BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042677
(504 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 235/517 (45%), Gaps = 80/517 (15%)
Query: 2 FPGPLINCSTDDMIHVNVFNKMD-EPLLFTWNGIQQRLNSWQDGVSG-TNCPIQPGTNWT 59
FPGP I + D + V + NK+ E ++ W+GI QR W DG + + C I PG +
Sbjct: 31 FPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFF 90
Query: 60 YVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQES 119
Y F T D G+FFY + Q++ G +G + ++ PF + E +LL+ DW+ +S
Sbjct: 91 YNF-TVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQS 148
Query: 120 Y--KEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHES-----------------F 160
+E+ K ++W P +L+NG+ +++S F
Sbjct: 149 IHKQEVGLSSKPIRW--IGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIF 206
Query: 161 TVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLV 220
V+ KTYR RI++ + NF I NH++++VE +G+Y +D++ G+SYSVL+
Sbjct: 207 HVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLI 266
Query: 221 TADKNPAD-YYIVASPKLSHADANSSIYGVAVLHY--DNSTTPPIGIPPK--GLDPFNLQ 275
T D+NP++ Y++ + H + G+ +L+Y ++ + P PP+ D F
Sbjct: 267 TTDQNPSENYWVSVGTRARHPNTPP---GLTLLNYLPNSVSKLPTSPPPQTPAWDDF--- 320
Query: 276 LSIDQAKDIRGCFVNSYHRNTRNILTYFSEINATFTYLRSKVMRSLAG-IDGAPLYTVNN 334
D++K+ T I + R + + I+G + +N+
Sbjct: 321 ---DRSKNF-----------TYRITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAIND 366
Query: 335 VSYLTPETPLKLADKFANGSGV------------YELDKFPVNASNVDAIRGVFVATGIH 382
VS P TP A K+ Y++D P N + G++
Sbjct: 367 VSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEK-------TRIGNGVY 419
Query: 383 RGWI-EIV---------LKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVV 432
+ I E+V +K L WHL G F+ +GYG G ++ + S NL +P +
Sbjct: 420 QFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPL 479
Query: 433 RSTVQVYPGAWTAVYAYLDNPGMWNLRSQLLKNWHLG 469
R+TV ++P WTA+ DNPG+W + + H+G
Sbjct: 480 RNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMG 516
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 187/497 (37%), Gaps = 91/497 (18%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQPGTN 57
GPLI +D +NV N +D P + W+G+ QR +W DG G N CPI PG
Sbjct: 33 GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHA 92
Query: 58 WTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFD----LLIG 113
+ Y F G+F+Y Q G GP+ I + N P E D + +
Sbjct: 93 FLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDD---NDPHAALYDEDDENTIITLA 149
Query: 114 DWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRIS 173
DWY I+ + PD L+NGK + E V +GK YR R+
Sbjct: 150 DWYHIPAPSIQGAAQ---------PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLI 200
Query: 174 NVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233
++ ++ F I H + ++E +G T +D L + GQ YS ++ A++ +Y+I A
Sbjct: 201 SLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRA 260
Query: 234 SP-KLSHADANSSIYGV--AVLHYDNST----TPPIGIPPKGLDPFNLQLSIDQAKDIRG 286
P K + A + GV A+L Y + T P L+ +L ID A
Sbjct: 261 QPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDPAA---- 316
Query: 287 CFVNSYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKL 346
A LR ++ G G +T+N +Y +P P L
Sbjct: 317 --------------PGIPTPGAADVNLRFQL-----GFSGG-RFTINGTAYESPSVPTLL 356
Query: 347 --------ADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELEVID 398
A+ VYEL + V V+ + V G H
Sbjct: 357 QIMSGAQSANDLLPAGSVYELPRNQV----VELVVPAGVLGGPH---------------- 396
Query: 399 SWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQV-YPGAWTAVYAYLDNPGMWN 457
+HL G F V S YN +PV R V + G + DNPG W
Sbjct: 397 PFHLHGHAFSVV-------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWF 449
Query: 458 LRSQLLKNWHLGQELYV 474
+ +HL L +
Sbjct: 450 FHCHI--EFHLMNGLAI 464
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 187/497 (37%), Gaps = 91/497 (18%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQPGTN 57
GPLI +D +NV N +D P + W+G+ QR +W DG G N CPI PG
Sbjct: 33 GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHA 92
Query: 58 WTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFD----LLIG 113
+ Y F G+F+Y Q G GP+ I + N P E D + +
Sbjct: 93 FLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDD---NDPHAALYDEDDENTIITLA 149
Query: 114 DWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRIS 173
DWY I+ + PD L+NGK + E V +GK YR R+
Sbjct: 150 DWYHIPAPSIQGAAQ---------PDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLI 200
Query: 174 NVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233
++ ++ F I H + ++E +G T +D L + GQ YS ++ A++ +Y+I A
Sbjct: 201 SLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRA 260
Query: 234 SP-KLSHADANSSIYGV--AVLHYDNST----TPPIGIPPKGLDPFNLQLSIDQAKDIRG 286
P K + A + GV A+L Y + T P L+ +L ID A
Sbjct: 261 QPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDPAA---- 316
Query: 287 CFVNSYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKL 346
A LR ++ G G +T+N +Y +P P L
Sbjct: 317 --------------PGIPTPGAADVNLRFQL-----GFSGG-RFTINGTAYESPSVPTLL 356
Query: 347 --------ADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELEVID 398
A+ VYEL + V V+ + V G H
Sbjct: 357 QIMSGAQSANDLLPAGSVYELPRNQV----VELVVPAGVLGGPH---------------- 396
Query: 399 SWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQV-YPGAWTAVYAYLDNPGMWN 457
+HL G F V S YN +PV R V + G + DNPG W
Sbjct: 397 PFHLHGHAFSVV-------RSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWF 449
Query: 458 LRSQLLKNWHLGQELYV 474
+ +HL L +
Sbjct: 450 FHCHI--EFHLMNGLAI 464
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 131/267 (49%), Gaps = 22/267 (8%)
Query: 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQP 54
+FP PLI + D +N+ N+M + W+G Q+ +W DG + N CPI
Sbjct: 30 VFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAFINQCPIAS 89
Query: 55 GTNWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLL-IG 113
G ++ Y FQ Q G+F+Y ++ Q G GP + + + + E ++ +
Sbjct: 90 GNSFLYDFQVPGQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHANLYDVDDESTVITLA 149
Query: 114 DWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRIS 173
DWY + K + + K D L+NG + T + +VTKGK YRFR+
Sbjct: 150 DWYHVAAK-LGPRFPKGA-------DSTLINGLGRSTSTPTADLAVISVTKGKRYRFRLV 201
Query: 174 NVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233
++ ++ F I +H++ ++E +G T + +DS+ + Q YS ++ A+++ +Y+I A
Sbjct: 202 SLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQDVDNYWIRA 261
Query: 234 SPKL---SHADANSSIYGVAVLHYDNS 257
+P AD +S A+L YD++
Sbjct: 262 NPNFGTTGFADGVNS----AILRYDDA 284
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 28/268 (10%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQPGT 56
PGPL+ + D +NV + + + W+G Q+ +W DG + N CPI PG
Sbjct: 32 PGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPAFINQCPISPGH 91
Query: 57 NWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFD------- 109
++ Y FQ +Q G+F+Y ++ Q G GP + + P + +D
Sbjct: 92 SFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYD------PNDPHASRYDVDNDDTV 145
Query: 110 LLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYR 169
+ + DWY + K+ + D L+NGK + + E VTKGK R
Sbjct: 146 ITLADWYHTA--------AKLGPRFPAGADATLINGKGRAPSDTSAELSVIKVTKGKRXR 197
Query: 170 FRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADY 229
FR+ ++ +F F I H + ++E + S + + +DS+ + Q YS ++ A++ +Y
Sbjct: 198 FRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNANQAVDNY 257
Query: 230 YIVASPKLSHADANSSIYGVAVLHYDNS 257
+I A+P + N I A+L YD +
Sbjct: 258 WIRANPNFGNVGFNGGI-NSAILRYDGA 284
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 125/268 (46%), Gaps = 28/268 (10%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQPGT 56
PGPL+ + D +NV + + + W+G Q+ +W DG + N CPI PG
Sbjct: 32 PGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPAFINQCPISPGH 91
Query: 57 NWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFD------- 109
++ Y FQ +Q G+F+Y ++ Q G GP + + P + +D
Sbjct: 92 SFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYD------PNDPHASRYDVDNDDTT 145
Query: 110 LLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYR 169
+ + DWY + K+ A+ N D L+NGK + ++ + +VTKGK R
Sbjct: 146 ITLADWYHTA--------AKLGPAFPNGADSTLINGKGRAPSDSSAQLSVVSVTKGKRXR 197
Query: 170 FRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADY 229
FR+ ++ +F F I H ++ET+ + + DS+ + Q YS + A++ +Y
Sbjct: 198 FRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTLNANQAVDNY 257
Query: 230 YIVASPKLSHADANSSIYGVAVLHYDNS 257
+I A+P + N I A+L YD +
Sbjct: 258 WIRANPNFGNVGFNGGI-NSAILRYDGA 284
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 18/265 (6%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQPGT 56
PGPLI + D +NV + + + W+G Q+ +W DG + N CPI G
Sbjct: 32 PGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPAFINQCPISSGH 91
Query: 57 NWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRI--NNRIAINVPFPKPEAEFDLLIGD 114
++ Y FQ DQ G+F+Y ++ Q G GP + N A ++ + + + + D
Sbjct: 92 SFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPAADL-YDVDNDDTVITLVD 150
Query: 115 WYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISN 174
WY + K+ A+ D L+NGK + T + +VT GK YRFR+ +
Sbjct: 151 WYHVA--------AKLGPAFPLGADATLINGKGRSPSTTTADLSVISVTPGKRYRFRLVS 202
Query: 175 VGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVAS 234
+ ++ F I H M ++ET+ T + +DS+ + Q YS ++ A++ +Y+I A+
Sbjct: 203 LSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQAVDNYWIRAN 262
Query: 235 PKLSHADANSSIYGVAVLHYDNSTT 259
P + I A+L YD +
Sbjct: 263 PNFGNVGFTGGI-NSAILRYDGAAA 286
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 28/268 (10%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQPGT 56
PGPL+ + D +NV + + + W+G Q +W DG + N CPI PG
Sbjct: 32 PGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGH 91
Query: 57 NWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFD------- 109
++ Y FQ DQ G+F+Y ++ Q G GP + + P + +D
Sbjct: 92 SFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYD------PNDPHASRYDVDNDDTV 145
Query: 110 LLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYR 169
+ + DWY + K+ + D L+NGK + + E VTKGK YR
Sbjct: 146 ITLADWYHTA--------AKLGPRFPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYR 197
Query: 170 FRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADY 229
FR+ ++ + F I H + ++E + + +++DS+ + Q YS ++ A++ +Y
Sbjct: 198 FRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNY 257
Query: 230 YIVASPKLSHADANSSIYGVAVLHYDNS 257
+I A+P + + I A+L YD +
Sbjct: 258 WIRANPNFGNVGFDGGI-NSAILRYDGA 284
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 28/268 (10%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQPGT 56
PGPL+ + D +NV + + + W+G Q +W DG + N CPI PG
Sbjct: 32 PGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGH 91
Query: 57 NWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFD------- 109
++ Y FQ DQ G+F+Y ++ Q G GP + + P + +D
Sbjct: 92 SFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYD------PNDPHASRYDVDNDDTV 145
Query: 110 LLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYR 169
+ + DWY + K+ + D L+NGK + + E VTKGK YR
Sbjct: 146 ITLADWYHTA--------AKLGPRFPGGADATLINGKGRAPSDSVAELSVIKVTKGKRYR 197
Query: 170 FRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADY 229
FR+ ++ + F I H + ++E + + +++DS+ + Q YS ++ A++ +Y
Sbjct: 198 FRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNY 257
Query: 230 YIVASPKLSHADANSSIYGVAVLHYDNS 257
+I A+P + + I A+L YD +
Sbjct: 258 WIRANPNFGNVGFDGGI-NSAILRYDGA 284
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 28/267 (10%)
Query: 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQP 54
+FPGPLI + D +NV + + + W+G+ Q +W DG + N CPI
Sbjct: 30 VFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGLFQHGTNWADGPAFVNQCPIAS 89
Query: 55 GTNWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFD----- 109
G ++ Y F DQ G+F+Y ++ Q G GP+ + + P + +D
Sbjct: 90 GNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYD------PSDPYASMYDVDDDT 143
Query: 110 --LLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKT 167
+ + DWY + K+ A+ D +L+NG N ++ TV + K
Sbjct: 144 TVITLSDWYHTA--------AKLGPAFPPNADSVLINGLGRFAGGNASDLAVITVEQNKR 195
Query: 168 YRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPA 227
YRFR+ ++ +F F I H M ++E +G +++DS+ + Q YS ++ A ++
Sbjct: 196 YRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQRYSFVLNATQSVD 255
Query: 228 DYYIVASPKLSHADANSSIYGVAVLHY 254
+Y+I A P D + A+L Y
Sbjct: 256 NYWIRAIPNTGTIDTTGGLNS-AILRY 281
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 197/503 (39%), Gaps = 81/503 (16%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDE-PLLFTWNGIQQRLNSWQDGVSG-TNCPIQPGTNWTY 60
PGP I D + ++V N ++ W+GI+Q + DGV G T CPI PG TY
Sbjct: 96 PGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTY 155
Query: 61 VFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIG-----DW 115
FQ Q G+ +Y + Q G FGP+ IN A++D +G DW
Sbjct: 156 KFQVT-QYGTTWYHSHFSLQYGDGLFGPLIING---------PATADYDEDVGVIFLQDW 205
Query: 116 YQESYKEIRSKMKKMQWAYFNPP--DWMLMNGKVSL-----MNPNTT---EHESFTVTKG 165
ES EI + PP + LMNG + +PN + T +G
Sbjct: 206 AHESVFEIWDTARLGA-----PPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEG 260
Query: 166 KTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKN 225
YR R+ NVG F F I NH + ++ + D+L + +GQ Y V+V A+
Sbjct: 261 TKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAA 320
Query: 226 PADYYIVASPKLSHADANSSIYGVAVLHYDNSTTP---PIGIPPKGL--DPFNLQLSIDQ 280
+Y+I + + + N + +L YD+S+ +G P+G D L
Sbjct: 321 ADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGTCEDEPVASLVPHL 380
Query: 281 AKDIRGCFVNSYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTP 340
A D+ G Y + + F+ FT+ + L L NN +
Sbjct: 381 ALDVGG-----YSLVDEQVSSAFTNY---FTWTINSSSLLLDWSSPTTLKIFNNETIFPT 432
Query: 341 ETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELEVIDSW 400
E NV A+ T + W+ V++ +L W
Sbjct: 433 E-------------------------YNVVALE----QTNANEEWVVYVIE-DLTGFGIW 462
Query: 401 ---HLDGFGFYTVGYGIGDWNP-QLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456
HL G F+ V +N + +++NL +P R + + A+ LDNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 457 NLRSQLLKNWHLGQELYVRVYDA 479
L + WH + L ++ ++
Sbjct: 523 LLHCHIA--WHASEGLAMQFVES 543
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 187/491 (38%), Gaps = 87/491 (17%)
Query: 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQP 54
+FP PLI + D +NV + M + W+G Q +W DG + N CPI
Sbjct: 30 VFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCPIST 89
Query: 55 GTNWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFD----- 109
G + Y FQ DQ G+F+Y ++ Q G GPI + + P ++ +D
Sbjct: 90 GHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYD------PQDPHKSLYDVDDDS 143
Query: 110 --LLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKT 167
+ + DWY + K + S + D L+NG ++ + TVTKGK
Sbjct: 144 TVITLADWYHLAAK-VGSPVPTA--------DATLINGLGRSIDTLNADLAVITVTKGKR 194
Query: 168 YRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPA 227
YRFR+ ++ + F I H + ++E + +DS+ + Q YS ++ AD++
Sbjct: 195 YRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYSFVLNADQDVG 254
Query: 228 DYYIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGC 287
+Y+I A P + + + A+L YD + P+ P P L + G
Sbjct: 255 NYWIRALPNSGTRNFDGGV-NSAILRYDGAA--PVE-PTTSQTPSTNPLVESALTTLEGT 310
Query: 288 FVNSYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKL- 346
L +N F + K +T+N S+ P P+ L
Sbjct: 311 AAPGSPAPGGVDLA----LNMAFGFAGGK-------------FTINGASFTPPTVPVLLQ 353
Query: 347 --------ADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELEVID 398
D +GS VY L P NA ++ A G
Sbjct: 354 ILSGAQSAQDLLPSGS-VYSL---PANADIEISLPATAAAPGFPH--------------- 394
Query: 399 SWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQV-YPGAWTAVYAYLDNPGMWN 457
+HL G F V S YN +PV R V PG + DNPG W
Sbjct: 395 PFHLHGHTFAVV-------RSAGSSTYNYENPVYRDVVSTGSPGDNVTIRFRTDNPGPWF 447
Query: 458 LRSQLLKNWHL 468
L + ++HL
Sbjct: 448 LHCHI--DFHL 456
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 197/503 (39%), Gaps = 81/503 (16%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDE-PLLFTWNGIQQRLNSWQDGVSG-TNCPIQPGTNWTY 60
PGP I D + ++V N ++ W+GI+Q + DGV G T CPI PG TY
Sbjct: 96 PGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTY 155
Query: 61 VFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIG-----DW 115
FQ Q G+ +Y + Q G FGP+ IN A++D +G DW
Sbjct: 156 KFQVT-QYGTTWYHSHFSLQYGDGLFGPLIING---------PATADYDEDVGVIFLQDW 205
Query: 116 YQESYKEIRSKMKKMQWAYFNPP--DWMLMNGKVSL-----MNPNTT---EHESFTVTKG 165
ES EI + PP + LMNG + +PN + T +G
Sbjct: 206 AHESVFEIWDTARLGA-----PPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEG 260
Query: 166 KTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKN 225
YR R+ NVG F F I NH + ++ + D+L + +GQ Y V+V A+
Sbjct: 261 TKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAA 320
Query: 226 PADYYIVASPKLSHADANSSIYGVAVLHYDNSTTP---PIGIPPKGL--DPFNLQLSIDQ 280
+Y+I + + + N + +L YD+S+ +G P+G D L
Sbjct: 321 ADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGTCEDEPVASLVPHL 380
Query: 281 AKDIRGCFVNSYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTP 340
A D+ G Y + + F+ FT+ + L L NN +
Sbjct: 381 ALDVGG-----YSLVDEQVSSAFTNY---FTWTINSSSLLLDWSSPTTLKIFNNETIFPT 432
Query: 341 ETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELEVIDSW 400
E NV A+ T + W+ V++ +L W
Sbjct: 433 E-------------------------YNVVALE----QTNANEEWVVYVIE-DLTGFGIW 462
Query: 401 ---HLDGFGFYTVGYGIGDWNP-QLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456
HL G F+ V +N + +++NL +P R + + A+ LDNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 457 NLRSQLLKNWHLGQELYVRVYDA 479
L + WH + + ++ ++
Sbjct: 523 LLHCHIA--WHASEGMAMQFVES 543
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 185/485 (38%), Gaps = 75/485 (15%)
Query: 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQP 54
+FP PLI + D +NV + M + W+G Q +W DG + N CPI
Sbjct: 30 VFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCPIST 89
Query: 55 GTNWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLL-IG 113
G + Y FQ DQ G+F+Y ++ Q G GPI + + + + + ++ +
Sbjct: 90 GHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVDDDSTVITLA 149
Query: 114 DWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRIS 173
DWY + K + + + D L+NG + TVTKGK YRFR+
Sbjct: 150 DWYHLAAK-VGAPVPTA--------DATLINGLGRSAATLAADLAVITVTKGKRYRFRLV 200
Query: 174 NVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233
++ ++ F I H + ++E + +DSL + Q YS ++ AD++ +Y+I A
Sbjct: 201 SLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVDNYWIRA 260
Query: 234 SPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYH 293
P S + A+L YD + P+ P P L ++G
Sbjct: 261 LPN-SGTQNFAGGTNSAILRYDGAA--PVE-PTTSQTPSTNPLVESALTTLKGTAAPGSP 316
Query: 294 RNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKL------- 346
L +N F + +T+N S+ P P+ L
Sbjct: 317 TPGGVDL----ALNMAFGFAGGN-------------FTINGASFTPPTVPVLLQILSGAQ 359
Query: 347 --ADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELEVIDSWHLDG 404
AD GS VY L P NA I AT G+ +HL G
Sbjct: 360 SAADLLPAGS-VYSL---PANAD----IEISLPATAAAPGFPH-----------PFHLHG 400
Query: 405 FGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQV-YPGAWTAVYAYLDNPGMWNLRSQLL 463
F V S YN +PV R V PG + DNPG W L +
Sbjct: 401 HVFAVV-------RSAGSSTYNYANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHI- 452
Query: 464 KNWHL 468
++HL
Sbjct: 453 -DFHL 456
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 185/485 (38%), Gaps = 75/485 (15%)
Query: 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQP 54
+FP PLI + D +NV + M + W+G Q +W DG + N CPI
Sbjct: 30 VFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCPIST 89
Query: 55 GTNWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLL-IG 113
G + Y FQ DQ G+F+Y ++ Q G GPI + + + + + ++ +
Sbjct: 90 GHAFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVDDDSTVITLA 149
Query: 114 DWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRIS 173
DWY + K + + + D L+NG + TVTKGK YRFR+
Sbjct: 150 DWYHLAAK-VGAPVPTA--------DATLINGLGRSAATLAADLAVITVTKGKRYRFRLV 200
Query: 174 NVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233
++ ++ F I H + ++E + +DSL + Q YS ++ AD++ +Y+I A
Sbjct: 201 SLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVDNYWIRA 260
Query: 234 SPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYH 293
P S + A+L YD + P+ P P L ++G
Sbjct: 261 LPN-SGTQNFAGGTNSAILRYDGAA--PVE-PTTSQTPSTNPLVESALTTLKGTAAPGSP 316
Query: 294 RNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKL------- 346
L +N F + +T+N S+ P P+ L
Sbjct: 317 TPGGVDL----ALNMAFGFAGGN-------------FTINGASFTPPTVPVLLQILSGAQ 359
Query: 347 --ADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELEVIDSWHLDG 404
AD GS VY L P NA I AT G+ +HL G
Sbjct: 360 SAADLLPAGS-VYSL---PANAD----IEISLPATAAAPGFPH-----------PFHLHG 400
Query: 405 FGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQV-YPGAWTAVYAYLDNPGMWNLRSQLL 463
F V S YN +PV R V PG + DNPG W L +
Sbjct: 401 HVFAVV-------RSAGSSTYNYANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHI- 452
Query: 464 KNWHL 468
++HL
Sbjct: 453 -DFHL 456
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 208/500 (41%), Gaps = 79/500 (15%)
Query: 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG-TNCPIQP-GTNWTY 60
GP I + D + V V N + W+GI Q+ + DG +G T CPI P G TY
Sbjct: 66 GPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTY 125
Query: 61 VFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESY 120
++ + Q G+ +Y + Q G G I+IN ++ +D+ +G + Y
Sbjct: 126 RWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASL---------PYDIDLGVFPITDY 175
Query: 121 KEIRSKMKKMQWAYFNPP---DWMLMNGKVSLMNPNTTE--HESFTVTKGKTYRFRISNV 175
R+ + + N P D +L+NG + +NPNT E + + T+T GK +R RI N
Sbjct: 176 Y-YRAADDLVHFTQNNAPPFSDNVLING--TAVNPNTGEGQYANVTLTPGKRHRLRILNT 232
Query: 176 GTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYI-VAS 234
T F + NH M ++ + N + +DSL + VGQ Y V++ A + P +Y+ V
Sbjct: 233 STENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTF 292
Query: 235 PKLSHADANSSIYGVAVLHYDNSTTPPIGIPP-KGLDPFNLQL--SIDQAKDI-RGCFVN 290
+ + + + A+ HY + P G+P +G P + Q ++D + R VN
Sbjct: 293 GGQAACGGSLNPHPAAIFHYAGA---PGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVN 349
Query: 291 SYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKF 350
S+ + N L ++ T ++ ++G+ + NV + P + D
Sbjct: 350 SFVKRPDNTLPVALDLTGTPLFVWK--------VNGSDI----NVDWGKP-----IIDYI 392
Query: 351 ANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELE----VIDSWHLDGFG 406
G+ Y + N VDA+ W +++N+ E + HL G
Sbjct: 393 LTGNTSYPVSD---NIVQVDAV----------DQWTYWLIENDPEGPFSLPHPMHLHGHD 439
Query: 407 FYTVGYGIGDWNPQLRSRYNLYDPVV------------RSTVQVYPGAWTAVYAYLDNPG 454
F +G P + ++DP V R T + G W + DNPG
Sbjct: 440 FLVLGRSPD--VPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPG 497
Query: 455 MWNLRSQLLKNWHLGQELYV 474
W + WH+ L V
Sbjct: 498 AWLFHCHIA--WHVSGGLSV 515
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 208/500 (41%), Gaps = 79/500 (15%)
Query: 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG-TNCPIQP-GTNWTY 60
GP I + D + V V N + W+GI Q+ + DG +G T CPI P G TY
Sbjct: 66 GPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTY 125
Query: 61 VFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESY 120
++ + Q G+ +Y + Q G G I+IN ++ +D+ +G + Y
Sbjct: 126 RWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASL---------PYDIDLGVFPITDY 175
Query: 121 KEIRSKMKKMQWAYFNPP---DWMLMNGKVSLMNPNTTE--HESFTVTKGKTYRFRISNV 175
R+ + + N P D +L+NG + +NPNT E + + T+T GK +R RI N
Sbjct: 176 Y-YRAADDLVHFTQNNAPPFSDNVLING--TAVNPNTGEGQYANVTLTPGKRHRLRILNT 232
Query: 176 GTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYI-VAS 234
T F + NH M ++ + N + +DSL + VGQ Y V++ A + P +Y+ V
Sbjct: 233 STENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTF 292
Query: 235 PKLSHADANSSIYGVAVLHYDNSTTPPIGIPP-KGLDPFNLQL--SIDQAKDI-RGCFVN 290
+ + + + A+ HY + P G+P +G P + Q ++D + R VN
Sbjct: 293 GGQAACGGSLNPHPAAIFHYAGA---PGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVN 349
Query: 291 SYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKF 350
S+ + N L ++ T ++ ++G+ + NV + P + D
Sbjct: 350 SFVKRPDNTLPVALDLTGTPLFVWK--------VNGSDI----NVDWGKP-----IIDYI 392
Query: 351 ANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELE----VIDSWHLDGFG 406
G+ Y + N VDA+ W +++N+ E + HL G
Sbjct: 393 LTGNTSYPVSD---NIVQVDAV----------DQWTYWLIENDPEGPFSLPHPMHLHGHD 439
Query: 407 FYTVGYGIGDWNPQLRSRYNLYDPVV------------RSTVQVYPGAWTAVYAYLDNPG 454
F +G P + ++DP V R T + G W + DNPG
Sbjct: 440 FLVLGRSPD--VPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPG 497
Query: 455 MWNLRSQLLKNWHLGQELYV 474
W + WH+ L V
Sbjct: 498 AWLFHCHIA--WHVSGGLSV 515
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 208/500 (41%), Gaps = 79/500 (15%)
Query: 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG-TNCPIQP-GTNWTY 60
GP I + D + V V N + W+GI Q+ + DG +G T CPI P G TY
Sbjct: 66 GPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTY 125
Query: 61 VFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESY 120
++ + Q G+ +Y + Q G G I+IN ++ +D+ +G + Y
Sbjct: 126 RWRAR-QYGTSWYHSHFSAQYGNGVVGTIQINGPASL---------PYDIDLGVFPITDY 175
Query: 121 KEIRSKMKKMQWAYFNPP---DWMLMNGKVSLMNPNTTE--HESFTVTKGKTYRFRISNV 175
R+ + + N P D +L+NG + +NPNT E + + T+T GK +R RI N
Sbjct: 176 Y-YRAADDLVHFTQNNAPPFSDNVLING--TAVNPNTGEGQYANVTLTPGKRHRLRILNT 232
Query: 176 GTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYI-VAS 234
T F + NH M ++ + N + +DSL + VGQ Y V++ A + P +Y+ V
Sbjct: 233 STENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTF 292
Query: 235 PKLSHADANSSIYGVAVLHYDNSTTPPIGIPP-KGLDPFNLQL--SIDQAKDI-RGCFVN 290
+ + + + A+ HY + P G+P +G P + Q ++D + R VN
Sbjct: 293 GGQAACGGSLNPHPAAIFHYAGA---PGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVN 349
Query: 291 SYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKF 350
S+ + N L ++ T ++ ++G+ + NV + P + D
Sbjct: 350 SFVKRPDNTLPVALDLTGTPLFVWK--------VNGSDI----NVDWGKP-----IIDYI 392
Query: 351 ANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELE----VIDSWHLDGFG 406
G+ Y + N VDA+ W +++N+ E + HL G
Sbjct: 393 LTGNTSYPVSD---NIVQVDAV----------DQWTYWLIENDPEGPFSLPHPMHLHGHD 439
Query: 407 FYTVGYGIGDWNPQLRSRYNLYDPVV------------RSTVQVYPGAWTAVYAYLDNPG 454
F +G P + ++DP V R T + G W + DNPG
Sbjct: 440 FLVLGRSPD--VPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPG 497
Query: 455 MWNLRSQLLKNWHLGQELYV 474
W + WH+ L V
Sbjct: 498 AWLFHCHIA--WHVSGGLSV 515
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 198/490 (40%), Gaps = 77/490 (15%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLL-----FTWNGIQQRLNSWQDGVSGTN-CPIQPGTN 57
PLI + DD +NV +++ + + W+G Q + DG + N CPI P +
Sbjct: 54 APLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNES 113
Query: 58 WTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVP----FPKPEAEFDLLIG 113
+ Y F Q G+++Y ++ Q G G + + N P + +A + I
Sbjct: 114 FVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDP---NDPHLSLYDVDDASTVITIA 170
Query: 114 DWYQESYKEIRSKMKKMQWAYFNPPDWMLMNG-KVSLMNPNTTEHESFTVTKGKTYRFRI 172
DWY + + + PD L+NG + NP+ + +V GK YRFRI
Sbjct: 171 DWYHS----LSTVLFPNPNKAPPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRI 226
Query: 173 SNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIV 232
+ ++ F I HRM ++E +G + +DSL + GQ YSV+V A++ +Y+I
Sbjct: 227 VSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIR 286
Query: 233 ASPKLSH----ADANSSIY---GVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIR 285
A+P NS+I+ G AV S N ++++A I
Sbjct: 287 ANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQ--------------NSGTALNEANLIP 332
Query: 286 GCFVNSYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLK 345
+N N + ++IN L ++ R+ D +T+N ++ P P+
Sbjct: 333 --LINPGAPG--NPVPGGADIN-----LNLRIGRNATTAD----FTINGAPFIPPTVPVL 379
Query: 346 LADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELEVIDSWHLDGF 405
L SGV + D + G V + IEI + +HL G
Sbjct: 380 LQIL----SGVTNPN---------DLLPGGAVISLPANQVIEISIPGGGN--HPFHLHGH 424
Query: 406 GFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYL-DNPGMWNLRSQLLK 464
F V S YN +PV R V + G + ++ DNPG W L +
Sbjct: 425 NFDVV-------RTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHI-- 475
Query: 465 NWHLGQELYV 474
+WHL L V
Sbjct: 476 DWHLEAGLAV 485
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 189/486 (38%), Gaps = 77/486 (15%)
Query: 2 FPGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSG-TNCPIQPG 55
FPGP+I + D + FN++ E + W+G Q+ +W DG + T CPI G
Sbjct: 32 FPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVG 91
Query: 56 TNWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLL-IGD 114
+++Y F G+++Y + Q G GP + + + + + ++ + D
Sbjct: 92 NSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLAD 151
Query: 115 WYQESYKEIRSKMKKMQWAYFNPPDWMLMNG-KVSLMNPNTTEHESFTVTKGKTYRFRIS 173
WY KE+ + D L++G + +N TV GK YR R+
Sbjct: 152 WYHVLAKEMGAGGAITA-------DSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLV 204
Query: 174 NVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233
++ +++F I H M ++ET+G + ++ +D + + Q YS ++ A++ +Y+I A
Sbjct: 205 SISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRA 264
Query: 234 SPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNS-Y 292
+P + I A+L YD +TT DP + ++ C + +
Sbjct: 265 NPNSGGEGFDGGINS-AILRYDGATT---------ADPVTVASTVHTK-----CLIETDL 309
Query: 293 HRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKL------ 346
H +RN + L + + + +N VS+ P P+ L
Sbjct: 310 HPLSRNGVPGNPHQGGADCNLNLSLGFACGN------FVINGVSFTPPTVPVLLQICSGA 363
Query: 347 ---ADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELEVIDSWHLD 403
AD +GS + P N S ++ A G H +HL
Sbjct: 364 NTAADLLPSGSVI----SLPSN-STIEIALPAGAAGGPH----------------PFHLH 402
Query: 404 GFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYP-GAWTAVYAYLDNPGMWNLRSQL 462
G F S N DP+ R V + G + DNPG W L +
Sbjct: 403 GHDFAVS-------ESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHI 455
Query: 463 LKNWHL 468
+WHL
Sbjct: 456 --DWHL 459
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 28/268 (10%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQPGT 56
P PLI + D +NV +++ + W+G Q+ +W DG + N CPI G
Sbjct: 32 PAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWADGPAFVNQCPIASGH 91
Query: 57 NWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDL------ 110
++ Y FQ DQ G+F+Y ++ Q G GP + + P + +D+
Sbjct: 92 SFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYD------PNDPHASLYDIDNDDTV 145
Query: 111 -LIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYR 169
+ DWY + K+ + D L+NG ++ VT+GK YR
Sbjct: 146 ITLADWYHVA--------AKLGPRFPFGSDSTLINGLGRTTGIAPSDLAVIKVTQGKRYR 197
Query: 170 FRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADY 229
FR+ ++ + F I NH M ++E + T +++DS+ + Q YS ++ A + +Y
Sbjct: 198 FRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLDASQPVDNY 257
Query: 230 YIVASPKLSHADANSSIYGVAVLHYDNS 257
+I A+P + I A+L YD +
Sbjct: 258 WIRANPAFGNTGFAGGI-NSAILRYDGA 284
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 27/250 (10%)
Query: 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQP 54
+FP PLI D +NV + + + W+G Q +W DG + N CPI
Sbjct: 30 VFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQCPIAS 89
Query: 55 GTNWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFD----- 109
G ++ Y F DQ G+F+Y ++ Q G GP + + P + +D
Sbjct: 90 GHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYD------PKDPHASRYDVDNES 143
Query: 110 --LLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKT 167
+ + DWY + ++ + D L+NG + T V GK
Sbjct: 144 TVITLTDWYHTA--------ARLGPRFPLGADATLINGLGRSASTPTAALAVINVQHGKR 195
Query: 168 YRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPA 227
YRFR+ ++ ++ F I H + ++E +G + + +DS+ + Q YS ++ A++
Sbjct: 196 YRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVG 255
Query: 228 DYYIVASPKL 237
+Y+I A+P
Sbjct: 256 NYWIRANPNF 265
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 192/492 (39%), Gaps = 63/492 (12%)
Query: 4 GPLINCSTDDMIHVNVFNKMD-EPLLFTWNGIQQRLNSWQDGVSG-TNCPIQP-GTNWTY 60
GP I + D I V V N + W+G++Q N + DG +G T CPI P G TY
Sbjct: 107 GPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTY 166
Query: 61 VFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESY 120
F+ Q G+ +Y + Q G G I+I+ ++ P+ F L+ D+Y S
Sbjct: 167 KFRAT-QYGTSWYHSHFSAQYGNGVVGTIQIDGPASL--PYDIDLGVFPLM--DYYYRSA 221
Query: 121 KEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWS 180
E+ + Q P D +L NG + + T+T GK +R RI N T
Sbjct: 222 DEL---VHFTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTLTPGKRHRLRIINTSTDNH 278
Query: 181 FNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASPKLSHA 240
F + H M ++ T+ N + SL + VGQ Y V + A+ +Y+ +
Sbjct: 279 FQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVTFGDGLC 338
Query: 241 DANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNIL 300
++++ + A+ Y + P +P P + +D N ++
Sbjct: 339 GSSNNKFPAAIFRYQGA---PATLPTDQGLPVPNHMCLDNL-------------NLTPVV 382
Query: 301 TYFSEINATFTYLRSKVMRSLAGIDGAPLYTVN-NVSYLTPETPLKLADKFANGSGVYEL 359
T + +N F S + I G PL+ N S + + + D +G+ Y +
Sbjct: 383 TRSAPVN-NFVKRPSNTLGVTLDIGGTPLFVWKVNGSAINVDWGKPILDYVMSGNTSYPV 441
Query: 360 DKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNE-----LEVIDSWHLDGFGFYTVGYGI 414
N VDA+ W +++N+ + + HL G F +G
Sbjct: 442 SD---NIVQVDAV----------DQWTYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRS- 487
Query: 415 GDWNPQLRSRYNLYDPV-----------VRSTVQVYP-GAWTAVYAYLDNPGMWNLRSQL 462
D P R+ ++DP VR V + P G W + DNPG W +
Sbjct: 488 PDELPSAGVRH-IFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHI 546
Query: 463 LKNWHLGQELYV 474
WH+ L V
Sbjct: 547 A--WHVSGGLSV 556
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 17/242 (7%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFT-----WNGIQQRLNSWQDGVSGTN-CPIQPGT 56
PGPLI + D +NV N + + W+G Q+ +W DG + N CPI G+
Sbjct: 32 PGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGPAFVNQCPIAAGS 91
Query: 57 NWTYVFQTKDQIGSFFYFPSINFQKAGGGFGPIRI--NNRIAINVPFPKPEAEFDLLIGD 114
++ Y F T Q G+F+Y ++ Q G GP + N + N+ + + + D
Sbjct: 92 SFLYDFSTPIQAGTFWYHSHLSTQYCDGDRGPFVVYDPNDPSANL-YDVDNLNTVITLTD 150
Query: 115 WYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISN 174
WY + + +K D L+NG+ + + + +VT GK YRFR+ +
Sbjct: 151 WYHTAAQNGPAKPGGA--------DATLINGQGRGPSSPSADLAVISVTAGKRYRFRLVS 202
Query: 175 VGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVAS 234
++ F I H+M +++ + + + + ++ Q YS ++ A++ +Y+I A+
Sbjct: 203 NSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSFILNANQAVNNYWIRAN 262
Query: 235 PK 236
P
Sbjct: 263 PN 264
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 193/490 (39%), Gaps = 76/490 (15%)
Query: 2 FPGPLINCSTDDMIHVNVFNKMDEP-LLFTWNGIQQRLNSWQDGVSG-TNCPIQPGTNWT 59
FP P I + D + + + N M+ ++G+ Q + DGV T CPI PG+
Sbjct: 31 FPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTML 90
Query: 60 YVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQES 119
Y F +G+++Y + Q G G I + + P+ E E L + +WY +
Sbjct: 91 YNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDD---SFPYDYDE-ELSLSLSEWYHD- 145
Query: 120 YKEIRSKMKKMQWAYFNP------PDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRIS 173
+ + + K + +NP P +++N ++L ++ V TY RI
Sbjct: 146 ---LVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMNL---------TWEVQPDTTYLLRIV 193
Query: 174 NVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLV----TADKNPADY 229
NVG S F I++H M +VE +G T K D L + V Q Y+VLV DKN A
Sbjct: 194 NVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIM 253
Query: 230 YIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFV 289
L ++ + + + Y+ + P N SID F+
Sbjct: 254 QKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQ---------NYVDSIDN-------FL 297
Query: 290 NSYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADK 349
+ ++ + E + T VM +L +G NN++Y P+ P L
Sbjct: 298 DDFYLQPYEKEAIYGEPDHVITV--DVVMDNLK--NGVNYAFFNNITYTAPKVP-TLMTV 352
Query: 350 FANGSGVYELDKFPVNASNVDAIRGVFVATGI--HRGWIEIVLKNELEVIDSWHLDGFGF 407
++G + +N I G T I +EIVL N+ +HL G F
Sbjct: 353 LSSG-----------DQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTHPFHLHGHAF 401
Query: 408 YTV----------GYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWN 457
T+ G ++P + Y P+ R T+ V P + + DNPG+W
Sbjct: 402 QTIQRDRTYDDALGEVPHSFDPDNHPAFPEY-PMRRDTLYVRPQSNFVIRFKADNPGVWF 460
Query: 458 LRSQLLKNWH 467
+ WH
Sbjct: 461 FHCHI--EWH 468
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 24/230 (10%)
Query: 2 FPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYV 61
FPGP + D + + + N++ EP W+G+ V I PG +WTY
Sbjct: 44 FPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGL-----PISPKVDDPFLEIPPGESWTYE 98
Query: 62 FQT-KDQIGSFFYFPSINFQKA----GGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWY 116
F K+ G+F+Y P ++ + A G G + + + + +P + E L++ D
Sbjct: 99 FTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLD-AIPELREAEEHLLVLKDLA 157
Query: 117 QESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVG 176
+ + + M W D +L+NG + P V + T R R+ N
Sbjct: 158 LQGGRP--APHTPMDWMNGKEGDLVLVNGA---LRPT-------LVAQKATLRLRLLNAS 205
Query: 177 TAWSFNFRIQNHRMVLVETEGSYTNK-IKLDSLDVHVGQSYSVLVTADKN 225
A + +Q+H + L+ +G + + +++ L + G+ VLV K
Sbjct: 206 NARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRKE 255
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQ-DGV-SGTNCPIQPGTNWTY 60
P PLI+ D + VNV N P W+G+ QR +WQ DGV T I+PG +TY
Sbjct: 32 PAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQR-GTWQSDGVPHATQHAIEPGDTFTY 90
Query: 61 VFQTKDQIGSFFYFPSINFQK---AGGGFGPIRIN--NRIAINVPFPKPEAEFDLLIGDW 115
F+ + G+ +Y +N + G +GP+ + N + I K ++ L++ DW
Sbjct: 91 KFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTK---DYILMLSDW 146
Query: 116 YQESYKEIRSKMKKMQWAYFNPPDWMLMNGKV----SLMNPNTTEHESFTVTKGKTYRFR 171
WA N P + G V ++ + E + V KG R R
Sbjct: 147 VS-------------SWA--NKPGEGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLR 191
Query: 172 ISNVGTAWSFNFRIQNHRMVLVETEGSYTNK-IKLDSLDVHVGQSYSVLVTADKNPADYY 230
+ G H + +G +K IK D++ + G+ Y V++ D NP +
Sbjct: 192 LIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMD-NPGLWM 249
Query: 231 I 231
I
Sbjct: 250 I 250
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 18/227 (7%)
Query: 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTY 60
+ P P I D + + V NK+ E W+G+ + QDG + PI G Y
Sbjct: 78 LVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVP--VPPDQDG--SPHDPILAGEERIY 133
Query: 61 VFQT-KDQIGSFFYFPSINFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQES 119
F+ +D G+++Y P ++ + F + I E DL+I D +
Sbjct: 134 RFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDE 193
Query: 120 YKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAW 179
+I + W +++L+NG+ P + R RI N A
Sbjct: 194 NAQIPNNNLN-DWLNGREGEFVLINGQ---FKP--------KIKLATNERIRIYNATAAR 241
Query: 180 SFNFRIQNHRMVLVETEGSYTNK-IKLDSLDVHVGQSYSVLVTADKN 225
N RIQ + +LV T+G K I + L + VL+ A K+
Sbjct: 242 YLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPKD 288
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 2 FPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYV 61
PGPLI + D +H+ N MD P+ +G+ ++S DG + ++PG TY
Sbjct: 39 IPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEISS--DGTKQSRSDVEPGGTRTYT 96
Query: 62 FQT 64
++T
Sbjct: 97 WRT 99
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 116/303 (38%), Gaps = 34/303 (11%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQ 63
GP + + V+++N++ E W+G++ + DG G I PG +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 TKDQIGSFFYFP----SINFQKAGGGFGPIRINNRIAINVPFPKPEA--EFDLLIGDWYQ 117
+ ++ P Q A G G + I + + + PK + +++ D
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 ESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGT 177
+ +I ++ M A D +L NG + + +G R R+ N
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGAI---------YPQHAAPRG-WLRLRLLNGCN 212
Query: 178 AWSFNFRIQNHR--MVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKN-PADYYIVAS 234
A S NF ++R V+ G +K+ L V +G+ + VLV + N P D +
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPV 272
Query: 235 PKLSHADAN-------SSIYGVAVLHY----DNSTTPPIGIPPKGLDPFNLQLSIDQAKD 283
++ A A I +A+ D ++ P +GL LQLS+D D
Sbjct: 273 SQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLD 332
Query: 284 IRG 286
+ G
Sbjct: 333 MMG 335
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 116/303 (38%), Gaps = 34/303 (11%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQ 63
GP + + V+++N++ E W+G++ + DG G I PG +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 TKDQIGSFFYFP----SINFQKAGGGFGPIRINNRIAINVPFPKPEA--EFDLLIGDWYQ 117
+ ++ P Q A G G + I + + + PK + +++ D
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 ESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGT 177
+ +I ++ M A D +L NG + + +G R R+ N
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGAI---------YPQHAAPRG-WLRLRLLNGCN 212
Query: 178 AWSFNFRIQNHR--MVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKN-PADYYIVAS 234
A S NF ++R V+ G +K+ L V +G+ + VLV + N P D +
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPV 272
Query: 235 PKLSHADAN-------SSIYGVAVLHY----DNSTTPPIGIPPKGLDPFNLQLSIDQAKD 283
++ A A I +A+ D ++ P +GL LQLS+D D
Sbjct: 273 SQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLD 332
Query: 284 IRG 286
+ G
Sbjct: 333 MMG 335
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 116/303 (38%), Gaps = 34/303 (11%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQ 63
GP + + V+++N++ E W+G++ + DG G I PG +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 TKDQIGSFFYFP----SINFQKAGGGFGPIRINNRIAINVPFPKPEA--EFDLLIGDWYQ 117
+ ++ P Q A G G + I + + + PK + +++ D
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 ESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGT 177
+ +I ++ M A D +L NG + + +G R R+ N
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGAI---------YPQHAAPRG-WLRLRLLNGCN 212
Query: 178 AWSFNFRIQNHR--MVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKN-PADYYIVAS 234
A S NF ++R V+ G +K+ L V +G+ + VLV + N P D +
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPV 272
Query: 235 PKLSHADAN-------SSIYGVAVLHY----DNSTTPPIGIPPKGLDPFNLQLSIDQAKD 283
++ A A I +A+ D ++ P +GL LQLS+D D
Sbjct: 273 SQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLD 332
Query: 284 IRG 286
+ G
Sbjct: 333 MMG 335
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 116/303 (38%), Gaps = 34/303 (11%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQ 63
GP + + V+++N++ E W+G++ + DG G I PG +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 TKDQIGSFFYFP----SINFQKAGGGFGPIRINNRIAINVPFPKPEA--EFDLLIGDWYQ 117
+ ++ P Q A G G + I + + + PK + +++ D
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 ESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGT 177
+ +I ++ M A D +L NG + + +G R R+ N
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGAI---------YPQHAAPRG-WLRLRLLNGCN 212
Query: 178 AWSFNFRIQNHR--MVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKN-PADYYIVAS 234
A S NF ++R V+ G +K+ L V +G+ + VLV + N P D +
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPV 272
Query: 235 PKLSHADAN-------SSIYGVAVLHY----DNSTTPPIGIPPKGLDPFNLQLSIDQAKD 283
++ A A I +A+ D ++ P +GL LQLS+D D
Sbjct: 273 SQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLD 332
Query: 284 IRG 286
+ G
Sbjct: 333 MMG 335
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 116/304 (38%), Gaps = 34/304 (11%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQ 63
GP + + V+++N++ E W+G++ + DG G I PG +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 TKDQIGSFFYFP----SINFQKAGGGFGPIRINNRIAINVPFPKPEA--EFDLLIGDWYQ 117
+ ++ P Q A G G + I + + + PK + +++ D
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 ESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGT 177
+ +I ++ M A D +L NG + + +G R R+ N
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGAI---------YPQHAAPRG-WLRLRLLNGCN 212
Query: 178 AWSFNFRIQNHR--MVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKN-PADYYIVAS 234
A S NF ++R V+ G +K+ L V +G+ + VLV + N P D +
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPV 272
Query: 235 PKLSHADAN-------SSIYGVAVLHY----DNSTTPPIGIPPKGLDPFNLQLSIDQAKD 283
++ A A I +A+ D ++ P +GL LQLS+D D
Sbjct: 273 SQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLD 332
Query: 284 IRGC 287
+ G
Sbjct: 333 MMGM 336
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 96/248 (38%), Gaps = 23/248 (9%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQ 63
GP + + V+++N++ E W+G++ + DG G I PG +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 TKDQIGSFFYFP----SINFQKAGGGFGPIRINNRIAINVPFPKPEA--EFDLLIGDWYQ 117
+ ++ P Q A G G + I + + + PK + +++ D
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 ESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGT 177
+ +I ++ M A D +L NG + + +G R R+ N
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGAI---------YPQHAAPRG-WLRLRLLNGCN 212
Query: 178 AWSFNFRIQNHR--MVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKN-PADYYIVAS 234
A S NF ++R V+ G +K+ L V +G+ + VLV + N P D +
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPV 272
Query: 235 PKLSHADA 242
++ A A
Sbjct: 273 SQMGMAIA 280
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 116/304 (38%), Gaps = 34/304 (11%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQ 63
GP + + V+++N++ E W+G++ + DG G I PG +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 TKDQIGSFFYFP----SINFQKAGGGFGPIRINNRIAINVPFPKPEA--EFDLLIGDWYQ 117
+ ++ P Q A G G + I + + + PK + +++ D
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 ESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGT 177
+ +I ++ M A D +L NG + + +G R R+ N
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGAI---------YPQHAAPRG-WLRLRLLNGCN 212
Query: 178 AWSFNFRIQNHR--MVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKN-PADYYIVAS 234
A S NF ++R V+ G +K+ L V +G+ + VLV + N P D +
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPV 272
Query: 235 PKLSHADAN-------SSIYGVAVLHY----DNSTTPPIGIPPKGLDPFNLQLSIDQAKD 283
++ A A I +A+ D ++ P +GL LQLS+D D
Sbjct: 273 SQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLD 332
Query: 284 IRGC 287
+ G
Sbjct: 333 MMGM 336
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
Length = 278
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVF 62
PGPLI + D +H+ N MD +G+ ++S DG + ++PG TY +
Sbjct: 37 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDAEISS--DGTAMNKSDVEPGGTRTYTW 94
Query: 63 QT 64
+T
Sbjct: 95 RT 96
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVF 62
PGPLI + D +H+ N MD +G+ ++S DG + ++PG TY +
Sbjct: 75 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEISS--DGTAMNKSDVEPGGTRTYTW 132
Query: 63 QT 64
+T
Sbjct: 133 RT 134
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 116/304 (38%), Gaps = 34/304 (11%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQ 63
GP + + V+++N++ E W+G++ + DG G I PG +
Sbjct: 47 GPAVKLQRGKAVTVDIYNQLTEETTLHWHGLE--VPGEVDG--GPQGIIPPGGKRSVTLN 102
Query: 64 TKDQIGSFFYFP----SINFQKAGGGFGPIRINNRIAINVPFPKPEA--EFDLLIGDWYQ 117
+ ++ P Q A G G + I + + + PK + +++ D
Sbjct: 103 VDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKF 162
Query: 118 ESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGT 177
+ +I ++ M A D +L NG + + +G R R+ N
Sbjct: 163 SADGQIDYQLDVMTAAVGWFGDTLLTNGAI---------YPQHAAPRG-WLRLRLLNGCN 212
Query: 178 AWSFNFRIQNHR--MVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKN-PADYYIVAS 234
A S NF ++R V+ G +K+ L V +G+ + VLV + N P D +
Sbjct: 213 ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPV 272
Query: 235 PKLSHADAN-------SSIYGVAVLHY----DNSTTPPIGIPPKGLDPFNLQLSIDQAKD 283
++ A A I +A+ D ++ P +GL LQLS+D + D
Sbjct: 273 SQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPSLD 332
Query: 284 IRGC 287
G
Sbjct: 333 SSGS 336
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVF 62
PGPLI + D +H+ N MD +G+ ++S DG + ++PG TY +
Sbjct: 34 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEISS--DGTAMNKSDVEPGGTRTYTW 91
Query: 63 QT 64
+T
Sbjct: 92 RT 93
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From
Streptomyces Coelicolor
Length = 279
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 3 PGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVF 62
PGPLI + D +H+ N MD +G+ ++S DG + ++PG TY +
Sbjct: 38 PGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDFEISS--DGTAMNKSDVEPGGTRTYTW 95
Query: 63 QT 64
+T
Sbjct: 96 RT 97
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 14/183 (7%)
Query: 54 PGTNWTYVFQTKDQIGSFFYFPSI---NFQKAGGGFGPIRINNRIAINVPFPKPEAEFDL 110
PG T+ F+ Q G + Y ++ A G +G I + + + PK + EF +
Sbjct: 115 PGRTSTFSFKAL-QPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGL----PKVDKEFYI 169
Query: 111 LIGDWYQESYKEIRSKMK-KMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYR 169
+ GD+Y + K + M A P++++ NG V + T + G+T R
Sbjct: 170 VQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGAL----TGDNALKAKAGETVR 225
Query: 170 FRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADY 229
+ N G +F + V EG + S V G S V D P +Y
Sbjct: 226 MYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGNY 284
Query: 230 YIV 232
+V
Sbjct: 285 TLV 287
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 107 EFDLLIGDWYQE-SYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKG 165
E+ L+ GD+Y + + E + M A D+++ NG V +TT+ S T G
Sbjct: 156 EYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVG----STTDENSLTAKVG 211
Query: 166 KTYRFRISNVGTAWSFNFRIQNHRMVLVETEG 197
+T R I N G +F + V EG
Sbjct: 212 ETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEG 243
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 19/120 (15%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQ 63
GP ++ D + + N P +G+Q S T P PG TYV++
Sbjct: 790 GPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTE--------SSTVTPTLPGETLTYVWK 841
Query: 64 TKDQIGS---------FFYFPSINFQKA--GGGFGPIRINNRIAINVPFPKPEAEFDLLI 112
++ G+ + Y+ +++ K G GP+ + R + V P+ + EF LL
Sbjct: 842 IPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLKVFNPRRKLEFALLF 901
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles
Of Various Metal Cation Binding Sites
Length = 1065
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 19/120 (15%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQ 63
GP ++ D + + N P +G+Q S T P PG TYV++
Sbjct: 809 GPQLHADVGDKVKIIFKNMATRPYSIHAHGVQTE--------SSTVTPTLPGETLTYVWK 860
Query: 64 TKDQIGS---------FFYFPSINFQKA--GGGFGPIRINNRIAINVPFPKPEAEFDLLI 112
++ G+ + Y+ +++ K G GP+ + R + V P+ + EF LL
Sbjct: 861 IPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLKVFNPRRKLEFALLF 920
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQT 64
P I + + + NK+ EP + W+G +W + + I PG ++ Y F
Sbjct: 38 PTIILRRGQRVDMTLKNKLTEPTIVHWHGFDV---NWHNDAH-PSFAITPGESYNYSFDV 93
Query: 65 KDQIGSFFYFP 75
++ G++ Y P
Sbjct: 94 VNRAGTYLYHP 104
>pdb|1O6B|A Chain A, Crystal Structure Of Phosphopantetheine
Adenylyltransferase With Adp
Length = 169
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 298 NILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANG 353
+I T+F N +++L S +++ +A DG+ ++ PE L L KF G
Sbjct: 112 SIETFFXXANNQYSFLSSSIVKEVARYDGSV------SEFVPPEVELALQQKFRQG 161
>pdb|3GGM|A Chain A, Crystal Structure Of Bt9727_2919 From Bacillus
Thuringiensis Subsp. Northeast Structural Genomics
Target Bur228b
pdb|3GGM|B Chain B, Crystal Structure Of Bt9727_2919 From Bacillus
Thuringiensis Subsp. Northeast Structural Genomics
Target Bur228b
pdb|3GGM|C Chain C, Crystal Structure Of Bt9727_2919 From Bacillus
Thuringiensis Subsp. Northeast Structural Genomics
Target Bur228b
pdb|3GGM|D Chain D, Crystal Structure Of Bt9727_2919 From Bacillus
Thuringiensis Subsp. Northeast Structural Genomics
Target Bur228b
Length = 81
Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 136 NPPDWMLMNGKVSLMNPNTTEHESFTVTKG 165
N PD +L NGK++ ++P+ E + +T G
Sbjct: 2 NVPDMILYNGKITTLDPSQPEVSAIAITDG 31
>pdb|1SDD|B Chain B, Crystal Structure Of Bovine Factor Vai
Length = 647
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNS----WQDGVS---GTNCPIQPGT 56
GP+I DD+I V N P +G+ +S ++D + IQP
Sbjct: 68 GPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEKSSEGKTYEDDSPEWFKEDNAIQPNK 127
Query: 57 NWTYVFQTKDQIG---------SFFYFPSINFQK--AGGGFGPIRINNRIAIN--VPFPK 103
+TYV+ + G ++ Y+ ++N +K G GP+ I + ++ P
Sbjct: 128 TYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPV 187
Query: 104 PEAEFDLL 111
EF LL
Sbjct: 188 DMREFVLL 195
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,399,524
Number of Sequences: 62578
Number of extensions: 742630
Number of successful extensions: 1744
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1632
Number of HSP's gapped (non-prelim): 62
length of query: 504
length of database: 14,973,337
effective HSP length: 103
effective length of query: 401
effective length of database: 8,527,803
effective search space: 3419649003
effective search space used: 3419649003
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)