T ss_pred eecHHHHHHHHHH-HHHhCCceEEEEE--eecC----cccCCCchhhh-h-hhhhhHHHHhHHHHHH--hcCCCcEEEec
Confidence 4678899999999 7899999998743 2332 11111111000 0 1 11 22355554 47999999999
Q ss_pred CceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcCCCcCC-Cee
Q 042656 95 SIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATTDRAKN-QAF 173 (289)
Q Consensus 95 ~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~p~a~g-e~F 173 (289)
+.-.=...+.....+ ...+.-+ -++...+ .+.-..+|++++.++.++.+.+ .+.
T Consensus 244 g~~~~~~~~~~~~~~------------~~~~~~~--------~~~~~~~-----~i~r~~vael~~~all~~~~~~~k~~ 298 (411)
T KOG1203|consen 244 GGLEQDTGGQREVVV------------DDEKELL--------TVDGGAY-----SISRLDVAELVAKALLNEAATFKKVV 298 (411)
T ss_pred cccccCCCCcceecc------------cCccccc--------cccccce-----eeehhhHHHHHHHHHhhhhhccceeE
Confidence 875443332222111 2333333 3443322 1222347888888888887766 344
Q ss_pred Eec--CCCccCHHHHHHHHHHHhCCC
Q 042656 174 NCT--NGDVFTWKSLWKLLSEIFDVE 197 (289)
Q Consensus 174 Ni~--dg~~~s~~~lw~~la~~~G~~ 197 (289)
+++ ++.+-++-+.|..+....+..
T Consensus 299 ~~v~~~~gpg~~~~~l~~~~~~~~~~ 324 (411)
T KOG1203|consen 299 ELVLKPEGPGRPYKVLLELFPLDESS 324 (411)
T ss_pred EeecCCCCCCccHHHHHhhccccccc
Confidence 444 334666666665554444443
No 127
>PRK07041 short chain dehydrogenase; Provisional
Probab=56.46 E-value=73 Score=27.30 Aligned_cols=30 Identities=10% Similarity=0.157 Sum_probs=24.2
Q ss_pred chHHHHHHHHHHhcCCCcCCCeeEecCCCc
Q 042656 151 DSRVLAEQQIWAATTDRAKNQAFNCTNGDV 180 (289)
Q Consensus 151 ~~~~la~~~i~aa~~p~a~ge~FNi~dg~~ 180 (289)
..+++|+++.+++..+...|+.|+|..|..
T Consensus 199 ~~~dva~~~~~l~~~~~~~G~~~~v~gg~~ 228 (230)
T PRK07041 199 QPEDVANAILFLAANGFTTGSTVLVDGGHA 228 (230)
T ss_pred CHHHHHHHHHHHhcCCCcCCcEEEeCCCee
Confidence 347799999998887656689999998864
No 128
>PRK12939 short chain dehydrogenase; Provisional
Probab=53.84 E-value=53 Score=28.42 Aligned_cols=32 Identities=13% Similarity=0.140 Sum_probs=24.9
Q ss_pred ccchHHHHHHHHHHhcCCC--cCCCeeEecCCCc
Q 042656 149 MSDSRVLAEQQIWAATTDR--AKNQAFNCTNGDV 180 (289)
Q Consensus 149 ~~~~~~la~~~i~aa~~p~--a~ge~FNi~dg~~ 180 (289)
+.+.+.+|+++++++..+. ..||.+++..|..
T Consensus 215 ~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~ 248 (250)
T PRK12939 215 LQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGFV 248 (250)
T ss_pred CCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence 4567889999999997654 3689998887753
No 129
>PRK06180 short chain dehydrogenase; Provisional
Probab=53.55 E-value=45 Score=29.90 Aligned_cols=70 Identities=6% Similarity=-0.142 Sum_probs=39.0
Q ss_pred hhhccChHHHHHhhhhHhh---hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh----------c
Q 042656 17 LTVGASSRSLHNSLLPLAV---HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS----------Y 83 (289)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~l---~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e----------~ 83 (289)
..+.+|+.++.+.++.+.- ..+.++...++. .-+ ..+ .| +...|...+...+ .
T Consensus 104 ~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS-~~~-----~~~----~~----~~~~Y~~sK~a~~~~~~~la~e~~ 169 (277)
T PRK06180 104 RQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITS-MGG-----LIT----MP----GIGYYCGSKFALEGISESLAKEVA 169 (277)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEec-ccc-----cCC----CC----CcchhHHHHHHHHHHHHHHHHHhh
Confidence 4478999999888887532 234444444231 001 111 11 2223554433222 2
Q ss_pred CCCceEEEeccCceeec
Q 042656 84 SPAVTYSVHRSSIIIGA 100 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~ 100 (289)
..+..++++||+.|.++
T Consensus 170 ~~gi~v~~i~Pg~v~t~ 186 (277)
T PRK06180 170 PFGIHVTAVEPGSFRTD 186 (277)
T ss_pred hhCcEEEEEecCCcccC
Confidence 35899999999999875
No 130
>PRK06701 short chain dehydrogenase; Provisional
Probab=52.66 E-value=1e+02 Score=28.03 Aligned_cols=122 Identities=11% Similarity=0.069 Sum_probs=66.4
Q ss_pred chhhccChHHHHHhhhhHhhh--ccCceeeccc-ccccCccCCCCCCCCCCCCCCCCCCChHHHHHHH-----Hh-----
Q 042656 16 SLTVGASSRSLHNSLLPLAVH--TNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIA-----AS----- 82 (289)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~l~--tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L-----~e----- 82 (289)
...+..|+.+....++.+.-. .+ .+...++ ...+ .+ .+. ...|...+.. ..
T Consensus 150 ~~~~~~N~~~~~~l~~a~~~~~~~~-g~iV~isS~~~~-------~~----~~~----~~~Y~~sK~a~~~l~~~la~~~ 213 (290)
T PRK06701 150 DKTFKTNIYSYFHMTKAALPHLKQG-SAIINTGSITGY-------EG----NET----LIDYSATKGAIHAFTRSLAQSL 213 (290)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHhhC-CeEEEEeccccc-------CC----CCC----cchhHHHHHHHHHHHHHHHHHh
Confidence 567899999999999886421 22 2333322 1111 01 111 1124443222 22
Q ss_pred cCCCceEEEeccCceeecCCC-chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHH
Q 042656 83 YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIW 161 (289)
Q Consensus 83 ~~~g~~~~ivRP~~V~G~~~g-n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~ 161 (289)
...++..++|||+.|+.+... +..... +..+ .... ....+...+.+|+++++
T Consensus 214 ~~~gIrv~~i~pG~v~T~~~~~~~~~~~--~~~~-----~~~~--------------------~~~~~~~~~dva~~~~~ 266 (290)
T PRK06701 214 VQKGIRVNAVAPGPIWTPLIPSDFDEEK--VSQF-----GSNT--------------------PMQRPGQPEELAPAYVF 266 (290)
T ss_pred hhcCeEEEEEecCCCCCcccccccCHHH--HHHH-----HhcC--------------------CcCCCcCHHHHHHHHHH
Confidence 245899999999999887432 111110 0000 0111 12235566779999998
Q ss_pred HhcCCC--cCCCeeEecCCCc
Q 042656 162 AATTDR--AKNQAFNCTNGDV 180 (289)
Q Consensus 162 aa~~p~--a~ge~FNi~dg~~ 180 (289)
.+.... ..|+.|+|.+|..
T Consensus 267 ll~~~~~~~~G~~i~idgg~~ 287 (290)
T PRK06701 267 LASPDSSYITGQMLHVNGGVI 287 (290)
T ss_pred HcCcccCCccCcEEEeCCCcc
Confidence 887543 3689999987753
No 131
>PRK05876 short chain dehydrogenase; Provisional
Probab=52.62 E-value=44 Score=30.16 Aligned_cols=143 Identities=10% Similarity=-0.036 Sum_probs=72.3
Q ss_pred hhhccChHHHHHhhhhHh---hhcc-CceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHH---------HHh-
Q 042656 17 LTVGASSRSLHNSLLPLA---VHTN-ICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDI---------AAS- 82 (289)
Q Consensus 17 ~~~~~~~~~~~~~l~~~~---l~tG-~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~---------L~e- 82 (289)
..+.+|+.+....++.+. ...| .++...++. ..| ..|. ++..-|...+. ..|
T Consensus 109 ~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS-~~~-----~~~~--------~~~~~Y~asK~a~~~~~~~l~~e~ 174 (275)
T PRK05876 109 WVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS-FAG-----LVPN--------AGLGAYGVAKYGVVGLAETLAREV 174 (275)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC-hhh-----ccCC--------CCCchHHHHHHHHHHHHHHHHHHh
Confidence 456889999988887753 2343 233333221 111 1111 12233665443 222
Q ss_pred cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHH
Q 042656 83 YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWA 162 (289)
Q Consensus 83 ~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~a 162 (289)
...+..+++++|+.|.++-..+........ .....+... +|+.. ...++.+++.+|+.++.|
T Consensus 175 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-------~~~~~~~~~--------~~~~~---~~~~~~~~~dva~~~~~a 236 (275)
T PRK05876 175 TADGIGVSVLCPMVVETNLVANSERIRGAA-------CAQSSTTGS--------PGPLP---LQDDNLGVDDIAQLTADA 236 (275)
T ss_pred hhcCcEEEEEEeCccccccccchhhhcCcc-------ccccccccc--------ccccc---ccccCCCHHHHHHHHHHH
Confidence 356899999999998876432221110000 001111112 23221 456678999999999988
Q ss_pred hcCCCcCCCeeEecCCC-ccCHHHHHHHHHHHhC
Q 042656 163 ATTDRAKNQAFNCTNGD-VFTWKSLWKLLSEIFD 195 (289)
Q Consensus 163 a~~p~a~ge~FNi~dg~-~~s~~~lw~~la~~~G 195 (289)
+.+ |+.+.+.+.. ..++.+....+..+|.
T Consensus 237 i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (275)
T PRK05876 237 ILA----NRLYVLPHAASRASIRRRFERIDRTFD 266 (275)
T ss_pred HHc----CCeEEecChhhHHHHHHHHHHHHHhcc
Confidence 864 4566665322 2334444444444443
No 132
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=52.39 E-value=1.4e+02 Score=26.04 Aligned_cols=126 Identities=11% Similarity=0.108 Sum_probs=64.8
Q ss_pred chhhccChHHHHHhhhhHhhh----ccCceeecccc-cccCccCCCCCCCCCCCCCCCCCCChHHHHH-----HHHh---
Q 042656 16 SLTVGASSRSLHNSLLPLAVH----TNICKYQGLPF-RYFGQLIGHDPPFKEDSVRLPFPNFYYAVED-----IAAS--- 82 (289)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~l~----tG~k~yg~~~~-~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd-----~L~e--- 82 (289)
...+..|+.+..+.++.+.-. .+.++...++. ..+.. .. +..+ +..-|...+ +++.
T Consensus 114 ~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~----~~------~~~~-~~~~Y~~sKa~~~~~~~~~a~ 182 (259)
T PRK08213 114 DKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGG----NP------PEVM-DTIAYNTSKGAVINFTRALAA 182 (259)
T ss_pred HHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccC----CC------cccc-CcchHHHHHHHHHHHHHHHHH
Confidence 345678999999988875422 34445544331 11110 00 1101 112255433 3332
Q ss_pred --cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHH
Q 042656 83 --YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQI 160 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i 160 (289)
...+..+++++|+.+-.+......... . ..+ ..+.|+.- .|+ .+.+|++..
T Consensus 183 ~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~----~-~~~--~~~~~~~~--------~~~------------~~~va~~~~ 235 (259)
T PRK08213 183 EWGPHGIRVNAIAPGFFPTKMTRGTLERL----G-EDL--LAHTPLGR--------LGD------------DEDLKGAAL 235 (259)
T ss_pred HhcccCEEEEEEecCcCCCcchhhhhHHH----H-HHH--HhcCCCCC--------CcC------------HHHHHHHHH
Confidence 245899999999888665322221111 0 011 13444443 332 356888888
Q ss_pred HHhcCCC--cCCCeeEecCCC
Q 042656 161 WAATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 161 ~aa~~p~--a~ge~FNi~dg~ 179 (289)
+++.... ..|+.+++..|.
T Consensus 236 ~l~~~~~~~~~G~~~~~~~~~ 256 (259)
T PRK08213 236 LLASDASKHITGQILAVDGGV 256 (259)
T ss_pred HHhCccccCccCCEEEECCCe
Confidence 7775442 358888887664
No 133
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=51.45 E-value=95 Score=27.13 Aligned_cols=76 Identities=13% Similarity=0.116 Sum_probs=43.0
Q ss_pred ccCCchhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh------
Q 042656 12 ISDPSLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS------ 82 (289)
Q Consensus 12 ~~~p~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e------ 82 (289)
.++....+.+|+.++...++.+. ...+.++...++.. .+ ..|. .+...|...+...+
T Consensus 96 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~-~~-----~~~~--------~~~~~Y~~sK~~~~~~~~~l 161 (248)
T PRK10538 96 VEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGST-AG-----SWPY--------AGGNVYGATKAFVRQFSLNL 161 (248)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCc-cc-----CCCC--------CCCchhHHHHHHHHHHHHHH
Confidence 34445668889999777776643 24555555543310 00 1111 12334554333322
Q ss_pred ----cCCCceEEEeccCceeecC
Q 042656 83 ----YSPAVTYSVHRSSIIIGAS 101 (289)
Q Consensus 83 ----~~~g~~~~ivRP~~V~G~~ 101 (289)
...+..+++++|+.|.|..
T Consensus 162 ~~~~~~~~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 162 RTDLHGTAVRVTDIEPGLVGGTE 184 (248)
T ss_pred HHHhcCCCcEEEEEeCCeecccc
Confidence 3468999999999998764
No 134
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=49.67 E-value=1e+02 Score=26.42 Aligned_cols=128 Identities=9% Similarity=0.098 Sum_probs=67.5
Q ss_pred ccCCchhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHH-----HHh-
Q 042656 12 ISDPSLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDI-----AAS- 82 (289)
Q Consensus 12 ~~~p~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~-----L~e- 82 (289)
.++...++..|+.+....++.+. ...+.+++..++.. .+ ..| .| ....|...+. .+.
T Consensus 101 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~-~~-----~~~----~~----~~~~Y~~sK~a~~~~~~~l 166 (245)
T PRK12824 101 HQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSV-NG-----LKG----QF----GQTNYSAAKAGMIGFTKAL 166 (245)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECCh-hh-----ccC----CC----CChHHHHHHHHHHHHHHHH
Confidence 34455667788888888765532 23444555553311 01 011 11 1122555443 221
Q ss_pred ----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHH
Q 042656 83 ----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQ 158 (289)
Q Consensus 83 ----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~ 158 (289)
...+...++++|+.+.++......... .-.+. ...| + ......+.++++
T Consensus 167 ~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~-----~~~~~--~~~~--~------------------~~~~~~~~va~~ 219 (245)
T PRK12824 167 ASEGARYGITVNCIAPGYIATPMVEQMGPEV-----LQSIV--NQIP--M------------------KRLGTPEEIAAA 219 (245)
T ss_pred HHHHHHhCeEEEEEEEcccCCcchhhcCHHH-----HHHHH--hcCC--C------------------CCCCCHHHHHHH
Confidence 245799999999999876432111111 00110 1122 2 113345669999
Q ss_pred HHHHhcCCC--cCCCeeEecCCCc
Q 042656 159 QIWAATTDR--AKNQAFNCTNGDV 180 (289)
Q Consensus 159 ~i~aa~~p~--a~ge~FNi~dg~~ 180 (289)
+.+.+..+. ..||.+++.+|..
T Consensus 220 ~~~l~~~~~~~~~G~~~~~~~g~~ 243 (245)
T PRK12824 220 VAFLVSEAAGFITGETISINGGLY 243 (245)
T ss_pred HHHHcCccccCccCcEEEECCCee
Confidence 887775443 3689999998864
No 135
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=48.26 E-value=1.6e+02 Score=25.50 Aligned_cols=126 Identities=15% Similarity=0.202 Sum_probs=66.9
Q ss_pred ccCCchhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHH-----Hh-
Q 042656 12 ISDPSLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIA-----AS- 82 (289)
Q Consensus 12 ~~~p~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L-----~e- 82 (289)
..+....+.+|+.++...++.+. ...+.++...++. ..+ ..|. .+...|...+.. ..
T Consensus 102 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS-~~~-----~~~~--------~~~~~y~~sK~a~~~~~~~l 167 (246)
T PRK12938 102 REDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISS-VNG-----QKGQ--------FGQTNYSTAKAGIHGFTMSL 167 (246)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEec-hhc-----cCCC--------CCChhHHHHHHHHHHHHHHH
Confidence 34556677899999777776643 2345445544331 111 1110 112235543332 11
Q ss_pred ----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHH
Q 042656 83 ----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQ 158 (289)
Q Consensus 83 ----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~ 158 (289)
...+..++.++|+.+.++.......-. +..+ ....|+.. +.+.+.++++
T Consensus 168 ~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~-----~~~~--~~~~~~~~--------------------~~~~~~v~~~ 220 (246)
T PRK12938 168 AQEVATKGVTVNTVSPGYIGTDMVKAIRPDV-----LEKI--VATIPVRR--------------------LGSPDEIGSI 220 (246)
T ss_pred HHHhhhhCeEEEEEEecccCCchhhhcChHH-----HHHH--HhcCCccC--------------------CcCHHHHHHH
Confidence 346899999999999876422111100 1111 11223222 2345779999
Q ss_pred HHHHhcCCC--cCCCeeEecCC
Q 042656 159 QIWAATTDR--AKNQAFNCTNG 178 (289)
Q Consensus 159 ~i~aa~~p~--a~ge~FNi~dg 178 (289)
+.+.+..+. ..|+.+++..|
T Consensus 221 ~~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 221 VAWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred HHHHcCcccCCccCcEEEECCc
Confidence 888776542 46899998765
No 136
>PRK06841 short chain dehydrogenase; Provisional
Probab=45.84 E-value=1e+02 Score=26.87 Aligned_cols=124 Identities=9% Similarity=0.050 Sum_probs=66.7
Q ss_pred chhhccChHHHHHhhhhHhh---hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHH-----h-----
Q 042656 16 SLTVGASSRSLHNSLLPLAV---HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAA-----S----- 82 (289)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~l---~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~-----e----- 82 (289)
...+..|+.+....++.+.- ..+.++...++.. .+ ..|... ...|...+... .
T Consensus 114 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~-----~~~~~~--------~~~Y~~sK~a~~~~~~~la~e~ 179 (255)
T PRK06841 114 DKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQ-AG-----VVALER--------HVAYCASKAGVVGMTKVLALEW 179 (255)
T ss_pred HHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcch-hh-----ccCCCC--------CchHHHHHHHHHHHHHHHHHHH
Confidence 44678899998888877432 2344555542310 00 111111 12254433322 1
Q ss_pred cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHH
Q 042656 83 YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWA 162 (289)
Q Consensus 83 ~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~a 162 (289)
...++.++.++|+.|..+-....++-.. . . .+ ..+.| . ..+.+.+.+|++++++
T Consensus 180 ~~~gi~v~~v~pg~v~t~~~~~~~~~~~-~--~-~~--~~~~~--~------------------~~~~~~~~va~~~~~l 233 (255)
T PRK06841 180 GPYGITVNAISPTVVLTELGKKAWAGEK-G--E-RA--KKLIP--A------------------GRFAYPEEIAAAALFL 233 (255)
T ss_pred HhhCeEEEEEEeCcCcCcccccccchhH-H--H-HH--HhcCC--C------------------CCCcCHHHHHHHHHHH
Confidence 3468999999999987663222111100 0 0 00 11222 2 1245677899999998
Q ss_pred hcCCCc--CCCeeEecCCC
Q 042656 163 ATTDRA--KNQAFNCTNGD 179 (289)
Q Consensus 163 a~~p~a--~ge~FNi~dg~ 179 (289)
+..+.. .|+.+.+..|.
T Consensus 234 ~~~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 234 ASDAAAMITGENLVIDGGY 252 (255)
T ss_pred cCccccCccCCEEEECCCc
Confidence 876543 58888887664
No 137
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=45.11 E-value=1.3e+02 Score=26.68 Aligned_cols=80 Identities=10% Similarity=0.054 Sum_probs=49.1
Q ss_pred CCChHH----HHHHHHh--cCCCceEEEeccCceeecCCC-chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCccc
Q 042656 70 PNFYYA----VEDIAAS--YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYT 142 (289)
Q Consensus 70 p~fyy~----qEd~L~e--~~~g~~~~ivRP~~V~G~~~g-n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~ 142 (289)
|.-||. |-+.|.. ...++.||-+=|...|-|+.+ +-+.+ -|--|-+ --.+.|
T Consensus 124 P~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGerTg~yrl-------------ggD~ll~--------n~~G~S 182 (211)
T COG2910 124 PAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPGERTGNYRL-------------GGDQLLV--------NAKGES 182 (211)
T ss_pred chhHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCccccCceEe-------------ccceEEE--------cCCCce
Confidence 444655 3444444 345699999999999999763 22222 2445656 333333
Q ss_pred ccccccccchHHHHHHHHHHhcCCCcCCCeeEec
Q 042656 143 WEHFCDMSDSRVLAEQQIWAATTDRAKNQAFNCT 176 (289)
Q Consensus 143 ~~~~~~~~~~~~la~~~i~aa~~p~a~ge~FNi~ 176 (289)
+ ++..+-|-+++--++.|+-.+|-|-|.
T Consensus 183 r------IS~aDYAiA~lDe~E~~~h~rqRftv~ 210 (211)
T COG2910 183 R------ISYADYAIAVLDELEKPQHIRQRFTVA 210 (211)
T ss_pred e------eeHHHHHHHHHHHHhcccccceeeeec
Confidence 3 333446777777777887778888664
No 138
>PRK06181 short chain dehydrogenase; Provisional
Probab=43.01 E-value=1.1e+02 Score=26.78 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=39.6
Q ss_pred CCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHh
Q 042656 84 SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAA 163 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa 163 (289)
..+..++++||+.|...-.....+ ..+.+..- ++. ...++++.+.+|+++++++
T Consensus 170 ~~~i~~~~i~pg~v~t~~~~~~~~-------------~~~~~~~~--------~~~-----~~~~~~~~~dva~~i~~~~ 223 (263)
T PRK06181 170 DDGVAVTVVCPGFVATDIRKRALD-------------GDGKPLGK--------SPM-----QESKIMSAEECAEAILPAI 223 (263)
T ss_pred hcCceEEEEecCccccCcchhhcc-------------cccccccc--------ccc-----cccCCCCHHHHHHHHHHHh
Confidence 468999999998887653321110 12333222 221 2236788999999999999
Q ss_pred cCCCcCCCeeEecCC
Q 042656 164 TTDRAKNQAFNCTNG 178 (289)
Q Consensus 164 ~~p~a~ge~FNi~dg 178 (289)
+.. .++.++...|
T Consensus 224 ~~~--~~~~~~~~~~ 236 (263)
T PRK06181 224 ARR--KRLLVMSLRG 236 (263)
T ss_pred hCC--CCEEecCchH
Confidence 753 3455444333
No 139
>PLN02253 xanthoxin dehydrogenase
Probab=42.89 E-value=1.2e+02 Score=27.05 Aligned_cols=32 Identities=9% Similarity=0.072 Sum_probs=23.5
Q ss_pred cchHHHHHHHHHHhcCCCc--CCCeeEecCCCcc
Q 042656 150 SDSRVLAEQQIWAATTDRA--KNQAFNCTNGDVF 181 (289)
Q Consensus 150 ~~~~~la~~~i~aa~~p~a--~ge~FNi~dg~~~ 181 (289)
...+.+|+++++++..+.. .|+.++|..|..+
T Consensus 238 ~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~ 271 (280)
T PLN02253 238 LTVDDVANAVLFLASDEARYISGLNLMIDGGFTC 271 (280)
T ss_pred CCHHHHHHHHHhhcCcccccccCcEEEECCchhh
Confidence 4577899999998865432 5899999776543
No 140
>PRK06179 short chain dehydrogenase; Provisional
Probab=41.39 E-value=62 Score=28.65 Aligned_cols=77 Identities=9% Similarity=0.015 Sum_probs=43.7
Q ss_pred cccCCchhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHH-----HHHh
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVED-----IAAS 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd-----~L~e 82 (289)
+.++....+.+|+.+....++.+. ...|.++...++. ..|. .| .| ...-|...+ ++..
T Consensus 93 ~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS-~~~~-----~~----~~----~~~~Y~~sK~a~~~~~~~ 158 (270)
T PRK06179 93 SIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISS-VLGF-----LP----AP----YMALYAASKHAVEGYSES 158 (270)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECC-cccc-----CC----CC----CccHHHHHHHHHHHHHHH
Confidence 344556678889988888887742 3456566554331 1111 11 11 112244322 2222
Q ss_pred -----cCCCceEEEeccCceeecC
Q 042656 83 -----YSPAVTYSVHRSSIIIGAS 101 (289)
Q Consensus 83 -----~~~g~~~~ivRP~~V~G~~ 101 (289)
...++.++++||+.|.++-
T Consensus 159 l~~el~~~gi~v~~v~pg~~~t~~ 182 (270)
T PRK06179 159 LDHEVRQFGIRVSLVEPAYTKTNF 182 (270)
T ss_pred HHHHHhhhCcEEEEEeCCCccccc
Confidence 3569999999999998774
No 141
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=40.88 E-value=2e+02 Score=24.64 Aligned_cols=127 Identities=6% Similarity=-0.048 Sum_probs=66.0
Q ss_pred ccCCchhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHH-----HHHh-
Q 042656 12 ISDPSLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVED-----IAAS- 82 (289)
Q Consensus 12 ~~~p~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd-----~L~e- 82 (289)
.++....+.+|+.++.+.++.+. ...+.++...++. ..+ ..|. +. ..-|...+ +.+.
T Consensus 89 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS-~~~-----~~~~----~~----~~~Y~~sK~a~~~~~~~l 154 (235)
T PRK06550 89 LEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCS-IAS-----FVAG----GG----GAAYTASKHALAGFTKQL 154 (235)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC-hhh-----ccCC----CC----CcccHHHHHHHHHHHHHH
Confidence 34455678899999988888754 2333334433221 111 1111 10 11133222 2221
Q ss_pred ----cCCCceEEEeccCceeecCCC-chhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHH
Q 042656 83 ----YSPAVTYSVHRSSIIIGASSR-SLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAE 157 (289)
Q Consensus 83 ----~~~g~~~~ivRP~~V~G~~~g-n~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~ 157 (289)
...+...++++|+.|.++... .+-.-. +...+ ....| . ..+...+.+|+
T Consensus 155 a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~----~~~~~--~~~~~--~------------------~~~~~~~~~a~ 208 (235)
T PRK06550 155 ALDYAKDGIQVFGIAPGAVKTPMTAADFEPGG----LADWV--ARETP--I------------------KRWAEPEEVAE 208 (235)
T ss_pred HHHhhhcCeEEEEEeeCCccCcccccccCchH----HHHHH--hccCC--c------------------CCCCCHHHHHH
Confidence 346899999999999877432 111100 00001 01222 1 12455677999
Q ss_pred HHHHHhcCCC--cCCCeeEecCC
Q 042656 158 QQIWAATTDR--AKNQAFNCTNG 178 (289)
Q Consensus 158 ~~i~aa~~p~--a~ge~FNi~dg 178 (289)
++++++.++. ..|+.+.+..|
T Consensus 209 ~~~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 209 LTLFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred HHHHHcChhhccCCCcEEEECCc
Confidence 9999986543 35788877655
No 142
>PRK12937 short chain dehydrogenase; Provisional
Probab=40.02 E-value=1.3e+02 Score=25.86 Aligned_cols=28 Identities=18% Similarity=0.276 Sum_probs=21.0
Q ss_pred chHHHHHHHHHHhcCCC--cCCCeeEecCC
Q 042656 151 DSRVLAEQQIWAATTDR--AKNQAFNCTNG 178 (289)
Q Consensus 151 ~~~~la~~~i~aa~~p~--a~ge~FNi~dg 178 (289)
+.+.+|+++++.+.++. ..|+.+|+.+|
T Consensus 214 ~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 214 TPEEIAAAVAFLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred CHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence 44679999998887654 35899999765
No 143
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=38.25 E-value=80 Score=29.05 Aligned_cols=24 Identities=8% Similarity=-0.119 Sum_probs=18.2
Q ss_pred cccCCchhhccChHHHHHhhhhHh
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLA 34 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~ 34 (289)
+.+++...+.+|+.++...++.+.
T Consensus 104 ~~~~~~~~~~vN~~g~~~l~~~~~ 127 (322)
T PRK07453 104 SPQGYELSMATNHLGHFLLCNLLL 127 (322)
T ss_pred CHHHHHHHHhHHHHHHHHHHHHHH
Confidence 455667788999999888876643
No 144
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=36.54 E-value=2.4e+02 Score=24.61 Aligned_cols=124 Identities=10% Similarity=-0.010 Sum_probs=64.5
Q ss_pred cccCCchhhccChHHHHHhhhhHhhh---ccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-----
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAVH---TNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS----- 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l~---tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e----- 82 (289)
+.+++...+.+|+.+....++.+.-. .+.++...++. . ....|.. +..-|...+...+
T Consensus 115 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss-~-----~~~~~~~--------~~~~Y~~sK~a~~~~~~~ 180 (256)
T PRK12748 115 TAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTS-G-----QSLGPMP--------DELAYAATKGAIEAFTKS 180 (256)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECC-c-----cccCCCC--------CchHHHHHHHHHHHHHHH
Confidence 33455667889999999999885421 23334433221 0 0011111 1122544333222
Q ss_pred -----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHH
Q 042656 83 -----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAE 157 (289)
Q Consensus 83 -----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~ 157 (289)
...+..++.++|+.+........ ... ... -.+ |+. .+...+.+|+
T Consensus 181 la~e~~~~~i~v~~i~Pg~~~t~~~~~~--~~~----------~~~--~~~--------~~~--------~~~~~~~~a~ 230 (256)
T PRK12748 181 LAPELAEKGITVNAVNPGPTDTGWITEE--LKH----------HLV--PKF--------PQG--------RVGEPVDAAR 230 (256)
T ss_pred HHHHHHHhCeEEEEEEeCcccCCCCChh--HHH----------hhh--ccC--------CCC--------CCcCHHHHHH
Confidence 23589999999987764422110 000 000 011 221 1234577999
Q ss_pred HHHHHhcCCC--cCCCeeEecCC
Q 042656 158 QQIWAATTDR--AKNQAFNCTNG 178 (289)
Q Consensus 158 ~~i~aa~~p~--a~ge~FNi~dg 178 (289)
.+.|.+.... ..|+.+++..|
T Consensus 231 ~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 231 LIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred HHHHHhCcccccccCCEEEecCC
Confidence 9888776543 24899998665
No 145
>PRK12742 oxidoreductase; Provisional
Probab=34.79 E-value=2.9e+02 Score=23.55 Aligned_cols=126 Identities=11% Similarity=0.048 Sum_probs=63.3
Q ss_pred ccCCchhhccChHHHHHhhhhHhhhc-cCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHH-----HHHHHh---
Q 042656 12 ISDPSLTVGASSRSLHNSLLPLAVHT-NICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAV-----EDIAAS--- 82 (289)
Q Consensus 12 ~~~p~~~~~~~~~~~~~~l~~~~l~t-G~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~q-----Ed~L~e--- 82 (289)
.++....+.+|+.+....++.+.-.- ..++...++. ..+. ..|. . +..-|.. +.+.+.
T Consensus 96 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS-~~~~----~~~~------~--~~~~Y~~sKaa~~~~~~~la~ 162 (237)
T PRK12742 96 ADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGS-VNGD----RMPV------A--GMAAYAASKSALQGMARGLAR 162 (237)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEec-cccc----cCCC------C--CCcchHHhHHHHHHHHHHHHH
Confidence 34556778889999888877755321 1223333121 1110 1111 1 1222443 333332
Q ss_pred --cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHH
Q 042656 83 --YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQI 160 (289)
Q Consensus 83 --~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i 160 (289)
...+..+++++|+.|..+-....... ...+ ....|+.- +...+.+++++.
T Consensus 163 ~~~~~gi~v~~v~Pg~~~t~~~~~~~~~------~~~~--~~~~~~~~--------------------~~~p~~~a~~~~ 214 (237)
T PRK12742 163 DFGPRGITINVVQPGPIDTDANPANGPM------KDMM--HSFMAIKR--------------------HGRPEEVAGMVA 214 (237)
T ss_pred HHhhhCeEEEEEecCcccCCccccccHH------HHHH--HhcCCCCC--------------------CCCHHHHHHHHH
Confidence 34689999999999876531111000 0001 01112111 234567999999
Q ss_pred HHhcCCC--cCCCeeEecCC
Q 042656 161 WAATTDR--AKNQAFNCTNG 178 (289)
Q Consensus 161 ~aa~~p~--a~ge~FNi~dg 178 (289)
+.+.... ..|+.+++..|
T Consensus 215 ~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 215 WLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred HHcCcccCcccCCEEEeCCC
Confidence 8886543 25788877544
No 146
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=32.97 E-value=2e+02 Score=24.57 Aligned_cols=69 Identities=12% Similarity=0.093 Sum_probs=42.2
Q ss_pred cCCCceEEEeccCceeecCCCchhh-hHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHH
Q 042656 83 YSPAVTYSVHRSSIIIGASSRSLNN-SLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIW 161 (289)
Q Consensus 83 ~~~g~~~~ivRP~~V~G~~~gn~~n-l~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~ 161 (289)
...+..++++||+.|-.....+... ....+ ... . | ...+...+.+++++++
T Consensus 174 ~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~----------~~~--~--------~--------~~~~~~~~~va~~~~~ 225 (247)
T PRK05565 174 APSGIRVNAVAPGAIDTEMWSSFSEEDKEGL----------AEE--I--------P--------LGRLGKPEEIAKVVLF 225 (247)
T ss_pred HHcCeEEEEEEECCccCccccccChHHHHHH----------Hhc--C--------C--------CCCCCCHHHHHHHHHH
Confidence 3568999999999987654322211 11000 001 1 1 1123466789999999
Q ss_pred HhcCCC--cCCCeeEecCCC
Q 042656 162 AATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 162 aa~~p~--a~ge~FNi~dg~ 179 (289)
.+..+. ..||.+++.+|.
T Consensus 226 l~~~~~~~~~g~~~~~~~~~ 245 (247)
T PRK05565 226 LASDDASYITGQIITVDGGW 245 (247)
T ss_pred HcCCccCCccCcEEEecCCc
Confidence 987654 368999998874
No 147
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=32.89 E-value=2.4e+02 Score=24.24 Aligned_cols=125 Identities=8% Similarity=0.068 Sum_probs=65.2
Q ss_pred CchhhccChHHHHHhhhhHh---hhccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHH-----HHHh----
Q 042656 15 PSLTVGASSRSLHNSLLPLA---VHTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVED-----IAAS---- 82 (289)
Q Consensus 15 p~~~~~~~~~~~~~~l~~~~---l~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd-----~L~e---- 82 (289)
....+.+|+.+....++.+. ...+..+...++.. ... .|.. |..-|...| +.+.
T Consensus 111 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~---------~~~---~~~~--~~~~Y~~sK~a~~~l~~~la~~ 176 (253)
T PRK08642 111 FQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTN---------LFQ---NPVV--PYHDYTTAKAALLGLTRNLAAE 176 (253)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCc---------ccc---CCCC--CccchHHHHHHHHHHHHHHHHH
Confidence 34568899999999888854 12332233321110 000 1111 111255433 3332
Q ss_pred -cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHH
Q 042656 83 -YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIW 161 (289)
Q Consensus 83 -~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~ 161 (289)
...+...+.++|+.|--+.......- ..+. +.....|+ ..+...+.+|+++++
T Consensus 177 ~~~~~i~v~~i~pG~v~t~~~~~~~~~----~~~~----~~~~~~~~------------------~~~~~~~~va~~~~~ 230 (253)
T PRK08642 177 LGPYGITVNMVSGGLLRTTDASAATPD----EVFD----LIAATTPL------------------RKVTTPQEFADAVLF 230 (253)
T ss_pred hCccCeEEEEEeecccCCchhhccCCH----HHHH----HHHhcCCc------------------CCCCCHHHHHHHHHH
Confidence 24689999999998865422110000 0111 11122333 114556779999999
Q ss_pred HhcCCC--cCCCeeEecCCC
Q 042656 162 AATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 162 aa~~p~--a~ge~FNi~dg~ 179 (289)
.+..+. ..|+.+-|..|.
T Consensus 231 l~~~~~~~~~G~~~~vdgg~ 250 (253)
T PRK08642 231 FASPWARAVTGQNLVVDGGL 250 (253)
T ss_pred HcCchhcCccCCEEEeCCCe
Confidence 987543 468988877664
No 148
>PRK08017 oxidoreductase; Provisional
Probab=32.60 E-value=1.6e+02 Score=25.62 Aligned_cols=22 Identities=5% Similarity=-0.118 Sum_probs=17.2
Q ss_pred cccccchHHHHHHHHHHhcCCC
Q 042656 146 FCDMSDSRVLAEQQIWAATTDR 167 (289)
Q Consensus 146 ~~~~~~~~~la~~~i~aa~~p~ 167 (289)
.+.+.+.+.+|++++.++..++
T Consensus 203 ~~~~~~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 203 ARFTLGPEAVVPKLRHALESPK 224 (256)
T ss_pred hhcCCCHHHHHHHHHHHHhCCC
Confidence 3456888999999999987654
No 149
>PRK08219 short chain dehydrogenase; Provisional
Probab=32.24 E-value=1.3e+02 Score=25.41 Aligned_cols=29 Identities=7% Similarity=0.019 Sum_probs=22.3
Q ss_pred cccchHHHHHHHHHHhcCCCcCCCeeEecC
Q 042656 148 DMSDSRVLAEQQIWAATTDRAKNQAFNCTN 177 (289)
Q Consensus 148 ~~~~~~~la~~~i~aa~~p~a~ge~FNi~d 177 (289)
.+++.+.+|++++.+++++. .+.+||+.=
T Consensus 194 ~~~~~~dva~~~~~~l~~~~-~~~~~~~~~ 222 (227)
T PRK08219 194 RYLRPETVAKAVRFAVDAPP-DAHITEVVV 222 (227)
T ss_pred CCCCHHHHHHHHHHHHcCCC-CCccceEEE
Confidence 35778889999999998763 567887763
No 150
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=31.57 E-value=1.9e+02 Score=24.74 Aligned_cols=63 Identities=14% Similarity=0.151 Sum_probs=39.8
Q ss_pred cCCCceEEEeccCceeecCC-CchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHH
Q 042656 83 YSPAVTYSVHRSSIIIGASS-RSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIW 161 (289)
Q Consensus 83 ~~~g~~~~ivRP~~V~G~~~-gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~ 161 (289)
...++.++++||+.|+++-. ...++ . ..+. . ..+.+.+.+++.+++
T Consensus 169 ~~~gi~v~~i~pg~v~~~~~~~~~~~---------------~-~~~~--------~---------~~~~~~~~va~~~~~ 215 (238)
T PRK05786 169 LGRGIRVNGIAPTTISGDFEPERNWK---------------K-LRKL--------G---------DDMAPPEDFAKVIIW 215 (238)
T ss_pred hhcCeEEEEEecCccCCCCCchhhhh---------------h-hccc--------c---------CCCCCHHHHHHHHHH
Confidence 34689999999999998732 11000 0 0011 0 123456779999999
Q ss_pred HhcCCC--cCCCeeEecCC
Q 042656 162 AATTDR--AKNQAFNCTNG 178 (289)
Q Consensus 162 aa~~p~--a~ge~FNi~dg 178 (289)
++..+. ..|+.+.+.+|
T Consensus 216 ~~~~~~~~~~g~~~~~~~~ 234 (238)
T PRK05786 216 LLTDEADWVDGVVIPVDGG 234 (238)
T ss_pred HhcccccCccCCEEEECCc
Confidence 997654 36888888654
No 151
>PF13812 PPR_3: Pentatricopeptide repeat domain
Probab=31.23 E-value=57 Score=18.85 Aligned_cols=17 Identities=12% Similarity=0.302 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHCCCCC
Q 042656 273 KSIRTWVKKLREMKIIP 289 (289)
Q Consensus 273 e~~~~~~~~lr~~~iiP 289 (289)
+...++++.|++.||-|
T Consensus 18 ~~a~~~~~~M~~~gv~P 34 (34)
T PF13812_consen 18 DAALQLFDEMKEQGVKP 34 (34)
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 34678889999999887
No 152
>PF11248 DUF3046: Protein of unknown function (DUF3046); InterPro: IPR021408 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=30.95 E-value=41 Score=24.29 Aligned_cols=44 Identities=25% Similarity=0.462 Sum_probs=28.2
Q ss_pred chHHHHHHHHHHhcCCCcCCCeeEecCCCccCHHHHHHHHHHHhCCCC
Q 042656 151 DSRVLAEQQIWAATTDRAKNQAFNCTNGDVFTWKSLWKLLSEIFDVEF 198 (289)
Q Consensus 151 ~~~~la~~~i~aa~~p~a~ge~FNi~dg~~~s~~~lw~~la~~~G~~~ 198 (289)
+++.+|+-++.......+..|+. .+| +.-+++|.+||+.|+++.
T Consensus 18 ~~~~la~dhvL~~LGgrT~~eAL--~~G--~dpr~VW~AlC~~~dVP~ 61 (63)
T PF11248_consen 18 YGRSLARDHVLSELGGRTAAEAL--EAG--VDPRDVWRALCDAFDVPE 61 (63)
T ss_pred hHHHHHHhcchhhcCCcCHHHHH--HcC--CCHHHHHHHHHHHcCCCC
Confidence 44556666666555444445543 233 345999999999998864
No 153
>PRK12743 oxidoreductase; Provisional
Probab=30.40 E-value=2.8e+02 Score=24.18 Aligned_cols=127 Identities=9% Similarity=0.050 Sum_probs=65.9
Q ss_pred ccCCchhhccChHHHHHhhhhHhh---hcc-CceeecccccccCccCCCCCCCCCCCCCCCCCCChHHH-----HHHHHh
Q 042656 12 ISDPSLTVGASSRSLHNSLLPLAV---HTN-ICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAV-----EDIAAS 82 (289)
Q Consensus 12 ~~~p~~~~~~~~~~~~~~l~~~~l---~tG-~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~q-----Ed~L~e 82 (289)
.++....+.+|+.+....++.+.- ..| .++...++. ..+..|.. +..-|.. +.+.+.
T Consensus 101 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS------------~~~~~~~~--~~~~Y~~sK~a~~~l~~~ 166 (256)
T PRK12743 101 FDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITS------------VHEHTPLP--GASAYTAAKHALGGLTKA 166 (256)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEee------------ccccCCCC--CcchhHHHHHHHHHHHHH
Confidence 344556678899988888876431 222 123333121 01111211 1222443 333322
Q ss_pred -----cCCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHH
Q 042656 83 -----YSPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAE 157 (289)
Q Consensus 83 -----~~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~ 157 (289)
...+...+.++|+.|.++..+....-.... ...+.|+.- ....+.+|.
T Consensus 167 la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~-------~~~~~~~~~--------------------~~~~~dva~ 219 (256)
T PRK12743 167 MALELVEHGILVNAVAPGAIATPMNGMDDSDVKPD-------SRPGIPLGR--------------------PGDTHEIAS 219 (256)
T ss_pred HHHHhhhhCeEEEEEEeCCccCccccccChHHHHH-------HHhcCCCCC--------------------CCCHHHHHH
Confidence 346899999999999987533211111000 011222211 234567999
Q ss_pred HHHHHhcCCC--cCCCeeEecCCC
Q 042656 158 QQIWAATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 158 ~~i~aa~~p~--a~ge~FNi~dg~ 179 (289)
++.+.+..+. ..|+.+++..|.
T Consensus 220 ~~~~l~~~~~~~~~G~~~~~dgg~ 243 (256)
T PRK12743 220 LVAWLCSEGASYTTGQSLIVDGGF 243 (256)
T ss_pred HHHHHhCccccCcCCcEEEECCCc
Confidence 9888886543 358888886664
No 154
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=29.31 E-value=3.8e+02 Score=23.27 Aligned_cols=32 Identities=13% Similarity=0.281 Sum_probs=23.7
Q ss_pred cchHHHHHHHHHHhcCCC--cCCCeeEecCCCcc
Q 042656 150 SDSRVLAEQQIWAATTDR--AKNQAFNCTNGDVF 181 (289)
Q Consensus 150 ~~~~~la~~~i~aa~~p~--a~ge~FNi~dg~~~ 181 (289)
...+.+++++++.+.... ..|+.+++..|...
T Consensus 219 ~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~~ 252 (255)
T PRK06113 219 GQPQDIANAALFLCSPAASWVSGQILTVSGGGVQ 252 (255)
T ss_pred cCHHHHHHHHHHHcCccccCccCCEEEECCCccc
Confidence 355679999999886543 25899999988653
No 155
>PRK07985 oxidoreductase; Provisional
Probab=28.88 E-value=3.8e+02 Score=24.29 Aligned_cols=127 Identities=11% Similarity=0.039 Sum_probs=67.7
Q ss_pred cccCCchhhccChHHHHHhhhhHhh--hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh------
Q 042656 11 PISDPSLTVGASSRSLHNSLLPLAV--HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS------ 82 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~~l--~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e------ 82 (289)
+.++....+.+|+.++...++.+.- ..+. +...++. ..+ ..|. | ...-|...|.-.+
T Consensus 149 ~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g-~iv~iSS-~~~-----~~~~----~----~~~~Y~asKaal~~l~~~l 213 (294)
T PRK07985 149 TSEQFQKTFAINVFALFWLTQEAIPLLPKGA-SIITTSS-IQA-----YQPS----P----HLLDYAATKAAILNYSRGL 213 (294)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHhhhcCC-EEEEECC-chh-----ccCC----C----CcchhHHHHHHHHHHHHHH
Confidence 3455567889999999999988652 2332 2322121 000 1111 1 1122555433221
Q ss_pred ----cCCCceEEEeccCceeecCC--CchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHH
Q 042656 83 ----YSPAVTYSVHRSSIIIGASS--RSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLA 156 (289)
Q Consensus 83 ----~~~g~~~~ivRP~~V~G~~~--gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la 156 (289)
...+...++|+|+.|.++-. .....-.. ..+ ....|+.- +...+.+|
T Consensus 214 a~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~-----~~~--~~~~~~~r--------------------~~~pedva 266 (294)
T PRK07985 214 AKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKI-----PQF--GQQTPMKR--------------------AGQPAELA 266 (294)
T ss_pred HHHHhHhCcEEEEEECCcCccccccccCCCHHHH-----HHH--hccCCCCC--------------------CCCHHHHH
Confidence 34689999999999998732 11101000 001 11222221 33456799
Q ss_pred HHHHHHhcCCC--cCCCeeEecCCC
Q 042656 157 EQQIWAATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 157 ~~~i~aa~~p~--a~ge~FNi~dg~ 179 (289)
+++.+.+..+. ..|+.+.|..|.
T Consensus 267 ~~~~fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 267 PVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred HHHHhhhChhcCCccccEEeeCCCe
Confidence 99998886543 257888887664
No 156
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=28.12 E-value=2.5e+02 Score=24.10 Aligned_cols=17 Identities=6% Similarity=0.059 Sum_probs=14.5
Q ss_pred CCCceEEEeccCceeec
Q 042656 84 SPAVTYSVHRSSIIIGA 100 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~ 100 (289)
..++.++++||+.|...
T Consensus 176 ~~gi~v~~v~pg~v~t~ 192 (239)
T PRK07666 176 KHNIRVTALTPSTVATD 192 (239)
T ss_pred ccCcEEEEEecCcccCc
Confidence 46899999999988765
No 157
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=26.04 E-value=1.7e+02 Score=25.44 Aligned_cols=132 Identities=9% Similarity=0.034 Sum_probs=65.3
Q ss_pred CCchhhccChHHHHHhhhhHhh---hccCceeecccccccCccCCCCCCCCCCCCCCCCCCChHHHHHHHHh-----cCC
Q 042656 14 DPSLTVGASSRSLHNSLLPLAV---HTNICKYQGLPFRYFGQLIGHDPPFKEDSVRLPFPNFYYAVEDIAAS-----YSP 85 (289)
Q Consensus 14 ~p~~~~~~~~~~~~~~l~~~~l---~tG~k~yg~~~~~~~g~~~~~~~P~~E~~pr~p~p~fyy~qEd~L~e-----~~~ 85 (289)
+....+.+|+.++....+.+.- .++.++....+. ..+ ..|.....+ ..-....++.+.+. ...
T Consensus 111 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss-~~~-----~~~~~~~~~---Y~~sK~a~~~~~~~la~e~~~~ 181 (256)
T PRK06124 111 AIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITS-IAG-----QVARAGDAV---YPAAKQGLTGLMRALAAEFGPH 181 (256)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEee-chh-----ccCCCCccH---hHHHHHHHHHHHHHHHHHHHHh
Confidence 3445577888888888866431 244455544221 111 111111100 00111222322222 335
Q ss_pred CceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHhcC
Q 042656 86 AVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAATT 165 (289)
Q Consensus 86 g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa~~ 165 (289)
+...++++|+.|.++.......-. .....+ + .. .+. ..+...+.+++++++++..
T Consensus 182 ~i~v~~i~pg~v~t~~~~~~~~~~---~~~~~~-~-~~--~~~------------------~~~~~~~~~a~~~~~l~~~ 236 (256)
T PRK06124 182 GITSNAIAPGYFATETNAAMAADP---AVGPWL-A-QR--TPL------------------GRWGRPEEIAGAAVFLASP 236 (256)
T ss_pred CcEEEEEEECCccCcchhhhccCh---HHHHHH-H-hc--CCC------------------CCCCCHHHHHHHHHHHcCc
Confidence 899999999999987532111100 000001 0 11 122 1145567799999998876
Q ss_pred CCc--CCCeeEecCCC
Q 042656 166 DRA--KNQAFNCTNGD 179 (289)
Q Consensus 166 p~a--~ge~FNi~dg~ 179 (289)
+.. .|+.+.+.+|.
T Consensus 237 ~~~~~~G~~i~~dgg~ 252 (256)
T PRK06124 237 AASYVNGHVLAVDGGY 252 (256)
T ss_pred ccCCcCCCEEEECCCc
Confidence 543 47877776553
No 158
>PF07582 AP_endonuc_2_N: AP endonuclease family 2 C terminus; InterPro: IPR011418 DNA damaging agents such as the anti-tumour drugs bleomycin and neocarzinostatin or those that generate oxygen radicals produce a variety of lesions in DNA. Amongst these is base-loss which forms apurinic/apyrimidinic (AP) sites or strand breaks with atypical 3' termini. DNA repair at the AP sites is initiated by specific endonuclease cleavage of the phosphodiester backbone. Such endonucleases are also generally capable of removing blocking groups from the 3' terminus of DNA strand breaks. AP endonucleases can be classified into two families based on sequence similarity []. This entry represents a highly-conserved sequence found at the C terminus of several apurinic/apyrimidinic (AP) endonucleases in a range of Gram-positive and Gram-negative bacteria. ; PDB: 3LMZ_A 2ZDS_D.
Probab=25.49 E-value=1e+02 Score=21.53 Aligned_cols=17 Identities=24% Similarity=0.302 Sum_probs=14.6
Q ss_pred cChHHHHHHHHHHHHHC
Q 042656 269 VDTMKSIRTWVKKLREM 285 (289)
Q Consensus 269 ~dt~e~~~~~~~~lr~~ 285 (289)
.+..+|+.+..+.+|+.
T Consensus 27 ~~~~~G~~~a~~~lr~~ 43 (55)
T PF07582_consen 27 MDPEEGAREAAAFLRKL 43 (55)
T ss_dssp TSHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 47789999999999876
No 159
>PRK07577 short chain dehydrogenase; Provisional
Probab=25.44 E-value=1.8e+02 Score=24.87 Aligned_cols=30 Identities=13% Similarity=0.217 Sum_probs=22.4
Q ss_pred cchHHHHHHHHHHhcCCC--cCCCeeEecCCC
Q 042656 150 SDSRVLAEQQIWAATTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 150 ~~~~~la~~~i~aa~~p~--a~ge~FNi~dg~ 179 (289)
...+.+|+++++.+..+. ..|+.+++..|+
T Consensus 201 ~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 201 GTPEEVAAAIAFLLSDDAGFITGQVLGVDGGG 232 (234)
T ss_pred cCHHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence 355779999999887653 358999987664
No 160
>PRK08628 short chain dehydrogenase; Provisional
Probab=25.03 E-value=3.1e+02 Score=23.81 Aligned_cols=30 Identities=13% Similarity=0.273 Sum_probs=22.2
Q ss_pred ccchHHHHHHHHHHhcCCC--cCCCeeEecCC
Q 042656 149 MSDSRVLAEQQIWAATTDR--AKNQAFNCTNG 178 (289)
Q Consensus 149 ~~~~~~la~~~i~aa~~p~--a~ge~FNi~dg 178 (289)
+.+.+.+|+++++++..+. ..|+.+.+..|
T Consensus 218 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg 249 (258)
T PRK08628 218 MTTAEEIADTAVFLLSERSSHTTGQWLFVDGG 249 (258)
T ss_pred CCCHHHHHHHHHHHhChhhccccCceEEecCC
Confidence 4667889999999887653 45788877544
No 161
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=23.85 E-value=4e+02 Score=22.89 Aligned_cols=28 Identities=14% Similarity=0.386 Sum_probs=20.6
Q ss_pred chHHHHHHHHHHhcCCC--cCCCeeEecCC
Q 042656 151 DSRVLAEQQIWAATTDR--AKNQAFNCTNG 178 (289)
Q Consensus 151 ~~~~la~~~i~aa~~p~--a~ge~FNi~dg 178 (289)
+.+.+|+.+++++.++. ..|+.+.+..|
T Consensus 218 ~~e~va~~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 218 EADEVAETIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred CHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence 46789999999988764 35777766543
No 162
>PRK12744 short chain dehydrogenase; Provisional
Probab=21.83 E-value=2e+02 Score=25.16 Aligned_cols=32 Identities=13% Similarity=0.089 Sum_probs=24.6
Q ss_pred ccchHHHHHHHHHHhcCCC-cCCCeeEecCCCc
Q 042656 149 MSDSRVLAEQQIWAATTDR-AKNQAFNCTNGDV 180 (289)
Q Consensus 149 ~~~~~~la~~~i~aa~~p~-a~ge~FNi~dg~~ 180 (289)
+.+.+.+|+++.+++.... ..||.+++..|..
T Consensus 223 ~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~~ 255 (257)
T PRK12744 223 LTDIEDIVPFIRFLVTDGWWITGQTILINGGYT 255 (257)
T ss_pred CCCHHHHHHHHHHhhcccceeecceEeecCCcc
Confidence 6677889999999887432 2589999987754
No 163
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=21.81 E-value=3.1e+02 Score=23.34 Aligned_cols=69 Identities=13% Similarity=0.208 Sum_probs=40.3
Q ss_pred CCCceEEEeccCceeecCCCchhhhHHHHHHHHHHHHHhCCCeEEEeccccCCCCCcccccccccccchHHHHHHHHHHh
Q 042656 84 SPAVTYSVHRSSIIIGASSRSLNNSLLTLAVYATICRHQGLPFRYLAIHGSSLSGNKYTWEHFCDMSDSRVLAEQQIWAA 163 (289)
Q Consensus 84 ~~g~~~~ivRP~~V~G~~~gn~~nl~~~l~vyaal~~~~g~pl~f~~~~~~~~pG~~~~~~~~~~~~~~~~la~~~i~aa 163 (289)
..++.+++++|+.+.++.......-... .+ ..+.|+.- ....+.+++++.+.+
T Consensus 170 ~~~i~v~~i~pg~~~t~~~~~~~~~~~~-----~~--~~~~~~~~--------------------~~~~~~~a~~~~~l~ 222 (242)
T TIGR01829 170 TKGVTVNTISPGYIATDMVMAMREDVLN-----SI--VAQIPVGR--------------------LGRPEEIAAAVAFLA 222 (242)
T ss_pred hhCeEEEEEeeCCCcCccccccchHHHH-----HH--HhcCCCCC--------------------CcCHHHHHHHHHHHc
Confidence 4689999999999987743221111100 01 01223211 223456899888877
Q ss_pred cCCC--cCCCeeEecCCC
Q 042656 164 TTDR--AKNQAFNCTNGD 179 (289)
Q Consensus 164 ~~p~--a~ge~FNi~dg~ 179 (289)
.++. ..||.+.+.+|.
T Consensus 223 ~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 223 SEEAGYITGATLSINGGL 240 (242)
T ss_pred CchhcCccCCEEEecCCc
Confidence 6653 358888888774
No 164
>PRK06197 short chain dehydrogenase; Provisional
Probab=21.49 E-value=6e+02 Score=22.87 Aligned_cols=86 Identities=8% Similarity=-0.113 Sum_probs=39.9
Q ss_pred cCCchhhccChHHHHHhhhhH---hhhccCceeeccc-ccccCccCCCCCCCCCCCCCCC-CCCChHHHHHHHHh-----
Q 042656 13 SDPSLTVGASSRSLHNSLLPL---AVHTNICKYQGLP-FRYFGQLIGHDPPFKEDSVRLP-FPNFYYAVEDIAAS----- 82 (289)
Q Consensus 13 ~~p~~~~~~~~~~~~~~l~~~---~l~tG~k~yg~~~-~~~~g~~~~~~~P~~E~~pr~p-~p~fyy~qEd~L~e----- 82 (289)
++....+.+|+.+.....+.+ ...++.++...++ ..+... ...++.+.....+ .+...|.+.|...+
T Consensus 115 ~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~---~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~ 191 (306)
T PRK06197 115 DGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIR---AAIHFDDLQWERRYNRVAAYGQSKLANLLFTYE 191 (306)
T ss_pred CCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhcc---CCCCccccCcccCCCcHHHHHHHHHHHHHHHHH
Confidence 344567889999844433332 2334445665544 221110 1123332221111 23345776664433
Q ss_pred -----cCCCceEE--EeccCceeecC
Q 042656 83 -----YSPAVTYS--VHRSSIIIGAS 101 (289)
Q Consensus 83 -----~~~g~~~~--ivRP~~V~G~~ 101 (289)
...+...+ .+.|+.|...-
T Consensus 192 la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 192 LQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred HHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 22454444 34798886553
No 165
>PRK06194 hypothetical protein; Provisional
Probab=21.16 E-value=5.8e+02 Score=22.52 Aligned_cols=23 Identities=9% Similarity=0.186 Sum_probs=17.6
Q ss_pred cccCCchhhccChHHHHHhhhhH
Q 042656 11 PISDPSLTVGASSRSLHNSLLPL 33 (289)
Q Consensus 11 ~~~~p~~~~~~~~~~~~~~l~~~ 33 (289)
+.+++...+.+|+.++.+.++.+
T Consensus 103 ~~~~~~~~~~~N~~g~~~~~~~~ 125 (287)
T PRK06194 103 SLADWEWVLGVNLWGVIHGVRAF 125 (287)
T ss_pred CHHHHHHHHhhccHHHHHHHHHH
Confidence 44555667889999999988775
No 166
>PF06755 DUF1219: Protein of unknown function (DUF1219); InterPro: IPR009610 This family consists of several hypothetical proteins which seem to be specific to the enterobacteria Escherichia coli and Shigella flexneri. Family members are often known as YeeV proteins and are around 125 residues in length. The function of this family is unknown.
Probab=20.69 E-value=4.1e+02 Score=21.41 Aligned_cols=76 Identities=13% Similarity=0.255 Sum_probs=41.6
Q ss_pred cCHHHHHHHHHH-----HhCCCCCCCCCCCcccHHHHHHHh-------HHHHHHHHHHhCCCccccccccchhhhhhhhc
Q 042656 181 FTWKSLWKLLSE-----IFDVEFVPFDEKEKFDVVEMMEEK-------GEIWDEIVEKHGLYKTKMEEITCFEALNTVLH 248 (289)
Q Consensus 181 ~s~~~lw~~la~-----~~G~~~~~~~~~~p~~l~~~~~~~-------~~~W~~i~~k~gl~~~~l~~l~~w~f~d~~~~ 248 (289)
.|--++|+.|+. .||+...- -|++-...+..+ .++-..+|+||.|..-.-..+ +| .. .
T Consensus 16 ~spV~vWQ~llt~LL~~HYGLtLND----T~f~de~vI~~hidaGIs~~~AVN~LVeKY~LvRiD~~gF-s~--~~---q 85 (114)
T PF06755_consen 16 PSPVEVWQQLLTYLLEQHYGLTLND----TPFSDETVIQEHIDAGISPADAVNFLVEKYELVRIDRNGF-SW--QE---Q 85 (114)
T ss_pred CCHHHHHHHHHHHHHHHhcCCccCC----CccchHHHHHHHHHhCCCHHHHHHHHHHHHhhhhcCCccc-Cc--cC---C
Confidence 345666766554 57877664 344443333322 455678899998765332110 11 00 1
Q ss_pred ccccccccHHHHHhc-CCC
Q 042656 249 LQFQHVSSMNKSREF-GFF 266 (289)
Q Consensus 249 ~~~~~~~d~~Kar~~-Gw~ 266 (289)
.++-..+|+-+||+. |-.
T Consensus 86 sP~l~~~DilrAr~a~gl~ 104 (114)
T PF06755_consen 86 SPYLTAIDILRARRATGLM 104 (114)
T ss_pred CchhhHHHHHHHHHHhchh
Confidence 233457788888886 753
No 167
>PF00325 Crp: Bacterial regulatory proteins, crp family; InterPro: IPR001808 Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. These proteins are very diverse, but for convenience may be grouped into subfamilies on the basis of sequence similarity. This family groups together a range of proteins, including anr, crp, clp, cysR, fixK, flp, fnr, fnrN, hlyX and ntcA [, ]. Within this family, the HTH motif is situated towards the C terminus.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2OZ6_A 1CGP_B 2GZW_C 1O3T_B 3ROU_A 2CGP_A 3RDI_A 1I5Z_A 3IYD_H 3FWE_B ....
Probab=20.66 E-value=1e+02 Score=19.09 Aligned_cols=19 Identities=26% Similarity=0.319 Sum_probs=15.1
Q ss_pred ChHHHHHHHHHHHHHCCCC
Q 042656 270 DTMKSIRTWVKKLREMKII 288 (289)
Q Consensus 270 dt~e~~~~~~~~lr~~~ii 288 (289)
.+.|...+++.+|++.|+|
T Consensus 14 ~t~ETVSR~l~~l~~~glI 32 (32)
T PF00325_consen 14 LTRETVSRILKKLERQGLI 32 (32)
T ss_dssp S-HHHHHHHHHHHHHTTSE
T ss_pred CcHHHHHHHHHHHHHcCCC
Confidence 3567788999999999886
Done!