Query 042664
Match_columns 213
No_of_seqs 119 out of 1057
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 14:32:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042664.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042664hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 3.9E-58 1.3E-62 380.9 19.8 209 4-213 65-276 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 3.3E-57 1.1E-61 369.7 21.1 208 3-213 20-236 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 2.6E-56 8.8E-61 364.8 16.2 203 3-213 18-222 (319)
4 1dcs_A Deacetoxycephalosporin 100.0 5E-54 1.7E-58 350.5 16.0 194 7-213 20-231 (311)
5 3on7_A Oxidoreductase, iron/as 100.0 5.5E-53 1.9E-57 339.5 16.1 198 2-213 11-219 (280)
6 1odm_A Isopenicillin N synthas 100.0 8.3E-53 2.8E-57 346.1 17.0 198 4-213 27-258 (331)
7 3dkq_A PKHD-type hydroxylase S 86.1 3.5 0.00012 31.6 7.9 60 146-211 99-174 (243)
8 2hbt_A EGL nine homolog 1; pro 85.4 9.8 0.00034 29.1 10.2 35 6-41 16-50 (247)
9 3itq_A Prolyl 4-hydroxylase, a 62.8 32 0.0011 25.7 7.3 55 147-208 112-179 (216)
10 1m5a_B Insulin B chain; alpha 56.1 13 0.00045 18.4 2.7 18 4-21 10-27 (30)
11 3i3q_A Alpha-ketoglutarate-dep 55.2 55 0.0019 24.3 7.4 57 147-211 106-172 (211)
12 4f3y_A DHPR, dihydrodipicolina 54.0 9.9 0.00034 29.6 3.3 40 3-42 109-148 (272)
13 3qy9_A DHPR, dihydrodipicolina 52.8 11 0.00038 28.8 3.3 42 2-43 87-128 (243)
14 3ijp_A DHPR, dihydrodipicolina 51.7 12 0.0004 29.5 3.3 40 4-43 125-164 (288)
15 2da7_A Zinc finger homeobox pr 50.3 9.4 0.00032 23.2 2.0 40 101-140 14-53 (71)
16 2jig_A Prolyl-4 hydroxylase; h 49.1 40 0.0014 25.0 5.9 23 18-40 21-43 (224)
17 3tht_A Alkylated DNA repair pr 48.7 19 0.00064 29.1 4.2 58 146-211 198-262 (345)
18 2ivy_A Hypothetical protein SS 46.5 39 0.0013 21.9 4.8 41 2-42 13-57 (101)
19 2ww6_A Fibritin, T4 fibritin; 46.2 15 0.00053 17.5 2.0 13 186-198 12-24 (27)
20 3exc_X Uncharacterized protein 45.6 34 0.0012 21.7 4.3 42 2-43 14-59 (91)
21 3pvj_A Alpha-ketoglutarate-dep 44.5 31 0.001 26.7 4.7 39 2-43 26-64 (277)
22 1otj_A Alpha-ketoglutarate-dep 43.5 32 0.0011 26.4 4.8 38 2-42 28-65 (283)
23 2x4k_A 4-oxalocrotonate tautom 42.5 25 0.00085 19.7 3.1 24 113-136 18-41 (63)
24 2qt7_A Receptor-type tyrosine- 42.5 8.6 0.00029 24.6 1.0 36 117-152 18-53 (91)
25 3abf_A 4-oxalocrotonate tautom 40.5 25 0.00084 20.0 2.9 23 114-136 17-39 (64)
26 1oih_A Putative alkylsulfatase 38.1 43 0.0015 26.0 4.7 39 2-43 38-77 (301)
27 3o2g_A Gamma-butyrobetaine dio 38.0 35 0.0012 27.8 4.3 40 2-44 134-173 (388)
28 3r1j_A Alpha-ketoglutarate-dep 37.5 47 0.0016 26.0 4.9 40 2-44 32-72 (301)
29 4hti_A Receptor-type tyrosine- 36.8 14 0.00049 24.0 1.4 39 117-155 25-63 (99)
30 2iuw_A Alkylated repair protei 35.9 50 0.0017 24.9 4.6 58 147-211 127-203 (238)
31 2opa_A Probable tautomerase YW 32.6 45 0.0015 18.6 3.1 23 113-135 15-37 (61)
32 1otf_A 4-oxalocrotonate tautom 32.1 45 0.0016 18.6 3.1 23 113-135 15-37 (62)
33 2wfu_B Probable insulin-like p 31.8 23 0.00077 17.0 1.3 15 3-18 8-22 (26)
34 2do1_A Nuclear protein HCC-1; 29.9 51 0.0018 18.8 2.9 31 6-39 15-45 (55)
35 2rdq_A 1-deoxypentalenic acid 29.8 61 0.0021 24.7 4.3 36 7-43 22-57 (288)
36 3s57_A Alpha-ketoglutarate-dep 28.8 1.2E+02 0.0039 22.2 5.5 58 147-211 101-176 (204)
37 3ry0_A Putative tautomerase; o 28.6 57 0.0019 18.6 3.1 24 112-135 14-37 (65)
38 1vm6_A DHPR, dihydrodipicolina 28.1 46 0.0016 25.1 3.1 37 6-42 92-128 (228)
39 1zpw_X Hypothetical protein TT 28.0 1.1E+02 0.0039 19.0 4.8 41 2-43 14-58 (90)
40 1dih_A Dihydrodipicolinate red 27.6 47 0.0016 25.6 3.3 16 117-132 170-185 (273)
41 3m0z_A Putative aldolase; MCSG 27.5 65 0.0022 24.4 3.8 36 3-39 173-209 (249)
42 2v4x_A JSRV capsid, capsid pro 26.5 34 0.0012 23.7 2.0 16 2-17 15-30 (140)
43 1y66_A Engrailed homeodomain; 25.8 83 0.0028 16.8 3.4 39 102-140 7-45 (52)
44 1nx8_A CARC, carbapenem syntha 25.8 80 0.0027 23.9 4.3 34 6-42 29-62 (273)
45 2fk5_A Fuculose-1-phosphate al 25.5 33 0.0011 25.1 2.0 25 2-26 129-153 (200)
46 2kgf_A Capsid protein P27; ret 25.3 37 0.0013 23.5 2.0 16 2-17 20-35 (140)
47 3mb2_A 4-oxalocrotonate tautom 25.1 67 0.0023 18.8 3.0 24 113-136 16-39 (72)
48 3m21_A Probable tautomerase HP 24.9 72 0.0025 18.3 3.1 23 113-135 18-40 (67)
49 3m6y_A 4-hydroxy-2-oxoglutarat 24.8 70 0.0024 24.5 3.6 36 3-39 196-232 (275)
50 2opi_A L-fuculose-1-phosphate 24.2 29 0.001 25.6 1.5 25 2-26 136-160 (212)
51 1p9l_A Dihydrodipicolinate red 24.2 61 0.0021 24.6 3.3 37 3-39 55-92 (245)
52 1pvt_A Sugar-phosphate aldolas 24.0 38 0.0013 25.4 2.1 25 2-26 172-196 (238)
53 1zei_A Insulin, B28Asp-X-MCR; 23.4 80 0.0027 17.8 2.9 19 3-21 9-27 (53)
54 1gyx_A YDCE, B1461, hypothetic 23.1 78 0.0027 18.8 3.1 24 113-136 16-39 (76)
55 2opw_A Phyhd1 protein; double- 23.1 86 0.0029 23.9 4.1 36 7-43 6-41 (291)
56 2lm0_A AF4/FMR2 family member 23.1 22 0.00074 24.0 0.5 28 2-29 76-103 (125)
57 3m20_A 4-oxalocrotonate tautom 22.6 66 0.0023 18.2 2.6 23 113-135 14-36 (62)
58 1wy3_A Villin; structural prot 22.3 45 0.0015 17.1 1.5 26 27-52 2-28 (35)
59 3eat_X Pyoverdine biosynthesis 21.7 70 0.0024 24.8 3.3 39 2-43 41-81 (293)
60 1und_A Advillin, P92; actin bi 21.5 47 0.0016 17.3 1.5 27 26-52 3-30 (37)
61 2z7b_A MLR6791 protein; class 21.1 45 0.0015 25.7 2.0 25 2-26 177-201 (270)
62 2v9l_A Rhamnulose-1-phosphate 20.7 45 0.0015 25.7 1.9 25 2-26 190-214 (274)
63 1uxc_A FRUR (1-57), fructose r 20.7 47 0.0016 19.4 1.6 17 2-18 31-47 (65)
64 3r84_A Mediator of RNA polymer 20.3 1.6E+02 0.0054 18.5 4.0 32 100-131 42-76 (86)
65 2k9l_A RNA polymerase sigma fa 20.2 57 0.002 19.7 2.0 39 2-40 30-74 (76)
66 3ocr_A Class II aldolase/adduc 20.2 45 0.0015 25.8 1.8 25 2-26 168-192 (273)
67 3rcm_A TATD family hydrolase; 20.0 1.8E+02 0.0063 22.4 5.4 36 6-41 19-54 (287)
68 1zav_A 50S ribosomal protein L 20.0 2.4E+02 0.0083 20.0 5.8 38 3-40 9-47 (180)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=3.9e-58 Score=380.88 Aligned_cols=209 Identities=33% Similarity=0.706 Sum_probs=190.9
Q ss_pred HHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhcCCHHHHhhhccccC-CcccccccccccCCCccCChhHhhh
Q 042664 4 QELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIA-IGFEGYANHIINGEEQAFDWIDRLY 82 (213)
Q Consensus 4 ~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~Gy~~~~~~~~~~~~d~~e~~~ 82 (213)
+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++..... ..++||+........+..||+|.|.
T Consensus 65 ~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~ 144 (356)
T 1gp6_A 65 NCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFF 144 (356)
T ss_dssp HHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEE
T ss_pred HHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheee
Confidence 478999999999999999999999999999999999999999999999976543 4689998876655567889999999
Q ss_pred ccCCCCccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhHHHhHhCC--CCccceEeeecCCCCCCC
Q 042664 83 LITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGE--EATMIAVYNLYPPCPRPD 160 (213)
Q Consensus 83 ~~~~p~~~~~~~~wP~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~--~~~~~lr~~~Yp~~~~~~ 160 (213)
+...|.....+|.||+.+|.||+.+++|++.|.+++..|+++|+++||+++++|.+.+.. .+.+.||++|||||+.++
T Consensus 145 ~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~ 224 (356)
T 1gp6_A 145 HLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPE 224 (356)
T ss_dssp EEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTT
T ss_pred eecCCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcc
Confidence 887665445678999999999999999999999999999999999999999999998832 478899999999999988
Q ss_pred CccccCCccCCCceEEEeeCCCCCceeEeeCCceEEccCCCCcEEEecCccCC
Q 042664 161 LAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE 213 (213)
Q Consensus 161 ~~~~~~~HtD~~~lTll~q~~~~~GLqv~~~g~W~~v~~~~~~~iVn~Gd~le 213 (213)
..+|+++|||+|+||||+|| .++||||+.+|+|++|+|.||++||||||+||
T Consensus 225 ~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~ 276 (356)
T 1gp6_A 225 LALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE 276 (356)
T ss_dssp TCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred cccCcCCccCCCeEEEEEEc-CCCCeEEecCCcEEECcCCCCeEEEEeccHHH
Confidence 88999999999999999998 79999999999999999999999999999985
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=3.3e-57 Score=369.71 Aligned_cols=208 Identities=25% Similarity=0.414 Sum_probs=183.5
Q ss_pred HHHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhcCCHHHHhhhccccCCcccccccccccC--CCccCChhHh
Q 042664 3 AQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGYANHIING--EEQAFDWIDR 80 (213)
Q Consensus 3 ~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~~~~--~~~~~d~~e~ 80 (213)
++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++..... ..+||.+.+.+. .....||+|.
T Consensus 20 ~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~-~~~Gy~~~g~e~~~~~~~~D~kE~ 98 (312)
T 3oox_A 20 TRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKG-GARGYIPFGVETAKGADHYDLKEF 98 (312)
T ss_dssp HHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGG-GTSEEECCCCCCSTTSCSCCCCEE
T ss_pred HHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCC-CccccccccceecCCCCCCCceee
Confidence 5689999999999999999999999999999999999999999999999976533 689997765543 2356899999
Q ss_pred hhccCC-CCc-----cccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhHHHhHhCCCCccceEeeecC
Q 042664 81 LYLITG-PED-----RKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNLYP 154 (213)
Q Consensus 81 ~~~~~~-p~~-----~~~~~~wP~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp 154 (213)
|.++.. +.. ...+|.||+.+|.||+++++|++.|.+++.+|+++|+++||+++++|.+.+ +.+.+.||++|||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~-~~~~~~lr~~~Yp 177 (312)
T 3oox_A 99 WHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTV-QDGNSVLRLLHYP 177 (312)
T ss_dssp EEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHH-TTCCCEEEEEEEC
T ss_pred eEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHh-cCCcceeeeEecC
Confidence 988653 211 124689999999999999999999999999999999999999999999998 5678899999999
Q ss_pred CCCCCCCccccCCccCCCceEEEeeCCCCCceeEee-CCceEEccCCCCcEEEecCccCC
Q 042664 155 PCPRPDLAIGLKPHADGTAFTYLLQDKEVEGLQVLK-DNQWYRVPVIPEAFVINVGDQIE 213 (213)
Q Consensus 155 ~~~~~~~~~~~~~HtD~~~lTll~q~~~~~GLqv~~-~g~W~~v~~~~~~~iVn~Gd~le 213 (213)
|++.++..+|+++|||+|+||||+|| .++||||+. +|+|++|+|.||++||||||+||
T Consensus 178 p~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~ 236 (312)
T 3oox_A 178 PIPKDATGVRAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGDMLE 236 (312)
T ss_dssp CCSSCCC--CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECHHHH
T ss_pred CCCCCcCCcCccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHHHHH
Confidence 99987655999999999999999998 899999986 89999999999999999999985
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=2.6e-56 Score=364.80 Aligned_cols=203 Identities=30% Similarity=0.570 Sum_probs=181.0
Q ss_pred HHHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhcCCHHHHhhhccccCCcccccccccccCCCccCChhHhhh
Q 042664 3 AQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGYANHIINGEEQAFDWIDRLY 82 (213)
Q Consensus 3 ~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~ 82 (213)
++++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... .+||..... ..+..||+|.|.
T Consensus 18 ~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~~~~~--e~~~~d~ke~~~ 91 (319)
T 1w9y_A 18 AATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALEGVQA--EVTDMDWESTFF 91 (319)
T ss_dssp HHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTCCC--CGGGCCCCEEEE
T ss_pred HHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCCcccc--cCCCCChhhhee
Confidence 56899999999999999999999999999999999999999999999998543 246755432 245689999999
Q ss_pred ccCCCCccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhHHHhHhCC--CCccceEeeecCCCCCCC
Q 042664 83 LITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGE--EATMIAVYNLYPPCPRPD 160 (213)
Q Consensus 83 ~~~~p~~~~~~~~wP~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~--~~~~~lr~~~Yp~~~~~~ 160 (213)
+...|.. .+|.||+.+|.||+.+++|++.|.+++.+|+++|+++||+++++|.+.+.. .+.+.||++|||||+.++
T Consensus 92 ~~~~p~~--~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~ 169 (319)
T 1w9y_A 92 LKHLPIS--NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPD 169 (319)
T ss_dssp EEEESCC--GGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSCGG
T ss_pred eecCCcc--cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEecCCCcccc
Confidence 8765532 468899999999999999999999999999999999999999999988842 366799999999999888
Q ss_pred CccccCCccCCCceEEEeeCCCCCceeEeeCCceEEccCCCCcEEEecCccCC
Q 042664 161 LAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE 213 (213)
Q Consensus 161 ~~~~~~~HtD~~~lTll~q~~~~~GLqv~~~g~W~~v~~~~~~~iVn~Gd~le 213 (213)
..+|+++|||+|+||||+||+.++||||+.+|+|++|+|.||++||||||+||
T Consensus 170 ~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~ 222 (319)
T 1w9y_A 170 LIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLE 222 (319)
T ss_dssp GGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred cccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHH
Confidence 88999999999999999995479999999899999999999999999999985
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=5e-54 Score=350.50 Aligned_cols=194 Identities=19% Similarity=0.280 Sum_probs=162.8
Q ss_pred HHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhcCC-HHHHhhhccccCCcccccccccccC------CCccCChhH
Q 042664 7 EKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALP-AEEKNKYARDIAIGFEGYANHIING------EEQAFDWID 79 (213)
Q Consensus 7 ~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~Gy~~~~~~~------~~~~~d~~e 79 (213)
++|.+||++||||||+|||||.++++++++.+++||+|| .|+|+++........+||.+.+.+. ..+..||+|
T Consensus 20 ~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~e~~~~~~~~~~~~d~~E 99 (311)
T 1dcs_A 20 DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYSM 99 (311)
T ss_dssp HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC-----------------CE
T ss_pred HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccccccccccCCCCCCCcce
Confidence 489999999999999999999999999999999999999 9999999775443689998776542 246789999
Q ss_pred hhhccCCCCccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhHcCC----ChhHHHhHhCCCCccceEeeecCC
Q 042664 80 RLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNL----EENCFLDMYGEEATMIAVYNLYPP 155 (213)
Q Consensus 80 ~~~~~~~p~~~~~~~~wP~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl----~~~~~~~~~~~~~~~~lr~~~Yp~ 155 (213)
.|.++.. +|.|| +|.|++.+++|++.|.+++..|+++|+++||+ ++++|.+. .+.||++||||
T Consensus 100 ~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~-----~~~lrl~~YPp 166 (311)
T 1dcs_A 100 CYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC-----EPLLRFRYFPQ 166 (311)
T ss_dssp EEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC-----CCEEEEEEECC
T ss_pred eeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc-----chhhheecCCC
Confidence 9998764 47899 99999999999999999999999999999999 88887643 67899999999
Q ss_pred CCCCC--C--ccccCCccCCCceEEEeeCCCCCc---eeEeeCCceEEccCCCCcEEEecCccCC
Q 042664 156 CPRPD--L--AIGLKPHADGTAFTYLLQDKEVEG---LQVLKDNQWYRVPVIPEAFVINVGDQIE 213 (213)
Q Consensus 156 ~~~~~--~--~~~~~~HtD~~~lTll~q~~~~~G---Lqv~~~g~W~~v~~~~~~~iVn~Gd~le 213 (213)
|+.++ + .+|+++|||+|+||||+||+.++| |||+++|+|++|+|.||++||||||+||
T Consensus 167 ~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~ 231 (311)
T 1dcs_A 167 VPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIAT 231 (311)
T ss_dssp -----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred CCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHH
Confidence 98764 3 789999999999999999746899 9999999999999999999999999985
No 5
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=5.5e-53 Score=339.52 Aligned_cols=198 Identities=23% Similarity=0.295 Sum_probs=168.6
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhcCCHHHHhhhccccCCccccccccc-ccC--CCccCChh
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGYANHI-ING--EEQAFDWI 78 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~-~~~--~~~~~d~~ 78 (213)
+.+++++|.+||++||||||+|||||.++++++++.+++||++ |+|+++...+. ..+||.+.. .+. .....||+
T Consensus 11 ~~~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~-~~~GY~~~~~~e~~~~~~~~D~k 87 (280)
T 3on7_A 11 AADSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRE-THDGFFPASISETAKGHTVKDIK 87 (280)
T ss_dssp STTHHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTT-TCCEEECCC--------CCCCSC
T ss_pred ChhHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCC-CCCccccCccccccCCCCcccHH
Confidence 3467899999999999999999999999999999999999997 79999876554 689998764 222 23467999
Q ss_pred HhhhccCCCCccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhHcCCCh--hH---HHhHhCCCCccceEeeec
Q 042664 79 DRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEE--NC---FLDMYGEEATMIAVYNLY 153 (213)
Q Consensus 79 e~~~~~~~p~~~~~~~~wP~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~--~~---~~~~~~~~~~~~lr~~~Y 153 (213)
|.|++. .||..++.||+++++|+++|.+++.+|+++|+++||++. ++ |.+.+.....+.||++||
T Consensus 88 E~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~Y 157 (280)
T 3on7_A 88 EYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHY 157 (280)
T ss_dssp EEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEE
T ss_pred HHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEEC
Confidence 988763 378788999999999999999999999999999999762 22 455553333489999999
Q ss_pred CCCCCCC--CccccCCccCCCceEEEeeCCCCCceeEee-CCceEEccCCCCcEEEecCccCC
Q 042664 154 PPCPRPD--LAIGLKPHADGTAFTYLLQDKEVEGLQVLK-DNQWYRVPVIPEAFVINVGDQIE 213 (213)
Q Consensus 154 p~~~~~~--~~~~~~~HtD~~~lTll~q~~~~~GLqv~~-~g~W~~v~~~~~~~iVn~Gd~le 213 (213)
|||+.++ ..+|+++|||+|+||||+|| .++||||++ +|+|++|+|.||++|||+||+||
T Consensus 158 P~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~ 219 (280)
T 3on7_A 158 PPMTGDEEMGAIRAAAHEDINLITVLPTA-NEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQ 219 (280)
T ss_dssp CCCCTTCCCCSEEEEEECCCSSEEEEECC-SCCCEEEECTTSCEEECCCCTTCEEEEECHHHH
T ss_pred CCCCCccccCcccccCCCCCCeEEEEEec-CCCCeEEEcCCCCEEECcCCCCEEEEEcChHHH
Confidence 9999765 57999999999999999998 899999997 89999999999999999999985
No 6
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=8.3e-53 Score=346.14 Aligned_cols=198 Identities=24% Similarity=0.364 Sum_probs=174.8
Q ss_pred HHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHh-hcCCHHHHhhhccccCCcccccccccccC--C------Ccc
Q 042664 4 QELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQF-FALPAEEKNKYARDIAIGFEGYANHIING--E------EQA 74 (213)
Q Consensus 4 ~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~~Gy~~~~~~~--~------~~~ 74 (213)
+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +||.+.+.+. . ...
T Consensus 27 ~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------~Gy~~~~~e~~~~~~~~~~~~~ 97 (331)
T 1odm_A 27 RVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------RAYNKEHQDQVRAGYYLSIPGK 97 (331)
T ss_dssp HHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC------TTTCTTCTTCSSSEEECCBTTT
T ss_pred HHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh------cCCCcCCccccccccccccCCC
Confidence 57899999999999999999999 999999999999 9999999999964 5666544332 1 156
Q ss_pred CChhHhhhccCCCCc----------cccCCCCCCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhHHHhHhCC
Q 042664 75 FDWIDRLYLITGPED----------RKQLKFWPEN--PESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGE 142 (213)
Q Consensus 75 ~d~~e~~~~~~~p~~----------~~~~~~wP~~--~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~ 142 (213)
.||+|.|.++..... ...+|.||+. +|+||+.+++|++.|.+++..|+++|+++||+++++|.+.+ +
T Consensus 98 ~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~-~ 176 (331)
T 1odm_A 98 KAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHF-K 176 (331)
T ss_dssp BCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGC-C
T ss_pred CChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHh-c
Confidence 899999998864211 1347899987 99999999999999999999999999999999999999888 5
Q ss_pred CCccceE--eeecC------C---CCCCCC-ccccCCccCCCceEEEeeCCCCCceeEee-CCceEEccCCCCcEEEecC
Q 042664 143 EATMIAV--YNLYP------P---CPRPDL-AIGLKPHADGTAFTYLLQDKEVEGLQVLK-DNQWYRVPVIPEAFVINVG 209 (213)
Q Consensus 143 ~~~~~lr--~~~Yp------~---~~~~~~-~~~~~~HtD~~~lTll~q~~~~~GLqv~~-~g~W~~v~~~~~~~iVn~G 209 (213)
.+.+.|| ++||| | |+.++. .+|+++|||+|+||||+|| .++||||++ +| |++|+|.||++|||||
T Consensus 177 ~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~~g-Wi~V~p~pgalvVNiG 254 (331)
T 1odm_A 177 PDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQS-NVQNLQVETAAG-YQDIEADDTGYLINCG 254 (331)
T ss_dssp TTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEEC-SSCCEEEEETTE-EEECCCCTTSEEEEEC
T ss_pred CcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeC-CCCCEEEEcCCC-eEECCCCCCeEEEEcc
Confidence 6889999 99999 7 777665 8999999999999999998 899999996 88 9999999999999999
Q ss_pred ccCC
Q 042664 210 DQIE 213 (213)
Q Consensus 210 d~le 213 (213)
|+||
T Consensus 255 D~l~ 258 (331)
T 1odm_A 255 SYMA 258 (331)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9985
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=86.11 E-value=3.5 Score=31.65 Aligned_cols=60 Identities=13% Similarity=0.122 Sum_probs=37.8
Q ss_pred cceEeeecCCCCCCCCccccCCccCCC-----------ceEEEeeCCC----C-CceeEeeCCceEEccCCCCcEEEecC
Q 042664 146 MIAVYNLYPPCPRPDLAIGLKPHADGT-----------AFTYLLQDKE----V-EGLQVLKDNQWYRVPVIPEAFVINVG 209 (213)
Q Consensus 146 ~~lr~~~Yp~~~~~~~~~~~~~HtD~~-----------~lTll~q~~~----~-~GLqv~~~g~W~~v~~~~~~~iVn~G 209 (213)
.-+++++|.+.. -..+|.|.. .+|+++.=+. . |.+.+.....=..|+|..|.+++.-.
T Consensus 99 e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s 172 (243)
T 3dkq_A 99 YPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS 172 (243)
T ss_dssp EEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET
T ss_pred ccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC
Confidence 458889996632 246676652 4666654312 2 34666664445789999999998765
Q ss_pred cc
Q 042664 210 DQ 211 (213)
Q Consensus 210 d~ 211 (213)
++
T Consensus 173 ~~ 174 (243)
T 3dkq_A 173 SS 174 (243)
T ss_dssp TS
T ss_pred CC
Confidence 43
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=85.41 E-value=9.8 Score=29.12 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=28.9
Q ss_pred HHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHh
Q 042664 6 LEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQF 41 (213)
Q Consensus 6 ~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~f 41 (213)
...+..++...|++.+.|- ++.+.++.+.+.++.+
T Consensus 16 ~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~ 50 (247)
T 2hbt_A 16 LEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRAL 50 (247)
T ss_dssp HHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhh
Confidence 4678889999999887654 8999999999888764
No 9
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=62.79 E-value=32 Score=25.66 Aligned_cols=55 Identities=15% Similarity=-0.086 Sum_probs=32.0
Q ss_pred ceEeeecCCCCCCCCccccCCccCCC-----------ceEEEeeCCC--CCceeEeeCCceEEccCCCCcEEEec
Q 042664 147 IAVYNLYPPCPRPDLAIGLKPHADGT-----------AFTYLLQDKE--VEGLQVLKDNQWYRVPVIPEAFVINV 208 (213)
Q Consensus 147 ~lr~~~Yp~~~~~~~~~~~~~HtD~~-----------~lTll~q~~~--~~GLqv~~~g~W~~v~~~~~~~iVn~ 208 (213)
-+++.+|.+... ..+|.|.. .+|+++.=+. .+|=-+..+ .=+.|.|..|.+++.-
T Consensus 112 ~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~-~~~~V~P~~G~al~f~ 179 (216)
T 3itq_A 112 GLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPK-LNLSVHPRKGMAVYFE 179 (216)
T ss_dssp CCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETT-TTEEECCCTTCEEEEE
T ss_pred ceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecC-CCCEEecCCCeEEEEe
Confidence 478888865321 35666653 3777765312 233222222 2378899999988864
No 10
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=56.09 E-value=13 Score=18.43 Aligned_cols=18 Identities=28% Similarity=0.300 Sum_probs=15.3
Q ss_pred HHHHHHHHHhhhcceEEE
Q 042664 4 QELEKLRSVLSSWGCFQA 21 (213)
Q Consensus 4 ~~~~~l~~A~~~~Gff~l 21 (213)
.+.+.|.-.|.+-||||-
T Consensus 10 ~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHhccCccccC
Confidence 567888899999999984
No 11
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=55.24 E-value=55 Score=24.29 Aligned_cols=57 Identities=21% Similarity=0.162 Sum_probs=37.0
Q ss_pred ceEeeecCCCCCCCCccccCCccCC-C------ceEEEeeCCCCCceeEee---CCceEEccCCCCcEEEecCcc
Q 042664 147 IAVYNLYPPCPRPDLAIGLKPHADG-T------AFTYLLQDKEVEGLQVLK---DNQWYRVPVIPEAFVINVGDQ 211 (213)
Q Consensus 147 ~lr~~~Yp~~~~~~~~~~~~~HtD~-~------~lTll~q~~~~~GLqv~~---~g~W~~v~~~~~~~iVn~Gd~ 211 (213)
..-+|+|.+ +. +++.|.|- . ++|+-+-. ..-+.+.. .+..+.+...+|+++|.-|+.
T Consensus 106 ~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG~--~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~ 172 (211)
T 3i3q_A 106 ACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLGL--PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES 172 (211)
T ss_dssp EEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEES--CEEEEECCSSTTSCCEEEEECTTCEEEECGGG
T ss_pred EEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECCC--CeEEEEecccCCCceEEEECCCCCEEEECchH
Confidence 467889965 23 68999992 2 23443321 22234433 357889999999999998874
No 12
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=54.05 E-value=9.9 Score=29.60 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhh
Q 042664 3 AQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFF 42 (213)
Q Consensus 3 ~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF 42 (213)
++..++|.++|++.+.|+.-|-.+.-.++.++.+.+.++|
T Consensus 109 ~~~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l 148 (272)
T 4f3y_A 109 EPQKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQF 148 (272)
T ss_dssp HHHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhc
Confidence 3445566666666666666665555556665555555554
No 13
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=52.83 E-value=11 Score=28.78 Aligned_cols=42 Identities=19% Similarity=0.184 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhc
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFA 43 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~ 43 (213)
+++..++|.++|++.+.|+--|-.+.-.++.++.+.+-.+|.
T Consensus 87 s~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~ 128 (243)
T 3qy9_A 87 KEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD 128 (243)
T ss_dssp HHHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC
Confidence 356688999999999999999998888899888887777774
No 14
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=51.75 E-value=12 Score=29.50 Aligned_cols=40 Identities=8% Similarity=0.022 Sum_probs=22.9
Q ss_pred HHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhc
Q 042664 4 QELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFA 43 (213)
Q Consensus 4 ~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~ 43 (213)
+..++|.++|++.++|+.-|-.+.-.++.++.+.+-++|.
T Consensus 125 e~~~~L~~aa~~~~~~~a~N~SiGv~ll~~l~~~aa~~l~ 164 (288)
T 3ijp_A 125 TEEAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKALD 164 (288)
T ss_dssp HHHHHHHHHHTTSEEEECSCCCHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCcCCEEEECCCcHHHHHHHHHHHHHHHhcC
Confidence 3455666666666666666655555555555555554443
No 15
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.35 E-value=9.4 Score=23.23 Aligned_cols=40 Identities=20% Similarity=0.286 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhHHHhHh
Q 042664 101 ESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMY 140 (213)
Q Consensus 101 ~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~ 140 (213)
...+..+++|+..-.+-...-+..||+.+||+...+...+
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWF 53 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWF 53 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 4557889999998888888888999999999998877666
No 16
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=49.09 E-value=40 Score=24.98 Aligned_cols=23 Identities=9% Similarity=-0.062 Sum_probs=16.1
Q ss_pred eEEEEccCCCHHHHHHHHHHHHH
Q 042664 18 CFQAINHGIEPAFLDKVKAVGRQ 40 (213)
Q Consensus 18 ff~l~~hgi~~~~~~~~~~~~~~ 40 (213)
++.+...=++.+.++.+.+.++.
T Consensus 21 ~i~~~~~fLs~~Ec~~li~~~~~ 43 (224)
T 2jig_A 21 RAFLLKNFLSDEECDYIVEKARP 43 (224)
T ss_dssp TEEEETTCSCHHHHHHHHHHHGG
T ss_pred CEEEEcccCCHHHHHHHHHHhhc
Confidence 34455445688899998888765
No 17
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=48.68 E-value=19 Score=29.12 Aligned_cols=58 Identities=17% Similarity=0.194 Sum_probs=38.9
Q ss_pred cceEeeecCCCCCCCCccccCCccCCC------ceEEEeeCCCCCceeEee-CCceEEccCCCCcEEEecCcc
Q 042664 146 MIAVYNLYPPCPRPDLAIGLKPHADGT------AFTYLLQDKEVEGLQVLK-DNQWYRVPVIPEAFVINVGDQ 211 (213)
Q Consensus 146 ~~lr~~~Yp~~~~~~~~~~~~~HtD~~------~lTll~q~~~~~GLqv~~-~g~W~~v~~~~~~~iVn~Gd~ 211 (213)
...-+|+|.+. -++++|.|-. +.|+-+- ...=+.+.. +|.++.+...+|+++|+-|+.
T Consensus 198 n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~ 262 (345)
T 3tht_A 198 DQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGES 262 (345)
T ss_dssp SEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHH
T ss_pred CEEEEEEecCC------CCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHH
Confidence 45678899652 2688999884 3333332 122344444 577999999999999999863
No 18
>2ivy_A Hypothetical protein SSO1404; structural genomics, unknown function, CAS, RNAI, crispr; 1.4A {Sulfolobus solfataricus} SCOP: d.58.58.1 PDB: 2i8e_A
Probab=46.45 E-value=39 Score=21.86 Aligned_cols=41 Identities=12% Similarity=0.023 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHhhhcceEEEEcc----CCCHHHHHHHHHHHHHhh
Q 042664 2 SAQELEKLRSVLSSWGCFQAINH----GIEPAFLDKVKAVGRQFF 42 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~h----gi~~~~~~~~~~~~~~fF 42 (213)
+++...++.+.|+++||..|.+. -++......+.+..+.+.
T Consensus 13 ~~kr~~kv~k~L~~yGl~rvQ~SVFe~~lt~~~~~~l~~~L~~~i 57 (101)
T 2ivy_A 13 DDNLRNRVAEFLKKKGLDRIQYSVFMGDLNSSRLKDVEAGLKIIG 57 (101)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETTEEEEEECHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHhCChhccccEEEEEcCHHHHHHHHHHHHHHh
Confidence 46778999999999999988875 357777777777666666
No 19
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=46.17 E-value=15 Score=17.52 Aligned_cols=13 Identities=23% Similarity=0.314 Sum_probs=10.5
Q ss_pred eeEeeCCceEEcc
Q 042664 186 LQVLKDNQWYRVP 198 (213)
Q Consensus 186 Lqv~~~g~W~~v~ 198 (213)
..|+.+|.|+..+
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 5688899999865
No 20
>3exc_X Uncharacterized protein; ferredoxin fold, double split beta-alpha-beta fold, dimer, C aspartate, RNA'ASE, hydrolase; 2.25A {Sulfolobus solfataricus} SCOP: d.58.58.0
Probab=45.56 E-value=34 Score=21.70 Aligned_cols=42 Identities=12% Similarity=0.135 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHhhhcceEEEEcc----CCCHHHHHHHHHHHHHhhc
Q 042664 2 SAQELEKLRSVLSSWGCFQAINH----GIEPAFLDKVKAVGRQFFA 43 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~h----gi~~~~~~~~~~~~~~fF~ 43 (213)
+++-..++.+.|+++||..|.+. -+++.....+....+...+
T Consensus 14 ~~krr~kv~k~l~~yGl~rvQ~SVFe~~lt~~~~~~L~~~L~~~id 59 (91)
T 3exc_X 14 DDSKRNKLANNLKKLGLERIQRSAFEGDMDSQRMKDLVRVVKLIVD 59 (91)
T ss_dssp SHHHHHHHHHHHHHTTCEEEETTEEEEECC--CHHHHHHHHHHHSC
T ss_pred CchHHHHHHHHHHHhCCccceeeEEEEECCHHHHHHHHHHHHHhcC
Confidence 44567899999999999888875 3566666666655555544
No 21
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=44.49 E-value=31 Score=26.70 Aligned_cols=39 Identities=18% Similarity=0.223 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhc
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFA 43 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~ 43 (213)
+++..++|.+|+.++|.+.+.+..++.+ ...+.++.|=.
T Consensus 26 ~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 26 SAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp CHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred CHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 4678899999999999999999988764 44456666543
No 22
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=43.54 E-value=32 Score=26.42 Aligned_cols=38 Identities=18% Similarity=0.251 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhh
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFF 42 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF 42 (213)
+++..++|.+++.++|++.+.+-.++.+. ..+.++.|=
T Consensus 28 ~~~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~G 65 (283)
T 1otj_A 28 SDNQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRFG 65 (283)
T ss_dssp CHHHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTTS
T ss_pred CHHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhC
Confidence 45678999999999999999998887653 344555553
No 23
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=42.55 E-value=25 Score=19.73 Aligned_cols=24 Identities=8% Similarity=0.101 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHhHcCCChhHH
Q 042664 113 KMVKLNEFLLKAIGLALNLEENCF 136 (213)
Q Consensus 113 ~~~~l~~~ll~~l~~~Lgl~~~~~ 136 (213)
.-.+++..|.+++++.||.|++.+
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 345788889999999999997643
No 24
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=42.52 E-value=8.6 Score=24.63 Aligned_cols=36 Identities=8% Similarity=0.112 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhHcCCChhHHHhHhCCCCccceEeee
Q 042664 117 LNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNL 152 (213)
Q Consensus 117 l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lr~~~ 152 (213)
=+.+|++.+++.|++|.++|.+.-...+.-++|+.-
T Consensus 18 eG~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV~~ 53 (91)
T 2qt7_A 18 AGVKLLEILAEHVHMSSGSFINISVVGPALTFRIRH 53 (91)
T ss_dssp HHHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCccceeeeEeecceEEEEecc
Confidence 377899999999999998887665456666777743
No 25
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=40.51 E-value=25 Score=20.00 Aligned_cols=23 Identities=13% Similarity=-0.104 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHhHcCCChhHH
Q 042664 114 MVKLNEFLLKAIGLALNLEENCF 136 (213)
Q Consensus 114 ~~~l~~~ll~~l~~~Lgl~~~~~ 136 (213)
-.++...|.+.+++.||.|++++
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 45778889999999999987653
No 26
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=38.14 E-value=43 Score=26.02 Aligned_cols=39 Identities=8% Similarity=0.111 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHhhhcceEEEEccC-CCHHHHHHHHHHHHHhhc
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHG-IEPAFLDKVKAVGRQFFA 43 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hg-i~~~~~~~~~~~~~~fF~ 43 (213)
+++..++|.+++.++|++.+.+-. ++. +...+.++.|=.
T Consensus 38 ~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 38 DAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp CHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 356789999999999999999987 875 355556666644
No 27
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=38.02 E-value=35 Score=27.82 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhcC
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFAL 44 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~l 44 (213)
|++...++.+++.++|++.+.+-.++.+ ...+.++.|=.+
T Consensus 134 ~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 134 YDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 5678899999999999999999888754 344556666443
No 28
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=37.46 E-value=47 Score=26.01 Aligned_cols=40 Identities=10% Similarity=0.120 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHhhhcceEEEEcc-CCCHHHHHHHHHHHHHhhcC
Q 042664 2 SAQELEKLRSVLSSWGCFQAINH-GIEPAFLDKVKAVGRQFFAL 44 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~h-gi~~~~~~~~~~~~~~fF~l 44 (213)
+++..++|.+|+.++|.+.+.+. .++.+ ...+.++.|=.+
T Consensus 32 ~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 32 DDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred CHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 46788999999999999999998 78775 444566665433
No 29
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=36.84 E-value=14 Score=23.98 Aligned_cols=39 Identities=10% Similarity=0.044 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhHcCCChhHHHhHhCCCCccceEeeecCC
Q 042664 117 LNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNLYPP 155 (213)
Q Consensus 117 l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~ 155 (213)
-+.+|++.||+.|+++.++|.+.-...+.-++|+.--++
T Consensus 25 ~G~~l~~~la~~l~l~~~~F~~isV~g~aVTFrV~~N~~ 63 (99)
T 4hti_A 25 EGRRLVEDVARLLQVPSSAFADVEVLGPAVTFKVSANVQ 63 (99)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEETTEEEEEECCCTT
T ss_pred HHHHHHHHHHHHhCCchhheeeeeecCceEEEEeccCCC
Confidence 367899999999999988886654456666677654443
No 30
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=35.86 E-value=50 Score=24.93 Aligned_cols=58 Identities=16% Similarity=0.190 Sum_probs=36.2
Q ss_pred ceEeeecCCCCCCCCccccCCccCC--------CceEEEeeCCCCCceeEee-C----------CceEEccCCCCcEEEe
Q 042664 147 IAVYNLYPPCPRPDLAIGLKPHADG--------TAFTYLLQDKEVEGLQVLK-D----------NQWYRVPVIPEAFVIN 207 (213)
Q Consensus 147 ~lr~~~Yp~~~~~~~~~~~~~HtD~--------~~lTll~q~~~~~GLqv~~-~----------g~W~~v~~~~~~~iVn 207 (213)
..-+|+|++. .-++++|.|- .+.||-+-. .-=+.+.. . +..+.+...+|+++|+
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~--~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM 199 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGA--TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIM 199 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEES--CEEEEEEECCC--------CCCEEEEEECTTCEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCC--CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEE
Confidence 4578999753 2257888884 233333321 11233333 1 4688999999999999
Q ss_pred cCcc
Q 042664 208 VGDQ 211 (213)
Q Consensus 208 ~Gd~ 211 (213)
-|+.
T Consensus 200 ~G~~ 203 (238)
T 2iuw_A 200 EGAT 203 (238)
T ss_dssp EETH
T ss_pred Chhh
Confidence 8863
No 31
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=32.58 E-value=45 Score=18.58 Aligned_cols=23 Identities=17% Similarity=0.070 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHhHcCCChhH
Q 042664 113 KMVKLNEFLLKAIGLALNLEENC 135 (213)
Q Consensus 113 ~~~~l~~~ll~~l~~~Lgl~~~~ 135 (213)
.-.+++..|.+.+.+.||.|++.
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~ 37 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEK 37 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcCe
Confidence 34578888999999999998753
No 32
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=32.09 E-value=45 Score=18.59 Aligned_cols=23 Identities=13% Similarity=0.033 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHhHcCCChhH
Q 042664 113 KMVKLNEFLLKAIGLALNLEENC 135 (213)
Q Consensus 113 ~~~~l~~~ll~~l~~~Lgl~~~~ 135 (213)
.-.+++..|.+++.+.||.|++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 34578888999999999998753
No 33
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=31.81 E-value=23 Score=16.95 Aligned_cols=15 Identities=20% Similarity=0.330 Sum_probs=11.2
Q ss_pred HHHHHHHHHHhhhcce
Q 042664 3 AQELEKLRSVLSSWGC 18 (213)
Q Consensus 3 ~~~~~~l~~A~~~~Gf 18 (213)
.++.+.|..+|.+ ||
T Consensus 8 ~~L~eaL~~vC~~-GF 22 (26)
T 2wfu_B 8 PALMDMLRVACPN-GF 22 (26)
T ss_dssp HHHHHHHHHHCSS-CC
T ss_pred HHHHHHHHHHHhc-cC
Confidence 4667788888877 76
No 34
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=29.93 E-value=51 Score=18.79 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=23.8
Q ss_pred HHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHH
Q 042664 6 LEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGR 39 (213)
Q Consensus 6 ~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~ 39 (213)
+.+|.+.|+..| |.-.|.-.++++++.+...
T Consensus 15 V~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 15 LAELKQECLARG---LETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp HHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHh
Confidence 568899999998 4557778889988877543
No 35
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=29.80 E-value=61 Score=24.71 Aligned_cols=36 Identities=17% Similarity=0.177 Sum_probs=29.5
Q ss_pred HHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhc
Q 042664 7 EKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFA 43 (213)
Q Consensus 7 ~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~ 43 (213)
+++.+.+++.||+.|.+- ++.+.++++.+...++++
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 457889999999999864 799999998888887754
No 36
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=28.78 E-value=1.2e+02 Score=22.25 Aligned_cols=58 Identities=10% Similarity=0.090 Sum_probs=35.5
Q ss_pred ceEeeecCCCCCCCCccccCCccCCC--------ceEEEeeCCCCCceeEee----------CCceEEccCCCCcEEEec
Q 042664 147 IAVYNLYPPCPRPDLAIGLKPHADGT--------AFTYLLQDKEVEGLQVLK----------DNQWYRVPVIPEAFVINV 208 (213)
Q Consensus 147 ~lr~~~Yp~~~~~~~~~~~~~HtD~~--------~lTll~q~~~~~GLqv~~----------~g~W~~v~~~~~~~iVn~ 208 (213)
..-+|+|.+.. -+++.|.|-. +.+|-+-. ..=+.+.. .+..+.+...+|+++|+-
T Consensus 101 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG~--~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~ 173 (204)
T 3s57_A 101 FVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFGA--SRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMN 173 (204)
T ss_dssp EEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEES--CEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEE
T ss_pred eeEEEEECCCC-----CcccceecChhhccCCCcEEEEECCC--ceEEEEEEcCCCccccccCCceEEEECCCCCEEEEC
Confidence 35689997532 2578888862 22333321 22234433 125788999999999998
Q ss_pred Ccc
Q 042664 209 GDQ 211 (213)
Q Consensus 209 Gd~ 211 (213)
|+.
T Consensus 174 g~~ 176 (204)
T 3s57_A 174 HPT 176 (204)
T ss_dssp TTH
T ss_pred chh
Confidence 864
No 37
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=28.60 E-value=57 Score=18.64 Aligned_cols=24 Identities=21% Similarity=0.146 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHhHcCCChhH
Q 042664 112 AKMVKLNEFLLKAIGLALNLEENC 135 (213)
Q Consensus 112 ~~~~~l~~~ll~~l~~~Lgl~~~~ 135 (213)
+.-++++..|.+++.+.||.|++.
T Consensus 14 eqk~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 14 QEVAALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345678888999999999998754
No 38
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=28.13 E-value=46 Score=25.14 Aligned_cols=37 Identities=22% Similarity=0.178 Sum_probs=17.7
Q ss_pred HHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhh
Q 042664 6 LEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFF 42 (213)
Q Consensus 6 ~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF 42 (213)
.++|.+++++.++++--|-.+.-.++.++.+.+.++|
T Consensus 92 ~~~l~~~a~~~~vv~apNfSlGvnll~~l~~~aA~~l 128 (228)
T 1vm6_A 92 LQMLRELSKEVPVVQAYNFSIGINVLKRFLSELVKVL 128 (228)
T ss_dssp HHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhCCEEEeccccHHHHHHHHHHHHHHHhc
Confidence 3444445555555555554444444444444444444
No 39
>1zpw_X Hypothetical protein TT1823; hyphotetical protein, structural genom NPPSFA, national project on protein structural and function analyses; 1.64A {Thermus thermophilus} SCOP: d.58.58.1
Probab=27.97 E-value=1.1e+02 Score=19.04 Aligned_cols=41 Identities=17% Similarity=0.305 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHhhhcceEEEEcc----CCCHHHHHHHHHHHHHhhc
Q 042664 2 SAQELEKLRSVLSSWGCFQAINH----GIEPAFLDKVKAVGRQFFA 43 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~h----gi~~~~~~~~~~~~~~fF~ 43 (213)
+++-..++.+.|+++| ..+.+. -++.....++.+..+.+.+
T Consensus 14 ~~kr~~kv~k~l~~yg-~rvQ~SVFe~~lt~~~~~~L~~~L~~~id 58 (90)
T 1zpw_X 14 DDTRRVKLANLLKSYG-ERVQLSVFECYLDERLLEDLRRRARRLLD 58 (90)
T ss_dssp CHHHHHHHHHHHHTTE-EEEETTEEEEEECHHHHHHHHHHHHHHCC
T ss_pred ChHHHHHHHHHHHHhC-ccceEeEEEEEcCHHHHHHHHHHHHHhhC
Confidence 4567889999999999 777765 2566666666666655554
No 40
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=27.65 E-value=47 Score=25.61 Aligned_cols=16 Identities=25% Similarity=0.150 Sum_probs=11.2
Q ss_pred HHHHHHHHHHhHcCCC
Q 042664 117 LNEFLLKAIGLALNLE 132 (213)
Q Consensus 117 l~~~ll~~l~~~Lgl~ 132 (213)
.|.++.+.|++.++..
T Consensus 170 TA~~~ae~i~~~~~~~ 185 (273)
T 1dih_A 170 TALAMGEAIAHALDKD 185 (273)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhhCCC
Confidence 5666677777777764
No 41
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=27.45 E-value=65 Score=24.43 Aligned_cols=36 Identities=11% Similarity=0.117 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhhhcceEEEEcc-CCCHHHHHHHHHHHH
Q 042664 3 AQELEKLRSVLSSWGCFQAINH-GIEPAFLDKVKAVGR 39 (213)
Q Consensus 3 ~~~~~~l~~A~~~~Gff~l~~h-gi~~~~~~~~~~~~~ 39 (213)
.++.+.+.+||.+.|| ++.-. ||+.+-+..+++.+.
T Consensus 173 l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l 209 (249)
T 3m0z_A 173 RAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIAL 209 (249)
T ss_dssp HHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHH
Confidence 4788899999999999 66654 798877776666553
No 42
>2v4x_A JSRV capsid, capsid protein P27; virion, zinc-finger, metal-binding, CAPS protein, structural protein, viral nucleoprotein; HET: MSE; 1.5A {Jaagsiekte sheep retrovirus}
Probab=26.52 E-value=34 Score=23.72 Aligned_cols=16 Identities=25% Similarity=0.507 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHhhhcc
Q 042664 2 SAQELEKLRSVLSSWG 17 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~G 17 (213)
+.+.+++|.+||+.+|
T Consensus 15 ~~K~IkeLk~Av~~YG 30 (140)
T 2v4x_A 15 PFKQLKELKIACSQYG 30 (140)
T ss_dssp CHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhC
Confidence 4678999999999987
No 43
>1y66_A Engrailed homeodomain; protein design, dioxane, de novo protein; 1.65A {Escherichia coli} PDB: 2p6j_A
Probab=25.85 E-value=83 Score=16.77 Aligned_cols=39 Identities=13% Similarity=0.290 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhHHHhHh
Q 042664 102 SFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMY 140 (213)
Q Consensus 102 ~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~ 140 (213)
.....+++|.+.-.++...-+.-.++.||+....+...+
T Consensus 7 everklkefvrrhqeitqetlheyaqklglnqqaieqff 45 (52)
T 1y66_A 7 EVERKLKEFVRRHQEITQETLHEYAQKLGLNQQAIEQFF 45 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHH
Confidence 445678888888889998888889999998765554443
No 44
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=25.79 E-value=80 Score=23.93 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=26.2
Q ss_pred HHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhh
Q 042664 6 LEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFF 42 (213)
Q Consensus 6 ~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF 42 (213)
.++|.+++.++|++.+.+-.++.+ ...+.++.|=
T Consensus 29 ~~~l~~~l~~~G~v~~rg~~~~~~---~~~~~~~~~G 62 (273)
T 1nx8_A 29 TETIKNLLMRQGFVVVKNLDIDSD---TFRDIYSAYG 62 (273)
T ss_dssp HHHHHHHHHHHCEEEECSCCCCHH---HHHHHHHTTS
T ss_pred HHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 678999999999999999888764 4445555553
No 45
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=25.50 E-value=33 Score=25.11 Aligned_cols=25 Identities=12% Similarity=0.132 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCC
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGI 26 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi 26 (213)
++++++.+.+++++.-.+.|.|||+
T Consensus 129 ~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 129 TEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp SHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred cHHHHHHHHHHhCcCCEEEECCCCc
Confidence 4577888888888888888889985
No 46
>2kgf_A Capsid protein P27; retrovirus capsid protein, N-terminal core domain (SCOP), viral protein; NMR {Mason-pfizer monkey virus}
Probab=25.32 E-value=37 Score=23.55 Aligned_cols=16 Identities=19% Similarity=0.449 Sum_probs=13.8
Q ss_pred hHHHHHHHHHHhhhcc
Q 042664 2 SAQELEKLRSVLSSWG 17 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~G 17 (213)
+.+.+++|.+||+.+|
T Consensus 20 ~~K~iKeLk~Av~~YG 35 (140)
T 2kgf_A 20 DFAVIKELKTAASQYG 35 (140)
T ss_dssp CHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhC
Confidence 4578999999999977
No 47
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=25.14 E-value=67 Score=18.84 Aligned_cols=24 Identities=17% Similarity=0.106 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHhHcCCChhHH
Q 042664 113 KMVKLNEFLLKAIGLALNLEENCF 136 (213)
Q Consensus 113 ~~~~l~~~ll~~l~~~Lgl~~~~~ 136 (213)
.-+++...|.+++++.||.|++.+
T Consensus 16 qK~~L~~~it~~l~~~lg~p~~~v 39 (72)
T 3mb2_A 16 QKAELARALSAAAAAAFDVPLAEV 39 (72)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccE
Confidence 446788889999999999987543
No 48
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=24.87 E-value=72 Score=18.33 Aligned_cols=23 Identities=17% Similarity=0.053 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHhHcCCChhH
Q 042664 113 KMVKLNEFLLKAIGLALNLEENC 135 (213)
Q Consensus 113 ~~~~l~~~ll~~l~~~Lgl~~~~ 135 (213)
.-.++...|.+++++.||.|++.
T Consensus 18 qK~~l~~~lt~~l~~~lg~p~~~ 40 (67)
T 3m21_A 18 QKQQLIEGVSDLMVKVLNKNKAS 40 (67)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHCcCccc
Confidence 44577888889999999998653
No 49
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=24.80 E-value=70 Score=24.54 Aligned_cols=36 Identities=11% Similarity=0.181 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhhhcceEEEEcc-CCCHHHHHHHHHHHH
Q 042664 3 AQELEKLRSVLSSWGCFQAINH-GIEPAFLDKVKAVGR 39 (213)
Q Consensus 3 ~~~~~~l~~A~~~~Gff~l~~h-gi~~~~~~~~~~~~~ 39 (213)
.++.+.+.+||.+.|| .+.-. ||+.+-+..+++.+.
T Consensus 196 leEl~avAkAca~~g~-~lEPTGGIdl~Nf~~I~~i~l 232 (275)
T 3m6y_A 196 EEEYRAVAKACAEEGF-ALEPTGGIDKENFETIVRIAL 232 (275)
T ss_dssp HHHHHHHHHHHHHHTC-EEEEBSSCCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCc-eECCCCCccHhHHHHHHHHHH
Confidence 4788899999999999 66644 799887777666553
No 50
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=24.23 E-value=29 Score=25.59 Aligned_cols=25 Identities=16% Similarity=0.173 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCC
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGI 26 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi 26 (213)
++++++.+.+++.+.-.+.|.|||+
T Consensus 136 ~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 136 SPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 4578889999998888899999986
No 51
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=24.19 E-value=61 Score=24.59 Aligned_cols=37 Identities=11% Similarity=0.060 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhhhcceEEEEc-cCCCHHHHHHHHHHHH
Q 042664 3 AQELEKLRSVLSSWGCFQAIN-HGIEPAFLDKVKAVGR 39 (213)
Q Consensus 3 ~~~~~~l~~A~~~~Gff~l~~-hgi~~~~~~~~~~~~~ 39 (213)
++....+..+|.+.|.=.|+. .|.+.+..+.+.++++
T Consensus 55 p~a~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~ 92 (245)
T 1p9l_A 55 PDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLV 92 (245)
T ss_dssp TTTHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHH
Confidence 344556666666667655553 4666655555544443
No 52
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=24.03 E-value=38 Score=25.45 Aligned_cols=25 Identities=16% Similarity=-0.056 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCC
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGI 26 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi 26 (213)
++++++++.+++++.-.+.+.|||+
T Consensus 172 ~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 172 SVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp CHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 3456667777777666777777775
No 53
>1zei_A Insulin, B28Asp-X-MCR; hormone, metabolic role, chemical activity, insulin mutant, cross-LINK, glucose metabolism, diabetes; 1.90A {Sus scrofa} SCOP: g.1.1.1 PDB: 6ins_E 1sju_A 2jzq_A
Probab=23.39 E-value=80 Score=17.81 Aligned_cols=19 Identities=26% Similarity=0.303 Sum_probs=15.8
Q ss_pred HHHHHHHHHHhhhcceEEE
Q 042664 3 AQELEKLRSVLSSWGCFQA 21 (213)
Q Consensus 3 ~~~~~~l~~A~~~~Gff~l 21 (213)
.++++.|...|.+-||++-
T Consensus 9 ~~L~daL~~vC~~rgf~~~ 27 (53)
T 1zei_A 9 SHLVEALYLVCGERGFFYT 27 (53)
T ss_dssp HHHHHHHHHHHGGGCEEEE
T ss_pred HHHHHHHHHHHcccCeecC
Confidence 4678889999999998776
No 54
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=23.14 E-value=78 Score=18.80 Aligned_cols=24 Identities=17% Similarity=0.130 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHhHcCCChhHH
Q 042664 113 KMVKLNEFLLKAIGLALNLEENCF 136 (213)
Q Consensus 113 ~~~~l~~~ll~~l~~~Lgl~~~~~ 136 (213)
.-++++..|.+++.+.||.+++.+
T Consensus 16 qk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 16 QKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCCceE
Confidence 346788889999999999997644
No 55
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=23.10 E-value=86 Score=23.93 Aligned_cols=36 Identities=6% Similarity=-0.095 Sum_probs=29.8
Q ss_pred HHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhc
Q 042664 7 EKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFA 43 (213)
Q Consensus 7 ~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~ 43 (213)
++..+.+++.||+.|.+- ++.+.++++.+.+.++++
T Consensus 6 ~e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 41 (291)
T 2opw_A 6 PSQLQKFQQDGFLVLEGF-LSAEECVAMQQRIGEIVA 41 (291)
T ss_dssp HHHHHHHHHHSEEEETTS-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEecCC-CCHHHHHHHHHHHHHHHh
Confidence 456788999999999864 689999999988888765
No 56
>2lm0_A AF4/FMR2 family member 1/protein AF-9 chimera; intrinsically disordered, nuclear protein; NMR {Homo sapiens}
Probab=23.08 E-value=22 Score=24.03 Aligned_cols=28 Identities=14% Similarity=0.271 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCCCHH
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGIEPA 29 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi~~~ 29 (213)
|...+++|.+-.++.|.|.|.|.-++-+
T Consensus 76 d~~~lq~iv~li~~tG~~~it~~tfDFD 103 (125)
T 2lm0_A 76 ERHILQQIVNLIEETGHFHITNTTFDFD 103 (125)
T ss_dssp CCSSHHHHHHHHHTSCCEEECSSCEEEC
T ss_pred cHHHHHHHHHHHHhcCceeeecccccce
Confidence 4456789999999999999999865543
No 57
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=22.59 E-value=66 Score=18.22 Aligned_cols=23 Identities=13% Similarity=0.117 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHhHcCCChhH
Q 042664 113 KMVKLNEFLLKAIGLALNLEENC 135 (213)
Q Consensus 113 ~~~~l~~~ll~~l~~~Lgl~~~~ 135 (213)
.-+++...|.+.+++.||.+++.
T Consensus 14 qK~~L~~~it~~~~~~lg~~~~~ 36 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDRSA 36 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHHHHHhCcCcce
Confidence 34578888999999999998643
No 58
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=22.26 E-value=45 Score=17.13 Aligned_cols=26 Identities=19% Similarity=0.171 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHH-HhhcCCHHHHhhh
Q 042664 27 EPAFLDKVKAVGR-QFFALPAEEKNKY 52 (213)
Q Consensus 27 ~~~~~~~~~~~~~-~fF~lp~e~K~~~ 52 (213)
+.+..+.++.+++ +|..||.-.+...
T Consensus 2 sd~dF~~vFgmsr~eF~~LP~WKq~~l 28 (35)
T 1wy3_A 2 SDEDFKAVFGMTRSAFANLPLWLQQHL 28 (35)
T ss_dssp CHHHHHHHHSSCHHHHHHSCHHHHHHH
T ss_pred CHHHHHHHHCCCHHHHHHCcHHHHHHH
Confidence 5667778888776 6778998876654
No 59
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=21.68 E-value=70 Score=24.82 Aligned_cols=39 Identities=8% Similarity=0.041 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHhhhcceEEEEccC-C-CHHHHHHHHHHHHHhhc
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHG-I-EPAFLDKVKAVGRQFFA 43 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hg-i-~~~~~~~~~~~~~~fF~ 43 (213)
+++..++|.+++.++|++.+.+.. + +.+ ...+.++.|=.
T Consensus 41 ~~~~~~~L~~~l~~~gvv~fRgq~~l~~~~---~~~~~a~~fG~ 81 (293)
T 3eat_X 41 GELPAQWLKGLARSHHLLLLRGFAAFADAE---SLTRYCHDFGE 81 (293)
T ss_dssp GGSCHHHHHHHHHHHSEEEECSCBCCSSHH---HHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHhCEEEECCCCCCCCHH---HHHHHHHHhCC
Confidence 345688999999999999999876 5 444 44456666543
No 60
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=21.51 E-value=47 Score=17.28 Aligned_cols=27 Identities=26% Similarity=0.284 Sum_probs=19.9
Q ss_pred CCHHHHHHHHHHHH-HhhcCCHHHHhhh
Q 042664 26 IEPAFLDKVKAVGR-QFFALPAEEKNKY 52 (213)
Q Consensus 26 i~~~~~~~~~~~~~-~fF~lp~e~K~~~ 52 (213)
++.+..+.++.+++ +|..||.-.+...
T Consensus 3 Lsd~dF~~vFgmsr~eF~~LP~WKq~~l 30 (37)
T 1und_A 3 LSEQDFVSVFGITRGQFAALPGWKQLQM 30 (37)
T ss_dssp CCHHHHHHHHSSCHHHHHHSCHHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHChHHHHHHH
Confidence 35677788888776 6778998876654
No 61
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=21.08 E-value=45 Score=25.74 Aligned_cols=25 Identities=20% Similarity=0.238 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCC
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGI 26 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi 26 (213)
++++++.+.+++.+.-.+.|.|||+
T Consensus 177 s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 177 SPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp SHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CHHHHHHHHHHhccCCEEEEcCCce
Confidence 5688999999999988999999996
No 62
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=20.74 E-value=45 Score=25.74 Aligned_cols=25 Identities=8% Similarity=-0.028 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCC
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGI 26 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi 26 (213)
+.++++.+.+++++.-.+.+.|||+
T Consensus 190 ~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 190 TDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp SHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CHHHHHHHHHHHccCCEEEEcCCCc
Confidence 4577888888888888888888885
No 63
>1uxc_A FRUR (1-57), fructose repressor; DNA-binding protein, LACI family, transc regulation; NMR {Escherichia coli} SCOP: a.35.1.5 PDB: 1uxd_A
Probab=20.69 E-value=47 Score=19.42 Aligned_cols=17 Identities=24% Similarity=0.343 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHhhhcce
Q 042664 2 SAQELEKLRSVLSSWGC 18 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gf 18 (213)
+++.+++|.+++++.||
T Consensus 31 s~et~~rI~~aa~~lgY 47 (65)
T 1uxc_A 31 SDKTVEKVMAVVREHNY 47 (65)
T ss_dssp TTHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCC
Confidence 46778888889888888
No 64
>3r84_A Mediator of RNA polymerase II transcription subun; four-helix bundle, nucleus; HET: MSE; 2.05A {Saccharomyces cerevisiae}
Probab=20.33 E-value=1.6e+02 Score=18.49 Aligned_cols=32 Identities=13% Similarity=0.205 Sum_probs=25.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHH---HHHhHcCC
Q 042664 100 PESFRKILEEYNAKMVKLNEFLLK---AIGLALNL 131 (213)
Q Consensus 100 ~~~f~~~~~~~~~~~~~l~~~ll~---~l~~~Lgl 131 (213)
-+.|++.+..|++.+..++-.|-+ +|.++.|.
T Consensus 42 K~~F~~~t~~fy~tL~~v~v~LrkEIk~LdEnig~ 76 (86)
T 3r84_A 42 KPQFENHVKQFYERLDKSTTQLRKEIQLLDENVGT 76 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 358999999999999999888765 45555554
No 65
>2k9l_A RNA polymerase sigma factor RPON; protein, transcription; NMR {Aquifex aeolicus}
Probab=20.24 E-value=57 Score=19.70 Aligned_cols=39 Identities=15% Similarity=0.052 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHhhhcceEEEEcc------CCCHHHHHHHHHHHHH
Q 042664 2 SAQELEKLRSVLSSWGCFQAINH------GIEPAFLDKVKAVGRQ 40 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~h------gi~~~~~~~~~~~~~~ 40 (213)
+..++..|..++-+.||+..... |++.+.++++++..+.
T Consensus 30 ~~~Ia~~iI~~LD~~GYL~~~l~eia~~l~~~~~eve~vL~~lQ~ 74 (76)
T 2k9l_A 30 EQELALELLNYLNEKGFLSKSVEEISDVLRCSVEELEKVRQKVLR 74 (76)
T ss_dssp SHHHHHHHHHHCTTSSTTCCCHHHHHHHHTSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCCCCCHHHHHHHcCCCHHHHHHHHHHHhc
Confidence 45678888888999999875422 4666666666655443
No 66
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=20.22 E-value=45 Score=25.81 Aligned_cols=25 Identities=28% Similarity=0.328 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHhhhcceEEEEccCC
Q 042664 2 SAQELEKLRSVLSSWGCFQAINHGI 26 (213)
Q Consensus 2 ~~~~~~~l~~A~~~~Gff~l~~hgi 26 (213)
+.++++.+.+++.+.-.+.|.|||+
T Consensus 168 ~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 168 DLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp CHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CHHHHHHHHHHhCcCCEEEEcCCce
Confidence 5678899999999999999999985
No 67
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=20.05 E-value=1.8e+02 Score=22.39 Aligned_cols=36 Identities=14% Similarity=0.083 Sum_probs=31.3
Q ss_pred HHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHh
Q 042664 6 LEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQF 41 (213)
Q Consensus 6 ~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~f 41 (213)
.+++.+.+++.|.-.++.-|++.+..+++.+.++.+
T Consensus 19 ~~~vl~~a~~~gV~~~v~~g~~~~~~~~~~~la~~~ 54 (287)
T 3rcm_A 19 QAAIVERALEAGVTQMLLTGTSLAVSEQALELCQQL 54 (287)
T ss_dssp HHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHhC
Confidence 567888889999999999999999999999988775
No 68
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=20.04 E-value=2.4e+02 Score=20.00 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhhhcceEEEEc-cCCCHHHHHHHHHHHHH
Q 042664 3 AQELEKLRSVLSSWGCFQAIN-HGIEPAFLDKVKAVGRQ 40 (213)
Q Consensus 3 ~~~~~~l~~A~~~~Gff~l~~-hgi~~~~~~~~~~~~~~ 40 (213)
.+..++|.+.++++..++|.+ +|++...+..+....++
T Consensus 9 ~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 9 ELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 357788999999999888887 48998777766665553
Done!