BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042663
(293 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 286 bits (731), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/307 (54%), Positives = 211/307 (68%), Gaps = 36/307 (11%)
Query: 13 DFELHDFIDDPNIDQFIDLIQG------ENEILEPSFGCTFVSECIVD-NQ-IGSTGEDM 64
D ELH+F+ DPN DQFI+LI+G EN +L+ G S C +D NQ I + +D+
Sbjct: 13 DLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFIDENQFIPTPVDDL 72
Query: 65 F---------------GLNGD---ANGGVQEED-NDGDDSSGRARTTTTKCTKKPKVDRS 105
F +GD A G EED NDGDDSS A TT T+K K DRS
Sbjct: 73 FDELPDLDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSS--ATTTNNDGTRKTKTDRS 130
Query: 106 RALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADL 165
R LISERRRRG+MK+KLYALR+LVPNITKMDKASIVGDAVLYVQ+LQ +AKKLK++IA L
Sbjct: 131 RTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGL 190
Query: 166 EASL--TGAERQDQESTGNTKKTR-VRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGE 222
EASL TG QE + +KT+ R P KKI+QM V QVEE+GFYVRLVC+KGE
Sbjct: 191 EASLNSTGGY---QEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGFYVRLVCNKGE 247
Query: 223 GVAVSLYQALESLTSFSIQNSNLTTVS-EKFVLTFTSSVRGSDQNMHLTNMKLWVTKALV 281
GVA SLY++LESLTSF +QNSNL++ S + ++LT+T +Q+++L N+KLW+T +L+
Sbjct: 248 GVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTCFEQSLNLPNLKLWITGSLL 307
Query: 282 NQGFEVL 288
NQGFE +
Sbjct: 308 NQGFEFI 314
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 95/152 (62%), Gaps = 8/152 (5%)
Query: 105 SRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIAD 164
S+ ++SER RR K+ ++L+ALR++VPNITKMDKASI+ DA+ Y++ LQ + KKL+ EI +
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 165 LE----ASLTGAERQDQE---STGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLV 217
LE +SL+ ++ D++ + K ++ S + + +++++ V + ER V +
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVT 173
Query: 218 CSKGEGVAVSLYQALESLTSFSIQNSNLTTVS 249
C+K V L + ESL + I SNLT+ S
Sbjct: 174 CNKRTDTMVKLCEVFESL-NLKILTSNLTSFS 204
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 94/163 (57%), Gaps = 21/163 (12%)
Query: 104 RSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIA 163
+++ L++ERRRR K+ ++LYALR+LVP ITK+D+ASI+GDA+ YV++LQ +AK+L+ E+
Sbjct: 312 QAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELE 371
Query: 164 DLEASLTGAER-QDQESTGNTKKTRVR-----SKKNPTCKKIM--------------QMG 203
+ + G+ R Q S T T + P+ K+ + Q+
Sbjct: 372 ENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVD 431
Query: 204 VFQVEERGFYVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLT 246
V Q++ R F+V+++C G L +AL+SL + N+N T
Sbjct: 432 VAQLDGREFFVKVICEYKPGGFTRLMEALDSL-GLEVTNANTT 473
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 93/170 (54%), Gaps = 29/170 (17%)
Query: 105 SRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIAD 164
S+ ++SER RR K+ ++L+ALR++VPNI+K+DKAS++ D++ Y+Q+L + K L+ EI +
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 165 LEASLTGAERQDQESTGNTKKTRV---------RSKK------------NPTCKKIMQMG 203
LE+ T E ++ N +T + RSKK P ++++M
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPI--EVLEMK 170
Query: 204 VFQVEERGFYVRLVCSKGEGVAVSLYQALESL------TSFSIQNSNLTT 247
V + E+ V + CSK V L + LESL T+FS S L+T
Sbjct: 171 VTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLST 220
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 68 NGDANGGVQEEDNDGDDSSGRARTTTTKCTKKPKVDRSRALI---SERRRRGKMKEKLYA 124
N D GG + D G D SG R K ++P R+ AL +ER+RR K+ ++ YA
Sbjct: 394 NSDGEGGGEWADAVGADESGNNRPR--KRGRRPANGRAEALNHVEAERQRREKLNQRFYA 451
Query: 125 LRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGAERQDQESTGNTK 184
LR++VPNI+KMDKAS++GDAV Y+ +L K K ++ E
Sbjct: 452 LRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAE----------------------- 488
Query: 185 KTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLYQALESLTSFSIQNSN 244
+ R+ NP + V Q VR+ C A ++ A E + + NSN
Sbjct: 489 RERLGYSSNPPISLDSDINV-QTSGEDVTVRINCPLESHPASRIFHAFEE-SKVEVINSN 546
Query: 245 LTTVSEKFVLTFT 257
L + + TF
Sbjct: 547 LEVSQDTVLHTFV 559
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 94/162 (58%), Gaps = 8/162 (4%)
Query: 98 KKPKVDRSRALI---SERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMK 154
+KP R L +ER+RR K+ ++ Y+LRA+VPN++KMDKAS++GDA+ Y+ +L+ K
Sbjct: 404 RKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSK 463
Query: 155 AKKLKTEIADLEASLTGAERQ--DQESTGNTKKTRVRSKKNPTCKKI-MQMGVFQVEERG 211
++ +++ +++ L G ++ + + G+ K R S ++ T I M++ V ++
Sbjct: 464 LQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDV-KIIGWD 522
Query: 212 FYVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLTTVSEKFV 253
+R+ C K + +AL+ L + +++L+ V++ +
Sbjct: 523 VMIRVQCGKKDHPGARFMEALKEL-DLEVNHASLSVVNDLMI 563
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 8/137 (5%)
Query: 105 SRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIAD 164
++ L++ERRRR K+ ++LY LR++VP I+KMD+ASI+GDA+ Y+++L + L TE+
Sbjct: 266 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 165 LEASLTGAERQDQESTGNTKKTRVRSKKNPTCKKIMQMG------VFQVEERGFYVRLVC 218
S + T T RV+ + P+ G V E + + + C
Sbjct: 326 TPPS--SSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFC 383
Query: 219 SKGEGVAVSLYQALESL 235
+ G+ +S +AL++L
Sbjct: 384 GRRPGLLLSTMRALDNL 400
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 94/163 (57%), Gaps = 14/163 (8%)
Query: 98 KKPKVDRSRALI---SERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMK 154
+KP R L +ER+RR K+ ++ Y+LRA+VPN++KMDKAS++GDA+ Y+ +L+ K
Sbjct: 405 RKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSK 464
Query: 155 AKKLKTEIADLEASLTGAERQDQESTGNTKKTRVRSKK--NPTCKKIMQMGVFQVEERGF 212
+K +++ +L+ + ++ GN K + V+ +K N +++M V V+ G+
Sbjct: 465 LQKAESDKEELQKQIDVMNKE----AGNAKSS-VKDRKCLNQESSVLIEMEV-DVKIIGW 518
Query: 213 --YVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLTTVSEKFV 253
+R+ CSK +AL+ L + +++L+ V++ +
Sbjct: 519 DAMIRIQCSKRNHPGAKFMEALKEL-DLEVNHASLSVVNDLMI 560
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 104 RSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTE-- 161
+S+ L SER+RR ++ + +Y LRA+VP ITK++K I DAV Y+ +L ++ +KL+ E
Sbjct: 262 KSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELK 321
Query: 162 -IADLEASLTGAERQDQESTGNTKKTRVRSKKNPTCKK-IMQMGVFQVEERGFYVRLVCS 219
I ++E AE +Q + + + RV SK N KK +++ V + ER F +R+V
Sbjct: 322 GINEMECKEIAAE--EQSAIADPEAERVSSKSNKRVKKNEVKIEVHETGERDFLIRVVQE 379
Query: 220 KGEGVAVSLYQALESLTSFSIQNSNLTTV 248
+ L +A++ L I + N T +
Sbjct: 380 HKQDGFKRLIEAVD-LCELEIIDVNFTRL 407
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 14/142 (9%)
Query: 105 SRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIAD 164
++ L++ERRRR K+ ++LY LR++VP I+KMD+ASI+GDA+ Y+++L + L E
Sbjct: 306 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE--- 362
Query: 165 LEASLTGAERQDQES------TGNTKKTRVRSKKNPTC-----KKIMQMGVFQVEERGFY 213
LE++ G+ S T T RV+ + P+ + ++ V E R
Sbjct: 363 LESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVN 422
Query: 214 VRLVCSKGEGVAVSLYQALESL 235
+ + C + G+ ++ +AL++L
Sbjct: 423 IHMFCGRRPGLLLATMKALDNL 444
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 25/172 (14%)
Query: 95 KCTKKPKVDRSRALI---SERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDL 151
K +KP R L +ER+RR K+ ++ YALRA+VPN++KMDKAS++GDA+ Y+ +L
Sbjct: 438 KRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINEL 497
Query: 152 QMKAKKLKTEIADL-------EASLTGAERQDQESTGNTKKTRVRSKKNPTCKKIMQMGV 204
K+K +KTE L E L A R+ S G+ +C I +G+
Sbjct: 498 --KSKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSS---------SCSSIKPVGM 546
Query: 205 -FQVEERGF--YVRLVCSKGEGVAVSLYQALESLTSFSIQNSNLTTVSEKFV 253
+V+ G+ +R+ SK A L AL L + +++++ V++ +
Sbjct: 547 EIEVKIIGWDAMIRVESSKRNHPAARLMSALMDL-ELEVNHASMSVVNDLMI 597
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 98 KKPKVDRSRALI---SERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMK 154
+KP R L +ER+RR K+ ++ YALR++VPNI+KMDKAS++GDA+ Y+++LQ K
Sbjct: 384 RKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEK 443
Query: 155 AKKLKTEIADLEASLT 170
K ++ E + SL+
Sbjct: 444 VKIMEDERVGTDKSLS 459
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 98 KKPKVDRSRAL---ISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMK 154
+KP R AL +ER+RR K+ ++ YALRA+VPNI+KMDKAS++ DA+ Y+ D+Q K
Sbjct: 309 RKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKK 368
Query: 155 AKKLKTE 161
+ +TE
Sbjct: 369 IRVYETE 375
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 104 RSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIA 163
+S L +ERRRR K+ +L ALR+ VP +T M KASIV DA+ Y+ +LQ K L
Sbjct: 30 KSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFH 89
Query: 164 DLEASLTGAERQDQESTGNTKKTRVR-SKKNPTCKKI---MQMGVFQVEERGFYVRLVCS 219
++E + D+E T K V S N KK+ + + ++ ER F+++++
Sbjct: 90 EMEEA---PPEIDEEQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKIITE 146
Query: 220 KGEGVAVSLYQALESLTSFSIQNSNLTT 247
K +G+ + + L F I + +LTT
Sbjct: 147 KRDGIFTKFMEVMRFL-GFEIIDISLTT 173
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 82 GDDSSGRARTTTTKCTKKPKVDRSRALIS----ERRRRGKMKEKLYALRALVPNITKMDK 137
G + R + TT+ K A++S E++RR K+ + YALRA+VP +++MDK
Sbjct: 221 GSERKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDK 280
Query: 138 ASIVGDAVLYVQDLQMKAKKLKTEIADLEASLT 170
AS++ DAV Y++ L+ K L+TEI ++ + T
Sbjct: 281 ASLLSDAVSYIESLKSKIDDLETEIKKMKMTET 313
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 25/143 (17%)
Query: 94 TKCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQM 153
TK + P+ D S +++ERRRR K+ EK LR++VP +TKMDK SI+GD + YV L+
Sbjct: 352 TKDKRLPREDLSH-VVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRK 410
Query: 154 KAKKLKTEIADLEASLTGAERQDQESTGNTKKTRVRSKKNPTCKKIMQMGV-FQVEERGF 212
+ +L+ T E+Q K+TR TCK+ V + E
Sbjct: 411 RVHELEN---------THHEQQH-------KRTR-------TCKRKTSEEVEVSIIENDV 447
Query: 213 YVRLVCSKGEGVAVSLYQALESL 235
+ + C +G+ + + Q L L
Sbjct: 448 LLEMRCEYRDGLLLDILQVLHEL 470
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 87 GRARTTTTKCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVL 146
G R T + T+ P + + L +ER+RR K+ EK AL AL+P + K DK +I+ DA+
Sbjct: 101 GTKRKTCSHGTRSPVLAKEHVL-AERKRREKLSEKFIALSALLPGLKKADKVTILDDAIS 159
Query: 147 YVQDLQMKAKKLKTEIADLEASLTGAERQDQESTGNTKKTRVRSKKNP--TCKKIMQMGV 204
++ LQ + + LK E A RQ ES KK++V + P +C + +
Sbjct: 160 RMKQLQEQLRTLKEE--------KEATRQ-MESMILVKKSKVFFDEEPNLSCSPSVHIEF 210
Query: 205 FQ--------VEERGFYVRLVCSKGEGVAVSLYQALESLTSFSIQNS 243
Q + + +R++C K +G +++ +E+ I+NS
Sbjct: 211 DQALPEIEAKISQNDILIRILCEKSKGCMINILNTIENF-QLRIENS 256
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 110 SERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASL 169
+ER RR K+ + YALRA+VPN++KMDK S++ DAV Y+ +L+ KA+ ++ E +E
Sbjct: 347 AERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIEIQF 406
Query: 170 TGAERQDQESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYVRLVCSKGEGVAVSLY 229
+ +E G K ++M++ V +E VR+ K L
Sbjct: 407 N----ELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRVESRKDHHPGARLM 462
Query: 230 QALESL 235
AL L
Sbjct: 463 NALMDL 468
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Query: 109 ISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKT--EIADLE 166
+SE++RR K+ E+ LR+++P+I+K+DK SI+ D + Y+QDLQ + ++L++ E AD E
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 167 ASLTGAERQ 175
+T +R+
Sbjct: 468 TRITMMKRK 476
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
Query: 75 VQEEDNDGDDSSGRARTTT-TKCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNIT 133
V+EE DG +G +RT +K ++ +V +SERRRR ++ EK+ AL+ L+PN
Sbjct: 319 VEEESGDGRKEAGPSRTGLGSKRSRSAEVHN----LSERRRRDRINEKMRALQELIPNCN 374
Query: 134 KMDKASIVGDAVLYVQDLQMKAK 156
K+DKAS++ +A+ Y++ LQ++ +
Sbjct: 375 KVDKASMLDEAIEYLKSLQLQVQ 397
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 108 LISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTE------ 161
+++ER+RR K+ E+L AL AL+P + K DKA+++ DA+ +++ LQ + KKL+ E
Sbjct: 134 VLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVTKK 193
Query: 162 -------IADLEASLTGAERQDQESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERGFYV 214
+ + L + S + K+ M M +V +R +
Sbjct: 194 MDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRDLLI 253
Query: 215 RLVCSKGEGVAVSLYQALES-----LTSFSIQNSNLTTV 248
R+ C K +G + + +LE + SF++ N T V
Sbjct: 254 RVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLV 292
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 9/95 (9%)
Query: 73 GGVQEED-----NDGDDSSGRARTTTTKCTKKPKVDRSRAL----ISERRRRGKMKEKLY 123
G ++EE+ N+ DD S A+T T+KP R R+ + ER+RR + +K+
Sbjct: 191 GDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMR 250
Query: 124 ALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKL 158
AL+ L+PN K DKAS++ +A+ Y++ LQ++ + +
Sbjct: 251 ALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM 285
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 32/181 (17%)
Query: 89 ARTTTTKCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYV 148
T + KK + S+ L++ERRRR ++ ++L LR++VP ITKMD+ SI+GDA+ Y+
Sbjct: 134 GETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYM 193
Query: 149 QDLQMKAKKLKTEIADLEASLTGAERQDQESTGNTKKTRVRSKKNPTCKKIMQMGVFQVE 208
++L K KL+ + +L ++ ST T ++ VR+ F+V+
Sbjct: 194 KELLDKINKLQEDEQELGSN-------SHLSTLITNESMVRNSLK-----------FEVD 235
Query: 209 ER--GFYVRLVCSKGEGVAVSLYQALESL------------TSFSIQNSNLTTVSEKFVL 254
+R ++ + C G+ VS LE+L + FS+Q S +++++
Sbjct: 236 QREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMV 295
Query: 255 T 255
T
Sbjct: 296 T 296
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 41/54 (75%)
Query: 108 LISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTE 161
+I+ER+RR K+ ++ AL ALVP + KMDKAS++GDA+ +++ LQ + +L+ +
Sbjct: 154 IIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQ 207
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 36/45 (80%)
Query: 108 LISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQ 152
+++ER+RR K+ ++ AL AL+P + KMDKAS++GDA+ +++ LQ
Sbjct: 128 ILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQ 172
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 39/50 (78%)
Query: 109 ISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKL 158
+SE+RRR ++ EK+ AL++L+PN K DKAS++ +A+ Y++ LQ++ + L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 92 TTTKCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDL 151
T K +KK + S+ L++ERRRR ++ ++L LR++VP I+KMD+ SI+GDA+ Y+++L
Sbjct: 164 TNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKEL 223
Query: 152 QMKAKKLKTEIADLEASLTGAERQDQESTGNTKKTRVRSKKNPTCKKIMQMGVFQVEERG 211
K KL+ E +L S + + + +P F+++ R
Sbjct: 224 LDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPK---------FEIDRRD 274
Query: 212 FYVR--LVCSKGEGVAVSLYQALESL 235
R + CS G+ +S LE+L
Sbjct: 275 EDTRVDICCSPKPGLLLSTVNTLETL 300
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 38/50 (76%)
Query: 109 ISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKL 158
+SE++RR K+ EK+ AL+ L+PN K DKAS++ +A+ Y++ LQ++ + L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 80 NDGDDSSGRARTTTTKCTKKPKVDRSRALISE------RRRRGKMKEKLYALRALVPNIT 133
N DD + T + K K +R + S+ R+RR ++ ++L L++LVPN T
Sbjct: 110 NSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGT 169
Query: 134 KMDKASIVGDAVLYVQDLQMKAKKLKTE 161
K+D ++++ DAV YV+ LQ++ K L +E
Sbjct: 170 KVDISTMLEDAVHYVKFLQLQIKLLSSE 197
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 104 RSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLK 159
+SR +ER RR ++ + L+ L+PN TK+D+ASIVG+A+ Y+++L ++ K
Sbjct: 245 KSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFK 300
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 72 NGGVQEEDNDGDDSSGRARTTTTKCTK-KPKVDRSRAL------ISERRRRGKMKEKLYA 124
+GG +G G TT+ + KP+V R I+ER RR ++ E++ +
Sbjct: 68 SGGPTMGSQEGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKS 127
Query: 125 LRALVPNITKMDKASIVGDAVLYVQDLQMKAKKL 158
L+ LVPN K DKAS++ + + YV+ LQ++ K L
Sbjct: 128 LQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 87 GRARTTTTKCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVL 146
R TT+TK ++ +V +SER+RR ++ E++ AL+ L+P K DKAS++ +A+
Sbjct: 273 ARVSTTSTKRSRAAEVHN----LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIE 328
Query: 147 YVQDLQMKAKKL 158
Y++ LQ++ + +
Sbjct: 329 YMKSLQLQIQMM 340
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 95 KCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMK 154
+ T P + + +ISER+RR K+ E ALR+L+P TK DKAS++ A + LQ +
Sbjct: 278 RYTSGPSATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGE 337
Query: 155 AKKLKTEIADLEASLTGAERQDQESTGNTKKTRVRSKKNP 194
KL ++EA L G ER+ + ++ VR + P
Sbjct: 338 ISKLLERNREVEAKLAG-EREIENDLRPEERFNVRIRHIP 376
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 29/161 (18%)
Query: 109 ISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKT--EIADLE 166
+ E++RR K+ E+ LR ++P+I K+DK SI+ D + Y+Q+L+ + ++L++ E D E
Sbjct: 444 VLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTDTE 503
Query: 167 ASLT----------GAERQD----QESTGNTKKTRVRS--KKNPTCKKI------MQMGV 204
T ER TGN KK V + + P +++G
Sbjct: 504 TRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVGEAEPADTGFTGLTDNLRIGS 563
Query: 205 FQVEERGFYVRLVCSKGEGVAVSLYQALE--SLTSFSIQNS 243
F E + L C+ EGV + + + L S S+Q+S
Sbjct: 564 FGNE---VVIELRCAWREGVLLEIMDVISDLHLDSHSVQSS 601
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 75 VQEEDNDGDDSSGRARTTTTKCTKKPKVDRSRALI----SERRRRGKMKEKLYALRALVP 130
+EE N + + AR +T+ RSRA I SERRRR K+ E + AL+ L+P
Sbjct: 253 TREETNVENQGTEEARDSTSS-------KRSRAAIMHKLSERRRRQKINEMMKALQELLP 305
Query: 131 NITKMDKASIVGDAVLYVQDLQ 152
TK D++S++ D + YV+ LQ
Sbjct: 306 RCTKTDRSSMLDDVIEYVKSLQ 327
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 66/145 (45%), Gaps = 23/145 (15%)
Query: 59 STGEDMFGLNGDANGGVQEEDNDGDDSSGRARTTTTKCTK----KPKVDRSRAL------ 108
STG F L + G Q + S A TT T KPKV R
Sbjct: 89 STGSLPFHLPQGSGGQTQTQ------SQATASATTGGATAQPQTKPKVRARRGQATDPHS 142
Query: 109 ISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEAS 168
I+ER RR ++ E++ +L+ LVPN K DKAS++ + + YV+ LQ++ K L AS
Sbjct: 143 IAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAS 202
Query: 169 LT-------GAERQDQESTGNTKKT 186
+ G ++ S+G K T
Sbjct: 203 ASSQISEDAGGSHENTSSSGEAKMT 227
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 40/221 (18%)
Query: 74 GVQEEDNDGDD------SSGRARTTTTKCTKKPKVDRSRALISERRRRGKMKEKLYALRA 127
G +EED + + S R R T+K +++ + R + ER RR +M E L LR+
Sbjct: 160 GGEEEDRENKNVTKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRS 219
Query: 128 LVPN--ITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEASLTGA------------- 172
L+P + + D+ASI+G A+ +V++L+ + L+++ TG
Sbjct: 220 LMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPI 279
Query: 173 -----ERQDQESTGNTKK------TRVRSKKNPTCKKIMQMGVFQVEERGF--YVRLVCS 219
+ Q TGN + R + +N +C + +V+ GF ++++
Sbjct: 280 TTVANQAQPLIITGNVTELEGGGGLREETAENKSC-----LADVEVKLLGFDAMIKILSR 334
Query: 220 KGEGVAVSLYQALESLTSFSIQNSNLTTVSEKFVLTFTSSV 260
+ G + ALE L SI ++N+TT+ + + +F +
Sbjct: 335 RRPGQLIKTIAALEDL-HLSILHTNITTMEQTVLYSFNVKI 374
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 41/53 (77%)
Query: 108 LISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKT 160
++SER+RR K+ E L++L+P+I +++KASI+ + + Y+++LQ + ++L++
Sbjct: 418 VMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELES 470
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 41/53 (77%)
Query: 108 LISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKT 160
++SER+RR K+ E L++L+P+I +++KASI+ + + Y+++LQ + ++L++
Sbjct: 420 VMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELES 472
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 77 EEDNDGDDSSGRARTTTTKCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMD 136
EE+N+ DD R + +KK K+ +ER RR K++ L+ L+PN TK D
Sbjct: 196 EENNNLDDGLNR----KGRGSKKRKI-----FPTERERRVHFKDRFGDLKNLIPNPTKND 246
Query: 137 KASIVGDAVLYVQDL 151
+ASIVG+A+ Y+++L
Sbjct: 247 RASIVGEAIDYIKEL 261
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 109 ISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLKTEIADLEAS 168
I+ER RR ++ E++ AL+ LVPN K DKAS++ + + YV+ LQ++ K L AS
Sbjct: 151 IAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAS 210
Query: 169 LTGAERQDQESTGNTKKTRV 188
++ + S GN V
Sbjct: 211 VSSQISEAGGSHGNASSAMV 230
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 85 SSGRARTTTTKCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDA 144
SSG T K T PK +S ++ + RR ++ E+L L+ LVPN TK+D +++ A
Sbjct: 187 SSGVTGKTKPKPTTSPKDPQS---LAAKNRRERISERLKILQELVPNGTKVDLVTMLEKA 243
Query: 145 VLYVQDLQMKAKKLKTE 161
+ YV+ LQ++ K L T+
Sbjct: 244 ISYVKFLQVQVKVLATD 260
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 74 GVQEEDNDGDDS-----SGRARTTTTKCTKKPKVD------RSRALISERRRRGKMKEKL 122
G QEE++ G++ G + TT + K + RS+ ++E+RRR K+ E+
Sbjct: 6 GNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERF 65
Query: 123 YALRALVPNI-TKMDKASIVGDAVLYVQDLQMKAKKLK 159
LR L+PN K D AS + + + YVQ LQ K +K +
Sbjct: 66 QILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYE 103
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 77 EEDNDGDDSSGRARTTTTKCTKKPKVDRSRALISE------RRRRGKMKEKLYALRALVP 130
++D G+DSS + + K SR ++ R+RR ++ E+L L+ LVP
Sbjct: 241 DQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVP 300
Query: 131 NITKMDKASIVGDAVLYVQDLQMKAKKLKTE 161
N TK+D ++++ +AV YV+ LQ++ K L ++
Sbjct: 301 NGTKVDISTMLEEAVHYVKFLQLQIKLLSSD 331
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 104 RSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLK 159
+++ +ER RR + E+ AL+ L+P+ +K D+ASI+ D + Y+ +L+ + +LK
Sbjct: 212 KNKPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELK 267
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 98 KKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKA 155
K + RS L +E+RRR ++ L ALR LVPN K+DKA+++ + V++L+ KA
Sbjct: 59 KAESLSRSHRL-AEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKA 115
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 81 DGDDSSGRARTTTTKCTKKPKVDRSRALISERRRRGKMKEKLYALRALVPNITKMDKASI 140
DG+DS T+ ++ D + R+RR ++ E+L L+ LVPN TK+D +++
Sbjct: 224 DGEDSKALNLNGKTRASRGAATDPQS--LYARKRRERINERLRILQHLVPNGTKVDISTM 281
Query: 141 VGDAVLYVQDLQMKAKKLKTE 161
+ +AV YV+ LQ++ K L ++
Sbjct: 282 LEEAVQYVKFLQLQIKLLSSD 302
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 104 RSRALI----SERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQ 152
RSRA SER+RR K+ +++ L+ LVPN +K DKAS++ + + Y++ LQ
Sbjct: 211 RSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 263
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 104 RSRAL----ISERRRRGKMKEKLYALRALVPNITKMDKASIVGDAVLYVQDLQMKAKKLK 159
RSRA ++ERRRR K+ E++ L+ L+P K K S++ D + YV+ L+M+ +
Sbjct: 148 RSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQFM 207
Query: 160 TEIA 163
+A
Sbjct: 208 PHMA 211
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis thaliana GN=BIM1 PE=1 SV=2
Length = 529
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 104 RSRALISERRRRGKMKEKLYALRALVPNI-TKMDKASIVGDAVLYVQDLQMKAKKLKT 160
RS+ +E+RRR K+ ++ LR L+PN K DKAS + + + Y+Q LQ KA K T
Sbjct: 278 RSKHSATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVT 335
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,945,404
Number of Sequences: 539616
Number of extensions: 4056883
Number of successful extensions: 10594
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 10464
Number of HSP's gapped (non-prelim): 267
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)