Your job contains 1 sequence.
>042663
MDASAYPMMQNKDFELHDFIDDPNIDQFIDLIQGENEILEPSFGCTFVSECIVDNQIGST
GEDMFGLNGDANGGVQEEDNDGDDSSGRARTTTTKCTKKPKVDRSRALISERRRRGKMKE
KLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQDQEST
GNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLTSFSI
QNSNLTTVSEKFVLTFTSSVRGSDQNMHLTNMKLWVTKALVNQGFEVLTPSSA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042663
(293 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 555 1.1e-53 1
UNIPROTKB|Q7XVB7 - symbol:OSJNBa0072D21.7 "OSJNBa0072D21.... 112 1.3e-16 3
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 153 4.0e-12 2
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 156 7.6e-12 2
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 180 1.7e-11 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 177 4.1e-11 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 149 4.0e-10 2
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 164 1.7e-09 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 142 9.4e-09 2
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 143 1.5e-08 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 153 2.0e-08 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 145 4.6e-08 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 148 1.2e-07 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 145 1.6e-07 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 144 3.0e-07 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 143 4.4e-07 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 140 6.2e-07 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 142 7.7e-07 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 133 8.4e-07 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 134 1.5e-06 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 137 1.6e-06 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 134 1.7e-06 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 136 2.0e-06 2
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 136 2.4e-06 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 133 2.8e-06 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 131 5.4e-06 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 128 9.5e-06 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 124 2.9e-05 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 124 5.4e-05 2
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 117 0.00013 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 117 0.00017 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 115 0.00024 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 115 0.00026 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 113 0.00083 1
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 133/279 (47%), Positives = 173/279 (62%)
Query: 13 DFELHDFIDDPNIDQFIDLIQGENEILEPSFGCTFVSECIVDNQIGSTGEDMFGLNGDAN 72
DF+L + P FID EN+ + F +D+ + + G + A
Sbjct: 46 DFDLGPLQNSPC---FID----ENQFIPTPVDDLFDELPDLDSNVAESFRSFDGDSVRAG 98
Query: 73 GGVQEED-NDGDDSSGRARXXXXXXXXXXXVDXXXXXXXXXXXXGKMKEKLYALRALVPN 131
G EED NDGDDSS A D G+MK+KLYALR+LVPN
Sbjct: 99 GEEDEEDYNDGDDSS--ATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPN 156
Query: 132 ITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQDQESTGNTKKTR-VRS 190
ITKMDKASIVGDAVLYVQ+LQ +AKKLK++IA LEASL QE + +KT+ R
Sbjct: 157 ITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEASLNSTGGY-QEHAPDAQKTQPFRG 215
Query: 191 KKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLTTVS- 249
P KKI+QM V QVEE+GFYVRLVC+KGEGVA SLY++LESLTSF +QNSNL++ S
Sbjct: 216 INPPASKKIIQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSP 275
Query: 250 EKFVLTFTSSVRGSDQNMHLTNMKLWVTKALVNQGFEVL 288
+ ++LT+T +Q+++L N+KLW+T +L+NQGFE +
Sbjct: 276 DTYLLTYTLDGTCFEQSLNLPNLKLWITGSLLNQGFEFI 314
Score = 121 (47.7 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 35/97 (36%), Positives = 48/97 (49%)
Query: 1 MDASAYPMMQNKDFELHDFIDDPNIDQFIDLIQG------ENEILEPSFGCTFVSECIVD 54
M+ + D ELH+F+ DPN DQFI+LI+G EN +L+ G S C +D
Sbjct: 1 MEGRVNALSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFID 60
Query: 55 -NQ-IGSTGEDMFGLNGDANGGVQEEDNDGDDSSGRA 89
NQ I + +D+F D + V E D S RA
Sbjct: 61 ENQFIPTPVDDLFDELPDLDSNVAESFRSFDGDSVRA 97
>UNIPROTKB|Q7XVB7 [details] [associations]
symbol:OSJNBa0072D21.7 "OSJNBa0072D21.7 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG236355 EMBL:AL662977 ProteinModelPortal:Q7XVB7
Gramene:Q7XVB7 Uniprot:Q7XVB7
Length = 383
Score = 112 (44.5 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 30/103 (29%), Positives = 54/103 (52%)
Query: 194 PTCKKIMQMGVFQVEERGFYVRLVCSK--------GEGVAVSLYQALESLTSFSIQNSNL 245
P ++ +G QV E F+V + C G GVA + A+ESL+ F++++S +
Sbjct: 272 PHGARVAHVGAAQVGEGRFFVTVECEPAAAAARGGGGGVAAPVCAAVESLSCFTVESSTV 331
Query: 246 TTVSEKFVLTFTSSVRGSDQNMHLTN---MKLWVTKALVNQGF 285
++ V T T V +++++ + +KLWV AL+ +GF
Sbjct: 332 GCSPDRVVATLTLKVSEAEEDVSAISECTVKLWVMAALLKEGF 374
Score = 110 (43.8 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 134 KMDKASIVGDAVLYVQDLQMKAKKLKTEIADLE 166
+MDKASI+ DAV+YV+DLQ A+KLK E+A LE
Sbjct: 193 QMDKASIIADAVVYVKDLQAHARKLKEEVAALE 225
Score = 87 (35.7 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 28/73 (38%), Positives = 34/73 (46%)
Query: 68 NGDANGGVQEEDN-----DGDDSSGRARXXXXXXXXXXXVDXXXXXXXXXXXXGKMKEKL 122
+GD +G V D DGD+S+ R R D +MKEKL
Sbjct: 102 DGDGDGDVSPRDGELGDGDGDNSATRKRR-----------DRSKTIVSERKRRVRMKEKL 150
Query: 123 YALRALVPNITKM 135
Y LRALVPNITK+
Sbjct: 151 YELRALVPNITKV 163
Score = 38 (18.4 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 66 GLNGDANGGVQEEDNDGDD 84
G + D NGGV GDD
Sbjct: 59 GGDDDDNGGVDGGVGGGDD 77
Score = 37 (18.1 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 57 IGSTGEDMFGLNGDANGG---VQEEDND 81
+G +D G++G GG +QE N+
Sbjct: 58 VGGDDDDNGGVDGGVGGGDDRMQEWQNN 85
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 153 (58.9 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 29/58 (50%), Positives = 46/58 (79%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAER 174
K+ ++LYALR+LVP ITK+D+ASI+GDA+ YV++LQ +AK+L+ E+ + + G+ R
Sbjct: 325 KLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETEDGSNR 382
Score = 76 (31.8 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 24/82 (29%), Positives = 39/82 (47%)
Query: 201 QMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLTTVSEKFVLTFTSSV 260
Q+ V Q++ R F+V+++C G L +AL+SL + N+N T F V
Sbjct: 429 QVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSL-GLEVTNANTTRYLSLVSNVF--KV 485
Query: 261 RGSDQNM----HLTNMKLWVTK 278
+D M H+ N L +T+
Sbjct: 486 EKNDNEMVQAEHVRNSLLEITR 507
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 156 (60.0 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 30/52 (57%), Positives = 43/52 (82%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEAS 168
K+ EKLYALR++VPNITKMDKASI+ DA+ Y+Q LQ + +++ E+A LE++
Sbjct: 104 KLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLREVAALESA 155
Score = 59 (25.8 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 198 KIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLTTVS 249
+I ++ V +V +R V + CSK + +ALE L + +N+T+V+
Sbjct: 218 EIQELRVSEVGDRVLVVSVTCSKRRDAMARVCRALEELR-LRVITANITSVA 268
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 180 (68.4 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 38/140 (27%), Positives = 82/140 (58%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
K+ ++ Y+LRA+VPN++KMDKAS++GDA+ Y+ +L+ K ++ +++ +++ L G ++
Sbjct: 426 KLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEG 485
Query: 177 Q--ESTGNTKKTRVRSKKNPTCKKI-MQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALE 233
+ G+ K R S ++ T I M++ V ++ +R+ C K + +AL+
Sbjct: 486 NNGKGCGSRAKERKSSNQDSTASSIEMEIDV-KIIGWDVMIRVQCGKKDHPGARFMEALK 544
Query: 234 SLTSFSIQNSNLTTVSEKFV 253
L + +++L+ V++ +
Sbjct: 545 EL-DLEVNHASLSVVNDLMI 563
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 177 (67.4 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 47/166 (28%), Positives = 97/166 (58%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
K+ ++ Y+LRA+VPN++KMDKAS++GDA+ Y+ +L+ K +K +++ +L+ + + +
Sbjct: 427 KLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQI---DVMN 483
Query: 177 QESTGNTKKTRVRSKK--NPTCKKIMQMGVFQVEERGF--YVRLVCSKGEGVAVSLYQAL 232
+E+ GN K + V+ +K N +++M V V+ G+ +R+ CSK +AL
Sbjct: 484 KEA-GNAKSS-VKDRKCLNQESSVLIEMEV-DVKIIGWDAMIRIQCSKRNHPGAKFMEAL 540
Query: 233 ESLTSFSIQNSNLTTVSEKFVLTFTSSVRGSDQNMHLTNMKLWVTK 278
+ L + +++L+ V++ + T V+ +Q +K+ +T+
Sbjct: 541 KEL-DLEVNHASLSVVNDLMIQQAT--VKMGNQFFTQDQLKVALTE 583
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 149 (57.5 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 32/80 (40%), Positives = 53/80 (66%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLE--ASLTGAER 174
++ EKL+ALRA+VP ITKMDKASIV DA+ +++ LQ + ++L EI+ L+ A++
Sbjct: 108 RLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEISVLQSAAAVAATAV 167
Query: 175 QDQESTGNTKKTRVRSKKNP 194
+D + +G T + + + P
Sbjct: 168 EDVDDSGVTMPSMKKLRSTP 187
Score = 50 (22.7 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 201 QMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESL----TSFSIQNSNLTTVSEKFV 253
Q+ V +V E+ V + C+K G + A+ESL S S+ + T V FV
Sbjct: 233 QLQVSKVGEKTVAVSIRCAKTRGAMAKVCHAVESLYLKVVSASVAAVDGTIVHTMFV 289
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 44/140 (31%), Positives = 77/140 (55%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
K+ ++ YALRA+VPN++KMDKAS++GDA+ Y+ +L K+K +KTE L+ E
Sbjct: 463 KLNQRFYALRAVVPNVSKMDKASLLGDAIAYINEL--KSKVVKTESEKLQIK-NQLEEVK 519
Query: 177 QESTGNTKKTRVRSKKNPTCKKIMQMGV-FQVEERGF--YVRLVCSKGEGVAVSLYQALE 233
E G K + + +C I +G+ +V+ G+ +R+ SK A L AL
Sbjct: 520 LELAGR-KASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPAARLMSALM 578
Query: 234 SLTSFSIQNSNLTTVSEKFV 253
L + +++++ V++ +
Sbjct: 579 DL-ELEVNHASMSVVNDLMI 597
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 142 (55.0 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 36/93 (38%), Positives = 50/93 (53%)
Query: 72 NGGVQEEDNDGDDSSGRARXXXXXXXXXXXVDXXXXXXXXXXXXGKMKEKLYALRALVPN 131
+GG E+D DG+ SG A+ K+ LY LR+LVPN
Sbjct: 262 HGGDPEDDGDGEGRSGGAKR-----------QQCKNLEAERKRRKKLNGHLYKLRSLVPN 310
Query: 132 ITKMDKASIVGDAVLYVQDLQMKAKKLKTEIAD 164
ITKMD+ASI+GDA+ Y+ LQ + K+L+ E+ D
Sbjct: 311 ITKMDRASILGDAIDYIVGLQKQVKELQDELED 343
Score = 56 (24.8 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 201 QMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLTTVSEKFVLTFTSSV 260
Q+ V QV+ +V+++ G V L A+ +L + N N+TT + F V
Sbjct: 417 QLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNAL-GLEVINVNVTTYKTLVLNVFRVMV 475
Query: 261 RGSD 264
R S+
Sbjct: 476 RDSE 479
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 143 (55.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 43/135 (31%), Positives = 70/135 (51%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
K+ +L ALR+ VP +T M KASIV DA+ Y+ +LQ K L ++E + D
Sbjct: 43 KLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFHEMEEA---PPEID 99
Query: 177 QESTGNTKKTRVR-SKKNPTCKKI-MQMGV--FQVEERGFYVRLVCSKGEGVAVSLYQAL 232
+E T K V S N KK+ ++ V ++ ER F+++++ K +G+ + +
Sbjct: 100 EEQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKIITEKRDGIFTKFMEVM 159
Query: 233 ESLTSFSIQNSNLTT 247
L F I + +LTT
Sbjct: 160 RFL-GFEIIDISLTT 173
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 153 (58.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 40/132 (30%), Positives = 71/132 (53%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADL-EASLTGAERQ 175
++ + +Y LRA+VP ITK++K I DAV Y+ +L ++ +KL+ E+ + E +
Sbjct: 275 RINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGINEMECKEIAAE 334
Query: 176 DQESTGNTKKTRVRSKKNPTCKKI-MQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALES 234
+Q + + + RV SK N KK +++ V + ER F +R+V + L +A++
Sbjct: 335 EQSAIADPEAERVSSKSNKRVKKNEVKIEVHETGERDFLIRVVQEHKQDGFKRLIEAVD- 393
Query: 235 LTSFSIQNSNLT 246
L I + N T
Sbjct: 394 LCELEIIDVNFT 405
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 145 (56.1 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/153 (29%), Positives = 82/153 (53%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
K+ ++L+ALR++VPNI+K+DKAS++ D++ Y+Q+L + K L+ EI +LE+ T E
Sbjct: 65 KLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPV 124
Query: 177 QESTGNTKKTRVR--SKKNPT-CKKIMQMGV------FQVEERGFYVRLVCSKGEGVAVS 227
++ N +T ++ S N KK QM + +E V + K V ++
Sbjct: 125 RDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCIT 184
Query: 228 LYQALESLTSFS--IQNSNLTTVSEKFVLTFTS 258
+ E++ +++ NL ++ F +FTS
Sbjct: 185 CSKKRETMVQLCKVLESLNLNILTTNFS-SFTS 216
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 68 NGDANGGVQEEDNDGDDSSGRARXXXXXXX-XXXXVDXXXXXXXXXXXXGKMKEKLYALR 126
N D GG + D G D SG R + K+ ++ YALR
Sbjct: 394 NSDGEGGGEWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALR 453
Query: 127 ALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTE 161
++VPNI+KMDKAS++GDAV Y+ +L K K ++ E
Sbjct: 454 SVVPNISKMDKASLLGDAVSYINELHAKLKVMEAE 488
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 145 (56.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 41/141 (29%), Positives = 75/141 (53%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
K+ + YALRA+VP +++MDKAS++ DAV Y++ L+ K L+TEI ++ +T ++ D
Sbjct: 260 KLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMK--MTETDKLD 317
Query: 177 QESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEER--G--FYVRLVCSKGEGVAVSLYQAL 232
S+ NT + V + N K + +V+ + G +R+ +L AL
Sbjct: 318 NSSS-NTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAIIRVQTENVNHPTSALMSAL 376
Query: 233 ESLTSFSIQNSNLTTVSEKFV 253
+ +Q++N + +S+ V
Sbjct: 377 MEMDC-RVQHANASRLSQVMV 396
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 52/192 (27%), Positives = 87/192 (45%)
Query: 61 GEDMFGLNGDANGGVQEEDND---GDDSSGRARXXXXXXXXXXXVDX-----XXXXXXXX 112
G+D GL+ DA+GG+ + D G+DS +
Sbjct: 284 GDDD-GLSIDASGGLNYDSEDARGGEDSGAKKESNANSTVTGDGKGKKKGMPAKNLMAER 342
Query: 113 XXXGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEA--SL- 169
K+ ++LY LR++VP I+KMD+ASI+GDA+ Y+++L K L+ E+ A SL
Sbjct: 343 RRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQNELESSPATSSLP 402
Query: 170 -TGAERQDQESTGNTKKTRVRSKKNPTC--KKIMQMGVFQV---EERGFYVRLVCSKGEG 223
T T T +R++ + P+ Q +V E R + + C++ G
Sbjct: 403 PTPTSFHPLTPTLPTLPSRIKEEICPSALPSPTGQQPRVEVRLREGRAVNIHMFCARRPG 462
Query: 224 VAVSLYQALESL 235
+ +S +A+E L
Sbjct: 463 LLLSAMRAVEGL 474
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 143 (55.4 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 26/54 (48%), Positives = 42/54 (77%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLT 170
K+ ++ YALR++VPNI+KMDKAS++GDA+ Y+++LQ K K ++ E + SL+
Sbjct: 406 KLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSLS 459
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 140 (54.3 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 41/122 (33%), Positives = 60/122 (49%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
++ ++L LR++VP I+KMD+ SI+GD + YV++L + K L+ EI L
Sbjct: 193 RLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEIGVTPEELDLLNTMK 252
Query: 177 QESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGF---YVRLVCSKGEGVAVSLYQALE 233
S+GN + VR N T F VE RG + + C GV +S ALE
Sbjct: 253 DSSSGNNNEMLVR---NST--------KFDVENRGSGNTRIEICCPANPGVLLSTVSALE 301
Query: 234 SL 235
L
Sbjct: 302 VL 303
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 142 (55.0 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 39/154 (25%), Positives = 76/154 (49%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
K+ ++ YALRA+VPN++KMDKAS++GDA+ Y+ +L+ K L+T+ L++ + +++
Sbjct: 535 KLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALETDKETLQSQMESLKKE- 593
Query: 177 QESTGNTKKTRVRSKKNPTCKKI-MQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESL 235
+ C + ++ + +E +R+ C K A L AL L
Sbjct: 594 -RDARPPAPSGGGGDGGARCHAVEIEAKILGLEAM---IRVQCHKRNHPAARLMTALREL 649
Query: 236 TSFSIQNSNLTTVSEKFV----LTFTSSVRGSDQ 265
+ +++++ V + + + S V DQ
Sbjct: 650 -DLDVYHASVSVVKDLMIQQVAVKMASRVYSQDQ 682
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 133 (51.9 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 46/212 (21%), Positives = 103/212 (48%)
Query: 67 LNGDANGGVQEEDNDGDDSSGRARXXXXXXXXXXXVDXXXXXXXXXXXXGKMKEKLYALR 126
LN GG +E+ +DG++ + + G++ ++ALR
Sbjct: 29 LNFGGGGGGEEDGDDGEEEQQQQQAAAAAMGKEFK---SKNLEAERRRRGRLNGNIFALR 85
Query: 127 ALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQDQESTGNTKKT 186
A+VP ITKM K + + DA+ ++++LQ + +L+ ++ D + E +++ + + ++
Sbjct: 86 AVVPKITKMSKEATLSDAIEHIKNLQNEVLELQRQLGD-----SPGEAWEKQGSASCSES 140
Query: 187 RVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLT 246
V ++ N + Q+ + + + +++ +K G+ + LE+L S+ +Q +L
Sbjct: 141 FVPTE-NAHYQG--QVELISLGSSKYNLKIFWTKRAGLFTKV---LEALCSYKVQVLSLN 194
Query: 247 TVS-----EKFVLTFTSSVRGSDQNMHLTNMK 273
T+S E F FT V+G +Q++ + ++
Sbjct: 195 TISFYGYAESF---FTIEVKG-EQDVVMVELR 222
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 134 (52.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 39/145 (26%), Positives = 73/145 (50%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQ---------MKAKKLKTEIADLEA 167
K+ ++ AL AL+P + KMDKAS++GDA+ +++ LQ K K +++ + ++
Sbjct: 137 KLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLVKKS 196
Query: 168 SLTGAERQDQESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVS 227
SL E S+ ++ R S N + ++ V +V + ++++C K +G +
Sbjct: 197 SLVLDENHQPSSSSSSDGNRNSSSSN-----LPEIEV-RVSGKDVLIKILCEKQKGNVIK 250
Query: 228 LYQALESLTSFSIQNSNLTTVSEKF 252
+ +E L SI NSN+ F
Sbjct: 251 IMGEIEKL-GLSITNSNVLPFGPTF 274
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTE 161
K+ ++ YALRA+VPNI+KMDKAS++ DA+ Y+ D+Q K + +TE
Sbjct: 331 KLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETE 375
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 134 (52.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 39/157 (24%), Positives = 76/157 (48%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTE---IADLEASLTGAE 173
K+ E+L AL AL+P + K DKA+++ DA+ +++ LQ + KKL+ E ++ S+ +
Sbjct: 143 KLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVTKKMDQSIILVK 202
Query: 174 RQ----DQESTGNTKKTRVRSKKNPTC------KKIMQMGVFQVEERGFYVRLVCSKGEG 223
R D +S+ + S + + K+ M M +V +R +R+ C K +G
Sbjct: 203 RSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRDLLIRVHCEKNKG 262
Query: 224 VAVSLYQALESLTSFSIQNSNLTTVSEKFVLTFTSSV 260
+ + +LE + + L + V+T + +
Sbjct: 263 CMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKM 299
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 136 (52.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLE-ASL--TGAE 173
K+ ++LY LR++VP I+KMD+ASI+GDA+ Y+++L + L E+ SL T +
Sbjct: 318 KLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSS 377
Query: 174 RQDQESTGNTKKTRVRSKKNPTC---KKIMQMGV-FQVEE-RGFYVRLVCSKGEGVAVSL 228
T T RV+ + P+ K Q V ++ E R + + C + G+ ++
Sbjct: 378 FHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLAT 437
Query: 229 YQALESL 235
+AL++L
Sbjct: 438 MKALDNL 444
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 58 GSTGEDMFGLNGDANGGVQEEDNDGDDSSGR 88
G+ G ++ LNG GG +EE+ +G S GR
Sbjct: 5 GNNGGGVW-LNG--GGGEREENEEG--SWGR 30
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 36/137 (26%), Positives = 68/137 (49%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
K+ + YALRA+VPN++KMDK S++ DAV Y+ +L+ KA+ ++ E +E +
Sbjct: 354 KLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIEIQFN----EL 409
Query: 177 QESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLT 236
+E G K ++M++ V +E VR+ K L AL L
Sbjct: 410 KEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRVESRKDHHPGARLMNALMDL- 468
Query: 237 SFSIQNSNLTTVSEKFV 253
+ +++++ +++ +
Sbjct: 469 ELEVNHASISVMNDLMI 485
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 45/174 (25%), Positives = 85/174 (48%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIA--DLEASLTGAER 174
K+ ++ AL +VP + KMDKAS++GDA+ YV+ LQ + K L+ E +EA++ +
Sbjct: 192 KLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRPVEAAVLVKKS 251
Query: 175 QDQESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALES 234
Q + + ++ +V ER V++ C +G ++ +E+
Sbjct: 252 QLSADDDDGSSCDENFDGGEATAGLPEIEA-RVSERTVLVKIHCENRKGALITALSEVET 310
Query: 235 LTSFSIQNSN-LTTVSEKFVLTFTSSVRGSDQNMHLTNMKLWVTKALVNQGFEV 287
+ +I N+N L S +T ++ + +N L+ +K V K +NQ F++
Sbjct: 311 I-GLTIMNTNVLPFTSSSLDITIMAT---AGENFSLS-VKDIVKK--LNQAFKL 357
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 131 (51.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
++ ++L LR++VP I+KMD+ SI+GD + YV++L + K L+ E A ++S + E
Sbjct: 207 RLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAATGDSSSSSTENLS 266
Query: 177 QESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEER---GFYVRLVCSKGEGVAVSLYQALE 233
NT K S I F+VE R + + C+ + S ALE
Sbjct: 267 MLKL-NTLKPPPSSSSGEETPLIRNSTRFEVERRENGSTRIEMACAAIPELLPSTLAALE 325
Query: 234 SL 235
+L
Sbjct: 326 AL 327
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 128 (50.1 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 41/160 (25%), Positives = 78/160 (48%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
K+ ++ L ++P + KMDKA+I+GDAV YV++LQ K K L+ E + A
Sbjct: 178 KINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEE----DGGGRPAAMVV 233
Query: 177 QESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLT 236
++S+ + +++ ++ ++ V +V ER VR+ C G+ V L +E L
Sbjct: 234 RKSSCSGRQSAAGDGDGEG--RVPEIEV-RVWERSVLVRVQCGNSRGLLVRLLSEVEELR 290
Query: 237 SFSIQNSNLTTVSEKFVLTFTSSVRGSDQNMHLTNMKLWV 276
S + + ++T T+ + S + H + L++
Sbjct: 291 LGITHTSVMPFPASTVIITITA--KASSLSNHPALLCLYI 328
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 47/172 (27%), Positives = 85/172 (49%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
++ ++L LR++VP I+KMD+ SI+GDA+ Y+++L K KL+ E +L S
Sbjct: 189 RLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQELGNSNNS---HH 245
Query: 177 QESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVR--LVCSKGEGVAVSLYQALES 234
+ G+ K P + + F+++ R R + CS G+ +S LE+
Sbjct: 246 SKLFGDLKDLNANE---PLVRNSPK---FEIDRRDEDTRVDICCSPKPGLLLSTVNTLET 299
Query: 235 LTSFSIQNSNLTTVSEKFVLTFTSSVRGSDQNMHLTNMKLWVTKALV-NQGF 285
L I+ ++ S+ F L + S G++Q +T+ + +AL N G+
Sbjct: 300 L-GLEIEQCVISCFSD-FSLQASCS-EGAEQRDFITSED--IKQALFRNAGY 346
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 124 (48.7 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 24/61 (39%), Positives = 43/61 (70%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKT--EIADLEASLTGAER 174
K+ E+ LR+++P+I+K+DK SI+ D + Y+QDLQ + ++L++ E AD E +T +R
Sbjct: 416 KLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTETRITMMKR 475
Query: 175 Q 175
+
Sbjct: 476 K 476
Score = 41 (19.5 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 24/85 (28%), Positives = 32/85 (37%)
Query: 5 AYPMMQNKDFEL----HD-FIDDPNIDQFIDL-IQGENEILEPSFGCTFVSECIVDNQIG 58
A+P FE HD FI+D Q GE EI S+C+ +G
Sbjct: 237 AFPTTSTSGFEQEPEDHDSFINDGGASQVQSWQFVGE-EISNCIHQSLNSSDCVSQTFVG 295
Query: 59 STGE---DMFGLNGDANGGVQEEDN 80
+TG D G +QE+ N
Sbjct: 296 TTGRLACDPRKSRIQRLGQIQEQSN 320
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
K+ EK AL AL+P + K DK +I+ DA+ ++ LQ + + LK E EA+ RQ
Sbjct: 130 KLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEE---KEAT-----RQ- 180
Query: 177 QESTGNTKKTRVRSKKNP--TCKKIMQMGVFQ--------VEERGFYVRLVCSKGEGVAV 226
ES KK++V + P +C + + Q + + +R++C K +G +
Sbjct: 181 MESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKGCMI 240
Query: 227 SLYQALESLTSFSIQNS 243
++ +E+ I+NS
Sbjct: 241 NILNTIENF-QLRIENS 256
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 40/168 (23%), Positives = 82/168 (48%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIAD--LEASLTGAER 174
K+ ++ AL ALVP + KMDKAS++GDA+ +++ LQ + +L+ + + LE S+ ++
Sbjct: 163 KLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRLE-SMVLVKK 221
Query: 175 QDQESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALES 234
N + + + + ++ V + + ++++C K +G + +E
Sbjct: 222 SKLILDDNNQSFSSSCEDGFSDLDLPEIEV-RFSDEDVLIKILCEKQKGHLAKIMAEIEK 280
Query: 235 LTSFSIQNSNLTTVSEKFVLTFTSSVRGSDQNMHLTNMKLWVTKALVN 282
L I NS++ +T + + SD +M L ++ + AL N
Sbjct: 281 L-HILITNSSVLNFGPTLDITIIAK-KESDFDMTLMDVVKSLRSALSN 326
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 115 (45.5 bits), Expect = 0.00024, P = 0.00024
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIAD--LEASL-TGAE 173
K+ ++ L A++P + KMDKA+I+ DA Y+++LQ K K L+ + A EA++ T +
Sbjct: 141 KINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQAAARVTEAAMATPSP 200
Query: 174 RQDQESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALE 233
+ + VR +PT +M VR+ C GEGV V + +E
Sbjct: 201 ARAMNHLPVPPEIEVRC--SPTNNVVM-------------VRIHCENGEGVIVRILAEVE 245
Query: 234 SLTSFSIQNSNL 245
+ I N+N+
Sbjct: 246 EI-HLRIINANV 256
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 40/141 (28%), Positives = 74/141 (52%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
++ ++L LR++VP ITKMD+ SI+GDA+ Y+++L K KL+ + +L ++ +
Sbjct: 162 RLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQELGSNSHLSTLIT 221
Query: 177 QES-TGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESL 235
ES N+ K V ++ T + + + G V V S E + + + Q + S
Sbjct: 222 NESMVRNSLKFEVDQREVNT-----HIDICCPTKPGLVVSTV-STLETLGLEIEQCVISC 275
Query: 236 TS-FSIQNSNLTTVSEKFVLT 255
S FS+Q S +++++T
Sbjct: 276 FSDFSLQASCFEVGEQRYMVT 296
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 113 (44.8 bits), Expect = 0.00083, P = 0.00083
Identities = 32/138 (23%), Positives = 68/138 (49%)
Query: 117 KMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQD 176
K+KE L+++VP+I K+DKASI+ + + Y+++L+ + ++L++ + R+
Sbjct: 255 KLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELESSSQPSPRPMETTRRRC 314
Query: 177 QESTGNTKKTRVRSKKNPTCKK---------IMQMGVFQVEERGFYVRLVCSKGEGVAVS 227
+STG R+K+ + + + V ++ + + L C E +
Sbjct: 315 CKSTGKKVSAGARAKRKAPAPEDTDGERRHCVSNVNVTIMDNKELLLELQCQWKELLMTR 374
Query: 228 LYQALE--SLTSFSIQNS 243
++ A++ SL S+Q S
Sbjct: 375 VFDAIKGVSLDVLSVQAS 392
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 293 270 0.00097 114 3 11 23 0.39 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 591 (63 KB)
Total size of DFA: 176 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.90u 0.24s 22.14t Elapsed: 00:00:01
Total cpu time: 21.91u 0.24s 22.15t Elapsed: 00:00:01
Start: Tue May 21 01:59:18 2013 End: Tue May 21 01:59:19 2013