Query 042662
Match_columns 690
No_of_seqs 632 out of 5237
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 08:21:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042662.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042662hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.4E-75 3E-80 696.2 48.9 659 2-676 156-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 5E-52 1.1E-56 494.2 33.6 446 2-453 109-589 (968)
3 KOG4194 Membrane glycoprotein 100.0 1.9E-37 4.2E-42 313.9 6.8 393 13-426 55-453 (873)
4 KOG4194 Membrane glycoprotein 100.0 6.5E-37 1.4E-41 310.1 6.8 396 36-451 54-455 (873)
5 KOG0472 Leucine-rich repeat pr 100.0 7.7E-38 1.7E-42 303.8 -16.0 417 11-447 46-540 (565)
6 KOG0444 Cytoskeletal regulator 100.0 6.9E-36 1.5E-40 304.3 -2.8 389 6-420 3-394 (1255)
7 KOG0472 Leucine-rich repeat pr 100.0 2E-37 4.3E-42 301.0 -13.6 400 5-425 63-541 (565)
8 KOG0444 Cytoskeletal regulator 100.0 8.8E-35 1.9E-39 296.3 -3.8 371 31-429 4-379 (1255)
9 KOG0618 Serine/threonine phosp 100.0 1.9E-33 4.2E-38 299.8 -6.0 389 9-423 44-487 (1081)
10 KOG0618 Serine/threonine phosp 100.0 7E-31 1.5E-35 280.4 -4.1 395 3-422 61-510 (1081)
11 KOG1187 Serine/threonine prote 100.0 3.3E-28 7.2E-33 251.9 14.3 161 511-675 61-355 (361)
12 PLN03210 Resistant to P. syrin 99.9 2.3E-23 4.9E-28 248.7 26.4 336 29-398 553-903 (1153)
13 PLN03210 Resistant to P. syrin 99.9 2.2E-23 4.7E-28 248.9 24.8 338 4-375 552-904 (1153)
14 KOG4237 Extracellular matrix p 99.9 3.5E-25 7.7E-30 215.8 -3.3 392 11-422 68-498 (498)
15 PRK15387 E3 ubiquitin-protein 99.9 1E-20 2.3E-25 209.8 18.1 266 96-410 202-467 (788)
16 PRK15387 E3 ubiquitin-protein 99.9 8.2E-21 1.8E-25 210.6 16.3 53 12-71 203-255 (788)
17 KOG4237 Extracellular matrix p 99.8 7.5E-23 1.6E-27 199.6 -4.7 369 2-398 82-498 (498)
18 PRK15370 E3 ubiquitin-protein 99.8 1.4E-19 3E-24 202.3 12.4 246 11-329 179-428 (754)
19 PRK15370 E3 ubiquitin-protein 99.8 1.3E-19 2.8E-24 202.5 10.1 246 96-401 179-428 (754)
20 cd00116 LRR_RI Leucine-rich re 99.7 2.4E-19 5.3E-24 186.4 -0.3 281 123-424 2-319 (319)
21 cd00116 LRR_RI Leucine-rich re 99.7 2.9E-19 6.3E-24 185.8 -2.1 209 99-307 2-235 (319)
22 KOG0617 Ras suppressor protein 99.7 1.1E-18 2.4E-23 151.5 -4.1 156 219-401 31-186 (264)
23 KOG0617 Ras suppressor protein 99.6 4.2E-18 9E-23 147.9 -3.8 163 266-432 30-193 (264)
24 KOG0196 Tyrosine kinase, EPH ( 99.6 1.1E-16 2.4E-21 169.2 3.6 146 514-678 609-897 (996)
25 KOG0193 Serine/threonine prote 99.5 6.3E-14 1.4E-18 145.1 7.8 52 515-575 389-442 (678)
26 KOG1026 Nerve growth factor re 99.5 1.6E-14 3.5E-19 156.0 2.4 84 576-678 674-768 (774)
27 PLN03150 hypothetical protein; 99.4 3.5E-13 7.6E-18 150.7 10.6 118 341-460 419-538 (623)
28 KOG0192 Tyrosine kinase specif 99.4 1.3E-12 2.9E-17 134.7 10.8 45 531-575 47-93 (362)
29 KOG0197 Tyrosine kinases [Sign 99.4 8.3E-13 1.8E-17 136.0 7.8 44 531-575 212-255 (468)
30 KOG1095 Protein tyrosine kinas 99.3 3.9E-12 8.5E-17 142.9 10.0 81 576-675 873-964 (1025)
31 KOG1025 Epidermal growth facto 99.3 3E-12 6.5E-17 136.7 8.0 48 528-575 699-752 (1177)
32 KOG0532 Leucine-rich repeat (L 99.2 3.1E-13 6.7E-18 138.8 -4.7 194 33-255 74-270 (722)
33 KOG0532 Leucine-rich repeat (L 99.2 4.6E-13 1E-17 137.6 -4.5 176 199-383 77-252 (722)
34 KOG0595 Serine/threonine-prote 99.2 2.3E-11 4.9E-16 121.0 6.0 85 525-609 10-216 (429)
35 KOG0194 Protein tyrosine kinas 99.2 3.3E-11 7.1E-16 126.3 7.3 44 576-621 331-375 (474)
36 KOG4721 Serine/threonine prote 99.2 1.4E-11 3E-16 126.5 3.9 34 576-609 280-313 (904)
37 KOG0199 ACK and related non-re 99.2 1.9E-11 4.1E-16 128.5 5.1 45 531-575 116-165 (1039)
38 PHA02988 hypothetical protein; 99.2 1.8E-10 4E-15 117.3 12.3 58 512-575 12-72 (283)
39 COG4886 Leucine-rich repeat (L 99.2 5.7E-11 1.2E-15 127.2 8.0 180 219-429 114-294 (394)
40 KOG4278 Protein tyrosine kinas 99.1 5.3E-11 1.2E-15 123.3 6.1 45 530-575 272-317 (1157)
41 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.1 1.5E-10 3.1E-15 118.1 9.4 34 576-609 179-212 (283)
42 COG4886 Leucine-rich repeat (L 99.1 6.5E-11 1.4E-15 126.7 6.8 197 176-405 97-294 (394)
43 cd08224 STKc_Nek6_Nek7 Catalyt 99.1 3.2E-10 6.8E-15 114.5 11.3 51 525-575 2-56 (267)
44 KOG3207 Beta-tubulin folding c 99.1 7E-12 1.5E-16 125.3 -0.8 163 117-282 119-284 (505)
45 cd05108 PTKc_EGFR Catalytic do 99.1 1.3E-10 2.9E-15 120.4 8.3 50 526-575 8-63 (316)
46 PLN03150 hypothetical protein; 99.1 1.4E-10 3.1E-15 129.9 7.8 113 317-429 419-532 (623)
47 PF07714 Pkinase_Tyr: Protein 99.1 1.4E-10 3E-15 116.6 6.9 45 531-575 5-55 (259)
48 cd05631 STKc_GRK4 Catalytic do 99.1 2.8E-10 6.1E-15 116.1 8.2 34 576-609 170-203 (285)
49 cd05063 PTKc_EphR_A2 Catalytic 99.1 2.1E-10 4.6E-15 115.9 6.6 52 524-575 4-60 (268)
50 KOG3207 Beta-tubulin folding c 99.1 3.3E-11 7.2E-16 120.5 0.7 159 219-377 119-284 (505)
51 cd05068 PTKc_Frk_like Catalyti 99.1 2.6E-10 5.5E-15 114.8 7.1 50 525-575 6-55 (261)
52 cd05038 PTKc_Jak_rpt2 Catalyti 99.1 2.1E-10 4.5E-15 116.9 6.5 46 530-575 9-60 (284)
53 cd06624 STKc_ASK Catalytic dom 99.0 3.2E-10 6.9E-15 114.6 7.6 57 519-575 2-59 (268)
54 KOG1909 Ran GTPase-activating 99.0 1.9E-11 4E-16 119.1 -1.6 85 198-282 158-254 (382)
55 cd05033 PTKc_EphR Catalytic do 99.0 4.6E-10 1E-14 113.3 7.9 51 525-575 4-59 (266)
56 KOG0581 Mitogen-activated prot 99.0 1.3E-09 2.8E-14 107.7 10.4 90 514-610 75-280 (364)
57 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.0 7.2E-10 1.6E-14 113.1 8.9 49 527-575 6-59 (284)
58 cd08228 STKc_Nek6 Catalytic do 99.0 1.4E-09 3.1E-14 109.7 10.9 51 525-575 2-56 (267)
59 KOG1909 Ran GTPase-activating 99.0 1.5E-11 3.3E-16 119.7 -3.8 188 217-425 88-311 (382)
60 cd05072 PTKc_Lyn Catalytic dom 99.0 1.2E-09 2.6E-14 109.8 9.8 48 527-575 8-55 (261)
61 cd05096 PTKc_DDR1 Catalytic do 99.0 2.1E-09 4.5E-14 110.9 10.8 33 576-608 209-243 (304)
62 cd05600 STKc_Sid2p_Dbf2p Catal 99.0 9.1E-10 2E-14 115.1 8.2 84 526-609 2-200 (333)
63 cd05085 PTKc_Fer Catalytic dom 99.0 6.4E-10 1.4E-14 111.1 6.4 44 532-575 2-46 (250)
64 cd05064 PTKc_EphR_A10 Catalyti 99.0 1.6E-09 3.5E-14 109.3 9.4 49 527-575 7-60 (266)
65 KOG1259 Nischarin, modulator o 99.0 8.2E-11 1.8E-15 111.9 -0.4 135 289-428 280-415 (490)
66 cd05616 STKc_cPKC_beta Catalyt 99.0 1.3E-09 2.9E-14 113.3 8.6 34 576-609 170-203 (323)
67 KOG4658 Apoptotic ATPase [Sign 99.0 4.1E-10 8.9E-15 128.8 5.1 129 10-154 523-653 (889)
68 cd05052 PTKc_Abl Catalytic dom 99.0 2.4E-09 5.3E-14 107.8 10.1 48 527-575 8-56 (263)
69 cd05148 PTKc_Srm_Brk Catalytic 99.0 4.9E-10 1.1E-14 112.7 5.0 51 525-575 6-56 (261)
70 cd05587 STKc_cPKC Catalytic do 99.0 1.4E-09 2.9E-14 113.3 8.0 34 576-609 170-203 (324)
71 cd05114 PTKc_Tec_Rlk Catalytic 99.0 2.8E-09 6.1E-14 106.8 10.1 48 527-575 6-53 (256)
72 KOG1094 Discoidin domain recep 99.0 2E-09 4.3E-14 111.5 8.9 121 530-662 543-784 (807)
73 cd05060 PTKc_Syk_like Catalyti 99.0 2.9E-09 6.3E-14 106.8 10.2 34 576-609 167-201 (257)
74 KOG1259 Nischarin, modulator o 98.9 1.6E-10 3.4E-15 110.0 0.7 135 265-404 280-415 (490)
75 PF14580 LRR_9: Leucine-rich r 98.9 4E-10 8.6E-15 103.3 3.3 128 6-150 15-147 (175)
76 cd08229 STKc_Nek7 Catalytic do 98.9 2.7E-09 5.8E-14 107.7 9.7 50 526-575 3-56 (267)
77 cd05043 PTK_Ryk Pseudokinase d 98.9 2.4E-09 5.1E-14 109.0 9.3 51 525-575 6-62 (280)
78 cd05615 STKc_cPKC_alpha Cataly 98.9 1.7E-09 3.7E-14 112.5 8.3 34 576-609 170-203 (323)
79 cd05612 STKc_PRKX_like Catalyt 98.9 1.3E-09 2.7E-14 111.7 7.2 50 526-575 2-55 (291)
80 KOG0201 Serine/threonine prote 98.9 1.3E-09 2.8E-14 109.6 6.9 35 576-610 180-214 (467)
81 cd05067 PTKc_Lck_Blk Catalytic 98.9 4.2E-09 9E-14 105.9 10.8 48 527-575 8-55 (260)
82 cd05048 PTKc_Ror Catalytic Dom 98.9 1.1E-09 2.4E-14 111.6 6.4 34 576-609 195-229 (283)
83 PTZ00263 protein kinase A cata 98.9 2.1E-09 4.6E-14 112.0 8.4 50 526-575 19-72 (329)
84 cd05039 PTKc_Csk_like Catalyti 98.9 3.8E-09 8.2E-14 105.9 9.8 48 526-575 7-54 (256)
85 cd05585 STKc_YPK1_like Catalyt 98.9 3.4E-09 7.5E-14 109.6 9.6 33 576-608 162-194 (312)
86 cd05111 PTK_HER3 Pseudokinase 98.9 1.8E-09 3.8E-14 109.9 7.0 34 576-609 180-214 (279)
87 cd05049 PTKc_Trk Catalytic dom 98.9 2.7E-09 5.9E-14 108.5 8.4 34 576-609 193-227 (280)
88 cd05591 STKc_nPKC_epsilon Cata 98.9 2.7E-09 5.8E-14 110.9 8.5 34 576-609 165-198 (321)
89 cd07848 STKc_CDKL5 Catalytic d 98.9 2.2E-09 4.8E-14 109.6 7.7 50 526-575 2-54 (287)
90 cd05035 PTKc_Axl_like Catalyti 98.9 7E-09 1.5E-13 105.0 11.2 34 576-609 184-218 (273)
91 cd05112 PTKc_Itk Catalytic dom 98.9 5.2E-09 1.1E-13 104.8 10.1 48 527-575 6-53 (256)
92 cd05070 PTKc_Fyn_Yrk Catalytic 98.9 2.6E-09 5.6E-14 107.4 7.8 46 529-575 10-55 (260)
93 cd05036 PTKc_ALK_LTK Catalytic 98.9 1.3E-09 2.9E-14 110.7 5.6 53 523-575 4-63 (277)
94 cd05093 PTKc_TrkB Catalytic do 98.9 4.1E-09 8.9E-14 107.7 9.0 50 526-575 6-61 (288)
95 cd05109 PTKc_HER2 Catalytic do 98.9 2.1E-09 4.6E-14 109.3 6.9 34 576-609 180-214 (279)
96 cd05094 PTKc_TrkC Catalytic do 98.9 2.1E-09 4.6E-14 110.0 6.9 81 576-675 194-285 (291)
97 cd05592 STKc_nPKC_theta_delta 98.9 3E-09 6.6E-14 110.2 8.1 34 576-609 165-198 (316)
98 PTZ00283 serine/threonine prot 98.9 1.7E-09 3.8E-14 118.6 6.5 33 576-608 214-246 (496)
99 PTZ00284 protein kinase; Provi 98.9 1.5E-09 3.3E-14 118.8 6.0 43 517-559 121-164 (467)
100 cd06649 PKc_MEK2 Catalytic dom 98.9 2.3E-09 5.1E-14 111.9 7.1 51 525-575 5-57 (331)
101 cd05102 PTKc_VEGFR3 Catalytic 98.9 3.4E-09 7.3E-14 111.1 8.2 34 576-609 245-279 (338)
102 cd08528 STKc_Nek10 Catalytic d 98.9 5.6E-09 1.2E-13 105.5 9.5 33 576-608 182-214 (269)
103 cd05595 STKc_PKB_beta Catalyti 98.9 3.2E-09 6.9E-14 110.4 7.8 33 576-608 164-196 (323)
104 KOG0597 Serine-threonine prote 98.9 1.8E-09 4E-14 111.3 5.8 33 576-608 169-201 (808)
105 PTZ00426 cAMP-dependent protei 98.9 2.9E-09 6.3E-14 111.4 7.4 34 576-609 197-230 (340)
106 cd05584 STKc_p70S6K Catalytic 98.9 4.5E-09 9.7E-14 109.3 8.7 34 576-609 169-202 (323)
107 cd05071 PTKc_Src Catalytic dom 98.9 3.3E-09 7.2E-14 106.7 7.4 48 527-575 8-55 (262)
108 cd05089 PTKc_Tie1 Catalytic do 98.9 9.9E-09 2.2E-13 105.4 11.0 34 576-609 187-221 (297)
109 KOG4658 Apoptotic ATPase [Sign 98.9 7.9E-10 1.7E-14 126.4 3.0 84 8-92 543-628 (889)
110 PF14580 LRR_9: Leucine-rich r 98.9 3.3E-09 7.2E-14 97.3 6.5 127 116-253 16-148 (175)
111 cd05617 STKc_aPKC_zeta Catalyt 98.9 4.6E-09 1E-13 109.4 8.5 34 576-609 165-198 (327)
112 cd05571 STKc_PKB Catalytic dom 98.9 3.3E-09 7.2E-14 110.3 7.4 33 576-608 164-196 (323)
113 cd05618 STKc_aPKC_iota Catalyt 98.9 4.9E-09 1.1E-13 109.3 8.7 34 576-609 165-198 (329)
114 cd05034 PTKc_Src_like Catalyti 98.9 3.6E-09 7.8E-14 106.4 7.3 50 525-575 6-55 (261)
115 KOG2052 Activin A type IB rece 98.9 1.1E-08 2.4E-13 103.0 10.3 42 530-575 216-257 (513)
116 cd05624 STKc_MRCK_beta Catalyt 98.9 4.6E-09 9.9E-14 109.6 8.2 50 526-575 2-55 (331)
117 cd05619 STKc_nPKC_theta Cataly 98.9 4E-09 8.7E-14 109.3 7.7 34 576-609 165-198 (316)
118 cd05110 PTKc_HER4 Catalytic do 98.9 3.4E-09 7.4E-14 109.2 7.1 82 576-676 180-272 (303)
119 cd05573 STKc_ROCK_NDR_like Cat 98.9 4.8E-09 1.1E-13 110.5 8.4 50 526-575 2-55 (350)
120 cd05058 PTKc_Met_Ron Catalytic 98.9 9.2E-09 2E-13 103.4 10.1 32 576-607 171-202 (262)
121 KOG0598 Ribosomal protein S6 k 98.9 3E-09 6.6E-14 105.0 6.2 47 576-627 194-240 (357)
122 cd05084 PTKc_Fes Catalytic dom 98.9 2.8E-09 6.2E-14 106.5 6.2 44 532-575 2-47 (252)
123 cd05593 STKc_PKB_gamma Catalyt 98.9 5.2E-09 1.1E-13 109.0 8.3 33 576-608 164-196 (328)
124 cd05065 PTKc_EphR_B Catalytic 98.9 8.2E-09 1.8E-13 104.3 9.5 49 527-575 6-59 (269)
125 cd06637 STKc_TNIK Catalytic do 98.9 3E-09 6.5E-14 107.7 6.3 54 521-575 2-56 (272)
126 cd06612 STKc_MST1_2 Catalytic 98.9 3E-09 6.5E-14 106.5 6.2 49 525-575 3-52 (256)
127 cd05599 STKc_NDR_like Catalyti 98.9 5.5E-09 1.2E-13 110.7 8.5 51 525-575 1-55 (364)
128 cd05590 STKc_nPKC_eta Catalyti 98.9 5.3E-09 1.2E-13 108.6 8.2 34 576-609 165-198 (320)
129 cd05588 STKc_aPKC Catalytic do 98.9 6.3E-09 1.4E-13 108.5 8.7 34 576-609 165-198 (329)
130 cd05605 STKc_GRK4_like Catalyt 98.8 5.4E-09 1.2E-13 106.6 7.9 34 576-609 170-203 (285)
131 cd05045 PTKc_RET Catalytic dom 98.8 4.1E-09 8.9E-14 107.8 7.0 34 576-609 198-232 (290)
132 cd05073 PTKc_Hck Catalytic dom 98.8 6.3E-09 1.4E-13 104.6 8.2 49 526-575 7-55 (260)
133 cd05623 STKc_MRCK_alpha Cataly 98.8 6.5E-09 1.4E-13 108.6 8.6 50 526-575 2-55 (332)
134 cd05632 STKc_GRK5 Catalytic do 98.8 5.7E-09 1.2E-13 106.5 7.9 34 576-609 170-203 (285)
135 cd05596 STKc_ROCK Catalytic do 98.8 5.3E-09 1.1E-13 110.9 7.8 54 522-575 40-97 (370)
136 cd05116 PTKc_Syk Catalytic dom 98.8 4E-09 8.8E-14 105.8 6.6 44 532-575 2-50 (257)
137 cd05059 PTKc_Tec_like Catalyti 98.8 4.3E-09 9.4E-14 105.5 6.7 48 527-575 6-53 (256)
138 cd05622 STKc_ROCK1 Catalytic d 98.8 6.4E-09 1.4E-13 110.2 8.2 60 516-575 34-97 (371)
139 cd05079 PTKc_Jak1_rpt2 Catalyt 98.8 4.3E-09 9.4E-14 107.3 6.7 49 527-575 6-60 (284)
140 cd06609 STKc_MST3_like Catalyt 98.8 4.6E-09 9.9E-14 106.5 6.9 49 527-575 3-53 (274)
141 cd05570 STKc_PKC Catalytic dom 98.8 5.4E-09 1.2E-13 108.4 7.5 34 576-609 165-198 (318)
142 cd05104 PTKc_Kit Catalytic dom 98.8 1.2E-08 2.6E-13 108.4 10.2 34 576-609 285-319 (375)
143 cd05053 PTKc_FGFR Catalytic do 98.8 6.6E-09 1.4E-13 106.5 8.0 33 576-608 203-236 (293)
144 cd07853 STKc_NLK Catalytic dom 98.8 5.5E-09 1.2E-13 111.0 7.6 50 526-575 1-53 (372)
145 cd05620 STKc_nPKC_delta Cataly 98.8 6.3E-09 1.4E-13 107.8 7.8 34 576-609 165-198 (316)
146 cd08529 STKc_FA2-like Catalyti 98.8 7E-09 1.5E-13 103.9 7.9 49 527-575 2-53 (256)
147 cd07862 STKc_CDK6 Catalytic do 98.8 7.5E-09 1.6E-13 105.9 8.3 34 576-609 178-211 (290)
148 cd05115 PTKc_Zap-70 Catalytic 98.8 5.3E-09 1.1E-13 105.0 7.0 34 576-609 167-201 (257)
149 cd05575 STKc_SGK Catalytic dom 98.8 6.3E-09 1.4E-13 108.3 7.8 33 576-608 165-197 (323)
150 cd05082 PTKc_Csk Catalytic dom 98.8 1.6E-08 3.5E-13 101.3 10.5 33 576-608 168-201 (256)
151 cd05074 PTKc_Tyro3 Catalytic d 98.8 1.3E-08 2.9E-13 103.0 9.8 33 576-608 184-217 (273)
152 cd07879 STKc_p38delta_MAPK13 C 98.8 6E-09 1.3E-13 109.3 7.4 44 516-559 2-50 (342)
153 cd05051 PTKc_DDR Catalytic dom 98.8 1.8E-08 3.9E-13 103.4 10.8 33 576-608 201-235 (296)
154 cd05597 STKc_DMPK_like Catalyt 98.8 8.6E-09 1.9E-13 107.6 8.5 50 526-575 2-55 (331)
155 cd06654 STKc_PAK1 Catalytic do 98.8 7.1E-09 1.5E-13 106.4 7.7 50 526-575 21-71 (296)
156 cd06651 STKc_MEKK3 Catalytic d 98.8 8.8E-09 1.9E-13 103.9 8.3 51 525-575 2-58 (266)
157 KOG0694 Serine/threonine prote 98.8 5.2E-09 1.1E-13 111.0 6.6 53 523-575 366-422 (694)
158 cd05589 STKc_PKN Catalytic dom 98.8 8.1E-09 1.8E-13 107.5 8.1 34 576-609 170-203 (324)
159 cd05041 PTKc_Fes_like Catalyti 98.8 7.3E-09 1.6E-13 103.4 7.4 44 532-575 2-46 (251)
160 cd05628 STKc_NDR1 Catalytic do 98.8 7.5E-09 1.6E-13 109.5 7.8 51 525-575 1-55 (363)
161 cd05601 STKc_CRIK Catalytic do 98.8 4.3E-09 9.3E-14 109.9 5.9 50 526-575 2-55 (330)
162 cd05050 PTKc_Musk Catalytic do 98.8 1E-08 2.2E-13 104.8 8.5 33 576-608 201-234 (288)
163 cd05090 PTKc_Ror1 Catalytic do 98.8 6.5E-09 1.4E-13 105.9 7.0 33 576-608 195-228 (283)
164 cd05056 PTKc_FAK Catalytic dom 98.8 1.9E-08 4E-13 101.7 10.3 49 527-575 8-61 (270)
165 cd05630 STKc_GRK6 Catalytic do 98.8 9.1E-09 2E-13 105.0 8.0 34 576-609 170-203 (285)
166 cd05608 STKc_GRK1 Catalytic do 98.8 6.7E-09 1.4E-13 105.7 6.7 34 576-609 166-199 (280)
167 cd06619 PKc_MKK5 Catalytic dom 98.8 8.6E-09 1.9E-13 104.8 7.5 85 527-611 3-197 (279)
168 KOG0591 NIMA (never in mitosis 98.8 1.5E-09 3.1E-14 102.8 1.6 33 576-608 197-229 (375)
169 cd05054 PTKc_VEGFR Catalytic d 98.8 1.1E-08 2.3E-13 107.1 8.3 34 576-609 244-278 (337)
170 cd05604 STKc_SGK3 Catalytic do 98.8 6.9E-09 1.5E-13 108.1 6.8 33 576-608 165-197 (325)
171 cd05095 PTKc_DDR2 Catalytic do 98.8 1.5E-08 3.2E-13 104.0 9.2 33 576-608 201-235 (296)
172 cd05055 PTKc_PDGFR Catalytic d 98.8 6.3E-09 1.4E-13 107.1 6.4 34 576-609 212-246 (302)
173 cd05097 PTKc_DDR_like Catalyti 98.8 1.4E-08 3E-13 104.2 8.9 33 576-608 200-234 (295)
174 cd05626 STKc_LATS2 Catalytic d 98.8 1.2E-08 2.5E-13 108.8 8.5 50 526-575 2-55 (381)
175 PF13855 LRR_8: Leucine rich r 98.8 4E-09 8.6E-14 79.4 3.5 61 10-70 1-61 (61)
176 cd06614 STKc_PAK Catalytic dom 98.8 8.8E-09 1.9E-13 105.1 7.3 53 522-575 16-69 (286)
177 cd05106 PTKc_CSF-1R Catalytic 98.8 1.9E-08 4.1E-13 106.8 10.0 34 576-609 283-317 (374)
178 KOG0667 Dual-specificity tyros 98.8 9.4E-09 2E-13 108.9 7.5 31 576-607 357-387 (586)
179 cd05062 PTKc_IGF-1R Catalytic 98.8 5.6E-09 1.2E-13 106.0 5.7 53 523-575 4-63 (277)
180 cd05614 STKc_MSK2_N N-terminal 98.8 1.1E-08 2.3E-13 107.0 7.9 34 576-609 175-209 (332)
181 cd06650 PKc_MEK1 Catalytic dom 98.8 7.7E-09 1.7E-13 108.0 6.8 51 525-575 5-57 (333)
182 cd06652 STKc_MEKK2 Catalytic d 98.8 1.1E-08 2.3E-13 103.2 7.6 51 525-575 2-58 (265)
183 cd06646 STKc_MAP4K5 Catalytic 98.8 1E-08 2.2E-13 103.5 7.5 50 526-575 10-60 (267)
184 cd07869 STKc_PFTAIRE1 Catalyti 98.8 8.2E-09 1.8E-13 106.4 6.9 52 524-575 4-57 (303)
185 cd06631 STKc_YSK4 Catalytic do 98.8 1.2E-08 2.5E-13 102.9 7.9 49 527-575 2-56 (265)
186 cd05040 PTKc_Ack_like Catalyti 98.8 1.8E-08 4E-13 101.0 9.2 34 576-609 169-203 (257)
187 cd06639 STKc_myosinIIIB Cataly 98.8 1.2E-08 2.5E-13 104.5 7.9 46 514-559 11-57 (291)
188 cd06655 STKc_PAK2 Catalytic do 98.8 8.4E-09 1.8E-13 105.9 6.8 50 526-575 20-70 (296)
189 cd05047 PTKc_Tie Catalytic dom 98.8 1.1E-08 2.4E-13 103.4 7.6 33 576-608 180-213 (270)
190 cd06659 STKc_PAK6 Catalytic do 98.8 7.5E-09 1.6E-13 106.3 6.4 45 531-575 27-72 (297)
191 cd05088 PTKc_Tie2 Catalytic do 98.8 1.5E-08 3.3E-13 104.3 8.7 33 576-608 192-225 (303)
192 cd05607 STKc_GRK7 Catalytic do 98.8 1E-08 2.2E-13 104.2 7.1 34 576-609 163-196 (277)
193 KOG0593 Predicted protein kina 98.8 1.1E-08 2.4E-13 97.9 6.8 45 531-575 8-55 (396)
194 cd05603 STKc_SGK2 Catalytic do 98.8 1.2E-08 2.6E-13 106.1 7.8 33 576-608 165-197 (321)
195 cd06647 STKc_PAK_I Catalytic d 98.8 1.3E-08 2.7E-13 104.4 7.6 50 526-575 20-70 (293)
196 cd06610 STKc_OSR1_SPAK Catalyt 98.8 1.6E-08 3.4E-13 101.9 8.3 50 526-575 2-53 (267)
197 cd05621 STKc_ROCK2 Catalytic d 98.8 1.4E-08 3E-13 107.5 8.2 57 519-575 37-97 (370)
198 PLN00034 mitogen-activated pro 98.8 7.4E-09 1.6E-13 109.1 6.1 46 530-575 79-126 (353)
199 cd06621 PKc_MAPKK_Pek1_like Ca 98.8 4.5E-08 9.8E-13 99.9 11.5 50 526-575 2-53 (287)
200 cd06656 STKc_PAK3 Catalytic do 98.8 1.2E-08 2.7E-13 104.7 7.4 50 526-575 20-70 (297)
201 cd05069 PTKc_Yes Catalytic dom 98.8 1.2E-08 2.6E-13 102.5 7.2 48 527-575 8-55 (260)
202 cd07871 STKc_PCTAIRE3 Catalyti 98.8 1.1E-08 2.3E-13 104.7 6.8 50 526-575 6-57 (288)
203 cd06642 STKc_STK25-YSK1 Cataly 98.8 5.7E-09 1.2E-13 106.0 4.8 34 576-609 170-203 (277)
204 cd07875 STKc_JNK1 Catalytic do 98.8 1.2E-08 2.6E-13 108.1 7.4 33 576-608 194-226 (364)
205 cd07859 STKc_TDY_MAPK_plant Ca 98.8 9.7E-09 2.1E-13 107.6 6.6 48 528-575 3-53 (338)
206 cd06607 STKc_TAO Catalytic dom 98.8 1.5E-08 3.2E-13 104.7 7.8 51 525-575 15-69 (307)
207 cd05092 PTKc_TrkA Catalytic do 98.8 8.6E-09 1.9E-13 104.9 5.9 33 576-608 193-226 (280)
208 cd07846 STKc_CDKL2_3 Catalytic 98.8 1E-08 2.3E-13 104.5 6.6 50 526-575 2-54 (286)
209 KOG0531 Protein phosphatase 1, 98.8 6.8E-10 1.5E-14 119.1 -2.3 242 32-307 70-319 (414)
210 cd05066 PTKc_EphR_A Catalytic 98.8 2.7E-08 5.8E-13 100.4 9.4 50 526-575 5-59 (267)
211 cd06632 STKc_MEKK1_plant Catal 98.8 1.6E-08 3.6E-13 101.3 7.7 49 527-575 2-56 (258)
212 cd05091 PTKc_Ror2 Catalytic do 98.8 2.5E-08 5.3E-13 101.7 9.0 33 576-608 195-228 (283)
213 cd06605 PKc_MAPKK Catalytic do 98.8 2.1E-08 4.6E-13 101.0 8.4 50 526-575 2-53 (265)
214 cd06640 STKc_MST4 Catalytic do 98.8 1E-08 2.3E-13 104.1 6.2 34 576-609 170-203 (277)
215 cd07872 STKc_PCTAIRE2 Catalyti 98.7 1.1E-08 2.4E-13 105.8 6.4 50 526-575 7-58 (309)
216 cd06648 STKc_PAK_II Catalytic 98.7 1.8E-08 3.8E-13 102.9 7.7 49 527-575 21-70 (285)
217 cd07876 STKc_JNK2 Catalytic do 98.7 1.6E-08 3.5E-13 106.9 7.5 33 576-608 191-223 (359)
218 KOG1024 Receptor-like protein 98.7 6.6E-09 1.4E-13 102.7 4.1 35 576-610 467-502 (563)
219 cd07870 STKc_PFTAIRE2 Catalyti 98.7 1.3E-08 2.8E-13 104.2 6.6 53 523-575 3-57 (291)
220 KOG3653 Transforming growth fa 98.7 9.4E-09 2E-13 104.3 5.3 41 531-575 216-256 (534)
221 cd05113 PTKc_Btk_Bmx Catalytic 98.7 1E-08 2.2E-13 102.8 5.6 45 530-575 9-53 (256)
222 KOG4257 Focal adhesion tyrosin 98.7 1.9E-08 4.1E-13 105.0 7.5 46 530-575 394-445 (974)
223 KOG0575 Polo-like serine/threo 98.7 1.6E-08 3.4E-13 106.1 7.0 50 526-575 19-72 (592)
224 cd05101 PTKc_FGFR2 Catalytic d 98.7 2.4E-08 5.3E-13 102.9 8.5 33 576-608 208-241 (304)
225 cd05602 STKc_SGK1 Catalytic do 98.7 2E-08 4.3E-13 104.6 7.9 33 576-608 165-197 (325)
226 cd05627 STKc_NDR2 Catalytic do 98.7 1.3E-08 2.8E-13 107.7 6.5 50 526-575 2-55 (360)
227 cd05629 STKc_NDR_like_fungal C 98.7 2.2E-08 4.7E-13 106.6 8.2 50 526-575 2-55 (377)
228 cd05594 STKc_PKB_alpha Catalyt 98.7 1.1E-08 2.4E-13 106.6 5.7 33 576-608 165-197 (325)
229 KOG0531 Protein phosphatase 1, 98.7 1.8E-09 4E-14 115.7 -0.2 193 120-329 73-268 (414)
230 cd05057 PTKc_EGFR_like Catalyt 98.7 1.8E-08 3.8E-13 102.5 7.0 34 576-609 180-214 (279)
231 cd06653 STKc_MEKK3_like_1 Cata 98.7 2.4E-08 5.1E-13 100.6 7.8 51 525-575 2-58 (264)
232 cd07877 STKc_p38alpha_MAPK14 C 98.7 1.8E-08 3.9E-13 105.8 7.2 61 515-575 7-70 (345)
233 PRK13184 pknD serine/threonine 98.7 1.6E-08 3.4E-13 115.1 7.1 50 526-575 3-56 (932)
234 cd05083 PTKc_Chk Catalytic dom 98.7 1.3E-08 2.8E-13 101.9 5.8 46 527-575 8-53 (254)
235 cd06658 STKc_PAK5 Catalytic do 98.7 1.3E-08 2.9E-13 104.2 6.0 45 531-575 28-73 (292)
236 KOG1006 Mitogen-activated prot 98.7 3.2E-09 7E-14 99.7 1.2 56 513-575 59-116 (361)
237 cd05122 PKc_STE Catalytic doma 98.7 2.5E-08 5.5E-13 99.3 7.9 49 527-575 2-51 (253)
238 cd07874 STKc_JNK3 Catalytic do 98.7 1.7E-08 3.8E-13 106.5 7.0 33 576-608 187-219 (355)
239 cd05625 STKc_LATS1 Catalytic d 98.7 2.7E-08 5.9E-13 106.1 8.6 49 527-575 3-55 (382)
240 cd05582 STKc_RSK_N N-terminal 98.7 1.2E-08 2.6E-13 105.9 5.6 34 576-609 167-200 (318)
241 cd06623 PKc_MAPKK_plant_like C 98.7 2.5E-08 5.5E-13 100.3 7.7 50 526-575 2-53 (264)
242 cd08225 STKc_Nek5 Catalytic do 98.7 3.8E-08 8.3E-13 98.6 9.0 49 527-575 2-53 (257)
243 cd07878 STKc_p38beta_MAPK11 Ca 98.7 2.3E-08 5.1E-13 104.9 7.7 54 522-575 12-68 (343)
244 cd06615 PKc_MEK Catalytic doma 98.7 2.2E-08 4.7E-13 103.4 7.2 50 526-575 2-53 (308)
245 cd06626 STKc_MEKK4 Catalytic d 98.7 3E-08 6.6E-13 99.7 8.1 49 527-575 2-53 (264)
246 cd07863 STKc_CDK4 Catalytic do 98.7 2.8E-08 6.1E-13 101.5 7.9 33 576-608 176-208 (288)
247 PTZ00036 glycogen synthase kin 98.7 1.6E-08 3.4E-13 109.6 6.3 34 576-609 239-273 (440)
248 cd08218 STKc_Nek1 Catalytic do 98.7 3.3E-08 7.2E-13 99.0 8.1 33 576-608 170-202 (256)
249 cd05578 STKc_Yank1 Catalytic d 98.7 3.3E-08 7.1E-13 99.2 8.0 49 527-575 2-54 (258)
250 cd06644 STKc_STK10_LOK Catalyt 98.7 2.3E-08 4.9E-13 102.4 6.9 49 527-575 14-63 (292)
251 cd05075 PTKc_Axl Catalytic dom 98.7 2.6E-08 5.6E-13 100.8 7.2 33 576-608 183-216 (272)
252 cd06625 STKc_MEKK3_like Cataly 98.7 3.2E-08 6.9E-13 99.6 7.8 51 525-575 2-58 (263)
253 cd07860 STKc_CDK2_3 Catalytic 98.7 2E-08 4.4E-13 102.3 6.5 50 526-575 1-53 (284)
254 KOG0600 Cdc2-related protein k 98.7 1.4E-08 3E-13 103.9 5.0 45 531-575 123-170 (560)
255 cd06638 STKc_myosinIIIA Cataly 98.7 3E-08 6.6E-13 101.1 7.6 46 514-559 7-53 (286)
256 cd06613 STKc_MAP4K3_like Catal 98.7 3E-08 6.4E-13 99.7 7.5 51 525-575 3-54 (262)
257 cd00192 PTKc Catalytic domain 98.7 6.4E-08 1.4E-12 97.1 9.9 34 576-609 176-210 (262)
258 cd06641 STKc_MST3 Catalytic do 98.7 2.8E-08 6.1E-13 100.9 7.3 34 576-609 170-203 (277)
259 cd05105 PTKc_PDGFR_alpha Catal 98.7 6.7E-08 1.4E-12 103.1 10.4 34 576-609 308-342 (400)
260 cd06629 STKc_MAPKKK_Bck1_like 98.7 8.6E-08 1.9E-12 97.0 10.7 33 576-608 179-213 (272)
261 cd06657 STKc_PAK4 Catalytic do 98.7 2.5E-08 5.3E-13 102.1 6.8 45 531-575 26-71 (292)
262 cd05598 STKc_LATS Catalytic do 98.7 2.5E-08 5.5E-13 106.1 6.9 50 526-575 2-55 (376)
263 cd07833 STKc_CDKL Catalytic do 98.7 2.2E-08 4.8E-13 102.2 6.2 50 526-575 2-54 (288)
264 cd06620 PKc_MAPKK_Byr1_like Ca 98.7 2E-08 4.3E-13 102.4 5.9 35 576-610 171-205 (284)
265 cd07867 STKc_CDC2L6 Catalytic 98.7 2.4E-08 5.3E-13 103.5 6.5 33 576-608 184-217 (317)
266 cd05087 PTKc_Aatyk1_Aatyk3 Cat 98.7 1.1E-07 2.3E-12 96.2 11.1 44 532-575 2-49 (269)
267 cd05098 PTKc_FGFR1 Catalytic d 98.7 2.9E-08 6.3E-13 102.4 7.0 33 576-608 211-244 (307)
268 cd05061 PTKc_InsR Catalytic do 98.7 2.5E-08 5.4E-13 101.9 6.4 33 576-608 190-223 (288)
269 cd06643 STKc_SLK Catalytic dom 98.7 3.6E-08 7.8E-13 100.4 7.4 45 531-575 11-56 (282)
270 cd07847 STKc_CDKL1_4 Catalytic 98.7 3.4E-08 7.4E-13 100.7 7.3 50 526-575 2-54 (286)
271 cd06636 STKc_MAP4K4_6 Catalyti 98.7 4.5E-08 9.7E-13 99.7 8.1 45 515-559 6-51 (282)
272 cd06917 STKc_NAK1_like Catalyt 98.7 3.5E-08 7.6E-13 100.2 7.2 49 527-575 3-53 (277)
273 cd06606 STKc_MAPKKK Catalytic 98.7 4.4E-08 9.6E-13 98.0 7.9 49 527-575 2-53 (260)
274 cd06635 STKc_TAO1 Catalytic do 98.7 3.3E-08 7.2E-13 102.5 7.1 49 527-575 27-79 (317)
275 cd07844 STKc_PCTAIRE_like Cata 98.7 3.3E-08 7.2E-13 101.1 6.9 51 525-575 5-57 (291)
276 cd06617 PKc_MKK3_6 Catalytic d 98.7 7.1E-08 1.5E-12 98.2 9.3 35 526-560 2-37 (283)
277 PHA03212 serine/threonine kina 98.7 2.4E-08 5.3E-13 106.4 6.1 33 576-608 252-284 (391)
278 PHA02882 putative serine/threo 98.7 5.1E-08 1.1E-12 99.9 8.1 35 576-610 202-236 (294)
279 cd06645 STKc_MAP4K3 Catalytic 98.7 2.4E-08 5.1E-13 100.8 5.5 50 526-575 10-60 (267)
280 cd06616 PKc_MKK4 Catalytic dom 98.7 2.8E-08 6.1E-13 101.5 6.0 33 576-608 176-211 (288)
281 cd05086 PTKc_Aatyk2 Catalytic 98.6 9.8E-08 2.1E-12 96.4 9.6 44 532-575 2-49 (268)
282 cd07868 STKc_CDK8 Catalytic do 98.6 4E-08 8.7E-13 101.9 6.9 34 576-609 184-218 (317)
283 cd08220 STKc_Nek8 Catalytic do 98.6 5.7E-08 1.2E-12 97.2 7.8 49 527-575 2-53 (256)
284 cd07849 STKc_ERK1_2_like Catal 98.6 4.4E-08 9.4E-13 102.6 7.2 53 523-575 3-57 (336)
285 cd06611 STKc_SLK_like Catalyti 98.6 2.6E-08 5.6E-13 101.3 5.3 50 526-575 6-56 (280)
286 cd06618 PKc_MKK7 Catalytic dom 98.6 5.2E-08 1.1E-12 100.0 7.5 48 526-573 16-65 (296)
287 cd07873 STKc_PCTAIRE1 Catalyti 98.6 3.9E-08 8.4E-13 101.2 6.5 50 526-575 7-58 (301)
288 cd05103 PTKc_VEGFR2 Catalytic 98.6 9.5E-08 2.1E-12 100.3 9.5 34 576-609 250-284 (343)
289 KOG4250 TANK binding protein k 98.6 1.7E-08 3.7E-13 107.5 3.8 49 527-575 15-65 (732)
290 KOG0584 Serine/threonine prote 98.6 5.9E-09 1.3E-13 109.5 0.3 35 576-610 208-246 (632)
291 cd05032 PTKc_InsR_like Catalyt 98.6 1.2E-07 2.7E-12 96.1 10.0 33 576-608 190-223 (277)
292 PF13855 LRR_8: Leucine rich r 98.6 2.1E-08 4.6E-13 75.4 3.1 58 342-399 3-60 (61)
293 cd07856 STKc_Sty1_Hog1 Catalyt 98.6 3.8E-08 8.2E-13 102.6 6.2 58 518-575 3-63 (328)
294 cd05574 STKc_phototropin_like 98.6 5.5E-08 1.2E-12 100.9 7.3 50 526-575 2-55 (316)
295 KOG0605 NDR and related serine 98.6 4.3E-08 9.3E-13 101.3 6.2 47 576-622 357-405 (550)
296 cd05044 PTKc_c-ros Catalytic d 98.6 3E-08 6.6E-13 100.1 5.1 33 576-608 182-215 (269)
297 cd07838 STKc_CDK4_6_like Catal 98.6 7.4E-08 1.6E-12 98.3 7.9 34 576-609 175-208 (287)
298 KOG2345 Serine/threonine prote 98.6 2.7E-08 5.9E-13 92.8 4.1 42 576-617 207-251 (302)
299 KOG0658 Glycogen synthase kina 98.6 4.7E-08 1E-12 96.6 5.9 36 527-562 26-62 (364)
300 cd05099 PTKc_FGFR4 Catalytic d 98.6 6.5E-08 1.4E-12 100.2 7.4 33 576-608 205-238 (314)
301 cd07839 STKc_CDK5 Catalytic do 98.6 5.1E-08 1.1E-12 99.3 6.5 49 527-575 2-53 (284)
302 cd08223 STKc_Nek4 Catalytic do 98.6 7.6E-08 1.7E-12 96.4 7.7 33 576-608 171-203 (257)
303 KOG0663 Protein kinase PITSLRE 98.6 2.7E-08 5.8E-13 96.7 4.0 50 526-575 77-129 (419)
304 cd06630 STKc_MEKK1 Catalytic d 98.6 8.7E-08 1.9E-12 96.7 7.9 50 526-575 1-57 (268)
305 cd05580 STKc_PKA Catalytic dom 98.6 7.4E-08 1.6E-12 98.5 7.5 50 526-575 2-55 (290)
306 cd05100 PTKc_FGFR3 Catalytic d 98.6 2.3E-07 5E-12 97.0 11.4 82 576-676 205-297 (334)
307 cd05586 STKc_Sck1_like Catalyt 98.6 3.4E-08 7.4E-13 103.1 5.1 34 576-609 165-199 (330)
308 cd06628 STKc_MAPKKK_Byr2_like 98.6 9.8E-08 2.1E-12 96.2 8.2 34 576-609 181-214 (267)
309 KOG0578 p21-activated serine/t 98.6 5.8E-08 1.3E-12 101.1 6.4 82 527-608 275-470 (550)
310 cd07835 STKc_CDK1_like Catalyt 98.6 7.2E-08 1.6E-12 98.2 7.0 47 529-575 3-52 (283)
311 PTZ00267 NIMA-related protein 98.6 5.1E-08 1.1E-12 106.9 6.1 34 576-609 240-273 (478)
312 cd05046 PTK_CCK4 Pseudokinase 98.6 1.9E-07 4.1E-12 94.7 9.8 50 526-575 6-62 (275)
313 KOG0582 Ste20-like serine/thre 98.6 7.9E-08 1.7E-12 97.0 6.7 49 527-575 28-78 (516)
314 cd05042 PTKc_Aatyk Catalytic d 98.6 2.2E-07 4.7E-12 93.9 10.2 44 532-575 2-49 (269)
315 cd07861 STKc_CDK1_euk Catalyti 98.6 8.1E-08 1.8E-12 97.9 7.0 49 527-575 2-53 (285)
316 cd05633 STKc_GRK3 Catalytic do 98.6 1.3E-07 2.9E-12 96.1 8.4 35 576-610 164-199 (279)
317 cd05609 STKc_MAST Catalytic do 98.6 8.8E-08 1.9E-12 98.8 7.1 50 526-575 2-55 (305)
318 PLN00009 cyclin-dependent kina 98.6 7.8E-08 1.7E-12 98.6 6.6 51 525-575 2-55 (294)
319 KOG0198 MEKK and related serin 98.6 3.4E-08 7.3E-13 99.1 3.7 50 526-575 18-68 (313)
320 cd06622 PKc_MAPKK_PBS2_like Ca 98.6 9.7E-08 2.1E-12 97.4 7.1 47 529-575 5-53 (286)
321 cd07837 STKc_CdkB_plant Cataly 98.6 9.3E-08 2E-12 98.0 6.9 50 526-575 2-54 (295)
322 cd08227 PK_STRAD_alpha Pseudok 98.6 7.1E-08 1.5E-12 100.5 6.1 34 576-609 177-212 (327)
323 cd05577 STKc_GRK Catalytic dom 98.6 9.8E-08 2.1E-12 96.9 7.0 34 576-609 163-196 (277)
324 cd08219 STKc_Nek3 Catalytic do 98.6 8.6E-08 1.9E-12 96.0 6.5 34 576-609 169-202 (255)
325 cd05107 PTKc_PDGFR_beta Cataly 98.6 9.1E-08 2E-12 102.1 7.0 34 576-609 310-344 (401)
326 KOG0659 Cdk activating kinase 98.6 9.4E-08 2E-12 90.2 6.0 47 529-575 6-55 (318)
327 PHA03211 serine/threonine kina 98.6 6.6E-08 1.4E-12 104.6 5.8 33 576-608 331-363 (461)
328 cd06633 STKc_TAO3 Catalytic do 98.6 1.2E-07 2.7E-12 98.0 7.6 47 529-575 25-75 (313)
329 PHA03390 pk1 serine/threonine- 98.6 1.6E-07 3.4E-12 94.8 8.1 48 576-623 175-222 (267)
330 cd07836 STKc_Pho85 Catalytic d 98.6 1.1E-07 2.4E-12 96.8 7.0 50 526-575 1-52 (284)
331 cd05077 PTK_Jak1_rpt1 Pseudoki 98.5 9.8E-08 2.1E-12 96.0 6.4 33 576-608 177-211 (262)
332 PHA03207 serine/threonine kina 98.5 8.1E-08 1.8E-12 102.7 6.1 34 576-609 256-289 (392)
333 cd05606 STKc_beta_ARK Catalyti 98.5 1.3E-07 2.9E-12 96.0 7.3 35 576-610 164-199 (278)
334 cd07854 STKc_MAPK4_6 Catalytic 98.5 1.4E-07 3E-12 99.0 7.6 49 525-573 5-54 (342)
335 cd05613 STKc_MSK1_N N-terminal 98.5 1.4E-07 3E-12 96.5 7.4 49 527-575 2-58 (290)
336 cd07850 STKc_JNK Catalytic dom 98.5 1.4E-07 3.1E-12 99.4 7.4 33 576-608 186-218 (353)
337 KOG0580 Serine/threonine prote 98.5 4E-08 8.7E-13 91.2 2.8 35 576-610 191-225 (281)
338 cd06634 STKc_TAO2 Catalytic do 98.5 1E-07 2.2E-12 98.4 6.1 49 527-575 17-69 (308)
339 cd07840 STKc_CDK9_like Catalyt 98.5 1.3E-07 2.8E-12 96.4 6.7 46 530-575 4-52 (287)
340 cd05611 STKc_Rim15_like Cataly 98.5 1.5E-07 3.1E-12 94.6 7.0 34 576-609 162-195 (260)
341 KOG0574 STE20-like serine/thre 98.5 1E-08 2.3E-13 97.7 -1.3 34 576-609 198-231 (502)
342 cd05579 STKc_MAST_like Catalyt 98.5 1.6E-07 3.5E-12 94.3 7.3 34 576-609 170-203 (265)
343 cd07855 STKc_ERK5 Catalytic do 98.5 1.8E-07 4E-12 97.8 7.9 51 525-575 5-58 (334)
344 cd06627 STKc_Cdc7_like Catalyt 98.5 2.1E-07 4.6E-12 92.8 8.0 49 527-575 2-53 (254)
345 cd05076 PTK_Tyk2_rpt1 Pseudoki 98.5 6.6E-08 1.4E-12 98.0 4.3 34 576-609 189-224 (274)
346 cd08221 STKc_Nek9 Catalytic do 98.5 2.1E-07 4.5E-12 93.2 7.8 49 527-575 2-53 (256)
347 cd07845 STKc_CDK10 Catalytic d 98.5 1.3E-07 2.8E-12 97.8 6.4 36 524-559 6-42 (309)
348 cd07829 STKc_CDK_like Catalyti 98.5 1.5E-07 3.2E-12 95.8 6.8 33 576-608 167-200 (282)
349 PHA03209 serine/threonine kina 98.5 9E-08 1.9E-12 101.0 5.2 32 576-607 225-256 (357)
350 PF00069 Pkinase: Protein kina 98.5 1.5E-07 3.2E-12 94.4 6.4 35 576-610 167-202 (260)
351 cd07880 STKc_p38gamma_MAPK12 C 98.5 1.8E-07 3.9E-12 98.2 7.0 56 520-575 10-68 (343)
352 cd08217 STKc_Nek2 Catalytic do 98.5 2.1E-07 4.5E-12 93.6 7.2 34 576-609 179-212 (265)
353 cd05572 STKc_cGK_PKG Catalytic 98.5 2.4E-07 5.3E-12 93.1 7.7 34 576-609 161-194 (262)
354 cd06608 STKc_myosinIII_like Ca 98.5 2.5E-07 5.5E-12 93.6 7.6 39 521-559 2-41 (275)
355 cd08530 STKc_CNK2-like Catalyt 98.5 2.5E-07 5.3E-12 92.6 7.4 34 576-609 170-203 (256)
356 cd08215 STKc_Nek Catalytic dom 98.5 2.8E-07 6.2E-12 92.1 7.8 49 527-575 2-53 (258)
357 cd07866 STKc_BUR1 Catalytic do 98.5 2.1E-07 4.5E-12 96.2 6.9 36 524-559 7-43 (311)
358 smart00219 TyrKc Tyrosine kina 98.5 2.7E-07 5.8E-12 92.4 7.3 46 530-575 4-55 (258)
359 cd07841 STKc_CDK7 Catalytic do 98.5 2.4E-07 5.1E-12 95.2 6.9 49 527-575 2-56 (298)
360 cd07864 STKc_CDK12 Catalytic d 98.5 2.5E-07 5.5E-12 95.2 7.2 37 523-559 5-42 (302)
361 cd07832 STKc_CCRK Catalytic do 98.5 2.4E-07 5.2E-12 94.4 6.9 48 528-575 3-53 (286)
362 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.5 5.6E-08 1.2E-12 97.5 2.1 44 532-575 2-53 (258)
363 KOG0200 Fibroblast/platelet-de 98.5 2.1E-07 4.4E-12 104.5 6.6 34 576-609 490-524 (609)
364 KOG0983 Mitogen-activated prot 98.5 1.9E-07 4.1E-12 88.3 5.2 28 582-609 269-296 (391)
365 cd05583 STKc_MSK_N N-terminal 98.5 2.7E-07 5.8E-12 94.3 7.0 49 527-575 2-58 (288)
366 cd07858 STKc_TEY_MAPK_plant Ca 98.5 3.3E-07 7.1E-12 96.0 7.7 52 524-575 4-58 (337)
367 cd07865 STKc_CDK9 Catalytic do 98.5 3E-07 6.4E-12 95.0 7.2 35 525-559 12-47 (310)
368 KOG0984 Mitogen-activated prot 98.4 1.5E-07 3.1E-12 85.5 4.0 28 583-610 228-255 (282)
369 cd07830 STKc_MAK_like Catalyti 98.4 4E-07 8.6E-12 92.7 7.7 33 576-608 167-200 (283)
370 cd07843 STKc_CDC2L1 Catalytic 98.4 2.4E-07 5.2E-12 94.9 6.0 51 525-575 5-58 (293)
371 cd05118 STKc_CMGC Catalytic do 98.4 3.4E-07 7.3E-12 93.2 6.9 46 530-575 4-52 (283)
372 cd07851 STKc_p38 Catalytic dom 98.4 2.8E-07 6E-12 96.8 6.4 38 522-559 12-50 (343)
373 smart00221 STYKc Protein kinas 98.4 4.6E-07 1E-11 88.5 7.4 48 528-575 2-51 (225)
374 cd07834 STKc_MAPK Catalytic do 98.4 4.2E-07 9.2E-12 94.8 7.5 49 527-575 2-53 (330)
375 PLN03224 probable serine/threo 98.4 4.6E-07 1E-11 98.1 7.7 37 523-559 143-196 (507)
376 cd07842 STKc_CDK8_like Catalyt 98.4 4.4E-07 9.5E-12 94.0 7.2 35 576-610 184-219 (316)
377 cd05037 PTK_Jak_rpt1 Pseudokin 98.4 3E-07 6.5E-12 92.2 5.5 33 576-608 173-208 (259)
378 cd05581 STKc_PDK1 Catalytic do 98.4 5.2E-07 1.1E-11 91.5 7.3 50 526-575 2-55 (280)
379 PTZ00266 NIMA-related protein 98.4 3.4E-07 7.4E-12 104.9 6.3 52 524-575 12-66 (1021)
380 cd07831 STKc_MOK Catalytic dom 98.4 4.9E-07 1.1E-11 91.9 7.0 34 576-609 167-201 (282)
381 cd05123 STKc_AGC Catalytic dom 98.4 5.7E-07 1.2E-11 89.6 7.2 34 576-609 162-195 (250)
382 cd07852 STKc_MAPK15 Catalytic 98.4 3E-07 6.5E-12 96.3 5.3 35 524-558 6-41 (337)
383 KOG0583 Serine/threonine prote 98.4 6.5E-07 1.4E-11 93.6 7.5 34 576-609 190-225 (370)
384 KOG0577 Serine/threonine prote 98.4 4E-07 8.6E-12 94.8 5.6 49 527-575 28-80 (948)
385 KOG1859 Leucine-rich repeat pr 98.4 1.1E-08 2.4E-13 108.6 -5.9 181 238-426 102-293 (1096)
386 PTZ00024 cyclin-dependent prot 98.4 4.5E-07 9.7E-12 94.9 6.0 29 531-559 15-44 (335)
387 KOG0660 Mitogen-activated prot 98.3 3.9E-07 8.5E-12 90.0 4.4 53 523-575 20-75 (359)
388 KOG2120 SCF ubiquitin ligase, 98.3 9E-09 2E-13 98.3 -7.2 174 223-398 187-373 (419)
389 KOG0596 Dual specificity; seri 98.3 5.5E-07 1.2E-11 93.4 5.1 47 529-575 365-413 (677)
390 KOG4236 Serine/threonine prote 98.3 3.4E-07 7.4E-12 94.0 3.4 48 527-575 567-617 (888)
391 cd08226 PK_STRAD_beta Pseudoki 98.3 9.8E-07 2.1E-11 92.0 6.9 34 576-609 177-212 (328)
392 KOG0592 3-phosphoinositide-dep 98.3 4.3E-07 9.3E-12 94.1 3.8 33 576-608 256-288 (604)
393 cd07857 STKc_MPK1 Catalytic do 98.3 1E-06 2.2E-11 92.1 6.5 34 576-609 178-212 (332)
394 KOG0607 MAP kinase-interacting 98.3 8.6E-07 1.9E-11 85.8 5.1 55 516-575 74-129 (463)
395 KOG0579 Ste20-like serine/thre 98.2 1.8E-07 3.9E-12 98.0 -0.3 43 533-575 40-83 (1187)
396 KOG0616 cAMP-dependent protein 98.2 1E-06 2.2E-11 84.6 4.6 34 576-609 210-243 (355)
397 KOG2120 SCF ubiquitin ligase, 98.2 3.3E-08 7.1E-13 94.5 -5.5 176 197-374 185-373 (419)
398 KOG1989 ARK protein kinase fam 98.2 1.6E-06 3.4E-11 95.4 6.5 46 530-575 42-88 (738)
399 KOG1035 eIF-2alpha kinase GCN2 98.2 1.2E-06 2.7E-11 98.8 5.6 51 525-575 479-531 (1351)
400 smart00220 S_TKc Serine/Threon 98.2 2.1E-06 4.6E-11 84.7 6.8 34 576-609 155-188 (244)
401 PHA03210 serine/threonine kina 98.2 5.4E-07 1.2E-11 99.3 2.6 31 576-606 337-367 (501)
402 KOG0986 G protein-coupled rece 98.2 3.6E-07 7.8E-12 92.4 1.1 33 576-608 355-387 (591)
403 cd08216 PK_STRAD Pseudokinase 98.2 1.9E-06 4.1E-11 89.2 6.5 34 576-609 177-212 (314)
404 KOG1859 Leucine-rich repeat pr 98.2 3.2E-08 7E-13 105.2 -6.9 124 198-328 165-291 (1096)
405 KOG0615 Serine/threonine prote 98.2 1.4E-06 2.9E-11 87.5 4.7 46 530-575 177-230 (475)
406 smart00750 KIND kinase non-cat 98.2 2.1E-06 4.6E-11 80.4 5.8 34 576-609 73-106 (176)
407 cd08222 STKc_Nek11 Catalytic d 98.2 2.5E-06 5.5E-11 85.6 6.7 33 576-608 174-206 (260)
408 PLN03225 Serine/threonine-prot 98.2 5.1E-06 1.1E-10 92.3 9.6 36 523-558 130-170 (566)
409 KOG4279 Serine/threonine prote 98.2 8.4E-07 1.8E-11 94.1 3.1 35 576-610 745-781 (1226)
410 KOG0661 MAPK related serine/th 98.2 6.8E-07 1.5E-11 91.1 2.1 30 576-605 178-208 (538)
411 KOG0696 Serine/threonine prote 98.2 7.6E-07 1.6E-11 88.9 2.0 35 576-610 519-553 (683)
412 KOG2982 Uncharacterized conser 98.2 3.7E-07 7.9E-12 87.5 -0.2 189 118-332 70-265 (418)
413 KOG0594 Protein kinase PCTAIRE 98.1 2.4E-06 5.2E-11 84.6 4.5 31 576-606 189-220 (323)
414 KOG0032 Ca2+/calmodulin-depend 98.1 4.5E-06 9.8E-11 87.3 6.7 46 530-575 40-89 (382)
415 KOG4579 Leucine-rich repeat (L 98.1 1.4E-07 3E-12 80.0 -3.8 104 223-329 29-136 (177)
416 COG5238 RNA1 Ran GTPase-activa 98.1 3.8E-07 8.2E-12 86.2 -1.4 255 32-308 28-318 (388)
417 KOG4645 MAPKKK (MAP kinase kin 98.1 7.6E-07 1.6E-11 101.1 0.2 39 521-559 1231-1270(1509)
418 KOG4579 Leucine-rich repeat (L 98.1 2.8E-07 6.1E-12 78.1 -2.7 89 220-310 52-140 (177)
419 KOG2982 Uncharacterized conser 98.1 1.7E-06 3.6E-11 83.1 2.0 187 220-426 70-263 (418)
420 KOG4717 Serine/threonine prote 98.0 4.1E-06 8.9E-11 86.0 3.8 35 576-610 187-222 (864)
421 KOG0588 Serine/threonine prote 98.0 6.4E-06 1.4E-10 87.6 5.3 34 576-609 180-214 (786)
422 COG5238 RNA1 Ran GTPase-activa 98.0 4E-07 8.7E-12 86.1 -3.3 43 216-258 87-133 (388)
423 KOG0664 Nemo-like MAPK-related 98.0 5.3E-06 1.2E-10 78.5 3.7 47 529-575 57-106 (449)
424 KOG0671 LAMMER dual specificit 98.0 1.3E-06 2.9E-11 86.7 -0.4 33 576-608 278-310 (415)
425 KOG0610 Putative serine/threon 97.9 1.5E-05 3.3E-10 80.2 6.2 34 576-609 304-337 (459)
426 PRK15386 type III secretion pr 97.9 5.5E-05 1.2E-09 78.3 9.9 56 218-279 49-104 (426)
427 KOG1151 Tousled-like protein k 97.9 4.3E-06 9.3E-11 84.3 1.8 34 576-609 649-686 (775)
428 cd05576 STKc_RPK118_like Catal 97.9 1.4E-05 3.1E-10 78.9 5.0 33 576-608 151-183 (237)
429 KOG0611 Predicted serine/threo 97.8 2E-05 4.4E-10 78.7 5.1 45 531-575 59-107 (668)
430 KOG0612 Rho-associated, coiled 97.8 1E-05 2.3E-10 90.9 2.5 59 517-575 67-129 (1317)
431 KOG0586 Serine/threonine prote 97.8 3.6E-05 7.7E-10 81.5 5.9 53 523-575 54-109 (596)
432 KOG0603 Ribosomal protein S6 k 97.7 1.3E-05 2.9E-10 85.1 2.1 35 576-610 482-516 (612)
433 PF12799 LRR_4: Leucine Rich r 97.7 2.6E-05 5.7E-10 53.6 2.6 36 11-47 2-37 (44)
434 KOG0589 Serine/threonine prote 97.7 3.7E-05 8E-10 79.8 4.8 34 576-609 175-208 (426)
435 PF12799 LRR_4: Leucine Rich r 97.7 2.6E-05 5.5E-10 53.7 2.4 37 34-71 1-37 (44)
436 KOG1167 Serine/threonine prote 97.7 2.9E-05 6.3E-10 78.5 3.6 53 521-575 32-88 (418)
437 KOG0690 Serine/threonine prote 97.7 3.2E-05 7E-10 75.2 3.7 34 576-609 337-370 (516)
438 KOG0695 Serine/threonine prote 97.7 3.5E-05 7.7E-10 75.1 3.6 50 576-625 420-471 (593)
439 PRK15386 type III secretion pr 97.6 0.00016 3.6E-09 74.8 8.5 52 198-255 53-104 (426)
440 KOG0668 Casein kinase II, alph 97.6 2.7E-05 5.8E-10 72.1 2.3 47 526-575 39-86 (338)
441 KOG0662 Cyclin-dependent kinas 97.6 9E-05 2E-09 65.9 5.4 47 528-574 5-54 (292)
442 KOG3665 ZYG-1-like serine/thre 97.6 1.2E-05 2.6E-10 90.2 -0.3 128 58-187 122-265 (699)
443 KOG1644 U2-associated snRNP A' 97.6 8.6E-05 1.9E-09 67.8 5.0 82 246-329 43-126 (233)
444 KOG0585 Ca2+/calmodulin-depend 97.5 0.00017 3.6E-09 74.1 6.5 54 522-575 94-162 (576)
445 KOG0666 Cyclin C-dependent kin 97.5 5.1E-05 1.1E-09 73.6 1.8 29 576-604 208-237 (438)
446 KOG1644 U2-associated snRNP A' 97.4 0.00024 5.2E-09 64.9 5.3 95 35-131 43-152 (233)
447 KOG0033 Ca2+/calmodulin-depend 97.4 8.6E-06 1.9E-10 76.1 -4.3 34 576-609 181-214 (355)
448 KOG0670 U4/U6-associated splic 97.3 0.00011 2.4E-09 76.1 2.7 32 576-607 604-635 (752)
449 KOG1027 Serine/threonine prote 97.3 2.6E-05 5.7E-10 85.1 -1.9 35 576-610 683-718 (903)
450 KOG0587 Traf2- and Nck-interac 97.2 0.00036 7.7E-09 77.0 5.4 59 516-575 10-69 (953)
451 KOG0608 Warts/lats-like serine 97.2 0.00015 3.3E-09 76.7 2.2 45 576-620 840-886 (1034)
452 cd00180 PKc Catalytic domain o 97.1 0.00083 1.8E-08 64.2 6.4 43 533-575 1-45 (215)
453 KOG3665 ZYG-1-like serine/thre 97.1 0.00025 5.5E-09 79.8 2.9 118 188-307 139-264 (699)
454 KOG0614 cGMP-dependent protein 96.9 0.00053 1.2E-08 71.0 3.0 32 577-608 589-620 (732)
455 PF13306 LRR_5: Leucine rich r 96.9 0.0022 4.7E-08 56.4 6.3 8 365-372 104-111 (129)
456 PF13306 LRR_5: Leucine rich r 96.9 0.0031 6.8E-08 55.4 7.1 104 240-348 7-111 (129)
457 KOG2739 Leucine-rich acidic nu 96.8 0.00065 1.4E-08 64.9 2.1 108 7-128 40-152 (260)
458 cd05147 RIO1_euk RIO kinase fa 96.7 0.00099 2.1E-08 63.0 2.6 30 531-560 3-32 (190)
459 KOG1345 Serine/threonine kinas 96.6 0.0049 1.1E-07 59.1 6.6 45 527-572 26-71 (378)
460 KOG0669 Cyclin T-dependent kin 96.6 0.00022 4.7E-09 67.3 -2.6 33 576-608 197-230 (376)
461 KOG2739 Leucine-rich acidic nu 96.6 0.0012 2.5E-08 63.2 2.2 65 338-402 63-130 (260)
462 cd05610 STKc_MASTL Catalytic d 96.5 0.00087 1.9E-08 76.6 1.3 34 576-609 549-582 (669)
463 KOG2123 Uncharacterized conser 96.5 0.00012 2.6E-09 70.0 -4.9 81 8-92 17-98 (388)
464 KOG4341 F-box protein containi 96.5 0.00016 3.4E-09 73.2 -4.6 277 144-423 139-437 (483)
465 PLN00181 protein SPA1-RELATED; 96.4 0.0012 2.7E-08 77.4 1.5 33 576-608 184-216 (793)
466 KOG4341 F-box protein containi 96.3 0.00018 4E-09 72.7 -5.1 134 218-351 291-437 (483)
467 PF14531 Kinase-like: Kinase-l 96.3 0.0035 7.7E-08 62.5 3.9 44 529-572 16-63 (288)
468 PRK09188 serine/threonine prot 96.3 0.0063 1.4E-07 63.4 5.9 63 522-584 15-84 (365)
469 cd05145 RIO1_like RIO kinase f 96.2 0.0048 1E-07 58.4 4.3 30 531-560 3-32 (190)
470 KOG2123 Uncharacterized conser 96.2 0.00026 5.7E-09 67.7 -4.6 99 244-346 18-123 (388)
471 KOG0195 Integrin-linked kinase 96.1 0.0011 2.3E-08 63.2 -1.1 34 576-609 355-391 (448)
472 KOG1290 Serine/threonine prote 96.0 0.0044 9.6E-08 64.2 2.9 64 549-612 388-456 (590)
473 PRK10359 lipopolysaccharide co 95.9 0.008 1.7E-07 58.0 4.0 51 524-575 30-89 (232)
474 KOG0604 MAP kinase-activated p 95.8 0.003 6.5E-08 61.4 0.6 35 576-610 232-266 (400)
475 KOG0665 Jun-N-terminal kinase 95.8 0.015 3.4E-07 57.2 5.3 43 576-622 186-228 (369)
476 KOG0599 Phosphorylase kinase g 95.2 0.014 3E-07 56.0 3.0 37 524-560 16-53 (411)
477 PF00560 LRR_1: Leucine Rich R 95.2 0.0073 1.6E-07 34.4 0.5 12 36-47 2-13 (22)
478 cd05119 RIO RIO kinase family, 95.0 0.018 3.9E-07 54.3 3.2 30 531-560 3-32 (187)
479 KOG1152 Signal transduction se 94.8 0.025 5.5E-07 60.0 3.8 33 576-608 737-770 (772)
480 KOG0576 Mitogen-activated prot 94.5 0.01 2.2E-07 64.0 -0.0 34 527-560 17-51 (829)
481 PF00560 LRR_1: Leucine Rich R 94.4 0.015 3.2E-07 33.2 0.5 22 11-33 1-22 (22)
482 KOG1947 Leucine rich repeat pr 94.3 0.0056 1.2E-07 67.4 -2.7 15 361-375 359-373 (482)
483 KOG1023 Natriuretic peptide re 94.2 0.051 1.1E-06 58.2 4.4 48 576-623 120-176 (484)
484 KOG1240 Protein kinase contain 94.2 0.039 8.4E-07 63.2 3.7 47 526-573 24-71 (1431)
485 smart00090 RIO RIO-like kinase 94.2 0.046 9.9E-07 53.7 3.8 32 529-560 32-65 (237)
486 cd05144 RIO2_C RIO kinase fami 93.6 0.091 2E-06 50.0 4.6 33 527-559 17-49 (198)
487 KOG4308 LRR-containing protein 93.2 0.00069 1.5E-08 73.0 -11.8 62 342-403 235-305 (478)
488 KOG4308 LRR-containing protein 93.1 0.00086 1.9E-08 72.3 -11.3 183 223-425 89-303 (478)
489 KOG0473 Leucine-rich repeat pr 92.8 0.0033 7.1E-08 58.8 -6.3 88 29-132 37-124 (326)
490 KOG1947 Leucine rich repeat pr 92.7 0.012 2.5E-07 64.8 -3.6 109 220-328 187-307 (482)
491 TIGR01982 UbiB 2-polyprenylphe 92.7 0.16 3.6E-06 54.7 5.3 34 526-560 119-152 (437)
492 TIGR03724 arch_bud32 Kae1-asso 92.2 0.21 4.5E-06 47.5 4.9 43 532-575 1-51 (199)
493 PF13504 LRR_7: Leucine rich r 92.0 0.086 1.9E-06 27.8 1.1 14 294-307 2-15 (17)
494 PRK10345 hypothetical protein; 91.9 0.29 6.4E-06 46.9 5.5 50 527-578 4-53 (210)
495 PRK09605 bifunctional UGMP fam 91.8 0.4 8.8E-06 53.5 7.3 62 516-578 324-393 (535)
496 PF03109 ABC1: ABC1 family; I 91.8 0.087 1.9E-06 45.3 1.5 31 530-560 16-46 (119)
497 PRK14879 serine/threonine prot 91.1 0.38 8.3E-06 46.1 5.5 45 531-576 2-54 (211)
498 cd05610 STKc_MASTL Catalytic d 91.0 0.35 7.6E-06 55.5 5.9 52 525-576 4-59 (669)
499 COG2112 Predicted Ser/Thr prot 90.7 0.64 1.4E-05 42.5 5.9 72 531-606 28-99 (201)
500 KOG0473 Leucine-rich repeat pr 90.6 0.015 3.2E-07 54.7 -4.6 87 312-401 38-124 (326)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-75 Score=696.18 Aligned_cols=659 Identities=30% Similarity=0.498 Sum_probs=474.3
Q ss_pred CCcccCCCCCCCEEEccCCcCCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCC
Q 042662 2 IPVELGNLAELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNV 81 (690)
Q Consensus 2 lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 81 (690)
+|..|+++++|++|+|++|.+.+.+|.+++++++|++|+|++|.+.+.+|..++++++|++|++++|++.+.+|..++++
T Consensus 156 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l 235 (968)
T PLN00113 156 IPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGL 235 (968)
T ss_pred CChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcC
Confidence 34455556666666666666555555556666666666666666555556666666666666666666665566666666
Q ss_pred CCCCEEecCCC-----------CCCCCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEc
Q 042662 82 STLKSLYLHNV-----------RLPNLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSL 150 (690)
Q Consensus 82 ~~L~~L~l~~~-----------~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 150 (690)
++|++|++++| .+++|+.|++++|.+.+.+|..+.++++|++|++++|.+++.+|..+.++++|++|++
T Consensus 236 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l 315 (968)
T PLN00113 236 TSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHL 315 (968)
T ss_pred CCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEEC
Confidence 66666666555 2345666666666666666666666666666666666666666666666666666666
Q ss_pred cCCcCCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCcccccCCCCCCEEECCC
Q 042662 151 NDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGR 230 (690)
Q Consensus 151 ~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~ 230 (690)
++|.+.+.. | ..+..+++|+.|++++|.+.+.+|..++.+. +|+.|++++|++++.+|..++.+++|+.|++++
T Consensus 316 ~~n~~~~~~---~--~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~-~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~ 389 (968)
T PLN00113 316 FSNNFTGKI---P--VALTSLPRLQVLQLWSNKFSGEIPKNLGKHN-NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFS 389 (968)
T ss_pred CCCccCCcC---C--hhHhcCCCCCEEECcCCCCcCcCChHHhCCC-CCcEEECCCCeeEeeCChhHhCcCCCCEEECcC
Confidence 666655433 1 4456677777777777777777777777765 777777777777777777777777788888888
Q ss_pred CcCcccchhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCc-cc
Q 042662 231 NKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTS-IP 309 (690)
Q Consensus 231 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~p 309 (690)
|.+.+.+|..+..+++|+.|++++|.+++.+|..|..+++|+.|++++|.+++.++..+..+++|+.|++++|++.+ +|
T Consensus 390 n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p 469 (968)
T PLN00113 390 NSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLP 469 (968)
T ss_pred CEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecC
Confidence 88877778888888888888888888888888888888888888888888888888777788888888888888877 55
Q ss_pred ccccccCCCceeeccCCcccCCCCCCccCCcccceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCCCC
Q 042662 310 STLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLIS 389 (690)
Q Consensus 310 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 389 (690)
.. ...++|+.|++++|++++..|..+..+++|+.|++++|.+.+.+|..+.++++|++|+|++|.+++.+|..+..+++
T Consensus 470 ~~-~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 548 (968)
T PLN00113 470 DS-FGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPV 548 (968)
T ss_pred cc-cccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCccc
Confidence 43 35588999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEECcCCcCcccCChhhhcCCCCCEEEcCCCcCcccCCCCCCCCCCccccccCCCCCCCCCC-CCCcCcccccCCCCc
Q 042662 390 LKSLNLSNNNLSGTIPISLEKLLDLKEINVSFNNLEGEIPREGPFRNFSAESFKGNELLCGMPN-LQVLSCRTNHTSGKN 468 (690)
Q Consensus 390 L~~L~Ls~n~l~~~~p~~l~~l~~L~~l~ls~n~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~-l~~~~~~~~~~~~~~ 468 (690)
|+.||+++|++++.+|..+..+++|+.+++++|++.|.+|..+.+..+...++.||+.+|+.+. ....+|..... ..
T Consensus 549 L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~--~~ 626 (968)
T PLN00113 549 LSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRK--TP 626 (968)
T ss_pred CCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccc--cc
Confidence 9999999999999999999999999999999999999999999999999999999999998432 22334543211 11
Q ss_pred ccccccchhhhHHHHHHH-HhhhhhhhcCCCCcCcc-c--cccccc------ccccchhhHhhhccCCCCcccEecccCc
Q 042662 469 DLLIGIVLPLSTIFMMVV-VLLILKYRKGGKSQLND-A--NMSSVA------NQKRFTYLELFQATNGFSENNLIGRGGF 538 (690)
Q Consensus 469 ~~~~~i~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~-~--~~~~~~------~~~~~~~~~l~~at~~f~~~~~ig~g~~ 538 (690)
..+..+++++++++++++ ++++++++++++.+.+. + ...... ....++++++.. .|.+.++||+|+|
T Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ig~G~~ 703 (968)
T PLN00113 627 SWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILS---SLKEENVISRGKK 703 (968)
T ss_pred eeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHHHh---hCCcccEEccCCC
Confidence 111222222222222222 22222222222111110 0 000000 112345555544 4678899999999
Q ss_pred eeEEEEEe-CCCcEEEEEEecccccchHHHHHHHHHHH------------------------------------------
Q 042662 539 GSVYKARI-HDGMEAAVKVFDLQYRGAFKSFDIECDMM------------------------------------------ 575 (690)
Q Consensus 539 g~vy~~~l-~~~~~vavk~~~~~~~~~~~~f~~e~~~~------------------------------------------ 575 (690)
|.||+|+. .+|..||||++........ ++.+.+..+
T Consensus 704 g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~ 782 (968)
T PLN00113 704 GASYKGKSIKNGMQFVVKEINDVNSIPS-SEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERR 782 (968)
T ss_pred eeEEEEEECCCCcEEEEEEccCCccccH-HHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhcCCHHHH
Confidence 99999997 5789999998854322111 111111111
Q ss_pred ----------------------------------------------------------------HhcccCCcccccceEE
Q 042662 576 ----------------------------------------------------------------KQYGREGRVSTNGDVY 591 (690)
Q Consensus 576 ----------------------------------------------------------------pe~~~~~~~~~k~Dvy 591 (690)
||+..++.++.|+|||
T Consensus 783 ~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~ 862 (968)
T PLN00113 783 RKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIY 862 (968)
T ss_pred HHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcccccCCCCCcccchh
Confidence 8998889999999999
Q ss_pred ehhHHHHHHhcCCCCCCccCCCcccHHHHHHhhCCC-CccccccccccCCcccccccHHHHHHHHHHHhcch--------
Q 042662 592 SFGIMLMETFTRKKPTDEVFSGEMTLKRWVNDFLPI-SVMEVVDTNLLSQEDKHFTTKEQFMKVIDANLLTR-------- 662 (690)
Q Consensus 592 sfGv~llel~tg~~p~~~~~~~~~~l~~~~~~~~~~-~~~~~~D~~l~~~~~~~~~~~~~~~~~~~~al~C~-------- 662 (690)
||||+++||+||+.|++..++....+++|++....+ ...+++||.+...... ..+++.++.+++.+|+
T Consensus 863 S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~Cl~~~P~~RP 939 (968)
T PLN00113 863 GFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSV---NQNEIVEVMNLALHCTATDPTARP 939 (968)
T ss_pred hHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCc---cHHHHHHHHHHHHhhCcCCchhCc
Confidence 999999999999999987777677899999887766 5777889988653322 3377889999999999
Q ss_pred --HHHHHHHHhhhhhh
Q 042662 663 --EDNYFMTKEQRVSL 676 (690)
Q Consensus 663 --~~v~~~L~~~~~~~ 676 (690)
.||+++|+++.+..
T Consensus 940 t~~evl~~L~~~~~~~ 955 (968)
T PLN00113 940 CANDVLKTLESASRSS 955 (968)
T ss_pred CHHHHHHHHHHhhccc
Confidence 89999999886543
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5e-52 Score=494.24 Aligned_cols=446 Identities=35% Similarity=0.542 Sum_probs=301.2
Q ss_pred CCccc-CCCCCCCEEEccCCcCCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccC
Q 042662 2 IPVEL-GNLAELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFN 80 (690)
Q Consensus 2 lp~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 80 (690)
+|..+ .++++|++|+|++|.+++.+|. +.+++|++|+|++|.+++.+|..++++++|++|++++|.+.+.+|..+++
T Consensus 109 ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 186 (968)
T PLN00113 109 IPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTN 186 (968)
T ss_pred CChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhh
Confidence 34443 3666666666666666655553 34555555555555555555555555555555555555555555555555
Q ss_pred CCCCCEEecCCC-----------CCCCCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEE
Q 042662 81 VSTLKSLYLHNV-----------RLPNLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLS 149 (690)
Q Consensus 81 l~~L~~L~l~~~-----------~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 149 (690)
+++|++|++++| .+++|+.|++++|.+++.+|..+.++++|++|++++|.+++.+|..|+++++|++|+
T Consensus 187 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 266 (968)
T PLN00113 187 LTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLF 266 (968)
T ss_pred CcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEE
Confidence 555555555554 233455555555555555555555555555555555555555555555555555555
Q ss_pred ccCCcCCCcCC---------------------CCCcccCCCCCCCCCEEEccCCcCCCCCChhhhhccccCcEEEeecCc
Q 042662 150 LNDNYLTSSTP---------------------KLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCN 208 (690)
Q Consensus 150 L~~n~l~~~~~---------------------~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~ 208 (690)
+++|.+.+..+ .+| ..+.++++|+.|++++|.+.+.+|..+..++ +|+.|++++|.
T Consensus 267 L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p--~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~L~~n~ 343 (968)
T PLN00113 267 LYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIP--ELVIQLQNLEILHLFSNNFTGKIPVALTSLP-RLQVLQLWSNK 343 (968)
T ss_pred CcCCeeeccCchhHhhccCcCEEECcCCeeccCCC--hhHcCCCCCcEEECCCCccCCcCChhHhcCC-CCCEEECcCCC
Confidence 55554443221 001 2344555555666666655555555555554 56666666666
Q ss_pred ccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCccc
Q 042662 209 ISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPAC 288 (690)
Q Consensus 209 l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 288 (690)
+++.+|..++.+++|+.|++++|.+++.+|.++..+++|+.|++++|.+.+.+|..+..+++|+.|++++|.+++..|..
T Consensus 344 l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~ 423 (968)
T PLN00113 344 FSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSE 423 (968)
T ss_pred CcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChh
Confidence 66566666666666666666666666666666666666666666666666666666667777777777777777777777
Q ss_pred ccCCCCCCeeeCCCCccCc-ccccccccCCCceeeccCCcccCCCCCCccCCcccceeeccccccccccCccccCCCCCC
Q 042662 289 SGNLTNLRKLYLGSNQLTS-IPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQ 367 (690)
Q Consensus 289 ~~~l~~L~~L~L~~n~l~~-~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 367 (690)
+..+++|+.|++++|.+++ +|..++.+++|+.|++++|++.+.+|..+ ..++|+.|++++|.+++.+|..+..+++|+
T Consensus 424 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~ 502 (968)
T PLN00113 424 FTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELM 502 (968)
T ss_pred HhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccC
Confidence 7777777777777777776 55566677788888888888877777655 457888999999999999999999999999
Q ss_pred eeeccCccccccCCcccCCCCCCCEEECcCCcCcccCChhhhcCCCCCEEEcCCCcCcccCCCC-CCCCCCccccccCCC
Q 042662 368 YLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKEINVSFNNLEGEIPRE-GPFRNFSAESFKGNE 446 (690)
Q Consensus 368 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~l~ls~n~l~~~~p~~-~~~~~~~~~~~~~n~ 446 (690)
.|+|++|++.+.+|..+..+++|++|++++|.+++.+|..+..+++|+.|++++|++++.+|.. ..+..+..+.+.+|+
T Consensus 503 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~ 582 (968)
T PLN00113 503 QLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH 582 (968)
T ss_pred EEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCc
Confidence 9999999999999999999999999999999999999999999999999999999999998864 345667778888888
Q ss_pred CCCCCCC
Q 042662 447 LLCGMPN 453 (690)
Q Consensus 447 ~lc~~~~ 453 (690)
..+..|.
T Consensus 583 l~~~~p~ 589 (968)
T PLN00113 583 LHGSLPS 589 (968)
T ss_pred ceeeCCC
Confidence 7765553
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=313.90 Aligned_cols=393 Identities=25% Similarity=0.259 Sum_probs=288.6
Q ss_pred CEEEccCCcCCccCCccccCC--CCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCCCEEecC
Q 042662 13 QKLWLDNNSLTGTIPSSIFNL--SSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTLKSLYLH 90 (690)
Q Consensus 13 ~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 90 (690)
+.||.+.+.+...--..+... +.-+.||+++|.+..+.+..|.++++|+.+++..|.++ .+|...+...
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sg-------- 125 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESG-------- 125 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hccccccccc--------
Confidence 455666665553211222221 23455777777777676777777777777777777776 5554333333
Q ss_pred CCCCCCCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCC
Q 042662 91 NVRLPNLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSN 170 (690)
Q Consensus 91 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~ 170 (690)
+|+.|+|.+|.++..-..++..++.|+.|||+.|.++.+.-..|..-.++++|+|++|.++.... ..|.+
T Consensus 126 -----hl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~-----~~F~~ 195 (873)
T KOG4194|consen 126 -----HLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLET-----GHFDS 195 (873)
T ss_pred -----ceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccccc-----ccccc
Confidence 46666666666665555667777788888888888876655677777788888888888876642 45667
Q ss_pred CCCCCEEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEE
Q 042662 171 CKYLEYFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLL 250 (690)
Q Consensus 171 l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L 250 (690)
+.+|-.|.|++|.++..-+..|..++ .|+.|+|..|++.-.-.-.|..+++|+.|.+..|.+...-...|..|.+++.|
T Consensus 196 lnsL~tlkLsrNrittLp~r~Fk~L~-~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l 274 (873)
T KOG4194|consen 196 LNSLLTLKLSRNRITTLPQRSFKRLP-KLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHL 274 (873)
T ss_pred cchheeeecccCcccccCHHHhhhcc-hhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeeccccee
Confidence 77788888888888755455555566 78888888888764445567788888888888888887777778888888888
Q ss_pred eCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccc-cccccCCCceeeccCCccc
Q 042662 251 SLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPS-TLWNLKDILHLNLSSNSFT 329 (690)
Q Consensus 251 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~-~~~~~~~L~~L~L~~n~l~ 329 (690)
+|..|+++..-..++.+++.|+.|+||.|.+..+.++...-+++|++|+|++|+++.+++ .+..+..|+.|+|++|+++
T Consensus 275 ~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~ 354 (873)
T KOG4194|consen 275 NLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID 354 (873)
T ss_pred ecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchH
Confidence 888888887777788888888888888888888877777778888888888888888664 5667788888888888887
Q ss_pred CCCCCCccCCcccceeeccccccccccCc---cccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCcCcccCCh
Q 042662 330 GPLPLKIGNFNVLIQLDLSMNNFSGVIPT---KIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPI 406 (690)
Q Consensus 330 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~---~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~ 406 (690)
..-...|..+++|++|||++|.+++.+.+ .|.++++|+.|.+.+|++....-.+|..+++|++|||.+|.+...-|.
T Consensus 355 ~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~n 434 (873)
T KOG4194|consen 355 HLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPN 434 (873)
T ss_pred HHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeeccc
Confidence 66667777888888888888888876654 366788888888888888766567888888888888888888877788
Q ss_pred hhhcCCCCCEEEcCCCcCcc
Q 042662 407 SLEKLLDLKEINVSFNNLEG 426 (690)
Q Consensus 407 ~l~~l~~L~~l~ls~n~l~~ 426 (690)
.|..+ .|++|-+..-.+-+
T Consensus 435 AFe~m-~Lk~Lv~nSssflC 453 (873)
T KOG4194|consen 435 AFEPM-ELKELVMNSSSFLC 453 (873)
T ss_pred ccccc-hhhhhhhcccceEE
Confidence 88877 77777665544444
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-37 Score=310.09 Aligned_cols=396 Identities=22% Similarity=0.253 Sum_probs=336.4
Q ss_pred CCEEECcCCcccccCCcccCCCCC--CCeeecccCcCcccCCccccCCCCCCEEecCCCCCCCCCEEeccCCccCccCCc
Q 042662 36 LSSLDLSDNSLTGEIPYEIGNLHN--LEWMAFSFNKLVGVVPTAIFNVSTLKSLYLHNVRLPNLEELLLWGNNFSGTIPS 113 (690)
Q Consensus 36 L~~L~Ls~n~l~~~~p~~~~~l~~--L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~~~l~~L~~L~L~~n~l~~~~p~ 113 (690)
-+.||++++.+..+.-..+..+-- -+.|++++|.++..-+..|.++++ |+.+++..|.++ .+|.
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~n-------------Lq~v~l~~N~Lt-~IP~ 119 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPN-------------LQEVNLNKNELT-RIPR 119 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCc-------------ceeeeeccchhh-hccc
Confidence 456788888876443344433322 346999999998777777777765 566666666666 7888
Q ss_pred cccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChhhh
Q 042662 114 FIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIG 193 (690)
Q Consensus 114 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~ 193 (690)
......+|+.|+|.+|.|+.+..+.+..++.|+.|||+.|.++.... +.+..-.++++|+|++|.++..-...|.
T Consensus 120 f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~-----~sfp~~~ni~~L~La~N~It~l~~~~F~ 194 (873)
T KOG4194|consen 120 FGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPK-----PSFPAKVNIKKLNLASNRITTLETGHFD 194 (873)
T ss_pred ccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccC-----CCCCCCCCceEEeecccccccccccccc
Confidence 77777889999999999998888899999999999999999987652 5667778899999999999988888888
Q ss_pred hccccCcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCE
Q 042662 194 NLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQ 273 (690)
Q Consensus 194 ~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 273 (690)
.+. +|..|.|+.|+++...+..|.++++|+.|+|..|+|.-.--..|.++++|+.|.|..|.+...-...|..+.++++
T Consensus 195 ~ln-sL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~ 273 (873)
T KOG4194|consen 195 SLN-SLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEH 273 (873)
T ss_pred ccc-hheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccce
Confidence 887 9999999999999777788888999999999999998444567999999999999999999877788999999999
Q ss_pred EEeeCCcCcccCcccccCCCCCCeeeCCCCccCccc-ccccccCCCceeeccCCcccCCCCCCccCCcccceeecccccc
Q 042662 274 LDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIP-STLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNF 352 (690)
Q Consensus 274 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p-~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 352 (690)
|+|..|+++..-..++-++++|+.|++|+|.+..+. +....+++|++|+|++|+++..-+..|..+..|++|+|++|.+
T Consensus 274 l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi 353 (873)
T KOG4194|consen 274 LNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSI 353 (873)
T ss_pred eecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccch
Confidence 999999999888889999999999999999999964 4555678999999999999988899999999999999999999
Q ss_pred ccccCccccCCCCCCeeeccCccccccCCc---ccCCCCCCCEEECcCCcCcccCChhhhcCCCCCEEEcCCCcCcccCC
Q 042662 353 SGVIPTKIGGLKDLQYLFLEYNRLQGSIPN---SIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKEINVSFNNLEGEIP 429 (690)
Q Consensus 353 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~---~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~l~ls~n~l~~~~p 429 (690)
+..-...|..+++|++|||++|.+++.+.+ .|..+++|+.|++.+|++.......+..+..|+.||+.+|.+...-|
T Consensus 354 ~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 354 DHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQP 433 (873)
T ss_pred HHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecc
Confidence 988788899999999999999999987764 46789999999999999997767789999999999999999987766
Q ss_pred CCCCCCCCccccccCCCCCCCC
Q 042662 430 REGPFRNFSAESFKGNELLCGM 451 (690)
Q Consensus 430 ~~~~~~~~~~~~~~~n~~lc~~ 451 (690)
..-.--.+..+.+.....+|+|
T Consensus 434 nAFe~m~Lk~Lv~nSssflCDC 455 (873)
T KOG4194|consen 434 NAFEPMELKELVMNSSSFLCDC 455 (873)
T ss_pred cccccchhhhhhhcccceEEec
Confidence 5422224555666666777765
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=7.7e-38 Score=303.84 Aligned_cols=417 Identities=29% Similarity=0.438 Sum_probs=216.1
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCCCEEecC
Q 042662 11 ELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTLKSLYLH 90 (690)
Q Consensus 11 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 90 (690)
.|+.+.+++|.+. .+.+.+.++..|.+|++++|+++ ..|.+++.+..++.|+.++|+++ .+|..++.+.+|++|+.+
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 3444444444444 23333444444455555555444 34444444444444444444444 444444444444444444
Q ss_pred CCC----------CCCCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCC
Q 042662 91 NVR----------LPNLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTP 160 (690)
Q Consensus 91 ~~~----------l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 160 (690)
.|. +..|+.++..+|+++ ..|..++++.+|..+++.+|+++...|. .-+|+.|++||...|.+...+
T Consensus 123 ~n~~~el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~-~i~m~~L~~ld~~~N~L~tlP- 199 (565)
T KOG0472|consen 123 SNELKELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPEN-HIAMKRLKHLDCNSNLLETLP- 199 (565)
T ss_pred ccceeecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHH-HHHHHHHHhcccchhhhhcCC-
Confidence 442 223445555555555 4455555555555555555555543232 223555555555555554443
Q ss_pred CCCcccCCCCCCCCCEEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCcccc-cCCCCCCEEECCCCcCcccchh
Q 042662 161 KLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEI-SNLTNLIAIYLGRNKLNGSIPI 239 (690)
Q Consensus 161 ~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~l~~n~l~~~~p~ 239 (690)
+.++.+.+|+.|++..|++. .+| .|..+. .|++|++..|.+. .+|... .++++|..||+.+|++. ..|.
T Consensus 200 -----~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs-~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pd 269 (565)
T KOG0472|consen 200 -----PELGGLESLELLYLRRNKIR-FLP-EFPGCS-LLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPD 269 (565)
T ss_pred -----hhhcchhhhHHHHhhhcccc-cCC-CCCccH-HHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCch
Confidence 44555555555555555554 233 444444 4555555555554 333333 25555555555555555 4455
Q ss_pred hhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCccc-----------------------------------
Q 042662 240 ALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGF----------------------------------- 284 (690)
Q Consensus 240 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~----------------------------------- 284 (690)
.+..+.+|.+||+++|.++ .+|..++++ .|+.|.+.+|.+...
T Consensus 270 e~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~ 347 (565)
T KOG0472|consen 270 EICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETA 347 (565)
T ss_pred HHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccccccc
Confidence 5555555555555555555 344445555 555555555543210
Q ss_pred ---Ccccc---cCCCCCCeeeCCCCccCcccccccccCC---CceeeccCCccc-----------------------CCC
Q 042662 285 ---IPACS---GNLTNLRKLYLGSNQLTSIPSTLWNLKD---ILHLNLSSNSFT-----------------------GPL 332 (690)
Q Consensus 285 ---~~~~~---~~l~~L~~L~L~~n~l~~~p~~~~~~~~---L~~L~L~~n~l~-----------------------~~~ 332 (690)
.+..+ ..+.+.+.|+++.-+++.+|...|.... .+..+++.|++. +-+
T Consensus 348 ~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv 427 (565)
T KOG0472|consen 348 MTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFV 427 (565)
T ss_pred CCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccc
Confidence 00000 1122344444444444444443332222 333444444432 345
Q ss_pred CCCccCCcccceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCcCcccCChhhhcCC
Q 042662 333 PLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLL 412 (690)
Q Consensus 333 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~ 412 (690)
|..++.+++|+.|+|++|.+. .+|..++.+..|+.|+++.|++. .+|..+-.+..|+.+-.++|++....|+.+.++.
T Consensus 428 ~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~ 505 (565)
T KOG0472|consen 428 PLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMR 505 (565)
T ss_pred hHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhh
Confidence 555555666666666666554 45666666666666666666654 4455444444455554555555544555577788
Q ss_pred CCCEEEcCCCcCcccCCCCCCCCCCccccccCCCC
Q 042662 413 DLKEINVSFNNLEGEIPREGPFRNFSAESFKGNEL 447 (690)
Q Consensus 413 ~L~~l~ls~n~l~~~~p~~~~~~~~~~~~~~~n~~ 447 (690)
+|+.||+.+|.+....|..+.+.++..+.+.|||+
T Consensus 506 nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 506 NLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred hcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 88888888888887777777777777777777765
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=6.9e-36 Score=304.31 Aligned_cols=389 Identities=26% Similarity=0.397 Sum_probs=315.6
Q ss_pred cCCCCCCCEEEccCCcCC-ccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCC
Q 042662 6 LGNLAELQKLWLDNNSLT-GTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTL 84 (690)
Q Consensus 6 ~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 84 (690)
-+-|+..+-+|+++|.++ +..|.....+++++.|.|...++. .+|.+++.+.+|++|.+++|++. .+-..+..++.|
T Consensus 3 tgVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~L 80 (1255)
T KOG0444|consen 3 TGVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRL 80 (1255)
T ss_pred ccccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhh
Confidence 356788899999999998 578888999999999999999887 78999999999999999999987 334556666665
Q ss_pred CEEecCCCCCCCCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCc
Q 042662 85 KSLYLHNVRLPNLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSF 164 (690)
Q Consensus 85 ~~L~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 164 (690)
+.+.+..|++++ ..+|..+..+..|+.|||++|++. ..|..+..-+++-.|+|++|++.+++.
T Consensus 81 Rsv~~R~N~LKn------------sGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn---- 143 (1255)
T KOG0444|consen 81 RSVIVRDNNLKN------------SGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPN---- 143 (1255)
T ss_pred HHHhhhcccccc------------CCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCc----
Confidence 555555554432 257888999999999999999998 468889999999999999999988753
Q ss_pred ccCCCCCCCCCEEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCcccccCCCCCCEEECCCCcCc-ccchhhhcC
Q 042662 165 LSSLSNCKYLEYFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLN-GSIPIALGK 243 (690)
Q Consensus 165 l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~-~~~p~~l~~ 243 (690)
+-+-++..|-.|+|++|.+. .+|+.+..+. .|+.|+|++|.+....-..+-.+++|+.|.+++.+-+ ..+|.++..
T Consensus 144 -~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~-~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~ 220 (1255)
T KOG0444|consen 144 -SLFINLTDLLFLDLSNNRLE-MLPPQIRRLS-MLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDD 220 (1255)
T ss_pred -hHHHhhHhHhhhccccchhh-hcCHHHHHHh-hhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhh
Confidence 44677888899999999886 6788888887 8999999999876543344556777888888876543 357888889
Q ss_pred CCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccccccccCCCceeec
Q 042662 244 LKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPSTLWNLKDILHLNL 323 (690)
Q Consensus 244 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~~~~L~~L~L 323 (690)
+.+|..+|++.|.+. .+|+.+..+++|+.|+||+|.++.. ....+...+|++|++|.|+++.+|..+..+++|+.|++
T Consensus 221 l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL-~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~ 298 (1255)
T KOG0444|consen 221 LHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITEL-NMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYA 298 (1255)
T ss_pred hhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeee-eccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHh
Confidence 999999999999988 7888899999999999999998843 33455567899999999999999999999999999999
Q ss_pred cCCccc-CCCCCCccCCcccceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCcCcc
Q 042662 324 SSNSFT-GPLPLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSG 402 (690)
Q Consensus 324 ~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~ 402 (690)
.+|+++ .-+|..++.+.+|+.+..++|.+. ..|+.+..|..|+.|.|+.|++- .+|+++.-++.|+.||+..|.-..
T Consensus 299 n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLV 376 (1255)
T KOG0444|consen 299 NNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLV 376 (1255)
T ss_pred ccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCcc
Confidence 999876 468889999999999999999886 78889999999999999999987 788999999999999999986554
Q ss_pred cCChhhhcCCCCCEEEcC
Q 042662 403 TIPISLEKLLDLKEINVS 420 (690)
Q Consensus 403 ~~p~~l~~l~~L~~l~ls 420 (690)
..|..-..-.+++.-++.
T Consensus 377 MPPKP~da~~~lefYNID 394 (1255)
T KOG0444|consen 377 MPPKPNDARKKLEFYNID 394 (1255)
T ss_pred CCCCcchhhhcceeeecc
Confidence 444332333445544443
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2e-37 Score=300.96 Aligned_cols=400 Identities=29% Similarity=0.463 Sum_probs=234.8
Q ss_pred ccCCCCCCCEEEccCCcCCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCC
Q 042662 5 ELGNLAELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTL 84 (690)
Q Consensus 5 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 84 (690)
.+.++..|.+|++.+|++. ..|++++.+..+..|+.++|+++ .+|..++.+.+|+.|++++|.+. .+|+.++.+..|
T Consensus 63 dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l 139 (565)
T KOG0472|consen 63 DLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDL 139 (565)
T ss_pred hhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhh
Confidence 3455566666666666665 45555666666666666666555 55555555556666666665555 445555555555
Q ss_pred CEEecCCCCC----------CCCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCc
Q 042662 85 KSLYLHNVRL----------PNLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNY 154 (690)
Q Consensus 85 ~~L~l~~~~l----------~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 154 (690)
..|+..+|++ .+|..+++.+|.+....|. .-+++.|++||...|-++ .+|+.++.+.+|..|++..|.
T Consensus 140 ~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~-~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nk 217 (565)
T KOG0472|consen 140 EDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPEN-HIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNK 217 (565)
T ss_pred hhhhccccccccCchHHHHHHHHHHhhccccchhhCCHH-HHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcc
Confidence 5555555522 2334444445544422222 222445555554444443 234445555555555555544
Q ss_pred CCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCcccccCCCCCCEEECCCCcCc
Q 042662 155 LTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLN 234 (690)
Q Consensus 155 l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~ 234 (690)
+... +.|+.|..|+.++++.|.+. .+|...++..+++..||+++|+++ ..|+.++-+.+|.+||+++|.++
T Consensus 218 i~~l-------Pef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is 288 (565)
T KOG0472|consen 218 IRFL-------PEFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS 288 (565)
T ss_pred cccC-------CCCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc
Confidence 4322 33444444444444444443 233333321124444444444444 34444444444444444444444
Q ss_pred ccchhhhcCCCCCCEEeCcCC-----------------------------------------------------------
Q 042662 235 GSIPIALGKLKKLQLLSLEDN----------------------------------------------------------- 255 (690)
Q Consensus 235 ~~~p~~l~~l~~L~~L~L~~n----------------------------------------------------------- 255 (690)
..|.+++++ .|+.|.+.+|
T Consensus 289 -~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tki 366 (565)
T KOG0472|consen 289 -SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKI 366 (565)
T ss_pred -cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhh
Confidence 233344444 4444444444
Q ss_pred ------cCcccCCccccCCCC---CCEEEeeCCcCcccCcccccCCCCC-CeeeCCCCccCcccccccccCCCceeeccC
Q 042662 256 ------QLEGSIPDNLCGLAA---LFQLDLGGNKLCGFIPACSGNLTNL-RKLYLGSNQLTSIPSTLWNLKDILHLNLSS 325 (690)
Q Consensus 256 ------~l~~~~~~~~~~l~~---L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~p~~~~~~~~L~~L~L~~ 325 (690)
+++ .+|+....... .+..+++.|++. .+|..+..+..+ +.+.+++|.+.-+|..+..+++|..|+|++
T Consensus 367 L~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~N 444 (565)
T KOG0472|consen 367 LDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSN 444 (565)
T ss_pred hcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeeccc
Confidence 333 22322211111 444555555554 233333333322 234555555555666777889999999999
Q ss_pred CcccCCCCCCccCCcccceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCcCcccCC
Q 042662 326 NSFTGPLPLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIP 405 (690)
Q Consensus 326 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p 405 (690)
|-+. .+|..++.+..|+.|+++.|.|. .+|..+..+..++.+-.++|++....|..+.++.+|..|||.+|.+. .+|
T Consensus 445 N~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IP 521 (565)
T KOG0472|consen 445 NLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIP 521 (565)
T ss_pred chhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCC
Confidence 8886 78999999999999999999887 67777666677777888889998677777999999999999999998 788
Q ss_pred hhhhcCCCCCEEEcCCCcCc
Q 042662 406 ISLEKLLDLKEINVSFNNLE 425 (690)
Q Consensus 406 ~~l~~l~~L~~l~ls~n~l~ 425 (690)
..++++++|+.|++++|+|.
T Consensus 522 p~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 522 PILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhhccccceeEEEecCCccC
Confidence 89999999999999999997
No 8
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.98 E-value=8.8e-35 Score=296.29 Aligned_cols=371 Identities=26% Similarity=0.386 Sum_probs=318.9
Q ss_pred cCCCCCCEEECcCCccc-ccCCcccCCCCCCCeeecccCcCcccCCccccCCCCCCEEecCCCCCCCCCEEeccCCccCc
Q 042662 31 FNLSSLSSLDLSDNSLT-GEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTLKSLYLHNVRLPNLEELLLWGNNFSG 109 (690)
Q Consensus 31 ~~l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~~~l~~L~~L~L~~n~l~~ 109 (690)
+-++-.+-.|+++|.++ +..|..+..++++++|.|...++. .+|+.++.+.+|++|.+++ |++.
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~H-------------N~L~- 68 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAH-------------NQLI- 68 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhh-------------hhhH-
Confidence 44667888999999998 688999999999999999999987 7899999888755555554 4444
Q ss_pred cCCccccCCCCCCeEecccCccccc-CCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCC
Q 042662 110 TIPSFIFNASKLFTLGLEENSFSGF-IPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGIL 188 (690)
Q Consensus 110 ~~p~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~ 188 (690)
.+-.++..++.|+.+.+.+|++... +|+.+-++..|+.|||++|++...+ ..+...+++..|+|++|++.. |
T Consensus 69 ~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP------~~LE~AKn~iVLNLS~N~Iet-I 141 (1255)
T KOG0444|consen 69 SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVP------TNLEYAKNSIVLNLSYNNIET-I 141 (1255)
T ss_pred hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcc------hhhhhhcCcEEEEcccCcccc-C
Confidence 3345577889999999999998533 7888999999999999999998875 678888999999999999984 5
Q ss_pred Chh-hhhccccCcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCc-ccCCcccc
Q 042662 189 PRA-IGNLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLE-GSIPDNLC 266 (690)
Q Consensus 189 p~~-~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~-~~~~~~~~ 266 (690)
|.. +.++. .|-.|+|++|++. .+|+.+..+..|++|+|++|.+....-..+..+++|+.|.+++.+-+ ..+|.++.
T Consensus 142 Pn~lfinLt-DLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld 219 (1255)
T KOG0444|consen 142 PNSLFINLT-DLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLD 219 (1255)
T ss_pred CchHHHhhH-hHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchh
Confidence 554 45565 7999999999998 67778899999999999999887543344556788889999887543 46888999
Q ss_pred CCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccccccccCCCceeeccCCcccCCCCCCccCCcccceee
Q 042662 267 GLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLD 346 (690)
Q Consensus 267 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 346 (690)
.+.+|..+++|.|.+. .+|+++-.+++|+.|+||+|+++.+........+|+.|+++.|+++ .+|..+..++.|+.|.
T Consensus 220 ~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy 297 (1255)
T KOG0444|consen 220 DLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLY 297 (1255)
T ss_pred hhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHH
Confidence 9999999999999987 7899999999999999999999998877777889999999999998 8999999999999999
Q ss_pred cccccccc-ccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCcCcccCChhhhcCCCCCEEEcCCCcCc
Q 042662 347 LSMNNFSG-VIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKEINVSFNNLE 425 (690)
Q Consensus 347 Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~l~ls~n~l~ 425 (690)
+.+|+++- -+|..++.+..|+.+..++|.+. ..|..+..|..|+.|.|++|++. ++|+.+.-++.|+.||+..|+-.
T Consensus 298 ~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 298 ANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred hccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 99998864 47889999999999999999987 88999999999999999999998 78999999999999999999754
Q ss_pred ccCC
Q 042662 426 GEIP 429 (690)
Q Consensus 426 ~~~p 429 (690)
--.|
T Consensus 376 VMPP 379 (1255)
T KOG0444|consen 376 VMPP 379 (1255)
T ss_pred cCCC
Confidence 3334
No 9
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-33 Score=299.84 Aligned_cols=389 Identities=30% Similarity=0.375 Sum_probs=254.5
Q ss_pred CCCCCEEEccCCcCCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCCCEEe
Q 042662 9 LAELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTLKSLY 88 (690)
Q Consensus 9 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 88 (690)
.-+|++|||++|.+. ..|..+..+++|+.|+++.|.+. ..|.+.+++.+|++|+|..|.+. ..|..+..+++|++|+
T Consensus 44 ~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~Ld 120 (1081)
T KOG0618|consen 44 RVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLD 120 (1081)
T ss_pred eeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccc
Confidence 444888888888877 67777888888888888888877 66777788888888888888776 6788888888888888
Q ss_pred cCCCCC----------C-------------------CCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccc
Q 042662 89 LHNVRL----------P-------------------NLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTF 139 (690)
Q Consensus 89 l~~~~l----------~-------------------~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~ 139 (690)
++.|.+ . .++.+++..|.+.+.++..+..+++ .|+|.+|.+.. -.+
T Consensus 121 lS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~---~dl 195 (1081)
T KOG0618|consen 121 LSFNHFGPIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEV---LDL 195 (1081)
T ss_pred cchhccCCCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhh---hhh
Confidence 887721 1 2455555556666555555555544 46666666651 234
Q ss_pred cCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCcccccC
Q 042662 140 GSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEISN 219 (690)
Q Consensus 140 ~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~ 219 (690)
.++.+|+.|....|+++... -..++|+.|....|.++...+. ..+.+|+.+++++|+++ .+|++++.
T Consensus 196 s~~~~l~~l~c~rn~ls~l~---------~~g~~l~~L~a~~n~l~~~~~~---p~p~nl~~~dis~n~l~-~lp~wi~~ 262 (1081)
T KOG0618|consen 196 SNLANLEVLHCERNQLSELE---------ISGPSLTALYADHNPLTTLDVH---PVPLNLQYLDISHNNLS-NLPEWIGA 262 (1081)
T ss_pred hhccchhhhhhhhcccceEE---------ecCcchheeeeccCcceeeccc---cccccceeeecchhhhh-cchHHHHh
Confidence 45555666666666554432 1234566666666666522221 11236788888888887 45577888
Q ss_pred CCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCccccc---------
Q 042662 220 LTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSG--------- 290 (690)
Q Consensus 220 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--------- 290 (690)
+.+|+.++..+|+++ .+|..+...++|+.|....|.+. .+|.....++.|++|+|..|.+...++..+.
T Consensus 263 ~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~l 340 (1081)
T KOG0618|consen 263 CANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTL 340 (1081)
T ss_pred cccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHH
Confidence 888888888888875 66667777777777777777776 5565666677777777777776543322221
Q ss_pred ----------------CCCCCCeeeCCCCccCc-ccccccccCCCceeeccCCcccCCCCCCccCCcccceeeccccccc
Q 042662 291 ----------------NLTNLRKLYLGSNQLTS-IPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFS 353 (690)
Q Consensus 291 ----------------~l~~L~~L~L~~n~l~~-~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 353 (690)
.++.|+.|++.+|.++. .-+.+.++.+|+.|+|++|++.......+.+++.|++|+||||.++
T Consensus 341 n~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~ 420 (1081)
T KOG0618|consen 341 NVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT 420 (1081)
T ss_pred hhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh
Confidence 23356666666666666 3334555667777777777766433445566777777777777776
Q ss_pred cccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCcCcccCChhhhcCCCCCEEEcCCCc
Q 042662 354 GVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKEINVSFNN 423 (690)
Q Consensus 354 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~l~ls~n~ 423 (690)
.+|..+..+..|++|...+|++. ..| .+..++.|+.+|+|.|+++...-......++|++||+++|.
T Consensus 421 -~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 421 -TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred -hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 55666667777777777777766 455 56677777777777777664322222223677777777775
No 10
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.95 E-value=7e-31 Score=280.40 Aligned_cols=395 Identities=30% Similarity=0.384 Sum_probs=285.7
Q ss_pred CcccCCCCCCCEEEccCCcCCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCC
Q 042662 3 PVELGNLAELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVS 82 (690)
Q Consensus 3 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 82 (690)
|..+..+.+|+.|+++.|.+. ..|.+.+++.+|++|.|.+|.+. .+|.++..+++|++|++++|++. .+|..+..++
T Consensus 61 p~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt 137 (1081)
T KOG0618|consen 61 PIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLT 137 (1081)
T ss_pred CchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhh
Confidence 555667778888888888877 56677778888888888888776 77888888888888888888776 5555554444
Q ss_pred CCCEE-------------------ecCCC--------CCCCCCE-EeccCCccCccCCccccCCCCCCeEecccCccccc
Q 042662 83 TLKSL-------------------YLHNV--------RLPNLEE-LLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGF 134 (690)
Q Consensus 83 ~L~~L-------------------~l~~~--------~l~~L~~-L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 134 (690)
.+..+ ++..| ...++++ |+|..|.+. . ..+.++.+|+.|....|++...
T Consensus 138 ~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l 214 (1081)
T KOG0618|consen 138 AEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRYNEME-V--LDLSNLANLEVLHCERNQLSEL 214 (1081)
T ss_pred HHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhheeeecccchhh-h--hhhhhccchhhhhhhhcccceE
Confidence 43333 33333 1234555 888888876 2 2356677888888888887643
Q ss_pred CCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCc
Q 042662 135 IPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIP 214 (690)
Q Consensus 135 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p 214 (690)
.- .-++|+.|+.++|.+.... ....-.+|++++++.|.+++ +|.+++.+. +|+.++..+|+++ .+|
T Consensus 215 ~~----~g~~l~~L~a~~n~l~~~~-------~~p~p~nl~~~dis~n~l~~-lp~wi~~~~-nle~l~~n~N~l~-~lp 280 (1081)
T KOG0618|consen 215 EI----SGPSLTALYADHNPLTTLD-------VHPVPLNLQYLDISHNNLSN-LPEWIGACA-NLEALNANHNRLV-ALP 280 (1081)
T ss_pred Ee----cCcchheeeeccCcceeec-------cccccccceeeecchhhhhc-chHHHHhcc-cceEecccchhHH-hhH
Confidence 11 2356777777777776432 12223567777787777774 457777776 7888888777775 566
Q ss_pred ccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccCCccc--------------------------cCC
Q 042662 215 EEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPDNL--------------------------CGL 268 (690)
Q Consensus 215 ~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~--------------------------~~l 268 (690)
..+....+|+.|.+..|.+. .+|.....++.|+.|+|..|++. .+|+.+ ..+
T Consensus 281 ~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~ 358 (1081)
T KOG0618|consen 281 LRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNH 358 (1081)
T ss_pred HHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhh
Confidence 66667777777777777776 34555566677777777777665 222211 123
Q ss_pred CCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccc-cccccCCCceeeccCCcccCCCCCCccCCcccceeec
Q 042662 269 AALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPS-TLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDL 347 (690)
Q Consensus 269 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~-~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 347 (690)
+.|+.|++.+|.++...-..+-++.+|+.|+|++|++..+|+ .+.++..|+.|+|++|.++ .+|..+..+..|++|..
T Consensus 359 ~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhh
Confidence 457778888999888766678889999999999999999996 5778999999999999998 78899999999999999
Q ss_pred cccccccccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCcCcccCChhhhcCCCCCEEEcCCC
Q 042662 348 SMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKEINVSFN 422 (690)
Q Consensus 348 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~l~ls~n 422 (690)
.+|++. ..| .+..++.|+.+|++.|+++...-......++|++||+++|.-....-..+..+.++...+++-|
T Consensus 438 hsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 438 HSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred cCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 999998 566 7889999999999999998543222223389999999999744344455666666666666655
No 11
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.3e-28 Score=251.86 Aligned_cols=161 Identities=32% Similarity=0.517 Sum_probs=139.6
Q ss_pred ccccchhhHhhhccCCCCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH---------------
Q 042662 511 NQKRFTYLELFQATNGFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM--------------- 575 (690)
Q Consensus 511 ~~~~~~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~--------------- 575 (690)
..+.|+|+|+..||++|+++++||+|+||.||||.+++|..||||++.....+..++|.+|++++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999998775543266799999988
Q ss_pred --------------------------------------------------------------------------------
Q 042662 576 -------------------------------------------------------------------------------- 575 (690)
Q Consensus 576 -------------------------------------------------------------------------------- 575 (690)
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence
Q ss_pred --------------------------HhcccCCcccccceEEehhHHHHHHhcCCCCCCccC-CCcccHHHHHHhhCCC-
Q 042662 576 --------------------------KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEVF-SGEMTLKRWVNDFLPI- 627 (690)
Q Consensus 576 --------------------------pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~~-~~~~~l~~~~~~~~~~- 627 (690)
|||..+|++|+|+|||||||||+|++|||+|.|... .+...+++|++..+.+
T Consensus 221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~ 300 (361)
T KOG1187|consen 221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG 300 (361)
T ss_pred ccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc
Confidence 888888999999999999999999999999998654 3456699999998888
Q ss_pred Ccccccccccc-CCcccccccHHHHHHHHHHHhcch----------HHHHHHHHhhhhh
Q 042662 628 SVMEVVDTNLL-SQEDKHFTTKEQFMKVIDANLLTR----------EDNYFMTKEQRVS 675 (690)
Q Consensus 628 ~~~~~~D~~l~-~~~~~~~~~~~~~~~~~~~al~C~----------~~v~~~L~~~~~~ 675 (690)
++.+++||++. +.+. ..+++.+++++|++|+ .||+++|+.+...
T Consensus 301 ~~~eiiD~~l~~~~~~----~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 301 KLREIVDPRLKEGEYP----DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred chhheeCCCccCCCCC----hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 79999999997 3333 1268999999999999 8899999766543
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=2.3e-23 Score=248.74 Aligned_cols=336 Identities=22% Similarity=0.252 Sum_probs=153.6
Q ss_pred cccCCCCCCEEECcCCcc------cccCCcccCCCC-CCCeeecccCcCcccCCccccCCCCCCEEecCCCCCCCCCEEe
Q 042662 29 SIFNLSSLSSLDLSDNSL------TGEIPYEIGNLH-NLEWMAFSFNKLVGVVPTAIFNVSTLKSLYLHNVRLPNLEELL 101 (690)
Q Consensus 29 ~~~~l~~L~~L~Ls~n~l------~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~~~l~~L~~L~ 101 (690)
+|.++++|++|.+.++.. ...+|..|..++ +|++|.+.++.+. .+|..+ ... +|+.|+
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~-------------~L~~L~ 617 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPE-------------NLVKLQ 617 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-Ccc-------------CCcEEE
Confidence 455555555555544321 223344444432 3555555555443 334333 122 233344
Q ss_pred ccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccC
Q 042662 102 LWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYN 181 (690)
Q Consensus 102 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~ 181 (690)
+.+|.+. .++..+..+++|+.|+|+++.....+|. ++.+++|++|+|++|...... | ..++++++|+.|++++
T Consensus 618 L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~l---p--~si~~L~~L~~L~L~~ 690 (1153)
T PLN03210 618 MQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVEL---P--SSIQYLNKLEDLDMSR 690 (1153)
T ss_pred CcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCcccc---c--hhhhccCCCCEEeCCC
Confidence 4444333 2344445555666666655543333442 555556666666555332221 1 3455555555555555
Q ss_pred CcCCCCCChhhhhccccCcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCc---
Q 042662 182 NPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLE--- 258 (690)
Q Consensus 182 n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~--- 258 (690)
|..-..+|..+ .+. +|+.|++++|.....+|.. .++|+.|++++|.+. .+|..+ .+++|+.|.+.++...
T Consensus 691 c~~L~~Lp~~i-~l~-sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~ 763 (1153)
T PLN03210 691 CENLEILPTGI-NLK-SLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLW 763 (1153)
T ss_pred CCCcCccCCcC-CCC-CCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhcc
Confidence 54444444433 232 5555555555443333322 234555555555554 333332 3455555555442211
Q ss_pred ----ccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCC-ccCcccccccccCCCceeeccCCcccCCCC
Q 042662 259 ----GSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSN-QLTSIPSTLWNLKDILHLNLSSNSFTGPLP 333 (690)
Q Consensus 259 ----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~ 333 (690)
...+..+...++|+.|+|++|...+.+|..++++++|+.|++++| .+..+|..+ .+++|+.|++++|.....+|
T Consensus 764 ~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p 842 (1153)
T PLN03210 764 ERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFP 842 (1153)
T ss_pred ccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccc
Confidence 011111122344555555555444445555555555555555554 233344433 34555555555544333333
Q ss_pred CCccCCcccceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCC
Q 042662 334 LKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNN 398 (690)
Q Consensus 334 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n 398 (690)
.. .++|+.|+|++|.++ .+|.++..+++|+.|++++|+-...+|..+..+++|+.+++++|
T Consensus 843 ~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 843 DI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred cc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 21 234455555555554 34444555555555555554333334444444555555555544
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=2.2e-23 Score=248.89 Aligned_cols=338 Identities=21% Similarity=0.198 Sum_probs=212.6
Q ss_pred cccCCCCCCCEEEccCCcC------CccCCccccCCC-CCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCc
Q 042662 4 VELGNLAELQKLWLDNNSL------TGTIPSSIFNLS-SLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPT 76 (690)
Q Consensus 4 ~~~~~l~~L~~L~Ls~n~l------~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 76 (690)
.+|.++++|+.|.+..+.. ...+|..|..++ +|+.|++.++.+. .+|..| ...+|++|++.+|++. .+|.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 4689999999999976643 335677777764 6999999999887 778887 5789999999999987 5677
Q ss_pred cccCCCCCCEEecCCCCCCCCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCC
Q 042662 77 AIFNVSTLKSLYLHNVRLPNLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLT 156 (690)
Q Consensus 77 ~l~~l~~L~~L~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 156 (690)
.+..+++|+.|+++++ ...+.+|. +..+++|+.|++++|.....+|..++++++|+.|++++|...
T Consensus 629 ~~~~l~~Lk~L~Ls~~-------------~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L 694 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGS-------------KNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENL 694 (1153)
T ss_pred ccccCCCCCEEECCCC-------------CCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCc
Confidence 7777777666665543 32234442 555666666666666555556666666666666666665432
Q ss_pred CcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCcccccCCCCCCEEECCCCcC---
Q 042662 157 SSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKL--- 233 (690)
Q Consensus 157 ~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l--- 233 (690)
... | . -.++++|+.|++++|.....+|.. ..+|+.|++++|.+. .+|..+ .+++|+.|.+.++..
T Consensus 695 ~~L---p--~-~i~l~sL~~L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l 762 (1153)
T PLN03210 695 EIL---P--T-GINLKSLYRLNLSGCSRLKSFPDI----STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKL 762 (1153)
T ss_pred Ccc---C--C-cCCCCCCCEEeCCCCCCccccccc----cCCcCeeecCCCccc-cccccc-cccccccccccccchhhc
Confidence 222 1 1 124566666666666544444432 225667777776665 445443 456666666655321
Q ss_pred ----cccchhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCc-cCcc
Q 042662 234 ----NGSIPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQ-LTSI 308 (690)
Q Consensus 234 ----~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~ 308 (690)
....+..+..+++|+.|++++|...+.+|..++++++|+.|++++|...+.+|... .+++|+.|++++|. +..+
T Consensus 763 ~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~ 841 (1153)
T PLN03210 763 WERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTF 841 (1153)
T ss_pred cccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccc
Confidence 11112222334567777777776666677777777777777777665444555544 56677777777653 3334
Q ss_pred cccccccCCCceeeccCCcccCCCCCCccCCcccceeeccccccccccCccccCCCCCCeeeccCcc
Q 042662 309 PSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNR 375 (690)
Q Consensus 309 p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 375 (690)
|.. ..+|+.|+|++|.+. .+|..+..+++|+.|++++|+--..+|..+..+++|+.+++++|.
T Consensus 842 p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 842 PDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 432 245677777777765 466666777777777777644333455566667777777777664
No 14
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.89 E-value=3.5e-25 Score=215.79 Aligned_cols=392 Identities=24% Similarity=0.264 Sum_probs=252.6
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeeccc-CcCcccCCccccCCCCCCEEec
Q 042662 11 ELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSF-NKLVGVVPTAIFNVSTLKSLYL 89 (690)
Q Consensus 11 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~l 89 (690)
.-..|+|..|.|+...|.+|+.+++||.||||+|.|+.+-|.+|.++++|..|-+.+ |+|+...-..|+++.+|+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slq---- 143 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQ---- 143 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHH----
Confidence 456788999999988888899999999999999999888899999998887776666 888855557788877644
Q ss_pred CCCCCCCCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCcc----
Q 042662 90 HNVRLPNLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFL---- 165 (690)
Q Consensus 90 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l---- 165 (690)
.|.+.-|++.-.....+..+++|..|.+-+|.+..+-..+|..+..++.+.+..|.+.... .++++
T Consensus 144 ---------rLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdC-nL~wla~~~ 213 (498)
T KOG4237|consen 144 ---------RLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDC-NLPWLADDL 213 (498)
T ss_pred ---------HHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccc-ccchhhhHH
Confidence 4444455555444566777778888888888877554457778888888877777643321 01111
Q ss_pred ----cCCCCCCCCCEEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCc-ccccCCCCCCEEECCCCcCcccchhh
Q 042662 166 ----SSLSNCKYLEYFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIP-EEISNLTNLIAIYLGRNKLNGSIPIA 240 (690)
Q Consensus 166 ----~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~~p~~ 240 (690)
-.++......-..+++..+.-.-+..+......+..-..+.+...+..| ..|..+++|+.|++++|+++++-+.+
T Consensus 214 a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~a 293 (498)
T KOG4237|consen 214 AMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGA 293 (498)
T ss_pred hhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhh
Confidence 1122222222222333333333333333221122222223333333444 34778899999999999999888889
Q ss_pred hcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCc------ccccc--
Q 042662 241 LGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTS------IPSTL-- 312 (690)
Q Consensus 241 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------~p~~~-- 312 (690)
|.....+++|.|..|++...-...|.++..|+.|+|.+|+|+...|..|..+.+|.+|+|-.|.+.- +-+++
T Consensus 294 Fe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~ 373 (498)
T KOG4237|consen 294 FEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRK 373 (498)
T ss_pred hcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhh
Confidence 9999999999999998886666778889999999999999998888888888899999888775533 10111
Q ss_pred ---------cccCCCceeeccCCcccC---CCCCCc---------cCCcccceeeccccccccccCccccCCCCCCeeec
Q 042662 313 ---------WNLKDILHLNLSSNSFTG---PLPLKI---------GNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFL 371 (690)
Q Consensus 313 ---------~~~~~L~~L~L~~n~l~~---~~~~~~---------~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 371 (690)
.....++.+.+++..+.. .-|... ..++.+.+.-=-.|.....+|..+. ..-.+|++
T Consensus 374 ~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP--~d~telyl 451 (498)
T KOG4237|consen 374 KSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRGIP--VDVTELYL 451 (498)
T ss_pred CCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchhhcCCCCC--chhHHHhc
Confidence 011234455555544321 111111 1223333322222222223333221 24567888
Q ss_pred cCccccccCCcccCCCCCCCEEECcCCcCcccCChhhhcCCCCCEEEcCCC
Q 042662 372 EYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKEINVSFN 422 (690)
Q Consensus 372 ~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~l~ls~n 422 (690)
.+|.++ .+|.. .+.+| .+|+++|+++-.-...|.+++.|.+|-+|+|
T Consensus 452 ~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 452 DGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred ccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 888887 66665 56677 8899999888666667888888888888876
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=1e-20 Score=209.76 Aligned_cols=266 Identities=26% Similarity=0.337 Sum_probs=169.1
Q ss_pred CCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCC
Q 042662 96 NLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLE 175 (690)
Q Consensus 96 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~ 175 (690)
.-..|+++.|.++ .+|..+. .+|+.|++.+|+++. +|. ..++|++|++++|+++..+ . ..++|+
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsLP------~---lp~sL~ 265 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLP------V---LPPGLL 265 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCccc------C---cccccc
Confidence 4567788888777 5676664 467888888888874 453 2467888888888777542 1 124677
Q ss_pred EEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCC
Q 042662 176 YFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDN 255 (690)
Q Consensus 176 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n 255 (690)
.|++++|.++. +|. .+.+|+.|++++|+++. +|. ..++|+.|++++|.+++ +|.. ..+|+.|++++|
T Consensus 266 ~L~Ls~N~L~~-Lp~----lp~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N 332 (788)
T PRK15387 266 ELSIFSNPLTH-LPA----LPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNN 332 (788)
T ss_pred eeeccCCchhh-hhh----chhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccccC
Confidence 77777777653 332 22367777777777763 443 23567777777777774 3332 235667777777
Q ss_pred cCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccccccccCCCceeeccCCcccCCCCCC
Q 042662 256 QLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPSTLWNLKDILHLNLSSNSFTGPLPLK 335 (690)
Q Consensus 256 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~~~ 335 (690)
.+++ +|.. ..+|+.|+|++|++++. |.. .++|+.|++++|+++.+|... .+|+.|++++|.+++ +|..
T Consensus 333 ~L~~-LP~l---p~~Lq~LdLS~N~Ls~L-P~l---p~~L~~L~Ls~N~L~~LP~l~---~~L~~LdLs~N~Lt~-LP~l 400 (788)
T PRK15387 333 QLTS-LPTL---PSGLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLTSLPALP---SGLKELIVSGNRLTS-LPVL 400 (788)
T ss_pred cccc-cccc---ccccceEecCCCccCCC-CCC---CcccceehhhccccccCcccc---cccceEEecCCcccC-CCCc
Confidence 7763 4431 24677777777777743 322 246677777777777766532 457777777777763 4432
Q ss_pred ccCCcccceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCcCcccCChhhhc
Q 042662 336 IGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEK 410 (690)
Q Consensus 336 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~ 410 (690)
.++|+.|++++|.+++ +|.. ..+|+.|++++|+++ .+|..+..+++|+.|+|++|++++..+..+..
T Consensus 401 ---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 401 ---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred ---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 2466777777777764 4432 235666777777776 56666777777777777777777666655533
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=8.2e-21 Score=210.59 Aligned_cols=53 Identities=28% Similarity=0.369 Sum_probs=29.9
Q ss_pred CCEEEccCCcCCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCc
Q 042662 12 LQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLV 71 (690)
Q Consensus 12 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 71 (690)
-..|++++|.++ .+|+.+. ++|+.|++++|+++ .+|. .+++|++|++++|+++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt 255 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT 255 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccC
Confidence 445666666666 4555553 35666666666665 3443 2355666666666555
No 17
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.83 E-value=7.5e-23 Score=199.64 Aligned_cols=369 Identities=23% Similarity=0.244 Sum_probs=212.2
Q ss_pred CC-cccCCCCCCCEEEccCCcCCccCCccccCCCCCCEEECcC-CcccccCCcccCCCCCCCeeecccCcCcccCCcccc
Q 042662 2 IP-VELGNLAELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSD-NSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIF 79 (690)
Q Consensus 2 lp-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 79 (690)
|| .+|+.+++||+||||+|.|+.+-|++|.++.+|..|-+.+ |+|+..-.+.|++|..|+.|.+..|++.-...+.|.
T Consensus 82 iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~ 161 (498)
T KOG4237|consen 82 IPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALR 161 (498)
T ss_pred CChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHH
Confidence 45 4799999999999999999999999999999998887776 899976667899999999999999999866678888
Q ss_pred CCCCCCEEecCCCCCCCCCEEeccCCccCccCCc-cccCCCCCCeEecccCccc------------ccCCccccCCCCCC
Q 042662 80 NVSTLKSLYLHNVRLPNLEELLLWGNNFSGTIPS-FIFNASKLFTLGLEENSFS------------GFIPNTFGSLRNLE 146 (690)
Q Consensus 80 ~l~~L~~L~l~~~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~n~l~------------~~~~~~~~~l~~L~ 146 (690)
.+++|..|.+..| .+. .++. .+..+..++.+.+..|.+- ...|..++...-..
T Consensus 162 dL~~l~lLslyDn-------------~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 162 DLPSLSLLSLYDN-------------KIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred Hhhhcchhcccch-------------hhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 8887655555554 433 2232 4555666666666666631 11222333332222
Q ss_pred EEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChh-hhhccccCcEEEeecCcccccCcccccCCCCCCE
Q 042662 147 WLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRA-IGNLSQSMEDFQMHNCNISGSIPEEISNLTNLIA 225 (690)
Q Consensus 147 ~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~-~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 225 (690)
-..+.++.+....+. ........+..--.+.+...+..|.. |..++ +|+.|+|++|.+++.-+.+|.....+++
T Consensus 228 p~rl~~~Ri~q~~a~----kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~-~L~~lnlsnN~i~~i~~~aFe~~a~l~e 302 (498)
T KOG4237|consen 228 PYRLYYKRINQEDAR----KFLCSLESLPSRLSSEDFPDSICPAKCFKKLP-NLRKLNLSNNKITRIEDGAFEGAAELQE 302 (498)
T ss_pred hHHHHHHHhcccchh----hhhhhHHhHHHhhccccCcCCcChHHHHhhcc-cceEeccCCCccchhhhhhhcchhhhhh
Confidence 222333222221100 00000011110011112222333322 33333 5555555555555555555555555555
Q ss_pred EECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCc------------------ccCcc
Q 042662 226 IYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLC------------------GFIPA 287 (690)
Q Consensus 226 L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~------------------~~~~~ 287 (690)
|.|..|++...-...|.++..|+.|+|.+|+++...|.+|..+.+|.+|+|-.|.+. |..|
T Consensus 303 L~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~- 381 (498)
T KOG4237|consen 303 LYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPR- 381 (498)
T ss_pred hhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCC-
Confidence 666555555444445555555666666666655555555555555555555544432 1111
Q ss_pred cccCCCCCCeeeCCCCccCcc----cc---------cccccCCCcee-eccCCcccCCCCCCccCCcccceeeccccccc
Q 042662 288 CSGNLTNLRKLYLGSNQLTSI----PS---------TLWNLKDILHL-NLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFS 353 (690)
Q Consensus 288 ~~~~l~~L~~L~L~~n~l~~~----p~---------~~~~~~~L~~L-~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 353 (690)
+ +.-..++.+.+++..+... |+ .-..++.+... ..++..+. .+|..+. ..-++|++.+|.++
T Consensus 382 C-q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~ 457 (498)
T KOG4237|consen 382 C-QSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT 457 (498)
T ss_pred C-CCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc
Confidence 1 1112455555655544332 11 11122333322 23333332 4443332 23467888888887
Q ss_pred cccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCC
Q 042662 354 GVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNN 398 (690)
Q Consensus 354 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n 398 (690)
.+|.. .+.+| .+++++|++...-...|.+++.|.+|-|+.|
T Consensus 458 -~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 458 -SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred -ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 45555 45677 7889999888666778888888888888765
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.80 E-value=1.4e-19 Score=202.34 Aligned_cols=246 Identities=25% Similarity=0.410 Sum_probs=123.9
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCCCEEecC
Q 042662 11 ELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTLKSLYLH 90 (690)
Q Consensus 11 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 90 (690)
+...|+++++.++ .+|..+. ++|+.|+|++|.++ .+|..+. .+|++|++++|+++ .+|..+. .
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~-------- 241 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--D-------- 241 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--c--------
Confidence 4556666666666 3554443 35666777777666 4454433 36666666666665 3443332 1
Q ss_pred CCCCCCCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCC
Q 042662 91 NVRLPNLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSN 170 (690)
Q Consensus 91 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~ 170 (690)
+|+.|++++|.+. .+|..+. ++|+.|++++|+++. +|..+. ++|+.|++++|+++..
T Consensus 242 -----~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~L------------ 298 (754)
T PRK15370 242 -----TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRTL------------ 298 (754)
T ss_pred -----cccEEECcCCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCccccC------------
Confidence 2444444444444 3444332 345556666555553 344332 3455555555544432
Q ss_pred CCCCCEEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEE
Q 042662 171 CKYLEYFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLL 250 (690)
Q Consensus 171 l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L 250 (690)
|..+. .+|+.|++++|.++. +|..+ .++|+.|++++|.+++ +|..+. ++|+.|
T Consensus 299 ------------------P~~lp---~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L 351 (754)
T PRK15370 299 ------------------PAHLP---SGITHLNVQSNSLTA-LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVL 351 (754)
T ss_pred ------------------cccch---hhHHHHHhcCCcccc-CCccc--cccceeccccCCcccc-CChhhc--CcccEE
Confidence 22111 145555666666553 33322 2456666666666653 343332 466666
Q ss_pred eCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccccccc----cCCCceeeccCC
Q 042662 251 SLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPSTLWN----LKDILHLNLSSN 326 (690)
Q Consensus 251 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~----~~~L~~L~L~~n 326 (690)
++++|+++ .+|..+ .++|+.|+|++|.++.. |..+. .+|+.|++++|+++.+|..+.. ++.+..|++.+|
T Consensus 352 ~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt~L-P~~l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~N 425 (754)
T PRK15370 352 DVSKNQIT-VLPETL--PPTITTLDVSRNALTNL-PENLP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYN 425 (754)
T ss_pred ECCCCCCC-cCChhh--cCCcCEEECCCCcCCCC-CHhHH--HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCC
Confidence 66666655 344333 24566666666665532 32222 2456666666666655543322 244445555555
Q ss_pred ccc
Q 042662 327 SFT 329 (690)
Q Consensus 327 ~l~ 329 (690)
.++
T Consensus 426 pls 428 (754)
T PRK15370 426 PFS 428 (754)
T ss_pred Ccc
Confidence 443
No 19
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.79 E-value=1.3e-19 Score=202.53 Aligned_cols=246 Identities=27% Similarity=0.411 Sum_probs=119.5
Q ss_pred CCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCC
Q 042662 96 NLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLE 175 (690)
Q Consensus 96 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~ 175 (690)
+...|+++++.++ .+|..+ .++|+.|++++|+++. +|..+. ++|++|++++|+++..+ ..+. ..|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~I--p~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~LtsLP------~~l~--~~L~ 244 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACI--PEQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLTSIP------ATLP--DTIQ 244 (754)
T ss_pred CceEEEeCCCCcC-cCCccc--ccCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccccCC------hhhh--cccc
Confidence 4566677666666 455544 2466777777777764 444332 46777777777665432 1111 2455
Q ss_pred EEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCC
Q 042662 176 YFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDN 255 (690)
Q Consensus 176 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n 255 (690)
.|++++|.+. .+|..+. .+|+.|++++|+++ .+|..+. ++|+.|++++|++++ +|..+. ++|+.|++++|
T Consensus 245 ~L~Ls~N~L~-~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N 314 (754)
T PRK15370 245 EMELSINRIT-ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSN 314 (754)
T ss_pred EEECcCCccC-cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCC
Confidence 6666666555 3444432 14555555555555 3444332 345555555555552 232221 24444555555
Q ss_pred cCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccccccccCCCceeeccCCcccCCCCCC
Q 042662 256 QLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPSTLWNLKDILHLNLSSNSFTGPLPLK 335 (690)
Q Consensus 256 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~~~ 335 (690)
.++. +|..+ .+ +|+.|++++|.++.+|..+. ++|+.|++++|+++ .+|..
T Consensus 315 ~Lt~-LP~~l--~~------------------------sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~-~LP~~ 364 (754)
T PRK15370 315 SLTA-LPETL--PP------------------------GLKTLEAGENALTSLPASLP--PELQVLDVSKNQIT-VLPET 364 (754)
T ss_pred cccc-CCccc--cc------------------------cceeccccCCccccCChhhc--CcccEEECCCCCCC-cCChh
Confidence 4442 23221 13 44444444444444443332 34555555555444 23332
Q ss_pred ccCCcccceeeccccccccccCccccCCCCCCeeeccCccccccCCccc----CCCCCCCEEECcCCcCc
Q 042662 336 IGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSI----GDLISLKSLNLSNNNLS 401 (690)
Q Consensus 336 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l----~~l~~L~~L~Ls~n~l~ 401 (690)
+ .+.|+.|++++|.++ .+|..+. ..|+.|++++|++. .+|..+ ..++.+..|++.+|.++
T Consensus 365 l--p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 365 L--PPTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred h--cCCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 2 134555555555554 2333322 24555555555554 333322 23355566666666655
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=2.4e-19 Score=186.38 Aligned_cols=281 Identities=23% Similarity=0.264 Sum_probs=134.1
Q ss_pred eEecccCcccc-cCCccccCCCCCCEEEccCCcCCCcC-CCCCcccCCCCCCCCCEEEccCCcCCCCCChhhhhccccCc
Q 042662 123 TLGLEENSFSG-FIPNTFGSLRNLEWLSLNDNYLTSST-PKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIGNLSQSME 200 (690)
Q Consensus 123 ~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~L~ 200 (690)
.|+|..+.+++ .....|..+.+|+.|+++++.++... .. ....+...+.++.++++++.+.+ .+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~--i~~~l~~~~~l~~l~l~~~~~~~-~~~~~-------- 70 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKA--LASALRPQPSLKELCLSLNETGR-IPRGL-------- 70 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHH--HHHHHhhCCCceEEeccccccCC-cchHH--------
Confidence 35566666652 23334455566667777666654321 00 01233444555555555554431 00000
Q ss_pred EEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCC---CCEEeCcCCcCcc----cCCccccCC-CCCC
Q 042662 201 DFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKK---LQLLSLEDNQLEG----SIPDNLCGL-AALF 272 (690)
Q Consensus 201 ~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~---L~~L~L~~n~l~~----~~~~~~~~l-~~L~ 272 (690)
..++..+..+++|+.|++++|.+.+..+..+..+.. |+.|++++|.+.+ .+...+..+ ++|+
T Consensus 71 ----------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~ 140 (319)
T cd00116 71 ----------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALE 140 (319)
T ss_pred ----------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCce
Confidence 112223344445555555555544333333333332 5555555554442 111223333 4555
Q ss_pred EEEeeCCcCccc----CcccccCCCCCCeeeCCCCccCc-----ccccccccCCCceeeccCCcccCC----CCCCccCC
Q 042662 273 QLDLGGNKLCGF----IPACSGNLTNLRKLYLGSNQLTS-----IPSTLWNLKDILHLNLSSNSFTGP----LPLKIGNF 339 (690)
Q Consensus 273 ~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~-----~p~~~~~~~~L~~L~L~~n~l~~~----~~~~~~~l 339 (690)
.|++++|.+++. ++..+..+++|+.|++++|.+++ ++..+...++|+.|++++|.+++. +...+..+
T Consensus 141 ~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~ 220 (319)
T cd00116 141 KLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASL 220 (319)
T ss_pred EEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhccc
Confidence 555555555421 22233444555556665555552 222333344566666666655422 22233445
Q ss_pred cccceeeccccccccccCcccc-----CCCCCCeeeccCccccc----cCCcccCCCCCCCEEECcCCcCccc----CCh
Q 042662 340 NVLIQLDLSMNNFSGVIPTKIG-----GLKDLQYLFLEYNRLQG----SIPNSIGDLISLKSLNLSNNNLSGT----IPI 406 (690)
Q Consensus 340 ~~L~~L~Ls~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~Ls~n~l~~~----~p~ 406 (690)
++|++|++++|.+++.....+. ..+.|+.|++++|.++. .+...+..+++|+.+|+++|.++.. ...
T Consensus 221 ~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~ 300 (319)
T cd00116 221 KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAE 300 (319)
T ss_pred CCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHH
Confidence 5666666666665542222111 23567777777776651 2233445556777777777777644 223
Q ss_pred hhhcC-CCCCEEEcCCCcC
Q 042662 407 SLEKL-LDLKEINVSFNNL 424 (690)
Q Consensus 407 ~l~~l-~~L~~l~ls~n~l 424 (690)
.+... +.|+++++.+|++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 301 SLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHhhcCCchhhcccCCCCC
Confidence 33334 5666777766653
No 21
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=2.9e-19 Score=185.78 Aligned_cols=209 Identities=25% Similarity=0.320 Sum_probs=136.5
Q ss_pred EEeccCCccC-ccCCccccCCCCCCeEecccCccccc----CCccccCCCCCCEEEccCCcCCCcCCCC-CcccCCCCCC
Q 042662 99 ELLLWGNNFS-GTIPSFIFNASKLFTLGLEENSFSGF----IPNTFGSLRNLEWLSLNDNYLTSSTPKL-SFLSSLSNCK 172 (690)
Q Consensus 99 ~L~L~~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~l~~l~~l~ 172 (690)
.|+|..+.++ ...+..+..+.+|+.|+++++.++.. ++..+...+.|++|+++++.+.+....+ .....+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4677777776 34455566778899999999998543 4556677888999999999876311111 0113466688
Q ss_pred CCCEEEccCCcCCCCCChhhhhccc--cCcEEEeecCcccc----cCcccccCC-CCCCEEECCCCcCccc----chhhh
Q 042662 173 YLEYFGFYNNPLGGILPRAIGNLSQ--SMEDFQMHNCNISG----SIPEEISNL-TNLIAIYLGRNKLNGS----IPIAL 241 (690)
Q Consensus 173 ~L~~L~l~~n~l~~~~p~~~~~~~~--~L~~L~L~~n~l~~----~~p~~l~~l-~~L~~L~l~~n~l~~~----~p~~l 241 (690)
+|+.|++++|.+.+..+..+..+.. +|++|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 8999999988888766666665552 28888888888763 233344555 7788888888887732 33445
Q ss_pred cCCCCCCEEeCcCCcCccc----CCccccCCCCCCEEEeeCCcCccc----CcccccCCCCCCeeeCCCCccCc
Q 042662 242 GKLKKLQLLSLEDNQLEGS----IPDNLCGLAALFQLDLGGNKLCGF----IPACSGNLTNLRKLYLGSNQLTS 307 (690)
Q Consensus 242 ~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~ 307 (690)
..+++|+.|++++|.+.+. ++..+..+++|+.|++++|.+.+. ++..+..+++|+.|++++|.+++
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 5667777777777777642 223344456777777777766533 22334455666666666666554
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.67 E-value=1.1e-18 Score=151.49 Aligned_cols=156 Identities=35% Similarity=0.582 Sum_probs=83.9
Q ss_pred CCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCee
Q 042662 219 NLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKL 298 (690)
Q Consensus 219 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 298 (690)
++.+++.|.+++|+++ .+|+.+..+.+|+.|++++|++. .+|..++.+++|+.|+++-|++. ..|..|+.+|.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 4445555555555555 34444555555555555555555 44444555555555555444443 344444445555555
Q ss_pred eCCCCccCcccccccccCCCceeeccCCcccCCCCCCccCCcccceeeccccccccccCccccCCCCCCeeeccCccccc
Q 042662 299 YLGSNQLTSIPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQG 378 (690)
Q Consensus 299 ~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 378 (690)
||.+|++.. ..+|..|..+..|..|+|+.|.+. .+|..++.+++|+.|.+.+|.+.
T Consensus 108 dltynnl~e----------------------~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll- 163 (264)
T KOG0617|consen 108 DLTYNNLNE----------------------NSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL- 163 (264)
T ss_pred hcccccccc----------------------ccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-
Confidence 555444443 134444445555555555555554 45555566666666666666655
Q ss_pred cCCcccCCCCCCCEEECcCCcCc
Q 042662 379 SIPNSIGDLISLKSLNLSNNNLS 401 (690)
Q Consensus 379 ~~~~~l~~l~~L~~L~Ls~n~l~ 401 (690)
.+|..++.+..|+.|.+.+|+++
T Consensus 164 ~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 164 SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred hCcHHHHHHHHHHHHhcccceee
Confidence 55666666666666666666666
No 23
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.65 E-value=4.2e-18 Score=147.92 Aligned_cols=163 Identities=29% Similarity=0.483 Sum_probs=145.8
Q ss_pred cCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccccccccCCCceeeccCCcccCCCCCCccCCccccee
Q 042662 266 CGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQL 345 (690)
Q Consensus 266 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 345 (690)
.++.+++.|.|++|+++ .+|..+..+.+|+.|++++|++..+|..++.+++|+.|+++-|++. .+|..|+.++.|+.|
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 45667788889999988 4455678889999999999999999999999999999999999987 889999999999999
Q ss_pred ecccccccc-ccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCcCcccCChhhhcCCCCCEEEcCCCcC
Q 042662 346 DLSMNNFSG-VIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKEINVSFNNL 424 (690)
Q Consensus 346 ~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~l~ls~n~l 424 (690)
||++|++.. ..|..|..+..|+.|+|++|.+. .+|..++++++|+.|.+.+|.+. ..|..++.++.|++|.+.+|.+
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 999999976 46888888999999999999997 88999999999999999999998 7899999999999999999999
Q ss_pred cccCCCCC
Q 042662 425 EGEIPREG 432 (690)
Q Consensus 425 ~~~~p~~~ 432 (690)
+-..|+.+
T Consensus 186 ~vlppel~ 193 (264)
T KOG0617|consen 186 TVLPPELA 193 (264)
T ss_pred eecChhhh
Confidence 97766544
No 24
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.63 E-value=1.1e-16 Score=169.16 Aligned_cols=146 Identities=18% Similarity=0.242 Sum_probs=111.3
Q ss_pred cchhhHhhhccCCCC---------cccEecccCceeEEEEEeC----CCcEEEEEEecccc-cchHHHHHHHHHHH----
Q 042662 514 RFTYLELFQATNGFS---------ENNLIGRGGFGSVYKARIH----DGMEAAVKVFDLQY-RGAFKSFDIECDMM---- 575 (690)
Q Consensus 514 ~~~~~~l~~at~~f~---------~~~~ig~g~~g~vy~~~l~----~~~~vavk~~~~~~-~~~~~~f~~e~~~~---- 575 (690)
.++|+|--+|...|. -+++||.|.||.||+|.|. ....||||.++..+ .+..++|..|..+|
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 467776666655553 3678999999999999985 34789999999887 44577899999988
Q ss_pred --------------------------------------------------------------------------------
Q 042662 576 -------------------------------------------------------------------------------- 575 (690)
Q Consensus 576 -------------------------------------------------------------------------------- 575 (690)
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnL 768 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNL 768 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccce
Confidence
Q ss_pred ----------------------------------HhcccCCcccccceEEehhHHHHHHhc-CCCCCCccCCCcccHHHH
Q 042662 576 ----------------------------------KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDEVFSGEMTLKRW 620 (690)
Q Consensus 576 ----------------------------------pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~~~~~~~~l~~~ 620 (690)
||.+..+++|..+|||||||||||+++ |.|||.++.. +++.+-
T Consensus 769 vCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--QdVIka 846 (996)
T KOG0196|consen 769 VCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVIKA 846 (996)
T ss_pred EEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch--HHHHHH
Confidence 999999999999999999999999888 9999986542 222222
Q ss_pred HHhhCCCCccccccccccCCcccccccHHHHHHHHHHHhcch----------HHHHHHHHhhhhhhhc
Q 042662 621 VNDFLPISVMEVVDTNLLSQEDKHFTTKEQFMKVIDANLLTR----------EDNYFMTKEQRVSLVF 678 (690)
Q Consensus 621 ~~~~~~~~~~~~~D~~l~~~~~~~~~~~~~~~~~~~~al~C~----------~~v~~~L~~~~~~~~~ 678 (690)
+.+ |-+|.. ++ +|-..+-++.+.|. .++|..|.++-+.-..
T Consensus 847 Ie~----------gyRLPp--Pm-----DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~S 897 (996)
T KOG0196|consen 847 IEQ----------GYRLPP--PM-----DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNS 897 (996)
T ss_pred HHh----------ccCCCC--CC-----CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchh
Confidence 221 123433 23 67778999999999 8999999877544333
No 25
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.47 E-value=6.3e-14 Score=145.11 Aligned_cols=52 Identities=29% Similarity=0.570 Sum_probs=41.1
Q ss_pred chhhHhhhccCCCCcccEecccCceeEEEEEeCCCcEEEEEEeccccc--chHHHHHHHHHHH
Q 042662 515 FTYLELFQATNGFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYR--GAFKSFDIECDMM 575 (690)
Q Consensus 515 ~~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~--~~~~~f~~e~~~~ 575 (690)
+.++|+..+ ..||+|+||+||||.|.+ .||||+++.... ...+.|+.||..+
T Consensus 389 Ip~~ev~l~-------~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~l 442 (678)
T KOG0193|consen 389 IPPEEVLLG-------ERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVL 442 (678)
T ss_pred cCHHHhhcc-------ceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 456666554 679999999999999953 599999976653 3467899999887
No 26
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.46 E-value=1.6e-14 Score=155.96 Aligned_cols=84 Identities=20% Similarity=0.178 Sum_probs=61.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCccCCCcccHHHHHHhhCCCCccccccccccCCcccccccHHHHHHH
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDEVFSGEMTLKRWVNDFLPISVMEVVDTNLLSQEDKHFTTKEQFMKV 654 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~~~~~~~~ 654 (690)
||.++.+++|+++|||||||||||++| |+.|+.....+ ..++.++ +.++.+- + +.+-.++
T Consensus 674 pEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--EVIe~i~-----------~g~lL~~-P-----e~CP~~v 734 (774)
T KOG1026|consen 674 PESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--EVIECIR-----------AGQLLSC-P-----ENCPTEV 734 (774)
T ss_pred HHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH--HHHHHHH-----------cCCcccC-C-----CCCCHHH
Confidence 999999999999999999999999999 99998754322 2333332 1223221 1 1566788
Q ss_pred HHHHhcch----------HHHHHHHHhhhhhhhc
Q 042662 655 IDANLLTR----------EDNYFMTKEQRVSLVF 678 (690)
Q Consensus 655 ~~~al~C~----------~~v~~~L~~~~~~~~~ 678 (690)
-.|-+.|. +|+...|+...++...
T Consensus 735 Y~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~ 768 (774)
T KOG1026|consen 735 YSLMLECWNENPKRRPSFKEIHSRLQAWAQASPK 768 (774)
T ss_pred HHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcc
Confidence 89999999 8888888877655443
No 27
>PLN03150 hypothetical protein; Provisional
Probab=99.43 E-value=3.5e-13 Score=150.71 Aligned_cols=118 Identities=36% Similarity=0.601 Sum_probs=101.5
Q ss_pred ccceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCcCcccCChhhhcCCCCCEEEcC
Q 042662 341 VLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKEINVS 420 (690)
Q Consensus 341 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~l~ls 420 (690)
.++.|+|++|.+.|.+|..+..+++|+.|+|++|.+.|.+|..++.+++|+.|||++|+++|.+|..+..+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcccCCCCC--CCCCCccccccCCCCCCCCCCCCCcCcc
Q 042662 421 FNNLEGEIPREG--PFRNFSAESFKGNELLCGMPNLQVLSCR 460 (690)
Q Consensus 421 ~n~l~~~~p~~~--~~~~~~~~~~~~n~~lc~~~~l~~~~~~ 460 (690)
+|+++|.+|..- .........+.+|+.+|+.|.+ ..|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l--~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGL--RACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCC--CCCc
Confidence 999999998642 1233456778999999997754 3564
No 28
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.39 E-value=1.3e-12 Score=134.71 Aligned_cols=45 Identities=29% Similarity=0.471 Sum_probs=35.8
Q ss_pred cEecccCceeEEEEEeCCCcEEEEEEecccccch--HHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGA--FKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~--~~~f~~e~~~~ 575 (690)
..+|+|+||+||+|.+.+...||||++....... .++|..|+.++
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il 93 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLL 93 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHH
Confidence 4599999999999999544449999997654332 56899999888
No 29
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.37 E-value=8.3e-13 Score=135.96 Aligned_cols=44 Identities=25% Similarity=0.383 Sum_probs=38.0
Q ss_pred cEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+.||+|-||.||.|.+.+...||||.+..... ....|.+|+++|
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iM 255 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIM 255 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHH
Confidence 66999999999999997777999999987643 457899999988
No 30
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.32 E-value=3.9e-12 Score=142.89 Aligned_cols=81 Identities=17% Similarity=0.127 Sum_probs=56.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCccCCCcccHHHHHHhhCCCCccccccccccCCcccccccHHHHHHH
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDEVFSGEMTLKRWVNDFLPISVMEVVDTNLLSQEDKHFTTKEQFMKV 654 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~~~~~~~~ 654 (690)
||+...+.+|+|+|||||||+|||++| |..||...... .-+..|.+. .||.... .|-.++
T Consensus 873 PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~-~v~~~~~~g-----------gRL~~P~-------~CP~~l 933 (1025)
T KOG1095|consen 873 PESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF-EVLLDVLEG-----------GRLDPPS-------YCPEKL 933 (1025)
T ss_pred HHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH-HHHHHHHhC-----------CccCCCC-------CCChHH
Confidence 999999999999999999999999999 88888532211 112223221 1332211 455577
Q ss_pred HHHHhcch----------HHHHHHHHhhhhh
Q 042662 655 IDANLLTR----------EDNYFMTKEQRVS 675 (690)
Q Consensus 655 ~~~al~C~----------~~v~~~L~~~~~~ 675 (690)
.+|-..|. ..+++.+..+...
T Consensus 934 y~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 934 YQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred HHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 78889999 7777777766543
No 31
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.31 E-value=3e-12 Score=136.68 Aligned_cols=48 Identities=29% Similarity=0.377 Sum_probs=37.4
Q ss_pred CcccEecccCceeEEEEEe-CCC----cEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 528 SENNLIGRGGFGSVYKARI-HDG----MEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 528 ~~~~~ig~g~~g~vy~~~l-~~~----~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
....+||+|+||+||||.+ +.| .+||||++.... .+...+|..|+-.|
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~m 752 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRM 752 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHH
Confidence 3458899999999999987 443 679999986554 45677898888666
No 32
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.23 E-value=3.1e-13 Score=138.84 Aligned_cols=194 Identities=26% Similarity=0.356 Sum_probs=114.7
Q ss_pred CCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCCCEEecCCCCCCCCCEEeccCCccCccCC
Q 042662 33 LSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTLKSLYLHNVRLPNLEELLLWGNNFSGTIP 112 (690)
Q Consensus 33 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~~~l~~L~~L~L~~n~l~~~~p 112 (690)
+.--...||+.|++. .+|..++.+..|+.+.|..|.+. .+|..+.++..|..||++ .|+++ ..|
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls-------------~NqlS-~lp 137 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLS-------------SNQLS-HLP 137 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhc-------------cchhh-cCC
Confidence 444455666666665 56666666666666666666665 566666665553333333 33333 344
Q ss_pred ccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChhh
Q 042662 113 SFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAI 192 (690)
Q Consensus 113 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~ 192 (690)
..++.++ |+.|-+++|+++ .+|+.++.+..|..||.+.|++.... ..++.+.+|+.|.+..|++. .+|..+
T Consensus 138 ~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~slp------sql~~l~slr~l~vrRn~l~-~lp~El 208 (722)
T KOG0532|consen 138 DGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQSLP------SQLGYLTSLRDLNVRRNHLE-DLPEEL 208 (722)
T ss_pred hhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhhhch------HHhhhHHHHHHHHHhhhhhh-hCCHHH
Confidence 4444442 555566666655 34555555555666666666555443 44555555666666555554 355556
Q ss_pred hhccccCcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcC---CCCCCEEeCcCC
Q 042662 193 GNLSQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGK---LKKLQLLSLEDN 255 (690)
Q Consensus 193 ~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~---l~~L~~L~L~~n 255 (690)
..+ .|..||++.|+++ .+|-.|.+++.|++|-|.+|.+. ..|..+.. ..--++|+..-|
T Consensus 209 ~~L--pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 209 CSL--PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred hCC--ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 655 4888888888887 67888888888888888888887 34444432 223345555555
No 33
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.21 E-value=4.6e-13 Score=137.61 Aligned_cols=176 Identities=35% Similarity=0.483 Sum_probs=110.5
Q ss_pred CcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeC
Q 042662 199 MEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGG 278 (690)
Q Consensus 199 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 278 (690)
-...+++.|++. .+|..++.+..|..+.+..|.+. .+|.++.++..|++|+|+.|+++ ..|..++.++ |+.|.+++
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sN 152 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSN 152 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEec
Confidence 345566666666 56666666666666667666665 56666677777777777777666 4555555554 66666666
Q ss_pred CcCcccCcccccCCCCCCeeeCCCCccCcccccccccCCCceeeccCCcccCCCCCCccCCcccceeeccccccccccCc
Q 042662 279 NKLCGFIPACSGNLTNLRKLYLGSNQLTSIPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFSGVIPT 358 (690)
Q Consensus 279 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 358 (690)
|+++ .+|..++..+.|..|+.+.|.+..+|..+..+.+|+.|.+..|++. .+|..+. .-.|..||+|.|+++ .+|.
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~-~lp~El~-~LpLi~lDfScNkis-~iPv 228 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SLPLIRLDFSCNKIS-YLPV 228 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CCceeeeecccCcee-ecch
Confidence 6665 4455555666666667677766666666666666666666666665 4454554 234566666666665 5566
Q ss_pred cccCCCCCCeeeccCccccccCCcc
Q 042662 359 KIGGLKDLQYLFLEYNRLQGSIPNS 383 (690)
Q Consensus 359 ~~~~l~~L~~L~L~~n~l~~~~~~~ 383 (690)
.|..+..|++|-|.+|.++ ..|..
T Consensus 229 ~fr~m~~Lq~l~LenNPLq-SPPAq 252 (722)
T KOG0532|consen 229 DFRKMRHLQVLQLENNPLQ-SPPAQ 252 (722)
T ss_pred hhhhhhhheeeeeccCCCC-CChHH
Confidence 6666666666666666665 44443
No 34
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.18 E-value=2.3e-11 Score=120.96 Aligned_cols=85 Identities=25% Similarity=0.407 Sum_probs=72.4
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH--------------------------
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM-------------------------- 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~-------------------------- 575 (690)
.+|.....||+|+||+||||+.. +|..||||.+.... .+..+-...|+.++
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 44555566999999999999986 57899999997663 33455577888877
Q ss_pred --------------------------------------------------------------------------------
Q 042662 576 -------------------------------------------------------------------------------- 575 (690)
Q Consensus 576 -------------------------------------------------------------------------------- 575 (690)
T Consensus 90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~ 169 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS 169 (429)
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh
Confidence
Q ss_pred -------------HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 -------------KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 -------------pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||..+.++++.|+|.||.|++|+|++||+.|++.
T Consensus 170 ~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 170 MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 9999999999999999999999999999999984
No 35
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.18 E-value=3.3e-11 Score=126.32 Aligned_cols=44 Identities=27% Similarity=0.400 Sum_probs=36.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCccCCCcccHHHHH
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDEVFSGEMTLKRWV 621 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~~~~~~~~l~~~~ 621 (690)
||...++.+|.|+|||||||+++|+.+ |..|+.+.. ...+..|+
T Consensus 331 PEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~--~~~v~~kI 375 (474)
T KOG0194|consen 331 PETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK--NYEVKAKI 375 (474)
T ss_pred hhhhccCccccccchhheeeeEEeeeccCCCCCCCCC--HHHHHHHH
Confidence 999999999999999999999999999 888987432 22345555
No 36
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.17 E-value=1.4e-11 Score=126.54 Aligned_cols=34 Identities=29% Similarity=0.480 Sum_probs=32.5
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||++....+++|.||||||||||||+||.-||.+
T Consensus 280 PEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkd 313 (904)
T KOG4721|consen 280 PEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKD 313 (904)
T ss_pred HHHhhcCCcccccceehhHHHHHHHHhcCCCccc
Confidence 9999999999999999999999999999999854
No 37
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.17 E-value=1.9e-11 Score=128.47 Aligned_cols=45 Identities=29% Similarity=0.446 Sum_probs=37.8
Q ss_pred cEecccCceeEEEEEeC--CC--cEEEEEEecccccc-hHHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARIH--DG--MEAAVKVFDLQYRG-AFKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~--~~--~~vavk~~~~~~~~-~~~~f~~e~~~~ 575 (690)
++||+|+||.|++|.|. +| ..||||.+..+... ....|.+|+..|
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M 165 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHM 165 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHH
Confidence 66999999999999984 34 56999999887754 678899999887
No 38
>PHA02988 hypothetical protein; Provisional
Probab=99.17 E-value=1.8e-10 Score=117.26 Aligned_cols=58 Identities=17% Similarity=0.197 Sum_probs=42.7
Q ss_pred cccchhhHhhhccCCCCcccEecccCceeEEEEEeCCCcEEEEEEecccccch---HHHHHHHHHHH
Q 042662 512 QKRFTYLELFQATNGFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGA---FKSFDIECDMM 575 (690)
Q Consensus 512 ~~~~~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~---~~~f~~e~~~~ 575 (690)
.+.++.+++... ....||+|++|.||+|.+ +|..||||++....... .+.|.+|++.+
T Consensus 12 ~~~i~~~~i~~~-----~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l 72 (283)
T PHA02988 12 IKCIESDDIDKY-----TSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNL 72 (283)
T ss_pred ceecCHHHcCCC-----CCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHH
Confidence 344566666332 336899999999999999 78999999987544322 46688888877
No 39
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.15 E-value=5.7e-11 Score=127.16 Aligned_cols=180 Identities=39% Similarity=0.596 Sum_probs=84.8
Q ss_pred CCCCCCEEECCCCcCcccchhhhcCCC-CCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCe
Q 042662 219 NLTNLIAIYLGRNKLNGSIPIALGKLK-KLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRK 297 (690)
Q Consensus 219 ~l~~L~~L~l~~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 297 (690)
.++.++.+++.+|.++ .++....... +|+.|++++|++. .+|..+..+++|+.|+++.|+
T Consensus 114 ~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~----------------- 174 (394)
T COG4886 114 ELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFND----------------- 174 (394)
T ss_pred cccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCch-----------------
Confidence 3345555555555555 2333333332 5555555555544 233334444455555555554
Q ss_pred eeCCCCccCcccccccccCCCceeeccCCcccCCCCCCccCCcccceeeccccccccccCccccCCCCCCeeeccCcccc
Q 042662 298 LYLGSNQLTSIPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQ 377 (690)
Q Consensus 298 L~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 377 (690)
++.+|......+.|+.|++++|++. .+|........|++|.+++|.+. ..+..+..+..+..+.+.+|++.
T Consensus 175 -------l~~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~ 245 (394)
T COG4886 175 -------LSDLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE 245 (394)
T ss_pred -------hhhhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee
Confidence 4444443334444444444444444 33333333334555555555322 23333444555555555555544
Q ss_pred ccCCcccCCCCCCCEEECcCCcCcccCChhhhcCCCCCEEEcCCCcCcccCC
Q 042662 378 GSIPNSIGDLISLKSLNLSNNNLSGTIPISLEKLLDLKEINVSFNNLEGEIP 429 (690)
Q Consensus 378 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~l~ls~n~l~~~~p 429 (690)
.++..++.+++++.|++++|.++...+ +..+.+++.+++++|.+....|
T Consensus 246 -~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 246 -DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred -eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccch
Confidence 224445555555555555555553222 4555555556665555554433
No 40
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.13 E-value=5.3e-11 Score=123.31 Aligned_cols=45 Identities=24% Similarity=0.426 Sum_probs=38.3
Q ss_pred ccEecccCceeEEEEEeCC-CcEEEEEEecccccchHHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
.+.+|-|-||.||.|+|.. ...||||.++.+.. ...+|.+|..+|
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvM 317 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVM 317 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHH
Confidence 4789999999999999964 57899999987654 467899998887
No 41
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.13 E-value=1.5e-10 Score=118.13 Aligned_cols=34 Identities=29% Similarity=0.452 Sum_probs=29.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+...+.++.|+|||||||+++||+||+.|...
T Consensus 179 PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 179 VECLKENKFSYASDVWSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred HhHhcccCCCcccccHHHHHHHHHHHhCCCCCCC
Confidence 6666677889999999999999999999999653
No 42
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.13 E-value=6.5e-11 Score=126.73 Aligned_cols=197 Identities=35% Similarity=0.524 Sum_probs=128.3
Q ss_pred EEEccCCcCCCCCChhhhhccccCcEEEeecCcccccCcccccCCC-CCCEEECCCCcCcccchhhhcCCCCCCEEeCcC
Q 042662 176 YFGFYNNPLGGILPRAIGNLSQSMEDFQMHNCNISGSIPEEISNLT-NLIAIYLGRNKLNGSIPIALGKLKKLQLLSLED 254 (690)
Q Consensus 176 ~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~ 254 (690)
.+.+..+.+...+. .+.... .++.|++.+|+++ .++....... +|+.|++++|.+. .+|..+..+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~-~~~~~~-~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNIS-ELLELT-NLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCch-hhhccc-ceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 57777776643322 233333 7999999999998 6666677774 9999999999998 5666789999999999999
Q ss_pred CcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccccccccCCCceeeccCCcccCCCCC
Q 042662 255 NQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPSTLWNLKDILHLNLSSNSFTGPLPL 334 (690)
Q Consensus 255 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~~ 334 (690)
|++. .+|...+..+.|+.|++++|++... |........|+++.+++|.+...+..+..+..+..+.+.+|++.. +
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~~l-~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~-~-- 247 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKISDL-PPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLED-L-- 247 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccccC-chhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeee-c--
Confidence 9998 4555444677777788888777643 333333445777777777655555555555555555555555442 1
Q ss_pred CccCCcccceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCcCcccCC
Q 042662 335 KIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGTIP 405 (690)
Q Consensus 335 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p 405 (690)
+..++.++.+++|++++|.++.. +. ++.+.+++.||+++|.++...|
T Consensus 248 ----------------------~~~~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 248 ----------------------PESIGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred ----------------------cchhccccccceecccccccccc-cc-ccccCccCEEeccCccccccch
Confidence 33344455555555555555422 22 5555566666666665554443
No 43
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.12 E-value=3.2e-10 Score=114.46 Aligned_cols=51 Identities=31% Similarity=0.386 Sum_probs=39.2
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
++|.-.+.||+|+||.||+|... +|..||+|.+.... ....+.+..|++.+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l 56 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLL 56 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHH
Confidence 56777789999999999999987 78999999875321 22345677787766
No 44
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=7e-12 Score=125.29 Aligned_cols=163 Identities=20% Similarity=0.203 Sum_probs=79.8
Q ss_pred CCCCCCeEecccCcccccCC-ccccCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChhhhhc
Q 042662 117 NASKLFTLGLEENSFSGFIP-NTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIGNL 195 (690)
Q Consensus 117 ~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~ 195 (690)
++++|+.+.|.++....... .....|++++.|||+.|-+.... +.......+++|+.|+++.|.+...........
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~---~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWF---PVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHH---HHHHHHHhcccchhcccccccccCCccccchhh
Confidence 44556666666655542211 23445666666666666544322 111334455666666666665544333333323
Q ss_pred cccCcEEEeecCccccc-CcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccC-CccccCCCCCCE
Q 042662 196 SQSMEDFQMHNCNISGS-IPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSI-PDNLCGLAALFQ 273 (690)
Q Consensus 196 ~~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~ 273 (690)
.++|+.|.++.|+++.. +...+..+|+|..|++..|..-..-.....-+..|+.|+|++|.+.... -...+.++.|+.
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhh
Confidence 33666666666666532 1122344566666666666422222223334455666666666554221 122344555555
Q ss_pred EEeeCCcCc
Q 042662 274 LDLGGNKLC 282 (690)
Q Consensus 274 L~L~~n~l~ 282 (690)
|+++.+++.
T Consensus 276 Lnls~tgi~ 284 (505)
T KOG3207|consen 276 LNLSSTGIA 284 (505)
T ss_pred hhccccCcc
Confidence 555555544
No 45
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.11 E-value=1.3e-10 Score=120.42 Aligned_cols=50 Identities=30% Similarity=0.395 Sum_probs=37.1
Q ss_pred CCCcccEecccCceeEEEEEeC-CCc----EEEEEEecccc-cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGM----EAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~----~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
+|...+.||+|+||.||+|++. +|. .||||++.... ....++|..|+..+
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l 63 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 63 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHH
Confidence 4777789999999999999864 333 48999986443 23456788887766
No 46
>PLN03150 hypothetical protein; Provisional
Probab=99.09 E-value=1.4e-10 Score=129.86 Aligned_cols=113 Identities=37% Similarity=0.546 Sum_probs=104.5
Q ss_pred CCceeeccCCcccCCCCCCccCCcccceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECc
Q 042662 317 DILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLS 396 (690)
Q Consensus 317 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls 396 (690)
.++.|+|++|.+.|.+|..++.+++|+.|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|..++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcccCChhhhcC-CCCCEEEcCCCcCcccCC
Q 042662 397 NNNLSGTIPISLEKL-LDLKEINVSFNNLEGEIP 429 (690)
Q Consensus 397 ~n~l~~~~p~~l~~l-~~L~~l~ls~n~l~~~~p 429 (690)
+|.++|.+|..+... .++..+++.+|...|..|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999988764 467789999998776554
No 47
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.09 E-value=1.4e-10 Score=116.59 Aligned_cols=45 Identities=29% Similarity=0.459 Sum_probs=36.6
Q ss_pred cEecccCceeEEEEEeC-----CCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARIH-----DGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~-----~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
+.||.|.||.||+|++. .+..|+||.+..... ...++|.+|++.+
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l 55 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQIL 55 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccc
Confidence 67999999999999996 257899999966433 2467899999877
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.07 E-value=2.8e-10 Score=116.13 Aligned_cols=34 Identities=12% Similarity=0.261 Sum_probs=31.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++.++.++|||||||+++||+||+.|++.
T Consensus 170 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 203 (285)
T cd05631 170 PEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRK 203 (285)
T ss_pred HhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCC
Confidence 8988888999999999999999999999999864
No 49
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.05 E-value=2.1e-10 Score=115.86 Aligned_cols=52 Identities=25% Similarity=0.516 Sum_probs=38.9
Q ss_pred cCCCCcccEecccCceeEEEEEeCC-C---cEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 524 TNGFSENNLIGRGGFGSVYKARIHD-G---MEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 524 t~~f~~~~~ig~g~~g~vy~~~l~~-~---~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
+++|...+.||+|+||.||+|+... + ..+|||++.... ....++|..|++.+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l 60 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIM 60 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHH
Confidence 3467778999999999999999852 3 379999986543 23355688888766
No 50
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=3.3e-11 Score=120.53 Aligned_cols=159 Identities=25% Similarity=0.240 Sum_probs=77.2
Q ss_pred CCCCCCEEECCCCcCcccch-hhhcCCCCCCEEeCcCCcCccc--CCccccCCCCCCEEEeeCCcCcccCcc-cccCCCC
Q 042662 219 NLTNLIAIYLGRNKLNGSIP-IALGKLKKLQLLSLEDNQLEGS--IPDNLCGLAALFQLDLGGNKLCGFIPA-CSGNLTN 294 (690)
Q Consensus 219 ~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~ 294 (690)
++.+|+.+.|++..+....- .....|++++.|+|+.|-+... +......+++|+.|+|+.|++.-.... .-..++.
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 44555555555555441110 2334555666666666544421 112233456666666666655432221 1123456
Q ss_pred CCeeeCCCCccCc--ccccccccCCCceeeccCCcccCCCCCCccCCcccceeecccccccccc-CccccCCCCCCeeec
Q 042662 295 LRKLYLGSNQLTS--IPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFSGVI-PTKIGGLKDLQYLFL 371 (690)
Q Consensus 295 L~~L~L~~n~l~~--~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L 371 (690)
|+.|.|+.|.++. +-..+..+|+|..|+|..|.....-......+..|+.|||++|++-... -...+.++.|..|++
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 6666666666654 3333445566666666666422222222333455566666665554221 122345555555555
Q ss_pred cCcccc
Q 042662 372 EYNRLQ 377 (690)
Q Consensus 372 ~~n~l~ 377 (690)
+.|.+.
T Consensus 279 s~tgi~ 284 (505)
T KOG3207|consen 279 SSTGIA 284 (505)
T ss_pred cccCcc
Confidence 555554
No 51
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.05 E-value=2.6e-10 Score=114.79 Aligned_cols=50 Identities=24% Similarity=0.317 Sum_probs=39.8
Q ss_pred CCCCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
++|.-.+.||+|++|.||+|...++..||||.+..... ..++|.+|++.+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l 55 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIM 55 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHH
Confidence 34666688999999999999988888999999865432 356788888766
No 52
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.05 E-value=2.1e-10 Score=116.94 Aligned_cols=46 Identities=26% Similarity=0.403 Sum_probs=36.1
Q ss_pred ccEecccCceeEEEEEeC-----CCcEEEEEEecccccc-hHHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIH-----DGMEAAVKVFDLQYRG-AFKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~-----~~~~vavk~~~~~~~~-~~~~f~~e~~~~ 575 (690)
.+.||+|+||.||+|++. .+..||||++...... ..+.|..|++.+
T Consensus 9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l 60 (284)
T cd05038 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEIL 60 (284)
T ss_pred heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHH
Confidence 367999999999999974 3678999998755443 456788888766
No 53
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.05 E-value=3.2e-10 Score=114.57 Aligned_cols=57 Identities=21% Similarity=0.254 Sum_probs=46.1
Q ss_pred HhhhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 519 ELFQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 519 ~l~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|++.+|++++....||+|+||.||+|... ++..||||.+........+.|.+|++++
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l 59 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALH 59 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999965 5788999988765544556777887766
No 54
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.04 E-value=1.9e-11 Score=119.12 Aligned_cols=85 Identities=21% Similarity=0.303 Sum_probs=37.4
Q ss_pred cCcEEEeecCccccc----CcccccCCCCCCEEECCCCcCccc----chhhhcCCCCCCEEeCcCCcCccc----CCccc
Q 042662 198 SMEDFQMHNCNISGS----IPEEISNLTNLIAIYLGRNKLNGS----IPIALGKLKKLQLLSLEDNQLEGS----IPDNL 265 (690)
Q Consensus 198 ~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~l~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~----~~~~~ 265 (690)
.|+.+...+|++... +...+...+.|+.+.+..|.|... +..+|..|++|+.|||.+|.++.. +...+
T Consensus 158 ~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL 237 (382)
T KOG1909|consen 158 KLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKAL 237 (382)
T ss_pred ceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHh
Confidence 445555555544321 122233444555555555544311 223344555555555555554421 22233
Q ss_pred cCCCCCCEEEeeCCcCc
Q 042662 266 CGLAALFQLDLGGNKLC 282 (690)
Q Consensus 266 ~~l~~L~~L~L~~n~l~ 282 (690)
..+++|+.|++++|.+.
T Consensus 238 ~s~~~L~El~l~dcll~ 254 (382)
T KOG1909|consen 238 SSWPHLRELNLGDCLLE 254 (382)
T ss_pred cccchheeecccccccc
Confidence 44445555555555443
No 55
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.03 E-value=4.6e-10 Score=113.28 Aligned_cols=51 Identities=24% Similarity=0.378 Sum_probs=38.8
Q ss_pred CCCCcccEecccCceeEEEEEeCC----CcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIHD----GMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~~----~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
++|...+.||+|+||.||+|++.. ...||||++.... .....+|.+|+..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l 59 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIM 59 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHH
Confidence 457777899999999999999853 3579999986543 23355788888776
No 56
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.03 E-value=1.3e-09 Score=107.65 Aligned_cols=90 Identities=24% Similarity=0.312 Sum_probs=75.1
Q ss_pred cchhhHhhhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-cchHHHHHHHHHHH----------------
Q 042662 514 RFTYLELFQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-RGAFKSFDIECDMM---------------- 575 (690)
Q Consensus 514 ~~~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-~~~~~~f~~e~~~~---------------- 575 (690)
.++.+|+... ..||+|..|+|||+... +++..|.|.+.... ..-.++..+|++++
T Consensus 75 ~i~~~dle~~-------~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLERL-------GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhhhh-------hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 4566677655 77999999999999985 58899999995443 23356778888877
Q ss_pred --------------------------------------------------------------------------------
Q 042662 576 -------------------------------------------------------------------------------- 575 (690)
Q Consensus 576 -------------------------------------------------------------------------------- 575 (690)
T Consensus 148 ~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~ 227 (364)
T KOG0581|consen 148 SNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSG 227 (364)
T ss_pred eCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccH
Confidence
Q ss_pred ------------------HhcccCCcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 ------------------KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 ------------------pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||=..+..++.++||||||+.++|+.+||-|+-..
T Consensus 228 ~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 228 ILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred HhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence 99999999999999999999999999999998754
No 57
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.02 E-value=7.2e-10 Score=113.06 Aligned_cols=49 Identities=27% Similarity=0.430 Sum_probs=38.2
Q ss_pred CCcccEecccCceeEEEEEeC-----CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-----DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-----~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|.-...||+|+||.||+|... ++..||||++........+.|..|++.+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l 59 (284)
T cd05081 6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEIL 59 (284)
T ss_pred ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHH
Confidence 444578999999999999853 5789999998765555566788888766
No 58
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.02 E-value=1.4e-09 Score=109.66 Aligned_cols=51 Identities=29% Similarity=0.383 Sum_probs=38.0
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
++|.-.+.||+|+||.||+|+.. +|..||||++.... ......|.+|++.+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l 56 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLL 56 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHH
Confidence 35666688999999999999974 68999999875322 22345678887776
No 59
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.01 E-value=1.5e-11 Score=119.72 Aligned_cols=188 Identities=19% Similarity=0.186 Sum_probs=95.1
Q ss_pred ccCCCCCCEEECCCCcCcccchhh----hcCCCCCCEEeCcCCcCcccCCc-------------cccCCCCCCEEEeeCC
Q 042662 217 ISNLTNLIAIYLGRNKLNGSIPIA----LGKLKKLQLLSLEDNQLEGSIPD-------------NLCGLAALFQLDLGGN 279 (690)
Q Consensus 217 l~~l~~L~~L~l~~n~l~~~~p~~----l~~l~~L~~L~L~~n~l~~~~~~-------------~~~~l~~L~~L~L~~n 279 (690)
+-.++.|+.|+||+|.+.-..+.. +.++..|++|.|.+|.+.-.-.. ..+.-+.|+.+....|
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRN 167 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecc
Confidence 334556777777777665333332 34566677777776655421111 1122344445554444
Q ss_pred cCccc----CcccccCCCCCCeeeCCCCccCc--ccccccccCCCceeeccCCcccCCCCCCccCCcccceeeccccccc
Q 042662 280 KLCGF----IPACSGNLTNLRKLYLGSNQLTS--IPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFS 353 (690)
Q Consensus 280 ~l~~~----~~~~~~~l~~L~~L~L~~n~l~~--~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 353 (690)
++... +...|...+.|+.+.++.|.+.. +- .+...+..+++|+.|||..|-++
T Consensus 168 rlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~---------------------al~eal~~~~~LevLdl~DNtft 226 (382)
T KOG1909|consen 168 RLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVT---------------------ALAEALEHCPHLEVLDLRDNTFT 226 (382)
T ss_pred ccccccHHHHHHHHHhccccceEEEecccccCchhH---------------------HHHHHHHhCCcceeeecccchhh
Confidence 44321 12233334444444444444332 10 11122334455555555555443
Q ss_pred cc----cCccccCCCCCCeeeccCccccccCCccc-----CCCCCCCEEECcCCcCccc----CChhhhcCCCCCEEEcC
Q 042662 354 GV----IPTKIGGLKDLQYLFLEYNRLQGSIPNSI-----GDLISLKSLNLSNNNLSGT----IPISLEKLLDLKEINVS 420 (690)
Q Consensus 354 ~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~l-----~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~l~ls 420 (690)
.. +...+..+++|+.|++++|.+...-..++ ...++|+.|++.+|.++.. +.......+.|..|+++
T Consensus 227 ~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLn 306 (382)
T KOG1909|consen 227 LEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLN 306 (382)
T ss_pred hHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCC
Confidence 22 22334455667777777776653322111 2357778888888877642 22334557778888888
Q ss_pred CCcCc
Q 042662 421 FNNLE 425 (690)
Q Consensus 421 ~n~l~ 425 (690)
+|.+.
T Consensus 307 gN~l~ 311 (382)
T KOG1909|consen 307 GNRLG 311 (382)
T ss_pred ccccc
Confidence 88873
No 60
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.01 E-value=1.2e-09 Score=109.84 Aligned_cols=48 Identities=23% Similarity=0.374 Sum_probs=37.1
Q ss_pred CCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|.-.+.||+|+||.||+|...++..||+|++..... ..+.|..|+..+
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l 55 (261)
T cd05072 8 IKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLM 55 (261)
T ss_pred eEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHH
Confidence 444578999999999999998888999998765332 345677777766
No 61
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=98.98 E-value=2.1e-09 Score=110.86 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=27.5
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCC--CCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRK--KPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~--~p~~ 608 (690)
||+..++.++.++|||||||+++||+++. .|+.
T Consensus 209 PE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 243 (304)
T cd05096 209 WECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG 243 (304)
T ss_pred HHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence 77777788999999999999999999854 4543
No 62
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.98 E-value=9.1e-10 Score=115.10 Aligned_cols=84 Identities=24% Similarity=0.329 Sum_probs=69.6
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH--------------------------
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM-------------------------- 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~-------------------------- 575 (690)
+|.-...||+|+||.||+|+.. +|..||||++.... ....+.+..|++++
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 4556688999999999999986 48899999986432 22345677787766
Q ss_pred --------------------------------------------------------------------------------
Q 042662 576 -------------------------------------------------------------------------------- 575 (690)
Q Consensus 576 -------------------------------------------------------------------------------- 575 (690)
T Consensus 82 ~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt 161 (333)
T cd05600 82 YVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGS 161 (333)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccC
Confidence
Q ss_pred -----HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 -----KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 -----pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|++.
T Consensus 162 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 200 (333)
T cd05600 162 PDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSG 200 (333)
T ss_pred ccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCC
Confidence 8988888999999999999999999999999864
No 63
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=98.98 E-value=6.4e-10 Score=111.07 Aligned_cols=44 Identities=30% Similarity=0.483 Sum_probs=35.2
Q ss_pred EecccCceeEEEEEeCCCcEEEEEEecccccc-hHHHHHHHHHHH
Q 042662 532 LIGRGGFGSVYKARIHDGMEAAVKVFDLQYRG-AFKSFDIECDMM 575 (690)
Q Consensus 532 ~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~-~~~~f~~e~~~~ 575 (690)
+||+|+||.||+|...++..||+|.+...... ....|.+|++.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l 46 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARIL 46 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHH
Confidence 68999999999999988999999998654432 234688888766
No 64
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=98.98 E-value=1.6e-09 Score=109.35 Aligned_cols=49 Identities=14% Similarity=0.314 Sum_probs=37.3
Q ss_pred CCcccEecccCceeEEEEEeC----CCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH----DGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~----~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
|.-.+.||+|+||.||+|++. .+..||+|.++.... .....|.+|+..+
T Consensus 7 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l 60 (266)
T cd05064 7 IKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTL 60 (266)
T ss_pred eEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 445578999999999999863 357899999876532 2345788888877
No 65
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.97 E-value=8.2e-11 Score=111.89 Aligned_cols=135 Identities=24% Similarity=0.246 Sum_probs=103.3
Q ss_pred ccCCCCCCeeeCCCCccCcccccccccCCCceeeccCCcccCCCCCCccCCcccceeeccccccccccCccccCCCCCCe
Q 042662 289 SGNLTNLRKLYLGSNQLTSIPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQY 368 (690)
Q Consensus 289 ~~~l~~L~~L~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 368 (690)
......|+++|||+|.++.+.++..-.|.++.|++++|.+... ..+..+++|+.||||+|.++. +..+-..+.+.++
T Consensus 280 ~dTWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKt 356 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKT 356 (490)
T ss_pred cchHhhhhhccccccchhhhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHh-hhhhHhhhcCEee
Confidence 3345678899999999999888888888999999999998732 237778899999999998873 3344445678888
Q ss_pred eeccCccccccCCcccCCCCCCCEEECcCCcCccc-CChhhhcCCCCCEEEcCCCcCcccC
Q 042662 369 LFLEYNRLQGSIPNSIGDLISLKSLNLSNNNLSGT-IPISLEKLLDLKEINVSFNNLEGEI 428 (690)
Q Consensus 369 L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~-~p~~l~~l~~L~~l~ls~n~l~~~~ 428 (690)
|.|++|.+... ..++.+-+|..||+++|++... ....++++|.|+.+.+.+|++.+.+
T Consensus 357 L~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 357 LKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred eehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 99999887522 4567778889999999988743 2245778888888888888887654
No 66
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.97 E-value=1.3e-09 Score=113.32 Aligned_cols=34 Identities=18% Similarity=0.308 Sum_probs=31.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++.++.++|||||||+++||+||+.|++.
T Consensus 170 PE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~ 203 (323)
T cd05616 170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 203 (323)
T ss_pred HHHhcCCCCCCccchhchhHHHHHHHhCCCCCCC
Confidence 8988888999999999999999999999999864
No 67
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.97 E-value=4.1e-10 Score=128.76 Aligned_cols=129 Identities=27% Similarity=0.254 Sum_probs=76.2
Q ss_pred CCCCEEEccCCcCCccCCccccCCCCCCEEECcCCc--ccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCCCEE
Q 042662 10 AELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNS--LTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTLKSL 87 (690)
Q Consensus 10 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~--l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 87 (690)
...|+..+-+|.+. .++.+. .++.|++|-+.+|. +....+..|..++.|++|||++|.--+.+|..++.+-+||+|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 45566666666654 333322 33467777777764 332333335667777777777766556677777766654444
Q ss_pred ecCCCCCCCCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCc
Q 042662 88 YLHNVRLPNLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNY 154 (690)
Q Consensus 88 ~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 154 (690)
++++ +.+. .+|.++.++..|.+|++..+.....+|.....+++|++|.+..-.
T Consensus 601 ~L~~-------------t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 601 DLSD-------------TGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccC-------------CCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 4333 3333 556677777777777777666544455555567777777766543
No 68
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=98.96 E-value=2.4e-09 Score=107.78 Aligned_cols=48 Identities=23% Similarity=0.367 Sum_probs=36.8
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|...+.||+|+||.||+|... .+..||+|++.... ....+|.+|++.+
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l 56 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVM 56 (263)
T ss_pred eEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHH
Confidence 555678999999999999975 47889999886543 2345677887766
No 69
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=98.96 E-value=4.9e-10 Score=112.68 Aligned_cols=51 Identities=20% Similarity=0.359 Sum_probs=40.2
Q ss_pred CCCCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
.+|.-.+.||.|+||.||+|...++..||+|.+..........+..|+..+
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l 56 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQAL 56 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHH
Confidence 345555789999999999999988999999998765544456677777665
No 70
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.95 E-value=1.4e-09 Score=113.32 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=31.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|++.
T Consensus 170 PE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (324)
T cd05587 170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 203 (324)
T ss_pred hhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 8888888899999999999999999999999863
No 71
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=98.95 E-value=2.8e-09 Score=106.83 Aligned_cols=48 Identities=21% Similarity=0.271 Sum_probs=37.3
Q ss_pred CCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|.-...||+|+||.||+|.+.++..+|+|.+.... .....|..|++.+
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l 53 (256)
T cd05114 6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVM 53 (256)
T ss_pred cEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHH
Confidence 44446799999999999999888899999876432 2345788888776
No 72
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=98.95 E-value=2e-09 Score=111.45 Aligned_cols=121 Identities=21% Similarity=0.293 Sum_probs=90.4
Q ss_pred ccEecccCceeEEEEEeCCCcEEEEEEecccccch-HHHHHHHHHHH---------------------------------
Q 042662 530 NNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGA-FKSFDIECDMM--------------------------------- 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~-~~~f~~e~~~~--------------------------------- 575 (690)
.+.||+|-||.|..+....+..||||+++...... .++|.+|++.|
T Consensus 543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDL 622 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDL 622 (807)
T ss_pred hhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcH
Confidence 35699999999999999888999999998877544 58999999988
Q ss_pred --------------------------------------------------------------------------------
Q 042662 576 -------------------------------------------------------------------------------- 575 (690)
Q Consensus 576 -------------------------------------------------------------------------------- 575 (690)
T Consensus 623 nqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlp 702 (807)
T KOG1094|consen 623 NQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLP 702 (807)
T ss_pred HHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeee
Confidence
Q ss_pred -----HhcccCCcccccceEEehhHHHHHHhc--CCCCCCccCCCcccHHHHHHhhCCCCccccccccccCCcccccccH
Q 042662 576 -----KQYGREGRVSTNGDVYSFGIMLMETFT--RKKPTDEVFSGEMTLKRWVNDFLPISVMEVVDTNLLSQEDKHFTTK 648 (690)
Q Consensus 576 -----pe~~~~~~~~~k~DvysfGv~llel~t--g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~~ 648 (690)
+|...-|++|+++|||+|||.|||+++ ..+|+.....+ .+++-...++++.-..++=++ +.
T Consensus 703 iRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~~~~~~~~~~~l~~-----P~----- 770 (807)
T KOG1094|consen 703 IRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGEFFRDQGRQVVLSR-----PP----- 770 (807)
T ss_pred eeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhhhcCCCCcceeccC-----CC-----
Confidence 788888999999999999999999876 77898754432 345555555554322222111 11
Q ss_pred HHHHHHHHHHhcch
Q 042662 649 EQFMKVIDANLLTR 662 (690)
Q Consensus 649 ~~~~~~~~~al~C~ 662 (690)
.+-..+.++-+.|.
T Consensus 771 ~cp~~lyelml~Cw 784 (807)
T KOG1094|consen 771 ACPQGLYELMLRCW 784 (807)
T ss_pred cCcHHHHHHHHHHh
Confidence 23346778889998
No 73
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.95 E-value=2.9e-09 Score=106.79 Aligned_cols=34 Identities=35% Similarity=0.623 Sum_probs=30.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..++.++.++|||||||+++|++| |+.|++.
T Consensus 167 PE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~ 201 (257)
T cd05060 167 PECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGE 201 (257)
T ss_pred HHHhcCCCCCccchHHHHHHHHHHHHcCCCCCccc
Confidence 788778889999999999999999998 9999864
No 74
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.95 E-value=1.6e-10 Score=110.00 Aligned_cols=135 Identities=27% Similarity=0.325 Sum_probs=97.8
Q ss_pred ccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccccccccCCCceeeccCCcccCCCCCCccCCcccce
Q 042662 265 LCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQ 344 (690)
Q Consensus 265 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 344 (690)
+..+..|+++||++|.++ .+.++..-.|.++.|++|.|.+..+.. +..+++|+.|||++|.++ .+...-..+.+.++
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKt 356 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKT 356 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeeehh-hhhcccceEeecccchhH-hhhhhHhhhcCEee
Confidence 334556778888888776 344556667788888888888877654 667788888888888776 33334445678888
Q ss_pred eeccccccccccCccccCCCCCCeeeccCccccccC-CcccCCCCCCCEEECcCCcCcccC
Q 042662 345 LDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSI-PNSIGDLISLKSLNLSNNNLSGTI 404 (690)
Q Consensus 345 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~Ls~n~l~~~~ 404 (690)
|.|++|.+... ..++.+-+|..||+++|++.... ...++++|.|+++.|.+|.+.+..
T Consensus 357 L~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 357 LKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred eehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 88888877522 34566778888999999886322 357889999999999999998543
No 75
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.95 E-value=4e-10 Score=103.35 Aligned_cols=128 Identities=28% Similarity=0.347 Sum_probs=38.5
Q ss_pred cCCCCCCCEEEccCCcCCccCCcccc-CCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccc-cCCCC
Q 042662 6 LGNLAELQKLWLDNNSLTGTIPSSIF-NLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAI-FNVST 83 (690)
Q Consensus 6 ~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~ 83 (690)
+.+...++.|+|.+|.++. +. .++ .+.+|+.|+|++|.++.. ..+..+++|++|++++|+++. +...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 3445567777777777773 32 344 466777777777777633 246667777777777777763 33333 24566
Q ss_pred CCEEecCCCCCCCCCEEeccCCccCccCCccccCCCCCCeEecccCcccccCC---ccccCCCCCCEEEc
Q 042662 84 LKSLYLHNVRLPNLEELLLWGNNFSGTIPSFIFNASKLFTLGLEENSFSGFIP---NTFGSLRNLEWLSL 150 (690)
Q Consensus 84 L~~L~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L 150 (690)
|+.|++++|++.++..+ ..+..+++|++|++.+|.++.... ..+..+++|+.||-
T Consensus 90 L~~L~L~~N~I~~l~~l------------~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 90 LQELYLSNNKISDLNEL------------EPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp --EEE-TTS---SCCCC------------GGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred CCEEECcCCcCCChHHh------------HHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 55555555555444321 234556677777777777653311 12345666666653
No 76
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.95 E-value=2.7e-09 Score=107.69 Aligned_cols=50 Identities=32% Similarity=0.441 Sum_probs=36.9
Q ss_pred CCCcccEecccCceeEEEEEe-CCCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||+|.. .+|..+|||.+.... .....+|..|++.+
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l 56 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 56 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHH
Confidence 455567899999999999996 478999999875422 22345677777766
No 77
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.94 E-value=2.4e-09 Score=108.99 Aligned_cols=51 Identities=18% Similarity=0.223 Sum_probs=37.0
Q ss_pred CCCCcccEecccCceeEEEEEeCC-----CcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIHD-----GMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~~-----~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
++|.-.++||+|+||.||+|...+ +..||+|++..... .....|..|+..+
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l 62 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLL 62 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHH
Confidence 456666889999999999999865 68899998864322 2244566666555
No 78
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.94 E-value=1.7e-09 Score=112.49 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=31.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++.++.++|||||||+++||+||+.|+..
T Consensus 170 PE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (323)
T cd05615 170 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 203 (323)
T ss_pred HHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCC
Confidence 8888888899999999999999999999999864
No 79
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=98.94 E-value=1.3e-09 Score=111.66 Aligned_cols=50 Identities=20% Similarity=0.205 Sum_probs=37.6
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||+|... +|..||||++.... ....+.+.+|++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l 55 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVL 55 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHH
Confidence 4556688999999999999975 58899999986432 12345577787766
No 80
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.94 E-value=1.3e-09 Score=109.57 Aligned_cols=35 Identities=20% Similarity=0.386 Sum_probs=32.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||+....-++.|+|+||+||...||.+|..|....
T Consensus 180 PEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~ 214 (467)
T KOG0201|consen 180 PEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL 214 (467)
T ss_pred hhhhccccccchhhhhhhhHHHHHHhcCCCCCccc
Confidence 99999889999999999999999999999997643
No 81
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=98.94 E-value=4.2e-09 Score=105.88 Aligned_cols=48 Identities=21% Similarity=0.334 Sum_probs=38.2
Q ss_pred CCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|.-.+.||+|+||.||+|...++..||||++..... ....|..|++.+
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l 55 (260)
T cd05067 8 LKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLM 55 (260)
T ss_pred ceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHH
Confidence 444578999999999999998899999999875433 345788888766
No 82
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.93 E-value=1.1e-09 Score=111.58 Aligned_cols=34 Identities=29% Similarity=0.507 Sum_probs=30.9
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+...+.++.|+|||||||+++||+| |+.|+..
T Consensus 195 PE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~ 229 (283)
T cd05048 195 PEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYG 229 (283)
T ss_pred HHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence 888888889999999999999999998 9999764
No 83
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.93 E-value=2.1e-09 Score=112.03 Aligned_cols=50 Identities=22% Similarity=0.324 Sum_probs=37.6
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++
T Consensus 19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l 72 (329)
T PTZ00263 19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSIL 72 (329)
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHH
Confidence 4555688999999999999985 57899999986432 22345677887766
No 84
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=98.93 E-value=3.8e-09 Score=105.89 Aligned_cols=48 Identities=29% Similarity=0.414 Sum_probs=38.5
Q ss_pred CCCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+|.-.+.+|+|+||.||+|.. .|+.||||++..... ..++|.+|+..+
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l 54 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVM 54 (256)
T ss_pred hccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHH
Confidence 455568899999999999997 478999999976544 456788888766
No 85
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=98.92 E-value=3.4e-09 Score=109.62 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=30.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+..++.++|||||||+++||+||+.|+.
T Consensus 162 PE~~~~~~~~~~~DvwslGvil~el~tg~~pf~ 194 (312)
T cd05585 162 PELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFY 194 (312)
T ss_pred HHHHcCCCCCCccceechhHHHHHHHhCCCCcC
Confidence 888888889999999999999999999999975
No 86
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.91 E-value=1.8e-09 Score=109.89 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=30.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..++.++.++|||||||+++|++| |+.|+..
T Consensus 180 pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 214 (279)
T cd05111 180 LESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG 214 (279)
T ss_pred HHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 888888889999999999999999999 9988764
No 87
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=98.91 E-value=2.7e-09 Score=108.51 Aligned_cols=34 Identities=35% Similarity=0.489 Sum_probs=30.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..++.++.++|||||||+++|++| |+.|+..
T Consensus 193 PE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~ 227 (280)
T cd05049 193 PESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYG 227 (280)
T ss_pred hhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 777777888999999999999999999 9999753
No 88
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.91 E-value=2.7e-09 Score=110.92 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=31.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|++.
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~ 198 (321)
T cd05591 165 PEILQELEYGPSVDWWALGVLMYEMMAGQPPFEA 198 (321)
T ss_pred HHHHcCCCCCCccceechhHHHHHHhcCCCCCCC
Confidence 8888888899999999999999999999999864
No 89
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=98.91 E-value=2.2e-09 Score=109.63 Aligned_cols=50 Identities=24% Similarity=0.295 Sum_probs=37.6
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||+|+.. ++..||||++.... ....+.+.+|++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l 54 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKML 54 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHH
Confidence 4566688999999999999985 57899999986432 22345677777766
No 90
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.91 E-value=7e-09 Score=104.99 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=29.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..+...+.++|||||||+++||+| |+.|...
T Consensus 184 pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~ 218 (273)
T cd05035 184 IESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPG 218 (273)
T ss_pred HhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 676667778999999999999999999 8888753
No 91
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.91 E-value=5.2e-09 Score=104.84 Aligned_cols=48 Identities=23% Similarity=0.262 Sum_probs=36.8
Q ss_pred CCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|.-...||+|+||.||+|...++..+|||.+..... ...+|..|++.+
T Consensus 6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l 53 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVM 53 (256)
T ss_pred eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHH
Confidence 334477999999999999987788999998864322 345688888766
No 92
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=98.91 E-value=2.6e-09 Score=107.41 Aligned_cols=46 Identities=26% Similarity=0.339 Sum_probs=36.7
Q ss_pred cccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 529 ENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 529 ~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
-.+.||+|+||.||+|...++..||+|.+..... ....|.+|++.+
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l 55 (260)
T cd05070 10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIM 55 (260)
T ss_pred hhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHH
Confidence 3467999999999999998888999999875433 345688887766
No 93
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=98.90 E-value=1.3e-09 Score=110.68 Aligned_cols=53 Identities=23% Similarity=0.374 Sum_probs=38.5
Q ss_pred ccCCCCcccEecccCceeEEEEEeCC------CcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 523 ATNGFSENNLIGRGGFGSVYKARIHD------GMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 523 at~~f~~~~~ig~g~~g~vy~~~l~~------~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
++++|.-.+.||+|+||.||+|...+ +..||+|...... ......|..|+..+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l 63 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIM 63 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 35567777899999999999999854 5678999875443 22345677777655
No 94
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=98.90 E-value=4.1e-09 Score=107.73 Aligned_cols=50 Identities=28% Similarity=0.434 Sum_probs=36.7
Q ss_pred CCCcccEecccCceeEEEEEe------CCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARI------HDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l------~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+|.-.+.+|+|+||.||++.. .++..+|||.+..........|..|++.+
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l 61 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 61 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHH
Confidence 455568899999999999985 23467999988665544455677777665
No 95
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.90 E-value=2.1e-09 Score=109.30 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=30.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||...++.++.++|||||||+++|++| |+.|++.
T Consensus 180 PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 180 LESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred HHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 788778889999999999999999999 8888764
No 96
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.90 E-value=2.1e-09 Score=110.03 Aligned_cols=81 Identities=22% Similarity=0.207 Sum_probs=52.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCccCCCcccHHHHHHhhCCCCccccccccccCCcccccccHHHHHHH
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDEVFSGEMTLKRWVNDFLPISVMEVVDTNLLSQEDKHFTTKEQFMKV 654 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~~~~~~~~ 654 (690)
||+..+..++.++|||||||+++||+| |+.|+..... ....++. ......+. .. .....+
T Consensus 194 PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~---~~~~~~~~-----~~---------~~~~~~ 254 (291)
T cd05094 194 PESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN--TEVIECI---TQGRVLER-----PR---------VCPKEV 254 (291)
T ss_pred hHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH---hCCCCCCC-----Cc---------cCCHHH
Confidence 888888888999999999999999999 9998753221 1122211 11111110 00 112246
Q ss_pred HHHHhcch----------HHHHHHHHhhhhh
Q 042662 655 IDANLLTR----------EDNYFMTKEQRVS 675 (690)
Q Consensus 655 ~~~al~C~----------~~v~~~L~~~~~~ 675 (690)
.++...|+ .+|+++|+++...
T Consensus 255 ~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 255 YDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 67777888 8899999888653
No 97
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.90 E-value=3e-09 Score=110.21 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=31.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|+..
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~ 198 (316)
T cd05592 165 PEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred HHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCC
Confidence 8888888899999999999999999999999863
No 98
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.89 E-value=1.7e-09 Score=118.61 Aligned_cols=33 Identities=33% Similarity=0.551 Sum_probs=30.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..++.++.|+|||||||+++||+||+.|++
T Consensus 214 PE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~ 246 (496)
T PTZ00283 214 PEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD 246 (496)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 888888889999999999999999999999986
No 99
>PTZ00284 protein kinase; Provisional
Probab=98.89 E-value=1.5e-09 Score=118.85 Aligned_cols=43 Identities=28% Similarity=0.278 Sum_probs=35.2
Q ss_pred hhHhhhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 517 YLELFQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 517 ~~~l~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
.+++...++.|...+.||+|+||+||+|... .+..||||+++.
T Consensus 121 ~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~ 164 (467)
T PTZ00284 121 GEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRN 164 (467)
T ss_pred CCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEec
Confidence 3455566788888899999999999999874 578899998853
No 100
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.89 E-value=2.3e-09 Score=111.87 Aligned_cols=51 Identities=22% Similarity=0.307 Sum_probs=39.5
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
++|.....||+|+||.||++... +|..||+|.+..... .....|.+|++.+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l 57 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL 57 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHH
Confidence 45666788999999999999975 578899998865432 2345688888877
No 101
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.89 E-value=3.4e-09 Score=111.10 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=30.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..+..++.|+|||||||+++||+| |+.|+..
T Consensus 245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~ 279 (338)
T cd05102 245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 279 (338)
T ss_pred cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCC
Confidence 777777888999999999999999997 9999753
No 102
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.89 E-value=5.6e-09 Score=105.52 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=30.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..++.++.++|||||||+++|++||+.|+.
T Consensus 182 Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~ 214 (269)
T cd08528 182 PEIVKNEPYGEKADVWAFGCILYQMCTLQPPFY 214 (269)
T ss_pred hhhhcCCCCchHHHHHHHHHHHHHHHhCCCccc
Confidence 888888889999999999999999999999975
No 103
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=98.88 E-value=3.2e-09 Score=110.43 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=30.9
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..++.++.++|||||||+++||+||+.|+.
T Consensus 164 PE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~ 196 (323)
T cd05595 164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (323)
T ss_pred cccccCCCCCchhchhhhHHHHHHHHhCCCCCC
Confidence 888888889999999999999999999999975
No 104
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=98.88 E-value=1.8e-09 Score=111.31 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=31.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||...++.++..+|.||.||+++|+.+|+.|+.
T Consensus 169 PElv~e~pyd~~sDlWslGcilYE~~~G~PPF~ 201 (808)
T KOG0597|consen 169 PELVEEQPYDHTSDLWSLGCILYELYVGQPPFY 201 (808)
T ss_pred HHHHcCCCccchhhHHHHHHHHHHHhcCCCCch
Confidence 999999999999999999999999999999976
No 105
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=98.88 E-value=2.9e-09 Score=111.40 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=31.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+...+.++|||||||+++||+||+.|+..
T Consensus 197 PE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 230 (340)
T PTZ00426 197 PEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA 230 (340)
T ss_pred HHHHhCCCCCccccccchhhHHHHHhcCCCCCCC
Confidence 8888888889999999999999999999999863
No 106
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=98.88 E-value=4.5e-09 Score=109.35 Aligned_cols=34 Identities=15% Similarity=0.204 Sum_probs=31.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+...+.++|||||||+++||+||+.|+..
T Consensus 169 PE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~ 202 (323)
T cd05584 169 PEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTA 202 (323)
T ss_pred hhhccCCCCCCcceecccHHHHHHHhcCCCCCCC
Confidence 8888888889999999999999999999999863
No 107
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.88 E-value=3.3e-09 Score=106.73 Aligned_cols=48 Identities=21% Similarity=0.317 Sum_probs=36.6
Q ss_pred CCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|.-...||+|+||.||+|+..++..||||++..... ...+|.+|++.+
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l 55 (262)
T cd05071 8 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVM 55 (262)
T ss_pred eeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHH
Confidence 444567999999999999987777899999875332 345678887766
No 108
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.88 E-value=9.9e-09 Score=105.39 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=29.9
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+| |+.|+..
T Consensus 187 PE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~ 221 (297)
T cd05089 187 IESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCG 221 (297)
T ss_pred chhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 777777788999999999999999998 9998753
No 109
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.87 E-value=7.9e-10 Score=126.45 Aligned_cols=84 Identities=30% Similarity=0.361 Sum_probs=66.2
Q ss_pred CCCCCCEEEccCCc--CCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCCC
Q 042662 8 NLAELQKLWLDNNS--LTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTLK 85 (690)
Q Consensus 8 ~l~~L~~L~Ls~n~--l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 85 (690)
+++.|++|-+..|. +....++.|..++.|++|||++|.=-+.+|..+++|.+||+|+++++.++ .+|..++++..|.
T Consensus 543 ~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~ 621 (889)
T KOG4658|consen 543 ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLI 621 (889)
T ss_pred CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhh
Confidence 45578888888886 44344444778999999999988655688999999999999999999888 7888898888877
Q ss_pred EEecCCC
Q 042662 86 SLYLHNV 92 (690)
Q Consensus 86 ~L~l~~~ 92 (690)
+|++..+
T Consensus 622 ~Lnl~~~ 628 (889)
T KOG4658|consen 622 YLNLEVT 628 (889)
T ss_pred eeccccc
Confidence 7766654
No 110
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.87 E-value=3.3e-09 Score=97.31 Aligned_cols=127 Identities=28% Similarity=0.359 Sum_probs=42.0
Q ss_pred cCCCCCCeEecccCcccccCCcccc-CCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChhhh-
Q 042662 116 FNASKLFTLGLEENSFSGFIPNTFG-SLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIG- 193 (690)
Q Consensus 116 ~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~- 193 (690)
.+..++++|+|.+|.|+.+ +.++ .+.+|+.|++++|.+... +.+..++.|+.|++++|.++.. +..+.
T Consensus 16 ~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l-------~~l~~L~~L~~L~L~~N~I~~i-~~~l~~ 85 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL-------EGLPGLPRLKTLDLSNNRISSI-SEGLDK 85 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S---------TT----TT--EEE--SS---S--CHHHHH
T ss_pred ccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc-------cCccChhhhhhcccCCCCCCcc-ccchHH
Confidence 4455677777777777643 2354 467777888888777654 4456667777777777777643 33333
Q ss_pred hccccCcEEEeecCcccccC-cccccCCCCCCEEECCCCcCcccc---hhhhcCCCCCCEEeCc
Q 042662 194 NLSQSMEDFQMHNCNISGSI-PEEISNLTNLIAIYLGRNKLNGSI---PIALGKLKKLQLLSLE 253 (690)
Q Consensus 194 ~~~~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~l~~n~l~~~~---p~~l~~l~~L~~L~L~ 253 (690)
.++ +|++|++++|++...- -..+..+++|+.|++.+|.++... ...+..+++|+.||-.
T Consensus 86 ~lp-~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 86 NLP-NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp H-T-T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred hCC-cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 344 7777777777775421 134566777777777777776321 1234566777776653
No 111
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.87 E-value=4.6e-09 Score=109.40 Aligned_cols=34 Identities=18% Similarity=0.343 Sum_probs=31.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|++.
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 165 PEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred HHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 8888888899999999999999999999999864
No 112
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=98.87 E-value=3.3e-09 Score=110.32 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=30.9
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||...+..++.++|||||||+++||+||+.|+.
T Consensus 164 PE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 196 (323)
T cd05571 164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (323)
T ss_pred hhhhcCCCCCccccCcccchhhhhhhcCCCCCC
Confidence 888888889999999999999999999999975
No 113
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=98.87 E-value=4.9e-09 Score=109.27 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=31.5
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|++.
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred HHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 8888888899999999999999999999999863
No 114
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=98.87 E-value=3.6e-09 Score=106.38 Aligned_cols=50 Identities=22% Similarity=0.338 Sum_probs=39.0
Q ss_pred CCCCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
++|.-.+.||+|+||.||+|...++..||||.+..... ..++|.+|++.+
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l 55 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIM 55 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHH
Confidence 34555678999999999999998888999999875432 345678887766
No 115
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.87 E-value=1.1e-08 Score=103.03 Aligned_cols=42 Identities=33% Similarity=0.654 Sum_probs=33.7
Q ss_pred ccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
.+.||+|.||.||+|.+ .|..||||++... .+++|.+|.++.
T Consensus 216 ~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIY 257 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIY 257 (513)
T ss_pred EEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHH
Confidence 46799999999999999 6788999999654 345677777655
No 116
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.86 E-value=4.6e-09 Score=109.64 Aligned_cols=50 Identities=26% Similarity=0.403 Sum_probs=35.1
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||++... ++..||||.+.... ......|..|+.++
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVL 55 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHH
Confidence 4566688999999999999975 57889999885421 12233455665544
No 117
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.86 E-value=4e-09 Score=109.26 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=31.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|+..
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~ 198 (316)
T cd05619 165 PEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred HHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC
Confidence 8888888899999999999999999999999863
No 118
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.86 E-value=3.4e-09 Score=109.19 Aligned_cols=82 Identities=12% Similarity=0.070 Sum_probs=52.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCccCCCcccHHHHHHhhCCCCccccccccccCCcccccccHHHHHHH
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDEVFSGEMTLKRWVNDFLPISVMEVVDTNLLSQEDKHFTTKEQFMKV 654 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~~~~~~~~ 654 (690)
||+..+..++.++|||||||+++|++| |+.|+.... ...+.+++.... ... .+ . .+...+
T Consensus 180 PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~--~~~---~~---~---------~~~~~~ 240 (303)
T cd05110 180 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLLEKGE--RLP---QP---P---------ICTIDV 240 (303)
T ss_pred HHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHCCC--CCC---CC---C---------CCCHHH
Confidence 777777888999999999999999998 888875321 122333332110 100 00 0 112345
Q ss_pred HHHHhcch----------HHHHHHHHhhhhhh
Q 042662 655 IDANLLTR----------EDNYFMTKEQRVSL 676 (690)
Q Consensus 655 ~~~al~C~----------~~v~~~L~~~~~~~ 676 (690)
.++...|+ .+++++++++....
T Consensus 241 ~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 241 YMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 66777787 78888888875443
No 119
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=98.86 E-value=4.8e-09 Score=110.49 Aligned_cols=50 Identities=32% Similarity=0.489 Sum_probs=37.8
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|...+.||+|+||.||+|... +|..||||++.... ......|..|++.+
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDIL 55 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHH
Confidence 4666688999999999999975 58999999986432 23345677777666
No 120
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.86 E-value=9.2e-09 Score=103.45 Aligned_cols=32 Identities=34% Similarity=0.583 Sum_probs=27.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPT 607 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~ 607 (690)
||+..++.++.|+|||||||+++||+||+.|.
T Consensus 171 PE~~~~~~~~~~~Di~slG~~l~el~~~~~~~ 202 (262)
T cd05058 171 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 202 (262)
T ss_pred hhHhccCccchHHHHHHHHHHHHHHHcCCCCC
Confidence 77777788899999999999999999976653
No 121
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=98.86 E-value=3e-09 Score=105.01 Aligned_cols=47 Identities=23% Similarity=0.231 Sum_probs=38.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCccCCCcccHHHHHHhhCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEVFSGEMTLKRWVNDFLPI 627 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~~~~~~~l~~~~~~~~~~ 627 (690)
||+..+..++..+|.||.||+++||+||..|+.. .+...|.+...++
T Consensus 194 PEil~~~gy~~~vDWWsLGillYeML~G~pPF~~-----~~~~~~~~~I~~~ 240 (357)
T KOG0598|consen 194 PEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA-----EDVKKMYDKILKG 240 (357)
T ss_pred hHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC-----ccHHHHHHHHhcC
Confidence 8888899999999999999999999999999863 3455555554443
No 122
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.86 E-value=2.8e-09 Score=106.52 Aligned_cols=44 Identities=32% Similarity=0.485 Sum_probs=34.2
Q ss_pred EecccCceeEEEEEeC-CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 532 LIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 532 ~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
.||+|+||.||+|+.. +|+.||+|...... ......|..|++.+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l 47 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARIL 47 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHH
Confidence 5899999999999985 68899999875433 23345688888776
No 123
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=98.86 E-value=5.2e-09 Score=109.04 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=30.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+..++.++|||||||+++||+||+.|+.
T Consensus 164 PE~~~~~~~~~~~DiwslGvil~elltG~~Pf~ 196 (328)
T cd05593 164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (328)
T ss_pred hhhhcCCCCCccCCccccchHHHHHhhCCCCCC
Confidence 888888889999999999999999999999975
No 124
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=98.86 E-value=8.2e-09 Score=104.31 Aligned_cols=49 Identities=29% Similarity=0.503 Sum_probs=36.4
Q ss_pred CCcccEecccCceeEEEEEeCC-C---cEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHD-G---MEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~-~---~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
+.-.+.||+|+||.||+|.... | ..||||.+.... ....++|..|++.+
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l 59 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 59 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 3345789999999999999753 2 369999986543 33456788888776
No 125
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.86 E-value=3e-09 Score=107.68 Aligned_cols=54 Identities=31% Similarity=0.463 Sum_probs=39.4
Q ss_pred hhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 521 FQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 521 ~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+.+++.|...+.||+|+||.||+|... +++.||||++.... .....+..|+..+
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l 56 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINML 56 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHH
Confidence 456777887889999999999999875 57899999885432 2234555665544
No 126
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.86 E-value=3e-09 Score=106.52 Aligned_cols=49 Identities=29% Similarity=0.459 Sum_probs=38.6
Q ss_pred CCCCcccEecccCceeEEEEEeCC-CcEEEEEEecccccchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
++|.....||+|+||.||+|...+ +..+|+|.+..... ..+|.+|++.+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~ 52 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISIL 52 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHH
Confidence 456667889999999999999875 78999999865432 56788887765
No 127
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.85 E-value=5.5e-09 Score=110.69 Aligned_cols=51 Identities=25% Similarity=0.393 Sum_probs=38.2
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
++|...+.||+|+||.||+|... +|+.||||++.... ......+..|++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il 55 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDIL 55 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH
Confidence 35667789999999999999975 58999999986432 22334567777766
No 128
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.85 E-value=5.3e-09 Score=108.58 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=31.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|+..
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (320)
T cd05590 165 PEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA 198 (320)
T ss_pred HHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 8888888889999999999999999999999863
No 129
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=98.85 E-value=6.3e-09 Score=108.52 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=31.5
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|++.
T Consensus 165 PE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred HHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 8888888899999999999999999999999863
No 130
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=98.85 E-value=5.4e-09 Score=106.64 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=31.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+...+.++|||||||+++|+++|+.|+..
T Consensus 170 PE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~ 203 (285)
T cd05605 170 PEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQ 203 (285)
T ss_pred cHHhcCCCCCccccchhHHHHHHHHHHCCCCCCC
Confidence 8888788889999999999999999999999864
No 131
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.85 E-value=4.1e-09 Score=107.83 Aligned_cols=34 Identities=29% Similarity=0.378 Sum_probs=29.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..+..++.++||||||++++||+| |+.|+..
T Consensus 198 pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 198 IESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred HHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 677667778999999999999999999 8888753
No 132
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=98.85 E-value=6.3e-09 Score=104.57 Aligned_cols=49 Identities=24% Similarity=0.385 Sum_probs=38.0
Q ss_pred CCCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
.|.-.+.||+|+||.||+|...++..+|+|.+.... ...+.|.+|++.+
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l 55 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVM 55 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHH
Confidence 355568899999999999998888889999886532 2345688887766
No 133
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=98.85 E-value=6.5e-09 Score=108.56 Aligned_cols=50 Identities=28% Similarity=0.448 Sum_probs=35.1
Q ss_pred CCCcccEecccCceeEEEEEeCC-CcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||++.... +..+|+|.+.... ......|..|+..+
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL 55 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHH
Confidence 45666889999999999999864 6789999885321 12233466666554
No 134
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=98.84 E-value=5.7e-09 Score=106.50 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=31.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++.++.++|||||||+++|++||+.|+..
T Consensus 170 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~ 203 (285)
T cd05632 170 PEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRG 203 (285)
T ss_pred hHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 8888888899999999999999999999999863
No 135
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=98.84 E-value=5.3e-09 Score=110.86 Aligned_cols=54 Identities=30% Similarity=0.334 Sum_probs=39.5
Q ss_pred hccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 522 QATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 522 ~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
...++|...+.||+|+||.||++... +|..||||++.... ......|..|++++
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il 97 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIM 97 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHH
Confidence 34556777789999999999999875 58899999985422 22334567777766
No 136
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.84 E-value=4e-09 Score=105.77 Aligned_cols=44 Identities=25% Similarity=0.340 Sum_probs=33.6
Q ss_pred EecccCceeEEEEEeC---CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 532 LIGRGGFGSVYKARIH---DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 532 ~ig~g~~g~vy~~~l~---~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
.||+|+||.||+|.+. ++..+|||+++... ....++|..|+..+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l 50 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVM 50 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHH
Confidence 4899999999999763 57889999986443 22356788888766
No 137
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.84 E-value=4.3e-09 Score=105.50 Aligned_cols=48 Identities=21% Similarity=0.266 Sum_probs=36.4
Q ss_pred CCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|.-.+.||+|+||.||+|...++..+|||.+.... .....|..|++.+
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l 53 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVM 53 (256)
T ss_pred cchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHH
Confidence 44457799999999999998777789999875432 2345677787766
No 138
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=98.84 E-value=6.4e-09 Score=110.23 Aligned_cols=60 Identities=27% Similarity=0.291 Sum_probs=43.6
Q ss_pred hhhHhhhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 516 TYLELFQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 516 ~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
...++....++|.-.+.||+|+||.||++... ++..+|+|.+.... ....+.|..|++++
T Consensus 34 ~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~ 97 (371)
T cd05622 34 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 97 (371)
T ss_pred HHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHH
Confidence 34556667788888899999999999999975 57899999885322 12234466666655
No 139
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.84 E-value=4.3e-09 Score=107.31 Aligned_cols=49 Identities=22% Similarity=0.369 Sum_probs=35.6
Q ss_pred CCcccEecccCceeEEEEEe-----CCCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARI-----HDGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l-----~~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
|...+.||+|+||.||++.+ .++..||+|.+.... ......|..|++.+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l 60 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL 60 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHH
Confidence 34457799999999999985 357889999986443 22345677777666
No 140
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.84 E-value=4.6e-09 Score=106.48 Aligned_cols=49 Identities=33% Similarity=0.523 Sum_probs=37.2
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
|.....+|.|+||.||+|... ++..||+|.+.... ......|.+|++++
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l 53 (274)
T cd06609 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFL 53 (274)
T ss_pred hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHH
Confidence 445577999999999999975 57899999986543 33445678888766
No 141
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=98.84 E-value=5.4e-09 Score=108.44 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=31.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|++.
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~ 198 (318)
T cd05570 165 PEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEG 198 (318)
T ss_pred HHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCC
Confidence 8888888899999999999999999999999863
No 142
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=98.84 E-value=1.2e-08 Score=108.41 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=29.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..++.++.++|||||||+++||+| |+.|+..
T Consensus 285 PE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~ 319 (375)
T cd05104 285 PESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPG 319 (375)
T ss_pred hhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCC
Confidence 787778889999999999999999998 7777754
No 143
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=98.83 E-value=6.6e-09 Score=106.46 Aligned_cols=33 Identities=30% Similarity=0.452 Sum_probs=29.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..+..++.++|||||||+++|+++ |..|+.
T Consensus 203 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 236 (293)
T cd05053 203 PEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 236 (293)
T ss_pred HHHhccCCcCcccceeehhhHHHHHhcCCCCCCC
Confidence 787777888999999999999999998 888865
No 144
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.83 E-value=5.5e-09 Score=110.98 Aligned_cols=50 Identities=26% Similarity=0.331 Sum_probs=36.9
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
+|...+.||+|+||.||+|... +|..||||++.... ....+.+.+|++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l 53 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKML 53 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHH
Confidence 3666788999999999999964 68999999885432 22345566776655
No 145
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.83 E-value=6.3e-09 Score=107.83 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=31.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|+..
T Consensus 165 PE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~ 198 (316)
T cd05620 165 PEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred HHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 8888888899999999999999999999999853
No 146
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=98.83 E-value=7e-09 Score=103.86 Aligned_cols=49 Identities=33% Similarity=0.384 Sum_probs=37.7
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEeccc--ccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQ--YRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~--~~~~~~~f~~e~~~~ 575 (690)
|.-.+.||+|++|.||+|+.. +|..||+|.+... ......+|..|++.+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l 53 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVL 53 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHH
Confidence 555688999999999999985 5889999988543 233456788888766
No 147
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.83 E-value=7.5e-09 Score=105.87 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=30.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||......++.++|||||||+++||+||+.|+..
T Consensus 178 PE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 211 (290)
T cd07862 178 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 211 (290)
T ss_pred hHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCC
Confidence 8888788889999999999999999999999764
No 148
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.83 E-value=5.3e-09 Score=104.95 Aligned_cols=34 Identities=29% Similarity=0.528 Sum_probs=29.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..+..++.++|||||||+++|+++ |+.|+..
T Consensus 167 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 201 (257)
T cd05115 167 PECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKK 201 (257)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCc
Confidence 676667788999999999999999997 9999864
No 149
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.83 E-value=6.3e-09 Score=108.26 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=30.9
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+..++.++|||||||+++||+||+.|+.
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 197 (323)
T cd05575 165 PEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (323)
T ss_pred hhhhcCCCCCccccccccchhhhhhhcCCCCCC
Confidence 888888889999999999999999999999975
No 150
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.83 E-value=1.6e-08 Score=101.28 Aligned_cols=33 Identities=39% Similarity=0.635 Sum_probs=30.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..+..++.++|||||||+++||+| |+.|+.
T Consensus 168 PE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~ 201 (256)
T cd05082 168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 201 (256)
T ss_pred HHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 888888889999999999999999998 888864
No 151
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.83 E-value=1.3e-08 Score=103.01 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=27.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+...+..+.++||||||++++||+| |+.|..
T Consensus 184 pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~ 217 (273)
T cd05074 184 LESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYA 217 (273)
T ss_pred HhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCC
Confidence 555556667889999999999999999 777764
No 152
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.82 E-value=6e-09 Score=109.34 Aligned_cols=44 Identities=23% Similarity=0.337 Sum_probs=34.2
Q ss_pred hhhHhhhcc----CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 516 TYLELFQAT----NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 516 ~~~~l~~at----~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
+.+|+.+++ +.|.....||+|+||.||+|+.. +|..||||++..
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~ 50 (342)
T cd07879 2 YREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSR 50 (342)
T ss_pred chhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecC
Confidence 334555443 67878889999999999999964 689999998853
No 153
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.82 E-value=1.8e-08 Score=103.38 Aligned_cols=33 Identities=33% Similarity=0.589 Sum_probs=28.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc--CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT--RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t--g~~p~~ 608 (690)
||+..++.++.++|||||||+++||+| |..|++
T Consensus 201 PE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 201 WESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred HHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 777777889999999999999999999 555654
No 154
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.82 E-value=8.6e-09 Score=107.59 Aligned_cols=50 Identities=30% Similarity=0.478 Sum_probs=35.8
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||++... ++..||||++.... ....+.|..|+.++
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVL 55 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHH
Confidence 4555678999999999999975 58899999985321 22234566666554
No 155
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.82 E-value=7.1e-09 Score=106.42 Aligned_cols=50 Identities=28% Similarity=0.351 Sum_probs=38.6
Q ss_pred CCCcccEecccCceeEEEEEe-CCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
.|...+.+|+|+||.||+|.. .++..||+|.+..........|..|+..+
T Consensus 21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l 71 (296)
T cd06654 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71 (296)
T ss_pred ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHH
Confidence 355557899999999999985 46889999998765544556677777766
No 156
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.82 E-value=8.8e-09 Score=103.89 Aligned_cols=51 Identities=24% Similarity=0.425 Sum_probs=38.6
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-----cchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-----RGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-----~~~~~~f~~e~~~~ 575 (690)
.+|...+.+|+|+||.||+|... .|..||+|++.... .+....+.+|+.++
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l 58 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLL 58 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHH
Confidence 46778899999999999999875 58899999875332 12234577787766
No 157
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.82 E-value=5.2e-09 Score=110.97 Aligned_cols=53 Identities=26% Similarity=0.375 Sum_probs=39.0
Q ss_pred ccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 523 ATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 523 at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
..++|.-..++|+|+||+|+.+.+. ++...|||.++.+. ......-+.|-+++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~ 422 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIF 422 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHH
Confidence 3456766789999999999999985 47899999997654 22344556666555
No 158
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=98.82 E-value=8.1e-09 Score=107.45 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=31.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|+..
T Consensus 170 PE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~ 203 (324)
T cd05589 170 PEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPG 203 (324)
T ss_pred HhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCC
Confidence 8888888899999999999999999999999863
No 159
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=98.82 E-value=7.3e-09 Score=103.44 Aligned_cols=44 Identities=32% Similarity=0.508 Sum_probs=35.5
Q ss_pred EecccCceeEEEEEeCCCcEEEEEEecccccc-hHHHHHHHHHHH
Q 042662 532 LIGRGGFGSVYKARIHDGMEAAVKVFDLQYRG-AFKSFDIECDMM 575 (690)
Q Consensus 532 ~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~-~~~~f~~e~~~~ 575 (690)
.||+|+||.||++...++..||+|+....... ....|..|++.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l 46 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEIL 46 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHH
Confidence 58999999999999877999999988654432 456788888766
No 160
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.81 E-value=7.5e-09 Score=109.53 Aligned_cols=51 Identities=25% Similarity=0.417 Sum_probs=37.1
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
++|...+.||+|+||+||++... +|+.||||++.... ......+..|++++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il 55 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDIL 55 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHH
Confidence 35667789999999999999864 58899999986432 12234566676655
No 161
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=98.81 E-value=4.3e-09 Score=109.88 Aligned_cols=50 Identities=32% Similarity=0.463 Sum_probs=37.4
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc---chHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR---GAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~---~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||++... +|..||||++..... ...+.|..|++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~ 55 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDIL 55 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH
Confidence 5666789999999999999875 588999999865322 2344566776665
No 162
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=98.81 E-value=1e-08 Score=104.80 Aligned_cols=33 Identities=27% Similarity=0.448 Sum_probs=28.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..++.++.|+|||||||+++||+| |..|+.
T Consensus 201 PE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 201 PESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred HHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 777777888999999999999999998 887864
No 163
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.81 E-value=6.5e-09 Score=105.95 Aligned_cols=33 Identities=30% Similarity=0.545 Sum_probs=29.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..++.++.++|||||||+++||+| |..|+.
T Consensus 195 PE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~ 228 (283)
T cd05090 195 PEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYY 228 (283)
T ss_pred hHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 777777888999999999999999999 887864
No 164
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.81 E-value=1.9e-08 Score=101.75 Aligned_cols=49 Identities=27% Similarity=0.335 Sum_probs=36.7
Q ss_pred CCcccEecccCceeEEEEEeCC----CcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHD----GMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~----~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
|.-.+.||+|+||.||+|+..+ ...||||+..... ....+.|..|+..+
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l 61 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIM 61 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHH
Confidence 4455789999999999998743 2478999886554 33456788888766
No 165
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=98.81 E-value=9.1e-09 Score=104.98 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=31.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++.++.++|||||||+++||+||+.|+..
T Consensus 170 PE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~ 203 (285)
T cd05630 170 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 203 (285)
T ss_pred hHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 8888788899999999999999999999999864
No 166
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=98.80 E-value=6.7e-09 Score=105.67 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=31.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++.++.++|||||||+++||+||+.|+..
T Consensus 166 PE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 199 (280)
T cd05608 166 PELLQGEEYDFSVDYFALGVTLYEMIAARGPFRA 199 (280)
T ss_pred HHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 8888888899999999999999999999999864
No 167
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.80 E-value=8.6e-09 Score=104.79 Aligned_cols=85 Identities=26% Similarity=0.308 Sum_probs=69.4
Q ss_pred CCcccEecccCceeEEEEEe-CCCcEEEEEEecccc-cchHHHHHHHHHHH-----------------------------
Q 042662 527 FSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQY-RGAFKSFDIECDMM----------------------------- 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~-~~~~~~f~~e~~~~----------------------------- 575 (690)
|.-..+||+|+||.||+|.. .++..||||+..... ....++|..|++.+
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 82 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD 82 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence 33447899999999999986 468899999885442 33456788888876
Q ss_pred -------------------------------------------------------------------------------H
Q 042662 576 -------------------------------------------------------------------------------K 576 (690)
Q Consensus 576 -------------------------------------------------------------------------------p 576 (690)
|
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aP 162 (279)
T cd06619 83 GGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAP 162 (279)
T ss_pred CCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCc
Confidence 8
Q ss_pred hcccCCcccccceEEehhHHHHHHhcCCCCCCccC
Q 042662 577 QYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEVF 611 (690)
Q Consensus 577 e~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~~ 611 (690)
|+..+...+.++|||||||+++|++||+.|++...
T Consensus 163 E~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~ 197 (279)
T cd06619 163 ERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQ 197 (279)
T ss_pred eeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhc
Confidence 88888889999999999999999999999986533
No 168
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.80 E-value=1.5e-09 Score=102.82 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=31.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||..+...++.|+||||.|+|+.||..=+.|+.
T Consensus 197 PE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~ 229 (375)
T KOG0591|consen 197 PERIHESGYNFKSDIWSLGCLLYEMCALQSPFY 229 (375)
T ss_pred HHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999999999999999999975
No 169
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.80 E-value=1.1e-08 Score=107.06 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=30.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..+..++.|+|||||||+++|++| |+.|+..
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~ 278 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 278 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCC
Confidence 777777888999999999999999998 9988753
No 170
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.80 E-value=6.9e-09 Score=108.06 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=31.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..++.++.++|||||||+++||+||+.|+.
T Consensus 165 PE~~~~~~~~~~~DvwslG~il~el~~G~~pf~ 197 (325)
T cd05604 165 PEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFY 197 (325)
T ss_pred HHHHcCCCCCCcCccccccceehhhhcCCCCCC
Confidence 888888889999999999999999999999975
No 171
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.80 E-value=1.5e-08 Score=104.01 Aligned_cols=33 Identities=30% Similarity=0.524 Sum_probs=27.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc--CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT--RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t--g~~p~~ 608 (690)
||+..++.++.++|||||||+++||+| |..|..
T Consensus 201 pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 201 WESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred HHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 565666778899999999999999999 555654
No 172
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=98.80 E-value=6.3e-09 Score=107.09 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=29.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+...+.++.++|||||||+++|++| |+.|+..
T Consensus 212 PE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~ 246 (302)
T cd05055 212 PESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPG 246 (302)
T ss_pred HhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCC
Confidence 777777788999999999999999999 8888753
No 173
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=98.80 E-value=1.4e-08 Score=104.23 Aligned_cols=33 Identities=33% Similarity=0.525 Sum_probs=27.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcC--CCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTR--KKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg--~~p~~ 608 (690)
||+...+.++.++|||||||+++||+|+ ..|++
T Consensus 200 PE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~ 234 (295)
T cd05097 200 WESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS 234 (295)
T ss_pred hhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence 6777778889999999999999999995 44544
No 174
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.79 E-value=1.2e-08 Score=108.85 Aligned_cols=50 Identities=24% Similarity=0.263 Sum_probs=37.3
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
.|.....||+|+||+||+|... ++..||||++.... ......|..|++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il 55 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDIL 55 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHH
Confidence 3555678999999999999874 57899999986432 22345677887766
No 175
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.79 E-value=4e-09 Score=79.42 Aligned_cols=61 Identities=44% Similarity=0.572 Sum_probs=47.2
Q ss_pred CCCCEEEccCCcCCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcC
Q 042662 10 AELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKL 70 (690)
Q Consensus 10 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l 70 (690)
++|++|++++|+++...+.+|.++++|++|++++|.++...|..|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4677888888888866666777888888888888888777777778888888888887764
No 176
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=98.79 E-value=8.8e-09 Score=105.12 Aligned_cols=53 Identities=28% Similarity=0.330 Sum_probs=42.7
Q ss_pred hccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 522 QATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 522 ~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+.+++|...+.+|+|++|.||+|... ++..||+|++..... ....|..|++.+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l 69 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIM 69 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHH
Confidence 56677887889999999999999987 588999999876544 456677887766
No 177
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=98.79 E-value=1.9e-08 Score=106.78 Aligned_cols=34 Identities=29% Similarity=0.448 Sum_probs=30.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+...+.++.++|||||||+++||+| |+.|+..
T Consensus 283 PE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~ 317 (374)
T cd05106 283 PESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPG 317 (374)
T ss_pred HHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 777777888999999999999999998 9999764
No 178
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.79 E-value=9.4e-09 Score=108.85 Aligned_cols=31 Identities=29% Similarity=0.308 Sum_probs=29.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPT 607 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~ 607 (690)
||...+..++++.||||||||+.||+|| .|.
T Consensus 357 PEVILGlpY~~~IDmWSLGCIlAEL~tG-~PL 387 (586)
T KOG0667|consen 357 PEVILGLPYDTAIDMWSLGCILAELFTG-EPL 387 (586)
T ss_pred chhhccCCCCCccceeehhhhHHhHhcC-ccc
Confidence 9999999999999999999999999999 454
No 179
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=98.79 E-value=5.6e-09 Score=106.02 Aligned_cols=53 Identities=23% Similarity=0.306 Sum_probs=36.8
Q ss_pred ccCCCCcccEecccCceeEEEEEeC------CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 523 ATNGFSENNLIGRGGFGSVYKARIH------DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 523 at~~f~~~~~ig~g~~g~vy~~~l~------~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
++++|.-.+.||+|+||.||+|... .+..||||++.... .....+|..|+..+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l 63 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 63 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHH
Confidence 4566777899999999999999753 24679999875422 22334566666554
No 180
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.79 E-value=1.1e-08 Score=107.00 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=29.1
Q ss_pred HhcccCC-cccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~-~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+. ..+.++|||||||+++||+||+.|++.
T Consensus 175 PE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 175 PEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred HHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 7876654 368899999999999999999999863
No 181
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.79 E-value=7.7e-09 Score=108.00 Aligned_cols=51 Identities=22% Similarity=0.347 Sum_probs=39.2
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
++|...+.||+|+||.||+|... +|..+|+|.+..... .....|.+|++.+
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l 57 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL 57 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHH
Confidence 45666788999999999999986 578899998765432 2345688888876
No 182
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.79 E-value=1.1e-08 Score=103.24 Aligned_cols=51 Identities=25% Similarity=0.460 Sum_probs=37.7
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-----cchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-----RGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-----~~~~~~f~~e~~~~ 575 (690)
++|...+.||+|+||.||+|... +|..||||++.... ....+.|.+|++.+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l 58 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLL 58 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHH
Confidence 35677789999999999999875 48899999875322 12234677777766
No 183
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.79 E-value=1e-08 Score=103.51 Aligned_cols=50 Identities=36% Similarity=0.523 Sum_probs=37.6
Q ss_pred CCCcccEecccCceeEEEEEe-CCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+|.-...||+|+||.||+|+. .+|..||+|++..........+..|+..+
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l 60 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMV 60 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHH
Confidence 455567899999999999996 46889999998655444445566777655
No 184
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.79 E-value=8.2e-09 Score=106.36 Aligned_cols=52 Identities=25% Similarity=0.448 Sum_probs=38.6
Q ss_pred cCCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 524 TNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 524 t~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
.++|.-.+.||+|+||.||+|... +|..||||++..... .....+.+|++.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l 57 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLL 57 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHH
Confidence 355666788999999999999975 688999999864432 2234566777665
No 185
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=98.79 E-value=1.2e-08 Score=102.95 Aligned_cols=49 Identities=24% Similarity=0.575 Sum_probs=36.7
Q ss_pred CCcccEecccCceeEEEEEeCCCcEEEEEEeccccc------chHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYR------GAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~------~~~~~f~~e~~~~ 575 (690)
|.-...||+|+||.||+|...+|..+|||.+..... .....|.+|++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l 56 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLL 56 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHH
Confidence 344578999999999999988899999998864321 1234577777766
No 186
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.79 E-value=1.8e-08 Score=100.95 Aligned_cols=34 Identities=32% Similarity=0.463 Sum_probs=30.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+| |+.|++.
T Consensus 169 pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 203 (257)
T cd05040 169 PESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG 203 (257)
T ss_pred HHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 777777888999999999999999999 9999753
No 187
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.78 E-value=1.2e-08 Score=104.52 Aligned_cols=46 Identities=35% Similarity=0.485 Sum_probs=39.7
Q ss_pred cchhhHhhhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 514 RFTYLELFQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 514 ~~~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
.++++++.+++++|.-...+|+|+||.||++... ++..+|+|++..
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~ 57 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDP 57 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecc
Confidence 4667888889999999999999999999999974 588999998743
No 188
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.78 E-value=8.4e-09 Score=105.86 Aligned_cols=50 Identities=28% Similarity=0.336 Sum_probs=39.0
Q ss_pred CCCcccEecccCceeEEEEEe-CCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+|.....||.|+||.||+|+. .+|..||||.+........+.+..|++.+
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l 70 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVM 70 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHH
Confidence 355667899999999999985 46899999998765544556777887766
No 189
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.78 E-value=1.1e-08 Score=103.41 Aligned_cols=33 Identities=27% Similarity=0.370 Sum_probs=29.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+.....++.++|||||||+++||+| |+.|+.
T Consensus 180 pE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~ 213 (270)
T cd05047 180 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 213 (270)
T ss_pred hHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 777777788999999999999999997 999875
No 190
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.78 E-value=7.5e-09 Score=106.26 Aligned_cols=45 Identities=33% Similarity=0.349 Sum_probs=35.3
Q ss_pred cEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
..||+|+||.||+|... ++..||||++........+.+.+|+..+
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l 72 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIM 72 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHH
Confidence 46999999999999874 6899999998655444456677787665
No 191
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.78 E-value=1.5e-08 Score=104.33 Aligned_cols=33 Identities=27% Similarity=0.370 Sum_probs=28.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..+..++.++|||||||+++|++| |+.|..
T Consensus 192 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 225 (303)
T cd05088 192 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 225 (303)
T ss_pred HHHHhccCCcccccchhhhhHHHHHHhcCCCCcc
Confidence 666666778899999999999999998 998875
No 192
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.78 E-value=1e-08 Score=104.18 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=31.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++.++.++|||||||+++||+||+.|+..
T Consensus 163 PE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~ 196 (277)
T cd05607 163 PEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKD 196 (277)
T ss_pred HHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 8888888899999999999999999999999753
No 193
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=98.78 E-value=1.1e-08 Score=97.92 Aligned_cols=45 Identities=31% Similarity=0.341 Sum_probs=33.8
Q ss_pred cEecccCceeEEEEEeCC-CcEEEEEEeccccc-ch-HHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYR-GA-FKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~-~~-~~~f~~e~~~~ 575 (690)
-++|+|+||+|||++-.+ |+.||||++..... .. .+--++|++++
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmL 55 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRML 55 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHH
Confidence 468999999999999864 99999999965432 22 23346777777
No 194
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.78 E-value=1.2e-08 Score=106.09 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=30.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||...+..++.++|||||||+++||+||+.|+.
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 197 (321)
T cd05603 165 PEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (321)
T ss_pred HHHhcCCCCCCcCcccccchhhhhhhcCCCCCC
Confidence 888878888999999999999999999999975
No 195
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.77 E-value=1.3e-08 Score=104.40 Aligned_cols=50 Identities=30% Similarity=0.341 Sum_probs=37.8
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
.|...+.+|+|+||.||+|... ++..||+|.+........+.|..|+..+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l 70 (293)
T cd06647 20 KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVM 70 (293)
T ss_pred hceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHH
Confidence 4555578999999999999854 6789999998655444456677777655
No 196
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=98.77 E-value=1.6e-08 Score=101.95 Aligned_cols=50 Identities=24% Similarity=0.343 Sum_probs=37.9
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
+|.-.+.+|.|+||.||+|... ++..+|||++.... ....+.+.+|++.+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l 53 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAM 53 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHH
Confidence 5666788999999999999964 57899999986433 22456677777765
No 197
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=98.77 E-value=1.4e-08 Score=107.54 Aligned_cols=57 Identities=28% Similarity=0.322 Sum_probs=40.6
Q ss_pred HhhhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 519 ELFQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 519 ~l~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
++....++|.-.+.||+|+||.||++... ++..+|+|.+.... ....+.|..|++++
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~ 97 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 97 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHH
Confidence 33445566777789999999999999975 47899999985422 22234566777665
No 198
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.77 E-value=7.4e-09 Score=109.15 Aligned_cols=46 Identities=28% Similarity=0.279 Sum_probs=35.6
Q ss_pred ccEecccCceeEEEEEeC-CCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
.+.||+|+||.||+|+.. +|+.||||++..... .....|.+|++++
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 126 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEIL 126 (353)
T ss_pred hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHH
Confidence 367999999999999875 589999999854432 2345688888776
No 199
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.77 E-value=4.5e-08 Score=99.95 Aligned_cols=50 Identities=28% Similarity=0.285 Sum_probs=37.8
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
+|...+.||.|++|.||+|... ++..+|+|.+..... ....+|.+|++.+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l 53 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEIN 53 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHH
Confidence 5667789999999999999985 578899998864322 2345677777665
No 200
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.77 E-value=1.2e-08 Score=104.67 Aligned_cols=50 Identities=30% Similarity=0.349 Sum_probs=38.9
Q ss_pred CCCcccEecccCceeEEEEEe-CCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
.|...+.||+|+||.||+|.. .+|..||+|.+........+.+..|+..+
T Consensus 20 ~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l 70 (297)
T cd06656 20 KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVM 70 (297)
T ss_pred hceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHH
Confidence 455668899999999999986 46899999998765544456677777765
No 201
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.77 E-value=1.2e-08 Score=102.50 Aligned_cols=48 Identities=21% Similarity=0.326 Sum_probs=36.4
Q ss_pred CCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|.-...||+|++|.||+|...++..||+|++..... ..+.|.+|++.+
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l 55 (260)
T cd05069 8 LRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIM 55 (260)
T ss_pred eeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHH
Confidence 334467999999999999988777899998765432 345677787766
No 202
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.77 E-value=1.1e-08 Score=104.65 Aligned_cols=50 Identities=22% Similarity=0.327 Sum_probs=37.0
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
+|...+.||+|+||.||+|... ++..||+|++.... ......+.+|++++
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 57 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLL 57 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHH
Confidence 4556688999999999999875 57899999886433 22334566777766
No 203
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.77 E-value=5.7e-09 Score=105.97 Aligned_cols=34 Identities=18% Similarity=0.360 Sum_probs=31.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++|++||+.|...
T Consensus 170 PE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06642 170 PEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred HHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcc
Confidence 8888888889999999999999999999999753
No 204
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.76 E-value=1.2e-08 Score=108.10 Aligned_cols=33 Identities=15% Similarity=0.043 Sum_probs=31.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+..++.++|||||||+++||+||+.|+.
T Consensus 194 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 226 (364)
T cd07875 194 PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226 (364)
T ss_pred HHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCC
Confidence 888888889999999999999999999999975
No 205
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.76 E-value=9.7e-09 Score=107.59 Aligned_cols=48 Identities=21% Similarity=0.316 Sum_probs=35.4
Q ss_pred CcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 528 SENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 528 ~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
.-.+.||+|+||.||+|+.. +|..||||++.... ......+.+|++.+
T Consensus 3 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l 53 (338)
T cd07859 3 KIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLL 53 (338)
T ss_pred EEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHH
Confidence 34578999999999999864 68999999986432 22344577777665
No 206
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.76 E-value=1.5e-08 Score=104.67 Aligned_cols=51 Identities=25% Similarity=0.367 Sum_probs=37.9
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc---chHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR---GAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~---~~~~~f~~e~~~~ 575 (690)
..|...+.+|+|+||.||+|+.. +|..||+|++..... ...+++.+|++.+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l 69 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHH
Confidence 34666688999999999999975 588999998854322 2335677887766
No 207
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=98.76 E-value=8.6e-09 Score=104.88 Aligned_cols=33 Identities=33% Similarity=0.504 Sum_probs=29.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..+..++.++|||||||+++||+| |+.|+.
T Consensus 193 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 226 (280)
T cd05092 193 PESILYRKFTTESDIWSFGVVLWEIFTYGKQPWY 226 (280)
T ss_pred HHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCc
Confidence 777777888999999999999999999 888864
No 208
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=98.76 E-value=1e-08 Score=104.54 Aligned_cols=50 Identities=26% Similarity=0.325 Sum_probs=37.1
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
+|...+.||+|+||.||+|... ++..||+|++.... ....+.|..|++.+
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l 54 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRML 54 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHH
Confidence 4555688999999999999986 48899999875432 22345677777766
No 209
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.76 E-value=6.8e-10 Score=119.07 Aligned_cols=242 Identities=25% Similarity=0.263 Sum_probs=116.6
Q ss_pred CCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCCCEEecCCCCCCCCCEEeccCCccCccC
Q 042662 32 NLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTLKSLYLHNVRLPNLEELLLWGNNFSGTI 111 (690)
Q Consensus 32 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~~~l~~L~~L~L~~n~l~~~~ 111 (690)
.+..++.+++..|.+.. +-..++.+++|.+|++..|++..... .+..+++|+ +|++++|.++...
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~-------------~L~ls~N~I~~i~ 134 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQ-------------VLDLSFNKITKLE 134 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhccc-chhhhhcch-------------heecccccccccc
Confidence 34444445555555442 22334555555566666655553211 133333333 3333333332211
Q ss_pred CccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCcccC--CCCCCCCCEEEccCCcCCCCCC
Q 042662 112 PSFIFNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSS--LSNCKYLEYFGFYNNPLGGILP 189 (690)
Q Consensus 112 p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~--l~~l~~L~~L~l~~n~l~~~~p 189 (690)
+ +..+..|+.|++++|.++.. ..+..++.|+.+++++|.+.... . +..+.+++.+.+.+|.+.....
T Consensus 135 ~--l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie-------~~~~~~~~~l~~l~l~~n~i~~i~~ 203 (414)
T KOG0531|consen 135 G--LSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIE-------NDELSELISLEELDLGGNSIREIEG 203 (414)
T ss_pred c--hhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhh-------hhhhhhccchHHHhccCCchhcccc
Confidence 1 23334455555555555432 23444555555555555554432 1 3445555555555555443222
Q ss_pred hhhhhccccCcEEEeecCcccccCcccccCCC--CCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccCCccccC
Q 042662 190 RAIGNLSQSMEDFQMHNCNISGSIPEEISNLT--NLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPDNLCG 267 (690)
Q Consensus 190 ~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~--~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 267 (690)
..... .+..+++..|.++..-+ +..+. .|+.+++++|.+. ..+..+..+..+..|++.+|++...- .+..
T Consensus 204 ~~~~~---~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~ 275 (414)
T KOG0531|consen 204 LDLLK---KLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLE--GLER 275 (414)
T ss_pred hHHHH---HHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhccccccc--cccc
Confidence 11111 33334555565542211 11222 2677777777776 23345666677777777777766431 2334
Q ss_pred CCCCCEEEeeCCcCccc---Ccc-cccCCCCCCeeeCCCCccCc
Q 042662 268 LAALFQLDLGGNKLCGF---IPA-CSGNLTNLRKLYLGSNQLTS 307 (690)
Q Consensus 268 l~~L~~L~L~~n~l~~~---~~~-~~~~l~~L~~L~L~~n~l~~ 307 (690)
.+.+..+....|.+... ... .....+.++.+.+..|....
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 276 LPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred cchHHHhccCcchhcchhhhhccccccccccccccccccCcccc
Confidence 44555556666655421 111 14556777778777776665
No 210
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=98.76 E-value=2.7e-08 Score=100.44 Aligned_cols=50 Identities=26% Similarity=0.472 Sum_probs=36.3
Q ss_pred CCCcccEecccCceeEEEEEeC----CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH----DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~----~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||+|... .+..+|+|.++... ....+.|..|+..+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l 59 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIM 59 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 3445688999999999999863 23479999886543 22345788888766
No 211
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=98.75 E-value=1.6e-08 Score=101.26 Aligned_cols=49 Identities=35% Similarity=0.517 Sum_probs=37.6
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-----cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-----RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-----~~~~~~f~~e~~~~ 575 (690)
|...+.||+|+||.||+|+.. ++..||+|.+.... ....+.|..|++.+
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l 56 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALL 56 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHH
Confidence 445578999999999999986 68999999885433 12345688888766
No 212
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.75 E-value=2.5e-08 Score=101.66 Aligned_cols=33 Identities=27% Similarity=0.507 Sum_probs=29.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..++.++.++|||||||+++||+| |..|..
T Consensus 195 PE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 228 (283)
T cd05091 195 PEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 228 (283)
T ss_pred HHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence 787778889999999999999999999 777765
No 213
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=98.75 E-value=2.1e-08 Score=100.99 Aligned_cols=50 Identities=26% Similarity=0.254 Sum_probs=37.4
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||++... ++..||+|++.... ....++|.+|++.+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l 53 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDIL 53 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHH
Confidence 3445577999999999999986 58899999886543 23445677777655
No 214
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=98.75 E-value=1e-08 Score=104.06 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=31.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++.++.++|||||||+++||+||+.|...
T Consensus 170 pE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06640 170 PEVIQQSAYDSKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred HhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCC
Confidence 8888888899999999999999999999999764
No 215
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.75 E-value=1.1e-08 Score=105.76 Aligned_cols=50 Identities=22% Similarity=0.314 Sum_probs=36.9
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
.|...+.||+|+||.||+|+.. ++..||||++.... ......+.+|++.+
T Consensus 7 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 58 (309)
T cd07872 7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLL 58 (309)
T ss_pred ceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHH
Confidence 4556678999999999999875 57889999986443 22334566777766
No 216
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.75 E-value=1.8e-08 Score=102.88 Aligned_cols=49 Identities=29% Similarity=0.261 Sum_probs=36.6
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|..-+.||+|++|.||+|... ++..||+|++........+.+.+|+..+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l 70 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIM 70 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHH
Confidence 334478999999999999864 6889999988655444455677777655
No 217
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.74 E-value=1.6e-08 Score=106.88 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=30.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||...+..++.++|||||||+++||+||+.|+.
T Consensus 191 PE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~ 223 (359)
T cd07876 191 PEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ 223 (359)
T ss_pred chhccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 888888889999999999999999999999975
No 218
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.74 E-value=6.6e-09 Score=102.67 Aligned_cols=35 Identities=34% Similarity=0.521 Sum_probs=31.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCcc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDEV 610 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~~ 610 (690)
||-.....++..+|||||||+||||+| |+.|+-+.
T Consensus 467 lEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI 502 (563)
T KOG1024|consen 467 LEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI 502 (563)
T ss_pred HHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc
Confidence 788888899999999999999999999 99998643
No 219
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.74 E-value=1.3e-08 Score=104.23 Aligned_cols=53 Identities=23% Similarity=0.390 Sum_probs=39.5
Q ss_pred ccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 523 ATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 523 at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
|+++|...+.||+|+||.||+|... +|..||||++..... +....+.+|++.+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l 57 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLL 57 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHH
Confidence 5677888889999999999999864 588999999864432 2233566676555
No 220
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.74 E-value=9.4e-09 Score=104.27 Aligned_cols=41 Identities=46% Similarity=0.705 Sum_probs=32.0
Q ss_pred cEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
.++|+|.||.||||.+ +++.||||++... ..+.|.+|=++.
T Consensus 216 eli~~Grfg~V~KaqL-~~~~VAVKifp~~---~kqs~~~Ek~Iy 256 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ---EKQSFQNEKNIY 256 (534)
T ss_pred HHhhcCccceeehhhc-cCceeEEEecCHH---HHHHHHhHHHHH
Confidence 6799999999999999 5599999998553 345566665544
No 221
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=98.74 E-value=1e-08 Score=102.84 Aligned_cols=45 Identities=22% Similarity=0.274 Sum_probs=35.7
Q ss_pred ccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
...||+|+||.||+|...++..||||.+.... ....+|.+|+..+
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l 53 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVM 53 (256)
T ss_pred eeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHH
Confidence 36799999999999998777789999886543 2346788888776
No 222
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=98.74 E-value=1.9e-08 Score=105.02 Aligned_cols=46 Identities=35% Similarity=0.525 Sum_probs=36.5
Q ss_pred ccEecccCceeEEEEEeCC-----CcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIHD-----GMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~~-----~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
.++||.|-||.||+|++.+ ...||||..+.+. ....+.|..|..+|
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iM 445 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIM 445 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHH
Confidence 4789999999999999843 2569999987754 34466799999877
No 223
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.74 E-value=1.6e-08 Score=106.06 Aligned_cols=50 Identities=26% Similarity=0.416 Sum_probs=39.7
Q ss_pred CCCcccEecccCceeEEEEEe-CCCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
.|...++||+|||+.||+++- ..|..||+|++.... ........+||++-
T Consensus 19 ~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIH 72 (592)
T KOG0575|consen 19 RYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIH 72 (592)
T ss_pred eeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHH
Confidence 366678999999999999997 789999999986532 33455677888766
No 224
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.74 E-value=2.4e-08 Score=102.87 Aligned_cols=33 Identities=27% Similarity=0.439 Sum_probs=28.9
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..+..++.++|||||||+++|++| |..|+.
T Consensus 208 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 241 (304)
T cd05101 208 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 241 (304)
T ss_pred chhhccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 777777888999999999999999999 677764
No 225
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.74 E-value=2e-08 Score=104.59 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=31.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+..++.++|||||||+++||+||+.|+.
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 197 (325)
T cd05602 165 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (325)
T ss_pred HHHHcCCCCCCccccccccHHHHHHhcCCCCCC
Confidence 888888889999999999999999999999986
No 226
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.73 E-value=1.3e-08 Score=107.66 Aligned_cols=50 Identities=26% Similarity=0.419 Sum_probs=36.8
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|...+.||+|+||.||++... +|..||||++.... ......+..|++++
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDIL 55 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHH
Confidence 5666789999999999999875 58899999985432 22234566676655
No 227
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=98.73 E-value=2.2e-08 Score=106.61 Aligned_cols=50 Identities=24% Similarity=0.376 Sum_probs=36.8
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||++... +|..||||++.... ....+.+.+|++++
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il 55 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVL 55 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHH
Confidence 5666688999999999999864 68899999885432 22344567777765
No 228
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=98.73 E-value=1.1e-08 Score=106.56 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=31.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..++.++.++|||||||+++||+||+.|+.
T Consensus 165 PE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~ 197 (325)
T cd05594 165 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 197 (325)
T ss_pred HHHHccCCCCCccccccccceeeeeccCCCCCC
Confidence 888888889999999999999999999999985
No 229
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.73 E-value=1.8e-09 Score=115.72 Aligned_cols=193 Identities=28% Similarity=0.350 Sum_probs=86.5
Q ss_pred CCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChhhhhccccC
Q 042662 120 KLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIGNLSQSM 199 (690)
Q Consensus 120 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~L 199 (690)
.++.+++..|.+.. +-..+..+++|+.|++.+|.+.... ..+..+++|++|++++|.++...+ +..+. .|
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~------~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~-~L 142 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIE------NLLSSLVNLQVLDLSFNKITKLEG--LSTLT-LL 142 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchhhcc------cchhhhhcchheeccccccccccc--hhhcc-ch
Confidence 33444444444432 1222444455555555555544431 113444444444444444443321 11222 35
Q ss_pred cEEEeecCcccccCcccccCCCCCCEEECCCCcCcccch-hhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeC
Q 042662 200 EDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIP-IALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGG 278 (690)
Q Consensus 200 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 278 (690)
+.|++++|.++.. ..+..++.|+.+++++|.+...-+ . ...+.+++.+++.+|.+... ..+..+..+..+++..
T Consensus 143 ~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~ 217 (414)
T KOG0531|consen 143 KELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLD 217 (414)
T ss_pred hhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhccc
Confidence 5555555555421 123345666666666666653333 1 34556666666666655422 1222233333445555
Q ss_pred CcCcccCcccccCCC--CCCeeeCCCCccCcccccccccCCCceeeccCCccc
Q 042662 279 NKLCGFIPACSGNLT--NLRKLYLGSNQLTSIPSTLWNLKDILHLNLSSNSFT 329 (690)
Q Consensus 279 n~l~~~~~~~~~~l~--~L~~L~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~ 329 (690)
|.++..-+. ..+. .|+.++++.|.+..++..+..+..+..|++.+|++.
T Consensus 218 n~i~~~~~l--~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 218 NKISKLEGL--NELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred ccceeccCc--ccchhHHHHHHhcccCccccccccccccccccccchhhcccc
Confidence 555433221 1112 255555555555554434444444444555444443
No 230
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.73 E-value=1.8e-08 Score=102.49 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=30.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+...+.++.++|||||||+++|++| |+.|++.
T Consensus 180 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 214 (279)
T cd05057 180 LESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEG 214 (279)
T ss_pred HHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCC
Confidence 677767888999999999999999999 9999864
No 231
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.73 E-value=2.4e-08 Score=100.63 Aligned_cols=51 Identities=27% Similarity=0.463 Sum_probs=38.2
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccc-----ccchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQ-----YRGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~-----~~~~~~~f~~e~~~~ 575 (690)
.+|.-.+.||+|+||.||+|... +|..||+|.+... ..+....|.+|++.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l 58 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLL 58 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHH
Confidence 35667789999999999999874 5889999987432 122345688888766
No 232
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.73 E-value=1.8e-08 Score=105.81 Aligned_cols=61 Identities=20% Similarity=0.251 Sum_probs=45.3
Q ss_pred chhhHhhhccCCCCcccEecccCceeEEEEEe-CCCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 515 FTYLELFQATNGFSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 515 ~~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
....++..++++|.....||+|+||.||+|.. .+|..||||++.... ....+.+.+|++.+
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l 70 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 70 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHH
Confidence 44567778889999889999999999999985 468899999986432 12234466666544
No 233
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=98.72 E-value=1.6e-08 Score=115.06 Aligned_cols=50 Identities=28% Similarity=0.298 Sum_probs=36.5
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc---chHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR---GAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~---~~~~~f~~e~~~~ 575 (690)
.|...+.||+|+||.||+|+.. .|+.||||++..... ...++|.+|++++
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~IL 56 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIA 56 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHH
Confidence 4566688999999999999875 488999999864321 2234566776655
No 234
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.72 E-value=1.3e-08 Score=101.94 Aligned_cols=46 Identities=28% Similarity=0.470 Sum_probs=35.2
Q ss_pred CCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|.-.+.||+|+||.||+|.. .+..||+|+..... ....|..|+..+
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l 53 (254)
T cd05083 8 LTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVM 53 (254)
T ss_pred ceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHH
Confidence 44457899999999999986 67889999885432 245677887766
No 235
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.72 E-value=1.3e-08 Score=104.17 Aligned_cols=45 Identities=31% Similarity=0.287 Sum_probs=35.0
Q ss_pred cEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
..||+|+||.||++... ++..||||++........+.|..|+..+
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l 73 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIM 73 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHH
Confidence 55999999999999874 5889999998655444455677777655
No 236
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.72 E-value=3.2e-09 Score=99.69 Aligned_cols=56 Identities=30% Similarity=0.289 Sum_probs=40.7
Q ss_pred ccchhhHhhhccCCCCcccEecccCceeEEEEEe-CCCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 513 KRFTYLELFQATNGFSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 513 ~~~~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
..|+-++++.. ..||.|+||+|+|-.. +.|+.+|||++..... ...++|..|.+..
T Consensus 59 ~~F~~~~Lqdl-------g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~ 116 (361)
T KOG1006|consen 59 HTFTSDNLQDL-------GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTV 116 (361)
T ss_pred cccccchHHHH-------HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHH
Confidence 34555555543 5699999999999876 4699999999976543 4556777777654
No 237
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.72 E-value=2.5e-08 Score=99.33 Aligned_cols=49 Identities=39% Similarity=0.609 Sum_probs=39.3
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|...+.||+|++|.||++... ++..+++|++........+.+.+|++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l 51 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQIL 51 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHH
Confidence 455678999999999999986 6889999998766544566788888765
No 238
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.72 E-value=1.7e-08 Score=106.46 Aligned_cols=33 Identities=18% Similarity=0.086 Sum_probs=30.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+..++.++|||||||+++||+||+.|+.
T Consensus 187 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 219 (355)
T cd07874 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219 (355)
T ss_pred HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 888888889999999999999999999999975
No 239
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.72 E-value=2.7e-08 Score=106.07 Aligned_cols=49 Identities=27% Similarity=0.341 Sum_probs=36.6
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
|...+.||+|+||.||+|... ++..||||++.... ......+.+|++++
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il 55 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDIL 55 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHH
Confidence 556688999999999999864 57899999986432 22344577777765
No 240
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=98.72 E-value=1.2e-08 Score=105.88 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=30.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+...+.++|||||||+++||+||+.|+..
T Consensus 167 PE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 200 (318)
T cd05582 167 PEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQG 200 (318)
T ss_pred HHHHcCCCCCCccceeccceEeeeeccCCCCCCC
Confidence 8887777889999999999999999999999863
No 241
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=98.72 E-value=2.5e-08 Score=100.26 Aligned_cols=50 Identities=24% Similarity=0.295 Sum_probs=39.7
Q ss_pred CCCcccEecccCceeEEEEEeCC-CcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|++|.||+|+..+ |..||||++..... ...+.|.+|++.+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l 53 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTL 53 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHH
Confidence 46666889999999999999874 89999999866543 3456788888766
No 242
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.72 E-value=3.8e-08 Score=98.55 Aligned_cols=49 Identities=24% Similarity=0.388 Sum_probs=36.4
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
|...+.+|+|+||.||+|... +|..||+|.+.... ....+.+.+|++.+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l 53 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILL 53 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHH
Confidence 556688999999999999986 47889999985532 22345677777655
No 243
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.71 E-value=2.3e-08 Score=104.94 Aligned_cols=54 Identities=19% Similarity=0.210 Sum_probs=38.0
Q ss_pred hccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 522 QATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 522 ~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
...+.|.....||+|+||.||+|... ++..||||++.... ....+.+.+|++.+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l 68 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLL 68 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHH
Confidence 34456777788999999999999864 57899999986432 12234455666555
No 244
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=98.71 E-value=2.2e-08 Score=103.42 Aligned_cols=50 Identities=22% Similarity=0.272 Sum_probs=37.6
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
+|...+.||+|+||.||++... +|..+|+|.+..... ....++.+|++.+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l 53 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVL 53 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHH
Confidence 5667788999999999999875 578899998865422 2234577888766
No 245
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.71 E-value=3e-08 Score=99.73 Aligned_cols=49 Identities=33% Similarity=0.434 Sum_probs=38.1
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccccc--hHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRG--AFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~--~~~~f~~e~~~~ 575 (690)
|...+.||+|+||.||+|... ++..||||.+...... ..+.|..|++.+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~ 53 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVL 53 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHH
Confidence 344578999999999999875 6889999998655432 466788888766
No 246
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.71 E-value=2.8e-08 Score=101.46 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=30.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..++.++.++|||||||+++||+||+.|..
T Consensus 176 PE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 176 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred chHhhCCCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence 888888889999999999999999999998875
No 247
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.71 E-value=1.6e-08 Score=109.61 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=29.4
Q ss_pred HhcccC-CcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~-~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+ ..++.++|||||||+++||+||+.|+..
T Consensus 239 PE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 273 (440)
T PTZ00036 239 PELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSG 273 (440)
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 887655 4689999999999999999999998753
No 248
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=98.70 E-value=3.3e-08 Score=98.98 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=30.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..++..+.|+|||||||+++|++||+.|+.
T Consensus 170 pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~ 202 (256)
T cd08218 170 PEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202 (256)
T ss_pred HHHhCCCCCCCccchhHHHHHHHHHHcCCCCcc
Confidence 888888889999999999999999999999976
No 249
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.70 E-value=3.3e-08 Score=99.20 Aligned_cols=49 Identities=24% Similarity=0.368 Sum_probs=37.5
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
|.-.+.||.|+||.||+|... ++..||+|.+.... ....+.+.+|++.+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l 54 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRIL 54 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHH
Confidence 445578999999999999986 48899999986432 23456788887765
No 250
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.70 E-value=2.3e-08 Score=102.44 Aligned_cols=49 Identities=29% Similarity=0.554 Sum_probs=38.1
Q ss_pred CCcccEecccCceeEEEEEeCC-CcEEEEEEecccccchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
|.-.+.||+|+||.||+|.... +..||+|.+........+.|..|++.+
T Consensus 14 y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l 63 (292)
T cd06644 14 WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEIL 63 (292)
T ss_pred hhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHH
Confidence 3344679999999999999854 789999998765555566788887766
No 251
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.70 E-value=2.6e-08 Score=100.81 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=28.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+.....++.++|||||||+++|++| |+.|+.
T Consensus 183 pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 216 (272)
T cd05075 183 IESLADRVYTTKSDVWSFGVTMWEIATRGQTPYP 216 (272)
T ss_pred HHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence 666666778899999999999999999 777764
No 252
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=98.70 E-value=3.2e-08 Score=99.56 Aligned_cols=51 Identities=25% Similarity=0.462 Sum_probs=38.5
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc-----chHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR-----GAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~-----~~~~~f~~e~~~~ 575 (690)
++|...+.||+|++|.||+|... ++..||+|.+..... ...+.+.+|++.+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l 58 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLL 58 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHH
Confidence 56888899999999999999864 589999998754321 1234677787766
No 253
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.70 E-value=2e-08 Score=102.28 Aligned_cols=50 Identities=32% Similarity=0.462 Sum_probs=37.2
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
+|...+.||.|++|.||+|+.. +|..||||++.... ......|..|++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l 53 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 53 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHH
Confidence 4666788999999999999875 58899999886433 22234577777666
No 254
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.70 E-value=1.4e-08 Score=103.94 Aligned_cols=45 Identities=31% Similarity=0.409 Sum_probs=35.7
Q ss_pred cEecccCceeEEEEEe-CCCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARI-HDGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
..||+|.||.||||.- .+|..||.|++..+. .+...--.+||.++
T Consensus 123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~IL 170 (560)
T KOG0600|consen 123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKIL 170 (560)
T ss_pred HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHH
Confidence 6699999999999984 579999999986554 44445556888887
No 255
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=98.70 E-value=3e-08 Score=101.13 Aligned_cols=46 Identities=26% Similarity=0.486 Sum_probs=38.9
Q ss_pred cchhhHhhhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 514 RFTYLELFQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 514 ~~~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
.+.++++.+++++|.-...||+|+||.||++... +|..+|+|.+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~ 53 (286)
T cd06638 7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDP 53 (286)
T ss_pred eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecc
Confidence 3556778889999999999999999999999874 578999998754
No 256
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=98.70 E-value=3e-08 Score=99.69 Aligned_cols=51 Identities=33% Similarity=0.499 Sum_probs=39.3
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
++|.-...+|+|+||.||+|... ++..+|+|.+........+.+..|++.+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l 54 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISML 54 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHH
Confidence 34666688999999999999875 4788999998765544556777777766
No 257
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.69 E-value=6.4e-08 Score=97.06 Aligned_cols=34 Identities=32% Similarity=0.599 Sum_probs=30.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+...+..+.++||||+||+++|++| |+.|++.
T Consensus 176 PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 210 (262)
T cd00192 176 PESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG 210 (262)
T ss_pred HHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCC
Confidence 787777788999999999999999999 5888764
No 258
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=98.69 E-value=2.8e-08 Score=100.88 Aligned_cols=34 Identities=21% Similarity=0.397 Sum_probs=30.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++..+.++|||||||+++|++||+.|...
T Consensus 170 PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 203 (277)
T cd06641 170 PEVIKQSAYDSKADIWSLGITAIELAKGEPPHSE 203 (277)
T ss_pred hhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCc
Confidence 8887778889999999999999999999999753
No 259
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=98.69 E-value=6.7e-08 Score=103.14 Aligned_cols=34 Identities=29% Similarity=0.416 Sum_probs=29.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..++.++.|+|||||||+++||+| |+.|+..
T Consensus 308 PE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~ 342 (400)
T cd05105 308 PESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPG 342 (400)
T ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcc
Confidence 676667778899999999999999997 8888764
No 260
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=98.69 E-value=8.6e-08 Score=96.98 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=27.6
Q ss_pred HhcccCCc--ccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGR--VSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~--~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..... ++.++|||||||+++|+++|+.|+.
T Consensus 179 PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~ 213 (272)
T cd06629 179 PEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWS 213 (272)
T ss_pred HHHhccccCCCCccchhHHHHHHHHHHHhCCCCCc
Confidence 66554433 7889999999999999999999975
No 261
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.69 E-value=2.5e-08 Score=102.14 Aligned_cols=45 Identities=31% Similarity=0.301 Sum_probs=35.3
Q ss_pred cEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
..||+|+||.||+|... +|..||||++..........|..|+..+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l 71 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIM 71 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHH
Confidence 46999999999999884 6899999998654444455677887655
No 262
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.68 E-value=2.5e-08 Score=106.12 Aligned_cols=50 Identities=26% Similarity=0.286 Sum_probs=36.7
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||++... .|..||||.+.... ......+.+|++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il 55 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDIL 55 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHH
Confidence 4556688999999999999864 58899999985432 12244567777765
No 263
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.68 E-value=2.2e-08 Score=102.24 Aligned_cols=50 Identities=24% Similarity=0.348 Sum_probs=37.7
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
+|.-.+.||+|+||.||+|... ++..||||+++... ......|..|++.+
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l 54 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVL 54 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHH
Confidence 4555678999999999999986 47899999886432 22345677887766
No 264
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.68 E-value=2e-08 Score=102.39 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=31.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||+..++..+.++|||||||+++|++||+.|++..
T Consensus 171 PE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~ 205 (284)
T cd06620 171 PERIQGGKYTVKSDVWSLGISIIELALGKFPFAFS 205 (284)
T ss_pred HHHHccCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 88877888899999999999999999999998753
No 265
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.68 E-value=2.4e-08 Score=103.53 Aligned_cols=33 Identities=12% Similarity=0.155 Sum_probs=28.3
Q ss_pred HhcccC-CcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~-~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+ ..++.++|||||||+++||+||+.|+.
T Consensus 184 PE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred cHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 776655 457899999999999999999999975
No 266
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=98.68 E-value=1.1e-07 Score=96.17 Aligned_cols=44 Identities=23% Similarity=0.260 Sum_probs=31.8
Q ss_pred EecccCceeEEEEEeCC---CcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 532 LIGRGGFGSVYKARIHD---GMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 532 ~ig~g~~g~vy~~~l~~---~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
.||+|+||.||+|+..+ +..+|+|++..... .....|.+|+..+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l 49 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPY 49 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHH
Confidence 58999999999998753 35799998865432 2334677777665
No 267
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.68 E-value=2.9e-08 Score=102.44 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=28.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..++.++.++|||||||+++||+| |+.|..
T Consensus 211 PE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 211 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred hHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 777777778999999999999999999 777764
No 268
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=98.68 E-value=2.5e-08 Score=101.92 Aligned_cols=33 Identities=27% Similarity=0.557 Sum_probs=28.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..++.++.++|||||||+++|+++ |+.|..
T Consensus 190 pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~ 223 (288)
T cd05061 190 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 223 (288)
T ss_pred HHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCC
Confidence 777777888999999999999999999 676764
No 269
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.67 E-value=3.6e-08 Score=100.38 Aligned_cols=45 Identities=36% Similarity=0.654 Sum_probs=36.0
Q ss_pred cEecccCceeEEEEEeCC-CcEEEEEEecccccchHHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
..||+|+||.||+|.... +..+|+|.+..........|..|++.+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l 56 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDIL 56 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 569999999999999864 778899998765555566788888766
No 270
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.67 E-value=3.4e-08 Score=100.69 Aligned_cols=50 Identities=28% Similarity=0.315 Sum_probs=37.2
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
+|.-...||+|+||.||+|+.. +|..||+|++.... ....+.|.+|++++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l 54 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRML 54 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHH
Confidence 3455578999999999999986 58999999885432 22345677888776
No 271
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.67 E-value=4.5e-08 Score=99.67 Aligned_cols=45 Identities=33% Similarity=0.523 Sum_probs=36.9
Q ss_pred chhhHhhhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 515 FTYLELFQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 515 ~~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
.++.++..+.+.|.....+|.|+||.||+|... ++..+|+|....
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~ 51 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDV 51 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEec
Confidence 456667677788888889999999999999974 578999998744
No 272
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.67 E-value=3.5e-08 Score=100.15 Aligned_cols=49 Identities=27% Similarity=0.579 Sum_probs=35.9
Q ss_pred CCcccEecccCceeEEEEEe-CCCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
|...+.||+|+||.||+|.. .+|..||||.+.... .....+|.+|++.+
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l 53 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALL 53 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHH
Confidence 45557899999999999997 468999999886432 22345566776654
No 273
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.67 E-value=4.4e-08 Score=98.01 Aligned_cols=49 Identities=33% Similarity=0.537 Sum_probs=38.4
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc--chHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR--GAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~--~~~~~f~~e~~~~ 575 (690)
|...+.||+|++|.||+|+.. ++..|+||++..... ...+.|.+|++.+
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 53 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRIL 53 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHH
Confidence 566688999999999999986 688999999865542 3456677777766
No 274
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.67 E-value=3.3e-08 Score=102.53 Aligned_cols=49 Identities=27% Similarity=0.396 Sum_probs=36.4
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
|...+.||+|+||.||+|+.. +|..||+|++.... ......|..|++.+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l 79 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFL 79 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHH
Confidence 555688999999999999964 57899999986432 22234677787766
No 275
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.67 E-value=3.3e-08 Score=101.15 Aligned_cols=51 Identities=25% Similarity=0.417 Sum_probs=37.1
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
++|.....||+|++|.||+|... ++..||||.+..... .....+..|++++
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l 57 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLL 57 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHH
Confidence 45666688999999999999975 578999999864332 2233456676655
No 276
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.67 E-value=7.1e-08 Score=98.22 Aligned_cols=35 Identities=31% Similarity=0.385 Sum_probs=29.5
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEeccc
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQ 560 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~ 560 (690)
+|.....||+|+||.||+|+.. +|..||+|++...
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~ 37 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRAT 37 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecC
Confidence 5666688999999999999975 5899999988653
No 277
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.66 E-value=2.4e-08 Score=106.35 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=30.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+..++.++|||||||+++||+||+.|..
T Consensus 252 PE~~~~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 252 PELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred hhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 888888889999999999999999999998854
No 278
>PHA02882 putative serine/threonine kinase; Provisional
Probab=98.66 E-value=5.1e-08 Score=99.92 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=31.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||+..+..++.++|||||||+++||+||+.|+...
T Consensus 202 pe~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 202 LDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 67777778899999999999999999999998754
No 279
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.66 E-value=2.4e-08 Score=100.81 Aligned_cols=50 Identities=40% Similarity=0.503 Sum_probs=35.8
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+|...+.||+|+||.||+|... ++..||+|.+..........+..|+..+
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~ 60 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMM 60 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHH
Confidence 3444577999999999999874 5889999988654433344566666544
No 280
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.65 E-value=2.8e-08 Score=101.48 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=28.9
Q ss_pred HhcccCC---cccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREG---RVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~---~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+. .++.++|||||||+++|++||+.|+.
T Consensus 176 PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 176 PERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred HHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 7776555 68899999999999999999999975
No 281
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.65 E-value=9.8e-08 Score=96.40 Aligned_cols=44 Identities=25% Similarity=0.255 Sum_probs=29.0
Q ss_pred EecccCceeEEEEEeCCC---cEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 532 LIGRGGFGSVYKARIHDG---MEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 532 ~ig~g~~g~vy~~~l~~~---~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
.||+|+||.||+|...++ ..+++|.+.... ....+.|.+|+..+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~ 49 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPY 49 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHH
Confidence 589999999999986443 346677665433 22345677776544
No 282
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.65 E-value=4e-08 Score=101.93 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=28.8
Q ss_pred HhcccC-CcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~-~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+ ..++.++||||+||+++||+||+.|+..
T Consensus 184 PE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 777655 3578899999999999999999999753
No 283
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=98.65 E-value=5.7e-08 Score=97.21 Aligned_cols=49 Identities=22% Similarity=0.424 Sum_probs=36.5
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
|...+.||+|+||.||++... ++..+|||++.... ....+.|..|++.+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 53 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVL 53 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHH
Confidence 445578999999999999874 57889999885432 22345677787766
No 284
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.64 E-value=4.4e-08 Score=102.56 Aligned_cols=53 Identities=19% Similarity=0.265 Sum_probs=38.1
Q ss_pred ccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 523 ATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 523 at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
.+++|.-.+.||+|+||.||+|+.. +|..||||++.... ......+..|+..+
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 57 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKIL 57 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHH
Confidence 3466777789999999999999864 68999999985422 22334566665544
No 285
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=98.64 E-value=2.6e-08 Score=101.29 Aligned_cols=50 Identities=30% Similarity=0.548 Sum_probs=38.9
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+|.-...||.|+||.||+|... ++..||+|..........+.|..|++.+
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l 56 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDIL 56 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHH
Confidence 3444467999999999999985 5889999998765555556788888766
No 286
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.64 E-value=5.2e-08 Score=100.01 Aligned_cols=48 Identities=29% Similarity=0.367 Sum_probs=34.0
Q ss_pred CCCcccEecccCceeEEEEEeCC-CcEEEEEEecccc-cchHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQY-RGAFKSFDIECD 573 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~-~~~~~~f~~e~~ 573 (690)
+|.-.+.||+|+||.||+|...+ |..||||++.... .....++..|++
T Consensus 16 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~ 65 (296)
T cd06618 16 DLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLD 65 (296)
T ss_pred hheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHH
Confidence 34555889999999999999975 8999999986432 122334444544
No 287
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.64 E-value=3.9e-08 Score=101.22 Aligned_cols=50 Identities=24% Similarity=0.346 Sum_probs=35.7
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
.|.....||+|+||.||+|... ++..||+|.+.... ......+..|++.+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l 58 (301)
T cd07873 7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLL 58 (301)
T ss_pred ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHH
Confidence 3555678999999999999875 57899999886432 22234566676655
No 288
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=98.64 E-value=9.5e-08 Score=100.27 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=28.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+..+..++.++|||||||+++|+++ |..|+..
T Consensus 250 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 284 (343)
T cd05103 250 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 284 (343)
T ss_pred cHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 566666777889999999999999997 8888753
No 289
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=98.64 E-value=1.7e-08 Score=107.46 Aligned_cols=49 Identities=27% Similarity=0.508 Sum_probs=38.0
Q ss_pred CCcccEecccCceeEEEEEe-CCCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
|.-+..+|+|+||.||+|+- ..|..||||.+.... ....+....|++++
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~Eieil 65 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEIL 65 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHH
Confidence 34457799999999999994 469999999987654 33355677888877
No 290
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.63 E-value=5.9e-09 Score=109.46 Aligned_cols=35 Identities=29% Similarity=0.472 Sum_probs=29.4
Q ss_pred Hhcc----cCCcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYG----REGRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~----~~~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||++ +.-.|++..||||||+-||||+|+..||..-
T Consensus 208 PEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC 246 (632)
T KOG0584|consen 208 PEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSEC 246 (632)
T ss_pred ccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhh
Confidence 5554 3467899999999999999999999999753
No 291
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=98.63 E-value=1.2e-07 Score=96.08 Aligned_cols=33 Identities=33% Similarity=0.583 Sum_probs=29.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..++..+.++|||||||+++|++| |+.|+.
T Consensus 190 PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 223 (277)
T cd05032 190 PESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQ 223 (277)
T ss_pred HHHHhcCCCCcccchHHHHHHHHHhhccCCCCCc
Confidence 777777889999999999999999999 888875
No 292
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.63 E-value=2.1e-08 Score=75.44 Aligned_cols=58 Identities=38% Similarity=0.533 Sum_probs=25.4
Q ss_pred cceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCCCCCCEEECcCCc
Q 042662 342 LIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLKSLNLSNNN 399 (690)
Q Consensus 342 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 399 (690)
|++|++++|+++...+..|.++++|++|++++|++....+..|..+++|++|++++|+
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 3444444444443333344444444444444444443334444444444444444443
No 293
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.63 E-value=3.8e-08 Score=102.58 Aligned_cols=58 Identities=26% Similarity=0.331 Sum_probs=43.8
Q ss_pred hHhhhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 518 LELFQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 518 ~~l~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
.++..++++|...+.||+|+||.||+|... +|..||||++.... ....+.+..|++++
T Consensus 3 ~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l 63 (328)
T cd07856 3 GTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLL 63 (328)
T ss_pred cceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHH
Confidence 355668888988899999999999999854 68999999875322 22345666777766
No 294
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.63 E-value=5.5e-08 Score=100.87 Aligned_cols=50 Identities=28% Similarity=0.463 Sum_probs=37.7
Q ss_pred CCCcccEecccCceeEEEEEeCC-CcEEEEEEeccccc---chHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYR---GAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~---~~~~~f~~e~~~~ 575 (690)
+|...+.||+|+||.||+|...+ +..||+|.+..... ...+.|..|++.+
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEIL 55 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHH
Confidence 46666889999999999999864 89999999865432 1345677777665
No 295
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=98.62 E-value=4.3e-08 Score=101.26 Aligned_cols=47 Identities=15% Similarity=0.181 Sum_probs=37.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCccCCCc--ccHHHHHH
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEVFSGE--MTLKRWVN 622 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~~~~~--~~l~~~~~ 622 (690)
||+..+..+...+|.||.||+++|++.|-.|+....+.. ..++.|..
T Consensus 357 PEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~ 405 (550)
T KOG0605|consen 357 PEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRE 405 (550)
T ss_pred hHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhh
Confidence 888888889999999999999999999999987543322 24666643
No 296
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.62 E-value=3e-08 Score=100.09 Aligned_cols=33 Identities=30% Similarity=0.607 Sum_probs=29.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..++.++.++|||||||+++||+| |+.|+.
T Consensus 182 PE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~ 215 (269)
T cd05044 182 PESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYP 215 (269)
T ss_pred HHHHccCCcccchhHHHHHHHHHHHHHcCCCCCc
Confidence 677777888999999999999999998 998875
No 297
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.62 E-value=7.4e-08 Score=98.25 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=30.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+...+.|+|||||||+++||+||+.|.+.
T Consensus 175 PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~ 208 (287)
T cd07838 175 PEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRG 208 (287)
T ss_pred hHHhccCCCCCcchhhhHHHHHHHHHhCCCcccC
Confidence 7888788889999999999999999999877653
No 298
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.62 E-value=2.7e-08 Score=92.77 Aligned_cols=42 Identities=14% Similarity=0.308 Sum_probs=35.0
Q ss_pred Hhcc---cCCcccccceEEehhHHHHHHhcCCCCCCccCCCcccH
Q 042662 576 KQYG---REGRVSTNGDVYSFGIMLMETFTRKKPTDEVFSGEMTL 617 (690)
Q Consensus 576 pe~~---~~~~~~~k~DvysfGv~llel~tg~~p~~~~~~~~~~l 617 (690)
||.. .+..+++|+|||||||+|++|+-|-.|++..+..|.++
T Consensus 207 PELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSl 251 (302)
T KOG2345|consen 207 PELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSL 251 (302)
T ss_pred chheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeE
Confidence 8865 45778999999999999999999999999776555443
No 299
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=98.62 E-value=4.7e-08 Score=96.56 Aligned_cols=36 Identities=36% Similarity=0.623 Sum_probs=29.2
Q ss_pred CCcccEecccCceeEEEEEeCC-CcEEEEEEeccccc
Q 042662 527 FSENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYR 562 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~ 562 (690)
+...+++|.|+||.||+|.+.. +..||||+...+..
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r 62 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR 62 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC
Confidence 4456899999999999999864 68999998855443
No 300
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.61 E-value=6.5e-08 Score=100.20 Aligned_cols=33 Identities=30% Similarity=0.448 Sum_probs=29.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~ 608 (690)
||+..++.++.++|||||||+++|++| |+.|+.
T Consensus 205 PE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~ 238 (314)
T cd05099 205 PEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYP 238 (314)
T ss_pred HHHHccCCcCccchhhHHHHHHHHHHhCCCCCCC
Confidence 777777788999999999999999999 888865
No 301
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.61 E-value=5.1e-08 Score=99.33 Aligned_cols=49 Identities=27% Similarity=0.339 Sum_probs=34.5
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
|.....||+|+||.||+|+.. +|..||+|++.... ......+.+|++.+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l 53 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLL 53 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHH
Confidence 334477999999999999975 58899999885432 12234456666555
No 302
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.61 E-value=7.6e-08 Score=96.41 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=30.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..++.++.++|||||||+++|++||+.|++
T Consensus 171 PE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~ 203 (257)
T cd08223 171 PELFSNKPYNYKSDVWALGCCVYEMATLKHAFN 203 (257)
T ss_pred hhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 888888888999999999999999999999976
No 303
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=98.61 E-value=2.7e-08 Score=96.66 Aligned_cols=50 Identities=22% Similarity=0.275 Sum_probs=36.2
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccccc--hHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRG--AFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~--~~~~f~~e~~~~ 575 (690)
+|..-|.|++|.||.||||+-. ++..||.|+++....+ -.-.-.+||.++
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniL 129 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINIL 129 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHH
Confidence 3444588999999999999974 5789999999765422 122346777766
No 304
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=98.61 E-value=8.7e-08 Score=96.67 Aligned_cols=50 Identities=26% Similarity=0.389 Sum_probs=37.8
Q ss_pred CCCcccEecccCceeEEEEEe-CCCcEEEEEEeccccc------chHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQYR------GAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~~------~~~~~f~~e~~~~ 575 (690)
+|...+.||+|+||.||+|.. .++..||+|++..... ...+.|..|++.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l 57 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLM 57 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHH
Confidence 366678899999999999986 4688999998864321 1245688888776
No 305
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.61 E-value=7.4e-08 Score=98.52 Aligned_cols=50 Identities=22% Similarity=0.269 Sum_probs=37.3
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|.-...||+|+||.||++... +++.||||++.... ......+..|++.+
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l 55 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRIL 55 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH
Confidence 4555678999999999999975 58999999885432 22345677787766
No 306
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.61 E-value=2.3e-07 Score=96.98 Aligned_cols=82 Identities=13% Similarity=0.050 Sum_probs=50.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCccCCCcccHHHHHHhhCCCCccccccccccCCcccccccHHHHHHH
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDEVFSGEMTLKRWVNDFLPISVMEVVDTNLLSQEDKHFTTKEQFMKV 654 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~D~~l~~~~~~~~~~~~~~~~~ 654 (690)
||+..+..++.++|||||||+++||++ |+.|+.. ....++..........+. .. .....+
T Consensus 205 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~-----~~~~~~~~~~~~~~~~~~-----~~---------~~~~~l 265 (334)
T cd05100 205 PEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG-----IPVEELFKLLKEGHRMDK-----PA---------NCTHEL 265 (334)
T ss_pred HHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC-----CCHHHHHHHHHcCCCCCC-----CC---------CCCHHH
Confidence 666667778889999999999999999 7777642 233344333222111110 00 112245
Q ss_pred HHHHhcch----------HHHHHHHHhhhhhh
Q 042662 655 IDANLLTR----------EDNYFMTKEQRVSL 676 (690)
Q Consensus 655 ~~~al~C~----------~~v~~~L~~~~~~~ 676 (690)
.++...|+ .|+++.|+++....
T Consensus 266 ~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 266 YMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 56666777 78888888776433
No 307
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.61 E-value=3.4e-08 Score=103.09 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=29.1
Q ss_pred HhcccCC-cccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~-~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||...+. .++.++|||||||+++||+||+.|+..
T Consensus 165 PE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 165 PEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred HHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 7876554 378999999999999999999999753
No 308
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=98.61 E-value=9.8e-08 Score=96.25 Aligned_cols=34 Identities=21% Similarity=0.460 Sum_probs=29.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++..+.++|||||||+++||+||+.|++.
T Consensus 181 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 214 (267)
T cd06628 181 PEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPD 214 (267)
T ss_pred hhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 5666666778899999999999999999999864
No 309
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.60 E-value=5.8e-08 Score=101.08 Aligned_cols=82 Identities=27% Similarity=0.345 Sum_probs=68.5
Q ss_pred CCcccEecccCceeEEEEEe-CCCcEEEEEEecccccchHHHHHHHHHHH------------------------------
Q 042662 527 FSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQYRGAFKSFDIECDMM------------------------------ 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~~~~~~~f~~e~~~~------------------------------ 575 (690)
|..-..||+|+.|.||-|.- ..+..||||+++.......+-..+|+.+|
T Consensus 275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~g 354 (550)
T KOG0578|consen 275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEG 354 (550)
T ss_pred hcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCC
Confidence 33446799999999999874 46889999999776554444566787777
Q ss_pred --------------------------------------------------------------------------------
Q 042662 576 -------------------------------------------------------------------------------- 575 (690)
Q Consensus 576 -------------------------------------------------------------------------------- 575 (690)
T Consensus 355 gsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPY 434 (550)
T KOG0578|consen 355 GSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPY 434 (550)
T ss_pred CchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCC
Confidence
Q ss_pred ---HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 ---KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 ---pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||......+..|.||||+||+++||+-|..||-
T Consensus 435 WMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYl 470 (550)
T KOG0578|consen 435 WMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYL 470 (550)
T ss_pred ccchhhhhhcccCccccchhhhhHHHHHhcCCCCcc
Confidence 899988999999999999999999999999985
No 310
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.59 E-value=7.2e-08 Score=98.16 Aligned_cols=47 Identities=32% Similarity=0.430 Sum_probs=35.5
Q ss_pred cccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 529 ENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 529 ~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
..+.||.|++|.||+|... +|..||||++.... ....+.|.+|++.+
T Consensus 3 ~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l 52 (283)
T cd07835 3 KVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLL 52 (283)
T ss_pred hheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHH
Confidence 3477999999999999875 68999999986443 22335677787766
No 311
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.59 E-value=5.1e-08 Score=106.93 Aligned_cols=34 Identities=26% Similarity=0.468 Sum_probs=31.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|++.
T Consensus 240 PE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~ 273 (478)
T PTZ00267 240 PELWERKRYSKKADMWSLGVILYELLTLHRPFKG 273 (478)
T ss_pred HhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 8888888899999999999999999999999863
No 312
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=98.59 E-value=1.9e-07 Score=94.66 Aligned_cols=50 Identities=28% Similarity=0.403 Sum_probs=37.2
Q ss_pred CCCcccEecccCceeEEEEEeC------CCcEEEEEEecccccc-hHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH------DGMEAAVKVFDLQYRG-AFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~------~~~~vavk~~~~~~~~-~~~~f~~e~~~~ 575 (690)
+|.....+|+|+||.||+|+.. +...||+|.+...... ..++|..|++++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l 62 (275)
T cd05046 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMF 62 (275)
T ss_pred hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHH
Confidence 4566678999999999999964 3467999988654433 345688887766
No 313
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.59 E-value=7.9e-08 Score=97.02 Aligned_cols=49 Identities=24% Similarity=0.388 Sum_probs=38.4
Q ss_pred CCcccEecccCceeEEEEEe-CCCcEEEEEEecccccch-HHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQYRGA-FKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~~~~-~~~f~~e~~~~ 575 (690)
|.-..+||.|..++||+|.. +.+..||||+++...... .+...+|+..|
T Consensus 28 YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~m 78 (516)
T KOG0582|consen 28 YELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTM 78 (516)
T ss_pred eeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHh
Confidence 33347899999999999984 678999999998765333 46778888877
No 314
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.59 E-value=2.2e-07 Score=93.86 Aligned_cols=44 Identities=25% Similarity=0.221 Sum_probs=31.1
Q ss_pred EecccCceeEEEEEeCC---CcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 532 LIGRGGFGSVYKARIHD---GMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 532 ~ig~g~~g~vy~~~l~~---~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
.||+|+||.||+|...+ ...+|||.+.... ......|.+|++.+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~ 49 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPY 49 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHH
Confidence 48999999999998644 3568888775433 22345677887765
No 315
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.58 E-value=8.1e-08 Score=97.91 Aligned_cols=49 Identities=29% Similarity=0.453 Sum_probs=35.9
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
|...+.||+|++|.||+|+.. +|..||||++.... ....+.+.+|+..+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 53 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLL 53 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHH
Confidence 445578999999999999975 58899999885432 22235566777665
No 316
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.58 E-value=1.3e-07 Score=96.07 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=29.5
Q ss_pred HhcccC-CcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~-~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||...+ ..++.++|||||||+++||+||+.|+...
T Consensus 164 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 199 (279)
T cd05633 164 PEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (279)
T ss_pred HHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCC
Confidence 777654 45789999999999999999999998643
No 317
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=98.58 E-value=8.8e-08 Score=98.77 Aligned_cols=50 Identities=28% Similarity=0.453 Sum_probs=37.4
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|...+.+|+|+||.||++... .+..||||.+.... ......|.+|++.+
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l 55 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDIL 55 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHH
Confidence 5666788999999999999975 47899999886543 22345677777665
No 318
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.58 E-value=7.8e-08 Score=98.56 Aligned_cols=51 Identities=27% Similarity=0.411 Sum_probs=37.4
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
++|.....||+|++|.||+|... +|+.||||++.... ....+.|..|++.+
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l 55 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLL 55 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHH
Confidence 35666788999999999999975 68899999875432 22235567777665
No 319
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.57 E-value=3.4e-08 Score=99.14 Aligned_cols=50 Identities=36% Similarity=0.555 Sum_probs=37.3
Q ss_pred CCCcccEecccCceeEEEEEeCC-CcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
++...+.||+|+||+||.+...+ |...|||..........+...+|+.++
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL 68 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRIL 68 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHH
Confidence 35556889999999999999865 899999988655322245566777666
No 320
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.57 E-value=9.7e-08 Score=97.42 Aligned_cols=47 Identities=30% Similarity=0.550 Sum_probs=34.8
Q ss_pred cccEecccCceeEEEEEeC-CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 529 ENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 529 ~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
-.+.||+|+||.||++... .|..||+|.+.... ......|.+|++.+
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l 53 (286)
T cd06622 5 VLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDIL 53 (286)
T ss_pred hhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHH
Confidence 3467999999999999986 68999999886432 22245677777655
No 321
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.57 E-value=9.3e-08 Score=98.02 Aligned_cols=50 Identities=30% Similarity=0.422 Sum_probs=35.0
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc--chHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR--GAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~--~~~~~f~~e~~~~ 575 (690)
+|...+.||+|+||.||+|... +|..||||+...... .....+..|++.+
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l 54 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLL 54 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHH
Confidence 5677789999999999999975 588999998753321 1223455555444
No 322
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=98.57 E-value=7.1e-08 Score=100.53 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=28.6
Q ss_pred HhcccC--CcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGRE--GRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~--~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+ ..++.++|||||||+++||+||+.|++.
T Consensus 177 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 177 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred hHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 666544 3578999999999999999999999864
No 323
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.57 E-value=9.8e-08 Score=96.89 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=30.9
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++..+.++|||||||+++|++||+.|+..
T Consensus 163 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 196 (277)
T cd05577 163 PEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQ 196 (277)
T ss_pred HHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 8888788889999999999999999999999754
No 324
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=98.57 E-value=8.6e-08 Score=95.97 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=30.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+...+.++|||||||+++||+||+.|++.
T Consensus 169 PE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~ 202 (255)
T cd08219 169 PEIWENMPYNNKSDIWSLGCILYELCTLKHPFQA 202 (255)
T ss_pred HHHHccCCcCchhhhhhhchhheehhhccCCCCC
Confidence 7877777889999999999999999999999863
No 325
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=98.57 E-value=9.1e-08 Score=102.08 Aligned_cols=34 Identities=38% Similarity=0.470 Sum_probs=27.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||+...+.++.++|||||||+++|++| |+.|+..
T Consensus 310 PE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~ 344 (401)
T cd05107 310 PESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPE 344 (401)
T ss_pred hHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCC
Confidence 444445556788999999999999998 8888753
No 326
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=98.56 E-value=9.4e-08 Score=90.16 Aligned_cols=47 Identities=30% Similarity=0.449 Sum_probs=34.9
Q ss_pred cccEecccCceeEEEEEe-CCCcEEEEEEeccccc--chHHHHHHHHHHH
Q 042662 529 ENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQYR--GAFKSFDIECDMM 575 (690)
Q Consensus 529 ~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~~--~~~~~f~~e~~~~ 575 (690)
....+|+|.||.||||+- ..|+.||||+++.... +-...-.+||+.+
T Consensus 6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~L 55 (318)
T KOG0659|consen 6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLL 55 (318)
T ss_pred hhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHH
Confidence 346799999999999995 4689999999976542 2244456677665
No 327
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.56 E-value=6.6e-08 Score=104.59 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=29.9
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+..++.++|||||||+++||++|..|..
T Consensus 331 PE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 331 PEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred HHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 888888889999999999999999999987753
No 328
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.56 E-value=1.2e-07 Score=98.03 Aligned_cols=47 Identities=26% Similarity=0.338 Sum_probs=34.3
Q ss_pred cccEecccCceeEEEEEeC-CCcEEEEEEeccccc---chHHHHHHHHHHH
Q 042662 529 ENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR---GAFKSFDIECDMM 575 (690)
Q Consensus 529 ~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~---~~~~~f~~e~~~~ 575 (690)
..+.+|+|+||.||+|+.. +|..||+|++..... ...+.+..|++.+
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l 75 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFL 75 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHH
Confidence 3467999999999999874 578999999864322 2234567777666
No 329
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.56 E-value=1.6e-07 Score=94.84 Aligned_cols=48 Identities=19% Similarity=0.236 Sum_probs=37.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCccCCCcccHHHHHHh
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEVFSGEMTLKRWVND 623 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~~~~~~~l~~~~~~ 623 (690)
||+..++..+.++|||||||+++|++||+.|+.....+......|...
T Consensus 175 PE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 222 (267)
T PHA03390 175 PEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR 222 (267)
T ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh
Confidence 888888888999999999999999999999987544344344555443
No 330
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.55 E-value=1.1e-07 Score=96.80 Aligned_cols=50 Identities=28% Similarity=0.424 Sum_probs=37.0
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc-chHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR-GAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~-~~~~~f~~e~~~~ 575 (690)
+|...+.||.|++|.||+|+.. +|..||||++..... .....+..|++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l 52 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLM 52 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHH
Confidence 3556688999999999999985 588999998865432 2234566676655
No 331
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=98.55 E-value=9.8e-08 Score=96.01 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=27.0
Q ss_pred Hhccc-CCcccccceEEehhHHHHHHh-cCCCCCC
Q 042662 576 KQYGR-EGRVSTNGDVYSFGIMLMETF-TRKKPTD 608 (690)
Q Consensus 576 pe~~~-~~~~~~k~DvysfGv~llel~-tg~~p~~ 608 (690)
||+.. ++.++.++|||||||+++||+ +|+.|..
T Consensus 177 PE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 211 (262)
T cd05077 177 PECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLK 211 (262)
T ss_pred hhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 77665 466888999999999999998 5777764
No 332
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.55 E-value=8.1e-08 Score=102.72 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=30.9
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|...
T Consensus 256 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 289 (392)
T PHA03207 256 PELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFG 289 (392)
T ss_pred HhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 7888788889999999999999999999999754
No 333
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.55 E-value=1.3e-07 Score=96.02 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=29.8
Q ss_pred HhcccCC-cccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~~-~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||+..++ .++.++|||||||+++||+||+.|++..
T Consensus 164 PE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 164 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred cHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 7776544 5789999999999999999999998643
No 334
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.54 E-value=1.4e-07 Score=99.00 Aligned_cols=49 Identities=22% Similarity=0.146 Sum_probs=34.6
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccccchHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGAFKSFDIECD 573 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~~~~f~~e~~ 573 (690)
..|...+.||.|+||.||+|... +|..||+|++........+.+.+|++
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~ 54 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIK 54 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHH
Confidence 34666688999999999999874 58899999885543333344444443
No 335
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.54 E-value=1.4e-07 Score=96.51 Aligned_cols=49 Identities=22% Similarity=0.358 Sum_probs=35.4
Q ss_pred CCcccEecccCceeEEEEEe----CCCcEEEEEEecccc----cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARI----HDGMEAAVKVFDLQY----RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l----~~~~~vavk~~~~~~----~~~~~~f~~e~~~~ 575 (690)
|.-...||+|+||.||++.. ++|..||+|++.... ....+.+..|++.+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l 58 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 58 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHH
Confidence 34457899999999999986 468999999986432 22345567777665
No 336
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.54 E-value=1.4e-07 Score=99.41 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=30.4
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+..++.++|||||||+++||+||+.|+.
T Consensus 186 PE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~ 218 (353)
T cd07850 186 PEVILGMGYKENVDIWSVGCIMGEMIRGTVLFP 218 (353)
T ss_pred HHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCC
Confidence 888888889999999999999999999999875
No 337
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.53 E-value=4e-08 Score=91.22 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=32.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||...+...+.+.|+|+.||+..|++.|..|+...
T Consensus 191 pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~ 225 (281)
T KOG0580|consen 191 PEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQ 225 (281)
T ss_pred HhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhh
Confidence 89988889999999999999999999999998743
No 338
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.53 E-value=1e-07 Score=98.39 Aligned_cols=49 Identities=29% Similarity=0.410 Sum_probs=35.6
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
|...+.+|+|+||.||+|... ++..||||.+.... ....++|..|++.+
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l 69 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHH
Confidence 444577999999999999974 57889999885422 22345677787766
No 339
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.53 E-value=1.3e-07 Score=96.44 Aligned_cols=46 Identities=30% Similarity=0.398 Sum_probs=34.3
Q ss_pred ccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
.+.||+|+||.||+|+.. +|..+|||++.... ....+.|.+|++.+
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l 52 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLL 52 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHH
Confidence 467999999999999976 47899999996553 22344566676554
No 340
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.53 E-value=1.5e-07 Score=94.61 Aligned_cols=34 Identities=15% Similarity=0.086 Sum_probs=30.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++..+.++|||||||+++|++||+.|+..
T Consensus 162 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 195 (260)
T cd05611 162 PETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHA 195 (260)
T ss_pred hhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCC
Confidence 7777667789999999999999999999999863
No 341
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=98.53 E-value=1e-08 Score=97.66 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=31.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+...--+..++|+||+||.-.||.-||.||.+
T Consensus 198 PEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsD 231 (502)
T KOG0574|consen 198 PEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSD 231 (502)
T ss_pred HHHHHHhccchhhhHhhhcchhhhhhcCCCCccc
Confidence 8888888889999999999999999999999864
No 342
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.53 E-value=1.6e-07 Score=94.34 Aligned_cols=34 Identities=21% Similarity=0.148 Sum_probs=28.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+......+.++||||||++++|++||+.|++.
T Consensus 170 Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~ 203 (265)
T cd05579 170 PEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHG 203 (265)
T ss_pred HHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 4555555677899999999999999999999864
No 343
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.53 E-value=1.8e-07 Score=97.76 Aligned_cols=51 Identities=22% Similarity=0.269 Sum_probs=37.3
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
++|...+.||+|+||.||+|... +|..||+|++.... ....+.+..|++.+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l 58 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKIL 58 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHH
Confidence 56777788999999999999875 58999999986432 12334555666554
No 344
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.52 E-value=2.1e-07 Score=92.85 Aligned_cols=49 Identities=39% Similarity=0.543 Sum_probs=38.0
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc--chHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR--GAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~--~~~~~f~~e~~~~ 575 (690)
|.-...||+|++|.||+|+.. ++..||||.+..... .....|.+|++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 53 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLL 53 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHH
Confidence 445578999999999999875 578999999866543 3456788888766
No 345
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=98.52 E-value=6.6e-08 Score=97.98 Aligned_cols=34 Identities=32% Similarity=0.490 Sum_probs=26.9
Q ss_pred HhcccC-CcccccceEEehhHHHHHH-hcCCCCCCc
Q 042662 576 KQYGRE-GRVSTNGDVYSFGIMLMET-FTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~-~~~~~k~DvysfGv~llel-~tg~~p~~~ 609 (690)
||+..+ ..++.++|||||||+++|+ ++|+.|+..
T Consensus 189 Pe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~ 224 (274)
T cd05076 189 PECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKE 224 (274)
T ss_pred chhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccc
Confidence 665543 4578899999999999998 478888753
No 346
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=98.52 E-value=2.1e-07 Score=93.20 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=36.4
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
|...++||.|+||.||.+... ++..|++|++.... ....++|.+|++.+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l 53 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVIL 53 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHH
Confidence 445588999999988877753 58889999876432 33456788888777
No 347
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.52 E-value=1.3e-07 Score=97.77 Aligned_cols=36 Identities=36% Similarity=0.564 Sum_probs=30.4
Q ss_pred cCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 524 TNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 524 t~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
.++|...+.||+|+||.||+|... +|..||+|++..
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~ 42 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRM 42 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEe
Confidence 456777789999999999999985 589999998854
No 348
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.52 E-value=1.5e-07 Score=95.75 Aligned_cols=33 Identities=24% Similarity=0.208 Sum_probs=29.0
Q ss_pred HhcccCC-cccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREG-RVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~-~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+. ..+.++|||||||+++|++||+.|+.
T Consensus 167 PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~ 200 (282)
T cd07829 167 PEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFP 200 (282)
T ss_pred hHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 7776655 78999999999999999999988875
No 349
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.51 E-value=9e-08 Score=101.00 Aligned_cols=32 Identities=19% Similarity=0.347 Sum_probs=29.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPT 607 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~ 607 (690)
||+..+..++.++|||||||+++||+++..|.
T Consensus 225 PE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 225 PEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred CeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 88888889999999999999999999987765
No 350
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.51 E-value=1.5e-07 Score=94.44 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=32.1
Q ss_pred Hhccc-CCcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGR-EGRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~-~~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||+.. +...+.++||||+|++++||+||+.|+...
T Consensus 167 PE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 167 PEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp HHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred cccccccccccccccccccccccccccccccccccc
Confidence 89887 889999999999999999999999998743
No 351
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.50 E-value=1.8e-07 Score=98.16 Aligned_cols=56 Identities=18% Similarity=0.320 Sum_probs=38.9
Q ss_pred hhhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 520 LFQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 520 l~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
+....+.|...+.||+|+||.||+|... +|..||||++.... ......+..|++.+
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l 68 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLL 68 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHH
Confidence 3445666777789999999999999854 68999999885322 11233455665544
No 352
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.50 E-value=2.1e-07 Score=93.58 Aligned_cols=34 Identities=15% Similarity=0.240 Sum_probs=30.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+...+.++.++|||||||+++|++||+.|++.
T Consensus 179 pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 179 PEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred hhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 7777777788999999999999999999999864
No 353
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.50 E-value=2.4e-07 Score=93.08 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=30.5
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+......+.++|||||||+++|++||+.|+..
T Consensus 161 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 194 (262)
T cd05572 161 PEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE 194 (262)
T ss_pred hhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCC
Confidence 7777777889999999999999999999999864
No 354
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.49 E-value=2.5e-07 Score=93.57 Aligned_cols=39 Identities=38% Similarity=0.622 Sum_probs=32.7
Q ss_pred hhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 521 FQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 521 ~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
..++++|.-...+|+|++|.||+|... ++..+|+|++..
T Consensus 2 ~~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~ 41 (275)
T cd06608 2 PDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDI 41 (275)
T ss_pred CCchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEec
Confidence 356778888899999999999999985 578899998754
No 355
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.49 E-value=2.5e-07 Score=92.57 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=30.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++||||||++++|+++|+.|.+.
T Consensus 170 Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~ 203 (256)
T cd08530 170 PEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEA 203 (256)
T ss_pred HHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 7777778888999999999999999999999763
No 356
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.49 E-value=2.8e-07 Score=92.10 Aligned_cols=49 Identities=29% Similarity=0.394 Sum_probs=36.2
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc--chHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR--GAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~--~~~~~f~~e~~~~ 575 (690)
|.-.+.||+|+||.||++... ++..+|+|++..... ...+++..|++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 53 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKIL 53 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHH
Confidence 445578999999999999986 488999999865432 3345566666654
No 357
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.48 E-value=2.1e-07 Score=96.17 Aligned_cols=36 Identities=33% Similarity=0.483 Sum_probs=30.3
Q ss_pred cCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 524 TNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 524 t~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
+++|.-.+.||+|+||.||+|+.. ++..||||++..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~ 43 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILM 43 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEe
Confidence 467777789999999999999975 578999998743
No 358
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.47 E-value=2.7e-07 Score=92.37 Aligned_cols=46 Identities=30% Similarity=0.524 Sum_probs=35.8
Q ss_pred ccEecccCceeEEEEEeCC-----CcEEEEEEecccccc-hHHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIHD-----GMEAAVKVFDLQYRG-AFKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~~-----~~~vavk~~~~~~~~-~~~~f~~e~~~~ 575 (690)
.+.||.|+||.||++...+ +..||+|++...... ..+.|..|++.+
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l 55 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIM 55 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHH
Confidence 3679999999999999864 488999999665433 456788887766
No 359
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.47 E-value=2.4e-07 Score=95.19 Aligned_cols=49 Identities=27% Similarity=0.360 Sum_probs=35.0
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccccc-----hHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRG-----AFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~-----~~~~f~~e~~~~ 575 (690)
|.-.+.||+|+||.||+|... +|+.||||++...... ....+..|++.+
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l 56 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLL 56 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHH
Confidence 444578999999999999975 5899999998654322 233455666555
No 360
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.47 E-value=2.5e-07 Score=95.16 Aligned_cols=37 Identities=38% Similarity=0.546 Sum_probs=31.1
Q ss_pred ccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 523 ATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 523 at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
+.++|.-.+.+|+|+||.||+|+.. +|..||||+++.
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~ 42 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRL 42 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEee
Confidence 4556777789999999999999985 588999998854
No 361
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.47 E-value=2.4e-07 Score=94.41 Aligned_cols=48 Identities=27% Similarity=0.288 Sum_probs=36.3
Q ss_pred CcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 528 SENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 528 ~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
.-.+.||+|+||.||+|+.. +|..||||++.... ......|.+|+..+
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l 53 (286)
T cd07832 3 KILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKAL 53 (286)
T ss_pred eEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHH
Confidence 33467999999999999974 68999999986543 23345677787765
No 362
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.47 E-value=5.6e-08 Score=97.52 Aligned_cols=44 Identities=30% Similarity=0.421 Sum_probs=31.7
Q ss_pred EecccCceeEEEEEeCC--------CcEEEEEEecccccchHHHHHHHHHHH
Q 042662 532 LIGRGGFGSVYKARIHD--------GMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 532 ~ig~g~~g~vy~~~l~~--------~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
.||+|+||.||+|.... ...||+|.+........++|..|+..+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l 53 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMM 53 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHH
Confidence 58999999999998632 234888887655444456677777666
No 363
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.46 E-value=2.1e-07 Score=104.45 Aligned_cols=34 Identities=32% Similarity=0.473 Sum_probs=30.5
Q ss_pred HhcccCCcccccceEEehhHHHHHHhc-CCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~t-g~~p~~~ 609 (690)
||......+|.|+|||||||+|+|++| |..|+..
T Consensus 490 pEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 490 PESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred HHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence 788888899999999999999999999 7888753
No 364
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=98.46 E-value=1.9e-07 Score=88.30 Aligned_cols=28 Identities=32% Similarity=0.465 Sum_probs=25.0
Q ss_pred CcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 582 GRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 582 ~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
.+++.++|||||||.|.||.||+.|+..
T Consensus 269 ~kYDiRaDVWSlGITlveLaTg~yPy~~ 296 (391)
T KOG0983|consen 269 PKYDIRADVWSLGITLVELATGQYPYKG 296 (391)
T ss_pred CccchhhhhhhhccchhhhhcccCCCCC
Confidence 4667789999999999999999999864
No 365
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.46 E-value=2.7e-07 Score=94.27 Aligned_cols=49 Identities=22% Similarity=0.349 Sum_probs=34.3
Q ss_pred CCcccEecccCceeEEEEEe----CCCcEEEEEEecccc----cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARI----HDGMEAAVKVFDLQY----RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l----~~~~~vavk~~~~~~----~~~~~~f~~e~~~~ 575 (690)
|.-...||+|+||.||+++. .++..||||.+.... ....+.|..|++.+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l 58 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVL 58 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHH
Confidence 34457899999999999885 357889999885322 22344567777655
No 366
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.46 E-value=3.3e-07 Score=95.96 Aligned_cols=52 Identities=23% Similarity=0.296 Sum_probs=35.6
Q ss_pred cCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 524 TNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 524 t~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
.+.|.....||+|+||+||+|... +|..||||++.... ......+..|++.+
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l 58 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLL 58 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHH
Confidence 345666788999999999999864 58999999885421 22233444554443
No 367
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.45 E-value=3e-07 Score=94.97 Aligned_cols=35 Identities=31% Similarity=0.471 Sum_probs=29.1
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
++|.....||+|+||.||+|... +|..||||++..
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~ 47 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLM 47 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEec
Confidence 34666788999999999999975 588999998743
No 368
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.45 E-value=1.5e-07 Score=85.53 Aligned_cols=28 Identities=29% Similarity=0.433 Sum_probs=25.9
Q ss_pred cccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 583 RVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 583 ~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
.++.|+||||+||.+.||.++|.||+.-
T Consensus 228 gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 228 GYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred cceeehhhhhhhhhhhhhhhcccccccc
Confidence 6889999999999999999999999853
No 369
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.45 E-value=4e-07 Score=92.69 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=27.1
Q ss_pred Hhcc-cCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYG-REGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~-~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+. .....+.++|||||||+++||+||+.|..
T Consensus 167 PE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~ 200 (283)
T cd07830 167 PEILLRSTSYSSPVDIWALGCIMAELYTLRPLFP 200 (283)
T ss_pred ceeeecCcCcCCccchhhHHHHHHHHHhCCCccC
Confidence 6654 33457899999999999999999998764
No 370
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.44 E-value=2.4e-07 Score=94.86 Aligned_cols=51 Identities=25% Similarity=0.379 Sum_probs=36.0
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc--chHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR--GAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~--~~~~~f~~e~~~~ 575 (690)
++|...+.||+|+||.||+|... ++..+|||++..... .....+.+|++.+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 58 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINIL 58 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHH
Confidence 35666688999999999999986 488999998864332 1223455566544
No 371
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.43 E-value=3.4e-07 Score=93.16 Aligned_cols=46 Identities=35% Similarity=0.500 Sum_probs=34.4
Q ss_pred ccEecccCceeEEEEEeC-CCcEEEEEEeccccc--chHHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR--GAFKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~--~~~~~f~~e~~~~ 575 (690)
...||+|++|.||+|... +|..+|+|++..... .....+..|++.+
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l 52 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLL 52 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHH
Confidence 367999999999999875 688999998865432 2345666776655
No 372
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.43 E-value=2.8e-07 Score=96.77 Aligned_cols=38 Identities=21% Similarity=0.396 Sum_probs=31.5
Q ss_pred hccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 522 QATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 522 ~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
...++|.....||+|++|.||+|... ++..||||++..
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~ 50 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSR 50 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccc
Confidence 34566777789999999999999985 578999998754
No 373
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.43 E-value=4.6e-07 Score=88.48 Aligned_cols=48 Identities=31% Similarity=0.415 Sum_probs=37.0
Q ss_pred CcccEecccCceeEEEEEeCC-CcEEEEEEecccccc-hHHHHHHHHHHH
Q 042662 528 SENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYRG-AFKSFDIECDMM 575 (690)
Q Consensus 528 ~~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~~-~~~~f~~e~~~~ 575 (690)
+..+.||+|++|.||+|...+ +..+|||.+...... ..+.+.+|++.+
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~ 51 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRIL 51 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHH
Confidence 345789999999999999976 889999998765443 455677776655
No 374
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.42 E-value=4.2e-07 Score=94.83 Aligned_cols=49 Identities=22% Similarity=0.262 Sum_probs=34.7
Q ss_pred CCcccEecccCceeEEEEEeCC-CcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
|.-...||+|+||.||+|...+ |..||||++.... ....+.|..|++.+
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l 53 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLL 53 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHH
Confidence 3445789999999999999864 8899999886533 22334565665544
No 375
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.42 E-value=4.6e-07 Score=98.15 Aligned_cols=37 Identities=16% Similarity=0.422 Sum_probs=30.9
Q ss_pred ccCCCCcccEecccCceeEEEEEe-----------------CCCcEEEEEEecc
Q 042662 523 ATNGFSENNLIGRGGFGSVYKARI-----------------HDGMEAAVKVFDL 559 (690)
Q Consensus 523 at~~f~~~~~ig~g~~g~vy~~~l-----------------~~~~~vavk~~~~ 559 (690)
.+++|...++||+|+||+||||.+ .+++.||||++..
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~ 196 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNM 196 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecc
Confidence 467899999999999999999975 2457899999753
No 376
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.41 E-value=4.4e-07 Score=94.00 Aligned_cols=35 Identities=11% Similarity=0.101 Sum_probs=27.9
Q ss_pred HhcccC-CcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~-~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||+..+ ..++.++|||||||+++||+||+.|+...
T Consensus 184 PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 219 (316)
T cd07842 184 PELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR 219 (316)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 555444 34688999999999999999999997643
No 377
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.40 E-value=3e-07 Score=92.19 Aligned_cols=33 Identities=27% Similarity=0.533 Sum_probs=27.1
Q ss_pred HhcccCC--cccccceEEehhHHHHHHhcC-CCCCC
Q 042662 576 KQYGREG--RVSTNGDVYSFGIMLMETFTR-KKPTD 608 (690)
Q Consensus 576 pe~~~~~--~~~~k~DvysfGv~llel~tg-~~p~~ 608 (690)
||+.... .++.++|||||||+++|+++| ..|..
T Consensus 173 PE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~ 208 (259)
T cd05037 173 PECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLS 208 (259)
T ss_pred hhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcc
Confidence 7776655 789999999999999999995 55554
No 378
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.40 E-value=5.2e-07 Score=91.54 Aligned_cols=50 Identities=28% Similarity=0.446 Sum_probs=35.8
Q ss_pred CCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
+|.-...||+|+||.||+|+.. +|..||+|++.... ....+.+..|++++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~ 55 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVL 55 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHH
Confidence 4555678999999999999985 68999999886432 22234566665554
No 379
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=98.40 E-value=3.4e-07 Score=104.89 Aligned_cols=52 Identities=21% Similarity=0.265 Sum_probs=36.5
Q ss_pred cCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 524 TNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 524 t~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
.+.|.-...||+|+||+||++... .+..||+|.+.... ......|..|+.++
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL 66 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVM 66 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHH
Confidence 345666688999999999999975 46788999875322 22234566676655
No 380
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.40 E-value=4.9e-07 Score=91.92 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=28.4
Q ss_pred Hhccc-CCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGR-EGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~-~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+.. .+..+.++|||||||+++||+||+.|+..
T Consensus 167 PE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~ 201 (282)
T cd07831 167 PECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPG 201 (282)
T ss_pred hhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCC
Confidence 77543 45578899999999999999999998853
No 381
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.39 E-value=5.7e-07 Score=89.60 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=30.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||...+...+.++||||||++++|+++|+.|++.
T Consensus 162 Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~ 195 (250)
T cd05123 162 PEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYA 195 (250)
T ss_pred hHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 7777677788899999999999999999999863
No 382
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.39 E-value=3e-07 Score=96.28 Aligned_cols=35 Identities=23% Similarity=0.287 Sum_probs=28.7
Q ss_pred cCCCCcccEecccCceeEEEEEeC-CCcEEEEEEec
Q 042662 524 TNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFD 558 (690)
Q Consensus 524 t~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~ 558 (690)
.++|...+.||+|+||.||+|... +|..||||++.
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~ 41 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIF 41 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeec
Confidence 345666688999999999999975 57899999874
No 383
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.38 E-value=6.5e-07 Score=93.61 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=30.3
Q ss_pred HhcccCCc-cc-ccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGR-VS-TNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~-~~-~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+.. ++ .++||||+||+|+-|++|+-|+++
T Consensus 190 PEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d 225 (370)
T KOG0583|consen 190 PEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD 225 (370)
T ss_pred HHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence 89887766 65 789999999999999999999985
No 384
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.37 E-value=4e-07 Score=94.82 Aligned_cols=49 Identities=29% Similarity=0.434 Sum_probs=35.7
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccccch---HHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRGA---FKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~~---~~~f~~e~~~~ 575 (690)
|.+-+.||.|+||.||-|... +..+||||++.-...++ ......||..+
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL 80 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFL 80 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHH
Confidence 444567999999999999853 57899999996554443 33456777666
No 385
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.37 E-value=1.1e-08 Score=108.62 Aligned_cols=181 Identities=31% Similarity=0.305 Sum_probs=112.6
Q ss_pred hhhhcCCCCCCEEeCcCCcCcccCCccccCC-CCCCEEEeeCCcCc---ccCcccccC------CCCCCeeeCCCCccCc
Q 042662 238 PIALGKLKKLQLLSLEDNQLEGSIPDNLCGL-AALFQLDLGGNKLC---GFIPACSGN------LTNLRKLYLGSNQLTS 307 (690)
Q Consensus 238 p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~n~l~---~~~~~~~~~------l~~L~~L~L~~n~l~~ 307 (690)
|-.+..+.+|++|.+.++.+... ..+..+ ..|+.|.- .|.+. ..+..+.+. ...|...+.+.|.+..
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~~ 178 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLIC-HNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLVL 178 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhh-hccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHHh
Confidence 45566778888888888877631 111111 12333321 22211 011111111 1356677778888888
Q ss_pred ccccccccCCCceeeccCCcccCCCCCCccCCcccceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCC
Q 042662 308 IPSTLWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDL 387 (690)
Q Consensus 308 ~p~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 387 (690)
+..++.-++.|+.|+|++|+++..- .+..++.|++|||++|.+....--...+|. |+.|+|++|.++.. ..+.++
T Consensus 179 mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~L 253 (1096)
T KOG1859|consen 179 MDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGIENL 253 (1096)
T ss_pred HHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhHHhh
Confidence 7777777888888888888887432 667788888888888888733222233444 88888888887633 346678
Q ss_pred CCCCEEECcCCcCcccC-ChhhhcCCCCCEEEcCCCcCcc
Q 042662 388 ISLKSLNLSNNNLSGTI-PISLEKLLDLKEINVSFNNLEG 426 (690)
Q Consensus 388 ~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~l~ls~n~l~~ 426 (690)
.+|+.||++.|-+.+.- -..+..+..|+.|.+.+|++-+
T Consensus 254 ksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 254 KSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred hhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 88888888888776531 1224456677778888887764
No 386
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.37 E-value=4.5e-07 Score=94.88 Aligned_cols=29 Identities=31% Similarity=0.441 Sum_probs=25.1
Q ss_pred cEecccCceeEEEEEeC-CCcEEEEEEecc
Q 042662 531 NLIGRGGFGSVYKARIH-DGMEAAVKVFDL 559 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~-~~~~vavk~~~~ 559 (690)
+.||.|+||.||+|... +|..||||++..
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~ 44 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKI 44 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeec
Confidence 66999999999999865 589999998754
No 387
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=98.34 E-value=3.9e-07 Score=89.99 Aligned_cols=53 Identities=23% Similarity=0.209 Sum_probs=36.8
Q ss_pred ccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccc--ccchHHHHHHHHHHH
Q 042662 523 ATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQ--YRGAFKSFDIECDMM 575 (690)
Q Consensus 523 at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~--~~~~~~~f~~e~~~~ 575 (690)
+...|...+.||+|+||.|.+++.. +|..||||++... .....++=.+|+..+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklL 75 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLL 75 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHH
Confidence 3334444577999999999999874 6899999998632 222344555677666
No 388
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.32 E-value=9e-09 Score=98.27 Aligned_cols=174 Identities=22% Similarity=0.173 Sum_probs=86.0
Q ss_pred CCEEECCCCcCccc-chhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCC-cCccc-CcccccCCCCCCeee
Q 042662 223 LIAIYLGRNKLNGS-IPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGN-KLCGF-IPACSGNLTNLRKLY 299 (690)
Q Consensus 223 L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~ 299 (690)
|+++||++..++.. .-..++.|.+|+.|.+.++++.+.+...++.-.+|+.|+|+.+ +++.. ..-.+.+++.|+.|+
T Consensus 187 lq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LN 266 (419)
T KOG2120|consen 187 LQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELN 266 (419)
T ss_pred hHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcC
Confidence 55555555555421 2223445556666666666665555555555556666666553 23221 111234556666666
Q ss_pred CCCCccCc--cccccc-ccCCCceeeccCCccc---CCCCCCccCCcccceeeccccc-cccccCccccCCCCCCeeecc
Q 042662 300 LGSNQLTS--IPSTLW-NLKDILHLNLSSNSFT---GPLPLKIGNFNVLIQLDLSMNN-FSGVIPTKIGGLKDLQYLFLE 372 (690)
Q Consensus 300 L~~n~l~~--~p~~~~-~~~~L~~L~L~~n~l~---~~~~~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L~ 372 (690)
|+.|.+.. +...+. --++|+.|+|+++.-. ..+..-...+++|.+||||+|. ++......|..++.|++|.++
T Consensus 267 lsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSls 346 (419)
T KOG2120|consen 267 LSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLS 346 (419)
T ss_pred chHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehh
Confidence 66665543 111111 1245666666655311 1111122345666666666653 222222344556677777776
Q ss_pred CccccccCCcc---cCCCCCCCEEECcCC
Q 042662 373 YNRLQGSIPNS---IGDLISLKSLNLSNN 398 (690)
Q Consensus 373 ~n~l~~~~~~~---l~~l~~L~~L~Ls~n 398 (690)
.|.. .+|.. +...|+|.+||+-++
T Consensus 347 RCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 347 RCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhcC--CChHHeeeeccCcceEEEEeccc
Confidence 6653 44443 344566666666554
No 389
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.32 E-value=5.5e-07 Score=93.38 Aligned_cols=47 Identities=23% Similarity=0.254 Sum_probs=38.4
Q ss_pred cccEecccCceeEEEEEeCCCcEEEEEEecc--cccchHHHHHHHHHHH
Q 042662 529 ENNLIGRGGFGSVYKARIHDGMEAAVKVFDL--QYRGAFKSFDIECDMM 575 (690)
Q Consensus 529 ~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~--~~~~~~~~f~~e~~~~ 575 (690)
....||+||...|||+.-.+.+.+|.|+... ...+....|..|++.+
T Consensus 365 ilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL 413 (677)
T KOG0596|consen 365 ILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALL 413 (677)
T ss_pred HHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHH
Confidence 3467999999999999998889999988743 3345677899999888
No 390
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.31 E-value=3.4e-07 Score=93.98 Aligned_cols=48 Identities=29% Similarity=0.538 Sum_probs=39.8
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEecccc--cchHHHHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY--RGAFKSFDIECDMM 575 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~--~~~~~~f~~e~~~~ 575 (690)
|. ++++|.|-||+||-|... .|+.||||+++..+ .+...+..+|+.++
T Consensus 567 f~-devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaIL 617 (888)
T KOG4236|consen 567 FA-DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAIL 617 (888)
T ss_pred hh-HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHH
Confidence 43 478999999999999985 59999999997765 34567789999988
No 391
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.31 E-value=9.8e-07 Score=91.99 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=27.9
Q ss_pred HhcccC--CcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGRE--GRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~--~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+ ..++.++|||||||+++||++|+.|+..
T Consensus 177 PE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~ 212 (328)
T cd08226 177 PELLRQDLYGYNVKSDIYSVGITACELATGRVPFQD 212 (328)
T ss_pred hhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 565544 3467899999999999999999999864
No 392
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.30 E-value=4.3e-07 Score=94.06 Aligned_cols=33 Identities=12% Similarity=0.358 Sum_probs=31.7
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||....+.++..+|+|+|||+|+.|+.|+.|+-
T Consensus 256 PElL~~~~~~~~sDiWAlGCilyQmlaG~PPFr 288 (604)
T KOG0592|consen 256 PELLNDSPAGPSSDLWALGCILYQMLAGQPPFR 288 (604)
T ss_pred HHHhcCCCCCcccchHHHHHHHHHHhcCCCCCc
Confidence 999999999999999999999999999999975
No 393
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.29 E-value=1e-06 Score=92.08 Aligned_cols=34 Identities=24% Similarity=0.212 Sum_probs=27.7
Q ss_pred HhcccC-CcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~-~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+ ..++.++|||||||+++|+++|+.|...
T Consensus 178 PE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~ 212 (332)
T cd07857 178 PEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKG 212 (332)
T ss_pred cHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCC
Confidence 665544 3578899999999999999999988753
No 394
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.28 E-value=8.6e-07 Score=85.76 Aligned_cols=55 Identities=27% Similarity=0.423 Sum_probs=44.2
Q ss_pred hhhHhhhccCCCCcccEecccCceeEEEEE-eCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 516 TYLELFQATNGFSENNLIGRGGFGSVYKAR-IHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 516 ~~~~l~~at~~f~~~~~ig~g~~g~vy~~~-l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
.|+|+-+.|. .++|+|+||+|--++ +..|...|||+++...........+|++++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f 129 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETF 129 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHH
Confidence 3567766665 779999999998766 457899999999888666677788899887
No 395
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.25 E-value=1.8e-07 Score=97.96 Aligned_cols=43 Identities=30% Similarity=0.587 Sum_probs=35.8
Q ss_pred ecccCceeEEEEEeCC-CcEEEEEEecccccchHHHHHHHHHHH
Q 042662 533 IGRGGFGSVYKARIHD-GMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 533 ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+|.|+||.||||+-.+ +...|.|+++.........|+.||+++
T Consensus 40 LGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeIL 83 (1187)
T KOG0579|consen 40 LGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEIL 83 (1187)
T ss_pred hcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhh
Confidence 7889999999998764 455678888887777788899999988
No 396
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=98.24 E-value=1e-06 Score=84.62 Aligned_cols=34 Identities=12% Similarity=0.231 Sum_probs=28.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||...+..+...+|.|+|||+++||+.|..|+..
T Consensus 210 PEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~ 243 (355)
T KOG0616|consen 210 PEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYD 243 (355)
T ss_pred hHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcC
Confidence 5556666777789999999999999999999753
No 397
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.23 E-value=3.3e-08 Score=94.52 Aligned_cols=176 Identities=20% Similarity=0.185 Sum_probs=125.4
Q ss_pred ccCcEEEeecCccccc-CcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCc-Cccc-CCccccCCCCCCE
Q 042662 197 QSMEDFQMHNCNISGS-IPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQ-LEGS-IPDNLCGLAALFQ 273 (690)
Q Consensus 197 ~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~-~~~~~~~l~~L~~ 273 (690)
..|++|||++..++.. .-..+..|.+|+.|.+.++++...+...+.+-.+|+.|+++.+. ++.. ..-.+.+++.|..
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 3688899998877643 23345788999999999999998888889999999999998874 2211 1224678899999
Q ss_pred EEeeCCcCcccCccc-c-cCCCCCCeeeCCCCccC----cccccccccCCCceeeccCCc-ccCCCCCCccCCcccceee
Q 042662 274 LDLGGNKLCGFIPAC-S-GNLTNLRKLYLGSNQLT----SIPSTLWNLKDILHLNLSSNS-FTGPLPLKIGNFNVLIQLD 346 (690)
Q Consensus 274 L~L~~n~l~~~~~~~-~-~~l~~L~~L~L~~n~l~----~~p~~~~~~~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~ 346 (690)
|+|++|.+....-.. + .--++|+.|+|+++.-. .+..-...+++|.+|||++|. ++...-..+..++.|++|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 999999876432111 1 11257888999886321 133334568899999999875 3333334566788999999
Q ss_pred ccccccccccCcc---ccCCCCCCeeeccCc
Q 042662 347 LSMNNFSGVIPTK---IGGLKDLQYLFLEYN 374 (690)
Q Consensus 347 Ls~n~l~~~~~~~---~~~l~~L~~L~L~~n 374 (690)
++.|.. .+|.. +...|+|.+|++-++
T Consensus 345 lsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 345 LSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 998864 45654 457789999998765
No 398
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.23 E-value=1.6e-06 Score=95.39 Aligned_cols=46 Identities=28% Similarity=0.450 Sum_probs=40.5
Q ss_pred ccEecccCceeEEEEEeCCC-cEEEEEEecccccchHHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIHDG-MEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~~~-~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+++|.+|||+.||.+....+ ..+|+||+-.....+.+...+||++|
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~M 88 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIM 88 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHH
Confidence 47899999999999998776 99999999777777788889999988
No 399
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.22 E-value=1.2e-06 Score=98.83 Aligned_cols=51 Identities=39% Similarity=0.617 Sum_probs=39.4
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc-cchHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY-RGAFKSFDIECDMM 575 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~-~~~~~~f~~e~~~~ 575 (690)
++|.+-.++|+||||.|||++-. ||+..|||++.... ....+...+|++.+
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~L 531 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLL 531 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHH
Confidence 45666688999999999999864 89999999986543 23345566788877
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.22 E-value=2.1e-06 Score=84.73 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=30.5
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+......+.++||||||++++|++||+.|++.
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~ 188 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPG 188 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 7777778889999999999999999999999764
No 401
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.22 E-value=5.4e-07 Score=99.29 Aligned_cols=31 Identities=13% Similarity=0.227 Sum_probs=28.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKP 606 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p 606 (690)
||+..+..++.++|||||||+++||++|+.+
T Consensus 337 PE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 337 PEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred chhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 8888888899999999999999999998754
No 402
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.22 E-value=3.6e-07 Score=92.41 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=31.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||....++++-..|.||+|++++||+.|+.|+-
T Consensus 355 PEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr 387 (591)
T KOG0986|consen 355 PEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFR 387 (591)
T ss_pred HHHHcCCcccCCccHHHHHhHHHHHHcccCchh
Confidence 999999999999999999999999999999974
No 403
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.21 E-value=1.9e-06 Score=89.24 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=28.1
Q ss_pred HhcccC--CcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGRE--GRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~--~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+... ..++.++|||||||+++|++||+.|+..
T Consensus 177 PE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~ 212 (314)
T cd08216 177 PEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKD 212 (314)
T ss_pred HHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 666543 3478899999999999999999999864
No 404
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.21 E-value=3.2e-08 Score=105.18 Aligned_cols=124 Identities=27% Similarity=0.373 Sum_probs=65.2
Q ss_pred cCcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccCCc-cccCCCCCCEEEe
Q 042662 198 SMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPD-NLCGLAALFQLDL 276 (690)
Q Consensus 198 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L 276 (690)
.|...+.+.|.++ .....+.-++.|+.|+|++|+++.. ..+..|+.|+.|||+.|.+. .+|. ...++. |..|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 3445555555554 3334444555566666666666532 24555666666666666655 2332 111222 666666
Q ss_pred eCCcCcccCcccccCCCCCCeeeCCCCccCccc--ccccccCCCceeeccCCcc
Q 042662 277 GGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIP--STLWNLKDILHLNLSSNSF 328 (690)
Q Consensus 277 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p--~~~~~~~~L~~L~L~~n~l 328 (690)
++|.++.. ..+.++.+|+.||+++|-+.+.. .-+|.+..|+.|+|.+|.+
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 66655533 12445566666666666555532 2345555666666666654
No 405
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=98.20 E-value=1.4e-06 Score=87.46 Aligned_cols=46 Identities=22% Similarity=0.384 Sum_probs=33.9
Q ss_pred ccEecccCceeEEEEEeC-CCcEEEEEEecccccc-----h--HHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRG-----A--FKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~-----~--~~~f~~e~~~~ 575 (690)
.+.+|+|+||.|-+|.-. +|+.||||.++..... . .....+|+++|
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieIL 230 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEIL 230 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHH
Confidence 467999999999999764 6999999999654311 1 12235899988
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.19 E-value=2.1e-06 Score=80.44 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=32.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..++.++.|+|||||||+++||+||+.|+..
T Consensus 73 PE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~ 106 (176)
T smart00750 73 PEVIQGQSYTEKADIYSLGITLYEALDYELPYNE 106 (176)
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccc
Confidence 9999999999999999999999999999999864
No 407
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.19 E-value=2.5e-06 Score=85.56 Aligned_cols=33 Identities=15% Similarity=0.265 Sum_probs=28.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+...+.++|||||||+++||+||+.|.+
T Consensus 174 pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~ 206 (260)
T cd08222 174 PEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE 206 (260)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 666666677889999999999999999999975
No 408
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=98.19 E-value=5.1e-06 Score=92.34 Aligned_cols=36 Identities=28% Similarity=0.457 Sum_probs=31.3
Q ss_pred ccCCCCcccEecccCceeEEEEEeCC-----CcEEEEEEec
Q 042662 523 ATNGFSENNLIGRGGFGSVYKARIHD-----GMEAAVKVFD 558 (690)
Q Consensus 523 at~~f~~~~~ig~g~~g~vy~~~l~~-----~~~vavk~~~ 558 (690)
..++|...+.||+|+||.||+|+..+ +..||||++.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~ 170 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKAT 170 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEec
Confidence 56788888999999999999999854 6899999864
No 409
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.19 E-value=8.4e-07 Score=94.14 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=28.7
Q ss_pred HhcccCC--cccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGREG--RVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~~--~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||.+..| -+-..+||||||+.+.||.|||.|+-..
T Consensus 745 PEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~El 781 (1226)
T KOG4279|consen 745 PEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVEL 781 (1226)
T ss_pred hHhhccCCcCCCchhhhhhccceeEeeccCCCCeeec
Confidence 8887544 3567899999999999999999997543
No 410
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.18 E-value=6.8e-07 Score=91.13 Aligned_cols=30 Identities=20% Similarity=0.381 Sum_probs=25.9
Q ss_pred Hhcc-cCCcccccceEEehhHHHHHHhcCCC
Q 042662 576 KQYG-REGRVSTNGDVYSFGIMLMETFTRKK 605 (690)
Q Consensus 576 pe~~-~~~~~~~k~DvysfGv~llel~tg~~ 605 (690)
||+. ..+-+|.+.|+|+||+|+.|+.+=|.
T Consensus 178 PEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrP 208 (538)
T KOG0661|consen 178 PEVLLRSGYYSSPVDMWAVGCIMAELYSLRP 208 (538)
T ss_pred hHHhhhccccCCchHHHHHHHHHHHHHHhcc
Confidence 7765 56888999999999999999998663
No 411
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.16 E-value=7.6e-07 Score=88.86 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=31.9
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||......+....|.|||||+|+||+.|+.|+|..
T Consensus 519 PEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 519 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred cceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 88888888899999999999999999999999853
No 412
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.16 E-value=3.7e-07 Score=87.48 Aligned_cols=189 Identities=21% Similarity=0.206 Sum_probs=102.5
Q ss_pred CCCCCeEecccCcccc--cCCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccCCcCCCCCChhhhhc
Q 042662 118 ASKLFTLGLEENSFSG--FIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNPLGGILPRAIGNL 195 (690)
Q Consensus 118 l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~ 195 (690)
.+.++.+||.+|.++. .+...+.+++.|++|+++.|.+...+...| ....+|+.|-|.+..+...-..++..-
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp-----~p~~nl~~lVLNgT~L~w~~~~s~l~~ 144 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLP-----LPLKNLRVLVLNGTGLSWTQSTSSLDD 144 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCc-----ccccceEEEEEcCCCCChhhhhhhhhc
Confidence 4566777777777653 122335567777777777777766553222 134566666666665544333332222
Q ss_pred cccCcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchh--hhcCCCCCCEEeCcCCcCcccCCccccCCCCCCE
Q 042662 196 SQSMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPI--ALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQ 273 (690)
Q Consensus 196 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 273 (690)
.+.+++|+++.|++. .++++.|.+...-|. .+...+.+..++++-|++... ++++..
T Consensus 145 lP~vtelHmS~N~~r--------------q~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~-------Fpnv~s 203 (418)
T KOG2982|consen 145 LPKVTELHMSDNSLR--------------QLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI-------FPNVNS 203 (418)
T ss_pred chhhhhhhhccchhh--------------hhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh-------cccchh
Confidence 225555555555332 222333332211111 112222333333344444432 346667
Q ss_pred EEeeCCcCcccC-cccccCCCCCCeeeCCCCccCccc--ccccccCCCceeeccCCcccCCC
Q 042662 274 LDLGGNKLCGFI-PACSGNLTNLRKLYLGSNQLTSIP--STLWNLKDILHLNLSSNSFTGPL 332 (690)
Q Consensus 274 L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~p--~~~~~~~~L~~L~L~~n~l~~~~ 332 (690)
+.+..|.+.... ...+..+|.+..|+|+.|++.++. ..+..++.|..|.+++|.+...+
T Consensus 204 v~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l 265 (418)
T KOG2982|consen 204 VFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPL 265 (418)
T ss_pred eeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccc
Confidence 777777665432 234456677888888888888854 35667788888888888776543
No 413
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.12 E-value=2.4e-06 Score=84.64 Aligned_cols=31 Identities=29% Similarity=0.393 Sum_probs=27.1
Q ss_pred HhcccCC-cccccceEEehhHHHHHHhcCCCC
Q 042662 576 KQYGREG-RVSTNGDVYSFGIMLMETFTRKKP 606 (690)
Q Consensus 576 pe~~~~~-~~~~k~DvysfGv~llel~tg~~p 606 (690)
||...+. .+++..|+||+|+++.||++++.-
T Consensus 189 PEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 189 PEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred HHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence 8988776 789999999999999999996643
No 414
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.11 E-value=4.5e-06 Score=87.34 Aligned_cols=46 Identities=30% Similarity=0.432 Sum_probs=37.2
Q ss_pred ccEecccCceeEEEEEeCC-CcEEEEEEecccccc---hHHHHHHHHHHH
Q 042662 530 NNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYRG---AFKSFDIECDMM 575 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~~---~~~~f~~e~~~~ 575 (690)
.+.+|+|.||.||+++-.. |..+|+|.+...... ......+|+++|
T Consensus 40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il 89 (382)
T KOG0032|consen 40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAIL 89 (382)
T ss_pred hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHH
Confidence 3679999999999999875 999999999665433 235788898888
No 415
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.10 E-value=1.4e-07 Score=79.97 Aligned_cols=104 Identities=26% Similarity=0.302 Sum_probs=55.4
Q ss_pred CCEEECCCCcCcccchhh---hcCCCCCCEEeCcCCcCcccCCcccc-CCCCCCEEEeeCCcCcccCcccccCCCCCCee
Q 042662 223 LIAIYLGRNKLNGSIPIA---LGKLKKLQLLSLEDNQLEGSIPDNLC-GLAALFQLDLGGNKLCGFIPACSGNLTNLRKL 298 (690)
Q Consensus 223 L~~L~l~~n~l~~~~p~~---l~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 298 (690)
+..++|+.|.+- .++.. +.....|+..+|++|.+. .+|..|. .++.++.|+|++|.++ .+|..+..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 445666666554 23333 233344555566666665 3333333 2345566666666665 334446666666666
Q ss_pred eCCCCccCcccccccccCCCceeeccCCccc
Q 042662 299 YLGSNQLTSIPSTLWNLKDILHLNLSSNSFT 329 (690)
Q Consensus 299 ~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~ 329 (690)
+++.|.+...|..+..+.++..|+..+|.+.
T Consensus 106 Nl~~N~l~~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLNAEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccccCccccchHHHHHHHhHHHhcCCCCccc
Confidence 6666666665555555555555555555543
No 416
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.10 E-value=3.8e-07 Score=86.25 Aligned_cols=255 Identities=20% Similarity=0.169 Sum_probs=115.6
Q ss_pred CCCCCCEEECcCCcccccCC----cccCCCCCCCeeecccCc---CcccCCccccCCCCCCEEecCCCCCCCCCEEeccC
Q 042662 32 NLSSLSSLDLSDNSLTGEIP----YEIGNLHNLEWMAFSFNK---LVGVVPTAIFNVSTLKSLYLHNVRLPNLEELLLWG 104 (690)
Q Consensus 32 ~l~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~L~~n~---l~~~~p~~l~~l~~L~~L~l~~~~l~~L~~L~L~~ 104 (690)
.+..+..++||+|.|...-. ..+.+-.+|+..+++.-. ....+|+.+.- |-=.--.||+|+..+|+.
T Consensus 28 ~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~------Ll~aLlkcp~l~~v~LSD 101 (388)
T COG5238 28 MMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVM------LLKALLKCPRLQKVDLSD 101 (388)
T ss_pred hhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHH------HHHHHhcCCcceeeeccc
Confidence 46677777788777643222 234455666666655421 11112221110 000000345566666666
Q ss_pred CccCccCCccc----cCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEcc
Q 042662 105 NNFSGTIPSFI----FNASKLFTLGLEENSFSGFIPNTFGSLRNLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFY 180 (690)
Q Consensus 105 n~l~~~~p~~l----~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~ 180 (690)
|.+....|..+ ...+.|.+|.+++|.+.-.--.-+++ .|. ++.+.....+-|.|+.....
T Consensus 102 NAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigk--al~--------------~la~nKKaa~kp~Le~vicg 165 (388)
T COG5238 102 NAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGK--ALF--------------HLAYNKKAADKPKLEVVICG 165 (388)
T ss_pred cccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHH--HHH--------------HHHHHhhhccCCCceEEEec
Confidence 66655544433 34456667777666653110000110 000 00000122233444444444
Q ss_pred CCcCCCCCC---hhhhhccccCcEEEeecCccccc-----CcccccCCCCCCEEECCCCcCccc----chhhhcCCCCCC
Q 042662 181 NNPLGGILP---RAIGNLSQSMEDFQMHNCNISGS-----IPEEISNLTNLIAIYLGRNKLNGS----IPIALGKLKKLQ 248 (690)
Q Consensus 181 ~n~l~~~~p---~~~~~~~~~L~~L~L~~n~l~~~-----~p~~l~~l~~L~~L~l~~n~l~~~----~p~~l~~l~~L~ 248 (690)
.|++..-.. .........|+++.+..|.+.-. +...+..+.+|+.||+.+|.++.. +...+...+.|+
T Consensus 166 rNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lr 245 (388)
T COG5238 166 RNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLR 245 (388)
T ss_pred cchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhh
Confidence 444321110 11111112455555555554321 111233456666666666666532 222334445566
Q ss_pred EEeCcCCcCcccCCcc----cc--CCCCCCEEEeeCCcCcccC-cc------cccCCCCCCeeeCCCCccCcc
Q 042662 249 LLSLEDNQLEGSIPDN----LC--GLAALFQLDLGGNKLCGFI-PA------CSGNLTNLRKLYLGSNQLTSI 308 (690)
Q Consensus 249 ~L~L~~n~l~~~~~~~----~~--~l~~L~~L~L~~n~l~~~~-~~------~~~~l~~L~~L~L~~n~l~~~ 308 (690)
.|.+.+|-++..-..+ |. ..++|..|...+|.+.+.+ -. .-..+|-|..|.+.+|++...
T Consensus 246 EL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E~ 318 (388)
T COG5238 246 ELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKEL 318 (388)
T ss_pred hccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchhH
Confidence 6666666554322211 11 2456666666666554321 11 113567788888888888764
No 417
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.08 E-value=7.6e-07 Score=101.11 Aligned_cols=39 Identities=36% Similarity=0.487 Sum_probs=31.2
Q ss_pred hhccCCCCcccEecccCceeEEEEEe-CCCcEEEEEEecc
Q 042662 521 FQATNGFSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDL 559 (690)
Q Consensus 521 ~~at~~f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~ 559 (690)
...|-.|...+.||.|-||.||-|.- ++|...|||-+..
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~i 1270 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKI 1270 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhc
Confidence 34555677889999999999999885 4588899997643
No 418
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.06 E-value=2.8e-07 Score=78.12 Aligned_cols=89 Identities=25% Similarity=0.229 Sum_probs=39.2
Q ss_pred CCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeee
Q 042662 220 LTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLY 299 (690)
Q Consensus 220 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 299 (690)
...|+..++++|.+....+..-...+.++.|++++|.++ .+|..+..++.|+.|+++.|.+.. .|..+..+.++-.|+
T Consensus 52 ~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~~-~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 52 GYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLNA-EPRVIAPLIKLDMLD 129 (177)
T ss_pred CceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCcccc-chHHHHHHHhHHHhc
Confidence 334444455555544222222223334455555555554 344445555555555555555442 222333344444455
Q ss_pred CCCCccCcccc
Q 042662 300 LGSNQLTSIPS 310 (690)
Q Consensus 300 L~~n~l~~~p~ 310 (690)
..+|.+..+|-
T Consensus 130 s~~na~~eid~ 140 (177)
T KOG4579|consen 130 SPENARAEIDV 140 (177)
T ss_pred CCCCccccCcH
Confidence 44444444443
No 419
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.05 E-value=1.7e-06 Score=83.06 Aligned_cols=187 Identities=26% Similarity=0.274 Sum_probs=93.5
Q ss_pred CCCCCEEECCCCcCcc--cchhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCccc-CcccccCCCCCC
Q 042662 220 LTNLIAIYLGRNKLNG--SIPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGF-IPACSGNLTNLR 296 (690)
Q Consensus 220 l~~L~~L~l~~n~l~~--~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~ 296 (690)
++.++.+||.+|.++. .+...+.+++.|+.|+++.|.+...+...-....+|++|.|.+..+.-. ....+..+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 4556666666666653 2333445666666666666666533322112345566666655554321 222334555566
Q ss_pred eeeCCCCccCcccccccccCCCceeeccCCcccCCCC--CCccCCcccceeeccccccccccCccccCCCCCCeeeccCc
Q 042662 297 KLYLGSNQLTSIPSTLWNLKDILHLNLSSNSFTGPLP--LKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYN 374 (690)
Q Consensus 297 ~L~L~~n~l~~~p~~~~~~~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 374 (690)
.|+++.|++.. +++..+.+...-| ..+...+++..+.++-|++... ++++..+.+..|
T Consensus 150 elHmS~N~~rq-------------~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~-------Fpnv~sv~v~e~ 209 (418)
T KOG2982|consen 150 ELHMSDNSLRQ-------------LNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRI-------FPNVNSVFVCEG 209 (418)
T ss_pred hhhhccchhhh-------------hccccccccccchhhhhhhcCCcHHHHHHHHHhHHhh-------cccchheeeecC
Confidence 66666554332 1111111111000 0111223333334444444322 355666667777
Q ss_pred cccccC-CcccCCCCCCCEEECcCCcCccc-CChhhhcCCCCCEEEcCCCcCcc
Q 042662 375 RLQGSI-PNSIGDLISLKSLNLSNNNLSGT-IPISLEKLLDLKEINVSFNNLEG 426 (690)
Q Consensus 375 ~l~~~~-~~~l~~l~~L~~L~Ls~n~l~~~-~p~~l~~l~~L~~l~ls~n~l~~ 426 (690)
.+.... ......++.+..|+|+.|++..- --+.+..++.|..+.+++|++..
T Consensus 210 PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 210 PLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred cccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 664322 23444556666777777776532 12356677778888888777653
No 420
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.01 E-value=4.1e-06 Score=86.05 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=29.8
Q ss_pred HhcccCCccc-ccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGREGRVS-TNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~~~~~-~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||...+..++ ...||||+||+|+-|++|+.|+...
T Consensus 187 PEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA 222 (864)
T KOG4717|consen 187 PEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA 222 (864)
T ss_pred chhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc
Confidence 8888777774 5789999999999999999998643
No 421
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.00 E-value=6.4e-06 Score=87.56 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=30.3
Q ss_pred HhcccCCccc-ccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVS-TNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~-~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||..++..+. -++||||-||+|.-|+||+-|+|+
T Consensus 180 PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD 214 (786)
T KOG0588|consen 180 PEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD 214 (786)
T ss_pred chhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC
Confidence 8888887774 489999999999999999999984
No 422
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.00 E-value=4e-07 Score=86.07 Aligned_cols=43 Identities=21% Similarity=0.299 Sum_probs=26.2
Q ss_pred cccCCCCCCEEECCCCcCcccchhh----hcCCCCCCEEeCcCCcCc
Q 042662 216 EISNLTNLIAIYLGRNKLNGSIPIA----LGKLKKLQLLSLEDNQLE 258 (690)
Q Consensus 216 ~l~~l~~L~~L~l~~n~l~~~~p~~----l~~l~~L~~L~L~~n~l~ 258 (690)
.+-.||.|+.++|++|.+....|.. +++-+.|.+|.+++|.+.
T Consensus 87 aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlG 133 (388)
T COG5238 87 ALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLG 133 (388)
T ss_pred HHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCC
Confidence 3456677777777777766554443 344566666777666553
No 423
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.97 E-value=5.3e-06 Score=78.51 Aligned_cols=47 Identities=26% Similarity=0.376 Sum_probs=33.9
Q ss_pred cccEecccCceeEEEEEeC-CCcEEEEEEeccccc--chHHHHHHHHHHH
Q 042662 529 ENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR--GAFKSFDIECDMM 575 (690)
Q Consensus 529 ~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~--~~~~~f~~e~~~~ 575 (690)
+++-||-|+||.||..+.+ +|+.||.|++-.... .+.+.|.+|++++
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmL 106 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKML 106 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHH
Confidence 5578999999999999886 689999998844321 2334555666555
No 424
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=97.97 E-value=1.3e-06 Score=86.71 Aligned_cols=33 Identities=24% Similarity=0.198 Sum_probs=30.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||...+--.+..+||||+|++|.|+.||..-+.
T Consensus 278 PEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 278 PEVILGLGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred chheeccCcCCccCceeeeeEEEEeeccceecc
Confidence 999999899999999999999999999987543
No 425
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=97.93 E-value=1.5e-05 Score=80.17 Aligned_cols=34 Identities=24% Similarity=0.315 Sum_probs=30.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||.+.+.--+...|.|+|||+++||+-|+.|+..
T Consensus 304 PEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG 337 (459)
T KOG0610|consen 304 PEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKG 337 (459)
T ss_pred ceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCC
Confidence 7777777778889999999999999999999864
No 426
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.90 E-value=5.5e-05 Score=78.25 Aligned_cols=56 Identities=14% Similarity=0.252 Sum_probs=26.4
Q ss_pred cCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCC
Q 042662 218 SNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGN 279 (690)
Q Consensus 218 ~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 279 (690)
..+.+++.|++++|.++ .+|. -..+|+.|.+++|.-...+|..+ .++|+.|++++|
T Consensus 49 ~~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 49 EEARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC 104 (426)
T ss_pred HHhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCc
Confidence 34566666666666555 2331 11246666665543322333322 134555555544
No 427
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=97.90 E-value=4.3e-06 Score=84.29 Aligned_cols=34 Identities=24% Similarity=0.439 Sum_probs=29.9
Q ss_pred HhcccCC----cccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREG----RVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~----~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..-+ +++.|.||||.||+.+.-+-||+|+..
T Consensus 649 PEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGh 686 (775)
T KOG1151|consen 649 PECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGH 686 (775)
T ss_pred cceeecCCCCCccccceeeEeeehhhhhhhccCCCCCC
Confidence 8887554 789999999999999999999999853
No 428
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=97.87 E-value=1.4e-05 Score=78.91 Aligned_cols=33 Identities=24% Similarity=0.352 Sum_probs=29.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..++..+.++||||+||+++|++||+.|.+
T Consensus 151 PE~~~~~~~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 151 PEVGGISEETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred CcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence 777777788999999999999999999998754
No 429
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=97.83 E-value=2e-05 Score=78.72 Aligned_cols=45 Identities=24% Similarity=0.354 Sum_probs=35.1
Q ss_pred cEecccCceeEEEEEe-CCCcEEEEEEeccccc---chHHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARI-HDGMEAAVKVFDLQYR---GAFKSFDIECDMM 575 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~~---~~~~~f~~e~~~~ 575 (690)
+.+|+|.||.|-+|.- ..|+.||||.+..+.- +..-...+||++|
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIM 107 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIM 107 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHH
Confidence 4589999999999986 4699999998865543 3344567899888
No 430
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=97.78 E-value=1e-05 Score=90.92 Aligned_cols=59 Identities=31% Similarity=0.361 Sum_probs=41.3
Q ss_pred hhHhhhccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccc---cchHHHHHHHHHHH
Q 042662 517 YLELFQATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQY---RGAFKSFDIECDMM 575 (690)
Q Consensus 517 ~~~l~~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~---~~~~~~f~~e~~~~ 575 (690)
..+++--.++|.-..+||+|+||.|...+.. .+.+.|.|++.... .....-|..|=.+|
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDim 129 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIM 129 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHH
Confidence 3455555567777789999999999988875 47889999886522 22344566665555
No 431
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.76 E-value=3.6e-05 Score=81.51 Aligned_cols=53 Identities=28% Similarity=0.375 Sum_probs=41.5
Q ss_pred ccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEecccccc--hHHHHHHHHHHH
Q 042662 523 ATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYRG--AFKSFDIECDMM 575 (690)
Q Consensus 523 at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~~--~~~~f~~e~~~~ 575 (690)
-+.+|.-...||+|.|++|..|+.. .|..||||.++..... ..+.+.+|+++|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~im 109 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIM 109 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHH
Confidence 4456667788999999999999875 5899999998766532 345688999888
No 432
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.73 E-value=1.3e-05 Score=85.09 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=32.3
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||......+|+.+|+||+||+|+||+||+.|+...
T Consensus 482 PEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~ 516 (612)
T KOG0603|consen 482 PEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAH 516 (612)
T ss_pred hhhhccCCCCcchhhHHHHHHHHHHHhCCCccccC
Confidence 99988899999999999999999999999997643
No 433
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.70 E-value=2.6e-05 Score=53.62 Aligned_cols=36 Identities=39% Similarity=0.677 Sum_probs=17.1
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCCEEECcCCccc
Q 042662 11 ELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLT 47 (690)
Q Consensus 11 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 47 (690)
+|++|++++|+++ .+|..+++|++|++|++++|.++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555555555555 23334555555555555555544
No 434
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.70 E-value=3.7e-05 Score=79.78 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=31.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||...+..+..|+|+||+|+++.||.+=|.+++.
T Consensus 175 PEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a 208 (426)
T KOG0589|consen 175 PEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA 208 (426)
T ss_pred HHHhCCCCCCccCcchhhcchHHHHHhcccccCc
Confidence 8999999999999999999999999999998763
No 435
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.69 E-value=2.6e-05 Score=53.67 Aligned_cols=37 Identities=43% Similarity=0.647 Sum_probs=28.5
Q ss_pred CCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCc
Q 042662 34 SSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLV 71 (690)
Q Consensus 34 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 71 (690)
++|++|++++|+++ .+|..+++|++|++|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 47888888888888 56667888888888888888877
No 436
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=97.68 E-value=2.9e-05 Score=78.46 Aligned_cols=53 Identities=28% Similarity=0.257 Sum_probs=38.4
Q ss_pred hhccCCCCcccEecccCceeEEEEEeCC----CcEEEEEEecccccchHHHHHHHHHHH
Q 042662 521 FQATNGFSENNLIGRGGFGSVYKARIHD----GMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 521 ~~at~~f~~~~~ig~g~~g~vy~~~l~~----~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
...-+.|...++||+|.|++||++++.. ...||+|.+...+. .....+|++.+
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L 88 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEML 88 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHH
Confidence 3444557788999999999999999743 57899998865432 33355666655
No 437
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.67 E-value=3.2e-05 Score=75.18 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=28.5
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+.....+....|.|..||||+||++||-|+..
T Consensus 337 PEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn 370 (516)
T KOG0690|consen 337 PEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN 370 (516)
T ss_pred chhhccccccceeehhhhhHHHHHHHhccCcccc
Confidence 4445566777889999999999999999999763
No 438
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.65 E-value=3.5e-05 Score=75.07 Aligned_cols=50 Identities=16% Similarity=0.308 Sum_probs=39.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCccC--CCcccHHHHHHhhC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEVF--SGEMTLKRWVNDFL 625 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~~--~~~~~l~~~~~~~~ 625 (690)
||...+..+--..|.|++||+|.||+.||.|+|-.. ..+++-.++.-+.+
T Consensus 420 peilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi 471 (593)
T KOG0695|consen 420 PEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI 471 (593)
T ss_pred hhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH
Confidence 888888889999999999999999999999998432 23455555554443
No 439
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.64 E-value=0.00016 Score=74.81 Aligned_cols=52 Identities=17% Similarity=0.289 Sum_probs=26.1
Q ss_pred cCcEEEeecCcccccCcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCC
Q 042662 198 SMEDFQMHNCNISGSIPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDN 255 (690)
Q Consensus 198 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n 255 (690)
+++.|++++|.++ .+|. -..+|+.|.++++.--..+|..+. .+|+.|++++|
T Consensus 53 ~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~C 104 (426)
T PRK15386 53 ASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHC 104 (426)
T ss_pred CCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchhh--hhhhheEccCc
Confidence 5666666666555 2331 123466666655332223444332 35666666665
No 440
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.63 E-value=2.7e-05 Score=72.15 Aligned_cols=47 Identities=17% Similarity=0.367 Sum_probs=35.4
Q ss_pred CCCcccEecccCceeEEEEE-eCCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKAR-IHDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~-l~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
+|.-.+.+|+|.|..|+.|. +.+...++||.++... .+...+|+.++
T Consensus 39 dYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL 86 (338)
T KOG0668|consen 39 DYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKIL 86 (338)
T ss_pred hHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHH
Confidence 34445779999999999998 3467889999997754 34566788777
No 441
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.62 E-value=9e-05 Score=65.95 Aligned_cols=47 Identities=30% Similarity=0.320 Sum_probs=31.7
Q ss_pred CcccEecccCceeEEEEEeC-CCcEEEEEEeccc--ccchHHHHHHHHHH
Q 042662 528 SENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQ--YRGAFKSFDIECDM 574 (690)
Q Consensus 528 ~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~--~~~~~~~f~~e~~~ 574 (690)
+.-+.||+|.||+||||+-. .+..||.|+...+ ..+-..+-.+|+-+
T Consensus 5 dkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicl 54 (292)
T KOG0662|consen 5 DKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICL 54 (292)
T ss_pred HHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHH
Confidence 34467999999999999865 4789999987433 23333344445433
No 442
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.61 E-value=1.2e-05 Score=90.23 Aligned_cols=128 Identities=21% Similarity=0.206 Sum_probs=66.4
Q ss_pred CCCCeeecccCcC-cccCCcccc-CCCCCCEEecCCC------------CCCCCCEEeccCCccCccCCccccCCCCCCe
Q 042662 58 HNLEWMAFSFNKL-VGVVPTAIF-NVSTLKSLYLHNV------------RLPNLEELLLWGNNFSGTIPSFIFNASKLFT 123 (690)
Q Consensus 58 ~~L~~L~L~~n~l-~~~~p~~l~-~l~~L~~L~l~~~------------~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 123 (690)
.+|++|++++... ....|..++ .+|+|++|.+.+- ++|+|..||+++.+++.. .+++++++|++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 4677888877543 333444554 3577777776663 456666666666666532 44566666666
Q ss_pred EecccCcccc-cCCccccCCCCCCEEEccCCcCCCcCC-CCCcccCCCCCCCCCEEEccCCcCCCC
Q 042662 124 LGLEENSFSG-FIPNTFGSLRNLEWLSLNDNYLTSSTP-KLSFLSSLSNCKYLEYFGFYNNPLGGI 187 (690)
Q Consensus 124 L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~l~~l~~l~~L~~L~l~~n~l~~~ 187 (690)
|.+.+=.+.. ..-..+.+|++|+.||+|......... ...+++.-..+|.|+.||.+++.+.+.
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHH
Confidence 6655544432 111234456666666666554332210 001122223355555555555554443
No 443
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.60 E-value=8.6e-05 Score=67.76 Aligned_cols=82 Identities=28% Similarity=0.357 Sum_probs=48.7
Q ss_pred CCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccc--cccccCCCceeec
Q 042662 246 KLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPS--TLWNLKDILHLNL 323 (690)
Q Consensus 246 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~--~~~~~~~L~~L~L 323 (690)
+...+||++|.+... ..|..+++|.+|.|++|+|+.+-|..-.-+++|+.|.|.+|++..+.+ .+..+++|++|.+
T Consensus 43 ~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 455666666665422 235556667777777777766655544455667777777776666432 3445556666666
Q ss_pred cCCccc
Q 042662 324 SSNSFT 329 (690)
Q Consensus 324 ~~n~l~ 329 (690)
-+|..+
T Consensus 121 l~Npv~ 126 (233)
T KOG1644|consen 121 LGNPVE 126 (233)
T ss_pred cCCchh
Confidence 665544
No 444
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.53 E-value=0.00017 Score=74.14 Aligned_cols=54 Identities=24% Similarity=0.296 Sum_probs=39.1
Q ss_pred hccCCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc--------------chHHHHHHHHHHH
Q 042662 522 QATNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR--------------GAFKSFDIECDMM 575 (690)
Q Consensus 522 ~at~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~--------------~~~~~f~~e~~~~ 575 (690)
+..|.|.-...||+|.||.|-+|.-. +++.||||++..... ...+...+||.+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIail 162 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAIL 162 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHH
Confidence 34455666677999999999998854 689999999853211 1134678899888
No 445
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=97.46 E-value=5.1e-05 Score=73.59 Aligned_cols=29 Identities=17% Similarity=0.230 Sum_probs=25.0
Q ss_pred HhcccCC-cccccceEEehhHHHHHHhcCC
Q 042662 576 KQYGREG-RVSTNGDVYSFGIMLMETFTRK 604 (690)
Q Consensus 576 pe~~~~~-~~~~k~DvysfGv~llel~tg~ 604 (690)
||...+. .+|...|||+.||+..||+|-+
T Consensus 208 PELLLGa~hYT~AiDvWAiGCIfaElLtl~ 237 (438)
T KOG0666|consen 208 PELLLGARHYTKAIDVWAIGCIFAELLTLE 237 (438)
T ss_pred hHHhcccccccchhhhHHHHHHHHHHHccC
Confidence 8987764 5788899999999999999965
No 446
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.41 E-value=0.00024 Score=64.94 Aligned_cols=95 Identities=25% Similarity=0.329 Sum_probs=54.1
Q ss_pred CCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCCCEEecCCC------------CCCCCCEEec
Q 042662 35 SLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTLKSLYLHNV------------RLPNLEELLL 102 (690)
Q Consensus 35 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~~------------~l~~L~~L~L 102 (690)
+...+||++|.+... ..|..+++|.+|.|+.|+|+.+-|.--.-+++|+.|.+.+| .+|+|+.|.+
T Consensus 43 ~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 455566666655311 23445555666666666665444433334455666666655 4566777777
Q ss_pred cCCccCcc---CCccccCCCCCCeEecccCcc
Q 042662 103 WGNNFSGT---IPSFIFNASKLFTLGLEENSF 131 (690)
Q Consensus 103 ~~n~l~~~---~p~~l~~l~~L~~L~L~~n~l 131 (690)
-+|..+.. =---+..+++|+.||+..-.-
T Consensus 121 l~Npv~~k~~YR~yvl~klp~l~~LDF~kVt~ 152 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLYVLYKLPSLRTLDFQKVTR 152 (233)
T ss_pred cCCchhcccCceeEEEEecCcceEeehhhhhH
Confidence 77766521 112256788999999876444
No 447
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.38 E-value=8.6e-06 Score=76.10 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=31.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||......++.-+|||+-||+|.-|+.|+.|+.+
T Consensus 181 PEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~ 214 (355)
T KOG0033|consen 181 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 214 (355)
T ss_pred HHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC
Confidence 8988889999999999999999999999999864
No 448
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=97.34 E-value=0.00011 Score=76.06 Aligned_cols=32 Identities=22% Similarity=0.054 Sum_probs=29.8
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPT 607 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~ 607 (690)
||.+.+-.++.--|+||-||.|+||-||+--+
T Consensus 604 PEIiLG~~yd~~iD~WSvgctLYElYtGkIlF 635 (752)
T KOG0670|consen 604 PEIILGLPYDYPIDTWSVGCTLYELYTGKILF 635 (752)
T ss_pred cceeecCcccCCccceeeceeeEEeeccceec
Confidence 99999999999999999999999999998643
No 449
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.34 E-value=2.6e-05 Score=85.13 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=31.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcC-CCCCCcc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTR-KKPTDEV 610 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg-~~p~~~~ 610 (690)
||.....+-+...|+||+|+|++..+|| +.|+.+.
T Consensus 683 PE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~ 718 (903)
T KOG1027|consen 683 PEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS 718 (903)
T ss_pred HHHHhccccCcccchhhcCceEEEEecCCccCCCch
Confidence 9999888889999999999999999997 7887643
No 450
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=97.24 E-value=0.00036 Score=77.00 Aligned_cols=59 Identities=29% Similarity=0.464 Sum_probs=42.5
Q ss_pred hhhHhhhccCCCCcccEecccCceeEEEEEe-CCCcEEEEEEecccccchHHHHHHHHHHH
Q 042662 516 TYLELFQATNGFSENNLIGRGGFGSVYKARI-HDGMEAAVKVFDLQYRGAFKSFDIECDMM 575 (690)
Q Consensus 516 ~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l-~~~~~vavk~~~~~~~~~~~~f~~e~~~~ 575 (690)
.++.+..-|+-|.-..+||.|.+|.|||++- .+|+.+|||+++..... ..+-..|.+++
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil 69 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNML 69 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHH
Confidence 4455556666777778999999999999985 46889999988765543 34455555555
No 451
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=97.22 E-value=0.00015 Score=76.73 Aligned_cols=45 Identities=20% Similarity=0.291 Sum_probs=36.2
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCccCCCc--ccHHHH
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEVFSGE--MTLKRW 620 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~~~~~--~~l~~~ 620 (690)
||+....-++.-||.||-||+|.||+-|+.|+-.....+ ..+..|
T Consensus 840 pevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw 886 (1034)
T KOG0608|consen 840 PEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINW 886 (1034)
T ss_pred hHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeeh
Confidence 888888889999999999999999999999986544332 334555
No 452
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=97.14 E-value=0.00083 Score=64.21 Aligned_cols=43 Identities=30% Similarity=0.595 Sum_probs=33.2
Q ss_pred ecccCceeEEEEEeCC-CcEEEEEEecccccc-hHHHHHHHHHHH
Q 042662 533 IGRGGFGSVYKARIHD-GMEAAVKVFDLQYRG-AFKSFDIECDMM 575 (690)
Q Consensus 533 ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~~-~~~~f~~e~~~~ 575 (690)
||+|++|.||++...+ |..++||++...... ..+.|.+|++.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~ 45 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEIL 45 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHH
Confidence 6899999999999865 889999998765432 345677777665
No 453
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.13 E-value=0.00025 Score=79.78 Aligned_cols=118 Identities=20% Similarity=0.307 Sum_probs=64.1
Q ss_pred CChhhhhccccCcEEEeecCccccc-CcccccCCCCCCEEECCCCcCcccchhhhcCCCCCCEEeCcCCcCcc-cCCccc
Q 042662 188 LPRAIGNLSQSMEDFQMHNCNISGS-IPEEISNLTNLIAIYLGRNKLNGSIPIALGKLKKLQLLSLEDNQLEG-SIPDNL 265 (690)
Q Consensus 188 ~p~~~~~~~~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~~~~~ 265 (690)
.|..++...++|+.|.+.+-.+... +.....++++|..||+++.+++.. .+++++++|+.|.+.+-.+.. ..-..+
T Consensus 139 W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~L 216 (699)
T KOG3665|consen 139 WPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDL 216 (699)
T ss_pred HHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHH
Confidence 3445555545666666666554322 223345667777777777766633 556677777777766655442 111234
Q ss_pred cCCCCCCEEEeeCCcCcccC------cccccCCCCCCeeeCCCCccCc
Q 042662 266 CGLAALFQLDLGGNKLCGFI------PACSGNLTNLRKLYLGSNQLTS 307 (690)
Q Consensus 266 ~~l~~L~~L~L~~n~l~~~~------~~~~~~l~~L~~L~L~~n~l~~ 307 (690)
.++++|+.||+|........ -++-..+|+|+.||.|+..+..
T Consensus 217 F~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 217 FNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINE 264 (699)
T ss_pred hcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhH
Confidence 55677777777665433211 1122335666666666555544
No 454
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=96.94 E-value=0.00053 Score=71.00 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=25.1
Q ss_pred hcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 577 QYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 577 e~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
|.....--+...|.||+||++.||+||+.|+.
T Consensus 589 EIILnKGHD~avDyWaLGIli~ELL~G~pPFs 620 (732)
T KOG0614|consen 589 EIILNKGHDRAVDYWALGILIYELLTGSPPFS 620 (732)
T ss_pred hhhhccCcchhhHHHHHHHHHHHHHcCCCCCC
Confidence 33333344667899999999999999999976
No 455
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=96.90 E-value=0.0022 Score=56.38 Aligned_cols=8 Identities=13% Similarity=0.293 Sum_probs=2.1
Q ss_pred CCCeeecc
Q 042662 365 DLQYLFLE 372 (690)
Q Consensus 365 ~L~~L~L~ 372 (690)
.|+.+.+.
T Consensus 104 ~l~~i~~~ 111 (129)
T PF13306_consen 104 NLKEINIP 111 (129)
T ss_dssp T--EEE-T
T ss_pred CceEEEEC
Confidence 44444443
No 456
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=96.88 E-value=0.0031 Score=55.35 Aligned_cols=104 Identities=15% Similarity=0.223 Sum_probs=39.5
Q ss_pred hhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccc-cccccCCC
Q 042662 240 ALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPS-TLWNLKDI 318 (690)
Q Consensus 240 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~-~~~~~~~L 318 (690)
.|.++.+|+.+.+.+ .+...-...|.++++|+.+.+..+ +.......|..+++++.+.+.+ .+..++. .+..+++|
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 455555666666553 343333444555555666655543 4434444455555555555543 3333332 23334555
Q ss_pred ceeeccCCcccCCCCCCccCCcccceeecc
Q 042662 319 LHLNLSSNSFTGPLPLKIGNFNVLIQLDLS 348 (690)
Q Consensus 319 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 348 (690)
+.+++..+ +...-...+.++ .|+.+.+.
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~ 111 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIP 111 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-T
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEEC
Confidence 55555443 322223333443 44444444
No 457
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.79 E-value=0.00065 Score=64.95 Aligned_cols=108 Identities=24% Similarity=0.251 Sum_probs=60.0
Q ss_pred CCCCCCCEEEccCCcCCccCCccccCCCCCCEEECcCC--cccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCC
Q 042662 7 GNLAELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDN--SLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTL 84 (690)
Q Consensus 7 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n--~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 84 (690)
-.+..|+.|++.+..++.. ..|..|++|+.|++|.| ++++.++.-..++++|++|++++|++.- ++++..++.
T Consensus 40 d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~pl~~- 114 (260)
T KOG2739|consen 40 DEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLRPLKE- 114 (260)
T ss_pred ccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccchhhh-
Confidence 3455666666666666522 23556778888888888 4555555445566888888888887762 333322221
Q ss_pred CEEecCCCCCCCCCEEeccCCccCc---cCCccccCCCCCCeEeccc
Q 042662 85 KSLYLHNVRLPNLEELLLWGNNFSG---TIPSFIFNASKLFTLGLEE 128 (690)
Q Consensus 85 ~~L~l~~~~l~~L~~L~L~~n~l~~---~~p~~l~~l~~L~~L~L~~ 128 (690)
+.+|..|++.+|..+. .--.-+.-+++|++|+-.+
T Consensus 115 ---------l~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~d 152 (260)
T KOG2739|consen 115 ---------LENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCD 152 (260)
T ss_pred ---------hcchhhhhcccCCccccccHHHHHHHHhhhhccccccc
Confidence 2234455555444332 1111234457777776443
No 458
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=96.69 E-value=0.00099 Score=63.04 Aligned_cols=30 Identities=30% Similarity=0.499 Sum_probs=27.0
Q ss_pred cEecccCceeEEEEEeCCCcEEEEEEeccc
Q 042662 531 NLIGRGGFGSVYKARIHDGMEAAVKVFDLQ 560 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~~~~~vavk~~~~~ 560 (690)
..||+|+||.||+|..++|..||||+++..
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~ 32 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTS 32 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEec
Confidence 469999999999999988999999998654
No 459
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=96.62 E-value=0.0049 Score=59.10 Aligned_cols=45 Identities=20% Similarity=0.290 Sum_probs=31.4
Q ss_pred CCcccEecccCceeEEEEEeCC-CcEEEEEEecccccchHHHHHHHH
Q 042662 527 FSENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQYRGAFKSFDIEC 572 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~~~~~~~f~~e~ 572 (690)
|.-...+|+|.||.+-.+.... .+.+++|-..... ...++|.+|.
T Consensus 26 y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEf 71 (378)
T KOG1345|consen 26 YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREF 71 (378)
T ss_pred hhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHh
Confidence 5556789999999999988764 4667777654332 2356677775
No 460
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=96.59 E-value=0.00022 Score=67.25 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=27.0
Q ss_pred HhcccC-CcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~-~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||...+ ..++.+-|||.-|++|.||.||..-+.
T Consensus 197 pEllLG~r~yg~~iDiWgAgCimaeMwtrspimq 230 (376)
T KOG0669|consen 197 PELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQ 230 (376)
T ss_pred HHHhhcccccCCcchhHhHHHHHHHHHccCcccc
Confidence 777655 457889999999999999999976544
No 461
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.58 E-value=0.0012 Score=63.21 Aligned_cols=65 Identities=28% Similarity=0.326 Sum_probs=32.2
Q ss_pred CCcccceeecccc--ccccccCccccCCCCCCeeeccCcccccc-CCcccCCCCCCCEEECcCCcCcc
Q 042662 338 NFNVLIQLDLSMN--NFSGVIPTKIGGLKDLQYLFLEYNRLQGS-IPNSIGDLISLKSLNLSNNNLSG 402 (690)
Q Consensus 338 ~l~~L~~L~Ls~n--~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~Ls~n~l~~ 402 (690)
.+++|++|.+|.| .+.+..+.....+++|++|++++|++.-. .-..+..+.+|..||+.+|..+.
T Consensus 63 ~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 63 KLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVTN 130 (260)
T ss_pred CcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhhhhcccCCccc
Confidence 3444444444444 33333333333446666666666655410 01123445566677777776654
No 462
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.53 E-value=0.00087 Score=76.64 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=31.9
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||+..+..++.++|||||||+++||+||+.|++.
T Consensus 549 PE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~ 582 (669)
T cd05610 549 PELLLGKPHGPAVDWWALGVCLFEFLTGIPPFND 582 (669)
T ss_pred HHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 9999988999999999999999999999999863
No 463
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.50 E-value=0.00012 Score=69.99 Aligned_cols=81 Identities=21% Similarity=0.233 Sum_probs=60.2
Q ss_pred CCCCCCEEEccCCcCCccCCccccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCC-ccccCCCCCCE
Q 042662 8 NLAELQKLWLDNNSLTGTIPSSIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVP-TAIFNVSTLKS 86 (690)
Q Consensus 8 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~ 86 (690)
.+.+.+.|+..++.++++ .-...++.|++|.||-|+++..-| |..+++|++|.|..|.|...-- ..+.++++|+.
T Consensus 17 dl~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 17 DLENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 356778899999998853 234589999999999999986544 7789999999999998863311 23456666666
Q ss_pred EecCCC
Q 042662 87 LYLHNV 92 (690)
Q Consensus 87 L~l~~~ 92 (690)
|+|..|
T Consensus 93 LWL~EN 98 (388)
T KOG2123|consen 93 LWLDEN 98 (388)
T ss_pred HhhccC
Confidence 666655
No 464
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=96.47 E-value=0.00016 Score=73.18 Aligned_cols=277 Identities=18% Similarity=0.119 Sum_probs=139.0
Q ss_pred CCCEEEccCCcCCCcCCCCCcccCCCCCCCCCEEEccCCc-CCCCCChhhhhccccCcEEEeecC-cccccCcc-cccCC
Q 042662 144 NLEWLSLNDNYLTSSTPKLSFLSSLSNCKYLEYFGFYNNP-LGGILPRAIGNLSQSMEDFQMHNC-NISGSIPE-EISNL 220 (690)
Q Consensus 144 ~L~~L~L~~n~l~~~~~~~~~l~~l~~l~~L~~L~l~~n~-l~~~~p~~~~~~~~~L~~L~L~~n-~l~~~~p~-~l~~l 220 (690)
.|+.|.+.++.-.+..+ .-....+++++++|.+.++. +++..-..+....+.|++|++..| .++...-. ....+
T Consensus 139 ~lk~LSlrG~r~v~~ss---lrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC 215 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSS---LRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGC 215 (483)
T ss_pred ccccccccccccCCcch---hhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhh
Confidence 35555555554333220 00223455666666655553 333333344444446666666664 33332222 22456
Q ss_pred CCCCEEECCCCc-Cccc-chhhhcCCCCCCEEeCcCCcCccc--CCccccCCCCCCEEEeeCC-cCcccC-cccccCCCC
Q 042662 221 TNLIAIYLGRNK-LNGS-IPIALGKLKKLQLLSLEDNQLEGS--IPDNLCGLAALFQLDLGGN-KLCGFI-PACSGNLTN 294 (690)
Q Consensus 221 ~~L~~L~l~~n~-l~~~-~p~~l~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~n-~l~~~~-~~~~~~l~~ 294 (690)
++|++++++++. +++. +-..+.++..++.+.+.+|.=.+. +-..-+.+..+..+++..+ .++... -..-..+..
T Consensus 216 ~kL~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~ 295 (483)
T KOG4341|consen 216 RKLKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHA 295 (483)
T ss_pred hhHHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhH
Confidence 777777777763 3331 112234555666666655421110 0011123344555665554 233221 011134567
Q ss_pred CCeeeCCCCcc-Cccc--ccccccCCCceeeccCCcc-cCCCCCCc-cCCcccceeecccccccc--ccCccccCCCCCC
Q 042662 295 LRKLYLGSNQL-TSIP--STLWNLKDILHLNLSSNSF-TGPLPLKI-GNFNVLIQLDLSMNNFSG--VIPTKIGGLKDLQ 367 (690)
Q Consensus 295 L~~L~L~~n~l-~~~p--~~~~~~~~L~~L~L~~n~l-~~~~~~~~-~~l~~L~~L~Ls~n~l~~--~~~~~~~~l~~L~ 367 (690)
|+.|..+++.. +..+ .--.+..+|+.|-+..++- +..--..+ .+++.|+.+++..+.... .+...-.+++.|+
T Consensus 296 lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr 375 (483)
T KOG4341|consen 296 LQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLR 375 (483)
T ss_pred hhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhc
Confidence 78888777643 2211 2233567788888877763 21111111 346778888887765421 1222234678889
Q ss_pred eeeccCccccccC-----CcccCCCCCCCEEECcCCcCcc-cCChhhhcCCCCCEEEcCCCc
Q 042662 368 YLFLEYNRLQGSI-----PNSIGDLISLKSLNLSNNNLSG-TIPISLEKLLDLKEINVSFNN 423 (690)
Q Consensus 368 ~L~L~~n~l~~~~-----~~~l~~l~~L~~L~Ls~n~l~~-~~p~~l~~l~~L~~l~ls~n~ 423 (690)
.|.|+++.+.... ...-.....|..+.|+++.... ..-..+...++|+.+++-+++
T Consensus 376 ~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 376 VLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred cCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 9988888654222 1122345678888888886542 222345556677776665543
No 465
>PLN00181 protein SPA1-RELATED; Provisional
Probab=96.41 E-value=0.0012 Score=77.36 Aligned_cols=33 Identities=21% Similarity=0.432 Sum_probs=31.0
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~ 608 (690)
||+..+..++.++|||||||+|+||++|+.|..
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~ 216 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSRE 216 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchh
Confidence 999999999999999999999999999988864
No 466
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=96.32 E-value=0.00018 Score=72.70 Aligned_cols=134 Identities=20% Similarity=0.148 Sum_probs=77.7
Q ss_pred cCCCCCCEEECCCCcC-cccchhhh-cCCCCCCEEeCcCCcC-cccCCc-cccCCCCCCEEEeeCCcCc--ccCcccccC
Q 042662 218 SNLTNLIAIYLGRNKL-NGSIPIAL-GKLKKLQLLSLEDNQL-EGSIPD-NLCGLAALFQLDLGGNKLC--GFIPACSGN 291 (690)
Q Consensus 218 ~~l~~L~~L~l~~n~l-~~~~p~~l-~~l~~L~~L~L~~n~l-~~~~~~-~~~~l~~L~~L~L~~n~l~--~~~~~~~~~ 291 (690)
..+..|+.++.+++.. +...-.++ .++.+|+.|-++.++- +..--. --.+.+.|+.+++..+... +.+...-.+
T Consensus 291 ~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~ 370 (483)
T KOG4341|consen 291 CGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRN 370 (483)
T ss_pred hhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccC
Confidence 3466777777776543 22222223 3567788888777752 211111 1135677777777776432 122333346
Q ss_pred CCCCCeeeCCCCccCc------ccccccccCCCceeeccCCccc-CCCCCCccCCcccceeeccccc
Q 042662 292 LTNLRKLYLGSNQLTS------IPSTLWNLKDILHLNLSSNSFT-GPLPLKIGNFNVLIQLDLSMNN 351 (690)
Q Consensus 292 l~~L~~L~L~~n~l~~------~p~~~~~~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~ 351 (690)
++.|+.+.++.+.+.. +...-..+..|..+.|+++..+ ...-..+..+++|+.+++-+++
T Consensus 371 C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 371 CPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred CchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 7888888888764432 1233345667888888888643 3333455667788888776664
No 467
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=96.32 E-value=0.0035 Score=62.45 Aligned_cols=44 Identities=34% Similarity=0.551 Sum_probs=32.2
Q ss_pred cccEecccCceeEEEEEeCC-CcEEEEEEecccc---cchHHHHHHHH
Q 042662 529 ENNLIGRGGFGSVYKARIHD-GMEAAVKVFDLQY---RGAFKSFDIEC 572 (690)
Q Consensus 529 ~~~~ig~g~~g~vy~~~l~~-~~~vavk~~~~~~---~~~~~~f~~e~ 572 (690)
....||.|+++.||.++..+ |+..|||+..... ....+++.+|.
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~ 63 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQ 63 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHH
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHH
Confidence 34789999999999999865 8999999874332 22345565554
No 468
>PRK09188 serine/threonine protein kinase; Provisional
Probab=96.31 E-value=0.0063 Score=63.37 Aligned_cols=63 Identities=21% Similarity=0.137 Sum_probs=45.6
Q ss_pred hccCCCCcccEecccCceeEEEEEeC--CCcEEEEEEecccc-----cchHHHHHHHHHHHHhcccCCcc
Q 042662 522 QATNGFSENNLIGRGGFGSVYKARIH--DGMEAAVKVFDLQY-----RGAFKSFDIECDMMKQYGREGRV 584 (690)
Q Consensus 522 ~at~~f~~~~~ig~g~~g~vy~~~l~--~~~~vavk~~~~~~-----~~~~~~f~~e~~~~pe~~~~~~~ 584 (690)
..-++|.....||+|+||+||+|... +++.||||++.... ......|.+|++++-.....+.+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv 84 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVV 84 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCC
Confidence 34556878899999999999999874 57888999875331 12345699999998655444433
No 469
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=96.24 E-value=0.0048 Score=58.44 Aligned_cols=30 Identities=40% Similarity=0.571 Sum_probs=26.9
Q ss_pred cEecccCceeEEEEEeCCCcEEEEEEeccc
Q 042662 531 NLIGRGGFGSVYKARIHDGMEAAVKVFDLQ 560 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~~~~~vavk~~~~~ 560 (690)
..||+|+||.||+|...+|+.||||++...
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~ 32 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTS 32 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcC
Confidence 469999999999999888999999998654
No 470
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.18 E-value=0.00026 Score=67.74 Aligned_cols=99 Identities=26% Similarity=0.283 Sum_probs=64.7
Q ss_pred CCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCCCCCCeeeCCCCccCcccc--cccccCCCcee
Q 042662 244 LKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNLTNLRKLYLGSNQLTSIPS--TLWNLKDILHL 321 (690)
Q Consensus 244 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~p~--~~~~~~~L~~L 321 (690)
+.+.+.|+..+|.++++ .....++.|+.|.|+-|+++..-| +..|++|++|+|..|.|.++.+ .+.++++|+.|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 44666777777777643 233457778888888888775543 5677888888888888777553 56677777777
Q ss_pred eccCCcccCCCCCC-----ccCCcccceee
Q 042662 322 NLSSNSFTGPLPLK-----IGNFNVLIQLD 346 (690)
Q Consensus 322 ~L~~n~l~~~~~~~-----~~~l~~L~~L~ 346 (690)
.|..|.-.|.-+.. +.-+++|+.||
T Consensus 94 WL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 94 WLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hhccCCcccccchhHHHHHHHHcccchhcc
Confidence 77777665544322 23345555554
No 471
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=96.06 E-value=0.0011 Score=63.25 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=25.9
Q ss_pred HhcccCCcc---cccceEEehhHHHHHHhcCCCCCCc
Q 042662 576 KQYGREGRV---STNGDVYSFGIMLMETFTRKKPTDE 609 (690)
Q Consensus 576 pe~~~~~~~---~~k~DvysfGv~llel~tg~~p~~~ 609 (690)
||..+...- -..+|+|||.|+++||.|..-|+.+
T Consensus 355 pealqrkped~n~raadmwsfaillwel~trevpfad 391 (448)
T KOG0195|consen 355 PEALQRKPEDLNIRAADMWSFAILLWELNTREVPFAD 391 (448)
T ss_pred HHHHhcCchhcchhhhhHHHHHHHHHHhhcccccccc
Confidence 665544332 3468999999999999999999753
No 472
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.02 E-value=0.0044 Score=64.22 Aligned_cols=64 Identities=20% Similarity=0.110 Sum_probs=50.5
Q ss_pred CcEEEEEEecccccch-HHHHHHHHHHH----HhcccCCcccccceEEehhHHHHHHhcCCCCCCccCC
Q 042662 549 GMEAAVKVFDLQYRGA-FKSFDIECDMM----KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEVFS 612 (690)
Q Consensus 549 ~~~vavk~~~~~~~~~-~~~f~~e~~~~----pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~~~ 612 (690)
...+-||..+....-. .+.|..+|++- ||+..+..+++-+|+|||.++.+||+||..-+++..+
T Consensus 388 ~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG 456 (590)
T KOG1290|consen 388 ECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSG 456 (590)
T ss_pred ccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCC
Confidence 3456778776554333 45677777665 9999999999999999999999999999987776544
No 473
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=95.90 E-value=0.008 Score=58.04 Aligned_cols=51 Identities=10% Similarity=-0.044 Sum_probs=37.8
Q ss_pred cCCCCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHH---------HHHHHHHH
Q 042662 524 TNGFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKS---------FDIECDMM 575 (690)
Q Consensus 524 t~~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~---------f~~e~~~~ 575 (690)
.+.|...+++|.|+||.||.... ++..+|||.+........+. |.+|+..+
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l 89 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQT 89 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHH
Confidence 45688889999999999999766 57789999997654332222 57786655
No 474
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=95.80 E-value=0.003 Score=61.40 Aligned_cols=35 Identities=11% Similarity=0.175 Sum_probs=31.1
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCcc
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEV 610 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~ 610 (690)
||..-..++...+|+||.||+++-|++|-.|+...
T Consensus 232 Pevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~ 266 (400)
T KOG0604|consen 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_pred HHHhCchhcCCCCCccchhHHHHHhhcCCCccccc
Confidence 78887888999999999999999999999997543
No 475
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=95.77 E-value=0.015 Score=57.19 Aligned_cols=43 Identities=16% Similarity=0.206 Sum_probs=35.6
Q ss_pred HhcccCCcccccceEEehhHHHHHHhcCCCCCCccCCCcccHHHHHH
Q 042662 576 KQYGREGRVSTNGDVYSFGIMLMETFTRKKPTDEVFSGEMTLKRWVN 622 (690)
Q Consensus 576 pe~~~~~~~~~k~DvysfGv~llel~tg~~p~~~~~~~~~~l~~~~~ 622 (690)
||...+..+.++.||||.||++.||++|+--+ .++..+-.|-+
T Consensus 186 pevil~~~~ke~vdiwSvGci~gEli~~~Vlf----~g~d~idQ~~k 228 (369)
T KOG0665|consen 186 PEVILGMGYKENVDIWSVGCIMGELILGTVLF----PGKDHIDQWNK 228 (369)
T ss_pred chheeccCCcccchhhhhhhHHHHHhhceEEe----cCchHHHHHHH
Confidence 89888878999999999999999999998543 35556777765
No 476
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=95.25 E-value=0.014 Score=56.05 Aligned_cols=37 Identities=27% Similarity=0.424 Sum_probs=29.1
Q ss_pred cCCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccc
Q 042662 524 TNGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQ 560 (690)
Q Consensus 524 t~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~ 560 (690)
.+.+.+..++|+|...+|-++... .|...|||+++..
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~ 53 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVT 53 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEec
Confidence 345667889999999999888764 5788999998643
No 477
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.16 E-value=0.0073 Score=34.43 Aligned_cols=12 Identities=67% Similarity=0.791 Sum_probs=5.1
Q ss_pred CCEEECcCCccc
Q 042662 36 LSSLDLSDNSLT 47 (690)
Q Consensus 36 L~~L~Ls~n~l~ 47 (690)
|++|||++|+++
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 344444444444
No 478
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=95.03 E-value=0.018 Score=54.26 Aligned_cols=30 Identities=37% Similarity=0.431 Sum_probs=26.7
Q ss_pred cEecccCceeEEEEEeCCCcEEEEEEeccc
Q 042662 531 NLIGRGGFGSVYKARIHDGMEAAVKVFDLQ 560 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~~~~~vavk~~~~~ 560 (690)
+.||+|+||.||+|...+|+.||||++...
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~ 32 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTG 32 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecC
Confidence 569999999999999988999999988653
No 479
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=94.84 E-value=0.025 Score=60.02 Aligned_cols=33 Identities=15% Similarity=0.289 Sum_probs=27.4
Q ss_pred HhcccCCccccc-ceEEehhHHHHHHhcCCCCCC
Q 042662 576 KQYGREGRVSTN-GDVYSFGIMLMETFTRKKPTD 608 (690)
Q Consensus 576 pe~~~~~~~~~k-~DvysfGv~llel~tg~~p~~ 608 (690)
||...+.++--| -|+|+.||+|+-++-..-|+.
T Consensus 737 pevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 737 PEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999888777544 799999999998888887764
No 480
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=94.51 E-value=0.01 Score=64.00 Aligned_cols=34 Identities=44% Similarity=0.656 Sum_probs=26.7
Q ss_pred CCcccEecccCceeEEEEEeC-CCcEEEEEEeccc
Q 042662 527 FSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQ 560 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~ 560 (690)
|.--..+|.|.||.|||++-. .+..+|||.++..
T Consensus 17 yellqrvgsgTygdvyKaRd~~s~elaavkvVkLe 51 (829)
T KOG0576|consen 17 YELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE 51 (829)
T ss_pred hhheeeecCCcccchhhhcccccCchhhheeeecc
Confidence 444477999999999999864 5788999987543
No 481
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.43 E-value=0.015 Score=33.18 Aligned_cols=22 Identities=55% Similarity=0.650 Sum_probs=18.1
Q ss_pred CCCEEEccCCcCCccCCccccCC
Q 042662 11 ELQKLWLDNNSLTGTIPSSIFNL 33 (690)
Q Consensus 11 ~L~~L~Ls~n~l~~~~~~~~~~l 33 (690)
+|++|+|++|.++ .+|++|++|
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~~l 22 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFSNL 22 (22)
T ss_dssp TESEEEETSSEES-EEGTTTTT-
T ss_pred CccEEECCCCcCE-eCChhhcCC
Confidence 5899999999999 788777754
No 482
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=94.28 E-value=0.0056 Score=67.41 Aligned_cols=15 Identities=27% Similarity=0.211 Sum_probs=8.4
Q ss_pred cCCCCCCeeeccCcc
Q 042662 361 GGLKDLQYLFLEYNR 375 (690)
Q Consensus 361 ~~l~~L~~L~L~~n~ 375 (690)
..++.++.+.+.++.
T Consensus 359 ~~~~~l~~~~l~~~~ 373 (482)
T KOG1947|consen 359 RSCPKLTDLSLSYCG 373 (482)
T ss_pred hcCCCcchhhhhhhh
Confidence 455555555555555
No 483
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=94.21 E-value=0.051 Score=58.19 Aligned_cols=48 Identities=27% Similarity=0.369 Sum_probs=34.4
Q ss_pred HhcccCC-------cccccceEEehhHHHHHHhcCCCCCCccCCC--cccHHHHHHh
Q 042662 576 KQYGREG-------RVSTNGDVYSFGIMLMETFTRKKPTDEVFSG--EMTLKRWVND 623 (690)
Q Consensus 576 pe~~~~~-------~~~~k~DvysfGv~llel~tg~~p~~~~~~~--~~~l~~~~~~ 623 (690)
||..... ..+.++|||||||++.|+++.+.|++..... ...++.+++.
T Consensus 120 Pellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~ 176 (484)
T KOG1023|consen 120 PELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK 176 (484)
T ss_pred HHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh
Confidence 8865442 2588899999999999999999999864322 1235555544
No 484
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=94.21 E-value=0.039 Score=63.24 Aligned_cols=47 Identities=23% Similarity=0.283 Sum_probs=34.1
Q ss_pred CCCcccEecccCceeEEEEEeCCCcEEEEEEecccc-cchHHHHHHHHH
Q 042662 526 GFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQY-RGAFKSFDIECD 573 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~-~~~~~~f~~e~~ 573 (690)
++.-.+.+|++.|=+|.||+.+.|. |+||++-... ....+.|.++++
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~ 71 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLE 71 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHH
Confidence 3455577999999999999998887 8899884433 334555655544
No 485
>smart00090 RIO RIO-like kinase.
Probab=94.17 E-value=0.046 Score=53.69 Aligned_cols=32 Identities=31% Similarity=0.354 Sum_probs=27.3
Q ss_pred cccEecccCceeEEEEE--eCCCcEEEEEEeccc
Q 042662 529 ENNLIGRGGFGSVYKAR--IHDGMEAAVKVFDLQ 560 (690)
Q Consensus 529 ~~~~ig~g~~g~vy~~~--l~~~~~vavk~~~~~ 560 (690)
-...||+|+||.||+|+ ..+|+.||||++...
T Consensus 32 i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~ 65 (237)
T smart00090 32 IGGCISTGKEANVYHALDFDGSGKERAVKIYRTG 65 (237)
T ss_pred hCCeeccCcceeEEEEEecCCCCcEEEEEEEEcC
Confidence 34679999999999998 668999999998643
No 486
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=93.59 E-value=0.091 Score=50.02 Aligned_cols=33 Identities=39% Similarity=0.339 Sum_probs=28.6
Q ss_pred CCcccEecccCceeEEEEEeCCCcEEEEEEecc
Q 042662 527 FSENNLIGRGGFGSVYKARIHDGMEAAVKVFDL 559 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~ 559 (690)
+...+.||+|+||.||+|..++|+.||||++..
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~ 49 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRL 49 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEec
Confidence 445578999999999999998899999998754
No 487
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.24 E-value=0.00069 Score=72.98 Aligned_cols=62 Identities=29% Similarity=0.363 Sum_probs=35.5
Q ss_pred cceeeccccccccc----cCccccCC-CCCCeeeccCcccccc----CCcccCCCCCCCEEECcCCcCccc
Q 042662 342 LIQLDLSMNNFSGV----IPTKIGGL-KDLQYLFLEYNRLQGS----IPNSIGDLISLKSLNLSNNNLSGT 403 (690)
Q Consensus 342 L~~L~Ls~n~l~~~----~~~~~~~l-~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~ 403 (690)
+..+++..|.+... ....+..+ ..++.++++.|.++.. +...+..++.++.+.++.|.+...
T Consensus 235 ~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~~ 305 (478)
T KOG4308|consen 235 LRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTDY 305 (478)
T ss_pred hHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccccH
Confidence 44456666655432 11223333 4567777777777643 233455667788888888877643
No 488
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.10 E-value=0.00086 Score=72.28 Aligned_cols=183 Identities=26% Similarity=0.247 Sum_probs=98.8
Q ss_pred CCEEECCCCcCcccch----hhhcCCCCCCEEeCcCCcCcccCCccccCCCCCCEEEeeCCcCcccCcccccCC-CCCCe
Q 042662 223 LIAIYLGRNKLNGSIP----IALGKLKKLQLLSLEDNQLEGSIPDNLCGLAALFQLDLGGNKLCGFIPACSGNL-TNLRK 297 (690)
Q Consensus 223 L~~L~l~~n~l~~~~p----~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~ 297 (690)
+..+.+.+|.+..... ..+.....|+.|+++.|.+.+.--..+. ..+... ..+++
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~--------------------~~l~~~~~~l~~ 148 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLC--------------------EGLRLPQCLLQT 148 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHH--------------------hhcccchHHHHH
Confidence 5666677776654322 2334455666666666665532111111 011111 23344
Q ss_pred eeCCCCccCc-----ccccccccCCCceeeccCCcccC----CCCCC----ccCCcccceeecccccccccc----Cccc
Q 042662 298 LYLGSNQLTS-----IPSTLWNLKDILHLNLSSNSFTG----PLPLK----IGNFNVLIQLDLSMNNFSGVI----PTKI 360 (690)
Q Consensus 298 L~L~~n~l~~-----~p~~~~~~~~L~~L~L~~n~l~~----~~~~~----~~~l~~L~~L~Ls~n~l~~~~----~~~~ 360 (690)
|++..|.++. +...+.....++.++++.|.+.. .++.. +....++++|++++|.++... ...+
T Consensus 149 L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l 228 (478)
T KOG4308|consen 149 LELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVL 228 (478)
T ss_pred HHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHH
Confidence 4444444443 22333334455555555555421 11222 223567777888777765221 1223
Q ss_pred cCCCC-CCeeeccCcccccc----CCcccCCC-CCCCEEECcCCcCcccCC----hhhhcCCCCCEEEcCCCcCc
Q 042662 361 GGLKD-LQYLFLEYNRLQGS----IPNSIGDL-ISLKSLNLSNNNLSGTIP----ISLEKLLDLKEINVSFNNLE 425 (690)
Q Consensus 361 ~~l~~-L~~L~L~~n~l~~~----~~~~l~~l-~~L~~L~Ls~n~l~~~~p----~~l~~l~~L~~l~ls~n~l~ 425 (690)
...++ +..+++..|.+... ....+..+ ..+++++++.|.++..-. ..+...+.++.+.+++|++.
T Consensus 229 ~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 229 ASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred hccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 44445 77799999987643 22334445 678999999999986544 34455667888888888875
No 489
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=92.81 E-value=0.0033 Score=58.84 Aligned_cols=88 Identities=19% Similarity=0.172 Sum_probs=57.4
Q ss_pred cccCCCCCCEEECcCCcccccCCcccCCCCCCCeeecccCcCcccCCccccCCCCCCEEecCCCCCCCCCEEeccCCccC
Q 042662 29 SIFNLSSLSSLDLSDNSLTGEIPYEIGNLHNLEWMAFSFNKLVGVVPTAIFNVSTLKSLYLHNVRLPNLEELLLWGNNFS 108 (690)
Q Consensus 29 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~~~l~~L~~L~L~~n~l~ 108 (690)
.+......+.||++.|++. .+...|+.++.|..|+++.|++. ..|..+++...+ ..+++..|..+
T Consensus 37 ei~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~-------------~~~~~~~n~~~ 101 (326)
T KOG0473|consen 37 EIASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRET-------------VNAASHKNNHS 101 (326)
T ss_pred hhhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHH-------------HHHHhhccchh
Confidence 3555667777777777765 34455666777777777777766 566666665543 33344444444
Q ss_pred ccCCccccCCCCCCeEecccCccc
Q 042662 109 GTIPSFIFNASKLFTLGLEENSFS 132 (690)
Q Consensus 109 ~~~p~~l~~l~~L~~L~L~~n~l~ 132 (690)
..|.+++..++++.+++..|.++
T Consensus 102 -~~p~s~~k~~~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 102 -QQPKSQKKEPHPKKNEQKKTEFF 124 (326)
T ss_pred -hCCccccccCCcchhhhccCcch
Confidence 56777777888888888887764
No 490
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=92.67 E-value=0.012 Score=64.84 Aligned_cols=109 Identities=22% Similarity=0.089 Sum_probs=53.6
Q ss_pred CCCCCEEECCCCcCccc--chhhhcCCCCCCEEeCcCC-cCcccCC----ccccCCCCCCEEEeeCCc-CcccCccccc-
Q 042662 220 LTNLIAIYLGRNKLNGS--IPIALGKLKKLQLLSLEDN-QLEGSIP----DNLCGLAALFQLDLGGNK-LCGFIPACSG- 290 (690)
Q Consensus 220 l~~L~~L~l~~n~l~~~--~p~~l~~l~~L~~L~L~~n-~l~~~~~----~~~~~l~~L~~L~L~~n~-l~~~~~~~~~- 290 (690)
+++|+.+.+..+.-... .-.....++.|+.|+++++ ......+ .....+++|+.|+++.+. ++...-..+.
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~ 266 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALAS 266 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHh
Confidence 56666666665532222 2233455667777776652 1111111 122334666666666655 3332222222
Q ss_pred CCCCCCeeeCCCCc-cCc--ccccccccCCCceeeccCCcc
Q 042662 291 NLTNLRKLYLGSNQ-LTS--IPSTLWNLKDILHLNLSSNSF 328 (690)
Q Consensus 291 ~l~~L~~L~L~~n~-l~~--~p~~~~~~~~L~~L~L~~n~l 328 (690)
.+++|+.|.+.++. ++. +-.....++.|++|+++.+..
T Consensus 267 ~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 267 RCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHG 307 (482)
T ss_pred hCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCcc
Confidence 25667776665555 343 333344556666666666553
No 491
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=92.67 E-value=0.16 Score=54.70 Aligned_cols=34 Identities=32% Similarity=0.465 Sum_probs=29.2
Q ss_pred CCCcccEecccCceeEEEEEeCCCcEEEEEEeccc
Q 042662 526 GFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQ 560 (690)
Q Consensus 526 ~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~ 560 (690)
.|+ .+.+|.|++|.||+|++.+|+.||||+....
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~ 152 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPG 152 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence 344 3679999999999999999999999998654
No 492
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=92.19 E-value=0.21 Score=47.50 Aligned_cols=43 Identities=19% Similarity=0.179 Sum_probs=30.9
Q ss_pred EecccCceeEEEEEeCCCcEEEEEEeccccc--------chHHHHHHHHHHH
Q 042662 532 LIGRGGFGSVYKARIHDGMEAAVKVFDLQYR--------GAFKSFDIECDMM 575 (690)
Q Consensus 532 ~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~--------~~~~~f~~e~~~~ 575 (690)
+||+|+||.||+|.+ +|..|+||+...... .....+.+|++.+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l 51 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLL 51 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHH
Confidence 489999999999996 678899998654321 1124566777766
No 493
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.02 E-value=0.086 Score=27.80 Aligned_cols=14 Identities=64% Similarity=0.788 Sum_probs=4.9
Q ss_pred CCCeeeCCCCccCc
Q 042662 294 NLRKLYLGSNQLTS 307 (690)
Q Consensus 294 ~L~~L~L~~n~l~~ 307 (690)
+|+.|++++|+++.
T Consensus 2 ~L~~L~l~~n~L~~ 15 (17)
T PF13504_consen 2 NLRTLDLSNNRLTS 15 (17)
T ss_dssp T-SEEEETSS--SS
T ss_pred ccCEEECCCCCCCC
Confidence 34444444444443
No 494
>PRK10345 hypothetical protein; Provisional
Probab=91.93 E-value=0.29 Score=46.88 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=36.1
Q ss_pred CCcccEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHHHhc
Q 042662 527 FSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMMKQY 578 (690)
Q Consensus 527 f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~pe~ 578 (690)
.++...||+|+||.||+ .++....+||+.........+.+.+|++.+-..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L 53 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHL 53 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHh
Confidence 45668999999999996 433333479988765444567899999887544
No 495
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=91.81 E-value=0.4 Score=53.47 Aligned_cols=62 Identities=15% Similarity=0.117 Sum_probs=38.4
Q ss_pred hhhHhhhccCCCCcccEecccCceeEEEEEeCCCcEEEEEEeccc--cc------chHHHHHHHHHHHHhc
Q 042662 516 TYLELFQATNGFSENNLIGRGGFGSVYKARIHDGMEAAVKVFDLQ--YR------GAFKSFDIECDMMKQY 578 (690)
Q Consensus 516 ~~~~l~~at~~f~~~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~--~~------~~~~~f~~e~~~~pe~ 578 (690)
++......+..|...+.||+|+||+||+|.+.+.. +++|+.... .. .....|..|++.+-..
T Consensus 324 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 393 (535)
T PRK09605 324 TWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEA 393 (535)
T ss_pred eeccccccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh
Confidence 34444445555677899999999999999986544 444433211 11 1234578888877433
No 496
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=91.77 E-value=0.087 Score=45.34 Aligned_cols=31 Identities=32% Similarity=0.399 Sum_probs=27.7
Q ss_pred ccEecccCceeEEEEEeCCCcEEEEEEeccc
Q 042662 530 NNLIGRGGFGSVYKARIHDGMEAAVKVFDLQ 560 (690)
Q Consensus 530 ~~~ig~g~~g~vy~~~l~~~~~vavk~~~~~ 560 (690)
.+-+|.|+.|.||+|++.+|+.||||+....
T Consensus 16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~ 46 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKDGEEVAVKVQRPG 46 (119)
T ss_pred cchhhheehhhheeeeecccchhhhhhcchH
Confidence 3679999999999999999999999987654
No 497
>PRK14879 serine/threonine protein kinase; Provisional
Probab=91.07 E-value=0.38 Score=46.12 Aligned_cols=45 Identities=22% Similarity=0.220 Sum_probs=32.6
Q ss_pred cEecccCceeEEEEEeCCCcEEEEEEecccccc--------hHHHHHHHHHHHH
Q 042662 531 NLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRG--------AFKSFDIECDMMK 576 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~--------~~~~f~~e~~~~p 576 (690)
+.||+|++|.||+|.. +|..|+||+....... ....+..|++.+.
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 54 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMS 54 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999998 6778999986543211 1235777877763
No 498
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=91.01 E-value=0.35 Score=55.52 Aligned_cols=52 Identities=29% Similarity=0.344 Sum_probs=39.0
Q ss_pred CCCCcccEecccCceeEEEEEeC-CCcEEEEEEeccccc---chHHHHHHHHHHHH
Q 042662 525 NGFSENNLIGRGGFGSVYKARIH-DGMEAAVKVFDLQYR---GAFKSFDIECDMMK 576 (690)
Q Consensus 525 ~~f~~~~~ig~g~~g~vy~~~l~-~~~~vavk~~~~~~~---~~~~~f~~e~~~~p 576 (690)
++|.-.+.||+|+||.||+|... ++..||||++..... .....|..|+..+.
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~ 59 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALA 59 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHH
Confidence 45666688999999999999986 588999999864331 22356778887763
No 499
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=90.73 E-value=0.64 Score=42.52 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=51.5
Q ss_pred cEecccCceeEEEEEeCCCcEEEEEEecccccchHHHHHHHHHHHHhcccCCcccccceEEehhHHHHHHhcCCCC
Q 042662 531 NLIGRGGFGSVYKARIHDGMEAAVKVFDLQYRGAFKSFDIECDMMKQYGREGRVSTNGDVYSFGIMLMETFTRKKP 606 (690)
Q Consensus 531 ~~ig~g~~g~vy~~~l~~~~~vavk~~~~~~~~~~~~f~~e~~~~pe~~~~~~~~~k~DvysfGv~llel~tg~~p 606 (690)
..+|+|.+|.||.|.+ .|..||+|+-..++. ...+..|++++ |...+-.++.+.=-|++-.+.+|-+-|+.-
T Consensus 28 ~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds~--r~~l~kEakiL-eil~g~~~~p~vy~yg~~~i~me~i~G~~L 99 (201)
T COG2112 28 KELAKGTTSVVYLGEW-RGGEVALKVRRRDSP--RRNLEKEAKIL-EILAGEGVTPEVYFYGEDFIRMEYIDGRPL 99 (201)
T ss_pred hhhhcccccEEEEeec-cCceEEEEEecCCcc--hhhHHHHHHHH-HHhhhcCCCceEEEechhhhhhhhhcCcch
Confidence 5699999999999999 456889998766543 45678888764 444555556665556666667787777654
No 500
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=90.62 E-value=0.015 Score=54.67 Aligned_cols=87 Identities=21% Similarity=0.211 Sum_probs=51.8
Q ss_pred ccccCCCceeeccCCcccCCCCCCccCCcccceeeccccccccccCccccCCCCCCeeeccCccccccCCcccCCCCCCC
Q 042662 312 LWNLKDILHLNLSSNSFTGPLPLKIGNFNVLIQLDLSMNNFSGVIPTKIGGLKDLQYLFLEYNRLQGSIPNSIGDLISLK 391 (690)
Q Consensus 312 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 391 (690)
+......+.||++.|++. .+-..++.++.|..||++.|.+. ..|..++....++.+++..|..+ ..|.+++..++++
T Consensus 38 i~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k 114 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPK 114 (326)
T ss_pred hhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcc
Confidence 344455666666666654 23334455566666666666665 45566666666666666666555 5566666666666
Q ss_pred EEECcCCcCc
Q 042662 392 SLNLSNNNLS 401 (690)
Q Consensus 392 ~L~Ls~n~l~ 401 (690)
++++..|.+.
T Consensus 115 ~~e~k~~~~~ 124 (326)
T KOG0473|consen 115 KNEQKKTEFF 124 (326)
T ss_pred hhhhccCcch
Confidence 6666666543
Done!