Query 042677
Match_columns 504
No_of_seqs 169 out of 1597
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 14:38:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1.6E-96 5E-101 785.1 50.0 475 1-500 30-542 (552)
2 3sqr_A Laccase; multicopper ox 100.0 2.5E-93 8.6E-98 754.2 46.7 450 1-499 94-564 (580)
3 3t6v_A Laccase; beta barrel, o 100.0 7.3E-91 2.5E-95 727.5 43.4 448 1-500 31-492 (495)
4 1zpu_A Iron transport multicop 100.0 1.1E-90 3.9E-95 734.7 44.6 452 1-499 30-503 (534)
5 3pxl_A Laccase; 4-copper prote 100.0 9.2E-91 3.1E-95 726.7 43.2 446 1-500 30-492 (499)
6 1v10_A Laccase; multicopper bl 100.0 4.3E-90 1.5E-94 729.5 41.5 453 1-501 51-513 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 2.6E-89 8.8E-94 721.2 39.3 449 1-501 31-492 (503)
8 2q9o_A Laccase-1; multicopper 100.0 2.5E-88 8.7E-93 721.1 44.3 457 1-500 63-544 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 4.6E-81 1.6E-85 648.6 38.9 376 1-477 43-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 9.5E-80 3.2E-84 639.4 34.6 379 1-480 46-443 (451)
11 3aw5_A Multicopper oxidase; be 100.0 6.7E-79 2.3E-83 631.9 34.6 379 2-477 35-448 (448)
12 2wsd_A Spore coat protein A; o 100.0 9.2E-79 3.1E-83 642.3 35.2 401 1-479 54-511 (513)
13 3abg_A Bilirubin oxidase; clea 100.0 1.3E-78 4.4E-83 641.3 36.3 394 1-480 65-477 (534)
14 3zx1_A Oxidoreductase, putativ 100.0 9.2E-77 3.1E-81 616.9 38.4 382 1-478 78-481 (481)
15 3gyr_A PHS, phenoxazinone synt 100.0 1.8E-76 6.3E-81 642.0 40.2 430 1-481 61-594 (612)
16 3od3_A Blue copper oxidase CUE 100.0 1.8E-74 6E-79 599.4 33.9 391 1-476 44-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 6.4E-73 2.2E-77 601.9 45.3 422 1-480 61-593 (612)
18 2r7e_A Coagulation factor VIII 100.0 4.5E-55 1.5E-59 476.8 11.8 219 1-236 71-314 (742)
19 2j5w_A Ceruloplasmin, ferroxid 100.0 3.7E-51 1.3E-55 463.4 35.4 426 1-481 91-564 (1065)
20 3g5w_A Multicopper oxidase typ 100.0 1.1E-48 3.8E-53 387.6 22.7 242 1-258 30-278 (318)
21 2dv6_A Nitrite reductase; elec 100.0 3.3E-47 1.1E-51 396.8 29.1 371 4-480 54-435 (447)
22 2zwn_A Two-domain type laccase 100.0 5.2E-47 1.8E-51 379.7 27.4 242 1-258 31-279 (339)
23 2j5w_A Ceruloplasmin, ferroxid 100.0 1.7E-45 6E-50 417.1 22.9 385 1-480 626-1060(1065)
24 1kbv_A ANIA, major outer membr 100.0 3.3E-44 1.1E-48 357.6 23.4 235 1-258 66-309 (327)
25 3gdc_A Multicopper oxidase; be 100.0 3.4E-43 1.2E-47 344.1 25.4 207 1-236 62-273 (288)
26 3cg8_A Laccase; oxidoreductase 100.0 5.2E-43 1.8E-47 350.3 25.2 106 1-114 73-197 (343)
27 3tas_A Small laccase, multi-co 100.0 1.2E-42 4.2E-47 344.0 21.7 212 1-257 38-272 (313)
28 3t9w_A Small laccase, multi-co 100.0 1E-41 3.5E-46 334.7 21.3 212 1-257 54-288 (299)
29 3kw8_A Laccase, putative coppe 100.0 3.9E-41 1.3E-45 327.5 24.3 210 1-257 32-266 (276)
30 2zoo_A Probable nitrite reduct 100.0 2.1E-40 7.2E-45 344.6 23.7 238 1-259 56-300 (442)
31 1sdd_B Coagulation factor V; c 100.0 1.2E-40 4.3E-45 361.5 21.2 219 1-236 65-312 (647)
32 1sdd_A Coagulation factor V; c 100.0 2.8E-41 9.4E-46 333.5 10.6 208 1-236 56-285 (306)
33 1mzy_A Copper-containing nitri 100.0 2.7E-39 9.1E-44 323.7 24.7 238 1-258 60-320 (333)
34 1oe1_A Dissimilatory copper-co 100.0 5.8E-39 2E-43 321.8 22.9 241 1-259 61-321 (336)
35 2bw4_A Copper-containing nitri 100.0 4.2E-39 1.4E-43 323.4 19.2 239 1-259 67-327 (340)
36 2r7e_B Coagulation factor VIII 100.0 1.2E-39 4.1E-44 355.7 9.4 221 1-236 195-441 (770)
37 2dv6_A Nitrite reductase; elec 100.0 2.8E-36 9.5E-41 314.3 25.6 230 1-258 191-435 (447)
38 2r7e_A Coagulation factor VIII 100.0 1.3E-37 4.5E-42 339.2 6.4 217 1-236 448-696 (742)
39 3gdc_A Multicopper oxidase; be 100.0 1.1E-29 3.8E-34 248.3 18.2 232 139-478 55-288 (288)
40 2zwn_A Two-domain type laccase 100.0 7.6E-29 2.6E-33 248.0 18.6 247 139-480 24-279 (339)
41 3g5w_A Multicopper oxidase typ 100.0 1.4E-28 4.8E-33 243.4 18.2 249 139-480 23-278 (318)
42 3kw8_A Laccase, putative coppe 99.9 5.5E-27 1.9E-31 227.7 20.1 226 141-481 27-268 (276)
43 3t9w_A Small laccase, multi-co 99.9 6.6E-27 2.3E-31 229.4 18.1 218 157-481 57-290 (299)
44 3tas_A Small laccase, multi-co 99.9 6.4E-26 2.2E-30 224.1 22.7 233 157-498 41-290 (313)
45 1sdd_A Coagulation factor V; c 99.9 1.1E-24 3.9E-29 214.6 4.6 235 141-479 52-301 (306)
46 1sdd_B Coagulation factor V; c 99.9 1.7E-22 5.7E-27 219.2 17.2 243 158-478 69-327 (647)
47 1kbv_A ANIA, major outer membr 99.9 6.1E-22 2.1E-26 196.9 16.8 248 139-480 59-309 (327)
48 2bw4_A Copper-containing nitri 99.9 2.6E-21 9E-26 193.8 19.2 262 139-480 60-326 (340)
49 2r7e_B Coagulation factor VIII 99.8 3.4E-22 1.2E-26 218.3 5.4 244 157-477 198-455 (770)
50 1mzy_A Copper-containing nitri 99.8 2E-19 6.8E-24 179.5 23.8 262 139-480 53-320 (333)
51 2zoo_A Probable nitrite reduct 99.8 8.1E-19 2.8E-23 182.0 17.8 249 139-481 49-300 (442)
52 1oe1_A Dissimilatory copper-co 99.8 8.1E-18 2.8E-22 168.1 21.7 262 139-480 54-320 (336)
53 2uxt_A Protein SUFI, SUFI; oxi 99.6 3.2E-15 1.1E-19 154.8 18.7 210 3-236 191-426 (451)
54 2xu9_A Laccase; oxidoreductase 99.6 8.1E-15 2.8E-19 151.5 20.6 212 4-236 187-425 (439)
55 3cvb_A Plastocyanin; cupredoxi 99.6 1.5E-16 5E-21 131.0 3.6 88 1-93 15-105 (105)
56 1hfu_A Laccase 1; oxidoreducta 99.6 4.2E-14 1.4E-18 148.5 22.5 230 4-236 184-455 (503)
57 1v10_A Laccase; multicopper bl 99.6 2.7E-14 9.3E-19 150.5 21.0 224 5-236 212-476 (521)
58 3t6v_A Laccase; beta barrel, o 99.5 6.4E-13 2.2E-17 138.6 21.6 230 4-236 188-456 (495)
59 3pxl_A Laccase; 4-copper prote 99.5 2.6E-12 8.8E-17 134.1 20.9 231 3-236 184-456 (499)
60 1aoz_A Ascorbate oxidase; oxid 99.5 2.2E-12 7.5E-17 137.0 19.8 224 5-236 204-510 (552)
61 1zpu_A Iron transport multicop 99.4 7.4E-12 2.5E-16 132.1 23.1 229 4-236 177-466 (534)
62 3zx1_A Oxidoreductase, putativ 99.4 2.9E-12 9.8E-17 132.9 18.5 215 4-236 221-466 (481)
63 2q9o_A Laccase-1; multicopper 99.4 1.6E-11 5.6E-16 130.3 23.4 231 4-236 214-506 (559)
64 2cal_A Rusticyanin; iron respi 99.4 5.2E-13 1.8E-17 117.0 7.8 87 2-92 58-154 (154)
65 3od3_A Blue copper oxidase CUE 99.4 1.1E-11 3.8E-16 128.5 19.0 222 4-236 193-475 (488)
66 3aw5_A Multicopper oxidase; be 99.3 2.5E-11 8.4E-16 125.4 17.8 201 3-236 178-434 (448)
67 2g23_A PHS, phenoxazinone synt 99.3 1E-10 3.5E-15 124.4 18.1 224 4-236 264-576 (612)
68 2wsd_A Spore coat protein A; o 99.2 1.1E-10 3.9E-15 122.7 16.9 207 4-236 240-495 (513)
69 3cg8_A Laccase; oxidoreductase 99.2 2E-11 6.7E-16 121.7 10.1 93 3-97 207-310 (343)
70 3abg_A Bilirubin oxidase; clea 99.2 1E-10 3.5E-15 123.2 15.4 221 3-236 210-460 (534)
71 3sqr_A Laccase; multicopper ox 99.2 1.1E-09 3.8E-14 115.7 21.5 229 4-236 252-529 (580)
72 2ov0_A Amicyanin; beta-sandwic 99.2 4.1E-11 1.4E-15 98.1 8.2 75 2-92 30-105 (105)
73 2aan_A Auracyanin A; cupredoxi 99.2 1.9E-11 6.4E-16 105.6 6.3 93 377-476 36-138 (139)
74 3cvb_A Plastocyanin; cupredoxi 99.2 8.1E-11 2.8E-15 96.3 9.4 85 377-478 20-105 (105)
75 1iby_A Nitrosocyanin; RED copp 99.2 5.1E-11 1.7E-15 98.8 7.5 78 2-93 35-112 (112)
76 2gim_A Plastocyanin; beta shee 99.1 3.6E-10 1.2E-14 92.6 8.3 82 5-93 20-106 (106)
77 3gyr_A PHS, phenoxazinone synt 99.0 6.7E-09 2.3E-13 111.9 18.5 91 139-236 459-576 (612)
78 1fwx_A Nitrous oxide reductase 99.0 5.5E-10 1.9E-14 117.2 8.8 84 1-94 509-593 (595)
79 2aan_A Auracyanin A; cupredoxi 98.9 2.8E-09 9.7E-14 91.8 9.8 87 4-92 34-139 (139)
80 2gim_A Plastocyanin; beta shee 98.9 4.8E-09 1.6E-13 85.8 7.8 84 377-477 21-105 (106)
81 4hci_A Cupredoxin 1; structura 98.8 1.2E-08 4.3E-13 82.4 7.6 73 5-92 28-100 (100)
82 1qhq_A Protein (auracyanin); e 98.8 1.5E-08 5.1E-13 87.3 8.3 96 377-477 34-139 (140)
83 1qhq_A Protein (auracyanin); e 98.7 4.8E-08 1.6E-12 84.1 10.3 89 4-93 32-140 (140)
84 2plt_A Plastocyanin; electron 98.7 1.4E-08 4.6E-13 81.8 6.1 79 5-92 18-98 (98)
85 1pcs_A Plastocyanin; electron 98.7 4.8E-08 1.7E-12 78.5 8.0 80 5-92 19-98 (98)
86 1bxv_A Plastocyanin; copper pr 98.7 5.6E-08 1.9E-12 76.9 7.9 74 4-92 18-91 (91)
87 1pcs_A Plastocyanin; electron 98.7 4.5E-08 1.6E-12 78.7 7.1 78 377-476 20-97 (98)
88 2plt_A Plastocyanin; electron 98.6 1.4E-07 4.7E-12 75.8 9.5 79 377-476 19-97 (98)
89 3erx_A Pseudoazurin; copper pr 98.6 1E-07 3.5E-12 79.7 8.4 76 5-95 21-96 (123)
90 1bxv_A Plastocyanin; copper pr 98.6 1.9E-07 6.3E-12 73.9 9.0 71 377-476 20-90 (91)
91 1b3i_A PETE protein, protein ( 98.6 1.5E-07 5E-12 75.5 7.7 76 5-92 19-97 (97)
92 1iby_A Nitrosocyanin; RED copp 98.6 4.2E-07 1.4E-11 74.9 10.4 74 377-478 39-112 (112)
93 1kdj_A Plastocyanin; electron 98.5 1.7E-07 5.7E-12 75.9 7.7 79 5-92 17-102 (102)
94 1byp_A Protein (plastocyanin); 98.5 3.6E-07 1.2E-11 73.5 9.3 76 5-92 17-99 (99)
95 1plc_A Plastocyanin; electron 98.5 3.8E-07 1.3E-11 73.3 9.2 76 5-92 17-99 (99)
96 3tu6_A Pseudoazurin (blue copp 98.5 1.5E-07 5E-12 79.1 6.7 76 5-95 23-98 (127)
97 1b3i_A PETE protein, protein ( 98.5 1.1E-07 3.9E-12 76.2 4.8 77 377-476 20-96 (97)
98 3c75_A Amicyanin; copper prote 98.4 7.4E-07 2.5E-11 75.7 8.6 72 5-92 60-132 (132)
99 3ef4_A Pseudoazurin, blue copp 98.4 5.9E-07 2E-11 74.9 7.7 74 5-93 22-95 (124)
100 4hci_A Cupredoxin 1; structura 98.4 1.8E-06 6E-11 69.6 10.0 72 377-477 29-100 (100)
101 1byp_A Protein (plastocyanin); 98.4 1.5E-06 5.2E-11 69.8 8.8 81 377-476 18-98 (99)
102 1iuz_A Plastocyanin; electron 98.3 1.1E-06 3.8E-11 70.5 6.7 76 5-92 18-98 (98)
103 1cuo_A Protein (azurin ISO-2); 98.3 1.2E-06 3.9E-11 73.9 6.9 88 5-93 18-129 (129)
104 1paz_A Pseudoazurin precursor; 98.3 2E-06 6.9E-11 71.9 8.1 75 5-94 21-95 (123)
105 1kdj_A Plastocyanin; electron 98.2 1.5E-06 5.2E-11 70.2 6.4 83 377-476 18-101 (102)
106 1pmy_A Pseudoazurin; electron 98.2 2.4E-06 8.3E-11 71.4 7.3 75 5-94 21-95 (123)
107 3ay2_A Lipid modified azurin p 98.2 3E-06 1E-10 74.3 8.2 88 5-93 58-167 (167)
108 1id2_A Amicyanin; beta barrel, 98.2 5.8E-06 2E-10 67.2 8.6 72 5-92 34-106 (106)
109 2ccw_A Azurin II, AZN-2; elect 98.1 1.5E-05 5.2E-10 67.0 9.9 88 5-93 18-129 (129)
110 1plc_A Plastocyanin; electron 98.1 1E-05 3.6E-10 64.8 7.8 81 377-476 18-98 (99)
111 2iaa_C Azurin; quinoprotein, t 98.0 3.9E-05 1.3E-09 64.3 9.7 88 5-93 17-128 (128)
112 2cal_A Rusticyanin; iron respi 98.0 1.8E-05 6.2E-10 68.9 7.8 82 377-476 62-153 (154)
113 1nwp_A Azurin; electron transp 98.0 3.8E-05 1.3E-09 64.4 9.5 87 5-92 18-128 (128)
114 2ux6_A Pseudoazurin; type-1 co 97.9 1.5E-05 5.1E-10 66.5 6.8 74 5-95 21-94 (122)
115 1fwx_A Nitrous oxide reductase 97.9 3.7E-05 1.3E-09 80.7 11.2 77 376-479 513-593 (595)
116 2ov0_A Amicyanin; beta-sandwic 97.9 2.7E-05 9.1E-10 63.2 7.8 71 377-476 34-104 (105)
117 3sbq_A Nitrous-oxide reductase 97.7 4.4E-05 1.5E-09 78.6 6.6 78 3-93 556-637 (638)
118 3fsa_A Azurin; copper, cupredo 97.3 0.001 3.6E-08 54.8 9.1 85 4-92 17-125 (125)
119 3tu6_A Pseudoazurin (blue copp 97.3 0.00033 1.1E-08 58.5 5.8 75 377-480 24-98 (127)
120 1iuz_A Plastocyanin; electron 97.3 0.0014 4.7E-08 52.1 9.0 79 377-476 19-97 (98)
121 3ef4_A Pseudoazurin, blue copp 97.2 0.00054 1.8E-08 56.9 6.4 74 377-479 23-96 (124)
122 3erx_A Pseudoazurin; copper pr 97.2 0.00089 3E-08 55.6 7.3 75 377-480 22-96 (123)
123 1id2_A Amicyanin; beta barrel, 97.1 0.0013 4.4E-08 53.1 7.8 71 377-476 35-105 (106)
124 3c75_A Amicyanin; copper prote 97.0 0.0021 7.3E-08 54.1 7.8 71 377-476 61-131 (132)
125 3sbq_A Nitrous-oxide reductase 96.6 0.0089 3.1E-07 61.8 10.7 75 376-477 558-636 (638)
126 1paz_A Pseudoazurin precursor; 96.4 0.013 4.4E-07 48.5 8.4 38 439-480 59-96 (123)
127 3ay2_A Lipid modified azurin p 96.3 0.013 4.4E-07 51.2 8.5 94 378-477 60-166 (167)
128 2cua_A Protein (CUA); CUA cent 96.3 0.0086 2.9E-07 50.5 7.3 74 6-93 61-135 (135)
129 1cuo_A Protein (azurin ISO-2); 96.3 0.024 8.2E-07 47.3 9.5 98 377-477 19-128 (129)
130 1pmy_A Pseudoazurin; electron 96.2 0.0085 2.9E-07 49.6 6.2 39 438-480 58-96 (123)
131 2cua_A Protein (CUA); CUA cent 96.0 0.042 1.4E-06 46.2 9.6 72 378-477 62-134 (135)
132 3s8f_B Cytochrome C oxidase su 95.7 0.024 8.2E-07 49.4 7.2 75 5-93 93-168 (168)
133 2ux6_A Pseudoazurin; type-1 co 95.7 0.022 7.5E-07 47.1 6.6 73 377-480 22-94 (122)
134 3s8f_B Cytochrome C oxidase su 95.4 0.1 3.5E-06 45.5 10.0 73 378-478 95-168 (168)
135 2ccw_A Azurin II, AZN-2; elect 95.3 0.1 3.5E-06 43.4 9.4 91 377-477 19-128 (129)
136 2iaa_C Azurin; quinoprotein, t 94.8 0.11 3.8E-06 43.1 8.2 91 377-477 18-127 (128)
137 1nwp_A Azurin; electron transp 94.7 0.14 4.9E-06 42.4 8.7 92 377-476 19-127 (128)
138 3fsa_A Azurin; copper, cupredo 93.4 0.38 1.3E-05 39.5 8.6 94 377-476 19-124 (125)
139 3hb3_B Cytochrome C oxidase su 75.9 8.6 0.00029 36.5 8.3 77 377-481 190-267 (298)
140 1cyx_A CYOA; electron transpor 75.6 9.2 0.00031 34.0 7.9 73 377-477 42-115 (205)
141 3isy_A Bsupi, intracellular pr 71.0 39 0.0013 27.2 9.9 72 164-236 16-102 (120)
142 1cyx_A CYOA; electron transpor 70.3 14 0.00047 32.9 7.7 60 158-236 41-100 (205)
143 2r39_A FIXG-related protein; s 68.8 13 0.00044 29.8 6.8 46 167-222 34-81 (118)
144 2gsm_B Cytochrome C oxidase su 65.3 21 0.00071 33.2 8.2 76 377-480 172-248 (262)
145 2gsm_B Cytochrome C oxidase su 52.8 36 0.0012 31.5 7.5 60 158-236 171-230 (262)
146 1v54_B Cytochrome C oxidase po 52.2 38 0.0013 30.6 7.4 77 376-480 140-217 (227)
147 3hb3_B Cytochrome C oxidase su 48.2 47 0.0016 31.4 7.6 59 158-235 189-247 (298)
148 3isy_A Bsupi, intracellular pr 45.1 64 0.0022 25.9 6.9 62 14-75 21-99 (120)
149 1xwv_A DER F II; beta sheets, 44.3 34 0.0012 27.8 5.3 58 8-65 28-93 (129)
150 2h7w_A Chagasin; beta-strands, 39.8 1.5E+02 0.005 24.1 8.5 65 4-71 32-104 (131)
151 1jer_A Cucumber stellacyanin; 39.8 38 0.0013 28.0 4.9 35 447-481 76-111 (138)
152 2xzz_A Protein-glutamine gamma 39.3 35 0.0012 26.6 4.4 53 13-71 22-79 (102)
153 1x9u_A Umecyanin; cupredoxin, 38.7 28 0.00096 27.8 3.8 34 447-480 73-107 (116)
154 2c34_A ICP, inhibitor of cyste 36.9 81 0.0028 25.0 6.3 67 4-71 14-89 (116)
155 2qjv_A Uncharacterized IOLB-li 36.1 1.7E+02 0.0058 27.1 9.2 74 158-236 32-112 (270)
156 2p9r_A Alpha-2-M, alpha-2-macr 35.2 28 0.00094 26.8 3.2 68 162-235 13-84 (102)
157 1v54_B Cytochrome C oxidase po 35.1 79 0.0027 28.5 6.7 59 158-235 140-198 (227)
158 1x9u_A Umecyanin; cupredoxin, 34.8 30 0.001 27.7 3.4 35 60-95 72-107 (116)
159 2yev_B Cytochrome C oxidase su 40.8 8.3 0.00028 37.4 0.0 77 377-481 142-219 (337)
160 2f1e_A Protein APAG; APAG prot 33.3 39 0.0013 27.5 3.9 47 16-62 34-86 (127)
161 1fft_B Ubiquinol oxidase; elec 32.3 38 0.0013 32.3 4.2 72 378-477 153-225 (315)
162 1ws8_A Mavicyanin; oxidized fo 31.5 44 0.0015 26.3 3.8 33 447-479 73-105 (109)
163 1xvs_A Protein APAG; MCSG APC2 30.4 39 0.0013 27.4 3.4 55 16-70 33-95 (126)
164 1nep_A EPV20, BNPC2, epididyma 30.0 73 0.0025 25.8 5.1 58 8-65 29-95 (130)
165 1xq4_A Protein APAG; all beta 29.5 49 0.0017 27.4 3.9 55 16-70 38-100 (139)
166 1fft_B Ubiquinol oxidase; elec 28.0 61 0.0021 30.8 4.8 59 158-235 151-209 (315)
167 2cio_B Inhibitor of cysteine p 26.8 2.1E+02 0.0071 22.8 7.2 65 4-71 12-93 (121)
168 1xvs_A Protein APAG; MCSG APC2 26.5 96 0.0033 25.1 5.1 50 167-219 31-84 (126)
169 2x3c_A Toxic extracellular end 26.3 2.5E+02 0.0085 26.9 8.9 70 166-236 38-128 (343)
170 2wtp_A ORF131 protein, CZCE; m 26.2 23 0.0008 28.9 1.3 23 158-180 71-93 (131)
171 3idu_A Uncharacterized protein 24.3 2.8E+02 0.0095 22.3 9.7 66 161-235 28-96 (127)
172 1tza_A APAG protein, SOR45; st 24.1 1E+02 0.0036 25.2 4.9 51 167-220 31-85 (134)
173 2f1e_A Protein APAG; APAG prot 24.0 1.1E+02 0.0038 24.7 5.0 50 167-219 32-85 (127)
174 2r5o_A Putative ATP binding co 23.9 2.6E+02 0.009 23.9 8.0 84 140-235 53-145 (188)
175 3e8v_A Possible transglutamina 23.5 2.3E+02 0.0077 21.0 6.2 45 189-233 4-48 (82)
176 3rfr_A PMOB; membrane, oxidore 23.2 37 0.0013 33.1 2.3 40 42-83 101-142 (419)
177 1xq4_A Protein APAG; all beta 22.8 1.2E+02 0.004 25.1 5.0 50 167-219 36-89 (139)
178 2wgn_B Inhibitor of cysteine p 22.5 3.1E+02 0.011 22.2 7.6 75 158-235 35-111 (132)
179 1ws8_A Mavicyanin; oxidized fo 22.4 75 0.0026 25.0 3.6 34 60-94 72-105 (109)
180 1tza_A APAG protein, SOR45; st 22.2 57 0.0019 26.8 2.9 55 16-70 33-95 (134)
181 2wgn_B Inhibitor of cysteine p 21.1 3.3E+02 0.011 22.0 7.6 65 4-71 34-105 (132)
182 1lm8_V VHL, VON hippel-lindau 20.4 1.4E+02 0.0049 25.1 5.1 43 10-60 14-56 (160)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.6e-96 Score=785.09 Aligned_cols=475 Identities=27% Similarity=0.508 Sum_probs=369.0
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCC-CCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeeecchh
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMD-EPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSIN 78 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~ 78 (504)
++|||+|||++||+|+|+|+|+|+ ++++|||||+++.+++|+||+|++ ||+|+||++|+|+|++ +++||||||||.+
T Consensus 30 ~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~-~~~GT~wYHsH~~ 108 (552)
T 1aoz_A 30 QFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTV-DNPGTFFYHGHLG 108 (552)
T ss_dssp BSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEEECST
T ss_pred ccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEEC-CCCEEEEEEECch
Confidence 589999999999999999999997 999999999999999999999999 9999999999999997 8999999999999
Q ss_pred hhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEEEccccCCCCCCC----
Q 042677 79 FQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNT---- 154 (504)
Q Consensus 79 ~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~---- 154 (504)
.|+++||+|+|||+++.....++ ..|+|++|+|+||+++....+...+.....+..+.++.+||||+..+.|...
T Consensus 109 ~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~c~~~~~~~ 187 (552)
T 1aoz_A 109 MQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYD 187 (552)
T ss_dssp TTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGC
T ss_pred hHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCccccCcccCcccc
Confidence 99999999999999976544454 3478999999999998876554333222122334578999999998755311
Q ss_pred -------------CCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEE
Q 042677 155 -------------TEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVT 221 (504)
Q Consensus 155 -------------~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~ 221 (504)
+..+.++|++|++|||||||++..+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|+
T Consensus 188 ~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~ 267 (552)
T 1aoz_A 188 SNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLIT 267 (552)
T ss_dssp TTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEE
T ss_pred cccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEE
Confidence 1234899999999999999999999999999999999999999999999999999999999999999
Q ss_pred e-cCCCceeEEEEeccCCcCCCCCCceeEEEEEeeCCCCC--CCCCCCCCCCCCCccccccccccccccccccCCCCccC
Q 042677 222 A-DKNPADYYIVASPKLSHADANSSIYGVAVLHYDNSTTP--PIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRN 298 (504)
Q Consensus 222 ~-~~~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~--~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~ 298 (504)
+ ++.+|+|||++....... ......++|+|.++... +..+.|..+..++...... ..++ .+.. .. +...
T Consensus 268 ~~~~~~g~y~i~~~~~~~~~---~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~--~~l~-~l~~-~~-~~~~ 339 (552)
T 1aoz_A 268 TDQNPSENYWVSVGTRARHP---NTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKN--FTYR-ITAA-MG-SPKP 339 (552)
T ss_dssp CCSCTTCCEEEEEEEESSCC---CSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHH--HHTT-CCBC-TT-CCCC
T ss_pred cCCCCCCCEEEEEEcccCCC---CCccEEEEEEECCCCCCCCCCCCCCCCCcccccccccc--cccc-cccc-CC-CCCC
Confidence 9 556899999998764211 24578899999876531 1112233332222211100 0011 1110 00 1111
Q ss_pred CccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCC---------CC-CC
Q 042677 299 ILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPV---------NA-SN 368 (504)
Q Consensus 299 p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~---------~~-~~ 368 (504)
|. .+++++. +.......++...|+|||.+|..+..|+|.+.+. +++++|+.+.... .+ ..
T Consensus 340 ~~------~~~~~~~---l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~-~~~g~~~~~~p~~~~~~~~~~~~~~~~ 409 (552)
T 1aoz_A 340 PV------KFNRRIF---LLNTQNVINGYVKWAINDVSLALPPTPYLGAMKY-NLLHAFDQNPPPEVFPEDYDIDTPPTN 409 (552)
T ss_dssp CS------SCSEEEE---EEEEEEEETTEEEEEETTEEECCCSSCHHHHHHT-TCTTSSCCSCCCSCCCTTCCTTSCCCC
T ss_pred CC------CCcEEEE---EEEeeccCCCeEEEEECCCccCCCCCCHHHHHhh-cCccccccCCCcccccccccccccccc
Confidence 22 2344444 3322212244568999999999999999887654 5667666442211 01 11
Q ss_pred CCcccceEEEeeeCCcEEEEEEEeCCC------CcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCc
Q 042677 369 VDAIRGVFVATGIHRGWIEIVLKNELE------VIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGA 442 (504)
Q Consensus 369 ~~~~~~~~~~~~~~g~~v~ivi~N~~~------~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g 442 (504)
...+.++.++.++.|++|+|+|+|.+. ..||||||||+||||++|.|.|++.....+|+.+|.|||||.|+++|
T Consensus 410 ~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g 489 (552)
T 1aoz_A 410 EKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYG 489 (552)
T ss_dssp TTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTE
T ss_pred ccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCc
Confidence 344667788999999999999999874 46999999999999999999998744556899999999999999999
Q ss_pred EEEEEEEecCceeeeeeeccchhhhhccEEEEEEecCCCCCCCCCCCCCCcccCcCCC
Q 042677 443 WTAVYAYLDNPGMWNLRSQLLKNWHLGQELYVRVYDADPNPNKERPPPENLLLCDGCQ 500 (504)
Q Consensus 443 ~~~irf~adnpG~w~~HCHil~H~~~Gm~~~~~V~~~~~~~~~~~~~p~~~~~c~~~~ 500 (504)
|++|||+|||||.|+|||||++|++.|||+.|.|... + ..++|++++.|+.+.
T Consensus 490 ~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-~----~~~~P~~~~~C~~~~ 542 (552)
T 1aoz_A 490 WTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-K----VGRIPTKALACGGTA 542 (552)
T ss_dssp EEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-G----CCCCCHHHHSSHHHH
T ss_pred eEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-h----hccCCcchhhhhccC
Confidence 9999999999999999999999999999999987543 2 445899999998765
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=2.5e-93 Score=754.21 Aligned_cols=450 Identities=23% Similarity=0.342 Sum_probs=351.6
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCC-CCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeeecchh
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMD-EPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSIN 78 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~ 78 (504)
++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ ||||+||++|+|+|++ .|+||||||||.+
T Consensus 94 ~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~-~q~GT~WYHsH~~ 172 (580)
T 3sqr_A 94 TVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV-TQYGTTWYHSHFS 172 (580)
T ss_dssp BSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CCCEEEEEEECST
T ss_pred ccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccccCCCCCCCeEEEEEEC-CCCcceEEeeccc
Confidence 689999999999999999999997 899999999999999999999999 9999999999999997 6899999999999
Q ss_pred hhhhCCccccEEEeCCCCcCCCCCCCCcce-eEEeeeeecccHHHHHHHHhccccCCCCCCCeEEEccccCCCCCC----
Q 042677 79 FQKAGGGFGPIRINNRIAINVPFPKPEAEF-DLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPN---- 153 (504)
Q Consensus 79 ~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~---- 153 (504)
.|+++||+|+|||+++.. .+| |.|. +|+|+||+++...++...... +..+.++++||||+..+.|..
T Consensus 173 ~q~~~GL~G~lIV~~p~~--~~y---D~d~~~l~l~Dw~~~~~~~~~~~~~~---~~~~~~d~~liNG~~~~~c~~~~~~ 244 (580)
T 3sqr_A 173 LQYGDGLFGPLIINGPAT--ADY---DEDVGVIFLQDWAHESVFEIWDTARL---GAPPALENTLMNGTNTFDCSASTDP 244 (580)
T ss_dssp TGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHHHHHHTT---SCCCCBSEEEETTBCCCCCTTCCCT
T ss_pred ccccCcCEEEEEeeCccc--CCC---CccceEEEEEEEecCCHHHHHHHHhc---cCCCCCceEEECCcccCCCcccccc
Confidence 999999999999998543 234 8887 899999999987766543332 235678999999999876642
Q ss_pred ----CCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCcee
Q 042677 154 ----TTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADY 229 (504)
Q Consensus 154 ----~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y 229 (504)
.+..+.++|++|++|||||||++....+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|++++++|+|
T Consensus 245 ~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y 324 (580)
T 3sqr_A 245 NCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNY 324 (580)
T ss_dssp TBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEE
T ss_pred ccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeE
Confidence 3356899999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred EEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCcccccccccccc-ccccccCCCCccCCccceeeeee
Q 042677 230 YIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIR-GCFVNSYHRNTRNILTYFSEINA 308 (504)
Q Consensus 230 ~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~-~~l~~~~~~p~~~p~~~~~~~~~ 308 (504)
||++.....+..........|||+|.++... .|..+...... .+.+.. ..|.+..+.+ .|. ....
T Consensus 325 ~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~~~~~~~~----~~~~~~~~~L~P~~~~~--~~~----~~~~ 390 (580)
T 3sqr_A 325 WIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTSVGTTPRG----TCEDEPVASLVPHLALD--VGG----YSLV 390 (580)
T ss_dssp EEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCCCCCCCCC----CSCCSCGGGCCBSSCCB--CCS----EEEE
T ss_pred EEEEecccccCccCCCCceEEEEEECCCCCC----CCCCCCCCccc----hhhcccccccccCCCCC--CCC----ccce
Confidence 9999876544322234578999999875421 12211111110 111110 1222211111 121 1223
Q ss_pred eeEEeeeeecccccccCCceEEEEcceeee-CCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEee----eCC
Q 042677 309 TFTYLRSKVMRSLAGIDGAPLYTVNNVSYL-TPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATG----IHR 383 (504)
Q Consensus 309 ~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~-~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g 383 (504)
++++. +. .++...|+|||.+|. ++..|+|++.+. |. .+ ......++.+ +.|
T Consensus 391 ~~~l~---~~-----~~~~~~w~iN~~s~~~~~~~P~L~~~~~----g~--~~----------~~~~~~~~~~~~~~~~~ 446 (580)
T 3sqr_A 391 DEQVS---SA-----FTNYFTWTINSSSLLLDWSSPTTLKIFN----NE--TI----------FPTEYNVVALEQTNANE 446 (580)
T ss_dssp EEEEE---EE-----ESSSEEEEETTBCCCCCTTSCHHHHHHT----TC--CC----------CCGGGCEEEECC----C
T ss_pred EEEEE---ec-----cCCceeEEECCEecccCCCCCchhhhhc----CC--cc----------CCCCcceeecccccCCC
Confidence 33333 32 245678999999997 468898876432 11 00 1123344555 469
Q ss_pred cEEEEEEEeCC--CCcceeeecCcceEEEeeccccCCccc-cCcCCCCCCCcccEEEeCCCcEEEEEEEecCceeeeeee
Q 042677 384 GWIEIVLKNEL--EVIDSWHLDGFGFYTVGYGIGDWNPQL-RSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWNLRS 460 (504)
Q Consensus 384 ~~v~ivi~N~~--~~~HP~HlHG~~F~Vv~~g~g~~~~~~-~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HC 460 (504)
++|||+|+|.+ .+.||||||||+||||++|.|.|+++. ...+|++||++|||+.|+++||++|||++||||+|+|||
T Consensus 447 ~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HC 526 (580)
T 3sqr_A 447 EWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHC 526 (580)
T ss_dssp CEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEE
T ss_pred cEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEE
Confidence 99999999988 789999999999999999999998654 357999999999999999999999999999999999999
Q ss_pred ccchhhhhccEEEEEEecCCCCCCCCCCCCCC-cccCcCC
Q 042677 461 QLLKNWHLGQELYVRVYDADPNPNKERPPPEN-LLLCDGC 499 (504)
Q Consensus 461 Hil~H~~~Gm~~~~~V~~~~~~~~~~~~~p~~-~~~c~~~ 499 (504)
||++|++.||+++|.+... + +++...+|++ ...|..+
T Consensus 527 Hi~~H~~~Gm~~~~~e~~~-~-i~~~~~~~~~~~~~C~~~ 564 (580)
T 3sqr_A 527 HIAWHASEGLAMQFVESQS-S-IAVKMTDTAIFEDTCANW 564 (580)
T ss_dssp CSHHHHHTTCEEEEEESGG-G-CCCCHHHHHHHHHHHHHH
T ss_pred CcHHHhhCCCcEEEEECHH-H-HhhccCCcHHHHHhhHHH
Confidence 9999999999999977433 2 3333335555 4678654
No 3
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=7.3e-91 Score=727.53 Aligned_cols=448 Identities=23% Similarity=0.345 Sum_probs=339.0
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCC-----CeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeee
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDE-----PLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYF 74 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~-----~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH 74 (504)
++|||+||+++||+|+|+|+|+|++ ++||||||+++++++++||++++ ||+|+||++|+|+|++++++||||||
T Consensus 31 ~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYH 110 (495)
T 3t6v_A 31 TFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYH 110 (495)
T ss_dssp SSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEE
T ss_pred cccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEeCCCCceeeee
Confidence 6899999999999999999999974 79999999999989999999999 99999999999999987899999999
Q ss_pred cchhhhhhCCccccEEEeCCCCcC-CCCCCCCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEEEccccCCCCCC
Q 042677 75 PSINFQKAGGGFGPIRINNRIAIN-VPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPN 153 (504)
Q Consensus 75 ~H~~~~~~~Gl~G~liV~~~~~~~-~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~ 153 (504)
||.+.|+.+||+|+|||+++.... .+|+..+.|++|+++||+++....+ . .+....++++||||++++.|..
T Consensus 111 sH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~------~-~~~p~~~d~~liNG~g~~~~~~ 183 (495)
T 3t6v_A 111 SHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM------G-AGGAITADSTLIDGLGRTHVNV 183 (495)
T ss_dssp ECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS------C-SSSCCCCSEEEETTBCCBSSSC
T ss_pred ccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh------c-cCCCCCCcEEEECCcCcCCCCc
Confidence 999999999999999999755321 2343335678999999999765321 1 1122378999999998765433
Q ss_pred -CCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEE
Q 042677 154 -TTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIV 232 (504)
Q Consensus 154 -~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~ 232 (504)
....+.++|++|++|||||||++..+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|++++++|+|||+
T Consensus 184 ~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~ 263 (495)
T 3t6v_A 184 AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIR 263 (495)
T ss_dssp CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEE
T ss_pred ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEEEE
Confidence 3456899999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred EeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCC--CCcc-CCccceeeeeee
Q 042677 233 ASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYH--RNTR-NILTYFSEINAT 309 (504)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~--~p~~-~p~~~~~~~~~~ 309 (504)
+.....+... ......|||+|.++....+ ....+.. .. ..+.+ ..|.+... .|.. .+. .++
T Consensus 264 a~~~~~~~~~-~~~~~~ail~Y~~~~~~~p--~~~~~~~-~~----~~~~~--~~L~p~~~~~~p~~~~~~------~~d 327 (495)
T 3t6v_A 264 ANPNSGGEGF-DGGINSAILRYDGATTADP--VTVASTV-HT----KCLIE--TDLHPLSRNGVPGNPHQG------GAD 327 (495)
T ss_dssp EEESSSSCSC-GGGTTEEEEEETTSCSSCC--CCCCCSS-CS----SBCCG--GGCCBSSCCCCSSCSSTT------CSS
T ss_pred EecccCcccc-CCCceEEEEEECCCCCCCC--CCCCCCC-Cc----ccccc--ccccccccccCCCccCCC------CCc
Confidence 9865333211 1234579999987643211 1100000 00 00111 11111111 1100 011 123
Q ss_pred eEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCCcEEEEE
Q 042677 310 FTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIV 389 (504)
Q Consensus 310 ~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~iv 389 (504)
+++. +...+ ++ ..|+|||.+|..++.|+|++.+. +.++.. .......++.++.|++|||+
T Consensus 328 ~~~~---l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~----g~~~~~---------~~~~~~~v~~~~~g~~V~iv 387 (495)
T 3t6v_A 328 CNLN---LSLGF---AC-GNFVINGVSFTPPTVPVLLQICS----GANTAA---------DLLPSGSVISLPSNSTIEIA 387 (495)
T ss_dssp EEEE---CCEEE---ET-TEEEETTBCCCCCSSCHHHHHHT----TCCSST---------TSSSTTSEEEECTTCEEEEE
T ss_pred EEEE---EEEEe---cC-cEEEEcCEecCCCCCcchhhhhc----CCcCcc---------cccCCcceEEecCCCEEEEE
Confidence 3333 22211 12 37999999999999998887543 222211 11234458899999999999
Q ss_pred EE-eCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCC-CcEEEEEEEecCceeeeeeeccchhhh
Q 042677 390 LK-NELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYP-GAWTAVYAYLDNPGMWNLRSQLLKNWH 467 (504)
Q Consensus 390 i~-N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~-~g~~~irf~adnpG~w~~HCHil~H~~ 467 (504)
|+ |...+.||||||||+|+||+.+.. ..+|+.+|.||||+.|++ |+|++|||+|||||.|+|||||++|++
T Consensus 388 l~~n~~~~~HP~HLHGh~F~vl~~~g~-------~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~ 460 (495)
T 3t6v_A 388 LPAGAAGGPHPFHLHGHDFAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLD 460 (495)
T ss_dssp EECCSSSCCCEEEETTCCEEEEECTTC-------CCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHH
T ss_pred EccCCCCCCcceeecCCcEEEEecCCC-------CCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhh
Confidence 98 677889999999999999987421 247889999999999997 899999999999999999999999999
Q ss_pred hccEEEEEEecCCCCCCCCCCCCCC-cccCcCCC
Q 042677 468 LGQELYVRVYDADPNPNKERPPPEN-LLLCDGCQ 500 (504)
Q Consensus 468 ~Gm~~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~ 500 (504)
.||+++|.+ .+++ +++...+|++ ...|..|.
T Consensus 461 ~Gm~~~~~e-~~~~-~~~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 461 AGFAIVFAE-DIPN-TASANPVPEAWSNLCPSYD 492 (495)
T ss_dssp TTCEEEEEE-THHH-HHHHCCCCHHHHHHHHHHH
T ss_pred cCCeEEEEE-ChhH-hccccCCCHHHHHHhhHhh
Confidence 999998844 3432 3333445666 57886653
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-90 Score=734.69 Aligned_cols=452 Identities=22% Similarity=0.316 Sum_probs=344.8
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCC-CCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeeecchh
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMD-EPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSIN 78 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~-~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~ 78 (504)
++|||+||+++||+|+|+|+|+|+ ++++|||||+++.+++++||+|++ ||+|+||++|+|+|++++++||||||||.+
T Consensus 30 ~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~ 109 (534)
T 1zpu_A 30 QFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTD 109 (534)
T ss_dssp BSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSS
T ss_pred ccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCc
Confidence 589999999999999999999998 999999999999888999999999 999999999999999866999999999999
Q ss_pred hhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHHHHhc-c-ccCCCCCCCeEEEccccCCCCCCCCC
Q 042677 79 FQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRSKMKK-M-QWAYFNPPDWMLMNGKVSLMNPNTTE 156 (504)
Q Consensus 79 ~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~-~-~~~~~~~~~~~liNG~~~~~~~~~~~ 156 (504)
.|+++||+|+|||+++.. |+ .+|+|++|+|+||+++...++...+.. . ..+..+.++.+||||+..
T Consensus 110 ~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~~-------- 177 (534)
T 1zpu_A 110 GQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMN-------- 177 (534)
T ss_dssp SGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBSS--------
T ss_pred ccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCCc--------
Confidence 999999999999998653 33 348899999999999988776442221 1 134566789999999987
Q ss_pred cceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCC-CceeEEEEec
Q 042677 157 HESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKN-PADYYIVASP 235 (504)
Q Consensus 157 ~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~-~g~y~i~~~~ 235 (504)
+.++|++||+|||||||++..+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|++++. .++|||++..
T Consensus 178 -~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~ 256 (534)
T 1zpu_A 178 -LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKF 256 (534)
T ss_dssp -CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEE
T ss_pred -eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEec
Confidence 89999999999999999999999999999999999999999999999999999999999999999864 4789999875
Q ss_pred cCCcC---CCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCCccceeeeeeeeEE
Q 042677 236 KLSHA---DANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYFSEINATFTY 312 (504)
Q Consensus 236 ~~~~~---~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~~~~~~~~~~ 312 (504)
...+. .........++|+|.++...+ .+ +....+... +.+. .+.+....+ .+. .+++++
T Consensus 257 ~~~~~~~~~~~~~~~~~ail~y~~~~~~p---~~--~~~~~~~~~---~~~~--~l~p~~~~~--~~~------~~~~~~ 318 (534)
T 1zpu_A 257 DDTMLDVIPSDLQLNATSYMVYNKTAALP---TQ--NYVDSIDNF---LDDF--YLQPYEKEA--IYG------EPDHVI 318 (534)
T ss_dssp CGGGSSSCCTTCCCEEEEEEESCTTSCBC---CC--CCCSCSSCS---CCGG--GCCBSSCCC--CCC------SCSEEE
T ss_pred cccccccCCCCCCcceEEEEEeCCCCCCC---CC--Ccccccccc---cccc--cceeCCCCC--CCC------CCCeEE
Confidence 43211 112245678999998764211 11 000011000 1111 111110011 111 123444
Q ss_pred eeeeeccccc-ccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCCcEEEEEEE
Q 042677 313 LRSKVMRSLA-GIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLK 391 (504)
Q Consensus 313 ~~~~l~~~~~-~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~ 391 (504)
. |...+. ..++...|+|||.+|..++.|+|++.+. .+.+. .++ .....++.++.++.|++|+|+|+
T Consensus 319 ~---l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~---~~~~~-----~~~--~~~~~~~~~~~~~~g~~v~ivi~ 385 (534)
T 1zpu_A 319 T---VDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLS---SGDQA-----NNS--EIYGSNTHTFILEKDEIVEIVLN 385 (534)
T ss_dssp E---EEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTT---SGGGT-----TCG--GGGCSSSCEEEECTTCEEEEEEE
T ss_pred E---EEEEeeccCCceeEEEECCCcccCCCCCceeeecc---cCccc-----CCC--cccCCCceEEEeCCCCEEEEEEe
Confidence 4 322211 1245568999999999999998876543 11111 011 01123466788999999999999
Q ss_pred eCCCCcceeeecCcceEEEeeccc----------cCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceeeeeeec
Q 042677 392 NELEVIDSWHLDGFGFYTVGYGIG----------DWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWNLRSQ 461 (504)
Q Consensus 392 N~~~~~HP~HlHG~~F~Vv~~g~g----------~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCH 461 (504)
|.+.+.||||||||+||||+++.+ .|++..... ...+|.|||||.|+++||++|||+|||||.|+||||
T Consensus 386 N~~~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCH 464 (534)
T 1zpu_A 386 NQDTGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCH 464 (534)
T ss_dssp ECSSSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEEC
T ss_pred CCCCCCCCeEecCCceEEEeecCCccccccCcccccCcccccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeC
Confidence 999999999999999999999864 444432222 246899999999999999999999999999999999
Q ss_pred cchhhhhccEEEEEEecCCCCCCCC--CCCCCC-cccCcCC
Q 042677 462 LLKNWHLGQELYVRVYDADPNPNKE--RPPPEN-LLLCDGC 499 (504)
Q Consensus 462 il~H~~~Gm~~~~~V~~~~~~~~~~--~~~p~~-~~~c~~~ 499 (504)
|++|++.|||..|.|...+ +++. ..+|++ .+.|..+
T Consensus 465 i~~H~~~GM~~~~~~~~~~--~~~~~~~~~p~~~~~~C~~~ 503 (534)
T 1zpu_A 465 IEWHLLQGLGLVLVEDPFG--IQDAHSQQLSENHLEVCQSC 503 (534)
T ss_dssp CHHHHHTTCEEEEEECHHH--HHHCGGGSCCHHHHHHHHHT
T ss_pred chhHhhcCCeEEEEECccc--cccccccCCChhHhhhhhcc
Confidence 9999999999999875332 3222 455655 5788654
No 5
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=9.2e-91 Score=726.70 Aligned_cols=446 Identities=23% Similarity=0.370 Sum_probs=340.1
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCC-----CCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeee
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMD-----EPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYF 74 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~-----~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH 74 (504)
++|||+|||++||+|+|+|+|+|+ +++||||||+++.+++++||++++ ||+|+||++|+|+|++++++||||||
T Consensus 30 ~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYH 109 (499)
T 3pxl_A 30 VTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYH 109 (499)
T ss_dssp BSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEE
T ss_pred cccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeee
Confidence 689999999999999999999997 479999999999989999999999 99999999999999987899999999
Q ss_pred cchhhhhhCCccccEEEeCCCCcC-CCCCCCCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEEEccccCCCCCC
Q 042677 75 PSINFQKAGGGFGPIRINNRIAIN-VPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPN 153 (504)
Q Consensus 75 ~H~~~~~~~Gl~G~liV~~~~~~~-~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~ 153 (504)
||.+.|+.+||+|+|||+++.... .+|+..+.|++|+++||+++.... . .+....++++||||++.+.|..
T Consensus 110 sH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~------~--~~~p~~~d~~liNG~~~~~~~~ 181 (499)
T 3pxl_A 110 SHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL------G--PRFPGGADATLINGKGRAPSDS 181 (499)
T ss_dssp ECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT------S--CSSCSSCSEEEETTBCCCTTCT
T ss_pred ccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc------c--cCCCCCCcEEEECCCCcCCCCC
Confidence 999999999999999999754321 224333567899999999875422 1 1122367999999998877665
Q ss_pred CCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEE
Q 042677 154 TTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233 (504)
Q Consensus 154 ~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~ 233 (504)
....+.++|++|++|||||||++..+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|++++++|+|||++
T Consensus 182 ~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a 261 (499)
T 3pxl_A 182 VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRA 261 (499)
T ss_dssp TCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEE
T ss_pred CCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEE
Confidence 56678999999999999999999999999999999999999999999999999999999999999999998889999999
Q ss_pred eccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCC--CCcc-CCccceeeeeeee
Q 042677 234 SPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYH--RNTR-NILTYFSEINATF 310 (504)
Q Consensus 234 ~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~--~p~~-~p~~~~~~~~~~~ 310 (504)
.....+... ......|||+|.++....+. .+..+.... +.+ ..|.+... .|.. .+. .+++
T Consensus 262 ~~~~~~~~~-~~~~~~ail~Y~~~~~~~p~-~~~~~~~~~-------~~~--~~L~p~~~~~~p~~~~~~------~~d~ 324 (499)
T 3pxl_A 262 NPNFGNVGF-DGGINSAILRYDGAPAVEPT-TNQTTSVKP-------LNE--VDLHPLVSTPVPGAPSSG------GVDK 324 (499)
T ss_dssp EESSSSCSC-GGGTTEEEEEETTSCSSCCC-CCCCCCSSB-------CCG--GGCCBSSCCCCSSCSSTT------CSSE
T ss_pred ecccCcccc-CCCceEEEEEeCCCCCCCCC-CCCCCCCcc-------ccc--ccccccccccCCCcccCC------CCcE
Confidence 865333211 12345799999876432111 011010000 111 11111111 1100 011 1234
Q ss_pred EEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCCcEEEEEE
Q 042677 311 TYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVL 390 (504)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi 390 (504)
++. +...+ ++ ..|+|||.+|..|+.|+|++.+. +.++.. .......++.++.|++|+|+|
T Consensus 325 ~~~---l~~~~---~~-~~w~iNg~s~~~~~~P~L~~~~~----g~~~~~---------~~~~~~~v~~~~~g~~V~ivl 384 (499)
T 3pxl_A 325 AIN---MAFNF---NG-SNFFINGASFVPPTVPVLLQILS----GAQTAQ---------DLLPSGSVYVLPSNASIEISF 384 (499)
T ss_dssp EEE---CCEEE---CS-SCEEETTBCCCCCSSCHHHHHHT----TCCSTT---------TSSSTTSEEEECTTCEEEEEE
T ss_pred EEE---EEEEe---cC-cEEEEcCEecCCCCCchhhhhhc----CCcccc---------ccCCCceeEEecCCCEEEEEE
Confidence 443 32211 12 37999999999999998887543 222211 112334578999999999999
Q ss_pred E---eCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCC---CcEEEEEEEecCceeeeeeeccch
Q 042677 391 K---NELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYP---GAWTAVYAYLDNPGMWNLRSQLLK 464 (504)
Q Consensus 391 ~---N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~---~g~~~irf~adnpG~w~~HCHil~ 464 (504)
+ |...+.||||||||+|+||+.+. ...+|+.+|.||||+.|++ ++|++|||+|||||.|+|||||++
T Consensus 385 ~~~~n~~~~~HP~HLHGh~F~Vl~~~g-------~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~ 457 (499)
T 3pxl_A 385 PATAAAPGAPHPFHLHGHTFAVVRSAG-------STVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDF 457 (499)
T ss_dssp ECCTTSCSCSCEEEETTCCEEEEECTT-------CCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHH
T ss_pred ecCcccCCCCccceecCCcEEEEeccC-------CcccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChh
Confidence 9 56688999999999999998642 1247889999999999997 999999999999999999999999
Q ss_pred hhhhccEEEEEEecCCCCCCCCCCCCCC-cccCcCCC
Q 042677 465 NWHLGQELYVRVYDADPNPNKERPPPEN-LLLCDGCQ 500 (504)
Q Consensus 465 H~~~Gm~~~~~V~~~~~~~~~~~~~p~~-~~~c~~~~ 500 (504)
|++.||+++|. +.+++ +++...+|++ ...|..|.
T Consensus 458 H~~~Gm~~~~~-e~~~~-~~~~~~~p~~~~~~C~~~~ 492 (499)
T 3pxl_A 458 HLEGGFAVVMA-EDTPD-VKAVNPVPQAWSDLCPTYD 492 (499)
T ss_dssp HHHTTCEEEEE-ESGGG-HHHHSCCCHHHHTHHHHHH
T ss_pred HhhCCCcEEEE-EChhH-hccccCCCHHHHHhhhHhh
Confidence 99999998884 44443 3333445655 57896553
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=4.3e-90 Score=729.48 Aligned_cols=453 Identities=22% Similarity=0.314 Sum_probs=342.7
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCC-----CCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeee
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMD-----EPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYF 74 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~-----~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH 74 (504)
++|||+|||++||+|+|+|+|+|+ +++||||||+++.+++++||+|++ ||+|+||++|+|+|++++++||||||
T Consensus 51 ~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH 130 (521)
T 1v10_A 51 TTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYH 130 (521)
T ss_dssp SSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEE
T ss_pred ccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEE
Confidence 689999999999999999999998 999999999999888999999999 99999999999999987899999999
Q ss_pred cchhhhhhCCccccEEEeCCCCc-CCCCCCCCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEEEccccCCCCC-
Q 042677 75 PSINFQKAGGGFGPIRINNRIAI-NVPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNP- 152 (504)
Q Consensus 75 ~H~~~~~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~- 152 (504)
||.+.|+++||+|+|||+++.+. +.+|+..++|++|+|+||+++...++.. .. .+..+.++++||||+.++.|.
T Consensus 131 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~--~~--~~~~~~~d~~liNG~~~~~~~~ 206 (521)
T 1v10_A 131 SHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFP--NP--NKAPPAPDTTLINGLGRNSANP 206 (521)
T ss_dssp ECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-----------CCCSCCSEEEETTBCCCSSCG
T ss_pred eccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHHHhh--cc--CCCCCCCCEEEECCcccCCCCC
Confidence 99999999999999999986422 1234333469999999999987655432 11 123566899999999987654
Q ss_pred CCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEE
Q 042677 153 NTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIV 232 (504)
Q Consensus 153 ~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~ 232 (504)
.....+.++|++|++|||||||++..+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|++++.+|+|||+
T Consensus 207 ~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~ 286 (521)
T 1v10_A 207 SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIR 286 (521)
T ss_dssp GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEE
T ss_pred CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeee
Confidence 33445899999999999999999999999999999999999999999999999999999999999999999778999999
Q ss_pred EeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCCccceeeeeeeeEE
Q 042677 233 ASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYFSEINATFTY 312 (504)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~~~~~~~~~~ 312 (504)
+.....+... ......++|+|.++....+...+. ...++ .. ..+.+....+ .|.... ....++++
T Consensus 287 ~~~~~~~~~~-~~~~~~ail~y~~~~~~~p~~~~~--~~~~~-------~~--~~l~p~~~~~--~p~~~~-~~~~~~~~ 351 (521)
T 1v10_A 287 ANPSNGRNGF-TGGINSAIFRYQGAAVAEPTTSQN--SGTAL-------NE--ANLIPLINPG--APGNPV-PGGADINL 351 (521)
T ss_dssp EEESSSSCSC-GGGTTEEEEEETTCCSCCCCCCCC--CSCBC-------CG--GGCCBSSCCC--CSSCSS-TTCSSEEE
T ss_pred eccccccccC-CCCceeEEEEECCCCCCCCCCCCC--ccccc-------ch--hhcccCCccc--CCCccc-CCcceEEE
Confidence 9865332211 112346999998765321111000 00111 00 0111111000 111000 00123333
Q ss_pred eeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCCcEEEEEEEe
Q 042677 313 LRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKN 392 (504)
Q Consensus 313 ~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N 392 (504)
. +.... ......|+|||++|..+..|+|++.+. +.++.. ....++.++.++.|++|||+++|
T Consensus 352 ~---l~~~~--~~~~~~~~iNg~~~~~~~~P~l~~~~~----g~~~~~---------~~~~~~~~~~v~~g~~vei~l~N 413 (521)
T 1v10_A 352 N---LRIGR--NATTADFTINGAPFIPPTVPVLLQILS----GVTNPN---------DLLPGGAVISLPANQVIEISIPG 413 (521)
T ss_dssp E---CCEEC--CSSSSCCEESSCCCCCCSSCHHHHHHH----TCCCGG---------GSSSTTTEEEECTTCEEEEEEEC
T ss_pred E---EEEec--CCceeEEEECCCcccCCCCchhhhhhc----CCcccc---------cCCCCceEEEecCCCEEEEEEcC
Confidence 3 32211 112247999999999888888876543 111111 12245678899999999999999
Q ss_pred CCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEe-CCCcEEEEEEEecCceeeeeeeccchhhhhccE
Q 042677 393 ELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQV-YPGAWTAVYAYLDNPGMWNLRSQLLKNWHLGQE 471 (504)
Q Consensus 393 ~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~v-p~~g~~~irf~adnpG~w~~HCHil~H~~~Gm~ 471 (504)
.+.||||||||+||||+++.+. .+|+.+|.|||||.| +++||++|||+|||||.|+|||||++|++.|||
T Consensus 414 --~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~ 484 (521)
T 1v10_A 414 --GGNHPFHLHGHNFDVVRTPGSS-------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLA 484 (521)
T ss_dssp --CBSCEEEESSCCEEEEECTTCS-------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCE
T ss_pred --CCCCCEEEccceEEEEecCCCC-------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCe
Confidence 7899999999999999997652 367889999999999 899999999999999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCCCCC-CcccCcCCCC
Q 042677 472 LYVRVYDADPNPNKERPPPE-NLLLCDGCQS 501 (504)
Q Consensus 472 ~~~~V~~~~~~~~~~~~~p~-~~~~c~~~~~ 501 (504)
..|.|...+ +++..++|+ +.+.|..+.+
T Consensus 485 ~~~~v~~~~--~~~~~~~p~~~~~~C~~~~~ 513 (521)
T 1v10_A 485 VVFAEDIPN--IPIANAISPAWDDLCPKYNA 513 (521)
T ss_dssp EEEEESGGG--HHHHSCCCHHHHTHHHHHTT
T ss_pred EEEEECCcc--hhhccCCChHHhhhchhhhc
Confidence 999886443 223444564 4789977654
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=2.6e-89 Score=721.18 Aligned_cols=449 Identities=24% Similarity=0.410 Sum_probs=342.0
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCC-----CCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeee
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMD-----EPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYF 74 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~-----~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH 74 (504)
++ ||+|||++||+|+|+|+|+|+ +++||||||+++.+++++||+|++ ||+|.||++|+|+|++++++||||||
T Consensus 31 ~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~GT~wYH 109 (503)
T 1hfu_A 31 VH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYH 109 (503)
T ss_dssp BS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCEEEEEE
T ss_pred cc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeEEEEEEeCCCCccEEEE
Confidence 57 999999999999999999998 999999999999888999999999 99999999999999977899999999
Q ss_pred cchhhhhhCCccccEEEeCCCCc-CCCCCCCCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEEEccccCCCCCC
Q 042677 75 PSINFQKAGGGFGPIRINNRIAI-NVPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPN 153 (504)
Q Consensus 75 ~H~~~~~~~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~ 153 (504)
||.+.|+++||+|+|||+++.+. +.+|+..++|++|+|+||+++...++. ..+.++++||||+.++.|..
T Consensus 110 ~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~---------~~~~~d~~liNG~~~~~~~~ 180 (503)
T 1hfu_A 110 SHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ---------GAAQPDATLINGKGRYVGGP 180 (503)
T ss_dssp ECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC------------CCSEEEETTBCCBTTCC
T ss_pred ecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---------CCCCCCEEEECcccccCCCC
Confidence 99999999999999999986432 223433346999999999998764421 12457899999999887766
Q ss_pred CCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEE
Q 042677 154 TTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233 (504)
Q Consensus 154 ~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~ 233 (504)
.+..+.++|++|++|||||||++..+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|++++++|+|||++
T Consensus 181 ~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a 260 (503)
T 1hfu_A 181 AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRA 260 (503)
T ss_dssp CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEE
T ss_pred CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEEcccceEEEEEEcCCCccceeeee
Confidence 66678999999999999999999999999999999999999999999999999999999999999999997789999999
Q ss_pred eccCCcCC---CCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCCccceeeeeeee
Q 042677 234 SPKLSHAD---ANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYFSEINATF 310 (504)
Q Consensus 234 ~~~~~~~~---~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~~~~~~~~ 310 (504)
........ ........++|+|.++....+. .+..+...+++ . ..+.+....+ .|.... ....++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~-~~~~~~~~~l~-------~--~~l~p~~~~~--~p~~~~-~~~~~~ 327 (503)
T 1hfu_A 261 QPNKGRNGLAGTFANGVNSAILRYAGAANADPT-TSANPNPAQLN-------E--ADLHALIDPA--APGIPT-PGAADV 327 (503)
T ss_dssp EESSCGGGGGGCCGGGTTEEEEEETTSCSSCCC-CCCCSSCCBCC-------G--GGCBBSSSCS--CSSCSS-TTCSSE
T ss_pred ccccCCcccccccCCCceEEEEEECCCCCCCCC-CCCCCccCCCc-------c--ccccccCccC--CCCccc-CCcceE
Confidence 86532211 0112234699999876532111 11111111111 0 0111111000 111000 001223
Q ss_pred EEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCCcEEEEEE
Q 042677 311 TYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVL 390 (504)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi 390 (504)
++. +.... ++. .|+|||++|..+..|+|++.+. +.++.. ....++.++.++.|++|||++
T Consensus 328 ~~~---l~~~~---~~~-~~~iNg~~~~~~~~P~l~~~~~----g~~~~~---------~~~~~~~~~~v~~g~~vei~l 387 (503)
T 1hfu_A 328 NLR---FQLGF---SGG-RFTINGTAYESPSVPTLLQIMS----GAQSAN---------DLLPAGSVYELPRNQVVELVV 387 (503)
T ss_dssp EEE---CCEEE---ETT-EEEETTBCCCCCSSCHHHHHHT----TCCSGG---------GSSSTTSEEEECSSCEEEEEE
T ss_pred EEE---EEeec---cCc-eEEECCCccCCCCCcchhhhhc----CCcccc---------cCCCCceEEEccCCCEEEEEE
Confidence 333 22111 222 7999999999888898876542 222111 123456788999999999999
Q ss_pred Ee-CCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEe-CCCcEEEEEEEecCceeeeeeeccchhhhh
Q 042677 391 KN-ELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQV-YPGAWTAVYAYLDNPGMWNLRSQLLKNWHL 468 (504)
Q Consensus 391 ~N-~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~v-p~~g~~~irf~adnpG~w~~HCHil~H~~~ 468 (504)
+| .+.+.||||||||+||||+++.+. .+++.+|.|||||.| +++||++|||+|||||.|+|||||++|++.
T Consensus 388 ~~n~~~~~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~ 460 (503)
T 1hfu_A 388 PAGVLGGPHPFHLHGHAFSVVRSAGSS-------TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMN 460 (503)
T ss_dssp ECCSTTCCCEEEETTCCEEEEECTTCC-------CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHT
T ss_pred ECCCCCCCCCEEEecceEEEEecCCCC-------ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhC
Confidence 94 568899999999999999997652 367889999999999 899999999999999999999999999999
Q ss_pred ccEEEEEEecCCCCCCCCCCCCC-CcccCcCCCC
Q 042677 469 GQELYVRVYDADPNPNKERPPPE-NLLLCDGCQS 501 (504)
Q Consensus 469 Gm~~~~~V~~~~~~~~~~~~~p~-~~~~c~~~~~ 501 (504)
|||..|.|...+ +++..++|+ +.+.|..+..
T Consensus 461 GM~~~~~v~~~~--~~~~~~~p~~~~~~C~~~~~ 492 (503)
T 1hfu_A 461 GLAIVFAEDMAN--TVDANNPPVEWAQLCEIYDD 492 (503)
T ss_dssp TCEEEEEECHHH--HHHHCCCCHHHHHHHHHHHT
T ss_pred CCeEEEEECchh--hhhccCCChHHhhhccchhh
Confidence 999999886443 223344564 4789976643
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=2.5e-88 Score=721.12 Aligned_cols=457 Identities=23% Similarity=0.316 Sum_probs=345.3
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCC-CCCeeeeeCCcCCCCCCCCCCCccc-CCcCCC-CCeEEEEEEeCCCceeeeeecch
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSGT-NCPIQP-GTNWTYVFQTKDQIGSFFYFPSI 77 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~~~~~~~~~DG~~~~-~~~i~p-g~~~~y~~~~~~~~Gt~wYH~H~ 77 (504)
++|||+|||++||+|+|+|+|+| .++++|||||+++.+++++||+|++ ||+|.| |++|+|+|++ .++||||||||.
T Consensus 63 ~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~ 141 (559)
T 2q9o_A 63 NIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHF 141 (559)
T ss_dssp BSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECS
T ss_pred cccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEEC-CCCEEEEEEEcc
Confidence 58999999999999999999999 6899999999999888999999999 999999 9999999997 689999999999
Q ss_pred hhhhhCCccccEEEeCCCCcCCCCCCCCcce-eEEeeeeecccHHHHHHHHhccccCCCCCCCeEEEccccCCCCCCCCC
Q 042677 78 NFQKAGGGFGPIRINNRIAINVPFPKPEAEF-DLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTE 156 (504)
Q Consensus 78 ~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~ 156 (504)
+.|+++||+|+|||+++.. .+| |.|. +|+|+||+++...++..... .+..+.++.+||||+..+.|...+.
T Consensus 142 ~~q~~~Gl~G~liV~~~~~--~~~---d~d~~~l~l~Dw~~~~~~~~~~~~~---~~~~~~~d~~liNG~~~~~~~~~g~ 213 (559)
T 2q9o_A 142 SAQYGNGVVGTIQINGPAS--LPY---DIDLGVFPITDYYYRAADDLVHFTQ---NNAPPFSDNVLINGTAVNPNTGEGQ 213 (559)
T ss_dssp TTGGGGTCEEEEEEECCCS--SCC---SEEEEEEEEEEECSSCHHHHHHHHT---TSCCCCBSEEEETTBCBCTTTCCBC
T ss_pred cchhcCCceEEEEecCCCc--CCC---cccceEEEEeccccCCHHHHhhhhh---cCCCCccceeEECCccccCcCCCCC
Confidence 9999999999999998553 234 7787 99999999998776643222 2345568999999999876655555
Q ss_pred cceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEEec-
Q 042677 157 HESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASP- 235 (504)
Q Consensus 157 ~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~- 235 (504)
.+.++|++|++|||||||++..+.+.|+|+||+|+|||+||.+++|..+++|.|++||||||+|++++.+|+|||++..
T Consensus 214 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~ 293 (559)
T 2q9o_A 214 YANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFG 293 (559)
T ss_dssp CCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECC
T ss_pred ceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEec
Confidence 6899999999999999999999999999999999999999999999999999999999999999999878999999986
Q ss_pred -cCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCCccceeeeeeeeEEee
Q 042677 236 -KLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYFSEINATFTYLR 314 (504)
Q Consensus 236 -~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~~~~~~~~~~~~ 314 (504)
...+.. .......++|+|.++... +|..+.....+. .+.+. ..+.+..+.+ .|.... ....++++.
T Consensus 294 ~~~~~~~-~~~~~~~ail~y~~~~~~----~P~~~~~~~~~~---~~~~~-~~l~p~~~~~--~p~~~~-~~~~~~~~~- 360 (559)
T 2q9o_A 294 GQAACGG-SLNPHPAAIFHYAGAPGG----LPTDEGTPPVDH---QCLDT-LDVRPVVPRS--VPVNSF-VKRPDNTLP- 360 (559)
T ss_dssp GGGTTCC-BSSSCCEEEEEETTSCCS----CCCCCCCCCCCC---TTCCC-SCCCBSSCCB--CCCTTC-CCCGGGEEE-
T ss_pred cccccCC-CCCCceeEEEEECCCCCC----CCCCCCCcCCCc---ccccc-cccccCCCCC--CCCccc-ccceeEEEE-
Confidence 322211 113456899999876431 121111100000 00000 1111111111 111100 000112222
Q ss_pred eeecccccccCCceEEEEcceeeeC-CCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeC-CcEEEEEEEe
Q 042677 315 SKVMRSLAGIDGAPLYTVNNVSYLT-PETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIH-RGWIEIVLKN 392 (504)
Q Consensus 315 ~~l~~~~~~~~~~~~~~iNg~~~~~-~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~ivi~N 392 (504)
+.... ...+...|+|||++|.. +..|+|.+... +.. ....+..++.++. ++|++|+++|
T Consensus 361 --~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~-g~~---------------~~~~~~~~~~~~~~~~v~~~vi~n 421 (559)
T 2q9o_A 361 --VALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILT-GNT---------------SYPVSDNIVQVDAVDQWTYWLIEN 421 (559)
T ss_dssp --EEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHH-TCC---------------CCCGGGCEEEECCSSCEEEEEEEE
T ss_pred --EEeec-CCCceEEEEECCEecccCCCCCcHhHhhc-CCc---------------cCCCCceEEEcCCCCEEEEEEEeC
Confidence 22110 12345789999999975 46787765432 110 1123455666764 6788899999
Q ss_pred CC----CCcceeeecCcceEEEeecc---------ccCCccc-cCcCCCCCCCcccEEEeCCCcEEEEEEEecCceeeee
Q 042677 393 EL----EVIDSWHLDGFGFYTVGYGI---------GDWNPQL-RSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWNL 458 (504)
Q Consensus 393 ~~----~~~HP~HlHG~~F~Vv~~g~---------g~~~~~~-~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~ 458 (504)
.+ .+.||||||||+||||+++. |.|++.. ...+|+.+|.|||||.|+++||++|||+|||||.|||
T Consensus 422 ~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~ 501 (559)
T 2q9o_A 422 DPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLF 501 (559)
T ss_dssp CTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEE
T ss_pred CCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEE
Confidence 76 78999999999999999987 7776531 2458899999999999999999999999999999999
Q ss_pred eeccchhhhhccEEEEEEecCCCCCCCCCCC--CC-CcccCcCCC
Q 042677 459 RSQLLKNWHLGQELYVRVYDADPNPNKERPP--PE-NLLLCDGCQ 500 (504)
Q Consensus 459 HCHil~H~~~Gm~~~~~V~~~~~~~~~~~~~--p~-~~~~c~~~~ 500 (504)
||||++|++.|||..|.|...+ +++...+ |+ .++.|..|.
T Consensus 502 HCHil~H~~~GM~~~~~v~~~~--~~~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 502 HCHIAWHVSGGLSVDFLERPAD--LRQRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp EECCHHHHHTTCEEEEEECHHH--HGGGCCHHHHHHHHHHHHHHH
T ss_pred EecchhHhhcCCeEEEEECcch--hhhccccCCchhhhhhccccc
Confidence 9999999999999999886432 3333333 55 468997654
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=4.6e-81 Score=648.58 Aligned_cols=376 Identities=19% Similarity=0.295 Sum_probs=296.0
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeC-CCceeeeeecch--
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTK-DQIGSFFYFPSI-- 77 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~-~~~Gt~wYH~H~-- 77 (504)
++|||+|||++||+|+|+|+|+|+++++|||||+++. +++||++ ++|.||++|+|+|+++ +++||||||||.
T Consensus 43 ~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~---~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~ 117 (439)
T 2xu9_A 43 SFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPIS--PKVDDPF---LEIPPGESWTYEFTVPKELAGTFWYHPHLHG 117 (439)
T ss_dssp BSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCC--TTTSCTT---CCBCTTCEEEEEEECCSSCCEEEEEECCCTT
T ss_pred cccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCC--ccccCCc---ccCCCCCeEEEEEecCCCCCcceEeccCCCC
Confidence 5899999999999999999999999999999999875 4899987 6799999999999985 489999999997
Q ss_pred --hhhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHH-HHhccccCCCCCCCeEEEccccCCCCCCC
Q 042677 78 --NFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRS-KMKKMQWAYFNPPDWMLMNGKVSLMNPNT 154 (504)
Q Consensus 78 --~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~liNG~~~~~~~~~ 154 (504)
..|+++||+|+|||+++.+..... ..++|++|+|+||+++....... .+.. ..+ ..++.++|||+..
T Consensus 118 ~t~~q~~~Gl~G~liV~~~~~~~~~~-~~~~e~~l~l~D~~~~~~~~~~~~~~~~-~~g--~~~~~~~iNG~~~------ 187 (439)
T 2xu9_A 118 RVAPQLFAGLLGALVVESSLDAIPEL-REAEEHLLVLKDLALQGGRPAPHTPMDW-MNG--KEGDLVLVNGALR------ 187 (439)
T ss_dssp SHHHHHHTTCCEEEEECCGGGGSHHH-HTSEEEEEEEEEECEETTEECCCCHHHH-HHC--CCCSEEEETTEES------
T ss_pred chHHHHHhhCeEEEEEcCccccCccC-CCCCcEEEEEEeeeeCCCCcCCCCcccc-ccC--CCCCEEEECCccC------
Confidence 479999999999999865322111 24789999999999875300000 0000 011 2357999999988
Q ss_pred CCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc-cceeeceEEEcCCcEEEEEEEecCCCceeEEEE
Q 042677 155 TEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT-NKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233 (504)
Q Consensus 155 ~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~ 233 (504)
|.++|++| +|||||||++..+.+.|+|+||+|+||+.||.++ +|..++++.|+|||||||+|++++ +|+|+|++
T Consensus 188 ---p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~ 262 (439)
T 2xu9_A 188 ---PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQA 262 (439)
T ss_dssp ---CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEEEE
T ss_pred ---CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEEEe
Confidence 89999999 9999999999999999999999999999999997 899999999999999999999996 89999999
Q ss_pred eccCCcCC--------------CCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCC
Q 042677 234 SPKLSHAD--------------ANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNI 299 (504)
Q Consensus 234 ~~~~~~~~--------------~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p 299 (504)
.....+.. ........++++|.+...+ .++|... .... .+ + .+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~p~~l---------~~~~----~l------~--~~ 319 (439)
T 2xu9_A 263 LPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LPLPKAL---------SPFP----TL------P--AP 319 (439)
T ss_dssp ECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CCCCSCC---------CCCC----CC------C--CC
T ss_pred cccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--ccCcccC---------CCcc----cC------C--CC
Confidence 75432211 0112356788999775421 1222110 0000 00 0 01
Q ss_pred ccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEe
Q 042677 300 LTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVAT 379 (504)
Q Consensus 300 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (504)
. .++++. |...+ . ...|+|||++|..+..+ +.
T Consensus 320 ~-------~~r~~~---l~~~~---~-g~~~~iNg~~~~~~~~~----------------------------------~~ 351 (439)
T 2xu9_A 320 V-------VTRRLV---LTEDM---M-AARFFINGQVFDHRRVD----------------------------------LK 351 (439)
T ss_dssp S-------EEEEEE---EEEEG---G-GTEEEETTBCCCTTCCC----------------------------------EE
T ss_pred C-------cceEEE---EEeec---c-CceEeECCEECCCCCCc----------------------------------ee
Confidence 1 124444 43321 1 14699999998643221 46
Q ss_pred eeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceeeeee
Q 042677 380 GIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWNLR 459 (504)
Q Consensus 380 ~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~H 459 (504)
++.|++++|+|+|.+.+.||||||||+||||+++.+.+ .+|.|||||.|+++++++|||++||||.|+||
T Consensus 352 ~~~g~~~~~~~~N~~~~~HP~HLHG~~F~Vl~~~g~~~----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~H 421 (439)
T 2xu9_A 352 GQAQTVEVWEVENQGDMDHPFHLHVHPFQVLSVGGRPF----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFH 421 (439)
T ss_dssp ECTTCEEEEEEEECSSSCEEEEESSCCBEEEEETTEEC----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEE
T ss_pred cCCCCEEEEEEEcCCCCCCCceeCCCcEEEEeeCCCCC----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEE
Confidence 78999999999999999999999999999999975533 36889999999999999999999999999999
Q ss_pred eccchhhhhccEEEEEEe
Q 042677 460 SQLLKNWHLGQELYVRVY 477 (504)
Q Consensus 460 CHil~H~~~Gm~~~~~V~ 477 (504)
|||++|++.|||..++|.
T Consensus 422 CHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 422 CHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp ESSHHHHHTTCEEEEEEC
T ss_pred CCcchhhhcCCcEEEEeC
Confidence 999999999999999984
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=9.5e-80 Score=639.39 Aligned_cols=379 Identities=16% Similarity=0.196 Sum_probs=294.2
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecch---
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSI--- 77 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~--- 77 (504)
++|||+|||++||+|+|+|+|+|+++++|||||+++... +||+| ||+|+||++|+|+|++++++||||||||.
T Consensus 46 ~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~--~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~ 121 (451)
T 2uxt_A 46 RYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP--ARMMSPNADWAPVLPIRQNAATLWYHANTPNR 121 (451)
T ss_dssp SSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG--GGCBCTTCEECCEEECCSCSEEEEEEECCTTT
T ss_pred cccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC--cCcCCCCCeEEEEEEcCCCCcceEEecCCCCc
Confidence 589999999999999999999999999999999998754 99999 99999999999999985559999999998
Q ss_pred -hhhhhCCccccEEEeCCCCcCCCCCC--CCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEEEccccCCCCCCC
Q 042677 78 -NFQKAGGGFGPIRINNRIAINVPFPK--PEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNT 154 (504)
Q Consensus 78 -~~~~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~ 154 (504)
..|+++||+|+|||+++.....+++. .++|++|+|+||+++.+.++.. ... ......+++++|||+..
T Consensus 122 t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~-~~~--~~~~~~~d~~liNG~~~------ 192 (451)
T 2uxt_A 122 TAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY-NEP--GSGGFVGDTLLVNGVQS------ 192 (451)
T ss_dssp HHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC-CCC--SSSCCCCSEEEETTEES------
T ss_pred hhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec-ccc--cCCCCcCCEEEECCccc------
Confidence 68999999999999986543332222 4789999999999876543211 001 11234679999999998
Q ss_pred CCcceEEEecCCEEEEEEEecCCCeeEEEEE-cCceeeEeecCCCcc-cceeeceEEEcCCcEEEEEEEecCCCceeEEE
Q 042677 155 TEHESFTVTKGKTYRFRISNVGTAWSFNFRI-QNHRMVLVETEGSYT-NKIKLDSLDVHVGQSYSVLVTADKNPADYYIV 232 (504)
Q Consensus 155 ~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~ 232 (504)
|.++|++| +|||||||++..+.+.|+| +||+|+|||.||.++ +|..++++.|+|||||||+|++++ ++.|+|+
T Consensus 193 ---p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~ 267 (451)
T 2uxt_A 193 ---PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSN-GDEVSIT 267 (451)
T ss_dssp ---CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEECTT-CCCEEEE
T ss_pred ---ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEeCC-CCEEEEE
Confidence 89999999 9999999999999999999 899999999999987 799999999999999999999984 6899999
Q ss_pred EeccCCcCC-------CCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCCccceee
Q 042677 233 ASPKLSHAD-------ANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYFSE 305 (504)
Q Consensus 233 ~~~~~~~~~-------~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~~~ 305 (504)
+........ ........++++|........ .....| ..|.+....+ .+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~-~~~~~p----------------~~L~~~~~~~--~~------ 322 (451)
T 2uxt_A 268 CGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL-VTDSLP----------------MRLLPTEIMA--GS------ 322 (451)
T ss_dssp C----------------CCCCSCCEEEEEEECSCCC-----CCC----------------SCSSSSCCCC--CC------
T ss_pred ecCccccccccccccccCCCCCCcceEEEEecCCCcC-ccccCc----------------cccCCCCCCC--CC------
Confidence 875432111 011223457888876542110 000011 0011100011 01
Q ss_pred eeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCCcE
Q 042677 306 INATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGW 385 (504)
Q Consensus 306 ~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 385 (504)
...++++. |.. .|+|||++|..++. .+.++.|++
T Consensus 323 ~~~~~~~~---l~~---------~~~iNg~~f~~~~~----------------------------------~~~~~~G~~ 356 (451)
T 2uxt_A 323 PIRSRDIS---LGD---------DPGINGQLWDVNRI----------------------------------DVTAQQGTW 356 (451)
T ss_dssp CSEEEEEE---ECS---------SSSBTTBCCCTTCC----------------------------------CEEEETTCE
T ss_pred CcceEEEE---Eee---------EEEECCEeCCCCCC----------------------------------cEEcCCCCE
Confidence 12345555 431 58999999864321 156789999
Q ss_pred EEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCcee----eeeeec
Q 042677 386 IEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGM----WNLRSQ 461 (504)
Q Consensus 386 v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~----w~~HCH 461 (504)
++|+|+|. +.||||||||+||||+++.. .+++.+|.|||||.| +++++|+|+|||||. ||||||
T Consensus 357 ~~~~l~N~--~~HP~HLHGh~F~Vl~~~G~--------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCH 424 (451)
T 2uxt_A 357 ERWTVRAD--EPQAFHIEGVMFQIRNVNGA--------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQ 424 (451)
T ss_dssp EEEEEEEE--EEEEEEETTCEEEEEEETTB--------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEES
T ss_pred EEEEEECC--CCcCeEECCceEEEEeeCCc--------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCC
Confidence 99999998 78999999999999999532 145667999999999 899999999999988 999999
Q ss_pred cchhhhhccEEEEEEecCC
Q 042677 462 LLKNWHLGQELYVRVYDAD 480 (504)
Q Consensus 462 il~H~~~Gm~~~~~V~~~~ 480 (504)
|++|++.|||..|+|.+.+
T Consensus 425 il~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 425 TLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp SHHHHHTTCEEEEEEECSC
T ss_pred chhHHhCCCcEEEEEccCc
Confidence 9999999999999998654
No 11
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=6.7e-79 Score=631.94 Aligned_cols=379 Identities=18% Similarity=0.232 Sum_probs=293.4
Q ss_pred CCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecc----h
Q 042677 2 FPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPS----I 77 (504)
Q Consensus 2 ~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H----~ 77 (504)
+|||+|||++||+|+|+|+|+|+++++|||||+++. +++||+|+ |+|.||++|+|+|++++++|||||||| .
T Consensus 35 ~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~~~--~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~ 110 (448)
T 3aw5_A 35 VLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVN--WHNDAHPS--FAITPGESYNYSFDVVNRAGTYLYHPHPHGLT 110 (448)
T ss_dssp EESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCC--HHHHTCGG--GCBCTTCEEEEEEECCSCSEEEEEEECCTTTH
T ss_pred ccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCC--CccCCCCC--ccCCCCCEEEEEEEcCCCCCceEeccCCCCch
Confidence 899999999999999999999999999999999875 56999995 999999999999998657999999999 7
Q ss_pred hhhhhCCccccEEEeCCCCcCCCCCCCC-cceeEEeeeeecccHHHHHHH--HhccccCCCCCCCeEEEccccCCCCCCC
Q 042677 78 NFQKAGGGFGPIRINNRIAINVPFPKPE-AEFDLLIGDWYQESYKEIRSK--MKKMQWAYFNPPDWMLMNGKVSLMNPNT 154 (504)
Q Consensus 78 ~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~e~~l~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~liNG~~~~~~~~~ 154 (504)
..|+++||+|+|||+++... .+.+ ++ +|++|+|+||+++. .++... ..... ....++.++|||+..
T Consensus 111 ~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~--~~~~~~~~liNG~~~------ 179 (448)
T 3aw5_A 111 AKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMI--AGFLGNAVLVNGVKD------ 179 (448)
T ss_dssp HHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHH--HCCCCSEEEETTEET------
T ss_pred HHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-Ccccccccccccc--cCccccEEEECCccc------
Confidence 79999999999999987654 2222 25 89999999999876 332110 00011 123568999999998
Q ss_pred CCcceEEEecCCEEEEEEEecCCCeeEEEEE--cC---ceeeEeecCCCccc-ceeeceEEEcCCcEEEEEEEecCCCce
Q 042677 155 TEHESFTVTKGKTYRFRISNVGTAWSFNFRI--QN---HRMVLVETEGSYTN-KIKLDSLDVHVGQSYSVLVTADKNPAD 228 (504)
Q Consensus 155 ~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i--~g---h~~~via~DG~~~~-p~~~d~v~l~~geR~dv~v~~~~~~g~ 228 (504)
+.++|++| +|||||||++..+.+.|+| +| |+|+|||.||.+++ |..++++.|+|||||||+|+++ .+.
T Consensus 180 ---p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~ 253 (448)
T 3aw5_A 180 ---AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGV 253 (448)
T ss_dssp ---CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEE
T ss_pred ---ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEECC--CCc
Confidence 89999999 9999999999999999999 99 99999999999998 9999999999999999999997 478
Q ss_pred eEEEEeccCCcCC----------CCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccC
Q 042677 229 YYIVASPKLSHAD----------ANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRN 298 (504)
Q Consensus 229 y~i~~~~~~~~~~----------~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~ 298 (504)
|+|++.....+.. ........++++|.+...... |. .+. . +.. .+ .
T Consensus 254 y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~-----~L~----~-------lp~---~~--~ 309 (448)
T 3aw5_A 254 YLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP---VE-----ALS----D-------PPP---EP--P 309 (448)
T ss_dssp EEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC---CC-----CCS----C-------CCC---CC--C
T ss_pred eEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC---cc-----ccC----C-------CCC---CC--C
Confidence 9999876532111 111235677888876542111 11 000 0 000 01 0
Q ss_pred CccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEE
Q 042677 299 ILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVA 378 (504)
Q Consensus 299 p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (504)
+. ..++++. |... ...|+|||++|... .|+ +
T Consensus 310 ~~------~~~~~~~---l~~~------~~~~~iNg~~~~~~-~p~---------------------------------~ 340 (448)
T 3aw5_A 310 KP------TRTRRFA---LSLS------GMQWTINGMFWNAS-NPL---------------------------------F 340 (448)
T ss_dssp CC------SEEEEEE---EEEE------TTEEEETTBCCCTT-CTT---------------------------------C
T ss_pred CC------CceEEEE---EeCC------CceeeECCCcCCCC-CCc---------------------------------e
Confidence 11 2345555 4321 23599999998642 111 2
Q ss_pred e-eeCCcEEEEEEEeCC-CCcceeeecCcceEEEeeccccCCc-cccCcC----CCCCCCcccEEEeCCCcEEEEE--EE
Q 042677 379 T-GIHRGWIEIVLKNEL-EVIDSWHLDGFGFYTVGYGIGDWNP-QLRSRY----NLYDPVVRSTVQVYPGAWTAVY--AY 449 (504)
Q Consensus 379 ~-~~~g~~v~ivi~N~~-~~~HP~HlHG~~F~Vv~~g~g~~~~-~~~~~~----~~~~p~~rDTv~vp~~g~~~ir--f~ 449 (504)
. ++.|++|+|+|+|.+ .+.||||||||+||||+++ |.+.. .....+ +..++.|||||.|+|+++++|+ |+
T Consensus 341 ~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~ 419 (448)
T 3aw5_A 341 EHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFD 419 (448)
T ss_dssp CCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEEC
T ss_pred eccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEec-CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEec
Confidence 3 678999999999998 8999999999999999994 44421 111122 2334579999999999999665 99
Q ss_pred ---ecCceeeeeeeccchhhhhccEEEEEEe
Q 042677 450 ---LDNPGMWNLRSQLLKNWHLGQELYVRVY 477 (504)
Q Consensus 450 ---adnpG~w~~HCHil~H~~~Gm~~~~~V~ 477 (504)
+||| |+|||||++|++.|||..|+|.
T Consensus 420 ~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 420 AKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp GGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred ccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 9999 9999999999999999999883
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=9.2e-79 Score=642.31 Aligned_cols=401 Identities=15% Similarity=0.190 Sum_probs=296.5
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCC----------------------CeeeeeCCcCCCCCCCCCCCcc--c-CCcCCCC
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDE----------------------PLLFTWNGIQQRLNSWQDGVSG--T-NCPIQPG 55 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~----------------------~~siH~HG~~~~~~~~~DG~~~--~-~~~i~pg 55 (504)
++|||+|||++||+|+|+|+|+|++ +|+|||||+++. +++||+|+ + +|+|.||
T Consensus 54 ~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~--~~~DG~p~~~i~~g~i~pG 131 (513)
T 2wsd_A 54 LFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDGYPEAWFSKDFEQTG 131 (513)
T ss_dssp BSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC--GGGSCCTTSCBCGGGSSBC
T ss_pred CccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC--CccCCCCcccccCCcccCC
Confidence 5899999999999999999999975 899999999875 56999996 5 9999999
Q ss_pred CeE---EEEEEeCCCceeeeeecchh----hhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHHHHh
Q 042677 56 TNW---TYVFQTKDQIGSFFYFPSIN----FQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRSKMK 128 (504)
Q Consensus 56 ~~~---~y~~~~~~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~ 128 (504)
++| +|+|++.+++||||||||.. .|+++||+|+|||+++...+.+....+.|++|+|+||+++.+.++.....
T Consensus 132 ~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~ 211 (513)
T 2wsd_A 132 PYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSA 211 (513)
T ss_dssp TTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGGCCCCGGGEEEEEEEEEEECTTSCEECCSS
T ss_pred CccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccccCCCCCCcEEEEEEeeecCCCCceecccc
Confidence 555 99999756799999999985 48999999999999976544444456889999999999876533211000
Q ss_pred c---------cccCCCCCCCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCc-eeeEeecCCC
Q 042677 129 K---------MQWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNH-RMVLVETEGS 198 (504)
Q Consensus 129 ~---------~~~~~~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh-~~~via~DG~ 198 (504)
. ..+.....++++||||+.+ +.++|++| +|||||||++..+.+.|+|+|| +|+|||+||.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~d~~liNG~~~---------p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~ 281 (513)
T 2wsd_A 212 PENPSPSLPNPSIVPAFCGETILVNGKVW---------PYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGG 281 (513)
T ss_dssp CSSCCTTSCSSCCCSCCCCSEEEETTEES---------CEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTE
T ss_pred cccccccccccccccccccceEEECCccc---------ceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEccCCC
Confidence 0 0011234679999999998 88999885 8999999999999999999999 9999999999
Q ss_pred cc-cceeeceEEEcCCcEEEEEEEecCCCcee-EEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccc
Q 042677 199 YT-NKIKLDSLDVHVGQSYSVLVTADKNPADY-YIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQL 276 (504)
Q Consensus 199 ~~-~p~~~d~v~l~~geR~dv~v~~~~~~g~y-~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~ 276 (504)
++ +|..+++|.|++||||||+|++++.+|++ .+.... .+..........++++|..+...........|.
T Consensus 282 ~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~--~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~------ 353 (513)
T 2wsd_A 282 LLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSA--GCGGDVNPETDANIMQFRVTKPLAQKDESRKPK------ 353 (513)
T ss_dssp EEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECC--CSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCS------
T ss_pred cccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecc--cccccCCCCCCcceEEEEeccCcccCccCCCCc------
Confidence 98 79999999999999999999999767863 333322 111111112345788887653211000001110
Q ss_pred cccccccccccccccCCCCccCCccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCc
Q 042677 277 SIDQAKDIRGCFVNSYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGV 356 (504)
Q Consensus 277 ~~~~~~~~~~~l~~~~~~p~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~ 356 (504)
.+.. + + ..+ .. ....++++. |...+. ..+...|+|||.+|..+.
T Consensus 354 ~l~~-------~-~--~~~----~~---~~~~~~~~~---l~~~~~-~~g~~~~~iNg~~~~~~~--------------- 397 (513)
T 2wsd_A 354 YLAS-------Y-P--SVQ----HE---RIQNIRTLK---LAGTQD-EYGRPVLLLNNKRWHDPV--------------- 397 (513)
T ss_dssp BCSC-------C-G--GGC----CC---CEEEEEEEE---EEEEEC-TTSCEEEEETTBCTTSCC---------------
T ss_pred cccC-------C-C--Ccc----cC---CCcceEEEE---EEeecC-CCCCceEeECCccCCCcc---------------
Confidence 0000 0 0 001 00 012344444 433221 124467899999885321
Q ss_pred cccCCCCCCCCCCCcccceEEEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccc---cCCccccCcCCCC-----
Q 042677 357 YELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIG---DWNPQLRSRYNLY----- 428 (504)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g---~~~~~~~~~~~~~----- 428 (504)
.+.++.|++++|+|+|.+.+.||||||||+||||+++.+ .|++.. .+++.
T Consensus 398 --------------------~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~--~~~~~~~~~~ 455 (513)
T 2wsd_A 398 --------------------TETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESG--ELSYTGPAVP 455 (513)
T ss_dssp --------------------CBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHC--CCCBSSCCBC
T ss_pred --------------------cEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccccccccc--cccccCCCCC
Confidence 034678999999999999999999999999999999752 232211 12222
Q ss_pred ----CCCcccEEEeCCCcEEEEEEEe-cCceeeeeeeccchhhhhccEEEEEEecC
Q 042677 429 ----DPVVRSTVQVYPGAWTAVYAYL-DNPGMWNLRSQLLKNWHLGQELYVRVYDA 479 (504)
Q Consensus 429 ----~p~~rDTv~vp~~g~~~irf~a-dnpG~w~~HCHil~H~~~Gm~~~~~V~~~ 479 (504)
++.|||||.|+|+++++|+|++ ||||.|+|||||++|++.|||..|+|.++
T Consensus 456 ~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 456 PPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp CCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred CCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 3569999999999999999998 89999999999999999999999999754
No 13
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.3e-78 Score=641.29 Aligned_cols=394 Identities=13% Similarity=0.101 Sum_probs=299.4
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchh--
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSIN-- 78 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~-- 78 (504)
++|||+|||++||+|+|+|+|+|+++++|||||+++.. .+||++ ||+|.||++|+|+|++.+++||||||||.+
T Consensus 65 ~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~ 140 (534)
T 3abg_A 65 MSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--EDITEPGSFKDYYYPNRQSARTLWYHDHAMHI 140 (534)
T ss_dssp CSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS--SSCBSSCSCCCEEECCCSSSCEEEEEECCTTC
T ss_pred cCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC--CCCCCCCCeEEEEEecCCcceeEEEecCcccc
Confidence 68999999999999999999999999999999998764 699987 899999999999999755589999999985
Q ss_pred --hhhhCCccccEEEeCCCCcCCCCCC--CCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEEEccccCCCCCCC
Q 042677 79 --FQKAGGGFGPIRINNRIAINVPFPK--PEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNT 154 (504)
Q Consensus 79 --~~~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~ 154 (504)
.|+++||+|+|||+++.....+++. .+.|++|+|+||+++.+.++.. ..+ .....++|.++|||+.+
T Consensus 141 t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~--~~~-~~~~~~gd~~lvNG~~~------ 211 (534)
T 3abg_A 141 TAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVT--TNG-ELNSFWGDVIHVNGQPW------ 211 (534)
T ss_dssp HHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCC--CTT-CSSCCCCSEEEETTEES------
T ss_pred chhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceec--cCC-CCccccCceeccCCccC------
Confidence 5899999999999997654444332 2678999999999875433211 011 11223578999999998
Q ss_pred CCcceEEEecCCEEEEEEEecCCCeeEEEEEcC-------ceeeEeecCCCc-ccceeeceEEEcCCcEEEEEEEecCCC
Q 042677 155 TEHESFTVTKGKTYRFRISNVGTAWSFNFRIQN-------HRMVLVETEGSY-TNKIKLDSLDVHVGQSYSVLVTADKNP 226 (504)
Q Consensus 155 ~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~g-------h~~~via~DG~~-~~p~~~d~v~l~~geR~dv~v~~~~~~ 226 (504)
+.++|++ ++|||||||++..+.+.|+|++ |+|+|||+||++ .+|..+++|.|++||||||+|++++.+
T Consensus 212 ---p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~ 287 (534)
T 3abg_A 212 ---PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYA 287 (534)
T ss_dssp ---CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCT
T ss_pred ---ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCC
Confidence 8899998 5899999999999999999987 999999999985 589999999999999999999999767
Q ss_pred c-eeEEEEeccC-CcCCC-CCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCCccce
Q 042677 227 A-DYYIVASPKL-SHADA-NSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYF 303 (504)
Q Consensus 227 g-~y~i~~~~~~-~~~~~-~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~ 303 (504)
| +|+|++.... .+... .......++++|..+..+........| ..+.. .+.+ .+.
T Consensus 288 g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P----------------~~L~~-~~~p--~~~--- 345 (534)
T 3abg_A 288 GKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP----------------ANLRD-VPFP--SPT--- 345 (534)
T ss_dssp TSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC----------------CCCCC-CSCC--CCC---
T ss_pred CceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc----------------ccccc-CCCC--CCc---
Confidence 7 6999975321 11100 111234578888765421000000001 01110 0011 010
Q ss_pred eeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCC
Q 042677 304 SEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHR 383 (504)
Q Consensus 304 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 383 (504)
...++++. +.. ....|+|||.+|..+..|++ +.++.|
T Consensus 346 --~~~~~~~~---~~~------~~~~w~iNG~~f~~~~~p~l--------------------------------~~v~~G 382 (534)
T 3abg_A 346 --TNTPRQFR---FGR------TGPTWTINGVAFADVQNRLL--------------------------------ANVPVG 382 (534)
T ss_dssp --CCCCEEEE---CSC------CCSTTCCCCBTTBCTTSCCC--------------------------------CEECTT
T ss_pred --cccceEEE---Eec------cCceeEECCcccCCCCCcce--------------------------------eeccCC
Confidence 11345554 432 12358999999975544421 246789
Q ss_pred cEEEEEEEeCC-CCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEE-ecCceeeeeeec
Q 042677 384 GWIEIVLKNEL-EVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAY-LDNPGMWNLRSQ 461 (504)
Q Consensus 384 ~~v~ivi~N~~-~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~-adnpG~w~~HCH 461 (504)
++++|+|+|.+ .+.||||||||+||||+++.|.+.. ..+++++ .|||||.|+|+++++|||+ +||||.|+||||
T Consensus 383 ~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~---~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCH 458 (534)
T 3abg_A 383 TVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNAR---TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCH 458 (534)
T ss_dssp CEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSS---CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEES
T ss_pred CEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcC---cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecC
Confidence 99999999987 4699999999999999997654321 1245556 7999999999999999998 899999999999
Q ss_pred cchhhhhccEEEEEEecCC
Q 042677 462 LLKNWHLGQELYVRVYDAD 480 (504)
Q Consensus 462 il~H~~~Gm~~~~~V~~~~ 480 (504)
|++|++.|||..|+|...+
T Consensus 459 il~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 459 NLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CHHHHHTTCEEEEEECSSC
T ss_pred hHHHHhcCCceEEEEEecc
Confidence 9999999999999998665
No 14
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=9.2e-77 Score=616.90 Aligned_cols=382 Identities=19% Similarity=0.237 Sum_probs=286.7
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCC-ceeeeeecch--
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQ-IGSFFYFPSI-- 77 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~-~Gt~wYH~H~-- 77 (504)
++|||+||+++||+|+|+|+|+|+++|||||||+++. +++||+| ||+|.||++|+|+|+++++ +||||||||.
T Consensus 78 ~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~p--q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~ 153 (481)
T 3zx1_A 78 LVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVP--PDQDGSP--HDPILAGEERIYRFEIPQDSAGTYWYHPHPHY 153 (481)
T ss_dssp BSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT--TSCBCTTCEEEEEEECCTTCCEEEEEECCCTT
T ss_pred CCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccC--CccCCCc--cCcCCCCCeEEEEEeCCCCCCceEEEeecCCC
Confidence 5899999999999999999999999999999999874 6799998 9999999999999998543 8999999996
Q ss_pred --hhhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHH-HHhccccCCCCCCCeEEEccccCCCCCCC
Q 042677 78 --NFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRS-KMKKMQWAYFNPPDWMLMNGKVSLMNPNT 154 (504)
Q Consensus 78 --~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~liNG~~~~~~~~~ 154 (504)
..|+++||+|+|||+++.....++ +.++ ++|+||+++.+.++.. ....... ...++.++|||+..
T Consensus 154 ~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~~~~~~~~~~~~--g~~gd~~lvNG~~~------ 221 (481)
T 3zx1_A 154 TASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQIPNNNLNDWLN--GREGEFVLINGQFK------ 221 (481)
T ss_dssp THHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSCCCCCCHHHHHH--CCCCSEEEETTEES------
T ss_pred cchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCccccccchhhcc--CCcCCEEEECCccC------
Confidence 589999999999999976543333 5555 9999999875433210 0000001 12468999999998
Q ss_pred CCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc-cceeeceEEEcCCcEEEEEEEecCCCceeEEEE
Q 042677 155 TEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT-NKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233 (504)
Q Consensus 155 ~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~ 233 (504)
|.++|++|+ ||||||++..+.+.|+|+||.|+|||.||.++ +|..+++|.|+|||||||+|+++ +++.|.|.+
T Consensus 222 ---p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~ 295 (481)
T 3zx1_A 222 ---PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLES 295 (481)
T ss_dssp ---CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEE
T ss_pred ---ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEE
Confidence 899999999 99999999999999999999999999998765 89999999999999999999998 478899987
Q ss_pred eccCCcCC-CCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCCccceeeeeeeeEE
Q 042677 234 SPKLSHAD-ANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYFSEINATFTY 312 (504)
Q Consensus 234 ~~~~~~~~-~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~~~~~~~~~~ 312 (504)
........ .........++++..... +.++|... .+....+ .+. .++++
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~lP~~l-------------------~~~~~~~--~~~-------~~r~~ 345 (481)
T 3zx1_A 296 AYYDRDKMMVKEEPNTLFLANINLKKE--NVELPKNL-------------------KIFKPSE--EPK-------EFKEI 345 (481)
T ss_dssp CCCCCCCSSCCCCCCCEEEEEEEEECC--CCCCCSCS-------------------CCCCCCC--CCC-------EEEEE
T ss_pred ecccccCccccCCCCceeEEEEecCCC--CccCCccc-------------------cCCCCCC--CCC-------cEEEE
Confidence 54322110 011122333443332211 11222210 0000001 111 24444
Q ss_pred eeeeeccccc---c--cCCc--------eEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEe
Q 042677 313 LRSKVMRSLA---G--IDGA--------PLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVAT 379 (504)
Q Consensus 313 ~~~~l~~~~~---~--~~~~--------~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (504)
. |...+. . ..+. ..|+|||+.|.... | .+.
T Consensus 346 ~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~-~---------------------------------~~~ 388 (481)
T 3zx1_A 346 I---MSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLKR-I---------------------------------DLS 388 (481)
T ss_dssp E---EEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTTC-C---------------------------------CEE
T ss_pred E---EeccchhcccccccccccccccccceeEECCEeCCCCC-c---------------------------------eEE
Confidence 4 332110 0 0011 24999999885211 1 156
Q ss_pred eeCCcEEEEEEEeCCCCcceeeecCcceEEEeec-cccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceeeee
Q 042677 380 GIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYG-IGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWNL 458 (504)
Q Consensus 380 ~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g-~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~ 458 (504)
++.|++|+|+|.|.+.+.|||||||+.|||++++ +|.- ....++.|||||.|+|+++++|+|+|||||.|+|
T Consensus 389 ~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~~~~~g~~-------~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~ 461 (481)
T 3zx1_A 389 SKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKV-------QKAEFRALRDTINVRPNEELRLRMKQDFKGLRMY 461 (481)
T ss_dssp EETTCCEEEEEEECSSSCEEEEETTCCEEEEEEEETTEE-------EECSSCCEESEEEECTTCEEEEEECCCSCEEEEE
T ss_pred eCCCCEEEEEEEcCCCCceeEEEeccEEEEEEecccCCC-------CCcccCcccceEEECCCCEEEEEEEcCCCeeEEE
Confidence 8899999999999999999999999999999983 2210 1223478999999999999999999999999999
Q ss_pred eeccchhhhhccEEEEEEec
Q 042677 459 RSQLLKNWHLGQELYVRVYD 478 (504)
Q Consensus 459 HCHil~H~~~Gm~~~~~V~~ 478 (504)
||||++|++.|||..|+|.+
T Consensus 462 HCHil~H~d~GMm~~~~V~~ 481 (481)
T 3zx1_A 462 HCHILEHEDLGMMGNLEVKE 481 (481)
T ss_dssp EESSHHHHHTTCEEEEEEEC
T ss_pred EcCChHHHhcCCceEEEEeC
Confidence 99999999999999999973
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1.8e-76 Score=642.00 Aligned_cols=430 Identities=13% Similarity=0.092 Sum_probs=286.5
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCC-----------------------------------------eeeeeCCcCCCCC
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEP-----------------------------------------LLFTWNGIQQRLN 39 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~-----------------------------------------~siH~HG~~~~~~ 39 (504)
|+|||||+|++||+|+|+|+|+|+++ |+|||||+++.
T Consensus 61 ~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~-- 138 (612)
T 3gyr_A 61 QVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTG-- 138 (612)
T ss_dssp BSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCC--
T ss_pred cccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccCCCCceEEcCCCccC--
Confidence 68999999999999999999999643 68899999874
Q ss_pred CCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecch----hhhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeee
Q 042677 40 SWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSI----NFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDW 115 (504)
Q Consensus 40 ~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~----~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~ 115 (504)
+++||++ ||+|.||++|+|+|++.+++||||||||. +.|+++||+|+|||+++.+...+...+++|++|+|+||
T Consensus 139 ~~~DGv~--q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw 216 (612)
T 3gyr_A 139 GGNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDREIPLLIADR 216 (612)
T ss_dssp TTTSCCG--GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEE
T ss_pred CcccCcc--cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccccccCCCCCCccEEEEEEEE
Confidence 5799988 99999999999999986668999999996 57999999999999987766655556789999999999
Q ss_pred ecccHHHHHHHHh--------cc-------ccCCCCCCCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCee
Q 042677 116 YQESYKEIRSKMK--------KM-------QWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWS 180 (504)
Q Consensus 116 ~~~~~~~~~~~~~--------~~-------~~~~~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~ 180 (504)
+++.+.+...... .. .......++.++|||+.+ |.+.++. ++|||||||++..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~---------p~~~v~~-~~yRlRliNas~~~~ 286 (612)
T 3gyr_A 217 NLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW---------PYADVDD-GWYRLRLVNASNARI 286 (612)
T ss_dssp CEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES---------CEEEEES-SEEEEEEEECCSSCC
T ss_pred ecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc---------ceEeccC-cEEEEEEEeccCCcc
Confidence 8865433211000 00 001123468999999998 8898875 579999999999999
Q ss_pred EEEEEcCc-------eeeEeecCCCccc-cee------eceEEEcCCcEEEEEEEecCCCceeEEEEeccCC-cCC---C
Q 042677 181 FNFRIQNH-------RMVLVETEGSYTN-KIK------LDSLDVHVGQSYSVLVTADKNPADYYIVASPKLS-HAD---A 242 (504)
Q Consensus 181 ~~~~i~gh-------~~~via~DG~~~~-p~~------~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~~~~-~~~---~ 242 (504)
+.|+|++| +|+|||+||++++ |+. +++|.|++||||||+|++++.+|.++........ ... .
T Consensus 287 ~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (612)
T 3gyr_A 287 YNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDP 366 (612)
T ss_dssp EEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBG
T ss_pred eeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCc
Confidence 99999998 4999999999983 554 4589999999999999999877765544432211 110 1
Q ss_pred CCCceeEEEEEeeCCCCC--CCCCCCCCCCCCCccccccccccccccccccCCCCccCCccceeeeeeeeEEeeeeec--
Q 042677 243 NSSIYGVAVLHYDNSTTP--PIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYFSEINATFTYLRSKVM-- 318 (504)
Q Consensus 243 ~~~~~~~~il~y~~~~~~--~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~~~~~~~~~~~~~~l~-- 318 (504)
........+++|...... ....+|............ ................. .....................
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 444 (612)
T 3gyr_A 367 LGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSH-DIPHGHRLIVLTPPGTK-GSGGHPEIWEMAEVEDPADVQVP 444 (612)
T ss_dssp GGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCT-TSCCEEEEEEEECTTCT-TTTTCCEEEEEEECC-----CCS
T ss_pred cccccccceeeecccCCCCCCccccccccccccccccc-ccccccccccccccccc-ccccccccccccccccccccccc
Confidence 112233456666543221 111122111000000000 00000000000000000 000000000000000000000
Q ss_pred c-----cccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCCcEEEEEEEeC
Q 042677 319 R-----SLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNE 393 (504)
Q Consensus 319 ~-----~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~ 393 (504)
. ..........|.+|+..| .+...+.++.|++|+|+|+|.
T Consensus 445 ~~~~~~~~~~~~~~~~~~~n~~~~-----------------------------------~~~~~~~~~~g~~~~w~i~N~ 489 (612)
T 3gyr_A 445 AEGVIQVTGADGRTKTYRRTARTF-----------------------------------NDGLGFTIGEGTHEQWTFLNL 489 (612)
T ss_dssp CTTEEEEECTTSCEEEEEEEECST-----------------------------------TSCCCEEEETTCEEEEEEEEC
T ss_pred ccceeeeccCCCccccccccCccC-----------------------------------CCCcceEeCCCCEEEEEEEcC
Confidence 0 000000112233333322 122336788999999999999
Q ss_pred CCCcceeeecCcceEEEeeccccCCcc----------------ccCcCCCCCCCcccEEEeCCCcEEEEEEE-ecCceee
Q 042677 394 LEVIDSWHLDGFGFYTVGYGIGDWNPQ----------------LRSRYNLYDPVVRSTVQVYPGAWTAVYAY-LDNPGMW 456 (504)
Q Consensus 394 ~~~~HP~HlHG~~F~Vv~~g~g~~~~~----------------~~~~~~~~~p~~rDTv~vp~~g~~~irf~-adnpG~w 456 (504)
+.+.||||||||+||||+++.+.+... .....+..++.|||||.|+++++++|||+ +||||.|
T Consensus 490 ~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w 569 (612)
T 3gyr_A 490 SPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRF 569 (612)
T ss_dssp SSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEE
T ss_pred CCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcce
Confidence 999999999999999999864332211 11234567789999999999999999998 7999999
Q ss_pred eeeeccchhhhhccEEEEEEecCCC
Q 042677 457 NLRSQLLKNWHLGQELYVRVYDADP 481 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V~~~~~ 481 (504)
|||||||+|||.|||..|+|.+++.
T Consensus 570 ~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 570 MYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp EEEESSHHHHHTTCEEEEEEECHHH
T ss_pred EEcCCChHHHhCcCCcceEEeCCcc
Confidence 9999999999999999999997764
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.8e-74 Score=599.35 Aligned_cols=391 Identities=18% Similarity=0.234 Sum_probs=280.4
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecch---
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSI--- 77 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~--- 77 (504)
++|||+||+++||+|+|+|+|+|+++++|||||+++. +++||+| ||+|.||++|+|+|++.+++||||||||.
T Consensus 44 ~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~--~~~DG~p--~~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~ 119 (488)
T 3od3_A 44 NLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVP--GEVDGGP--QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGK 119 (488)
T ss_dssp SSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCC--HHHHCCT--TCCBCTTCEEEEEEECCSCSEEEEEECCCTTT
T ss_pred cCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccC--cccCCCC--cCcCcCCCeEEEEEecCCCceeEEEEecCCCc
Confidence 5899999999999999999999999999999999886 4699998 99999999999999985558999999997
Q ss_pred -hhhhhCCccccEEEeCCCCcCCCCCC--CCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEEEccccCCCCCCC
Q 042677 78 -NFQKAGGGFGPIRINNRIAINVPFPK--PEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNT 154 (504)
Q Consensus 78 -~~~~~~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~ 154 (504)
..|+++||+|+|||+++.....+++. ...|++++|+||+++.+.++....+.........++.++|||+.+
T Consensus 120 t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~------ 193 (488)
T 3od3_A 120 TGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIY------ 193 (488)
T ss_dssp HHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBSS------
T ss_pred chhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCcC------
Confidence 58999999999999986654433321 246899999999987543221000000000122468999999988
Q ss_pred CCcceEEEecCCEEEEEEEecCCCeeEEEEE-cCceeeEeecCCCcc-cceeeceEEEcCCcEEEEEEEecCCCceeEEE
Q 042677 155 TEHESFTVTKGKTYRFRISNVGTAWSFNFRI-QNHRMVLVETEGSYT-NKIKLDSLDVHVGQSYSVLVTADKNPADYYIV 232 (504)
Q Consensus 155 ~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i-~gh~~~via~DG~~~-~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~ 232 (504)
|.+.+ +|++|||||||++..+.+.|+| +||+|+|||+||.++ +|..+++|.|++||||||+|+++ +.+.|.|+
T Consensus 194 ---p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~ 268 (488)
T 3od3_A 194 ---PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVN-DNKPFDLV 268 (488)
T ss_dssp ---CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEEC-TTCCEEEE
T ss_pred ---ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeC-CCceEEEE
Confidence 77776 5789999999999999999999 699999999999986 89999999999999999999998 46789998
Q ss_pred EeccCCcCCC-CCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCCccceeeeeeeeE
Q 042677 233 ASPKLSHADA-NSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYFSEINATFT 311 (504)
Q Consensus 233 ~~~~~~~~~~-~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~~~~~~~~~ 311 (504)
+......... ........+++......+.+..+|.... . + ...+...+ ..+|+
T Consensus 269 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~---------~-------~---~~~~~~~~-------~~~r~ 322 (488)
T 3od3_A 269 TLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLS---------S-------L---PALPSLEG-------LTVRK 322 (488)
T ss_dssp ECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCC---------C-------C---CCCCCCTT-------CCEEE
T ss_pred EeccCCCCcccccccCccceeEecccccCCCCCCCcccc---------c-------C---CCCccccc-------ccceE
Confidence 7643221100 0011122333332211101111221100 0 0 00000000 01222
Q ss_pred Eeeeeecc-----------------cccc----------cCC-------------ceEEEEcceeeeCCCcchhhhhhhc
Q 042677 312 YLRSKVMR-----------------SLAG----------IDG-------------APLYTVNNVSYLTPETPLKLADKFA 351 (504)
Q Consensus 312 ~~~~~l~~-----------------~~~~----------~~~-------------~~~~~iNg~~~~~~~~p~l~~~~~~ 351 (504)
+... +.. .+.. ..+ ...|+|||+.|... .|
T Consensus 323 ~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~~-~~-------- 392 (488)
T 3od3_A 323 LQLS-MDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMN-KP-------- 392 (488)
T ss_dssp EEEE-ECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCTT-CC--------
T ss_pred EEEE-ecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCeeCCCC-CC--------
Confidence 2200 100 0000 001 01489999998532 11
Q ss_pred CCCCccccCCCCCCCCCCCcccceEEEeeeCCcEEEEEEEeCC-CCcceeeecCcceEEEeeccccCCccccCcCCCCCC
Q 042677 352 NGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNEL-EVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDP 430 (504)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~-~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p 430 (504)
.+.++.|++++|.|.|.+ .+.|||||||++|+|++++..... ..++
T Consensus 393 -------------------------~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~--------~~~~ 439 (488)
T 3od3_A 393 -------------------------MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPA--------AHRA 439 (488)
T ss_dssp -------------------------SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCC--------GGGS
T ss_pred -------------------------ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccc--------cccC
Confidence 156789999999999988 779999999999999998543221 1235
Q ss_pred CcccEEEeCCCcEEEEEEEec----CceeeeeeeccchhhhhccEEEEEE
Q 042677 431 VVRSTVQVYPGAWTAVYAYLD----NPGMWNLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 431 ~~rDTv~vp~~g~~~irf~ad----npG~w~~HCHil~H~~~Gm~~~~~V 476 (504)
.|||||.|+ |+++.|+|++| |||.|||||||++|+|.|||..|+|
T Consensus 440 ~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 440 GWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp SSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred CceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 799999999 99999999974 5789999999999999999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=6.4e-73 Score=601.92 Aligned_cols=422 Identities=15% Similarity=0.150 Sum_probs=293.4
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCC-----------------------------------------eeeeeCCcCCCCC
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEP-----------------------------------------LLFTWNGIQQRLN 39 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~-----------------------------------------~siH~HG~~~~~~ 39 (504)
++|||||+|++||+|+|+|+|+|++. +++||||+++..
T Consensus 61 ~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~- 139 (612)
T 2g23_A 61 QVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTGG- 139 (612)
T ss_dssp BSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCCT-
T ss_pred ccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccccccccccccccccccCCceEEEcCCCCCCC-
Confidence 58999999999999999999999753 899999998764
Q ss_pred CCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchh----hhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeee
Q 042677 40 SWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSIN----FQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDW 115 (504)
Q Consensus 40 ~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~----~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~ 115 (504)
.+||++ ||+|.||++|+|+|++.+++||||||||.. .|+++||+|+|||+++.....+++.+|.|++|+|+||
T Consensus 140 -~~DG~p--~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw 216 (612)
T 2g23_A 140 -GNDGWA--DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDREIPLLIADR 216 (612)
T ss_dssp -TTSCCG--GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEE
T ss_pred -ccCCCC--cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcccccccCCCCcceEEEEEEEE
Confidence 599998 999999999999999755799999999986 4999999999999987654444445699999999999
Q ss_pred ecccHHHHH---HH------Hhccc-cCC-----CCCCCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCee
Q 042677 116 YQESYKEIR---SK------MKKMQ-WAY-----FNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWS 180 (504)
Q Consensus 116 ~~~~~~~~~---~~------~~~~~-~~~-----~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~ 180 (504)
+++.+.+.. .. +.... .+. ...++.+||||+.+ |.++|++| +|||||||++..+.
T Consensus 217 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~---------p~~~V~~g-~yRlRliNas~~r~ 286 (612)
T 2g23_A 217 NLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW---------PYADVDDG-WYRLRLVNASNARI 286 (612)
T ss_dssp CEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES---------CEEEEESS-EEEEEEEECCSSCC
T ss_pred eccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC---------CeEEecCC-eEEEEEEecCCCeE
Confidence 997542110 00 00000 001 13579999999998 89999999 99999999999999
Q ss_pred EEEEEcCc-------eeeEeecCCCcc-cceeec------eEEEcCCcEEEEEEEecCCCc-eeEEEEeccCCcCCCC--
Q 042677 181 FNFRIQNH-------RMVLVETEGSYT-NKIKLD------SLDVHVGQSYSVLVTADKNPA-DYYIVASPKLSHADAN-- 243 (504)
Q Consensus 181 ~~~~i~gh-------~~~via~DG~~~-~p~~~d------~v~l~~geR~dv~v~~~~~~g-~y~i~~~~~~~~~~~~-- 243 (504)
+.|+|++| +|+|||.||+++ +|+.++ +|.|++||||||+|++++.+| +|+|+...........
T Consensus 287 ~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~ 366 (612)
T 2g23_A 287 YNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDP 366 (612)
T ss_dssp EEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBG
T ss_pred EEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCcccc
Confidence 99999999 899999999999 599999 999999999999999998766 6888876421111000
Q ss_pred -CCceeEEEEEee--CCCCCCCCCCCCCCCC--CCccccccccccccc-ccccc-CCCCccCCccceeeeeeee-----E
Q 042677 244 -SSIYGVAVLHYD--NSTTPPIGIPPKGLDP--FNLQLSIDQAKDIRG-CFVNS-YHRNTRNILTYFSEINATF-----T 311 (504)
Q Consensus 244 -~~~~~~~il~y~--~~~~~~~~~~p~~p~~--~~~~~~~~~~~~~~~-~l~~~-~~~p~~~p~~~~~~~~~~~-----~ 311 (504)
.......++++. ......+..+|..... ..+.... ....+. .+... .......+. ...... .
T Consensus 367 ~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~--~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 440 (612)
T 2g23_A 367 LGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDI--PHGHRLIVLTPPGTKGSGGHPE----IWEMAEVEDPAD 440 (612)
T ss_dssp GGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTS--CCEEEEEEECCTTCTTSTTCCC----EEEEEEEC----
T ss_pred ccCccccceEEEEEccCCCCCCCCCChhhccccccCCccc--ccceeEEeeccccccccccccc----eeeccccccccc
Confidence 000111344443 3221111123321100 0000000 000000 00000 000000000 000000 0
Q ss_pred Eeeeeeccc----ccccCC-ceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCCcEE
Q 042677 312 YLRSKVMRS----LAGIDG-APLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWI 386 (504)
Q Consensus 312 ~~~~~l~~~----~~~~~~-~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 386 (504)
+. +... ....++ ...|+|||..|... ..+.++.|++|
T Consensus 441 ~~---~~~~~~~~~~~~~g~~~~~~iNG~~~~~~-----------------------------------~~~~v~~G~~v 482 (612)
T 2g23_A 441 VQ---VPAEGVIQVTGADGRTKTYRRTAATFNDG-----------------------------------LGFTIGEGTHE 482 (612)
T ss_dssp -C---CSCTTEEEEECTTSCEEEEEEEECSTTSC-----------------------------------CCEEEETTCEE
T ss_pred cc---cccccceeeeccCCceeEEEECCccCCCC-----------------------------------CceEecCCCEE
Confidence 00 0000 000122 24588888877421 12568899999
Q ss_pred EEEEEeCCCCcceeeecCcceEEEeeccccCCcc----------------ccCcCCCCCCCcccEEEeCCCcEEEEEEEe
Q 042677 387 EIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQ----------------LRSRYNLYDPVVRSTVQVYPGAWTAVYAYL 450 (504)
Q Consensus 387 ~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~----------------~~~~~~~~~p~~rDTv~vp~~g~~~irf~a 450 (504)
+|+|.|.+.+.|||||||+.|+|++++.+.++.- ....++..++.|||||.|+|+++++|+|+|
T Consensus 483 ~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~ 562 (612)
T 2g23_A 483 QWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKF 562 (612)
T ss_dssp EEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEEC
T ss_pred EEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEe
Confidence 9999999999999999999999999864322110 002245566789999999999999999999
Q ss_pred c-CceeeeeeeccchhhhhccEEEEEEecCC
Q 042677 451 D-NPGMWNLRSQLLKNWHLGQELYVRVYDAD 480 (504)
Q Consensus 451 d-npG~w~~HCHil~H~~~Gm~~~~~V~~~~ 480 (504)
+ |||.|||||||++|++.|||..|+|...+
T Consensus 563 ~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~ 593 (612)
T 2g23_A 563 DGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp CSCCEEEEEEESSHHHHTTTCEEEEEEECHH
T ss_pred CCCCccEEEEeCchhHhhcCCceEEEECchh
Confidence 9 99999999999999999999999997543
No 18
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=4.5e-55 Score=476.75 Aligned_cols=219 Identities=15% Similarity=0.222 Sum_probs=168.5
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCC----CCCCCCCCcc--c-CCcCCCCCeEEEEEEeCC-------
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQR----LNSWQDGVSG--T-NCPIQPGTNWTYVFQTKD------- 66 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~----~~~~~DG~~~--~-~~~i~pg~~~~y~~~~~~------- 66 (504)
++|||+|||++||+|+|+|+|.|++++||||||+++. +.+++||+++ + ||+|+||++|+|+|++++
T Consensus 71 ~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq~~I~PG~s~tY~f~v~~~~gP~~~ 150 (742)
T 2r7e_A 71 GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVFPGGSHTYVWQVLKENGPMAS 150 (742)
T ss_dssp TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSSSSSCCTTCEECCEEEECGGGSCCSS
T ss_pred CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCcccccccCcCCCCCeEEEEEEeccccCCCcC
Confidence 5899999999999999999999999999999999874 3334444432 6 999999999999999853
Q ss_pred --Cceeeeeecchhh--hhhCCccccEEEeCCCCcCCCCCCCCcceeEEeee------eecccHHHHHHHHhccccCCCC
Q 042677 67 --QIGSFFYFPSINF--QKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGD------WYQESYKEIRSKMKKMQWAYFN 136 (504)
Q Consensus 67 --~~Gt~wYH~H~~~--~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~~~~~~~~~ 136 (504)
++||||||||.+. |+++||+|+|||+++...........+|+++++++ |+.+........+... ....
T Consensus 151 d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~~~~~~~~--~~~~ 228 (742)
T 2r7e_A 151 DPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAA--SARA 228 (742)
T ss_dssp SCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC-------CC--SCCC
T ss_pred CCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccccccccccccccCCCc--cccc
Confidence 4699999999874 89999999999998654322111123788888764 4443321110001111 1112
Q ss_pred CCCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCe-eEEEEEcCceeeEeecCCCcccceeeceEEEcCCcE
Q 042677 137 PPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAW-SFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQS 215 (504)
Q Consensus 137 ~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR 215 (504)
..+.++|||+... ..+.+++++|++|||||+|++... .|.|||+||.|+|++. .+|++.|.|||+
T Consensus 229 ~~~~~~ING~~~~------~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~--------~~Dtv~v~Pg~~ 294 (742)
T 2r7e_A 229 WPKMHTVNGYVNR------SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH--------RQASLEISPITF 294 (742)
T ss_dssp CCCCCEETTBCTB------CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE--------ECCSCCCCTTCC
T ss_pred cCceEEECCccCC------CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE--------ecceEEeCCCcE
Confidence 3467899999752 136799999999999999999875 7899999999999852 478899999999
Q ss_pred EEEEEEecCCCceeEEEEecc
Q 042677 216 YSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 216 ~dv~v~~~~~~g~y~i~~~~~ 236 (504)
++|.++++ ++|.|+++|+..
T Consensus 295 ~~v~~~~~-~pG~w~~hCH~~ 314 (742)
T 2r7e_A 295 LTAQTLLM-DLGQFLLFCHIS 314 (742)
T ss_dssp CEEEECCC-SCSEECCCCCSS
T ss_pred EEEEEEeC-CCeeEEEEeCCh
Confidence 99999998 699999999864
No 19
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=3.7e-51 Score=463.43 Aligned_cols=426 Identities=14% Similarity=0.128 Sum_probs=289.2
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCC----CCCCCCCCcc--c-CCcCCCCCeEEEEEEeCCC------
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQR----LNSWQDGVSG--T-NCPIQPGTNWTYVFQTKDQ------ 67 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~----~~~~~DG~~~--~-~~~i~pg~~~~y~~~~~~~------ 67 (504)
++|||+|||++||+|+|+|+|.|+++++|||||+++. +.+|.||+++ + ||+|+||++|+|+|+++++
T Consensus 91 ~~PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~ 170 (1065)
T 2j5w_A 91 GFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEG 170 (1065)
T ss_dssp TTSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTT
T ss_pred CCcCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccC
Confidence 4899999999999999999999999999999999886 5578888888 7 9999999999999998544
Q ss_pred ---ceeeeeecchhh--hhhCCccccEEEeCCCCcCCCCC-CCCcceeEEeee------eecccHHHHHHHH-hccccC-
Q 042677 68 ---IGSFFYFPSINF--QKAGGGFGPIRINNRIAINVPFP-KPEAEFDLLIGD------WYQESYKEIRSKM-KKMQWA- 133 (504)
Q Consensus 68 ---~Gt~wYH~H~~~--~~~~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~l~d------~~~~~~~~~~~~~-~~~~~~- 133 (504)
+||||||||.+. |+++||+|+|||+++.....+.. ..|+|++|+|+| |++... +..+. +.+...
T Consensus 171 d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~--~~~~~~~p~~~~~ 248 (1065)
T 2j5w_A 171 DGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDN--IKTYCSEPEKVDK 248 (1065)
T ss_dssp SCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHH--HHHHCSCGGGCCT
T ss_pred CCCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccch--hhhhhcCcccccc
Confidence 599999999974 56899999999998765332222 358899999994 554322 11111 111000
Q ss_pred -CC---CCCCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCC-eeEEEEEcCceeeEeecCCCcccceeeceE
Q 042677 134 -YF---NPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTA-WSFNFRIQNHRMVLVETEGSYTNKIKLDSL 208 (504)
Q Consensus 134 -~~---~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v 208 (504)
.. ..++.++|||+.+. ..+.++|++|++|||||||++.. ..+.|+|+||.|++ +|..+|+|
T Consensus 249 ~~~~~~~~~~~~~iNG~~~~------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv 314 (1065)
T 2j5w_A 249 DNEDFQQSNRMYSVNGYTFG------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTI 314 (1065)
T ss_dssp TCHHHHHHTEEEEETTEETT------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEE
T ss_pred ccccccccCcEEEECCccCC------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEE
Confidence 00 01347999999852 13789999999999999999985 58999999999993 67899999
Q ss_pred EEcCCcEEEEEEEecCCCceeEEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccc
Q 042677 209 DVHVGQSYSVLVTADKNPADYYIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCF 288 (504)
Q Consensus 209 ~l~~geR~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l 288 (504)
.|+||||+||+|++++ +|.|+|+|+..... .....+.++|.+...+++.+.|..+ ....+ +..+.++.|++
T Consensus 315 ~I~pGer~dVlv~~~~-pG~y~i~~h~~~h~-----~~Gm~~~~~V~~~~~~~~~~~~~g~--~~~~~-~i~A~e~~wdy 385 (1065)
T 2j5w_A 315 NLFPATLFDAYMVAQN-PGEWMLSCQNLNHL-----KAGLQAFFQVQECNKSSSKDNIRGK--HVRHY-YIAAEEIIWNY 385 (1065)
T ss_dssp EECBTCEEEEEEECCS-CEEEEEEECSHHHH-----HTTCEEEEEEECSCCCCCCCCCTTS--EEEEE-EEEEEEEEEES
T ss_pred EECCCcEEEEEEEeCC-CeeEEEEecCcchh-----hCCCEEEEEEecCCCcccccccccc--ceeEE-EEeceeccccc
Confidence 9999999999999985 89999999865321 1245677888765443333333221 01112 33566677777
Q ss_pred cccCCC----CccCCccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCC
Q 042677 289 VNSYHR----NTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPV 364 (504)
Q Consensus 289 ~~~~~~----p~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~ 364 (504)
.++... ....+++++ ...+ |.......++.....++ +.|.. ++|+.. .+.
T Consensus 386 ~~~~~~~~~~~~~~~~~s~-----~~~~----l~~~~~~ig~~y~k~v~-~~y~d---------------~~f~~~-~~~ 439 (1065)
T 2j5w_A 386 APSGIDIFTKENLTAPGSD-----SAVF----FEQGTTRIGGSYKKLVY-REYTD---------------ASFTNR-KER 439 (1065)
T ss_dssp CTTSBCTTTCCBTTCTTCT-----THHH----HCCBTTBCCSEEEEEEE-EEESS---------------TTCCSB-CCC
T ss_pred CCCCcccccccccCCCccc-----chhh----hccCCcccCceEeeeee-ecccC---------------CceEEc-CcC
Confidence 665421 001233221 1111 11111122344444454 55542 122211 111
Q ss_pred CCCCCCcccceEEEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEE
Q 042677 365 NASNVDAIRGVFVATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWT 444 (504)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~ 444 (504)
.|......--..++.++.|++|+|+|.|.....|+||+||+.|++++.|.. +.... .+..+...++...|.||+..
T Consensus 440 ~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s~h~hG~~f~~~~~g~~-~~~~~---~~~~~~~~~~~~~v~Pg~~~ 515 (1065)
T 2j5w_A 440 GPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLSIEPIGVRFNKNNEGTY-YSPNY---NPQSRSVPPSASHVAPTETF 515 (1065)
T ss_dssp CGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBCCEEESSBCCGGGCSBC-CBCC----------CCCCSSCBCTTCEE
T ss_pred CcccccccccCceEEEeCCCEEEEEEEECCCCCccCcccceeeeccCCCcc-ccccc---ccccCCccCCCcccCCCCcE
Confidence 111001112245799999999999999999999999999999999988642 21110 00011224555667889977
Q ss_pred EEEEEe---cCce-------eeeeeeccch--hhhhccEEEEEEecCCC
Q 042677 445 AVYAYL---DNPG-------MWNLRSQLLK--NWHLGQELYVRVYDADP 481 (504)
Q Consensus 445 ~irf~a---dnpG-------~w~~HCHil~--H~~~Gm~~~~~V~~~~~ 481 (504)
+.++.. +.|| .|+||+|+.. .+..|+...+.|.....
T Consensus 516 ~y~w~v~~~~~p~~~dp~c~~~~y~s~vd~~~d~~sGLiGpllic~~~~ 564 (1065)
T 2j5w_A 516 TYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGS 564 (1065)
T ss_dssp EEEEECCGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTC
T ss_pred EEEEEccCCcCCCCCCCCeeEEEEeccCCcccccccccccceEEecccc
Confidence 777765 4566 6999999876 56789999999987653
No 20
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1.1e-48 Score=387.62 Aligned_cols=242 Identities=22% Similarity=0.382 Sum_probs=198.8
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeeecchhh
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSINF 79 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~ 79 (504)
++|||+|||++||+|+|+|+|.++.+++|||||+++.++.++||+|++ ||+|+||++++|+|++ +++||||||||.+.
T Consensus 30 ~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~ 108 (318)
T 3g5w_A 30 QVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKA-EPAGTMWYHCHVNV 108 (318)
T ss_dssp BSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEECCSSH
T ss_pred ccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEc-CCCEEEEEEccCCh
Confidence 589999999999999999999999999999999998877789999999 9999999999999997 68999999999875
Q ss_pred hh---hCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHHHHhccccC-CCCCCCeEEEccccCCCCCCCC
Q 042677 80 QK---AGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWA-YFNPPDWMLMNGKVSLMNPNTT 155 (504)
Q Consensus 80 ~~---~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~liNG~~~~~~~~~~ 155 (504)
+. .+||+|+|||+++...+.+. ..++|++|+|+||+++.... .+..+ ....++.++|||+.+..
T Consensus 109 ~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~------~~~~~~~~~~~d~~~ING~~~~~----- 176 (318)
T 3g5w_A 109 NEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANK------PGEGGIPGDVFDYYTINAKSFPE----- 176 (318)
T ss_dssp HHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTC------TTCCCCTTCCCCEEEETTBCBTS-----
T ss_pred hhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccc------cccCCCCCCcCcEEEEcCcCCCC-----
Confidence 43 58999999999865322111 34889999999998754211 11111 12246899999998743
Q ss_pred CcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc-cceeeceEEEcCCcEEEEEEEecCCCceeEEEEe
Q 042677 156 EHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT-NKIKLDSLDVHVGQSYSVLVTADKNPADYYIVAS 234 (504)
Q Consensus 156 ~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~ 234 (504)
...+++++|++|||||+|++.. .+.|||+||.|+||+.||.++ +|..+|++.|.||||+||+++++ +||.|.++|+
T Consensus 177 -~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~-~pG~w~~hCH 253 (318)
T 3g5w_A 177 -TQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMD-NPGLWMIHDH 253 (318)
T ss_dssp -SCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC-SCSEEEEEES
T ss_pred -CccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECC-CCeeEEEEec
Confidence 2459999999999999999976 589999999999999999988 78999999999999999999998 6999999999
Q ss_pred ccCCcCCC-CCCceeEEEEEeeCCC
Q 042677 235 PKLSHADA-NSSIYGVAVLHYDNST 258 (504)
Q Consensus 235 ~~~~~~~~-~~~~~~~~il~y~~~~ 258 (504)
...-..+. .......++|+|++..
T Consensus 254 ~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 254 VDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp SGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred cHHHhhccCcCCCCCEEEEEECCCC
Confidence 65322110 0113457889998754
No 21
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.3e-47 Score=396.80 Aligned_cols=371 Identities=16% Similarity=0.095 Sum_probs=244.5
Q ss_pred CCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhC
Q 042677 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAG 83 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~ 83 (504)
||+|+|++||+|+|+|+|.+...+++||||.... .+|+|.||++++|.|++ .++||||||||...|+.+
T Consensus 54 ~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~----------~~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~ 122 (447)
T 2dv6_A 54 NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAAR----------SAIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQA 122 (447)
T ss_dssp SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEE----------CCCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHH
T ss_pred CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCcc----------cceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhC
Confidence 8999999999999999999977799999997321 17999999999999997 579999999999889999
Q ss_pred CccccEEEeCCCCcCCCC--C---CCCcceeEEeeeeecccHH--HHHH-HHhccccCCCCCCCeEEEccccCCCCCCCC
Q 042677 84 GGFGPIRINNRIAINVPF--P---KPEAEFDLLIGDWYQESYK--EIRS-KMKKMQWAYFNPPDWMLMNGKVSLMNPNTT 155 (504)
Q Consensus 84 Gl~G~liV~~~~~~~~~~--~---~~~~e~~l~l~d~~~~~~~--~~~~-~~~~~~~~~~~~~~~~liNG~~~~~~~~~~ 155 (504)
||+|.|+|+++....... . ....+++..+ |+...... .+.. ....... .....+.++|||+..
T Consensus 123 Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~~~~~~~~~-~g~~~~~~~~NG~~p------- 193 (447)
T 2dv6_A 123 GMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDLETVEVKGQLD-DNTTYTYWTFNGKVP------- 193 (447)
T ss_dssp TCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEEEEEEEEEEEE-TTEEEEEEEETTBBS-------
T ss_pred CCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEEEEEEEEEecc-CCceeEEEEECCccC-------
Confidence 999999999865321100 0 0001111111 11000000 0000 0000000 001235799999863
Q ss_pred CcceEEEecCCEEEEEEEecCC-CeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEEe
Q 042677 156 EHESFTVTKGKTYRFRISNVGT-AWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVAS 234 (504)
Q Consensus 156 ~~p~~~v~~G~~~rlRliNa~~-~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~ 234 (504)
.|.+++++|++|||||+|.+. ...+.+++||. ++.||.+ +.+.|.||||+++.++++ .+|+||++|+
T Consensus 194 -gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~------~~~~i~pG~~~~~~~~~~-~~G~~~yh~h 261 (447)
T 2dv6_A 194 -GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA------AFTQTDPGEETVVTFKAL-IPGIYVYHCA 261 (447)
T ss_dssp -CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG------GGCCBCTTCEEEEEEECC-SCEEEEEECC
T ss_pred -CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC------ccEEeCCCCEEEEEEECC-CCeEEEEEeC
Confidence 289999999999999999986 34567777763 3679873 334699999999999998 4799999998
Q ss_pred ccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCCccceeeeeeeeEEee
Q 042677 235 PKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYFSEINATFTYLR 314 (504)
Q Consensus 235 ~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~~~~~~~~~~~~ 314 (504)
....... ......+.+.|.... .+|. .+....+ ...+ +..... .. ..+ ...+.
T Consensus 262 ~~~~~~~--~~~Gl~g~l~v~~~~-----~~P~----~d~~~~~-~~~~--~~~~~~--~~---~~g-------~~~~~- 314 (447)
T 2dv6_A 262 TPSVPTH--ITNGMYGLLLVEPEG-----GLPQ----VDREFYV-MQGE--IYTVKS--FG---TSG-------EQEMD- 314 (447)
T ss_dssp SSSHHHH--HHTTCEEEEEEECTT-----CSCC----CSEEEEE-EEEE--ECBSSC--TT---CCE-------ECCBB-
T ss_pred CCChHHH--HhCCCEEEEEEeCCC-----CCCC----CCeeEEE-Eecc--cccCCc--cc---ccc-------cccCC-
Confidence 5210000 012235666676432 1221 1111000 0000 000000 00 000 00000
Q ss_pred eeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCCcEEEEEEEeCC
Q 042677 315 SKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNEL 394 (504)
Q Consensus 315 ~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~ 394 (504)
+... .......|.|||+.|.... ..++.++.|++++|+|.|.+
T Consensus 315 --~~~~--~~~~~~~~~iNG~~~~~~~---------------------------------~~~~~v~~g~~vrlrliN~~ 357 (447)
T 2dv6_A 315 --YEKL--INEKPEYFLFNGSVGSLTR---------------------------------SHPLYASVGETVRIFFGVGG 357 (447)
T ss_dssp --HHHH--HTTCCSEEEETTSTTCCCC---------------------------------CCCEEECTTCEEEEEEEEEE
T ss_pred --hHHh--hccCCCEEEECCcccCCCC---------------------------------CcceEECCCCEEEEEEEeCC
Confidence 1110 0112356899998753210 12367889999999999987
Q ss_pred -CCcceeeecCcceEEEeeccccCCccccCcCCCCCCC-cccEEEeCCCcEEEEEEEecCceeeeeeeccchhhhhccEE
Q 042677 395 -EVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPV-VRSTVQVYPGAWTAVYAYLDNPGMWNLRSQLLKNWHLGQEL 472 (504)
Q Consensus 395 -~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~-~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~~~Gm~~ 472 (504)
...||||||||+|+||+.+.+ + +..|. +|||+.|+++++++|+|++||||.|+||||+++|++.||+.
T Consensus 358 ~~~~h~~hlhGh~f~vv~~dG~-~---------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~ 427 (447)
T 2dv6_A 358 PNFTSSFHVIGEIFDHVYSLGS-V---------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVG 427 (447)
T ss_dssp SSCCEEEEEETCCEEEECGGGC-S---------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCE
T ss_pred CCceEeEEEcCcEEEEEEcCCc-c---------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEE
Confidence 678999999999999998532 2 22344 79999999999999999999999999999999999999999
Q ss_pred EEEEecCC
Q 042677 473 YVRVYDAD 480 (504)
Q Consensus 473 ~~~V~~~~ 480 (504)
.++|....
T Consensus 428 ~~~v~~~~ 435 (447)
T 2dv6_A 428 FLNVDGPK 435 (447)
T ss_dssp EEEECSCS
T ss_pred EEEEeCCC
Confidence 99997665
No 22
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=5.2e-47 Score=379.75 Aligned_cols=242 Identities=24% Similarity=0.455 Sum_probs=198.3
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeeecchhh
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSINF 79 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~ 79 (504)
++|||+|+|++||+|+|+|+|.++.+++|||||+++...+++||+|++ ||+|.||++|+|+|++ +++||||||||...
T Consensus 31 ~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~ 109 (339)
T 2zwn_A 31 QVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKA-DRIGTLWYHCHVNV 109 (339)
T ss_dssp BSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEEC-CSCEEEEEECCSSH
T ss_pred ccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEEC-CCCEEEEEEecCCc
Confidence 589999999999999999999999999999999999888889999999 9999999999999997 68999999999874
Q ss_pred --hhh-CCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHHHHhccccC-CCCCCCeEEEccccCCCCCCCC
Q 042677 80 --QKA-GGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWA-YFNPPDWMLMNGKVSLMNPNTT 155 (504)
Q Consensus 80 --~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~liNG~~~~~~~~~~ 155 (504)
|+. +||+|+|||+++.....+. ..++|++++|+||+..... ..+..+ ....++.++|||+.+..
T Consensus 110 ~~q~~~~Gl~G~liV~p~~~~~~~~-~~d~e~~l~l~d~~~~~~~------~~~~~g~~~~~~~~~~ING~~~~~----- 177 (339)
T 2zwn_A 110 NEHVGVRGMWGPLIVDPKQPLPIEK-RVTKDVIMMMSTWESAVAD------KYGEGGTPMNVADYFSVNAKSFPL----- 177 (339)
T ss_dssp HHHTTTSCCEEEEEEECSSCCTTGG-GCSEEEEEEEEEECGGGTT------CTTCCCSTTSCCCEEEETTBCTTS-----
T ss_pred hhhhhcCCceEeEEecCCCcccccc-cCCceEEEEeeheeccccc------ccCCCCCCccccceEEEccccCCC-----
Confidence 788 9999999999865422111 3478999999999863211 011111 11246899999998732
Q ss_pred CcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCccc-ceeeceEEEcCCcEEEEEEEecCCCceeEEEEe
Q 042677 156 EHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTN-KIKLDSLDVHVGQSYSVLVTADKNPADYYIVAS 234 (504)
Q Consensus 156 ~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~-p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~ 234 (504)
.+.+++++|++|||||+|++.. .+.|||+||.|+||+.||.+++ |..+|++.|.||||+||+|+++ ++|.|+++|+
T Consensus 178 -~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~-~pG~w~~hch 254 (339)
T 2zwn_A 178 -TQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEAD-NPGRFIFHDH 254 (339)
T ss_dssp -SCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECC-SCSEEEEEEC
T ss_pred -cccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeC-CCeeEEEEEe
Confidence 2459999999999999999965 7999999999999999999986 8889999999999999999998 5899999998
Q ss_pred ccCCcCCC-CCCceeEEEEEeeCCC
Q 042677 235 PKLSHADA-NSSIYGVAVLHYDNST 258 (504)
Q Consensus 235 ~~~~~~~~-~~~~~~~~il~y~~~~ 258 (504)
...-+.+. .......++++|++..
T Consensus 255 ~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 255 VDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp CGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred chhhcccccccCCCcEEEEEECCCC
Confidence 65321110 1123447899998754
No 23
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.7e-45 Score=417.08 Aligned_cols=385 Identities=12% Similarity=0.077 Sum_probs=252.9
Q ss_pred CCCC--CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCC-CCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecch
Q 042677 1 MFPG--PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRL-NSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSI 77 (504)
Q Consensus 1 ~~Pg--P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~-~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~ 77 (504)
++|| |+|++++||+|+++|.|. ++.+||||+++.+ +.++||++.+.|+|.||.+++|.|.+ +++||||||||.
T Consensus 626 ~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~pg~~~t~~~~~-~~~Gt~~~h~h~ 701 (1065)
T 2j5w_A 626 FMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDTANLFPQTSLTLHMWP-DTEGTFNVECLT 701 (1065)
T ss_dssp BCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESEEEECTTCEEEEEECC-CSCEEEEEEECS
T ss_pred EecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecceEeecCCceEEEEEec-CCCeEEEEecCC
Confidence 3678 889999999999999976 5569999999988 99999998768999999999999996 799999999999
Q ss_pred hhhhhCCccccEEEeCCCCcCCCCCCCCcceeEEe----eeeecccHHHHHHHHhccccCCCCCCCeEEEccccC-----
Q 042677 78 NFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLI----GDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVS----- 148 (504)
Q Consensus 78 ~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~----- 148 (504)
+.|+.+||+|.++|++......+...++.|.++.| .||++.+...+...+... .+.. +...++|+...
T Consensus 702 ~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~-~~~~--p~~~~~n~~~~~iG~t 778 (1065)
T 2j5w_A 702 TDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHL-QEQN--VSNAFLDKGEFYIGSK 778 (1065)
T ss_dssp HHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHH-HTCC--CCCTTTCCTTTCCCSE
T ss_pred CcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCC-CccC--ccceeecCCCccccce
Confidence 99999999999999986443333235578889999 899997655432211100 1111 22233333210
Q ss_pred -----C---C-CC--C-----------CCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeec
Q 042677 149 -----L---M-NP--N-----------TTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLD 206 (504)
Q Consensus 149 -----~---~-~~--~-----------~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d 206 (504)
+ . .. . .-..|.|.+++|+++++|+.|..... +.++.|| +++...++
T Consensus 779 Y~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~~~-~sih~HG--l~~~~~~~--------- 846 (1065)
T 2j5w_A 779 YKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATRP-YSIHAHG--VQTESSTV--------- 846 (1065)
T ss_dssp EEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSC-BCCEESS--CBCSCSCC---------
T ss_pred EeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCCCC-ceEeecc--ccccCCCC---------
Confidence 0 0 00 0 11348999999999999999997643 4555555 55544321
Q ss_pred eEEEcCCcEEEEEEEecCC---------CceeEEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCcccc
Q 042677 207 SLDVHVGQSYSVLVTADKN---------PADYYIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLS 277 (504)
Q Consensus 207 ~v~l~~geR~dv~v~~~~~---------~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~ 277 (504)
..+.||++++..+.+.+. +|.||++++.....+ ....+ .+.|.+....... ....+ .+.+..
T Consensus 847 -~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q-~~~GL--~G~liV~~~~~l~---~~~~~--~d~D~~ 917 (1065)
T 2j5w_A 847 -TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKD-LYSGL--IGPLIVCRRPYLK---VFNPR--RKLEFA 917 (1065)
T ss_dssp -CCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHH-HHTTC--EEEEEEECCC--------CCC--CEEEEE
T ss_pred -ceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHh-hhccc--cceeEecCccccc---ccCCC--cceEEE
Confidence 246799998888877542 258999987432100 00112 2333333322100 00001 111111
Q ss_pred c--cccc-ccccccccc--CCCCccCCccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcC
Q 042677 278 I--DQAK-DIRGCFVNS--YHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFAN 352 (504)
Q Consensus 278 ~--~~~~-~~~~~l~~~--~~~p~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~ 352 (504)
+ ..++ +..+.+... ...+ .|.. ++ . +... .......|.|||..|..
T Consensus 918 l~~~~~d~~~~~y~~~n~~~~~~--~P~~------v~--~----~~~~--~~~~~~~~~iNG~~~~~------------- 968 (1065)
T 2j5w_A 918 LLFLVFDENESWYLDDNIKTYSD--HPEK------VN--K----DDEE--FIESNKMHAINGRMFGN------------- 968 (1065)
T ss_dssp EEEEEEEGGGSTTHHHHHHHHCS--CGGG------CC--T----TCHH--HHHHTEEEEETTBCTTC-------------
T ss_pred EEEEeecCCcceeeccCcccccC--Cccc------cC--c----chhh--hhccCceEEECCccCCC-------------
Confidence 1 0000 000000000 0000 0100 00 0 0000 00012358899887531
Q ss_pred CCCccccCCCCCCCCCCCcccceEEEeeeCCcEEEEEEEeCC--CCcceeeecCcceEEEeeccccCCccccCcCCCCCC
Q 042677 353 GSGVYELDKFPVNASNVDAIRGVFVATGIHRGWIEIVLKNEL--EVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDP 430 (504)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~--~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p 430 (504)
...+.++.|++|+|+|.|.+ .+.||||||||.|+|++++ |
T Consensus 969 ----------------------~~~~~v~~G~~vr~~l~N~g~~~~~HpfHlHG~~F~vv~~~----------------p 1010 (1065)
T 2j5w_A 969 ----------------------LQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG----------------V 1010 (1065)
T ss_dssp ----------------------CCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETTTT----------------C
T ss_pred ----------------------CccEEeCCCCEEEEEEEeCCCCCcceeEEEcccEEEEEecC----------------C
Confidence 11256889999999999985 6789999999999998763 5
Q ss_pred CcccEEEeCCCcEEEEEEEecCceeeeeeeccchhhhhccEEEEEEecCC
Q 042677 431 VVRSTVQVYPGAWTAVYAYLDNPGMWNLRSQLLKNWHLGQELYVRVYDAD 480 (504)
Q Consensus 431 ~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~~~Gm~~~~~V~~~~ 480 (504)
.||||+.|+|+++++|+|+|||||.|+||||+++|++.|||..|+|.+.+
T Consensus 1011 ~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1011 YSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp EEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred ceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 69999999999999999999999999999999999999999999998665
No 24
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=3.3e-44 Score=357.63 Aligned_cols=235 Identities=23% Similarity=0.354 Sum_probs=191.9
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCC--CCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecch-
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMD--EPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSI- 77 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~--~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~- 77 (504)
++|||+|+|++||+|+|+|+|.++ .++++||||+. .+||++.. ..|.||++++|+|++ +++||||||||.
T Consensus 66 ~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~-----~~dG~~~~-~~i~PG~~~~y~f~~-~~~Gt~wyH~h~~ 138 (327)
T 1kbv_A 66 DVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT-----GQGGGAAA-TFTAPGRTSTFSFKA-LQPGLYIYHCAVA 138 (327)
T ss_dssp BSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGTTT-TCBCTTEEEEEEEEC-CSCEEEEEECCCS
T ss_pred ccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc-----cCCCCCcc-eeecCCCEEEEEEEC-CCCeEEEEEeCCC
Confidence 589999999999999999999995 58999999984 37887643 349999999999997 789999999996
Q ss_pred --hhhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHH-H---HHhccccCCCCCCCeEEEccccCCCC
Q 042677 78 --NFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIR-S---KMKKMQWAYFNPPDWMLMNGKVSLMN 151 (504)
Q Consensus 78 --~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~-~---~~~~~~~~~~~~~~~~liNG~~~~~~ 151 (504)
..|+.+||+|+|||+++.. .+..|+|++++++||+++...... . .+... ....++.++|||+.+..+
T Consensus 139 ~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~iNG~~~~~~ 211 (327)
T 1kbv_A 139 PVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKA---VAEQPEYVVFNGHVGALT 211 (327)
T ss_dssp SHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTTCCEEECBCHHHH---HHTCCSEEEETTSTTTTS
T ss_pred ChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccccccccccChhHh---ccCCCceEEEcCcccCCC
Confidence 5899999999999998542 123589999999999986421000 0 00000 012457999999998532
Q ss_pred CCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEE
Q 042677 152 PNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYI 231 (504)
Q Consensus 152 ~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i 231 (504)
. .+.+++++|++|||||+|++....+.|+|+||.|+||+.||.+++|..++++.|+||||+||+|+++ .+|.|+|
T Consensus 212 ~----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~-~pG~y~l 286 (327)
T 1kbv_A 212 G----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVD-IPGNYTL 286 (327)
T ss_dssp G----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEEC-SCEEEEE
T ss_pred C----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeC-CCeEEEE
Confidence 1 2679999999999999999998889999999999999999999999999999999999999999999 5899999
Q ss_pred EEeccCCcCCCCCCceeEEEEEeeCCC
Q 042677 232 VASPKLSHADANSSIYGVAVLHYDNST 258 (504)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~il~y~~~~ 258 (504)
+|+...... .....++++|++..
T Consensus 287 ~~h~~~~~~----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 287 VDHSIFRAF----NKGALGQLKVEGAE 309 (327)
T ss_dssp EESSTHHHH----HSSCEEEEEEESCC
T ss_pred Eeccccccc----cCCcEEEEEECCCC
Confidence 998654321 23468999998764
No 25
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=3.4e-43 Score=344.11 Aligned_cols=207 Identities=18% Similarity=0.263 Sum_probs=179.4
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeeecchh-
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSIN- 78 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~- 78 (504)
++|||+|||++||+|+|+|+|.++.+++|||||+++ +++||+|++ ||+|+||++++|+|++ +++||||||||..
T Consensus 62 ~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~ 137 (288)
T 3gdc_A 62 RIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIGAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSP 137 (288)
T ss_dssp BSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTSTTCSBCTTCEEEEEEEC-CSCEEEEEECCCSS
T ss_pred ccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCccceeECCCCEEEEEEEc-CCCccEEEEecCcc
Confidence 589999999999999999999999999999999963 579999999 9999999999999997 7899999999986
Q ss_pred --hhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEEEccccCCCCCCCCC
Q 042677 79 --FQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLMNGKVSLMNPNTTE 156 (504)
Q Consensus 79 --~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~~ 156 (504)
.|+.+||+|+|||+++...+ ..++|++|+++||+.++ + . .++.++|||+.+.. .
T Consensus 138 ~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~~----------g---~--~~~~~~iNG~~~~~-----~ 193 (288)
T 3gdc_A 138 LAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTDG----------G---D--DNEFYSVNGLPFHF-----M 193 (288)
T ss_dssp HHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCSS----------T---T--CCSEEEETTSTTHH-----H
T ss_pred hHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecCC----------C---C--CcceEEECcccccc-----c
Confidence 68999999999999865322 23799999999998752 1 1 34789999998721 0
Q ss_pred cceEEEecCCEEEEEEEecCCC-eeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEEec
Q 042677 157 HESFTVTKGKTYRFRISNVGTA-WSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASP 235 (504)
Q Consensus 157 ~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~ 235 (504)
.+.+++++|++|||||+|++.. ..+.|||+||.|+|++.++....|...|++.|.||||++|+++++ .||.|.++|+.
T Consensus 194 ~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH~ 272 (288)
T 3gdc_A 194 DFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFP-YPGKFMFHAHK 272 (288)
T ss_dssp HSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCC-SCEEEEEECSS
T ss_pred CcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECC-CCEEEEEEecC
Confidence 1469999999999999999965 379999999999999855444457889999999999999999998 79999999985
Q ss_pred c
Q 042677 236 K 236 (504)
Q Consensus 236 ~ 236 (504)
.
T Consensus 273 ~ 273 (288)
T 3gdc_A 273 T 273 (288)
T ss_dssp H
T ss_pred h
Confidence 4
No 26
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=5.2e-43 Score=350.32 Aligned_cols=106 Identities=25% Similarity=0.508 Sum_probs=90.5
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCC------------C
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKD------------Q 67 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~------------~ 67 (504)
++|||+|+|++||+|+|+|+|.++++++|||||+.+. .++||++ + ||+|.||++|+|+|++.. +
T Consensus 73 ~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~ 149 (343)
T 3cg8_A 73 SVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGS 149 (343)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCS
T ss_pred CccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-cccccccCCCEEEEEEEeCCCCcccccccCCCC
Confidence 5899999999999999999999999999999999875 5799999 6 999999999999999732 3
Q ss_pred ceeeeeecch------hhhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeee
Q 042677 68 IGSFFYFPSI------NFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGD 114 (504)
Q Consensus 68 ~Gt~wYH~H~------~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d 114 (504)
+||||||||. ..|+.+||+|+|||+++... . .|+|++++++|
T Consensus 150 ~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~--~---pd~e~~l~~~d 197 (343)
T 3cg8_A 150 AGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L---PDATHTIVFND 197 (343)
T ss_dssp CEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C---CSEEEEEEEET
T ss_pred ceEEEEecCccccccchhhhhcCCeEEEEEecCCCC--C---CCceEEEEccc
Confidence 5999999996 37899999999999986432 1 26677666654
No 27
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.2e-42 Score=344.01 Aligned_cols=212 Identities=19% Similarity=0.328 Sum_probs=175.6
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeC------------CCc
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTK------------DQI 68 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~------------~~~ 68 (504)
++|||+|||++||+|+|+|+|+|++++||||||+++. +.+||++..||+|.||++|+|+|++. .++
T Consensus 38 t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~--~~~dG~~~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~ 115 (313)
T 3tas_A 38 TIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYE--ISSDGTKQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSA 115 (313)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCSTTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSC
T ss_pred cccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCC--ccCCCCccccCCcCCCCEEEEEEEeccCCccccccccCCCc
Confidence 5899999999999999999999999999999999874 56999996699999999999999862 368
Q ss_pred eeeeeecchh------hhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEE
Q 042677 69 GSFFYFPSIN------FQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWML 142 (504)
Q Consensus 69 Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l 142 (504)
||||||||.. .|+++||+|+|||+++... ..|+|++|+++||+
T Consensus 116 gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e~~l~~~d~t-------------------------- 164 (313)
T 3tas_A 116 GYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRTHTIVFNDMT-------------------------- 164 (313)
T ss_dssp EEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEEEEEEEETTE--------------------------
T ss_pred eEEEEeecCcccccchhhhhccccCceEeeccccc-----cccccceeeccchh--------------------------
Confidence 9999999974 4688999999999986532 23899999998874
Q ss_pred EccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCccc---ceeeceEEEcCCcEEEEE
Q 042677 143 MNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTN---KIKLDSLDVHVGQSYSVL 219 (504)
Q Consensus 143 iNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~---p~~~d~v~l~~geR~dv~ 219 (504)
+||+.... .+.+.++.|++|||||+|++.. .+.|||+||.|+|++.||.... |..+|++.|.||||++++
T Consensus 165 ~Ng~~~~~------~~~l~v~~Ge~vr~~liN~g~~-~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~ 237 (313)
T 3tas_A 165 INNRPAHT------GPDFEATVGDRVEFVMITHGEY-YHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQ 237 (313)
T ss_dssp ETTCCTTC------CCCEEEETTCEEEEEEEEESSC-CEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEE
T ss_pred cccCCccc------ccccccccCCEEEEEEeccccc-ceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEE
Confidence 45544422 3679999999999999999964 6899999999999999998653 678999999999999999
Q ss_pred EEecC--CCceeEEEEeccCCcCCCCCCceeEEEEEeeCC
Q 042677 220 VTADK--NPADYYIVASPKLSHADANSSIYGVAVLHYDNS 257 (504)
Q Consensus 220 v~~~~--~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~ 257 (504)
|.+.+ +||.|.++|+...-. .....+++.+...
T Consensus 238 v~a~~~~nPG~w~~HCHi~~H~-----~~GM~~~f~V~~~ 272 (313)
T 3tas_A 238 VIAGEGVGAGAWMYHCHVQSHS-----DMGMVGLFLVKKP 272 (313)
T ss_dssp EETTTTTCSEEEEEEECSHHHH-----HTTCEEEEEEECT
T ss_pred EEeccCCCCEeEEEEeCChHHH-----HCCCeEEEEEECC
Confidence 98764 589999999954211 1234466666543
No 28
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=1e-41 Score=334.74 Aligned_cols=212 Identities=17% Similarity=0.311 Sum_probs=174.5
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeC------------CCc
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTK------------DQI 68 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~------------~~~ 68 (504)
++|||+|||++||+|+|+|+|.|++++||||||+++. +.+||++..||+|.||++|+|+|+++ .++
T Consensus 54 t~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~--~~~DG~~~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~ 131 (299)
T 3t9w_A 54 TVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYD--VNSDGTLMNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTA 131 (299)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCTTTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCC
T ss_pred CccCceEEEECCeEEEEEEEECCCCCccEEeCCcccC--CccCCCccccCccCCCCeEEEEEEeecccccCCCcCCCCCc
Confidence 5899999999999999999999999999999999764 57999984499999999999999974 268
Q ss_pred eeeeeecchh------hhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEE
Q 042677 69 GSFFYFPSIN------FQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWML 142 (504)
Q Consensus 69 Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l 142 (504)
||||||||.. .|+++||+|+|||+++.. . ..|+|+++++.+|.
T Consensus 132 gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--~---~~d~e~~l~~~~~~-------------------------- 180 (299)
T 3t9w_A 132 GYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--L---LPKRQFTVVFNDMM-------------------------- 180 (299)
T ss_dssp EEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--C---CCSEEEEEEEETTE--------------------------
T ss_pred eeEEEecCCcccccchhhhcccccceEEEecccc--c---Cccccceeeeeeee--------------------------
Confidence 9999999974 478999999999998653 1 23889999887653
Q ss_pred EccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCccc---ceeeceEEEcCCcEEEEE
Q 042677 143 MNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTN---KIKLDSLDVHVGQSYSVL 219 (504)
Q Consensus 143 iNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~---p~~~d~v~l~~geR~dv~ 219 (504)
+||+.... .+.++++.|+++||||+|++... ++|||+||.|+|++.|+.... +..+|++.|.||||++++
T Consensus 181 ~Ng~~~~~------~p~l~v~~Ge~Vr~~liN~~~~~-HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~ 253 (299)
T 3t9w_A 181 INNRAHHD------APTFEANLGERVEWIAIGHGSNF-HTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQ 253 (299)
T ss_dssp ETTCCTTC------CCEEEEETTCEEEEEEEEESSCC-CEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEE
T ss_pred ecCccccc------cccceecCCCEEEEEEEeccccc-eeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEE
Confidence 56665532 37899999999999999999855 799999999999999987664 346899999999999999
Q ss_pred EEecC--CCceeEEEEeccCCcCCCCCCceeEEEEEeeCC
Q 042677 220 VTADK--NPADYYIVASPKLSHADANSSIYGVAVLHYDNS 257 (504)
Q Consensus 220 v~~~~--~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~ 257 (504)
|.+.+ +||.|.++|+...-. .....+++.+...
T Consensus 254 via~~~dnPG~w~~HCHi~~H~-----~~GM~~~f~V~~~ 288 (299)
T 3t9w_A 254 VIAGEGVGPGMWMYHCHVQNHS-----DMGMAGMFLVRNA 288 (299)
T ss_dssp EETTTTTCSEEEEEEECSHHHH-----HTTCEEEEEEECT
T ss_pred EEEeeCCCCeeEEEEcCCHHHH-----hcCCeEEEEEECC
Confidence 97654 589999999864211 1233456666544
No 29
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=3.9e-41 Score=327.52 Aligned_cols=210 Identities=20% Similarity=0.350 Sum_probs=175.4
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCC------------C
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKD------------Q 67 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~------------~ 67 (504)
++|||+|||++||+|+|+|+|.|++++||||||+++.. ++||++ + ||+|.||++|+|+|+++. +
T Consensus 32 ~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~ 108 (276)
T 3kw8_A 32 SVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGS 108 (276)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCS
T ss_pred cccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-CCcCCCCCCCEEEEEEEcCCccccccCccCCCC
Confidence 58999999999999999999999999999999998864 699999 7 999999999999999843 3
Q ss_pred ceeeeeecchh------hhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeE
Q 042677 68 IGSFFYFPSIN------FQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWM 141 (504)
Q Consensus 68 ~Gt~wYH~H~~------~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (504)
+||||||||.. .|+.+||+|+|||+++... . .|+|+++++++ +
T Consensus 109 ~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~--~---~drE~~l~l~~--------------------------~ 157 (276)
T 3kw8_A 109 AGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV--L---PDATHTIVFND--------------------------M 157 (276)
T ss_dssp CEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC--C---CSEEEEEEEET--------------------------T
T ss_pred CEEEEEecCccccccchhhhhCccEEEEEEecCCCc--c---cccceEEEecc--------------------------c
Confidence 79999999984 6899999999999986532 1 28899988754 3
Q ss_pred EEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCccc----ceeeceEEEcCCcEEE
Q 042677 142 LMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTN----KIKLDSLDVHVGQSYS 217 (504)
Q Consensus 142 liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~v~l~~geR~d 217 (504)
+|||+.+.. .+.+++++|+++||||+|.+.. .+.||||||.|.+++ ||.... +..+|++.|.|||+++
T Consensus 158 ~iNG~~~~~------~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~ 229 (276)
T 3kw8_A 158 TINNRKPHT------GPDFEATVGDRVEIVMITHGEY-YHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFG 229 (276)
T ss_dssp EETTCCTTC------CCCEEEETTCEEEEEEEEESSC-CEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEE
T ss_pred ccceecccC------CCCEEEecCCEEEEEEecCCCc-ceeEEEccceeEEec-cCccCCCcccccCCccEEeCCCceEE
Confidence 899997632 4889999999999999999985 689999999999976 775432 4578999999999999
Q ss_pred EEEEecC--CCceeEEEEeccCCcCCCCCCceeEEEEEeeCC
Q 042677 218 VLVTADK--NPADYYIVASPKLSHADANSSIYGVAVLHYDNS 257 (504)
Q Consensus 218 v~v~~~~--~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~ 257 (504)
+.+++++ ++|.|+++|+...-. .....+.+.+...
T Consensus 230 ~~~~~~~~~npG~w~~HCH~~~H~-----~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 230 FQIIAGEGVGAGAWMYHCHVQSHS-----DMGMVGLFLVKKP 266 (276)
T ss_dssp EEEETTTTTCSEEEEEEECSHHHH-----HTTCEEEEEEECT
T ss_pred EEEEeccCCCCCeEEEECCCchHh-----hCCCeEEEEEeCC
Confidence 9999985 699999999954211 1223455666544
No 30
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=2.1e-40 Score=344.64 Aligned_cols=238 Identities=20% Similarity=0.312 Sum_probs=191.7
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCC--CCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecc--
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMD--EPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPS-- 76 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~--~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H-- 76 (504)
++|||+|++++||+|+|+|+|.++ .+++|||||+.. +||++.+ .+|.||++++|+|++ +++||||||||
T Consensus 56 ~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~~~-~~i~pg~~~~y~f~~-~~~Gt~~yH~H~~ 128 (442)
T 2zoo_A 56 TVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGAES-SFTAPGHTSTFNFKA-LNPGLYIYHCATA 128 (442)
T ss_dssp BSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG-CCBCTTCEEEEEEEC-CSCEEEEEECCCS
T ss_pred cCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCCcc-EEECCCCEEEEEEEc-CCCeEEEEecCCC
Confidence 479999999999999999999985 599999999853 6887643 359999999999996 78999999996
Q ss_pred -hhhhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHH-HHH-HHhccccCCCCCCCeEEEccccCCCCCC
Q 042677 77 -INFQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKE-IRS-KMKKMQWAYFNPPDWMLMNGKVSLMNPN 153 (504)
Q Consensus 77 -~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~-~~~-~~~~~~~~~~~~~~~~liNG~~~~~~~~ 153 (504)
...|+.+||+|+|||+++... +.+|+|++|+++||+++.... ... ..+... .....+++++|||+.+...
T Consensus 129 ~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~-- 201 (442)
T 2zoo_A 129 PVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFGEAGLQPFDMAK-AIDEDADYVVFNGSVGSTT-- 201 (442)
T ss_dssp SHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTTCCEEECBCHHH-HHTTCCSEEEETTSTTTTS--
T ss_pred ChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCcccccccccCChhH-hccCCCCEEEECCCcCCCC--
Confidence 458999999999999975421 134899999999999865310 000 000000 0113568999999986321
Q ss_pred CCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEE
Q 042677 154 TTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233 (504)
Q Consensus 154 ~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~ 233 (504)
..+.+++++|++|||||+|++....+.|+|+||.|+||+.||.+++|..++++.|.||||+||+|+++ .+|+|+++|
T Consensus 202 --~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~ 278 (442)
T 2zoo_A 202 --DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVE-VPGTFILVD 278 (442)
T ss_dssp --GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECC-SCEEEEEEE
T ss_pred --CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcC-CCCeEEEEe
Confidence 12579999999999999999988889999999999999999999999999999999999999999999 589999999
Q ss_pred eccCCcCCCCCCceeEEEEEeeCCCC
Q 042677 234 SPKLSHADANSSIYGVAVLHYDNSTT 259 (504)
Q Consensus 234 ~~~~~~~~~~~~~~~~~il~y~~~~~ 259 (504)
+...... .....++++|.+...
T Consensus 279 ~~~~~~~----~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 279 HSIFRAF----NKGALAMLKVEGPDD 300 (442)
T ss_dssp SSTHHHH----TTSCEEEEEEESCCC
T ss_pred ccccccc----ccCceEEEEecCCCC
Confidence 8653211 235689999987653
No 31
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=1.2e-40 Score=361.51 Aligned_cols=219 Identities=19% Similarity=0.320 Sum_probs=167.5
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCccc---------CCcCCCCCeEEEEEEeCCC----
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGT---------NCPIQPGTNWTYVFQTKDQ---- 67 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~---------~~~i~pg~~~~y~~~~~~~---- 67 (504)
++|||+|||++||+|+|+|+|.|+++++|||||+++. +.+||+|++ ||+|+||++|+|+|+++.+
T Consensus 65 ~~pGP~I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~--~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~ 142 (647)
T 1sdd_B 65 GILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYE--KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPE 142 (647)
T ss_dssp TTSCCCEEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCC
T ss_pred CCcCceEEEeCCCEEEEEEEECCCCceEEecCcceeC--CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCC
Confidence 5899999999999999999999999999999999874 579999863 7999999999999998654
Q ss_pred -ce----eeeeecchh--hhhhCCccccEEEeCCCCcCC--CCCCCCcceeEEee------eeecccHHHHHHHHhcccc
Q 042677 68 -IG----SFFYFPSIN--FQKAGGGFGPIRINNRIAINV--PFPKPEAEFDLLIG------DWYQESYKEIRSKMKKMQW 132 (504)
Q Consensus 68 -~G----t~wYH~H~~--~~~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~------d~~~~~~~~~~~~~~~~~~ 132 (504)
+| |||||||.+ .|+.+||+|+|||+++..... ..+..++|++|+|+ ||+++.............
T Consensus 143 ~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~- 221 (647)
T 1sdd_B 143 NPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSE- 221 (647)
T ss_dssp SSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC--------------
T ss_pred CCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCcc-
Confidence 57 999999995 799999999999998654211 11223689999999 677664432110000000
Q ss_pred CCCCCCCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCe-eEEEEEcCceeeEeecCCCcccceeeceEEEc
Q 042677 133 AYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAW-SFNFRIQNHRMVLVETEGSYTNKIKLDSLDVH 211 (504)
Q Consensus 133 ~~~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~ 211 (504)
....++.++|||+.+. .|.++|++|++|||||+|++... .+.||+|||.|+|++.|| ..+|++.|.
T Consensus 222 -~~~~~~~~~iNG~~~~-------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~ 288 (647)
T 1sdd_B 222 -VKNSHEFHAINGMIYN-------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLL 288 (647)
T ss_dssp ---CCCEEEEETTBSSC-------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEEC
T ss_pred -hhhcCceeccCCEecC-------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEEC
Confidence 1224578999999862 27899999999999999999864 899999999999999886 478999999
Q ss_pred CCcEEEEEEEecCCCceeEEEEecc
Q 042677 212 VGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 212 ~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
||||+||+|+++ ++|.|.++|+..
T Consensus 289 pg~r~~v~~~~~-~pG~w~~hch~~ 312 (647)
T 1sdd_B 289 PGSFKTLEMKAS-KPGWWLLDTEVG 312 (647)
T ss_dssp TTEEEEEEEECC-SSEEEEEECCCH
T ss_pred CCeEEEEEEEec-cceEeecccCcc
Confidence 999999999998 589999999864
No 32
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.8e-41 Score=333.46 Aligned_cols=208 Identities=17% Similarity=0.267 Sum_probs=155.6
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCC----CCCCCCCCCccc---CCcCCCCCeEEEEEEeCCC------
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQ----RLNSWQDGVSGT---NCPIQPGTNWTYVFQTKDQ------ 67 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~----~~~~~~DG~~~~---~~~i~pg~~~~y~~~~~~~------ 67 (504)
++|||+|||++||+|+|+|+|.++++++|||||++. .+.++.||++++ ||+|.||++|+|+|+++.+
T Consensus 56 ~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~ 135 (306)
T 1sdd_A 56 GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHD 135 (306)
T ss_dssp CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSS
T ss_pred CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCC
Confidence 479999999999999999999999999999999984 344444444433 6999999999999998543
Q ss_pred ---ceeeeeecchhh--hhhCCccccEEEeCCCCc---CCCCCCCCcceeEEeeeeecccHHHHHHHHhccccCCCCCCC
Q 042677 68 ---IGSFFYFPSINF--QKAGGGFGPIRINNRIAI---NVPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPD 139 (504)
Q Consensus 68 ---~Gt~wYH~H~~~--~~~~Gl~G~liV~~~~~~---~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (504)
+||||||||... |+.+||+|+|||+++... ..+. ..|+|++++++||... ..+. ...++
T Consensus 136 d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~-~~d~e~~l~~~d~d~~-----------~~~~-~~~~~ 202 (306)
T 1sdd_A 136 DPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQK-MFEKQHVLMFAVFDES-----------KSWN-QTSSL 202 (306)
T ss_dssp SCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBS-SSCCCCCCBCCEEETT-----------SSSS-CCCCE
T ss_pred CCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcC-cccceEEEEEEecccc-----------cccc-cCCCc
Confidence 379999999874 889999999999986421 1111 3478999999998532 1111 12356
Q ss_pred eEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCC-eeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEE
Q 042677 140 WMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTA-WSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSV 218 (504)
Q Consensus 140 ~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv 218 (504)
.++|||+.+.. .|.+++++|++|||||+|++.. ..+.|+++||.|.+ || ..+|++.|.||||+||
T Consensus 203 ~~~ING~~~~~------~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~pger~~v 268 (306)
T 1sdd_A 203 MYTVNGYVNGT------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVSATSTTA 268 (306)
T ss_dssp EECSSSCCSSC------CCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEETTCCBC-
T ss_pred ceeeCCEecCC------CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECCCcEEEE
Confidence 89999998632 3789999999999999999987 57889999999876 77 3589999999999999
Q ss_pred EEEecCCCceeEEEEecc
Q 042677 219 LVTADKNPADYYIVASPK 236 (504)
Q Consensus 219 ~v~~~~~~g~y~i~~~~~ 236 (504)
+|+++ ++|.|+++|+..
T Consensus 269 ~~~~~-~pG~~~~hch~~ 285 (306)
T 1sdd_A 269 NMTVS-PEGRWTIASLIP 285 (306)
T ss_dssp --------CCCCCBCCST
T ss_pred EEEcC-CCeEEEEEeCCh
Confidence 99998 689999999864
No 33
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=2.7e-39 Score=323.73 Aligned_cols=238 Identities=18% Similarity=0.226 Sum_probs=180.7
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchh--
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSIN-- 78 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~-- 78 (504)
++|||+|++++||+|+|+|+|. .+++||||+++.+....||.+.+ ..|.||++++|+|++ +++||||||||..
T Consensus 60 ~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~-~~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~ 134 (333)
T 1mzy_A 60 SIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGL-TLINPGEKVVLRFKA-TRAGAFVYHCAPGGP 134 (333)
T ss_dssp BSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGG-CCBCTTEEEEEEEEC-CSCEEEEEECCCSTT
T ss_pred ccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCce-eEeCCCCEEEEEEEC-CCCEEEEEeecCCcc
Confidence 5899999999999999999999 57899999987654445554444 249999999999997 6899999999986
Q ss_pred ---hhhhCCccccEEEeCCCCcC----CCCCCCCcceeEEeeeeeccc--HHHH----------HHHHhccccCCCCCCC
Q 042677 79 ---FQKAGGGFGPIRINNRIAIN----VPFPKPEAEFDLLIGDWYQES--YKEI----------RSKMKKMQWAYFNPPD 139 (504)
Q Consensus 79 ---~~~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~~--~~~~----------~~~~~~~~~~~~~~~~ 139 (504)
.|+.+||+|+|||+++...+ .+. .+|+|++|+++||++.. ...+ ...+... ....++
T Consensus 135 ~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~ 210 (333)
T 1mzy_A 135 MIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVM---DTLIPS 210 (333)
T ss_dssp HHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHH---TTTCCS
T ss_pred cchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeeeccCccccccccccccccccccchhHHh---hccCCc
Confidence 69999999999999754321 122 34889999999999832 1100 0000100 123568
Q ss_pred eEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccc-e-eeceEEEcCCcEEE
Q 042677 140 WMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNK-I-KLDSLDVHVGQSYS 217 (504)
Q Consensus 140 ~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p-~-~~d~v~l~~geR~d 217 (504)
.++|||+..... ..+.++|++|++||||++|++....+ ..+++|.++|++ ||.++++ . .+|++.|.||||+|
T Consensus 211 ~~~ING~~~~~~----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~ 284 (333)
T 1mzy_A 211 HIVFNGAVGALT----GEGALKAKVGDNVLFVHSQPNRDSRP-HLIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGA 284 (333)
T ss_dssp EEEETTSTTTTS----GGGCEEEETTCEEEEEEEESSSCBCE-EEETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEE
T ss_pred EEEECCcccccC----CCcceEecCCCEEEEEECCCCCcccc-EEECCCCeEEEe-CCcccCCCccCcceEEECCCceEE
Confidence 999999985211 12679999999998888776654433 348999999999 9999874 3 48999999999999
Q ss_pred EEEEecCCCceeEEEEeccCCcCCCCCCceeEEEEEeeCCC
Q 042677 218 VLVTADKNPADYYIVASPKLSHADANSSIYGVAVLHYDNST 258 (504)
Q Consensus 218 v~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 258 (504)
|+|+++ .+|+|+++|+...... .....++++|.+..
T Consensus 285 v~v~a~-~pG~y~~~ch~~~h~~----~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 285 ALYKFL-QPGVYAYVNHNLIEAV----HKGATAHVLVEGEW 320 (333)
T ss_dssp EEEECC-SCEEEEEEESSHHHHH----TTCCEEEEEEESCC
T ss_pred EEEEcC-CCEEEEEecChhhhHh----hCCCEEEEEEcCCC
Confidence 999999 4899999999753221 23466899998754
No 34
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=5.8e-39 Score=321.79 Aligned_cols=241 Identities=17% Similarity=0.222 Sum_probs=177.7
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchh--
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSIN-- 78 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~-- 78 (504)
++|||+|+|++||+|+|+|+|.++ ++||||+++.+..+.||.+.+ ..|.||++++|+|++ +++||||||||..
T Consensus 61 ~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~-~~i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~ 135 (336)
T 1oe1_A 61 SMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL-TNVNPGEQATLRFKA-DRSGTFVYHCAPEGM 135 (336)
T ss_dssp BSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTC
T ss_pred ccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce-EEeCCCCEEEEEEEC-CCCeEEEEecCCCCc
Confidence 589999999999999999999973 456666666555556666555 239999999999997 6899999999974
Q ss_pred --hhhhCCccccEEEeCCCCcC----CCCCCCCcceeEEeeeeecccHH--HHHHHHhcc-------ccCCCCCCCeEEE
Q 042677 79 --FQKAGGGFGPIRINNRIAIN----VPFPKPEAEFDLLIGDWYQESYK--EIRSKMKKM-------QWAYFNPPDWMLM 143 (504)
Q Consensus 79 --~~~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~li 143 (504)
.|+.+||+|+|||+++.... .+. .+|+|++|+++||++..+. .+..+...+ .......++.++|
T Consensus 136 ~~~~~~~Gl~G~liV~~~~~~~~~~~~~~-~~D~e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~li 214 (336)
T 1oe1_A 136 VPWHVVSGMSGTLMVLPRDGLKDPQGKPL-HYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVF 214 (336)
T ss_dssp HHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEE
T ss_pred hhHHHhCCCeEEEEEecCcCCcccccCcc-cCCceeEeeeeeeeeccccCCceeecccccccccchhhHhhcCCCCEEEE
Confidence 69999999999999765321 122 4588999999999984211 110000000 0001235689999
Q ss_pred ccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEE-EEEcCceeeEeecCCCcccce--eeceEEEcCCcEEEEEE
Q 042677 144 NGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFN-FRIQNHRMVLVETEGSYTNKI--KLDSLDVHVGQSYSVLV 220 (504)
Q Consensus 144 NG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~-~~i~gh~~~via~DG~~~~p~--~~d~v~l~~geR~dv~v 220 (504)
||+.+..+. .+.++|++|++||| +|++..+.+. +.|++|.++|++ ||.+++|. .++++.|.+|||+||+|
T Consensus 215 NG~~~~~~~----~~~l~v~~GervRl--in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv 287 (336)
T 1oe1_A 215 NGKVGALTG----ANALTAKVGETVLL--IHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALY 287 (336)
T ss_dssp TTSTTTTSG----GGCEEEETTCEEEE--EEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEE
T ss_pred CCeeccCCC----CcceEcCCCCEEEE--EecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEE
Confidence 999874321 27899999997776 5555544333 457999999998 99999764 36899999999999999
Q ss_pred EecCCCceeEEEEeccCCcCCCCCCceeEEEEEeeCCCC
Q 042677 221 TADKNPADYYIVASPKLSHADANSSIYGVAVLHYDNSTT 259 (504)
Q Consensus 221 ~~~~~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~ 259 (504)
++++ +|+|+++|+...... .....++++|.+...
T Consensus 288 ~~~~-pG~y~~~~h~~~~~~----~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 288 TFKQ-PGVYAYLNHNLIEAF----ELGAAGHIKVEGKWN 321 (336)
T ss_dssp ECCS-CEEEEEEESSHHHHH----TTSCEEEEEEESCCC
T ss_pred EcCC-CceEEEEechhhccc----cCCCeEEEEECCCCC
Confidence 9995 899999998653221 234678999987653
No 35
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=4.2e-39 Score=323.36 Aligned_cols=239 Identities=17% Similarity=0.221 Sum_probs=178.6
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchh--
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSIN-- 78 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~-- 78 (504)
++|||+|+|++||+|+|+|+|.+ +++||||+++.+....||...+ ..|.||++++|+|++ +++||||||||..
T Consensus 67 ~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~~-~~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~ 141 (340)
T 2bw4_A 67 SVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGAL-TQVNPGEETTLRFKA-TKPGVFVYHCAPEGM 141 (340)
T ss_dssp BSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGGG-CCBCTTEEEEEEEEC-CSCEEEEEECCCTTC
T ss_pred CCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCccc-eEeCCCCEEEEEEEC-CCCeEEEEEcCCCCc
Confidence 48999999999999999999998 6799999987654434443333 349999999999997 6799999999975
Q ss_pred --hhhhCCccccEEEeCCCCcC----CCCCCCCcceeEEeeeeecc--cHHHH----------HHHHhccccCCCCCCCe
Q 042677 79 --FQKAGGGFGPIRINNRIAIN----VPFPKPEAEFDLLIGDWYQE--SYKEI----------RSKMKKMQWAYFNPPDW 140 (504)
Q Consensus 79 --~~~~~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~l~d~~~~--~~~~~----------~~~~~~~~~~~~~~~~~ 140 (504)
.|+.+||+|+|||+++.... .+. .+|+|++++++||++. ....+ ....+.. ....++.
T Consensus 142 ~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~ 217 (340)
T 2bw4_A 142 VPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAM---RTLTPTH 217 (340)
T ss_dssp HHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHHH---HTTCCSE
T ss_pred hhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeeccccCCcccccccccccccchhhHh---hcCCCCE
Confidence 69999999999999865311 121 3488999999999973 11110 0000000 1234689
Q ss_pred EEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccc-e-eeceEEEcCCcEEEE
Q 042677 141 MLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNK-I-KLDSLDVHVGQSYSV 218 (504)
Q Consensus 141 ~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p-~-~~d~v~l~~geR~dv 218 (504)
++|||+.+... ..+.++|++|++|||+++|++.... ..++++|.|+|++ ||.++.+ . .+|+|.|.+|||+||
T Consensus 218 ~~iNG~~~~~~----~~~~l~v~~G~r~Rl~n~~~~~~~~-~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v 291 (340)
T 2bw4_A 218 IVFNGAVGALT----GDHALTAAVGERVLVVHSQANRDTR-PHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAA 291 (340)
T ss_dssp EEETTSTTTTS----GGGCEEEETTCEEEEEEEESSSCBC-EEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEE
T ss_pred EEECCccCCcc----CCCceEcCCCCEEEEEECCCCCccc-eEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEE
Confidence 99999986321 1378999999988877777655442 4458999999997 9998864 3 489999999999999
Q ss_pred EEEecCCCceeEEEEeccCCcCCCCCCceeEEEEEeeCCCC
Q 042677 219 LVTADKNPADYYIVASPKLSHADANSSIYGVAVLHYDNSTT 259 (504)
Q Consensus 219 ~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~ 259 (504)
+|++++ +|+|+++|+...... .....++++|.+...
T Consensus 292 ~v~~~~-pG~y~~~~h~~~~h~----~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 292 FYTFRQ-PGVYAYVNHNLIEAF----ELGAAGHFKVTGEWN 327 (340)
T ss_dssp EEECCS-CEEEEEEESSHHHHH----TTSCEEEEEEESCCC
T ss_pred EEECCC-CeeeEEEcCchHHHH----hCCCEEEEEECCCCc
Confidence 999995 899999998652121 123568899987543
No 36
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=1.2e-39 Score=355.74 Aligned_cols=221 Identities=15% Similarity=0.229 Sum_probs=176.5
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCC---------Cceee
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKD---------QIGSF 71 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~---------~~Gt~ 71 (504)
++|||+|||++||+|+|+|+|.++++++|||||+++...+. ||+++.||+|+||++|+|+|++++ ++|||
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~ 273 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAW 273 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEE
T ss_pred CCCCCeEEEEcCCEEEEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeE
Confidence 47999999999999999999999999999999999887653 699877999999999999999864 89999
Q ss_pred eeecchhh--hhhCCccccEEEeCCCCcCC--CCCCCCcceeEEeee------eecccHHHHHHHHh-ccc--cC--C-C
Q 042677 72 FYFPSINF--QKAGGGFGPIRINNRIAINV--PFPKPEAEFDLLIGD------WYQESYKEIRSKMK-KMQ--WA--Y-F 135 (504)
Q Consensus 72 wYH~H~~~--~~~~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~l~d------~~~~~~~~~~~~~~-~~~--~~--~-~ 135 (504)
|||||.+. |+++||+|+|||+++..... .....++|++|++++ |+++... ..+.. ... .. . .
T Consensus 274 wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~--~~~~~~p~~~~~~d~~~~ 351 (770)
T 2r7e_B 274 AYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENM--ERNCRAPCNIQMEDPTFK 351 (770)
T ss_dssp EECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGG--SSCSCCSSCCCSSSSSST
T ss_pred EeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccch--hhcccCccccccCCcccc
Confidence 99999974 89999999999998654221 112347899888754 4443221 00000 000 00 0 0
Q ss_pred CCCCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCe-eEEEEEcCceeeEeecCCCcccceeeceEEEcCCc
Q 042677 136 NPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAW-SFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQ 214 (504)
Q Consensus 136 ~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~ge 214 (504)
...+.++|||+... ..+.+++++|++|||||+|++... .|.||||||.|+|++.||. .+|+|.|.|||
T Consensus 352 ~~~~~~~ING~~~~------~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~ 420 (770)
T 2r7e_B 352 ENYRFHAINGYIMD------TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGV 420 (770)
T ss_dssp TTSCEECTTSCTTT------TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTC
T ss_pred ccCCccccCCccCC------CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCe
Confidence 12356899999762 136799999999999999999753 7899999999999999974 78999999999
Q ss_pred EEEEEEEecCCCceeEEEEecc
Q 042677 215 SYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 215 R~dv~v~~~~~~g~y~i~~~~~ 236 (504)
|++|+|+++ ++|.|.++|+..
T Consensus 421 ~~~v~~~ad-~pG~w~~hcH~~ 441 (770)
T 2r7e_B 421 FETVEMLPS-KAGIWRVECLIG 441 (770)
T ss_dssp CCEEEECCS-SCBCCCBCCCSH
T ss_pred EEEEEEEeC-CCCceEEEeccc
Confidence 999999998 689999999854
No 37
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=2.8e-36 Score=314.29 Aligned_cols=230 Identities=18% Similarity=0.286 Sum_probs=186.2
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCC--CCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchh
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMD--EPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSIN 78 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~--~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~ 78 (504)
++|||+|++++||+|+|+|+|.+. ..++|||||+. .+||++.+ ..|.||++++|.|++ +++||||||||..
T Consensus 191 ~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~-~~i~pG~~~~~~~~~-~~~G~~~yh~h~~ 263 (447)
T 2dv6_A 191 KVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAF-TQTDPGEETVVTFKA-LIPGIYVYHCATP 263 (447)
T ss_dssp BBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGG-CCBCTTCEEEEEEEC-CSCEEEEEECCSS
T ss_pred ccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCcc-EEeCCCCEEEEEEEC-CCCeEEEEEeCCC
Confidence 369999999999999999999984 67999999984 37998754 239999999999997 6899999999964
Q ss_pred ---hhhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHH--------HHHHHhccccCCCCCCCeEEEcccc
Q 042677 79 ---FQKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKE--------IRSKMKKMQWAYFNPPDWMLMNGKV 147 (504)
Q Consensus 79 ---~~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~--------~~~~~~~~~~~~~~~~~~~liNG~~ 147 (504)
.|+.+||+|+|+|+++... +..|+|++++++||++..... ..... ...++.++|||+.
T Consensus 264 ~~~~~~~~Gl~g~l~v~~~~~~----P~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~~iNG~~ 332 (447)
T 2dv6_A 264 SVPTHITNGMYGLLLVEPEGGL----PQVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLI-------NEKPEYFLFNGSV 332 (447)
T ss_dssp SHHHHHHTTCEEEEEEECTTCS----CCCSEEEEEEEEEECBSSCTTCCEECCBBHHHHH-------TTCCSEEEETTST
T ss_pred ChHHHHhCCCEEEEEEeCCCCC----CCCCeeEEEEecccccCCcccccccccCChHHhh-------ccCCCEEEECCcc
Confidence 7899999999999975421 234889999999998753200 00000 1235789999998
Q ss_pred CCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccce--eeceEEEcCCcEEEEEEEecCC
Q 042677 148 SLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKI--KLDSLDVHVGQSYSVLVTADKN 225 (504)
Q Consensus 148 ~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~--~~d~v~l~~geR~dv~v~~~~~ 225 (504)
+..+. .+.+++++|++|||||+|++....|.|||+||.|+||+.||.+++|. ..|++.|.+|||++|+|+++ +
T Consensus 333 ~~~~~----~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~-~ 407 (447)
T 2dv6_A 333 GSLTR----SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKID-R 407 (447)
T ss_dssp TCCCC----CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECC-S
T ss_pred cCCCC----CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECC-C
Confidence 74321 14799999999999999999878899999999999999999998755 48999999999999999998 5
Q ss_pred CceeEEEEeccCCcCCCCCCceeEEEEEeeCCC
Q 042677 226 PADYYIVASPKLSHADANSSIYGVAVLHYDNST 258 (504)
Q Consensus 226 ~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~ 258 (504)
+|.|+|+|+..... .....++++|.+..
T Consensus 408 pG~~~~hch~~~h~-----~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 408 AGRYILVDHALSRL-----EHGLVGFLNVDGPK 435 (447)
T ss_dssp CEEEEEEESSGGGG-----GGTCCEEEEECSCS
T ss_pred CEEEEEEecCcCcc-----ccCCEEEEEEeCCC
Confidence 89999999865331 23447899997754
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.3e-37 Score=339.22 Aligned_cols=217 Identities=18% Similarity=0.208 Sum_probs=168.1
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCC-----CCccc-CCcCCCCCeEEEEEEeCCCce-----
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQD-----GVSGT-NCPIQPGTNWTYVFQTKDQIG----- 69 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~D-----G~~~~-~~~i~pg~~~~y~~~~~~~~G----- 69 (504)
.+|||+||+++||+|+|+|+|.+++++||||||+++. .+++| |++++ ||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 3799999999999999999999999999999999874 45666 45667 999999999999999876554
Q ss_pred ----eeeeecchh--hhhhCCccccEEEeCCCCcC-CC-CCCCCcceeEEeee------eecccHHHHHHHHh-ccccC-
Q 042677 70 ----SFFYFPSIN--FQKAGGGFGPIRINNRIAIN-VP-FPKPEAEFDLLIGD------WYQESYKEIRSKMK-KMQWA- 133 (504)
Q Consensus 70 ----t~wYH~H~~--~~~~~Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~l~d------~~~~~~~~~~~~~~-~~~~~- 133 (504)
|||||||.+ .|+++||+|+|||+++.... .. ....|+|++|++++ |+++.. +..+.. .....
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~--~~~~~~~p~~v~~ 604 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTEN--IQRFLPNPAGVQL 604 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHH--HHHHSSSSSCSCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccc--hhhcccCchhccc
Confidence 999999987 46899999999999864211 11 11458899999965 444321 111110 00000
Q ss_pred C----CCCCCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCC-eeEEEEEcCceeeEeecCCCcccceeeceE
Q 042677 134 Y----FNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTA-WSFNFRIQNHRMVLVETEGSYTNKIKLDSL 208 (504)
Q Consensus 134 ~----~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v 208 (504)
. ......++|||+.+.. ..+.+++|++|||||+|++.. ..|.|||+||.|+|+ +..+|+|
T Consensus 605 ~~~~~~~~~~~~~ING~~~~~-------~~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv 669 (742)
T 2r7e_A 605 EDPEFQASNIMHSINGYVFDS-------LQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTL 669 (742)
T ss_dssp CCHHHHGGGCCBCTTTTCSSC-------CCCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSS
T ss_pred ccccccccCceeeecCcCCCC-------CcEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEE
Confidence 0 0001247899997632 238999999999999998764 468999999999986 5688999
Q ss_pred EEcCCcEEEEEEEecCCCceeEEEEecc
Q 042677 209 DVHVGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 209 ~l~~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
.|.||||++|+|+++ ++|.|+++|+..
T Consensus 670 ~l~Pg~~~~v~~~ad-~pG~w~~hcH~~ 696 (742)
T 2r7e_A 670 TLFPFSGETVFMSME-NPGLWILGCHNS 696 (742)
T ss_dssp CCCCCSSEECCEECC-CCCCSCCEECCC
T ss_pred EECCCcEEEEEEEcC-CCeEEEEEeCCc
Confidence 999999999999998 689999999965
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=1.1e-29 Score=248.25 Aligned_cols=232 Identities=16% Similarity=0.152 Sum_probs=164.7
Q ss_pred CeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEE
Q 042677 139 DWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSV 218 (504)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv 218 (504)
..|++||+.. .|.|++++|+++++|+.|..... +.+|+||.. ..+.||.+. .....|.||++++.
T Consensus 55 ~~~~~ng~~p--------gP~i~~~~Gd~v~v~~~N~~~~~-~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y 119 (288)
T 3gdc_A 55 KGWSYNGRIP--------GPTLWAREGDALRIHFTNAGAHP-HTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTY 119 (288)
T ss_dssp EEEEETTBSS--------CCEEEEETTCEEEEEEEECSSSC-BCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEE
T ss_pred EEEEECCccC--------CCcEEEeCCCEEEEEEEeCCCCc-ccEEecccc--ccccCCCCC----ccceeECCCCEEEE
Confidence 4899999975 38999999999999999998765 688999875 568899864 23456899999999
Q ss_pred EEEecCCCceeEEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccC
Q 042677 219 LVTADKNPADYYIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRN 298 (504)
Q Consensus 219 ~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~ 298 (504)
.++++ .+|.||++|+........ .....+.+.+..... .+ + .+.. +.+.+.
T Consensus 120 ~f~~~-~~Gt~~yH~H~~~~~~~~--~~Gl~G~liV~~~~~-----~~--~--~d~e--------~~l~~~--------- 170 (288)
T 3gdc_A 120 EFDAT-PFGTHLYHCHQSPLAPHI--AKGLYGGFIVEPKEG-----RP--P--ADDE--------MVMVMN--------- 170 (288)
T ss_dssp EEECC-SCEEEEEECCCSSHHHHH--HTTCEEEEEEECSSC-----CC--C--CSEE--------EEEEEE---------
T ss_pred EEEcC-CCccEEEEecCcchHHHH--hCcCeEEEEEeCCcc-----CC--C--Ccce--------EEEEEe---------
Confidence 99996 799999999864210000 112233333333211 00 0 0000 000000
Q ss_pred CccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEE
Q 042677 299 ILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVA 378 (504)
Q Consensus 299 p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (504)
.+. .. .......|+|||+.|... ...+
T Consensus 171 ------------d~~---~~----~g~~~~~~~iNG~~~~~~----------------------------------~~~l 197 (288)
T 3gdc_A 171 ------------GYN---TD----GGDDNEFYSVNGLPFHFM----------------------------------DFPV 197 (288)
T ss_dssp ------------EEC---CS----STTCCSEEEETTSTTHHH----------------------------------HSCE
T ss_pred ------------eEe---cC----CCCCcceEEECccccccc----------------------------------Cccc
Confidence 000 00 001134689999876310 0115
Q ss_pred eeeCCcEEEEEEEeCCC--CcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 379 TGIHRGWIEIVLKNELE--VIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 379 ~~~~g~~v~ivi~N~~~--~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.++.|++|+|.|.|.+. +.||||||||.|+|++.+.. +..|.++||+.|+||+.+.|+|++++||.|
T Consensus 198 ~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~-----------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~ 266 (288)
T 3gdc_A 198 KVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTM-----------LTPSEYTDTISQVQGQRGILELRFPYPGKF 266 (288)
T ss_dssp EEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCC-----------SSCSEEESEEEEETTCEEEEEECCCSCEEE
T ss_pred ccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCc-----------cCCCceeeEEEeCCCceEEEEEECCCCEEE
Confidence 68899999999999985 46999999999999875421 233579999999999999999999999999
Q ss_pred eeeeccchhhhhccEEEEEEec
Q 042677 457 NLRSQLLKNWHLGQELYVRVYD 478 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V~~ 478 (504)
+||||++.|++.|||..++|.+
T Consensus 267 ~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 267 MFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEECSSHHHHTTTCEEEEEEEC
T ss_pred EEEecChHHHhcCCCEEEEEeC
Confidence 9999999999999999999963
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=7.6e-29 Score=248.01 Aligned_cols=247 Identities=16% Similarity=0.119 Sum_probs=165.1
Q ss_pred CeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeec---CCCcccceeeceEEEcCCcE
Q 042677 139 DWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVET---EGSYTNKIKLDSLDVHVGQS 215 (504)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~---DG~~~~p~~~d~v~l~~geR 215 (504)
..+++||+.. .|.|++++|+++|+||+|..... .+||.|.+.+.+. ||.+. +....|.||||
T Consensus 24 ~~~~~NG~~p--------GP~I~v~~Gd~v~v~v~N~l~~~---~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~ 88 (339)
T 2zwn_A 24 KVFGFNGQVP--------GPLIHVQEGDDVIVNVTNNTSLP---HTIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDS 88 (339)
T ss_dssp EEEEETTBSS--------CCEEEEETTCEEEEEEEEESSSC---BCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCE
T ss_pred EEEEECCccC--------CCeEEEECCCEEEEEEEECCCCC---ccEEeCCCCcCCCcccCCCCc----cccCccCCCCe
Confidence 4799999964 29999999999999999998754 3666666777774 99853 23456999999
Q ss_pred EEEEEEecCCCceeEEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCC
Q 042677 216 YSVLVTADKNPADYYIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRN 295 (504)
Q Consensus 216 ~dv~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p 295 (504)
+++.++++ .+|+||++++.....+.......+.-|+ ..... ..++... +.+..+ .+.+ +.... ...+
T Consensus 89 ~~y~f~~~-~~Gt~wyH~H~~~~~q~~~~Gl~G~liV--~p~~~---~~~~~~~---d~e~~l-~l~d--~~~~~-~~~~ 155 (339)
T 2zwn_A 89 YTYKFKAD-RIGTLWYHCHVNVNEHVGVRGMWGPLIV--DPKQP---LPIEKRV---TKDVIM-MMST--WESAV-ADKY 155 (339)
T ss_dssp EEEEEECC-SCEEEEEECCSSHHHHTTTSCCEEEEEE--ECSSC---CTTGGGC---SEEEEE-EEEE--ECGGG-TTCT
T ss_pred EEEEEECC-CCEEEEEEecCCchhhhhcCCceEeEEe--cCCCc---ccccccC---CceEEE-Eeeh--eeccc-cccc
Confidence 99999997 6999999998532111000122222232 22211 0111100 100000 0000 00000 0000
Q ss_pred ccCCccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccce
Q 042677 296 TRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGV 375 (504)
Q Consensus 296 ~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (504)
...+ . .......|.|||+.|.. .
T Consensus 156 --~~~g---------------~-----~~~~~~~~~ING~~~~~-----------------------------------~ 178 (339)
T 2zwn_A 156 --GEGG---------------T-----PMNVADYFSVNAKSFPL-----------------------------------T 178 (339)
T ss_dssp --TCCC---------------S-----TTSCCCEEEETTBCTTS-----------------------------------S
T ss_pred --CCCC---------------C-----CccccceEEEccccCCC-----------------------------------c
Confidence 0000 0 00113468899976421 1
Q ss_pred EEEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCcee
Q 042677 376 FVATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGM 455 (504)
Q Consensus 376 ~~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~ 455 (504)
..+.++.|++++|+|.|.+...||||||||.|+||+.... .+.+|.++||+.|+||+.+.|+|++||||.
T Consensus 179 ~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~DG~----------~~~~p~~~dtv~l~pg~r~~v~~~~~~pG~ 248 (339)
T 2zwn_A 179 QPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTHKDGL----------PLDSPYYADTVLVSPGERYDVIIEADNPGR 248 (339)
T ss_dssp CCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEEETTE----------EEEEEEEESEEEECTTCEEEEEEECCSCSE
T ss_pred ccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEEeCCe----------ecCCCcEEEEEEECCCCEEEEEEEeCCCee
Confidence 1267889999999999999889999999999999998432 122367899999999999999999999999
Q ss_pred eeeeeccchh------hhhccEEEEEEecCC
Q 042677 456 WNLRSQLLKN------WHLGQELYVRVYDAD 480 (504)
Q Consensus 456 w~~HCHil~H------~~~Gm~~~~~V~~~~ 480 (504)
|+||||++.| +..||+..++|....
T Consensus 249 w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 249 FIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 9999999999 789999999986543
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=1.4e-28 Score=243.41 Aligned_cols=249 Identities=14% Similarity=0.076 Sum_probs=167.4
Q ss_pred CeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceee-EeecCCCcccceeeceEEEcCCcEEE
Q 042677 139 DWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMV-LVETEGSYTNKIKLDSLDVHVGQSYS 217 (504)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~-via~DG~~~~p~~~d~v~l~~geR~d 217 (504)
..+++||+.. .|.|++++|+++++|+.|..... +.+|+||.... ..+.||.+. +....|.||++++
T Consensus 23 ~~~~~ng~~p--------GP~i~~~~Gd~v~v~~~N~l~~~-~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~ 89 (318)
T 3g5w_A 23 HTFAFNGQVP--------APLIHVMEGDDVTVNVTNMTTLP-HTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFT 89 (318)
T ss_dssp EEEEETTBSS--------CCEEEEETTCEEEEEEEECSSSC-BCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEE
T ss_pred EEEEECCccC--------CceEEEeCCCEEEEEEEeCCCCc-eeEEecCcCCCCCcccCCCcc----cccccCCCCCEEE
Confidence 4799999865 39999999999999999998754 68888887654 347899753 2235689999999
Q ss_pred EEEEecCCCceeEEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCcc
Q 042677 218 VLVTADKNPADYYIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTR 297 (504)
Q Consensus 218 v~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~ 297 (504)
..++++ .+|+||++++........ .....+.|.+..... .+.+.. .+.+..+ .+.+ +..... ..
T Consensus 90 y~f~~~-~~Gt~wYH~H~~~~~~~~--~~Gl~G~lIV~~~~~---~~~~~~---~d~e~~l-~l~d--w~~~~~--~~-- 153 (318)
T 3g5w_A 90 YKFKAE-PAGTMWYHCHVNVNEHVT--MRGMWGPLIVEPKNP---LPIEKT---VTKDYIL-MLSD--WVSSWA--NK-- 153 (318)
T ss_dssp EEEECC-SCEEEEEECCSSHHHHHH--HSCCEEEEEEECSSC---CHHHHT---CCEEEEE-EEEE--ECGGGT--TC--
T ss_pred EEEEcC-CCEEEEEEccCChhhhhc--cCCCEEEEEEcCCCc---cccccc---ccceeEE-EEEe--eccccc--cc--
Confidence 999997 699999999863110000 011223333333211 000000 0100000 0000 000000 00
Q ss_pred CCccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEE
Q 042677 298 NILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFV 377 (504)
Q Consensus 298 ~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (504)
.. ... ...+....|.|||+.|.. ...
T Consensus 154 -~~----------------~~~--~~~~~~d~~~ING~~~~~-----------------------------------~~~ 179 (318)
T 3g5w_A 154 -PG----------------EGG--IPGDVFDYYTINAKSFPE-----------------------------------TQP 179 (318)
T ss_dssp -TT----------------CCC--CTTCCCCEEEETTBCBTS-----------------------------------SCC
T ss_pred -cc----------------cCC--CCCCcCcEEEEcCcCCCC-----------------------------------Ccc
Confidence 00 000 000112468999987621 112
Q ss_pred EeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceeee
Q 042677 378 ATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWN 457 (504)
Q Consensus 378 ~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~ 457 (504)
+.++.|++|+|+|.|.+...||||||||.|+|+++..+. +.+|.+|||+.|+||+.+.|+|+|+|||.|+
T Consensus 180 l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~~dG~~----------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~ 249 (318)
T 3g5w_A 180 IRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFP----------LDKPIKGDTVLIGPGERYDVILNMDNPGLWM 249 (318)
T ss_dssp EEECTTCEEEEEEEECSSSCEEEEETTSCEEEEEETTEE----------EEEEEEESEEEECTTCEEEEEEECCSCSEEE
T ss_pred EEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEecCCcc----------cCCCccccEEEECCCCEEEEEEECCCCeeEE
Confidence 678899999999999998899999999999999984321 2246789999999999999999999999999
Q ss_pred eeeccchhhh------hccEEEEEEecCC
Q 042677 458 LRSQLLKNWH------LGQELYVRVYDAD 480 (504)
Q Consensus 458 ~HCHil~H~~------~Gm~~~~~V~~~~ 480 (504)
||||++.|++ .|||..++|...+
T Consensus 250 ~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 250 IHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999998 5889999987655
No 42
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=5.5e-27 Score=227.74 Aligned_cols=226 Identities=14% Similarity=0.057 Sum_probs=160.6
Q ss_pred EEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEE
Q 042677 141 MLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLV 220 (504)
Q Consensus 141 ~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v 220 (504)
+..||+.. .|.|++++|+++++++.|.... ...+|.||..+.. +.||.++ ..-.|.||+++...+
T Consensus 27 ~~~ng~~p--------GP~i~~~~Gd~v~v~~~N~~~~-~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f 91 (276)
T 3kw8_A 27 EKGKASVP--------GPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTW 91 (276)
T ss_dssp STTCCBSS--------CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEE
T ss_pred eccCCccc--------CCeEEEECCCEEEEEEEECCCC-CccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEE
Confidence 34677755 3999999999999999999764 4688888887654 6899762 234589999999999
Q ss_pred EecCC------------CceeEEEEeccCCcC-CCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 042677 221 TADKN------------PADYYIVASPKLSHA-DANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGC 287 (504)
Q Consensus 221 ~~~~~------------~g~y~i~~~~~~~~~-~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~ 287 (504)
+++++ .|.||++++...... .........+.|.+..... +
T Consensus 92 ~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~---------~------------------ 144 (276)
T 3kw8_A 92 RTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD---------V------------------ 144 (276)
T ss_dssp ECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------C------------------
T ss_pred EcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCC---------c------------------
Confidence 99752 578999998642110 0000112223333332110 0
Q ss_pred ccccCCCCccCCccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCC
Q 042677 288 FVNSYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNAS 367 (504)
Q Consensus 288 l~~~~~~p~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~ 367 (504)
. +. .+..+. +. .|+|||+.|..
T Consensus 145 ------~----~d-------rE~~l~---l~----------~~~iNG~~~~~---------------------------- 166 (276)
T 3kw8_A 145 ------L----PD-------ATHTIV---FN----------DMTINNRKPHT---------------------------- 166 (276)
T ss_dssp ------C----CS-------EEEEEE---EE----------TTEETTCCTTC----------------------------
T ss_pred ------c----cc-------cceEEE---ec----------ccccceecccC----------------------------
Confidence 0 00 011112 21 26899987631
Q ss_pred CCCcccceEEEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEE
Q 042677 368 NVDAIRGVFVATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVY 447 (504)
Q Consensus 368 ~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~ir 447 (504)
...+.++.|++|+|+|.|.+.+.||||||||.|+|++. |.++. ....+.+|||+.|+|++.+.++
T Consensus 167 -------~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~--G~~~~------p~~~~~~~Dtv~v~pg~~~~~~ 231 (276)
T 3kw8_A 167 -------GPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRT--GILTG------PDDPSRVIDNKITGPADSFGFQ 231 (276)
T ss_dssp -------CCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSS--SSCCS------TTCCCCEESEEEECTTCEEEEE
T ss_pred -------CCCEEEecCCEEEEEEecCCCcceeEEEccceeEEecc--CccCC------CcccccCCccEEeCCCceEEEE
Confidence 11267899999999999999899999999999999764 33321 1122469999999999999999
Q ss_pred EEec---CceeeeeeeccchhhhhccEEEEEEecCCC
Q 042677 448 AYLD---NPGMWNLRSQLLKNWHLGQELYVRVYDADP 481 (504)
Q Consensus 448 f~ad---npG~w~~HCHil~H~~~Gm~~~~~V~~~~~ 481 (504)
|+++ |||.|+||||+++|++.|||..|+|.++++
T Consensus 232 ~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 232 IIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 9997 899999999999999999999999998764
No 43
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=6.6e-27 Score=229.41 Aligned_cols=218 Identities=13% Similarity=0.099 Sum_probs=151.0
Q ss_pred cceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecC------------
Q 042677 157 HESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADK------------ 224 (504)
Q Consensus 157 ~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~------------ 224 (504)
.|.|++++|++++++|.|..... ..+|.||..+. -+.||.++. .-.|.|||.+...++++.
T Consensus 57 GP~i~~~~GD~v~v~~~N~l~~~-~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTTDRV-LSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECCCCC-ccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 49999999999999999998755 58888887654 367997542 123789999999888752
Q ss_pred CCceeEEEEeccCCcCCC-CCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCCccce
Q 042677 225 NPADYYIVASPKLSHADA-NSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYF 303 (504)
Q Consensus 225 ~~g~y~i~~~~~~~~~~~-~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~ 303 (504)
..|.||++++........ .......+.|....... + . |
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~---------~------------------------~----~---- 168 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD---------L------------------------L----P---- 168 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------C------------------------C----C----
T ss_pred CceeEEEecCCcccccchhhhcccccceEEEecccc---------c------------------------C----c----
Confidence 468999999753221100 00011223332222110 0 0 1
Q ss_pred eeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCC
Q 042677 304 SEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHR 383 (504)
Q Consensus 304 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 383 (504)
++.+. +.. ..|.+|+..+. ....+.++.|
T Consensus 169 -----d~e~~---l~~--------~~~~~Ng~~~~-----------------------------------~~p~l~v~~G 197 (299)
T 3t9w_A 169 -----KRQFT---VVF--------NDMMINNRAHH-----------------------------------DAPTFEANLG 197 (299)
T ss_dssp -----SEEEE---EEE--------ETTEETTCCTT-----------------------------------CCCEEEEETT
T ss_pred -----cccce---eee--------eeeeecCcccc-----------------------------------ccccceecCC
Confidence 11221 110 12667776542 1123678899
Q ss_pred cEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEE---EEEEEecCceeeeeee
Q 042677 384 GWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWT---AVYAYLDNPGMWNLRS 460 (504)
Q Consensus 384 ~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~---~irf~adnpG~w~~HC 460 (504)
++|+|+|.|.+...||||||||.|+|+..+... .....+.++||+.|.|++.. +++|++||||.|+|||
T Consensus 198 e~Vr~~liN~~~~~HpfHlHGh~F~v~~~g~~~--------~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HC 269 (299)
T 3t9w_A 198 ERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRT--------SEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHC 269 (299)
T ss_dssp CEEEEEEEEESSCCCEEEETTCCEESSSSSSCC--------STTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEE
T ss_pred CEEEEEEEeccccceeeeEecceEEEEeccccc--------CCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEc
Confidence 999999999999999999999999998875432 12233558999999998654 4556678999999999
Q ss_pred ccchhhhhccEEEEEEecCCC
Q 042677 461 QLLKNWHLGQELYVRVYDADP 481 (504)
Q Consensus 461 Hil~H~~~Gm~~~~~V~~~~~ 481 (504)
||++|++.|||..|+|.+.+.
T Consensus 270 Hi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 270 HVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp CSHHHHHTTCEEEEEEECTTS
T ss_pred CCHHHHhcCCeEEEEEECCCC
Confidence 999999999999999987764
No 44
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.94 E-value=6.4e-26 Score=224.12 Aligned_cols=233 Identities=12% Similarity=0.020 Sum_probs=157.2
Q ss_pred cceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecC------------
Q 042677 157 HESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADK------------ 224 (504)
Q Consensus 157 ~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~------------ 224 (504)
.|.|++++|++++++|.|..... ..+|.||..+. -+.||.... .-.|.||+++...+++..
T Consensus 41 GP~i~~~~Gd~v~v~~~N~l~~~-~siH~HG~~~~-~~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~ 113 (313)
T 3tas_A 41 GPLIELNEGDTLHIEFENTMDVP-VSLHVHGLDYE-ISSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRAG 113 (313)
T ss_dssp CCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCC-GGGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCCCC-ccEeecCCcCC-ccCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccCC
Confidence 49999999999999999998755 57888887654 367887531 123789999998887642
Q ss_pred CCceeEEEEeccCCcCCC-CCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCccCCccce
Q 042677 225 NPADYYIVASPKLSHADA-NSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTRNILTYF 303 (504)
Q Consensus 225 ~~g~y~i~~~~~~~~~~~-~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~~p~~~~ 303 (504)
..|.||++++........ .......+.|.+..... + . +
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~---------~------------------------~----~---- 152 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD---------V------------------------L----P---- 152 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC---------B------------------------C----C----
T ss_pred CceEEEEeecCcccccchhhhhccccCceEeecccc---------c------------------------c----c----
Confidence 358899999853211100 00011223232322110 0 0 0
Q ss_pred eeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCC
Q 042677 304 SEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHR 383 (504)
Q Consensus 304 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 383 (504)
++.+. |.. ..|++|+..+.. ...+.++.|
T Consensus 153 -----d~e~~---l~~--------~d~t~Ng~~~~~-----------------------------------~~~l~v~~G 181 (313)
T 3tas_A 153 -----DRTHT---IVF--------NDMTINNRPAHT-----------------------------------GPDFEATVG 181 (313)
T ss_dssp -----SEEEE---EEE--------ETTEETTCCTTC-----------------------------------CCCEEEETT
T ss_pred -----cccce---eec--------cchhcccCCccc-----------------------------------ccccccccC
Confidence 11221 111 126778765421 112678899
Q ss_pred cEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEE---ecCceeeeeee
Q 042677 384 GWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAY---LDNPGMWNLRS 460 (504)
Q Consensus 384 ~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~---adnpG~w~~HC 460 (504)
++|+|+|.|.+.+.||||||||.|+|+..+... .....+.++||+.|.|++.+.+++. ++|||.|+|||
T Consensus 182 e~vr~~liN~g~~~hpfHlHGh~F~v~~~~~~~--------~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HC 253 (313)
T 3tas_A 182 DRVEFVMITHGEYYHTFHLHGHRWADNRTGMLT--------GPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHC 253 (313)
T ss_dssp CEEEEEEEEESSCCEEEEETTCCEESSTTSSCC--------STTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEE
T ss_pred CEEEEEEecccccceeeeecCCeeEEEEECCcc--------CCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEe
Confidence 999999999999999999999999998775321 1234477999999999988877765 47999999999
Q ss_pred ccchhhhhccEEEEEEecCCCCCCCCCCCCCC-cccCcC
Q 042677 461 QLLKNWHLGQELYVRVYDADPNPNKERPPPEN-LLLCDG 498 (504)
Q Consensus 461 Hil~H~~~Gm~~~~~V~~~~~~~~~~~~~p~~-~~~c~~ 498 (504)
||++|++.|||..|+|.+++..+ ....|.. ...|-.
T Consensus 254 Hi~~H~~~GM~~~f~V~~~d~~~--p~~~p~~~~~~~~~ 290 (313)
T 3tas_A 254 HVQSHSDMGMVGLFLVKKPDGTI--PGYDPHRHHHGAAS 290 (313)
T ss_dssp CSHHHHHTTCEEEEEEECTTCCC--TTCCTTCCBTTBCC
T ss_pred CChHHHHCCCeEEEEEECCCCCC--CCCCcccccccccc
Confidence 99999999999999999887533 2234444 345533
No 45
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=1.1e-24 Score=214.61 Aligned_cols=235 Identities=17% Similarity=0.167 Sum_probs=137.1
Q ss_pred EEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCccc----ceeeceEEEcCCcEE
Q 042677 141 MLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTN----KIKLDSLDVHVGQSY 216 (504)
Q Consensus 141 ~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~v~l~~geR~ 216 (504)
.++||... |.|++++|+++++||.|.... .+.+|.||..+. .+.||.+.. +...+...|.||||+
T Consensus 52 ~~~n~~pG---------P~I~v~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~ 120 (306)
T 1sdd_A 52 SRTSGLLG---------PTLYAEVGDIMKVHFKNKAHK-PLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEY 120 (306)
T ss_dssp CSSCCSCC---------CCEEEETTCEEEEEEEECSSS-CBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEE
T ss_pred cccCCccC---------CEEEEeCCCEEEEEEEECCCC-cccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeE
Confidence 45787654 999999999999999998764 457777776642 368998752 233445679999999
Q ss_pred EEEEEecCCC---------ceeEEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCcccccccccccccc
Q 042677 217 SVLVTADKNP---------ADYYIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGC 287 (504)
Q Consensus 217 dv~v~~~~~~---------g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~ 287 (504)
+..+++++.+ |+||++++.....+ ....+.+ ++|.+....... .+.+. ..+ .++.+.
T Consensus 121 ~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q-~~~GL~G-~liV~~~~~~~~-~~~~~-----~~d------~e~~l~ 186 (306)
T 1sdd_A 121 TYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED-FNSGLIG-PLLICKKGTLTE-DGTQK-----MFE------KQHVLM 186 (306)
T ss_dssp EEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH-HHTTCCE-EEEEECTTCBCT-TSSBS-----SSC------CCCCCB
T ss_pred EEEEEeCCccCCCCCCCCceEEEEeccCCchhh-hccCceE-EEEEccCCCCCc-cCCcC-----ccc------ceEEEE
Confidence 9999997643 69999998432100 0012223 344333221100 00110 000 000000
Q ss_pred ccccCCCCccCCccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCC
Q 042677 288 FVNSYHRNTRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNAS 367 (504)
Q Consensus 288 l~~~~~~p~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~ 367 (504)
+.. +. -..+. .......|.|||..|.. .|
T Consensus 187 ~~d---------------------~d---~~~~~-~~~~~~~~~ING~~~~~--~p------------------------ 215 (306)
T 1sdd_A 187 FAV---------------------FD---ESKSW-NQTSSLMYTVNGYVNGT--MP------------------------ 215 (306)
T ss_dssp CCE---------------------EE---TTSSS-SCCCCEEECSSSCCSSC--CC------------------------
T ss_pred EEe---------------------cc---ccccc-ccCCCcceeeCCEecCC--Cc------------------------
Confidence 100 00 00000 00112357788887521 11
Q ss_pred CCCcccceEEEeeeCCcEEEEEEEeCCC--CcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEE
Q 042677 368 NVDAIRGVFVATGIHRGWIEIVLKNELE--VIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTA 445 (504)
Q Consensus 368 ~~~~~~~~~~~~~~~g~~v~ivi~N~~~--~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~ 445 (504)
.+.++.|++++|+|.|.+. ..|+||||||.|++ +| .++||+.|.||+.+.
T Consensus 216 ---------~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~ 267 (306)
T 1sdd_A 216 ---------DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTT 267 (306)
T ss_dssp ---------CCCCCCC------BBCCCSSSCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC
T ss_pred ---------ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee----CC---------------EEcceEEECCCcEEE
Confidence 1456789999999999985 47999999999986 22 258999999999999
Q ss_pred EEEEecCceeeeeeeccchhhhhccEEEEEEecC
Q 042677 446 VYAYLDNPGMWNLRSQLLKNWHLGQELYVRVYDA 479 (504)
Q Consensus 446 irf~adnpG~w~~HCHil~H~~~Gm~~~~~V~~~ 479 (504)
|+|++++||.|+||||+++|++.|||..++|.+.
T Consensus 268 v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 268 ANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp --------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred EEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 9999999999999999999999999999999754
No 46
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.88 E-value=1.7e-22 Score=219.23 Aligned_cols=243 Identities=13% Similarity=0.156 Sum_probs=145.8
Q ss_pred ceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccc----eeeceEEEcCCcEEEEEEEecCC-----Cc-
Q 042677 158 ESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNK----IKLDSLDVHVGQSYSVLVTADKN-----PA- 227 (504)
Q Consensus 158 p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p----~~~d~v~l~~geR~dv~v~~~~~-----~g- 227 (504)
|.|++++|+++++||.|..... +.+|.||.... .+.||.+... ..+....|.||++++..+++++. +|
T Consensus 69 P~I~~~~Gd~v~v~~~N~l~~~-~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~ 146 (647)
T 1sdd_B 69 PVIRAEVDDVIQVRFKNLASRP-YSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGS 146 (647)
T ss_dssp CCEEEETTCEEEEEECCCSSSC-BCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSSC
T ss_pred ceEEEeCCCEEEEEEEECCCCc-eEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCC
Confidence 9999999999999999998754 46777776553 5789976421 22334579999999999999864 57
Q ss_pred ---eeEEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccc-cccccccCCCCccCCccce
Q 042677 228 ---DYYIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDI-RGCFVNSYHRNTRNILTYF 303 (504)
Q Consensus 228 ---~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~-~~~l~~~~~~p~~~p~~~~ 303 (504)
+||+|++.....+ ....+.+. +|.............|.. ..+....+..+... .+.+... ..
T Consensus 147 ~c~T~wYHsH~~~~~q-~~~GL~G~-lIV~~~~~~~~~~~~~~~--~~e~~l~l~~~d~~~~w~~~~~-------~~--- 212 (647)
T 1sdd_B 147 ACRAWAYYSAVNPEKD-IHSGLIGP-LLICRKGTLDKETNMPVD--MREFVLLFMVFDEKKSWYYDKK-------PT--- 212 (647)
T ss_dssp SEEEEEEECCSSHHHH-HTTTCEEE-EEEECTTSSCTTSCCCSS--CCEEEEEEEEEEGGGSSCCC--------------
T ss_pred CceEEEEccCCCCccc-ccccCccC-EEEeeCCCcccccCCCCc--ceeEEEEEEeecCccccccccC-------cc---
Confidence 9999998632111 01122333 333322211110011110 01111111110000 0111000 00
Q ss_pred eeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCC
Q 042677 304 SEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHR 383 (504)
Q Consensus 304 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 383 (504)
..+. ..... .......+.|||..|. .| .+.++.|
T Consensus 213 ------~~~~--~~~~~--~~~~~~~~~iNG~~~~---~p---------------------------------~l~v~~G 246 (647)
T 1sdd_B 213 ------RSWR--RASSE--VKNSHEFHAINGMIYN---LP---------------------------------GLRMYEQ 246 (647)
T ss_dssp ---------------------CCCEEEEETTBSSC---CC---------------------------------CCEEETT
T ss_pred ------cccc--cCCcc--hhhcCceeccCCEecC---CC---------------------------------CeEEcCC
Confidence 0000 00000 0111346889998751 11 1567899
Q ss_pred cEEEEEEEeCCC--CcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceeeeeeec
Q 042677 384 GWIEIVLKNELE--VIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWNLRSQ 461 (504)
Q Consensus 384 ~~v~ivi~N~~~--~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCH 461 (504)
++|+|+|.|.+. +.||||+|||.|+|++.. +.++||+.|.||+.+.|+|++++||.|+||||
T Consensus 247 ~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch 310 (647)
T 1sdd_B 247 EWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLLDTE 310 (647)
T ss_dssp CEEEEEEEECCCTTCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEEECC
T ss_pred CEEEEEEEeCCCCCcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeecccC
Confidence 999999999884 489999999999998652 34799999999999999999999999999999
Q ss_pred cchhhhhccEEEEEEec
Q 042677 462 LLKNWHLGQELYVRVYD 478 (504)
Q Consensus 462 il~H~~~Gm~~~~~V~~ 478 (504)
+++|++.|||..|.|.+
T Consensus 311 ~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 311 VGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp CHHHHTTTCEEEEEEEC
T ss_pred cccccccccccceeeec
Confidence 99999999999999974
No 47
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.88 E-value=6.1e-22 Score=196.93 Aligned_cols=248 Identities=16% Similarity=0.125 Sum_probs=162.3
Q ss_pred CeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCC-eeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEE
Q 042677 139 DWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTA-WSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYS 217 (504)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~d 217 (504)
..|++||+.. .|.|++++|++++||++|.... ..+.+|+||.. +.||... ...|.|||+++
T Consensus 59 ~~~~~ng~~p--------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~~ 120 (327)
T 1kbv_A 59 RYWTFDGDVP--------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTST 120 (327)
T ss_dssp EEEEETTBSS--------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEEE
T ss_pred EEEEECCccC--------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEEE
Confidence 4799999865 3899999999999999999763 45788888853 6788642 12489999999
Q ss_pred EEEEecCCCceeEEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCcc
Q 042677 218 VLVTADKNPADYYIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTR 297 (504)
Q Consensus 218 v~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~ 297 (504)
+.++++ .+|+||++|+.............+ +++. .... ++|. .+....+ ...+ +...... .
T Consensus 121 y~f~~~-~~Gt~wyH~h~~~~~~~~~~Gl~G-~~iV-~~~~-----~~p~----~d~e~~l-~~~d--~~~~~~~--~-- 181 (327)
T 1kbv_A 121 FSFKAL-QPGLYIYHCAVAPVGMHIANGMYG-LILV-EPKE-----GLPK----VDKEFYI-VQGD--FYTKGKK--G-- 181 (327)
T ss_dssp EEEECC-SCEEEEEECCCSSHHHHHHTTCEE-EEEE-ECTT-----CCCC----CSEEEEE-EEEE--ECBSSCT--T--
T ss_pred EEEECC-CCeEEEEEeCCCChhhhhhcceEE-EEEE-ecCC-----CCCC----CceEEEE-Eeee--eeccCcc--c--
Confidence 999998 489999999853210000001222 2333 3321 1221 1111110 0011 1000000 0
Q ss_pred CCccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEE
Q 042677 298 NILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFV 377 (504)
Q Consensus 298 ~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (504)
.+ +. . .+. +.... ......+.|||+.+... ....
T Consensus 182 ~~-g~-----~--~~~---~~~~~--~~~~~~~~iNG~~~~~~---------------------------------~~~~ 215 (327)
T 1kbv_A 182 AQ-GL-----Q--PFD---MDKAV--AEQPEYVVFNGHVGALT---------------------------------GDNA 215 (327)
T ss_dssp CC-EE-----E--CBC---HHHHH--HTCCSEEEETTSTTTTS---------------------------------GGGC
T ss_pred cc-cc-----c--ccC---hhHhc--cCCCceEEEcCcccCCC---------------------------------Ccee
Confidence 00 00 0 000 11000 01124688999865210 0123
Q ss_pred EeeeCCcEEEEEEEeCC-CCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 378 ATGIHRGWIEIVLKNEL-EVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 378 ~~~~~g~~v~ivi~N~~-~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
+.++.|++++|+|.|.+ ...|+||||||.|+||+...+.. .|.++|++.|.||+.+.|.|++++||.|
T Consensus 216 l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~-----------~p~~~d~l~l~pGer~dv~v~~~~pG~y 284 (327)
T 1kbv_A 216 LKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL-----------INENVQSTIVPAGGSAIVEFKVDIPGNY 284 (327)
T ss_dssp EEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEEECSCEEE
T ss_pred EEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcC-----------CCCceeEEEECCCCEEEEEEEeCCCeEE
Confidence 67889999999999987 57899999999999999854321 2568999999999999999999999999
Q ss_pred eeeeccchhh-hhccEEEEEEecCC
Q 042677 457 NLRSQLLKNW-HLGQELYVRVYDAD 480 (504)
Q Consensus 457 ~~HCHil~H~-~~Gm~~~~~V~~~~ 480 (504)
+||||++.|. ..||+..++|....
T Consensus 285 ~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 285 TLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEeccccccccCCcEEEEEECCCC
Confidence 9999999995 88999999997554
No 48
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.87 E-value=2.6e-21 Score=193.79 Aligned_cols=262 Identities=15% Similarity=0.155 Sum_probs=156.7
Q ss_pred CeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCC-eeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEE
Q 042677 139 DWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTA-WSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYS 217 (504)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~d 217 (504)
..+++||+.. .|.|++++|+++|+|++|.... ..|.++++++.. +.||. +.. .|.|||+++
T Consensus 60 ~~~~~ng~~p--------gP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~---~~~----~i~PG~~~~ 121 (340)
T 2bw4_A 60 HAMTFNGSVP--------GPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGG---ALT----QVNPGEETT 121 (340)
T ss_dssp EEEEETTBSS--------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGG---GGC----CBCTTEEEE
T ss_pred EEEEECCCCC--------CCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCc---cce----EeCCCCEEE
Confidence 5799999954 2899999999999999999742 345667776542 22332 222 399999999
Q ss_pred EEEEecCCCceeEEEEeccCCc-CCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCc
Q 042677 218 VLVTADKNPADYYIVASPKLSH-ADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNT 296 (504)
Q Consensus 218 v~v~~~~~~g~y~i~~~~~~~~-~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~ 296 (504)
+.++++ .+|+||++|+..... ........+. ++.......+...+.|. ..+.+..+ ...+ +.+..
T Consensus 122 y~~~~~-~~Gt~wyH~h~~~~~~~~~~~Gl~G~-~iV~~~~~~~~~~~~p~---~~d~e~~l-~l~D--~~~~~------ 187 (340)
T 2bw4_A 122 LRFKAT-KPGVFVYHCAPEGMVPWHVTSGMNGA-IMVLPRDGLKDEKGQPL---TYDKIYYV-GEQD--FYVPK------ 187 (340)
T ss_dssp EEEECC-SCEEEEEECCCTTCHHHHHHTTCEEE-EEEECTBCEECTTSCEE---CCSEEEEE-EEEE--ECCCB------
T ss_pred EEEECC-CCeEEEEEcCCCCchhhHHhCcCEEE-EEEccCcCcccccCCCc---CcceeEEE-eeee--eeecc------
Confidence 999998 499999999864210 0000122332 23222211100000111 01111100 0011 10000
Q ss_pred cCCccceeeeee-eeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccce
Q 042677 297 RNILTYFSEINA-TFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGV 375 (504)
Q Consensus 297 ~~p~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (504)
.+.+....... ..... ..+.. +. ......|.|||+.|... ..
T Consensus 188 -~~~g~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~iNG~~~~~~---------------------------------~~ 230 (340)
T 2bw4_A 188 -DEAGNYKKYETPGEAYE-DAVKA-MR-TLTPTHIVFNGAVGALT---------------------------------GD 230 (340)
T ss_dssp -CTTSCBCCCCSHHHHHH-HHHHH-HH-TTCCSEEEETTSTTTTS---------------------------------GG
T ss_pred -ccCCccccccccccccc-chhhH-hh-cCCCCEEEECCccCCcc---------------------------------CC
Confidence 00000000000 00000 00000 00 01124688999875211 01
Q ss_pred EEEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCC-cccEEEeCCCcEEEEEEEecCce
Q 042677 376 FVATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPV-VRSTVQVYPGAWTAVYAYLDNPG 454 (504)
Q Consensus 376 ~~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~-~rDTv~vp~~g~~~irf~adnpG 454 (504)
..+.++.|++++|++.|.+...|++|+|||.|+|+.. |.+. ..|. ++||+.|.+|+.+.|.|++++||
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi~d--G~~~---------~~p~~~~dtv~l~pGer~~v~v~~~~pG 299 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWAT--GKFR---------NPPDLDQETWLIPGGTAGAAFYTFRQPG 299 (340)
T ss_dssp GCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEETT--CCTT---------SCCEEEESCCCBCTTEEEEEEEECCSCE
T ss_pred CceEcCCCCEEEEEECCCCCccceEEecCcceEEeCC--Cccc---------CCccccceEEEeCCCceEEEEEECCCCe
Confidence 2367889999999888888889999999999999863 3221 1122 57999999999999999999999
Q ss_pred eeeeeeccc-hhhhhccEEEEEEecCC
Q 042677 455 MWNLRSQLL-KNWHLGQELYVRVYDAD 480 (504)
Q Consensus 455 ~w~~HCHil-~H~~~Gm~~~~~V~~~~ 480 (504)
.|+||||++ +|++.|||..++|....
T Consensus 300 ~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 300 VYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp EEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred eeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 999999999 59999999999998654
No 49
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.85 E-value=3.4e-22 Score=218.26 Aligned_cols=244 Identities=13% Similarity=0.100 Sum_probs=150.3
Q ss_pred cceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecC---------CCc
Q 042677 157 HESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADK---------NPA 227 (504)
Q Consensus 157 ~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~---------~~g 227 (504)
.|.|+++.|++++++|.|.... .+.+|.||..+..-.-||.+- + ...|.||++++..+++.+ .+|
T Consensus 198 GP~Ir~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~~~~dG~~~-~----~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 198 GPYIRAEVEDNIMVTFRNQASR-PYSFYSSLISYEEDQRQGAEP-R----KNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CCCCCCCSSSCEEEEEECCSSS-CCCCCBTTCCCCCCSSSCTTT-T----SSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCeEEEEcCCEEEEEEEECCCC-CcceeecccccccccCCCCcC-c----cCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 4899999999999999999864 457788887665544458642 1 235889999999999875 578
Q ss_pred eeEEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCcccc--ccccccc-cccccccCCCCccCCcccee
Q 042677 228 DYYIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLS--IDQAKDI-RGCFVNSYHRNTRNILTYFS 304 (504)
Q Consensus 228 ~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~--~~~~~~~-~~~l~~~~~~p~~~p~~~~~ 304 (504)
.||++++.....+ . .....+.|.+......... ..+...+.+.. +..++.. .+-+......-...|....
T Consensus 272 t~wYHsh~~~~~q-~--~~GL~G~liV~~~~~~~~~---~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~- 344 (770)
T 2r7e_B 272 AWAYSSDVDLEKD-V--HSGLIGPLLVCHTNTLNPA---HGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCNIQ- 344 (770)
T ss_dssp EEEECCCSSSSHH-H--HTSCCEEEEEECSTTSCSS---SCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCC-
T ss_pred eEEeeccCCcHHH-H--hCCceeeEEECCCcccccc---cCCCccceEEEEEEeecCccccchhccchhhcccCccccc-
Confidence 9999998643111 0 1112233333332211000 00000111100 0000100 0000000000000010000
Q ss_pred eeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEEEeeeCCc
Q 042677 305 EINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFVATGIHRG 384 (504)
Q Consensus 305 ~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 384 (504)
..+..+ ......|.|||..|. . ...+.++.|+
T Consensus 345 --~~d~~~-----------~~~~~~~~ING~~~~--~---------------------------------~~~l~v~~Ge 376 (770)
T 2r7e_B 345 --MEDPTF-----------KENYRFHAINGYIMD--T---------------------------------LPGLVMAQDQ 376 (770)
T ss_dssp --SSSSSS-----------TTTSCEECTTSCTTT--T---------------------------------CCCCCCCSSS
T ss_pred --cCCccc-----------cccCCccccCCccCC--C---------------------------------CCCeEEeCCC
Confidence 000000 011234678887541 0 1124578899
Q ss_pred EEEEEEEeCCC--CcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceeeeeeecc
Q 042677 385 WIEIVLKNELE--VIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWNLRSQL 462 (504)
Q Consensus 385 ~v~ivi~N~~~--~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHi 462 (504)
+|+|+|.|.+. +.||||||||.|+|++.+ | .++||+.|+|++++.|+|++|+||.|+||||+
T Consensus 377 ~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~d-g---------------~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~ 440 (770)
T 2r7e_B 377 RIRWYLLSMGSNENIHSIHFSGHVFTVRKKE-E---------------YKMALYNLYPGVFETVEMLPSKAGIWRVECLI 440 (770)
T ss_dssp CEEEECCCCCSSSCCCEEEBSSCCEECCSSS-C---------------CEESEEECCTTCCCEEEECCSSCBCCCBCCCS
T ss_pred EEEEEEEeCCCCcceEEEEEcCCEEEEEecC-C---------------ceeeEEEECCCeEEEEEEEeCCCCceEEEecc
Confidence 99999999874 489999999999998763 1 28999999999999999999999999999999
Q ss_pred chhhhhccEEEEEEe
Q 042677 463 LKNWHLGQELYVRVY 477 (504)
Q Consensus 463 l~H~~~Gm~~~~~V~ 477 (504)
++|++.|||..|.|.
T Consensus 441 ~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 441 GEHLHAGMSTLFLVY 455 (770)
T ss_dssp HHHHTTBCCCCCCBC
T ss_pred ccccccccccccccc
Confidence 999999999999884
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.84 E-value=2e-19 Score=179.53 Aligned_cols=262 Identities=13% Similarity=0.055 Sum_probs=151.4
Q ss_pred CeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCe-eEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEE
Q 042677 139 DWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAW-SFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYS 217 (504)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~d 217 (504)
..+++||+.. .|.|++++|+++++|+.|.+... .|.++++++. ..||. .+.. .|.||++++
T Consensus 53 ~~~~~ng~~p--------gP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~--~~~~----~i~PG~~~~ 114 (333)
T 1mzy_A 53 QAMTFDGSIP--------GPLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGG--GGLT----LINPGEKVV 114 (333)
T ss_dssp EEEEETTBSS--------CCEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGG--GGGC----CBCTTEEEE
T ss_pred EEEEECCccC--------CCcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCC--Ccee----EeCCCCEEE
Confidence 4799999964 38999999999999999996422 2344444321 12222 1222 389999999
Q ss_pred EEEEecCCCceeEEEEeccC-C-cCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCC
Q 042677 218 VLVTADKNPADYYIVASPKL-S-HADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRN 295 (504)
Q Consensus 218 v~v~~~~~~g~y~i~~~~~~-~-~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p 295 (504)
+.++++ .+|.||++|+... . .........+.-|++ .... ...+.. .|...+.+..+ ...+ +.+...
T Consensus 115 y~f~~~-~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~--~~~~-~~~~~~-~p~~~d~e~~l-~l~D--~~~~~~---- 182 (333)
T 1mzy_A 115 LRFKAT-RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVL--PRDG-LKDHEG-KPVRYDTVYYI-GESD--HYIPKD---- 182 (333)
T ss_dssp EEEECC-SCEEEEEECCCSTTHHHHHHHTTCEEEEEEE--CTTC-CBCTTS-CBCCCSEEEEE-EEEE--ECCCBC----
T ss_pred EEEECC-CCEEEEEeecCCcccchhhhhCCCEEEEEEc--cCcC-cccccc-CCCccchheee-eeee--eccCcc----
Confidence 999997 5999999998642 0 000001233333333 2211 000000 01011111100 0011 101000
Q ss_pred ccCCccceeeeee-eeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccc
Q 042677 296 TRNILTYFSEINA-TFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRG 374 (504)
Q Consensus 296 ~~~p~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (504)
..+....... ...+. ..+.. +. ......|.|||+.+..+ +
T Consensus 183 ---~~g~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~ING~~~~~~---------------------------------~ 223 (333)
T 1mzy_A 183 ---EDGTYMRFSDPSEGYE-DMVAV-MD-TLIPSHIVFNGAVGALT---------------------------------G 223 (333)
T ss_dssp ---TTSCBCCCSSHHHHHH-HHHHH-HT-TTCCSEEEETTSTTTTS---------------------------------G
T ss_pred ---cccccccccccccccc-chhHH-hh-ccCCcEEEECCcccccC---------------------------------C
Confidence 0000000000 00000 00000 00 01124689999864211 0
Q ss_pred eEEEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCC-cccEEEeCCCcEEEEEEEecCc
Q 042677 375 VFVATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPV-VRSTVQVYPGAWTAVYAYLDNP 453 (504)
Q Consensus 375 ~~~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~-~rDTv~vp~~g~~~irf~adnp 453 (504)
...+.++.|++++|++.|.+...|++++|||.|.|++ +|.+. ..|. ++||+.|.||+.+.|.|.+++|
T Consensus 224 ~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi~--dG~~~---------~~p~~~~dtv~l~pGer~~v~v~a~~p 292 (333)
T 1mzy_A 224 EGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVWE--TGKFH---------NAPERDLETWFIRGGTAGAALYKFLQP 292 (333)
T ss_dssp GGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEECCSC
T ss_pred CcceEecCCCEEEEEECCCCCccccEEECCCCeEEEe--CCccc---------CCCccCcceEEECCCceEEEEEEcCCC
Confidence 1126788999999887777666667778889999987 34322 1122 6899999999999999999999
Q ss_pred eeeeeeeccchhh-hhccEEEEEEecCC
Q 042677 454 GMWNLRSQLLKNW-HLGQELYVRVYDAD 480 (504)
Q Consensus 454 G~w~~HCHil~H~-~~Gm~~~~~V~~~~ 480 (504)
|.|+||||++.|+ +.|||..|+|....
T Consensus 293 G~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 293 GVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp EEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 9999999999997 99999999998654
No 51
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.80 E-value=8.1e-19 Score=182.04 Aligned_cols=249 Identities=14% Similarity=0.086 Sum_probs=163.3
Q ss_pred CeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCC-eeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEE
Q 042677 139 DWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTA-WSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYS 217 (504)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~d 217 (504)
..|++||+.. .|.|++++|++++||+.|.... ..+.+|+||+. ..||... ...|.||++++
T Consensus 49 ~~~~~ng~~p--------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~ 110 (442)
T 2zoo_A 49 VFWSFGETVP--------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTST 110 (442)
T ss_dssp EEEEETTBSS--------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEE
T ss_pred EEEEECCcCC--------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEE
Confidence 4799999974 2899999999999999999643 46789999965 4677542 23589999999
Q ss_pred EEEEecCCCceeEEEEeccCCcCCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccCCCCcc
Q 042677 218 VLVTADKNPADYYIVASPKLSHADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSYHRNTR 297 (504)
Q Consensus 218 v~v~~~~~~g~y~i~~~~~~~~~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~p~~ 297 (504)
+.++++ ++|.||++|+........ .....+.+.+.... .+|. .+.+..+ .+.+ +.+......
T Consensus 111 y~f~~~-~~Gt~~yH~H~~~~~~~~--~~Gl~G~~iv~~~~-----~~~~----~d~e~~l-~l~d--~~~~~~~~~--- 172 (442)
T 2zoo_A 111 FNFKAL-NPGLYIYHCATAPVGMHI--ANGMYGLILVEPKE-----GLAP----VDREYYL-VQGD--FYTKGEFGE--- 172 (442)
T ss_dssp EEEECC-SCEEEEEECCCSSHHHHH--HTTCEEEEEEECTT-----CCCC----CSEEEEE-EEEE--ECBSSCTTC---
T ss_pred EEEEcC-CCeEEEEecCCCChHHHH--hCccEEEEEEeCCC-----CCCC----CCceEEE-Eeee--eeccCcccc---
Confidence 999997 699999999642110000 01123344444321 1111 1111111 0111 111000000
Q ss_pred CCccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccceEE
Q 042677 298 NILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGVFV 377 (504)
Q Consensus 298 ~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (504)
+. ...+. +... . ......+.|||+.+.... ...
T Consensus 173 -~~--------~~~~~---~~~~-~-~~~~~~~liNG~~~~~~~---------------------------------~~~ 205 (442)
T 2zoo_A 173 -AG--------LQPFD---MAKA-I-DEDADYVVFNGSVGSTTD---------------------------------ENS 205 (442)
T ss_dssp -CE--------EECBC---HHHH-H-TTCCSEEEETTSTTTTSG---------------------------------GGC
T ss_pred -cc--------cccCC---hhHh-c-cCCCCEEEECCCcCCCCC---------------------------------CCc
Confidence 00 00000 1100 0 011245789998642100 012
Q ss_pred EeeeCCcEEEEEEEeCC-CCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 378 ATGIHRGWIEIVLKNEL-EVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 378 ~~~~~g~~v~ivi~N~~-~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
+.++.|++++|+|.|.+ ...|+||+||+.|.|++...+.. .|.+.|++.|.||+.+.|.|++++||.|
T Consensus 206 l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~-----------~p~~~~~~~l~pg~r~~v~v~~~~~G~y 274 (442)
T 2zoo_A 206 LTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL-----------KNHNVQTTLIPAGGAAIVEFKVEVPGTF 274 (442)
T ss_dssp EEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC-----------EECSBSEEEECTTEEEEEEEECCSCEEE
T ss_pred eEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC-----------CCccceEEEECCCeeEEEEEEcCCCCeE
Confidence 67889999999999976 57899999999999999853311 1568899999999999999999999999
Q ss_pred eeeeccchh-hhhccEEEEEEecCCC
Q 042677 457 NLRSQLLKN-WHLGQELYVRVYDADP 481 (504)
Q Consensus 457 ~~HCHil~H-~~~Gm~~~~~V~~~~~ 481 (504)
++|||.+.| .+.||+..+.|...+.
T Consensus 275 ~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 275 ILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEEecccccccccCceEEEEecCCCC
Confidence 999999999 5999999999986653
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.78 E-value=8.1e-18 Score=168.12 Aligned_cols=262 Identities=14% Similarity=0.108 Sum_probs=155.6
Q ss_pred CeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCC-eeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEE
Q 042677 139 DWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTA-WSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYS 217 (504)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~d 217 (504)
..|++||+.. .|.|++++|+++++|+.|.... ..|.++++++.. +.||..+ . .|.||++++
T Consensus 54 ~~~~~ng~~p--------gP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~---~----~i~pG~~~~ 115 (336)
T 1oe1_A 54 QAMTFNGSMP--------GPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKL---T----NVNPGEQAT 115 (336)
T ss_dssp EEEEETTBSS--------CCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG---C----CBCTTEEEE
T ss_pred EEEEECCccC--------CCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcce---E----EeCCCCEEE
Confidence 4799999864 2899999999999999999753 456788888752 2233222 1 389999999
Q ss_pred EEEEecCCCceeEEEEeccCCc-CCCCCCceeEEEEEeeCCCCCCCCCCCCCCCCCCccccccccccccccccccC-CCC
Q 042677 218 VLVTADKNPADYYIVASPKLSH-ADANSSIYGVAVLHYDNSTTPPIGIPPKGLDPFNLQLSIDQAKDIRGCFVNSY-HRN 295 (504)
Q Consensus 218 v~v~~~~~~g~y~i~~~~~~~~-~~~~~~~~~~~il~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~l~~~~-~~p 295 (504)
..++++ .+|+||++|+..... ........+.-|++-... .+ .+.+. +...+....+ ...+......... ...
T Consensus 116 y~f~~~-~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~-~~--~~~~~-~~~~D~e~~l-~~~D~~~~~~~~g~~~~ 189 (336)
T 1oe1_A 116 LRFKAD-RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDG-LK--DPQGK-PLHYDRAYTI-GEFDLYIPKGPDGKYKD 189 (336)
T ss_dssp EEEECC-SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTC-CB--CTTSC-BCCCSEEEEE-EEEEECCCBCTTSSBCC
T ss_pred EEEECC-CCeEEEEecCCCCchhHHHhCCCeEEEEEecCcC-Cc--ccccC-cccCCceeEe-eeeeeeeccccCCceee
Confidence 999997 599999999863210 000012333333332111 10 11111 1011111110 0011000000000 000
Q ss_pred ccCCccceeeeeeeeEEeeeeecccccccCCceEEEEcceeeeCCCcchhhhhhhcCCCCccccCCCCCCCCCCCcccce
Q 042677 296 TRNILTYFSEINATFTYLRSKVMRSLAGIDGAPLYTVNNVSYLTPETPLKLADKFANGSGVYELDKFPVNASNVDAIRGV 375 (504)
Q Consensus 296 ~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iNg~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (504)
-..+.... .+ . +.. +. ......+.|||+.+... +.
T Consensus 190 ~~~~~~~~----~~-~-----~~~-~~-~~~~~~~liNG~~~~~~---------------------------------~~ 224 (336)
T 1oe1_A 190 YATLAESY----GD-T-----VQV-MR-TLTPSHIVFNGKVGALT---------------------------------GA 224 (336)
T ss_dssp CSSTGGGH----HH-H-----HHH-HH-TTCCSEEEETTSTTTTS---------------------------------GG
T ss_pred cccccccc----cc-h-----hhH-hh-cCCCCEEEECCeeccCC---------------------------------CC
Confidence 00000000 00 0 000 00 01124688888764210 01
Q ss_pred EEEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCC-CcccEEEeCCCcEEEEEEEecCce
Q 042677 376 FVATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDP-VVRSTVQVYPGAWTAVYAYLDNPG 454 (504)
Q Consensus 376 ~~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p-~~rDTv~vp~~g~~~irf~adnpG 454 (504)
..+.++.|++++|+..+.+...+++++|||.|.|+. +|.+. ..| .+.||+.|++|+.+.+.+.+++||
T Consensus 225 ~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~Vi~--DG~~~---------~p~~~~~dtv~i~pGer~dvlv~~~~pG 293 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQANRDTRPHLIGGHGDWVWE--TGKFA---------NPPQRDLETWFIRGGSAGAALYTFKQPG 293 (336)
T ss_dssp GCEEEETTCEEEEEEEESSSCBCEEETTCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEECCSCE
T ss_pred cceEcCCCCEEEEEecCCCCccceEEECCcCceEeC--CCcCc---------CCccccceEEEECCCCcEEEEEEcCCCc
Confidence 236788999999876666667777778999999985 34321 112 157999999999999999999999
Q ss_pred eeeeeeccchhh-hhccEEEEEEecCC
Q 042677 455 MWNLRSQLLKNW-HLGQELYVRVYDAD 480 (504)
Q Consensus 455 ~w~~HCHil~H~-~~Gm~~~~~V~~~~ 480 (504)
.|+||||.+.|. +.||+..++|....
T Consensus 294 ~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 294 VYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp EEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred eEEEEechhhccccCCCeEEEEECCCC
Confidence 999999999885 99999999998654
No 53
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.65 E-value=3.2e-15 Score=154.77 Aligned_cols=210 Identities=11% Similarity=0.056 Sum_probs=134.9
Q ss_pred CCCeEEEcCCCeEEEEEEeCC-CCCeeeee-CCcCCCCCCCCCCCcc-----c-CCcCCCCCeEEEEEEeCCCceeeeee
Q 042677 3 PGPLINCSTDDMIHVNVFNKM-DEPLLFTW-NGIQQRLNSWQDGVSG-----T-NCPIQPGTNWTYVFQTKDQIGSFFYF 74 (504)
Q Consensus 3 PgP~i~~~~Gd~v~i~v~N~l-~~~~siH~-HG~~~~~~~~~DG~~~-----~-~~~i~pg~~~~y~~~~~~~~Gt~wYH 74 (504)
+.|+|+|++| ++++||.|.. .....+|+ ||..+.. ...||.+. + ...|.|||++++.+++ ++.|+||++
T Consensus 191 ~~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~v-i~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~ 267 (451)
T 2uxt_A 191 QSPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHV-ISGDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSIT 267 (451)
T ss_dssp ESCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEE-EECSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEE
T ss_pred ccceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEE-EEeCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEE
Confidence 3589999999 9999999998 56789999 8986553 35899742 3 6779999999999997 468999999
Q ss_pred cchhhhhhCCccc-----------cEEEeCCCCcCCCCCCCCcceeEEeeeeecccHHHHHHHHhccccCCCCCCCeEEE
Q 042677 75 PSINFQKAGGGFG-----------PIRINNRIAINVPFPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAYFNPPDWMLM 143 (504)
Q Consensus 75 ~H~~~~~~~Gl~G-----------~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~li 143 (504)
++........+.| +++-........+. ..+.+..|..+...+. .............|+|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~---~~~~p~~L~~~~~~~~-------~~~~~~~~~l~~~~~i 337 (451)
T 2uxt_A 268 CGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV---TDSLPMRLLPTEIMAG-------SPIRSRDISLGDDPGI 337 (451)
T ss_dssp C----------------CCCCSCCEEEEEEECSCCC-------CCCSCSSSSCCCCC-------CCSEEEEEEECSSSSB
T ss_pred ecCccccccccccccccCCCCCCcceEEEEecCCCcCc---cccCccccCCCCCCCC-------CCcceEEEEEeeEEEE
Confidence 9865332211111 11111100000000 0000100111000000 0000000000004779
Q ss_pred ccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc---cceeeceEEEcCCcEEEEEE
Q 042677 144 NGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT---NKIKLDSLDVHVGQSYSVLV 220 (504)
Q Consensus 144 NG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~---~p~~~d~v~l~~geR~dv~v 220 (504)
||+.+.. ..+.+.++.|++++|+|+|. ..|+||||||.|+|++.||... +|...|+|.| |+++.|.+
T Consensus 338 Ng~~f~~-----~~~~~~~~~G~~~~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~ 407 (451)
T 2uxt_A 338 NGQLWDV-----NRIDVTAQQGTWERWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLV 407 (451)
T ss_dssp TTBCCCT-----TCCCEEEETTCEEEEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEE
T ss_pred CCEeCCC-----CCCcEEcCCCCEEEEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEE
Confidence 9998743 12468999999999999998 4699999999999999999875 4678999999 99999999
Q ss_pred EecCCCce----eEEEEecc
Q 042677 221 TADKNPAD----YYIVASPK 236 (504)
Q Consensus 221 ~~~~~~g~----y~i~~~~~ 236 (504)
+++ ++|. |.++|+-.
T Consensus 408 ~~d-npg~~~g~w~~HCHil 426 (451)
T 2uxt_A 408 YFG-QPSWAHFPFYFNSQTL 426 (451)
T ss_dssp ECC-SCCBTTBCEEEEESSH
T ss_pred EeC-CCCCCCCceEEeCCch
Confidence 998 4665 99999964
No 54
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.64 E-value=8.1e-15 Score=151.48 Aligned_cols=212 Identities=12% Similarity=0.097 Sum_probs=144.0
Q ss_pred CCeEEEcCCCeEEEEEEeCC-CCCeeeeeCCcCCCCCCCCCCCcc-----c-CCcCCCCCeEEEEEEeCCCceeeeeecc
Q 042677 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG-----T-NCPIQPGTNWTYVFQTKDQIGSFFYFPS 76 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~~~~~~~~~DG~~~-----~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H 76 (504)
.|+|+|++| ++++||.|.. .....+|++|..+.. .+.||.+. + ...|.|||+++..+++ +++|.||++|+
T Consensus 187 ~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~ 263 (439)
T 2xu9_A 187 RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYL-IAADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQAL 263 (439)
T ss_dssp SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEE
T ss_pred CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEE-EecCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEec
Confidence 589999999 9999999998 457899999987654 35899863 3 5669999999999997 56999999997
Q ss_pred hhhh--hh-CCc--------------cccEEEe-CCCCcCCCCCCCCcceeEEeeeeecccHHHHHHH-HhccccCCCCC
Q 042677 77 INFQ--KA-GGG--------------FGPIRIN-NRIAINVPFPKPEAEFDLLIGDWYQESYKEIRSK-MKKMQWAYFNP 137 (504)
Q Consensus 77 ~~~~--~~-~Gl--------------~G~liV~-~~~~~~~~~~~~~~e~~l~l~d~~~~~~~~~~~~-~~~~~~~~~~~ 137 (504)
.... .. .|| ....+++ .......+.+... ..+.+....... ... +..+. .
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~l----~~~~~l~~~~~~--r~~~l~~~~-----~ 332 (439)
T 2xu9_A 264 PYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKAL----SPFPTLPAPVVT--RRLVLTEDM-----M 332 (439)
T ss_dssp CCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCCCCCSCC----CCCCCCCCCSEE--EEEEEEEEG-----G
T ss_pred ccccCCccccccccccccccCCCCCcceeEEEEecCCCccccCcccC----CCcccCCCCCcc--eEEEEEeec-----c
Confidence 4211 10 022 1112222 1111111110000 000000000000 000 00000 0
Q ss_pred CCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc-cceeeceEEEcCCcEE
Q 042677 138 PDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT-NKIKLDSLDVHVGQSY 216 (504)
Q Consensus 138 ~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~v~l~~geR~ 216 (504)
...|+|||+.+.. ..+.+.++.|++++|+|.|.+.. .|+||||||.|+|++.+|... .|...|++.|.+|+++
T Consensus 333 g~~~~iNg~~~~~-----~~~~~~~~~g~~~~~~~~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v 406 (439)
T 2xu9_A 333 AARFFINGQVFDH-----RRVDLKGQAQTVEVWEVENQGDM-DHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVA 406 (439)
T ss_dssp GTEEEETTBCCCT-----TCCCEEECTTCEEEEEEEECSSS-CEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEE
T ss_pred CceEeECCEECCC-----CCCceecCCCCEEEEEEEcCCCC-CCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEE
Confidence 1368999998742 12458999999999999999764 489999999999999999865 5788999999999999
Q ss_pred EEEEEecCCCceeEEEEecc
Q 042677 217 SVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 217 dv~v~~~~~~g~y~i~~~~~ 236 (504)
.+.++++ +||.|.+||+-.
T Consensus 407 ~i~f~ad-npG~w~~HCHil 425 (439)
T 2xu9_A 407 RLLVPLR-EKGRTVFHCHIV 425 (439)
T ss_dssp EEEEECC-SCEEEEEEESSH
T ss_pred EEEEEcC-CCCCEEEECCcc
Confidence 9999987 799999999954
No 55
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.61 E-value=1.5e-16 Score=131.02 Aligned_cols=88 Identities=17% Similarity=0.295 Sum_probs=70.3
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCC--CCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeeecch
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLN--SWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSI 77 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~--~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~ 77 (504)
+|++|+|++++||+|+ ++|.+...+++||||..+... ..+||.+ . ++.|.||++++|.|.+++++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~- 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA- 90 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT-
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC-
Confidence 4788999999999975 679988899999999865321 0122222 2 5789999999999986568999999999
Q ss_pred hhhhhCCccccEEEeC
Q 042677 78 NFQKAGGGFGPIRINN 93 (504)
Q Consensus 78 ~~~~~~Gl~G~liV~~ 93 (504)
.+..+||.|.|+|++
T Consensus 91 -~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 -PHRGAGMVGKITVEG 105 (105)
T ss_dssp -TTGGGTCEEEEEECC
T ss_pred -CchhcCCEEEEEEcC
Confidence 466889999999974
No 56
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.61 E-value=4.2e-14 Score=148.53 Aligned_cols=230 Identities=13% Similarity=0.174 Sum_probs=148.2
Q ss_pred CCeEEEcCCCeEEEEEEeCC-CCCeeeeeCCcCCCCCCCCCCCcc----c-CCcCCCCCeEEEEEEeCCCceeeeeecch
Q 042677 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG----T-NCPIQPGTNWTYVFQTKDQIGSFFYFPSI 77 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~~~~~~~~~DG~~~----~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~ 77 (504)
.|+|+|++|+++++||.|.. .....+|++|..+.. .+.||.+. + ...|.|||+++..+++...+|.||.+++.
T Consensus 184 ~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~ 262 (503)
T 1hfu_A 184 LSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTI-IEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQP 262 (503)
T ss_dssp CCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred ceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEE-EeccCccccccccCeEEEcccceEEEEEEcCCCccceeeeecc
Confidence 38999999999999999998 457899999987654 35899743 2 45689999999999975457999999875
Q ss_pred hh--h-----hhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccH--HHHHH-----HHhccc-cCCCCCCCeEE
Q 042677 78 NF--Q-----KAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESY--KEIRS-----KMKKMQ-WAYFNPPDWML 142 (504)
Q Consensus 78 ~~--~-----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~--~~~~~-----~~~~~~-~~~~~~~~~~l 142 (504)
.. + ...|+..+++.........+......+ ...+.+...... ..... ..+... .........|+
T Consensus 263 ~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~-~~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~ 341 (503)
T 1hfu_A 263 NKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPN-PAQLNEADLHALIDPAAPGIPTPGAADVNLRFQLGFSGGRFT 341 (503)
T ss_dssp SSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSS-CCBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEEEETTEEE
T ss_pred ccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCc-cCCCccccccccCccCCCCcccCCcceEEEEEEeeccCceEE
Confidence 31 1 223343344444322111111000000 000000000000 00000 000000 00000012689
Q ss_pred EccccCCCCCC----------------CCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCc----ccc
Q 042677 143 MNGKVSLMNPN----------------TTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSY----TNK 202 (504)
Q Consensus 143 iNG~~~~~~~~----------------~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~----~~p 202 (504)
|||+.+..... ......+.++.|++++++++|......|+||||||.|+|++.+|.. ..|
T Consensus 342 iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p 421 (503)
T 1hfu_A 342 INGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNP 421 (503)
T ss_dssp ETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSB
T ss_pred ECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCC
Confidence 99998742110 0123578999999999999964444568999999999999999975 258
Q ss_pred eeeceEEE-cCCcEEEEEEEecCCCceeEEEEecc
Q 042677 203 IKLDSLDV-HVGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 203 ~~~d~v~l-~~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
...|++.| .+|+++.+.++++ +||.|.+||+..
T Consensus 422 ~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil 455 (503)
T 1hfu_A 422 VKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIE 455 (503)
T ss_dssp CEESEEECCSTTCEEEEEEECC-SCEEEEEEESSH
T ss_pred CeeeeEEecCCCceEEEEEEcC-CCeeeeEecCch
Confidence 88999999 7999999999998 799999999964
No 57
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.61 E-value=2.7e-14 Score=150.48 Aligned_cols=224 Identities=13% Similarity=0.192 Sum_probs=147.1
Q ss_pred CeEEEcCCCeEEEEEEeCC-CCCeeeeeCCcCCCCCCCCCCCcc----c-CCcCCCCCeEEEEEEeCCCceeeeeecchh
Q 042677 5 PLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG----T-NCPIQPGTNWTYVFQTKDQIGSFFYFPSIN 78 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~~~~~~~~~DG~~~----~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~ 78 (504)
|+|+|++|+++++||.|.. .....+|++|..+.. ...||.+. + ...|.|||+++..++++..+|.||.+++..
T Consensus 212 ~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 212 AVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTV-IEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPS 290 (521)
T ss_dssp CEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred eEEEECCCCEEEEEEEecCCcccEEEEECCCeEEE-EecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccc
Confidence 8999999999999999998 457899999987653 35899753 3 566999999999999754579999998754
Q ss_pred h---hhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccH------H-----HHHHHHhccccCCCCCCCeEEEc
Q 042677 79 F---QKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESY------K-----EIRSKMKKMQWAYFNPPDWMLMN 144 (504)
Q Consensus 79 ~---~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~------~-----~~~~~~~~~~~~~~~~~~~~liN 144 (504)
. ....|+..+++.........+..... . ...+.+...... . .....+... .+.......|+||
T Consensus 291 ~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~-~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~l~-~~~~~~~~~~~iN 367 (521)
T 1v10_A 291 NGRNGFTGGINSAIFRYQGAAVAEPTTSQN-S-GTALNEANLIPLINPGAPGNPVPGGADINLNLR-IGRNATTADFTIN 367 (521)
T ss_dssp SSSCSCGGGTTEEEEEETTCCSCCCCCCCC-C-SCBCCGGGCCBSSCCCCSSCSSTTCSSEEEECC-EECCSSSSCCEES
T ss_pred cccccCCCCceeEEEEECCCCCCCCCCCCC-c-ccccchhhcccCCcccCCCcccCCcceEEEEEE-EecCCceeEEEEC
Confidence 1 12233433455443221111110000 0 000000000000 0 000000000 0000011258899
Q ss_pred cccCCCCCC----------------CCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCc----cccee
Q 042677 145 GKVSLMNPN----------------TTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSY----TNKIK 204 (504)
Q Consensus 145 G~~~~~~~~----------------~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~----~~p~~ 204 (504)
|+.+..... ....+.+.++.|++++++++| ...|+||||||.|+|++.+|.. ..|..
T Consensus 368 g~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~ 444 (521)
T 1v10_A 368 GAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGHNFDVVRTPGSSVYNYVNPVR 444 (521)
T ss_dssp SCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSCCEEEEECTTCSCCCCSSCCE
T ss_pred CCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccceEEEEecCCCCccccCCCCe
Confidence 998742110 012467899999999999999 3468999999999999999875 35888
Q ss_pred eceEEE-cCCcEEEEEEEecCCCceeEEEEecc
Q 042677 205 LDSLDV-HVGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 205 ~d~v~l-~~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
.|++.| .+|+++.+.++++ +||.|.+||+-.
T Consensus 445 rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~ 476 (521)
T 1v10_A 445 RDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHID 476 (521)
T ss_dssp ESEEECCBSSCEEEEEEECC-SCEEEEEEESCH
T ss_pred eeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChH
Confidence 999999 7999999999998 799999999964
No 58
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.52 E-value=6.4e-13 Score=138.65 Aligned_cols=230 Identities=12% Similarity=0.152 Sum_probs=146.0
Q ss_pred CCeEEEcCCCeEEEEEEeCC-CCCeeeeeCCcCCCCCCCCCCCcc----c-CCcCCCCCeEEEEEEeCCCceeeeeecch
Q 042677 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG----T-NCPIQPGTNWTYVFQTKDQIGSFFYFPSI 77 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~~~~~~~~~DG~~~----~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~ 77 (504)
-|.|+|++|+++++||.|.. .....+|++|..+.. ...||.+. + ...|.|||+++..+++...+|.||..+..
T Consensus 188 ~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 266 (495)
T 3t6v_A 188 LSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTI-IETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANP 266 (495)
T ss_dssp CCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred ceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEec
Confidence 47899999999999999987 567899999987653 35899853 2 45699999999999975446999999764
Q ss_pred h---hhhhCCccccEEEeCCCCcCCCCCCCCc-ceeEEeeeeecccHHH-------HHHHHhccccCCC-CCCCeEEEcc
Q 042677 78 N---FQKAGGGFGPIRINNRIAINVPFPKPEA-EFDLLIGDWYQESYKE-------IRSKMKKMQWAYF-NPPDWMLMNG 145 (504)
Q Consensus 78 ~---~~~~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~l~d~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~liNG 145 (504)
. .....|...+++.+.......|...... .. ..+.+........ .....+....-.. .....|+|||
T Consensus 267 ~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~~~~w~iNg 345 (495)
T 3t6v_A 267 NSGGEGFDGGINSAILRYDGATTADPVTVASTVHT-KCLIETDLHPLSRNGVPGNPHQGGADCNLNLSLGFACGNFVING 345 (495)
T ss_dssp SSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS-SBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEETTEEEETT
T ss_pred ccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc-cccccccccccccccCCCccCCCCCcEEEEEEEEecCcEEEEcC
Confidence 2 1112223234454442221111100000 00 0000000000000 0000000000000 0012689999
Q ss_pred ccCCCCCC----------------CCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc----cceee
Q 042677 146 KVSLMNPN----------------TTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT----NKIKL 205 (504)
Q Consensus 146 ~~~~~~~~----------------~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~----~p~~~ 205 (504)
+.+..-.. ....+.+.++.|++++|.|.|......|+||+|||.|+|++.+|... .|...
T Consensus 346 ~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g~~~~n~~~P~~r 425 (495)
T 3t6v_A 346 VSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESASNSTSNYDDPIWR 425 (495)
T ss_dssp BCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTTCCCCCSSSCCEE
T ss_pred EecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCCCCCcccCCCCCc
Confidence 88642110 01235689999999999998433445689999999999999988653 58889
Q ss_pred ceEEEcC-CcEEEEEEEecCCCceeEEEEecc
Q 042677 206 DSLDVHV-GQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 206 d~v~l~~-geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
|++.|.+ |+.+.+.++++ +||.|.+||+..
T Consensus 426 Dtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~ 456 (495)
T 3t6v_A 426 DVVSIGGVGDNVTIRFCTD-NPGPWFLHCHID 456 (495)
T ss_dssp SEEECCSTTCEEEEEEECC-SCEEEEEEESCH
T ss_pred cEEEcCCCCcEEEEEEEcC-CCeeEEEEecch
Confidence 9999997 99999999998 799999999853
No 59
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.46 E-value=2.6e-12 Score=134.10 Aligned_cols=231 Identities=12% Similarity=0.180 Sum_probs=144.7
Q ss_pred CCCeEEEcCCCeEEEEEEeCC-CCCeeeeeCCcCCCCCCCCCCCcc----c-CCcCCCCCeEEEEEEeCCCceeeeeecc
Q 042677 3 PGPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG----T-NCPIQPGTNWTYVFQTKDQIGSFFYFPS 76 (504)
Q Consensus 3 PgP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~~~~~~~~~DG~~~----~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H 76 (504)
+-|.|+|++|+++++||.|.. .....+|++|..+.. ...||.+. + ...|.|||+++..+++...+|.||..+.
T Consensus 184 ~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-ia~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~ 262 (499)
T 3pxl_A 184 ELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTI-IEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRAN 262 (499)
T ss_dssp CCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEE
T ss_pred CcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEE-EEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEe
Confidence 347999999999999999987 567899999987654 45899853 2 4569999999999997545699999876
Q ss_pred hh--h-hhhCCccccEEEeCCCCcCCCCCCCCcceeEEeeeeecccHH-------HHHHHHhccc-cCCCCCCCeEEEcc
Q 042677 77 IN--F-QKAGGGFGPIRINNRIAINVPFPKPEAEFDLLIGDWYQESYK-------EIRSKMKKMQ-WAYFNPPDWMLMNG 145 (504)
Q Consensus 77 ~~--~-~~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~liNG 145 (504)
.. . ....|..-+++.+.......+........ ..+.+....... ......+... .........|+|||
T Consensus 263 ~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~~~~w~iNg 341 (499)
T 3pxl_A 263 PNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFNGSNFFING 341 (499)
T ss_dssp ESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEECSSCEEETT
T ss_pred cccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCcEEEEEEEEecCcEEEEcC
Confidence 42 1 11122222344443222111110000000 000000000000 0000000000 00000112688999
Q ss_pred ccCCCCC---------C-------CCCcceEEEecCCEEEEEEEecC--CCeeEEEEEcCceeeEeecCCCcc----cce
Q 042677 146 KVSLMNP---------N-------TTEHESFTVTKGKTYRFRISNVG--TAWSFNFRIQNHRMVLVETEGSYT----NKI 203 (504)
Q Consensus 146 ~~~~~~~---------~-------~~~~p~~~v~~G~~~rlRliNa~--~~~~~~~~i~gh~~~via~DG~~~----~p~ 203 (504)
+.+..-. + ....+.+.++.|++++|.|.|.+ ....|+||+|||.|+|++.+|... .|.
T Consensus 342 ~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g~~~~n~~~P~ 421 (499)
T 3pxl_A 342 ASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTVYNYDNPI 421 (499)
T ss_dssp BCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTCCCCCSSSCC
T ss_pred EecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccCCcccccCCCC
Confidence 8864210 0 11235789999999999999422 234689999999999999888643 588
Q ss_pred eeceEEEcC---CcEEEEEEEecCCCceeEEEEecc
Q 042677 204 KLDSLDVHV---GQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 204 ~~d~v~l~~---geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
..|++.|.+ |+.+.+.++++ +||.|.+||+..
T Consensus 422 ~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~ 456 (499)
T 3pxl_A 422 FRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHID 456 (499)
T ss_dssp EESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSH
T ss_pred ccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCCh
Confidence 899999986 99999999998 799999999853
No 60
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.45 E-value=2.2e-12 Score=137.03 Aligned_cols=224 Identities=11% Similarity=0.125 Sum_probs=140.9
Q ss_pred CeEEEcCCCeEEEEEEeCC-CCCeeeeeCCcCCCCCCCCCCCcc----c-CCcCCCCCeEEEEEEe-CCCceeeeeecch
Q 042677 5 PLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG----T-NCPIQPGTNWTYVFQT-KDQIGSFFYFPSI 77 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~~~~~~~~~DG~~~----~-~~~i~pg~~~~y~~~~-~~~~Gt~wYH~H~ 77 (504)
++|+|++|+++++||.|.. .....+|++|..+.. .+.||.+. + ...|.|||+++..+++ ...+|.||-+++.
T Consensus 204 ~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~ 282 (552)
T 1aoz_A 204 YIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLV-VEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGT 282 (552)
T ss_dssp CCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEE
T ss_pred eEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEE-EEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEc
Confidence 4899999999999999997 456789999987653 35899743 3 5669999999999997 3448999999886
Q ss_pred hhhhhCCccc-cEEEeCCCCc-CCCCCCCCcceeEEeeeeecccHHHHHHHHhc-c---c----------------cCCC
Q 042677 78 NFQKAGGGFG-PIRINNRIAI-NVPFPKPEAEFDLLIGDWYQESYKEIRSKMKK-M---Q----------------WAYF 135 (504)
Q Consensus 78 ~~~~~~Gl~G-~liV~~~~~~-~~~~~~~~~e~~l~l~d~~~~~~~~~~~~~~~-~---~----------------~~~~ 135 (504)
..-......+ +++.+..... ..+... .... ..|. +........+.. . . .+..
T Consensus 283 ~~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~----p~~~-~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 356 (552)
T 1aoz_A 283 RARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQT----PAWD-DFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVI 356 (552)
T ss_dssp ESSCCCSCCEEEEEEETTSCTTSCCSSC-CCCC----CCTT-CHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEE
T ss_pred ccCCCCCccEEEEEEECCCCCCCCCCCC-CCCC----Cccc-cccccccccccccccCCCCCCCCCCcEEEEEEEeeccC
Confidence 4210111122 2222221111 101000 0000 0000 000000000000 0 0 0000
Q ss_pred CCCCeEEEccccCCCCC--------------------C------------------CCCcceEEEecCCEEEEEEEecCC
Q 042677 136 NPPDWMLMNGKVSLMNP--------------------N------------------TTEHESFTVTKGKTYRFRISNVGT 177 (504)
Q Consensus 136 ~~~~~~liNG~~~~~~~--------------------~------------------~~~~p~~~v~~G~~~rlRliNa~~ 177 (504)
.....|.|||+.+.... . ......+.++.|++++|.|.|.+.
T Consensus 357 ~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~ 436 (552)
T 1aoz_A 357 NGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANM 436 (552)
T ss_dssp TTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCC
T ss_pred CCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcc
Confidence 01124788887652100 0 001245899999999999999875
Q ss_pred -----CeeEEEEEcCceeeEeecC-CCc----------ccceeeceEEEcCCcEEEEEEEecCCCceeEEEEecc
Q 042677 178 -----AWSFNFRIQNHRMVLVETE-GSY----------TNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 178 -----~~~~~~~i~gh~~~via~D-G~~----------~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
...|+||||||.|+|++.. |.+ ..|...|++.|.+|+.+.|.++++ +||.|.+||+-.
T Consensus 437 ~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~HCHi~ 510 (552)
T 1aoz_A 437 MKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAFHCHIE 510 (552)
T ss_dssp SSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEEEESSH
T ss_pred cccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEEEeeeh
Confidence 3469999999999999984 553 247789999999999999999998 799999999964
No 61
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.45 E-value=7.4e-12 Score=132.14 Aligned_cols=229 Identities=15% Similarity=0.211 Sum_probs=142.5
Q ss_pred CCeEEEcCCCeEEEEEEeCC-CCCeeeeeCCcCCCCCCCCCCCcc----c-CCcCCCCCeEEEEEEeCCC-ceeeeeecc
Q 042677 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG----T-NCPIQPGTNWTYVFQTKDQ-IGSFFYFPS 76 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~~~~~~~~~DG~~~----~-~~~i~pg~~~~y~~~~~~~-~Gt~wYH~H 76 (504)
.|+|+|++|+++++||.|.. .....+|++|..+.. ...||.+. + ...|.|||+++..+++..+ .|.||....
T Consensus 177 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~ 255 (534)
T 1zpu_A 177 NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTV-VEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQK 255 (534)
T ss_dssp SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEE
T ss_pred ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEE-EeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEe
Confidence 48999999999999999998 567889999987654 35899853 2 5569999999999997433 578999876
Q ss_pred hhhhhhC------Cccc-cEEEeCCCCcCCCCCCCCcceeEEeeeeecccH--HHH----H-H-HHhccccCCCCCCCeE
Q 042677 77 INFQKAG------GGFG-PIRINNRIAINVPFPKPEAEFDLLIGDWYQESY--KEI----R-S-KMKKMQWAYFNPPDWM 141 (504)
Q Consensus 77 ~~~~~~~------Gl~G-~liV~~~~~~~~~~~~~~~e~~l~l~d~~~~~~--~~~----~-~-~~~~~~~~~~~~~~~~ 141 (504)
......+ ...+ +++.+.... ..+......++...+.+...... ..+ . . .+.............+
T Consensus 256 ~~~~~~~~~~~~~~~~~~ail~y~~~~-~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 334 (534)
T 1zpu_A 256 FDDTMLDVIPSDLQLNATSYMVYNKTA-ALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVMDNLKNGVNYA 334 (534)
T ss_dssp ECGGGSSSCCTTCCCEEEEEEESCTTS-CBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEEEECTTSCEEE
T ss_pred ccccccccCCCCCCcceEEEEEeCCCC-CCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEeeccCCceeEE
Confidence 5422110 1111 223232111 11100000000000000000000 000 0 0 0000000000011368
Q ss_pred EEccccCCCCCC-------------------CCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCC----
Q 042677 142 LMNGKVSLMNPN-------------------TTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGS---- 198 (504)
Q Consensus 142 liNG~~~~~~~~-------------------~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~---- 198 (504)
+|||+.+..... ......+.++.|++++|.|.|.+.. .|+||||||.|+|++.++.
T Consensus 335 ~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~-~HP~HLHGh~F~Vl~~~~~~~~~ 413 (534)
T 1zpu_A 335 FFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTG-THPFHLHGHAFQTIQRDRTYDDA 413 (534)
T ss_dssp EETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEECCCCCGG
T ss_pred EECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCC-CCCeEecCCceEEEeecCCcccc
Confidence 899997632100 0013468999999999999998764 5899999999999998853
Q ss_pred -------c---------ccceeeceEEEcCCcEEEEEEEecCCCceeEEEEecc
Q 042677 199 -------Y---------TNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 199 -------~---------~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
+ ..|...|++.|.+|+.+.|.++++ +||.|.+||+-.
T Consensus 414 ~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~ 466 (534)
T 1zpu_A 414 LGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIE 466 (534)
T ss_dssp GTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCH
T ss_pred ccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCch
Confidence 1 246789999999999999999998 799999999954
No 62
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.43 E-value=2.9e-12 Score=132.92 Aligned_cols=215 Identities=13% Similarity=0.183 Sum_probs=141.2
Q ss_pred CCeEEEcCCCeEEEEEEeCC-CCCeeeeeCCcCCCCCCCCCCC----cc-c-CCcCCCCCeEEEEEEeCCCceeeeeecc
Q 042677 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGV----SG-T-NCPIQPGTNWTYVFQTKDQIGSFFYFPS 76 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~~~~~~~~~DG~----~~-~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H 76 (504)
.|+|.|++|+ ++||.|.. .....+|++|..+.. .+.||. |. + ...|.|||+++..+++ .+.|+|-.-++
T Consensus 221 ~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~v-Ia~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~ 296 (481)
T 3zx1_A 221 KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFIL-VGTDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESA 296 (481)
T ss_dssp SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEE-EEETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEEC
T ss_pred CceEEecCCC--EEEEEecCCCeEEEEEECCCceEE-EEcCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEe
Confidence 5799999999 99999998 677899999987553 468974 22 2 5669999999999997 46777766554
Q ss_pred hhhhhhCCcc-----cc-----EEEeCCCCcCCC--------CCCCCcceeEEeeeeecccHHHHHHHHhccccCC-CCC
Q 042677 77 INFQKAGGGF-----GP-----IRINNRIAINVP--------FPKPEAEFDLLIGDWYQESYKEIRSKMKKMQWAY-FNP 137 (504)
Q Consensus 77 ~~~~~~~Gl~-----G~-----liV~~~~~~~~~--------~~~~~~e~~l~l~d~~~~~~~~~~~~~~~~~~~~-~~~ 137 (504)
.... .|+. .. +-+.. .....| .+..+.+..+.|+....+- ..+...+..+. ...
T Consensus 297 ~~~~--~g~~~~~~~~~~~~~~~~~~~-~~~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~----~~~~~~~~~~~~~~~ 369 (481)
T 3zx1_A 297 YYDR--DKMMVKEEPNTLFLANINLKK-ENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQM----HGMMGKSEGELKIAL 369 (481)
T ss_dssp CCCC--CCSSCCCCCCCEEEEEEEEEC-CCCCCCSCSCCCCCCCCCCEEEEEEEEECCSTT----TTGGGCCHHHHHHHH
T ss_pred cccc--cCccccCCCCceeEEEEecCC-CCccCCccccCCCCCCCCCcEEEEEEeccchhc----ccccccccccccccc
Confidence 3211 1111 01 11211 011111 1111222233333211000 00000000000 000
Q ss_pred CCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeec--CCCccc---ceeeceEEEcC
Q 042677 138 PDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVET--EGSYTN---KIKLDSLDVHV 212 (504)
Q Consensus 138 ~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~--DG~~~~---p~~~d~v~l~~ 212 (504)
...++|||+.+.. ..+.+.++.|++++|+|+|.+.. .|+||||||.|+|++. +|.... +...|+|.|.|
T Consensus 370 ~~~~~iNG~~~~~-----~~~~~~~~~G~~v~w~l~N~~~~-~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~P 443 (481)
T 3zx1_A 370 ASMFLINRKSYDL-----KRIDLSSKLGVVEDWIVINKSHM-DHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRP 443 (481)
T ss_dssp HTTEEETTBCCCT-----TCCCEEEETTCCEEEEEEECSSS-CEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECT
T ss_pred cceeEECCEeCCC-----CCceEEeCCCCEEEEEEEcCCCC-ceeEEEeccEEEEEEecccCCCCCcccCcccceEEECC
Confidence 1259999998732 13679999999999999997654 5899999999999999 997653 56799999999
Q ss_pred CcEEEEEEEecCCCceeEEEEecc
Q 042677 213 GQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 213 geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
|+++.|.++++ ++|.|.++|+..
T Consensus 444 g~~~~i~~~~d-~pG~w~~HCHil 466 (481)
T 3zx1_A 444 NEELRLRMKQD-FKGLRMYHCHIL 466 (481)
T ss_dssp TCEEEEEECCC-SCEEEEEEESSH
T ss_pred CCEEEEEEEcC-CCeeEEEEcCCh
Confidence 99999999997 799999999854
No 63
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.42 E-value=1.6e-11 Score=130.29 Aligned_cols=231 Identities=9% Similarity=0.046 Sum_probs=141.3
Q ss_pred CCeEEEcCCCeEEEEEEeCC-CCCeeeeeCCcCCCCCCCCCCCcc----c-CCcCCCCCeEEEEEEeCCCceeeeeecch
Q 042677 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG----T-NCPIQPGTNWTYVFQTKDQIGSFFYFPSI 77 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~~~~~~~~~DG~~~----~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~ 77 (504)
-|+|+|++|+++++||.|.. .....+|++|..+.. ...||.+. + ...|.|||+++..++++..+|.||.....
T Consensus 214 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~v-i~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~ 292 (559)
T 2q9o_A 214 YANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV-IAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTF 292 (559)
T ss_dssp CCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEE-EEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEEC
T ss_pred ceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEE-EecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEe
Confidence 37899999999999999998 456899999987653 35899863 3 56699999999999985557899988765
Q ss_pred --hhhh---hCCccccEEEeCCCCcCCCCCC----CCccee--EEeeeeeccc--HHHHH----HHHhccccCCCCCCCe
Q 042677 78 --NFQK---AGGGFGPIRINNRIAINVPFPK----PEAEFD--LLIGDWYQES--YKEIR----SKMKKMQWAYFNPPDW 140 (504)
Q Consensus 78 --~~~~---~~Gl~G~liV~~~~~~~~~~~~----~~~e~~--l~l~d~~~~~--~~~~~----~~~~~~~~~~~~~~~~ 140 (504)
.... ......+++.........|... .+.... ..+....... ...+. ..+.............
T Consensus 293 ~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (559)
T 2q9o_A 293 GGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDLTGTPLFV 372 (559)
T ss_dssp CGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCCCGGGEEEEEEECSSSSSCE
T ss_pred ccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCcccccceeEEEEEEeecCCCceEE
Confidence 2110 1111122333322111111100 000000 0000000000 00000 0000000000011237
Q ss_pred EEEccccCCCCCCC--------------CCcceEEEecCCEEEEEEEecCC----CeeEEEEEcCceeeEeecCC-----
Q 042677 141 MLMNGKVSLMNPNT--------------TEHESFTVTKGKTYRFRISNVGT----AWSFNFRIQNHRMVLVETEG----- 197 (504)
Q Consensus 141 ~liNG~~~~~~~~~--------------~~~p~~~v~~G~~~rlRliNa~~----~~~~~~~i~gh~~~via~DG----- 197 (504)
|+|||+.+...... .....+.+..++.+++.++|... ...|+||||||.|+|++.++
T Consensus 373 ~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~ 452 (559)
T 2q9o_A 373 WKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAA 452 (559)
T ss_dssp EEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTT
T ss_pred EEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccc
Confidence 99999987421110 01235788887778777776644 56799999999999999986
Q ss_pred ----Ccc------------cceeeceEEEcCCcEEEEEEEecCCCceeEEEEecc
Q 042677 198 ----SYT------------NKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 198 ----~~~------------~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
+.. .|...|++.|.+|+++.+.++++ +||.|.+||+-.
T Consensus 453 ~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil 506 (559)
T 2q9o_A 453 SQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIA 506 (559)
T ss_dssp SCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCH
T ss_pred cccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecch
Confidence 321 36689999999999999999988 799999999964
No 64
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.39 E-value=5.2e-13 Score=117.04 Aligned_cols=87 Identities=18% Similarity=0.246 Sum_probs=66.1
Q ss_pred CCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCC------CCccc--CCcCCCCC--eEEEEEEeCCCceee
Q 042677 2 FPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQD------GVSGT--NCPIQPGT--NWTYVFQTKDQIGSF 71 (504)
Q Consensus 2 ~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~D------G~~~~--~~~i~pg~--~~~y~~~~~~~~Gt~ 71 (504)
.|+|+|+|++||+|+|+++|... ...|.+.+...+..+.+ ..+.. ...|.||+ +++|.|++ ++|+|
T Consensus 58 ~~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~--~pGtY 133 (154)
T 2cal_A 58 KKNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP--TAGTY 133 (154)
T ss_dssp EESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC--CSEEE
T ss_pred CCCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE--CCceE
Confidence 35799999999999999999743 34666666544433322 11111 12689999 99999994 89999
Q ss_pred eeecchhhhhhCCccccEEEe
Q 042677 72 FYFPSINFQKAGGGFGPIRIN 92 (504)
Q Consensus 72 wYH~H~~~~~~~Gl~G~liV~ 92 (504)
|||||...|..+||+|.|+|+
T Consensus 134 ~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 134 YYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECCSTTTGGGTCEEEEEEC
T ss_pred EEECCCCCHHHCCCEEEEEEC
Confidence 999999889999999999984
No 65
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.38 E-value=1.1e-11 Score=128.45 Aligned_cols=222 Identities=17% Similarity=0.172 Sum_probs=138.8
Q ss_pred CCeEEEcCCCeEEEEEEeCC-CCCeeeee-CCcCCCCCCCCCCCc----c-c-CCcCCCCCeEEEEEEeCCCceeeeeec
Q 042677 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTW-NGIQQRLNSWQDGVS----G-T-NCPIQPGTNWTYVFQTKDQIGSFFYFP 75 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l-~~~~siH~-HG~~~~~~~~~DG~~----~-~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~ 75 (504)
.|.+.+ +|+++++||.|.. .....+++ +|..+.. ...||.+ . + ...|.|||+++..+++ .+.++|+.-+
T Consensus 193 ~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v-Ia~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~ 269 (488)
T 3od3_A 193 YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV-IASDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVT 269 (488)
T ss_dssp SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEE
T ss_pred CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE-EEeCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEE
Confidence 366665 6789999999997 56788888 6875443 4589963 2 2 5669999999999998 4567776654
Q ss_pred chhhhhhCCc-----cc---cEEEeCC---CCcCCCC-----C---C----CCcceeEEeeeee-cccHHHHHHHHhccc
Q 042677 76 SINFQKAGGG-----FG---PIRINNR---IAINVPF-----P---K----PEAEFDLLIGDWY-QESYKEIRSKMKKMQ 131 (504)
Q Consensus 76 H~~~~~~~Gl-----~G---~liV~~~---~~~~~~~-----~---~----~~~e~~l~l~d~~-~~~~~~~~~~~~~~~ 131 (504)
..... .|+ .. .+-|.+. .....|. + . ..+++.+.+.... ......+.+.+..+.
T Consensus 270 ~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~ 347 (488)
T 3od3_A 270 LPVSQ--MGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQA 347 (488)
T ss_dssp CCCSS--TTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGG
T ss_pred eccCC--CCcccccccCccceeEecccccCCCCCCCcccccCCCCcccccccceEEEEEecccccccccccccccccccc
Confidence 32111 111 11 1222220 1111110 0 0 1122233332100 000001111000000
Q ss_pred --------------cCCC---------CCCCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCc
Q 042677 132 --------------WAYF---------NPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNH 188 (504)
Q Consensus 132 --------------~~~~---------~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh 188 (504)
.|.+ .+...|+|||+.+.. ..+.++++.|+++||+|+|.+....|+||||||
T Consensus 348 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~~-----~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~ 422 (488)
T 3od3_A 348 MAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDM-----NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT 422 (488)
T ss_dssp GTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCCT-----TCCSEECCBSSCEEEEEECTTCCCCEEEEETTC
T ss_pred cccccccccccccccCccccccccccccccceeeECCeeCCC-----CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCc
Confidence 0100 011248999999742 126689999999999999999666789999999
Q ss_pred eeeEeecCCCcccc---eeeceEEEcCCcEEEEEEEecC---CCceeEEEEecc
Q 042677 189 RMVLVETEGSYTNK---IKLDSLDVHVGQSYSVLVTADK---NPADYYIVASPK 236 (504)
Q Consensus 189 ~~~via~DG~~~~p---~~~d~v~l~~geR~dv~v~~~~---~~g~y~i~~~~~ 236 (504)
.|+|++.||....+ ...|+|.|. |+++.|.+++++ ++|.|.++|+..
T Consensus 423 ~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 423 QFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp CBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSH
T ss_pred eEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCch
Confidence 99999999987654 468999999 999999999974 367999999854
No 66
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.33 E-value=2.5e-11 Score=125.44 Aligned_cols=201 Identities=11% Similarity=0.072 Sum_probs=134.4
Q ss_pred CCCeEEEcCCCeEEEEEEeCC-CCCeeeee--CC---cCCCCCCCCCCCcc-----c-CCcCCCCCeEEEEEEeCCCcee
Q 042677 3 PGPLINCSTDDMIHVNVFNKM-DEPLLFTW--NG---IQQRLNSWQDGVSG-----T-NCPIQPGTNWTYVFQTKDQIGS 70 (504)
Q Consensus 3 PgP~i~~~~Gd~v~i~v~N~l-~~~~siH~--HG---~~~~~~~~~DG~~~-----~-~~~i~pg~~~~y~~~~~~~~Gt 70 (504)
+.|+|+|++| ++++||.|.. .....+|+ +| ..+.. ...||.+. + ...|.|||+++..++++ .|.
T Consensus 178 ~~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~--~~~ 253 (448)
T 3aw5_A 178 KDAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRL-IAVDQGFLARPIEVRALFLAPAERAEVVVELG--EGV 253 (448)
T ss_dssp ETCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEE-EEETTEEEEEEEEESCEEECTTCEEEEEEEEC--SEE
T ss_pred ccceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEE-EEeCCCccCCceEeceEEECCcceEEEEEECC--CCc
Confidence 3589999999 9999999998 56789999 88 55443 35899742 2 45689999999999974 478
Q ss_pred eeeecchhhhhhC---Cc----------ccc--EEEeCCCCcCCC--CCC-------CCcceeEEeeeeecccHHHHHHH
Q 042677 71 FFYFPSINFQKAG---GG----------FGP--IRINNRIAINVP--FPK-------PEAEFDLLIGDWYQESYKEIRSK 126 (504)
Q Consensus 71 ~wYH~H~~~~~~~---Gl----------~G~--liV~~~~~~~~~--~~~-------~~~e~~l~l~d~~~~~~~~~~~~ 126 (504)
||..++....... |+ ... |.+......+.| ... ...+..+.|..
T Consensus 254 y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~~------------ 321 (448)
T 3aw5_A 254 YLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALSL------------ 321 (448)
T ss_dssp EEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEEE------------
T ss_pred eEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEeC------------
Confidence 8988764211000 01 111 112111110000 000 00001111100
Q ss_pred HhccccCCCCCCCeEEEccccCCCCCCCCCcceEE-EecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc-----
Q 042677 127 MKKMQWAYFNPPDWMLMNGKVSLMNPNTTEHESFT-VTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT----- 200 (504)
Q Consensus 127 ~~~~~~~~~~~~~~~liNG~~~~~~~~~~~~p~~~-v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~----- 200 (504)
+ ...|+|||+.+.. ..+.+. ++.|++++|+|.|.+....|+||||||.|+|++.+|...
T Consensus 322 ------~----~~~~~iNg~~~~~-----~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~ 386 (448)
T 3aw5_A 322 ------S----GMQWTINGMFWNA-----SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAEL 386 (448)
T ss_dssp ------E----TTEEEETTBCCCT-----TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTT
T ss_pred ------C----CceeeECCCcCCC-----CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccc
Confidence 0 0258999998742 124567 999999999999998445689999999999999999764
Q ss_pred -------cc---eeeceEEEcCCcEEEEEEEec---C-CCceeEEEEecc
Q 042677 201 -------NK---IKLDSLDVHVGQSYSVLVTAD---K-NPADYYIVASPK 236 (504)
Q Consensus 201 -------~p---~~~d~v~l~~geR~dv~v~~~---~-~~g~y~i~~~~~ 236 (504)
.| ...|++.+.+|+++.+.+++. . +| |.+||+..
T Consensus 387 ~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil 434 (448)
T 3aw5_A 387 AVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNL 434 (448)
T ss_dssp CCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSH
T ss_pred cccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCCh
Confidence 23 578999999999999996664 2 45 99999854
No 67
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.26 E-value=1e-10 Score=124.42 Aligned_cols=224 Identities=9% Similarity=0.020 Sum_probs=137.4
Q ss_pred CCeEEEcCCCeEEEEEEeCC-CCCeeeeeCCc-------CCCCCCCCCCCcc----c-C-------CcCCCCCeEEEEEE
Q 042677 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGI-------QQRLNSWQDGVSG----T-N-------CPIQPGTNWTYVFQ 63 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~-------~~~~~~~~DG~~~----~-~-------~~i~pg~~~~y~~~ 63 (504)
.|.+.|++| ++++||.|.. .....+++.|. .+. ....||.+. . + ..|.|||+++..++
T Consensus 264 ~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~-vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd 341 (612)
T 2g23_A 264 WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVH-QIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVD 341 (612)
T ss_dssp SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEE-EEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEE
T ss_pred CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEE-EEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEE
Confidence 589999999 9999999998 57788998776 222 235899743 2 3 35899999999999
Q ss_pred eCCCcee-eeeecchhhhh------hCC----ccccEEEeCCC-CcC--CCCCC------CCcc-----eeEEee-----
Q 042677 64 TKDQIGS-FFYFPSINFQK------AGG----GFGPIRINNRI-AIN--VPFPK------PEAE-----FDLLIG----- 113 (504)
Q Consensus 64 ~~~~~Gt-~wYH~H~~~~~------~~G----l~G~liV~~~~-~~~--~~~~~------~~~e-----~~l~l~----- 113 (504)
+...+|+ ++...-..... .+| ..--|.|..+. .+. .|... ...+ ..+++.
T Consensus 342 ~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~~r~~~~~~~~~~ 421 (612)
T 2g23_A 342 FRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLIVLTPPGTK 421 (612)
T ss_dssp CTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEEEECCTTCT
T ss_pred CCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccceeEEeecccccc
Confidence 8554675 55544321100 001 11114554432 111 11100 0000 111110
Q ss_pred -------eeecccHHHHHH-HHh-cc---ccCCCCCCCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeE
Q 042677 114 -------DWYQESYKEIRS-KMK-KM---QWAYFNPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSF 181 (504)
Q Consensus 114 -------d~~~~~~~~~~~-~~~-~~---~~~~~~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~ 181 (504)
-|.......... .+. .+ ..........++|||+.+.. .+.++++.|++++|+|+|.+.. .|
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~~------~~~~~v~~G~~v~w~l~N~~~~-~H 494 (612)
T 2g23_A 422 GSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFND------GLGFTIGEGTHEQWTFLNLSPI-LH 494 (612)
T ss_dssp TSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTTS------CCCEEEETTCEEEEEEEECSSS-CE
T ss_pred ccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCCC------CCceEecCCCEEEEEEEeCCCC-CC
Confidence 011000000000 000 00 00000111358899998743 3789999999999999999865 58
Q ss_pred EEEEcCceeeEeecCCC------------------------cc---cceeeceEEEcCCcEEEEEEEecCCCceeEEEEe
Q 042677 182 NFRIQNHRMVLVETEGS------------------------YT---NKIKLDSLDVHVGQSYSVLVTADKNPADYYIVAS 234 (504)
Q Consensus 182 ~~~i~gh~~~via~DG~------------------------~~---~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~ 234 (504)
+||||+|.|+|++.+|. .+ ++...|+|.|.||+++.|.++++..+|.|.++|+
T Consensus 495 PiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCH 574 (612)
T 2g23_A 495 PMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCH 574 (612)
T ss_dssp EEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEES
T ss_pred CeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeC
Confidence 99999999999987532 11 1236899999999999999999877999999998
Q ss_pred cc
Q 042677 235 PK 236 (504)
Q Consensus 235 ~~ 236 (504)
..
T Consensus 575 il 576 (612)
T 2g23_A 575 LL 576 (612)
T ss_dssp SH
T ss_pred ch
Confidence 64
No 68
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.24 E-value=1.1e-10 Score=122.69 Aligned_cols=207 Identities=13% Similarity=0.057 Sum_probs=131.9
Q ss_pred CCeEEEcCCCeEEEEEEeCC-CCCeeeeeCCc-CCCCCCCCCCCc----c-c-CCcCCCCCeEEEEEEeCCCceeeeee-
Q 042677 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGI-QQRLNSWQDGVS----G-T-NCPIQPGTNWTYVFQTKDQIGSFFYF- 74 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~-~~~~~~~~DG~~----~-~-~~~i~pg~~~~y~~~~~~~~Gt~wYH- 74 (504)
.|.|.++.| ++++||.|.. .....+|+.|. .+.. .+.||.+ . + ...|.|||+++..++++..+|.++.-
T Consensus 240 ~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~v-ia~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~ 317 (513)
T 2wsd_A 240 WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQ-IGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILA 317 (513)
T ss_dssp SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEE-EEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEE
T ss_pred cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEE-EccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEE
Confidence 478999885 9999999998 45689999887 4443 4589953 2 3 46699999999999975446763321
Q ss_pred cchh--hhhhCCccccEE-EeCCCCcCCC----CCCCCc------------ceeEEeeeeecccHHHHHHHHhccccCCC
Q 042677 75 PSIN--FQKAGGGFGPIR-INNRIAINVP----FPKPEA------------EFDLLIGDWYQESYKEIRSKMKKMQWAYF 135 (504)
Q Consensus 75 ~H~~--~~~~~Gl~G~li-V~~~~~~~~~----~~~~~~------------e~~l~l~d~~~~~~~~~~~~~~~~~~~~~ 135 (504)
.-.. .....+....++ .........+ .+.... +..+.|... ....
T Consensus 318 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~----------------~~~~ 381 (513)
T 2wsd_A 318 NSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT----------------QDEY 381 (513)
T ss_dssp ECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE----------------ECTT
T ss_pred ecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee----------------cCCC
Confidence 1110 000001112222 2211100000 000000 001111100 0000
Q ss_pred CCCCeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCc----------------
Q 042677 136 NPPDWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSY---------------- 199 (504)
Q Consensus 136 ~~~~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~---------------- 199 (504)
. ...++|||+.+.. ...+.++.|++++|+|.|.+.. .|+||||||.|+|++.++..
T Consensus 382 g-~~~~~iNg~~~~~------~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~ 453 (513)
T 2wsd_A 382 G-RPVLLLNNKRWHD------PVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPA 453 (513)
T ss_dssp S-CEEEEETTBCTTS------CCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCC
T ss_pred C-CceEeECCccCCC------cccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcccccccccccccccCCC
Confidence 0 1257899998732 2457899999999999998865 58999999999999987620
Q ss_pred -----ccceeeceEEEcCCcEEEEEEEecCCCceeEEEEecc
Q 042677 200 -----TNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 200 -----~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
-++...|++.|.+|+++.|.++++.++|.|.+||+..
T Consensus 454 ~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil 495 (513)
T 2wsd_A 454 VPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHAL 495 (513)
T ss_dssp BCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred CCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCCh
Confidence 0234789999999999999999965799999999964
No 69
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.23 E-value=2e-11 Score=121.67 Aligned_cols=93 Identities=14% Similarity=0.218 Sum_probs=77.3
Q ss_pred CCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCc-------c-c-CCcCCCCCeEEEEEEe--CCCceee
Q 042677 3 PGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVS-------G-T-NCPIQPGTNWTYVFQT--KDQIGSF 71 (504)
Q Consensus 3 PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~-------~-~-~~~i~pg~~~~y~~~~--~~~~Gt~ 71 (504)
..|.|++++||+|+|+|.|.....+.+|+||..+... .+|.. . . ...|.||++++|.|.+ ++.+|+|
T Consensus 207 ~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w 284 (343)
T 3cg8_A 207 TGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAW 284 (343)
T ss_dssp CCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred CCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeE
Confidence 4689999999999999999988899999999875432 34431 1 2 3568999999999996 3679999
Q ss_pred eeecchhhhhhCCccccEEEeCCCCc
Q 042677 72 FYFPSINFQKAGGGFGPIRINNRIAI 97 (504)
Q Consensus 72 wYH~H~~~~~~~Gl~G~liV~~~~~~ 97 (504)
+||||...+...||.|.|+|.++...
T Consensus 285 ~~HCHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 285 MYHCHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp EEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred EEeCCCHHHHhccCcEEEEEecCCCC
Confidence 99999999999999999999975543
No 70
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.22 E-value=1e-10 Score=123.24 Aligned_cols=221 Identities=13% Similarity=0.079 Sum_probs=132.6
Q ss_pred CCCeEEEcCCCeEEEEEEeCC-CCCeeeeeCC-------cCCCCCCCCCCC----cc-c-CCcCCCCCeEEEEEEeCCCc
Q 042677 3 PGPLINCSTDDMIHVNVFNKM-DEPLLFTWNG-------IQQRLNSWQDGV----SG-T-NCPIQPGTNWTYVFQTKDQI 68 (504)
Q Consensus 3 PgP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG-------~~~~~~~~~DG~----~~-~-~~~i~pg~~~~y~~~~~~~~ 68 (504)
+.|.|.|+.| ++++||.|.. .....++++| ..+. ....||. |. + ...|.|||+++..+.+...+
T Consensus 210 ~~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~-vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~ 287 (534)
T 3abg_A 210 PWPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFK-VIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYA 287 (534)
T ss_dssp ESCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEE-EEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCT
T ss_pred cCceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEE-EEEeCCCcccCceEeceEEECCccEEEEEEEcCCCC
Confidence 3578889885 9999999998 5667899976 3333 2458986 22 3 56799999999999975447
Q ss_pred e-eeeeecchhhhhhCC-------ccccEEEeCCCCcCCCCCCCCcceeEEeeeee-cccHHHHHHHHhccccCCCCCCC
Q 042677 69 G-SFFYFPSINFQKAGG-------GFGPIRINNRIAINVPFPKPEAEFDLLIGDWY-QESYKEIRSKMKKMQWAYFNPPD 139 (504)
Q Consensus 69 G-t~wYH~H~~~~~~~G-------l~G~liV~~~~~~~~~~~~~~~e~~l~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~ 139 (504)
| +||...........| ..+.+-.........+. ....+..|.... ..........+. .+. ...
T Consensus 288 g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~---~~~~P~~L~~~~~p~~~~~~~~~~~---~~~--~~~ 359 (534)
T 3abg_A 288 GKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD---TSVVPANLRDVPFPSPTTNTPRQFR---FGR--TGP 359 (534)
T ss_dssp TSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC---CCCCCCCCCCCSCCCCCCCCCEEEE---CSC--CCS
T ss_pred CceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC---CCCCccccccCCCCCCccccceEEE---Eec--cCc
Confidence 7 587665321000000 11122222111100000 000000000000 000000000000 000 112
Q ss_pred eEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeec-CCC---cc---cceeeceEEEcC
Q 042677 140 WMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVET-EGS---YT---NKIKLDSLDVHV 212 (504)
Q Consensus 140 ~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~-DG~---~~---~p~~~d~v~l~~ 212 (504)
.|+|||+.+.... ....+.++.|++++|.|.|.+....|+||||||.|+|++. +|. .. +....|+|.|.|
T Consensus 360 ~w~iNG~~f~~~~---~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~p 436 (534)
T 3abg_A 360 TWTINGVAFADVQ---NRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGR 436 (534)
T ss_dssp TTCCCCBTTBCTT---SCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCS
T ss_pred eeEECCcccCCCC---CcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCC
Confidence 5789999874211 1124689999999999999986657899999999999998 663 11 124589999999
Q ss_pred CcEEEEEEEecCCCceeEEEEecc
Q 042677 213 GQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 213 geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
|+++.|.+.+..++|.|.+||+..
T Consensus 437 g~~v~I~~~~adnpG~w~~HCHil 460 (534)
T 3abg_A 437 RETVVVEAHYAPFPGVYMFHCHNL 460 (534)
T ss_dssp SEEEEEEEECCSCCEEEEEEESCH
T ss_pred CCEEEEEEEECCCCccEEEecChH
Confidence 999999998333799999999964
No 71
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.19 E-value=1.1e-09 Score=115.75 Aligned_cols=229 Identities=11% Similarity=0.049 Sum_probs=140.3
Q ss_pred CCeEEEcCCCeEEEEEEeCC-CCCeeeeeCCcCCCCCCCCCCCcc----c-CCcCCCCCeEEEEEEeCCCceeeeeecch
Q 042677 4 GPLINCSTDDMIHVNVFNKM-DEPLLFTWNGIQQRLNSWQDGVSG----T-NCPIQPGTNWTYVFQTKDQIGSFFYFPSI 77 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l-~~~~siH~HG~~~~~~~~~DG~~~----~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~ 77 (504)
-++|+|++|+++++||.|.. .....++++|..+.. .+.||.+. + ...|.|||+++..+++...+|.||-....
T Consensus 252 ~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~V-Ia~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~ 330 (580)
T 3sqr_A 252 KFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV-IANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNW 330 (580)
T ss_dssp CCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEE-EEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCC
T ss_pred ceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEE-EEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEec
Confidence 47999999999999999998 456799999987654 35899853 2 45699999999999986568999999765
Q ss_pred hhhh---h-CCccccEEEeCCCCcCCCCCCCCccee-EEeee--eecccH--HHHHHHHhc--c-ccCCCCCCCeEEEcc
Q 042677 78 NFQK---A-GGGFGPIRINNRIAINVPFPKPEAEFD-LLIGD--WYQESY--KEIRSKMKK--M-QWAYFNPPDWMLMNG 145 (504)
Q Consensus 78 ~~~~---~-~Gl~G~liV~~~~~~~~~~~~~~~e~~-l~l~d--~~~~~~--~~~~~~~~~--~-~~~~~~~~~~~liNG 145 (504)
.... . .+..-+++.++......|.... .+.. ..+.+ ...... ..+....+. . ..+. .....|.|||
T Consensus 331 ~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~-~~~~~~~~~~~~~~L~P~~~~~~~~~~~~~~~l~~~~-~~~~~w~iN~ 408 (580)
T 3sqr_A 331 GTTCSTNNEAANATGILRYDSSSIANPTSVG-TTPRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSAF-TNYFTWTINS 408 (580)
T ss_dssp CTTTSCBTTGGGCEEEEESSTTCCCCCCCCC-CCCCCCSCCSCGGGCCBSSCCBCCSEEEEEEEEEEEE-SSSEEEEETT
T ss_pred ccccCccCCCCceEEEEEECCCCCCCCCCCC-CCccchhhcccccccccCCCCCCCCccceEEEEEecc-CCceeEEECC
Confidence 3210 0 1111234444322211111000 0000 00000 000000 000000000 0 0000 0112578999
Q ss_pred ccCCCCC----------CCCC----cceEEEe----cCCEEEEEEEecCC-CeeEEEEEcCceeeEeecCCC--------
Q 042677 146 KVSLMNP----------NTTE----HESFTVT----KGKTYRFRISNVGT-AWSFNFRIQNHRMVLVETEGS-------- 198 (504)
Q Consensus 146 ~~~~~~~----------~~~~----~p~~~v~----~G~~~rlRliNa~~-~~~~~~~i~gh~~~via~DG~-------- 198 (504)
..+.... +... ...+.+. .|+++.|.|-|.+. ...|+||+|||.|+||+.+.+
T Consensus 409 ~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~HLHGh~F~vv~~g~G~f~~~~~~ 488 (580)
T 3sqr_A 409 SSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGFGIWHPIHLHGHDFFIVAQETDVFNSDESP 488 (580)
T ss_dssp BCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSSCCCEEEEESSCCEEEEEEESSCCCTTTSG
T ss_pred EecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCccccceeeEecCceEEEEecCCCccCccccc
Confidence 8763210 1111 1234443 59999999999872 246899999999999998432
Q ss_pred ----cccceeeceEEEcCCcEEEEEEEecCCCceeEEEEecc
Q 042677 199 ----YTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 199 ----~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
+..|...|++.+.+|+.+.+.++++ +||.|.+||+-.
T Consensus 489 ~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~ 529 (580)
T 3sqr_A 489 AKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIA 529 (580)
T ss_dssp GGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSH
T ss_pred cccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcH
Confidence 2247889999999999999999998 799999999854
No 72
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.19 E-value=4.1e-11 Score=98.08 Aligned_cols=75 Identities=12% Similarity=0.175 Sum_probs=61.1
Q ss_pred CCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeeecchhhh
Q 042677 2 FPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQ 80 (504)
Q Consensus 2 ~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~ 80 (504)
|-.++|++++||+|++ +|.+...+++|+++- .||.... +..+.||++++|.| +++|+|||||+.+.
T Consensus 30 F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H~- 96 (105)
T 2ov0_A 30 YETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTPHP- 96 (105)
T ss_dssp ESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT-
T ss_pred EcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC-
Confidence 5578999999999655 699888899998852 3566545 66789999999988 36999999998753
Q ss_pred hhCCccccEEEe
Q 042677 81 KAGGGFGPIRIN 92 (504)
Q Consensus 81 ~~~Gl~G~liV~ 92 (504)
||.|.|+|+
T Consensus 97 ---gM~G~i~V~ 105 (105)
T 2ov0_A 97 ---FMRGKVVVE 105 (105)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 899999984
No 73
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.19 E-value=1.9e-11 Score=105.62 Aligned_cols=93 Identities=14% Similarity=0.058 Sum_probs=71.9
Q ss_pred EEeeeCCcEEEEEEEeCCCC-cceeeecCcceEEEe------eccc---cCCccccCcCCCCCCCcccEEEeCCCcEEEE
Q 042677 377 VATGIHRGWIEIVLKNELEV-IDSWHLDGFGFYTVG------YGIG---DWNPQLRSRYNLYDPVVRSTVQVYPGAWTAV 446 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~-~HP~HlHG~~F~Vv~------~g~g---~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~i 446 (504)
.+.++.|++|+|+|.|.+.+ .|.||+|+..+.+.. ...+ .+.+.. ....++||..|.|++...|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~------~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD------KSNIIAESPLANGNETVEV 109 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC------CTTEEEECCCBCTTCEEEE
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc------cccccccccccCCCCEEEE
Confidence 36789999999999999988 899999986532110 0001 111100 1234789999999999999
Q ss_pred EEEecCceeeeeeeccchhhhhccEEEEEE
Q 042677 447 YAYLDNPGMWNLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 447 rf~adnpG~w~~HCHil~H~~~Gm~~~~~V 476 (504)
.|.+++||.|.||||+..|+. ||+..+.|
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 999999999999999999999 99999987
No 74
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.18 E-value=8.1e-11 Score=96.33 Aligned_cols=85 Identities=12% Similarity=-0.039 Sum_probs=66.4
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEe-cCcee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYL-DNPGM 455 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a-dnpG~ 455 (504)
.+.++.|+.|+| .|.+...|+||+||..|... .|. + . +....++..+.||+...++|.+ +.||.
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~~H~v~~~~~~~~~~---~g~-~---~------~~~~~~~~~i~pG~~~~~~f~~~~~~G~ 84 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLPPHNILFDDKQVPGA---SKE-L---A------DKLSHSQLMFSPGESYEITFSSDFPAGT 84 (105)
T ss_dssp EEEECTTEEEEE--EECSSCCEEEEECTTSSGGG---CHH-H---H------HHHCEEEEECSTTCEEEEEECTTSCSEE
T ss_pred EEEEcCCCEEEE--EECCCCCCeEEEeCCCCCcc---ccc-c---c------ccccccccccCCCCeEEEEEecCCCCee
Confidence 478899999876 58888899999999876431 010 0 0 0012578899999999999998 79999
Q ss_pred eeeeeccchhhhhccEEEEEEec
Q 042677 456 WNLRSQLLKNWHLGQELYVRVYD 478 (504)
Q Consensus 456 w~~HCHil~H~~~Gm~~~~~V~~ 478 (504)
|.|||| .|..+||...+.|.+
T Consensus 85 y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 85 YTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp EEEECT--TTGGGTCEEEEEECC
T ss_pred EEEEeC--CchhcCCEEEEEEcC
Confidence 999999 599999999998853
No 75
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.16 E-value=5.1e-11 Score=98.81 Aligned_cols=78 Identities=21% Similarity=0.204 Sum_probs=61.9
Q ss_pred CCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchhhhh
Q 042677 2 FPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQK 81 (504)
Q Consensus 2 ~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~ 81 (504)
|++|.|++++||+|+++++|.+.. +||+.... .|. +..+.||++++|.|.+ +++|+||||||.....
T Consensus 35 f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~---~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~ 101 (112)
T 1iby_A 35 NEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV---QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKN 101 (112)
T ss_dssp EESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTT
T ss_pred EcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCch
Confidence 678999999999999999999865 56654321 122 4679999999999995 7899999999876443
Q ss_pred hCCccccEEEeC
Q 042677 82 AGGGFGPIRINN 93 (504)
Q Consensus 82 ~~Gl~G~liV~~ 93 (504)
.. |.|.|+|.+
T Consensus 102 ~~-M~g~i~V~~ 112 (112)
T 1iby_A 102 IH-LPGTLNVVE 112 (112)
T ss_dssp TB-CCEEEEEEC
T ss_pred HH-CEEEEEEeC
Confidence 33 999999964
No 76
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.06 E-value=3.6e-10 Score=92.63 Aligned_cols=82 Identities=12% Similarity=0.255 Sum_probs=62.1
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCc----cc-CCcCCCCCeEEEEEEeCCCceeeeeecchhh
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVS----GT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSINF 79 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~----~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~ 79 (504)
+.|++++||+|++ .|.....+++|+|+.... ..+|.. .. ...+.||++++|.|.+++++|+|||||| .
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~---~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~--~ 92 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNP---AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE--P 92 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSST---TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--T
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCc---ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--C
Confidence 7899999999755 588777888888876432 123320 01 2458899999999985468999999999 5
Q ss_pred hhhCCccccEEEeC
Q 042677 80 QKAGGGFGPIRINN 93 (504)
Q Consensus 80 ~~~~Gl~G~liV~~ 93 (504)
+...||.|.|+|.+
T Consensus 93 H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 93 HRGAGMVGKITVAG 106 (106)
T ss_dssp TGGGTCEEEEEECC
T ss_pred hhhcCcEEEEEEcC
Confidence 77789999999963
No 77
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.02 E-value=6.7e-09 Score=111.92 Aligned_cols=91 Identities=11% Similarity=0.046 Sum_probs=74.4
Q ss_pred CeEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc------------------
Q 042677 139 DWMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT------------------ 200 (504)
Q Consensus 139 ~~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~------------------ 200 (504)
..+.+|++.+.. ...+.++.|++++|.|+|.+... |+||||||.|+||+.+|...
T Consensus 459 ~~~~~n~~~~~~------~~~~~~~~g~~~~w~i~N~~~~~-HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~ 531 (612)
T 3gyr_A 459 KTYRRTARTFND------GLGFTIGEGTHEQWTFLNLSPIL-HPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDP 531 (612)
T ss_dssp EEEEEEECSTTS------CCCEEEETTCEEEEEEEECSSSC-EEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEE
T ss_pred ccccccCccCCC------CcceEeCCCCEEEEEEEcCCCCC-cCEeECCCcEEEEeecCCcCcccccccccccccccccc
Confidence 357788887632 35689999999999999998765 89999999999998776421
Q ss_pred ---------cceeeceEEEcCCcEEEEEEEecCCCceeEEEEecc
Q 042677 201 ---------NKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 201 ---------~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
++...|+|.|.+|+.+.|.+++..++|.|.+||+-.
T Consensus 532 ~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil 576 (612)
T 3gyr_A 532 DTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLL 576 (612)
T ss_dssp EEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSH
T ss_pred ccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCCh
Confidence 122479999999999999999655899999999964
No 78
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.00 E-value=5.5e-10 Score=117.18 Aligned_cols=84 Identities=18% Similarity=0.157 Sum_probs=63.0
Q ss_pred CCCCCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchh-h
Q 042677 1 MFPGPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSIN-F 79 (504)
Q Consensus 1 ~~PgP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~-~ 79 (504)
+||+|+|++++||+|+++|+|.+...-. +||+.... .|+ .+.|.||++++|.|++ +++|+||||||.. .
T Consensus 509 ~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv---~~~i~PG~t~t~~Fta-~~pGtY~yhC~e~Cg 578 (595)
T 1fwx_A 509 SFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV---AMEIGPQMTSSVTFVA-ANPGVYWYYCQWFCH 578 (595)
T ss_dssp EESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE---EEEECTTCEEEEEEEC-CSCEEEEEECCSCCS
T ss_pred cccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc---ceeeCCCCeEEEEEEC-CCCEEEEEECCCCCC
Confidence 4799999999999999999998643111 35554321 222 4678999999999996 7899999999931 1
Q ss_pred hhhCCccccEEEeCC
Q 042677 80 QKAGGGFGPIRINNR 94 (504)
Q Consensus 80 ~~~~Gl~G~liV~~~ 94 (504)
..-.||.|.|+|+++
T Consensus 579 ~~H~gM~G~IiV~p~ 593 (595)
T 1fwx_A 579 ALHMEMRGRMLVEPK 593 (595)
T ss_dssp TTCTTCEEEEEEECC
T ss_pred CCccCCEEEEEEEcC
Confidence 111399999999874
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.95 E-value=2.8e-09 Score=91.81 Aligned_cols=87 Identities=10% Similarity=0.028 Sum_probs=65.3
Q ss_pred CCeEEEcCCCeEEEEEEeCCCC-CeeeeeCCcCCC------------C---CCCCCCCc-cc--CCcCCCCCeEEEEEEe
Q 042677 4 GPLINCSTDDMIHVNVFNKMDE-PLLFTWNGIQQR------------L---NSWQDGVS-GT--NCPIQPGTNWTYVFQT 64 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l~~-~~siH~HG~~~~------------~---~~~~DG~~-~~--~~~i~pg~~~~y~~~~ 64 (504)
-+.|+|++||+|+++|+|.... .++++.++.... + ...-++.+ .+ ...|.||+++++.|.+
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~~ 113 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTA 113 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEEC
T ss_pred CCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEEC
Confidence 4789999999999999999876 788888874210 0 00011111 11 2348999999999996
Q ss_pred CCCceeeeeecchhhhhhCCccccEEEe
Q 042677 65 KDQIGSFFYFPSINFQKAGGGFGPIRIN 92 (504)
Q Consensus 65 ~~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 92 (504)
+++|+|+||||...+.. ||.|.|+|.
T Consensus 114 -~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 114 -PAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp -CSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred -CCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 68999999999887888 999999984
No 80
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.86 E-value=4.8e-09 Score=85.84 Aligned_cols=84 Identities=13% Similarity=-0.004 Sum_probs=63.1
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEe-cCcee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYL-DNPGM 455 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a-dnpG~ 455 (504)
.+.++.|+.|+|+ |.+...|++|+|+..+.. . .|. + .. ...+|++.+.||+...+.|.+ +.||.
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~~H~~~~~~~~~~~--~-~g~-~---~~------~~~~~~~~~~pG~~~~~~f~~~~~~G~ 85 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVPPHNVVFDAALNPA--K-SAD-L---AK------SLSHKQLLMSPGQSTSTTFPADAPAGE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCCCBEECSSSSTT--C-CHH-H---HH------HHCBCSCCCSTTCEEEEECCTTCCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCceEEEeCCCCcc--c-ccc-c---ch------hccccceeeCCCCEEEEEEecCCCCce
Confidence 4678999998775 877788999999765411 0 010 0 00 001467788899999999988 89999
Q ss_pred eeeeeccchhhhhccEEEEEEe
Q 042677 456 WNLRSQLLKNWHLGQELYVRVY 477 (504)
Q Consensus 456 w~~HCHil~H~~~Gm~~~~~V~ 477 (504)
|.|||| .|..+||...+.|.
T Consensus 86 y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 86 YTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp EEEECT--TTGGGTCEEEEEEC
T ss_pred EEEEeC--ChhhcCcEEEEEEc
Confidence 999999 69999999999885
No 81
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.78 E-value=1.2e-08 Score=82.39 Aligned_cols=73 Identities=12% Similarity=0.162 Sum_probs=59.9
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhCC
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAGG 84 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~G 84 (504)
..|++++||+|++.++|.....+++...+... ...+.||++.++.|+ ++++|+|.|+|.. +...|
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~------------~~~~~pg~~~~~~~t-~~~~G~Y~y~C~~--H~~~g 92 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKLGI------------DVVVESGKEKNITVK-PKSAGTYELICRY--HLLKG 92 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGGTE------------EEEECTTCEEEEEEC-CCSCEEEEEECTT--TGGGT
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecCCc------------ceeecCCcceeEEEe-cccCceEEEECcc--ccCCC
Confidence 57999999999999999987777776655422 134789999999999 4889999999974 56678
Q ss_pred ccccEEEe
Q 042677 85 GFGPIRIN 92 (504)
Q Consensus 85 l~G~liV~ 92 (504)
|.|.|+|+
T Consensus 93 M~G~i~Ve 100 (100)
T 4hci_A 93 MEGKVIVK 100 (100)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999985
No 82
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.77 E-value=1.5e-08 Score=87.34 Aligned_cols=96 Identities=14% Similarity=0.048 Sum_probs=70.7
Q ss_pred EEeeeCCcEEEEEEEe--CCCCcceeeecCc--ceEEEe-ec--cc---cCCccccCcCCCCCCCcccEEEeCCCcEEEE
Q 042677 377 VATGIHRGWIEIVLKN--ELEVIDSWHLDGF--GFYTVG-YG--IG---DWNPQLRSRYNLYDPVVRSTVQVYPGAWTAV 446 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N--~~~~~HP~HlHG~--~F~Vv~-~g--~g---~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~i 446 (504)
.++++.|+.|+|++.| .+.+.|.||++.. +|.-+. .+ .+ .|-+.. -....+++|..|.+|....+
T Consensus 34 ~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~t~~l~pG~~~~~ 108 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP-----DTPNALAWTAMLNAGESGSV 108 (140)
T ss_dssp EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT-----TCTTEEEECCCBCTTEEEEE
T ss_pred eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCcc-----ccccccccceeeCCCceeEE
Confidence 3778999999999999 6678999999843 221100 00 00 010000 00134678999999999999
Q ss_pred EEEecCceeeeeeeccchhhhhccEEEEEEe
Q 042677 447 YAYLDNPGMWNLRSQLLKNWHLGQELYVRVY 477 (504)
Q Consensus 447 rf~adnpG~w~~HCHil~H~~~Gm~~~~~V~ 477 (504)
.|.++.||.|.|||++..|...||...+.|.
T Consensus 109 ~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 109 TFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999885
No 83
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.74 E-value=4.8e-08 Score=84.15 Aligned_cols=89 Identities=10% Similarity=0.169 Sum_probs=65.2
Q ss_pred CCeEEEcCCCeEEEEEEe--CCCCCeeeeeCCcC------------C----CCCCCCCCCccc--CCcCCCCCeEEEEEE
Q 042677 4 GPLINCSTDDMIHVNVFN--KMDEPLLFTWNGIQ------------Q----RLNSWQDGVSGT--NCPIQPGTNWTYVFQ 63 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N--~l~~~~siH~HG~~------------~----~~~~~~DG~~~~--~~~i~pg~~~~y~~~ 63 (504)
-+.|+++.||+|+++++| .....++++.+... . ...+..|..... -..|.||++.++.|.
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEE
Confidence 468999999999999999 55677777776310 0 000001111111 245899999999999
Q ss_pred eCCCceeeeeecchhhhhhCCccccEEEeC
Q 042677 64 TKDQIGSFFYFPSINFQKAGGGFGPIRINN 93 (504)
Q Consensus 64 ~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 93 (504)
+ +.+|+|||||+...+...||.|.|+|.+
T Consensus 112 ~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 112 T-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp C-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred e-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 6 6799999999988888899999999963
No 84
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.72 E-value=1.4e-08 Score=81.81 Aligned_cols=79 Identities=11% Similarity=0.201 Sum_probs=58.1
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCC-ccc-CCcCCCCCeEEEEEEeCCCceeeeeecchhhhhh
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGV-SGT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKA 82 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~-~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~ 82 (504)
+.|++++||+|+ ++|.....+++|+|+..... ..|.- .-. ...+.||+++++.|. ++|+|+|||+ .+..
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~--~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~--~H~~ 88 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPS--GVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCE--PHQG 88 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCT--TCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECG--GGGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCC--ccccccccccceecCCCCEEEEEeC---CCeEEEEEcC--Cccc
Confidence 689999999875 58988778999999863211 11110 001 235789999999884 6999999999 4666
Q ss_pred CCccccEEEe
Q 042677 83 GGGFGPIRIN 92 (504)
Q Consensus 83 ~Gl~G~liV~ 92 (504)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 2plt_A 89 AGMVGKIIVQ 98 (98)
T ss_dssp GTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 7999999984
No 85
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.67 E-value=4.8e-08 Score=78.52 Aligned_cols=80 Identities=13% Similarity=0.239 Sum_probs=56.8
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhCC
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAGG 84 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~G 84 (504)
+.|++++||+|++ .|.....++++.++....+. ..++.......+.||+++++.| +++|+|+|||+ .+...|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~-~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~--~H~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPAD-TAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCE--PHRGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHH-HHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCcc-ccccccccccccCCCCEEEEEc---CCCeEEEEEcC--CccccC
Confidence 6899999998765 58877788999887532100 0000000023578999999988 36999999999 467789
Q ss_pred ccccEEEe
Q 042677 85 GFGPIRIN 92 (504)
Q Consensus 85 l~G~liV~ 92 (504)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 86
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.66 E-value=5.6e-08 Score=76.93 Aligned_cols=74 Identities=18% Similarity=0.335 Sum_probs=55.3
Q ss_pred CCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhC
Q 042677 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAG 83 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~ 83 (504)
-+.|++++||+|++ .|.....++++.++... .. . ....+.||+++++.| +++|+|||||+ .+...
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~----~~--~--~~~~~~~g~~~~~~f---~~~G~y~~~C~--~H~~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQPE----LS--H--KDLAFSPGETFEATF---SEPGTYTYYCE--PHRGA 82 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCGG----GC--E--EEEECSTTCEEEEEC---CSCEEEEEECT--TTGGG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCCc----cC--c--ccceeCCCCEEEEEe---CCCEEEEEEeC--CCccC
Confidence 36899999999765 58777788888887310 00 0 034578999998887 46999999999 45556
Q ss_pred CccccEEEe
Q 042677 84 GGFGPIRIN 92 (504)
Q Consensus 84 Gl~G~liV~ 92 (504)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 87
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.65 E-value=4.5e-08 Score=78.70 Aligned_cols=78 Identities=14% Similarity=0.026 Sum_probs=59.5
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|.|+ |.+...|.+|+++..+- +. ....+ .+|+..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~p--g~--------~~~~~------~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLSPHNIVFDADGVP--AD--------TAAKL------SHKGLLFAAGESFTSTF--TEPGTY 79 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECCSSSC--HH--------HHHHH------CEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCCCC--cc--------ccccc------cccccccCCCCEEEEEc--CCCeEE
Confidence 4788999998875 77778899999875421 00 00000 15788999999888766 899999
Q ss_pred eeeeccchhhhhccEEEEEE
Q 042677 457 NLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V 476 (504)
.|||+ .|..+||...+.|
T Consensus 80 ~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 80 TYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp EEECG--GGTTTTCEEEEEE
T ss_pred EEEcC--CccccCCeEEEEE
Confidence 99999 5999999999987
No 88
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.63 E-value=1.4e-07 Score=75.80 Aligned_cols=79 Identities=14% Similarity=0.041 Sum_probs=60.3
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|+| .|.+...|.+|+|+..+- ..++.. ..++|+..+.||+...++| +.||.|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~p------~~~~~~---------~~~~~~~~~~pG~~~~~tf--~~~G~y 79 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGFPHNIVFDEDAIP------SGVNAD---------AISRDDYLNAPGETYSVKL--TAAGEY 79 (98)
T ss_dssp EEEECTTCEEEE--EECSSCCEEEEECGGGSC------TTCCHH---------HHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceEEEEeCCCCC------Cccccc---------cccccceecCCCCEEEEEe--CCCeEE
Confidence 478899999877 788888999999975320 001100 0246889999999888766 589999
Q ss_pred eeeeccchhhhhccEEEEEE
Q 042677 457 NLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V 476 (504)
.|||| .|..+||...+.|
T Consensus 80 ~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 80 GYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp EEECG--GGGGGTCEEEEEE
T ss_pred EEEcC--CccccCCeEEEEE
Confidence 99999 5999999999987
No 89
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.61 E-value=1e-07 Score=79.65 Aligned_cols=76 Identities=12% Similarity=0.108 Sum_probs=52.8
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhCC
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAGG 84 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~G 84 (504)
..|+|++||+|++.++|. ++++..+. ...-+|.. ...+.||++++|.|. .+|+|||+|. .+...|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~-----~~~P~g~~--~f~~~pg~t~s~TF~---~pG~y~y~C~--~H~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIK-----EILPEGVE--SFKSKINESYTLTVT---EPGLYGVKCT--PHFGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECT-----TSSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEECG--GGTTTT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcC-----CcCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeC--CCCcCC
Confidence 589999999987777662 33333221 11123321 233578999999983 6999999998 467789
Q ss_pred ccccEEEeCCC
Q 042677 85 GFGPIRINNRI 95 (504)
Q Consensus 85 l~G~liV~~~~ 95 (504)
|.|.++|.+.+
T Consensus 86 M~G~I~V~~~~ 96 (123)
T 3erx_A 86 MVGLVQVGDAP 96 (123)
T ss_dssp CEEEEEESSSC
T ss_pred cEEEEEECCCC
Confidence 99999998633
No 90
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.59 E-value=1.9e-07 Score=73.87 Aligned_cols=71 Identities=13% Similarity=0.100 Sum_probs=56.9
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|.|+ |.+...|.+|+++.. . ...++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~~H~v~~~~~~---------~--------------~~~~~~~~~~g~~~~~~f--~~~G~y 72 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLAPHNVVVEGQP---------E--------------LSHKDLAFSPGETFEATF--SEPGTY 72 (91)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEETTCG---------G--------------GCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCcEEEEeCCC---------c--------------cCcccceeCCCCEEEEEe--CCCEEE
Confidence 4678999998774 777788999998720 0 124678889998777766 899999
Q ss_pred eeeeccchhhhhccEEEEEE
Q 042677 457 NLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V 476 (504)
.|||+ .|...||...+.|
T Consensus 73 ~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 73 TYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEECT--TTGGGTCEEEEEE
T ss_pred EEEeC--CCccCCCEEEEEE
Confidence 99999 5898999999887
No 91
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.56 E-value=1.5e-07 Score=75.51 Aligned_cols=76 Identities=13% Similarity=0.337 Sum_probs=55.6
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcc--c-CCcCCCCCeEEEEEEeCCCceeeeeecchhhhh
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSG--T-NCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQK 81 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~--~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~ 81 (504)
+.|++++||+| ++.|.....++++.++... -+|... . ...+.||+++++.| +++|+|+|||+ .+.
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe---CCCeEEEEEcc--Chh
Confidence 57999999986 5568776677777776532 122111 1 23478999999988 46999999999 556
Q ss_pred hCCccccEEEe
Q 042677 82 AGGGFGPIRIN 92 (504)
Q Consensus 82 ~~Gl~G~liV~ 92 (504)
..||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 67999999984
No 92
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.55 E-value=4.2e-07 Score=74.95 Aligned_cols=74 Identities=14% Similarity=0.169 Sum_probs=58.0
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|+|.+.|.+...|-|++... .-+..+.||+...+.|.++.||.|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~~~~G~y 91 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF---------------------------GVQEVIKAGETKTISFTADKAGAF 91 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG---------------------------TEEEEECTTCEEEEEEECCSCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC---------------------------CceeEeCCCCEEEEEEECCCCEEE
Confidence 37889999999999999877666555421 125678999999999999999999
Q ss_pred eeeeccchhhhhccEEEEEEec
Q 042677 457 NLRSQLLKNWHLGQELYVRVYD 478 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V~~ 478 (504)
.||||+..|... |...+.|.+
T Consensus 92 ~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 92 TIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp EEBCSSSCTTTB-CCEEEEEEC
T ss_pred EEECCCCCchHH-CEEEEEEeC
Confidence 999998554332 888888863
No 93
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.54 E-value=1.7e-07 Score=75.91 Aligned_cols=79 Identities=6% Similarity=0.041 Sum_probs=54.7
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCC----CCCCCccc---CCcCCCCCeEEEEEEeCCCceeeeeecch
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNS----WQDGVSGT---NCPIQPGTNWTYVFQTKDQIGSFFYFPSI 77 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~----~~DG~~~~---~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~ 77 (504)
+.|++++||+|+ +.|.....++++++.- .+.. .++..+++ ...+.||+++++.| +++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~- 88 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIP--AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCT- 88 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCC--TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECS-
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCc--ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeC-
Confidence 689999999976 5588766777777631 0000 00000111 23478999999988 46999999999
Q ss_pred hhhhhCCccccEEEe
Q 042677 78 NFQKAGGGFGPIRIN 92 (504)
Q Consensus 78 ~~~~~~Gl~G~liV~ 92 (504)
.+...||.|.|+|+
T Consensus 89 -~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 89 -PHKSANMKGTLTVK 102 (102)
T ss_dssp -TTGGGTCEEEEEEC
T ss_pred -CCcccCCeEEEEEC
Confidence 56778999999984
No 94
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.53 E-value=3.6e-07 Score=73.47 Aligned_cols=76 Identities=14% Similarity=0.275 Sum_probs=56.7
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcc------c-CCcCCCCCeEEEEEEeCCCceeeeeecch
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSG------T-NCPIQPGTNWTYVFQTKDQIGSFFYFPSI 77 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~------~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~ 77 (504)
+.|++++||+| +++|.....++++.++... -+|... . ...+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECG-
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcC-
Confidence 57999999986 5589887788888887432 122210 1 235789999999884 6999999999
Q ss_pred hhhhhCCccccEEEe
Q 042677 78 NFQKAGGGFGPIRIN 92 (504)
Q Consensus 78 ~~~~~~Gl~G~liV~ 92 (504)
.+...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 56777999999984
No 95
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.52 E-value=3.8e-07 Score=73.34 Aligned_cols=76 Identities=16% Similarity=0.255 Sum_probs=56.0
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCc----c--c-CCcCCCCCeEEEEEEeCCCceeeeeecch
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVS----G--T-NCPIQPGTNWTYVFQTKDQIGSFFYFPSI 77 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~----~--~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~ 77 (504)
+.|++++||+|+ ++|.....++++.++... -+|.. . . ...+.||+++++.|. ++|+|+|+|+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~- 85 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCS- 85 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC---CCceEEEEcC-
Confidence 689999999865 588877677888776422 12211 0 1 234789999998884 6999999999
Q ss_pred hhhhhCCccccEEEe
Q 042677 78 NFQKAGGGFGPIRIN 92 (504)
Q Consensus 78 ~~~~~~Gl~G~liV~ 92 (504)
.+..+||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 -PHQGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CCcccCCEEEEEEC
Confidence 56778999999984
No 96
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.51 E-value=1.5e-07 Score=79.14 Aligned_cols=76 Identities=13% Similarity=0.152 Sum_probs=51.8
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhCC
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAGG 84 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~G 84 (504)
+.|++++||+|.+.++|. + |++.......-+|.. ..-+.||++++|.| +.+|+|||+|.. +...|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~-----H~v~~~~~~~P~g~~--~f~s~pGet~s~TF---~~pG~y~y~C~~--H~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---G-----HNSALMKGGAPEGAE--TWKGKINEEITVTL---SKPGVYMYQCAP--HVGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---S-----CCCEECTTCSCTTCC--CCBCCTTCCCEEEC---CSCEEEEEECTT--TGGGT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEccCcCCCCcc--ceecCCCCEEEEEe---CCCeEEEEEeCC--CCcCC
Confidence 689999999977665553 3 444221111112321 23357899999888 369999999984 56789
Q ss_pred ccccEEEeCCC
Q 042677 85 GFGPIRINNRI 95 (504)
Q Consensus 85 l~G~liV~~~~ 95 (504)
|.|.++|.+++
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999744
No 97
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.47 E-value=1.1e-07 Score=76.18 Aligned_cols=77 Identities=13% Similarity=0.107 Sum_probs=58.0
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|.|+ |.+...|.+++++..+. .+ .. ...+++..+.||+...+.| +.||.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~~H~~~~~~~~~~-----~~------~~------~~~~~~~~~~~g~~~~~tf--~~~G~y 78 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVGPHNVIFDKVPAG-----ES------AP------ALSNTKLAIAPGSFYSVTL--GTPGTY 78 (97)
T ss_dssp EEEECTTCEEEEE--ECSSCCCCBEEEECCTT-----SC------HH------HHCBCCCCCSCSCCEEEEC--CSCSEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCCCCc-----cc------cc------cccccceecCCCCEEEEEe--CCCeEE
Confidence 3678999988775 77778899999876541 00 00 0014667788888877766 899999
Q ss_pred eeeeccchhhhhccEEEEEE
Q 042677 457 NLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V 476 (504)
.|||+ .|..+||...+.|
T Consensus 79 ~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 79 SFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp EEECS--STTTTTCEEEEEE
T ss_pred EEEcc--ChhhcCCEEEEEE
Confidence 99999 6999999999887
No 98
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.41 E-value=7.4e-07 Score=75.67 Aligned_cols=72 Identities=14% Similarity=0.151 Sum_probs=53.4
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhC
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAG 83 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~ 83 (504)
++|++++||+|++ .|....++++++... .+|.... ...+.||++++|.| +++|+|+|+|-.+.
T Consensus 60 ~~i~V~~GdtV~~--~N~d~~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H~---- 123 (132)
T 3c75_A 60 PEVTIKAGETVYW--VNGEVMPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP---- 123 (132)
T ss_dssp SEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT----
T ss_pred CEEEECCCCEEEE--EECCCCceEEEEeCC-------CCCcccccccccCCCCEEEEEc---CCCEEEEEEeCCCc----
Confidence 6899999999865 588776677666432 1232223 34588999999988 36999999997643
Q ss_pred CccccEEEe
Q 042677 84 GGFGPIRIN 92 (504)
Q Consensus 84 Gl~G~liV~ 92 (504)
||.|.|+|+
T Consensus 124 gM~G~I~V~ 132 (132)
T 3c75_A 124 FMRGKVIVE 132 (132)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 899999984
No 99
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.40 E-value=5.9e-07 Score=74.91 Aligned_cols=74 Identities=8% Similarity=0.064 Sum_probs=52.1
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhCC
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAGG 84 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~G 84 (504)
..|++++||+|. ++|.. .++++..+.. ..-+|.. ...+.||++|+|.|. .+|+|||||- .+...|
T Consensus 22 ~~i~V~~GDTV~--f~n~~-~~Hnv~~~~~-----~~p~g~~--~~~~~pg~t~s~TF~---~~G~y~Y~C~--~H~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD-KSHNAESVRE-----VWPEGVA--PVKGGFSKEVVFNAE---KEGLYVLKCA--PHYGMG 86 (124)
T ss_dssp SEEEECTTCEEE--EECSS-SSCCCEECTT-----TSCTTSC--CCBCCTTCCEEEECC---SSEEEEEECT--TTGGGT
T ss_pred CEEEECCCCEEE--EEECC-CCccEEEeCC-----cCCCCcc--ccccCCCCEEEEEeC---CCeEEEEEcC--CCCcCC
Confidence 689999999975 55554 4555554421 1112321 234679999999884 6899999996 467789
Q ss_pred ccccEEEeC
Q 042677 85 GFGPIRINN 93 (504)
Q Consensus 85 l~G~liV~~ 93 (504)
|.|.++|.+
T Consensus 87 M~G~I~V~~ 95 (124)
T 3ef4_A 87 MVVLVQVGK 95 (124)
T ss_dssp CEEEEEESS
T ss_pred CEEEEEECC
Confidence 999999987
No 100
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.39 E-value=1.8e-06 Score=69.56 Aligned_cols=72 Identities=21% Similarity=0.174 Sum_probs=59.6
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|.|++.|.+...|.|.+.+..+ ...+.||....+.|.++.||.|
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKLGI---------------------------DVVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGGTE---------------------------EEEECTTCEEEEEECCCSCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecCCc---------------------------ceeecCCcceeEEEecccCceE
Confidence 3788999999999999998888877654332 2346788889999999999999
Q ss_pred eeeeccchhhhhccEEEEEEe
Q 042677 457 NLRSQLLKNWHLGQELYVRVY 477 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V~ 477 (504)
.|+|.. |...||-..+.|.
T Consensus 82 ~y~C~~--H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICRY--HLLKGMEGKVIVK 100 (100)
T ss_dssp EEECTT--TGGGTCEEEEEEC
T ss_pred EEECcc--ccCCCCEEEEEEC
Confidence 999974 8889999988773
No 101
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.35 E-value=1.5e-06 Score=69.77 Aligned_cols=81 Identities=15% Similarity=0.019 Sum_probs=59.2
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|.| .|.+...|.+|+++..|. .+ ++... . ...+|++.+.+|+...+.| +.||.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~~H~~~~~~~~~p-----~g-~~~~~---~----~~~~~~~~~~~G~~~~~~f--~~~G~y 80 (99)
T 1byp_A 18 DLSIASGEKITF--KNNAGFPHNDLFDKKEVP-----AG-VDVTK---I----SMPEEDLLNAPGEEYSVTL--TEKGTY 80 (99)
T ss_dssp EEEECTTEEEEE--EECSSCCBCCEECTTSSC-----TT-CCHHH---H----SCCTTCCBCSTTCEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCcceEEEeCCCCc-----cc-ccccc---c----cccccceeeCCCCEEEEEe--CCCcEE
Confidence 467899998777 788888999999975541 01 11000 0 0125667788998877766 699999
Q ss_pred eeeeccchhhhhccEEEEEE
Q 042677 457 NLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V 476 (504)
.|||+ .|..+||...+.|
T Consensus 81 ~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 81 KFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp EEECG--GGTTTTCEEEEEE
T ss_pred EEEcC--CccccCCEEEEEE
Confidence 99999 5999999999887
No 102
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.30 E-value=1.1e-06 Score=70.45 Aligned_cols=76 Identities=13% Similarity=0.133 Sum_probs=54.0
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCc-c---c-CCcCCCCCeEEEEEEeCCCceeeeeecchhh
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVS-G---T-NCPIQPGTNWTYVFQTKDQIGSFFYFPSINF 79 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~-~---~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~ 79 (504)
+.|++++||+|++ .|.....+++....-.. -+|.- . . ...+.||+++++.| +++|+|+|+|..
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~-- 85 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEP-- 85 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTT--
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchh--
Confidence 6899999999655 58876677777664211 12221 0 0 13478999999988 469999999986
Q ss_pred hhhCCccccEEEe
Q 042677 80 QKAGGGFGPIRIN 92 (504)
Q Consensus 80 ~~~~Gl~G~liV~ 92 (504)
+...||.|.|+|+
T Consensus 86 H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 HAGAGMKMTITVQ 98 (98)
T ss_dssp TGGGTCEEEEEEC
T ss_pred hccCCCEEEEEEC
Confidence 5556899999984
No 103
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.29 E-value=1.2e-06 Score=73.89 Aligned_cols=88 Identities=15% Similarity=0.066 Sum_probs=58.7
Q ss_pred CeEEEcCC-CeEEEEEEeCCCCC-----eee--eeCCcCC-------------CCCCCCCCCccc-CCcCCCCCeEEEEE
Q 042677 5 PLINCSTD-DMIHVNVFNKMDEP-----LLF--TWNGIQQ-------------RLNSWQDGVSGT-NCPIQPGTNWTYVF 62 (504)
Q Consensus 5 P~i~~~~G-d~v~i~v~N~l~~~-----~si--H~HG~~~-------------~~~~~~DG~~~~-~~~i~pg~~~~y~~ 62 (504)
.+|.|++| |+|.|+|+|....+ +++ -=+|... ...+..|..-.. ..-|.||+++++.|
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKF 97 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEE
Confidence 58999999 99999999986432 332 2222100 000001111011 23479999999999
Q ss_pred EeC--CCceeeeeecchhhhhhCCccccEEEeC
Q 042677 63 QTK--DQIGSFFYFPSINFQKAGGGFGPIRINN 93 (504)
Q Consensus 63 ~~~--~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 93 (504)
.++ .++|+|||.|-...+.. ||.|.|+|.+
T Consensus 98 ~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 98 KVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred eccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 974 37999999998776666 7999999963
No 104
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.28 E-value=2e-06 Score=71.86 Aligned_cols=75 Identities=12% Similarity=0.107 Sum_probs=49.7
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhCC
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAGG 84 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~G 84 (504)
+.|++++||+|++ .|... ++++..+ ....-||.. .....||++++|.|. .+|+|||+|.. +...|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~-----~~~~p~~~~--~~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESI-----KDMIPEGAE--KFKSKINENYVLTVT---QPGAYLVKCTP--HYAMG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEEC-----TTCSCTTCC--CCBCCTTCCEEEECC---SCEEEEEECTT--TGGGT
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEe-----cccCCCCcc--ceecCCCCEEEEEeC---CCEEEEEEeCC--cccCC
Confidence 6899999999754 55533 3333332 111123321 122468999888883 69999999974 56679
Q ss_pred ccccEEEeCC
Q 042677 85 GFGPIRINNR 94 (504)
Q Consensus 85 l~G~liV~~~ 94 (504)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999873
No 105
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.24 E-value=1.5e-06 Score=70.19 Aligned_cols=83 Identities=11% Similarity=-0.039 Sum_probs=57.5
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCc-ccEEEeCCCcEEEEEEEecCcee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVV-RSTVQVYPGAWTAVYAYLDNPGM 455 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~-rDTv~vp~~g~~~irf~adnpG~ 455 (504)
.+.++.|+.|+|+ |.+...|.++++.-... .+.+..... .+.+ .+++.+.||+...+.| +.||.
T Consensus 18 ~i~v~~G~tV~~~--n~~~~~H~~~~~~~~~~-----~~~~~~~~~------~~~~~~~~~~~~pG~~~~~tf--~~~G~ 82 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVGETGHNIVFDIPAGA-----PGTVASELK------AASMDENDLLSEDEPSFKAKV--STPGT 82 (102)
T ss_dssp EEEECTTCCEEEE--ECSSSCBCCEECCCTTC-----CHHHHHHHH------HTSCCTTCCBBTTBCEEEECC--CSCEE
T ss_pred EEEECCCCEEEEE--ECCCCCeEEEEeCcccc-----cccccchhh------cccccccceecCCCCEEEEEe--CCCeE
Confidence 4788999998874 88778899998831100 000000000 0112 4677788998877766 89999
Q ss_pred eeeeeccchhhhhccEEEEEE
Q 042677 456 WNLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 456 w~~HCHil~H~~~Gm~~~~~V 476 (504)
|.|||+ .|..+||...+.|
T Consensus 83 y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 83 YTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp EEEECS--TTGGGTCEEEEEE
T ss_pred EEEEeC--CCcccCCeEEEEE
Confidence 999999 6999999999987
No 106
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.22 E-value=2.4e-06 Score=71.38 Aligned_cols=75 Identities=12% Similarity=0.084 Sum_probs=50.3
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhCC
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAGG 84 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~G 84 (504)
+.|++++||+|. +.|... ++++..+. ...-||.. ...+.||++++|.|. .+|+|+|+|.. +...|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~--~~~~~pG~t~~~tF~---~~G~y~y~C~~--H~~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGAD--YVKTTVGQEAVVKFD---KEGVYGFKCAP--HYMMG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCC--CCBCCTTSCEEEECC---SCEEEEEECST--TTTTT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCcc--ceecCCCCEEEEEeC---CCeEEEEEeCC--ccccC
Confidence 689999999965 556543 33333221 11123321 123569999888883 69999999974 56689
Q ss_pred ccccEEEeCC
Q 042677 85 GFGPIRINNR 94 (504)
Q Consensus 85 l~G~liV~~~ 94 (504)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 107
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.22 E-value=3e-06 Score=74.31 Aligned_cols=88 Identities=9% Similarity=-0.029 Sum_probs=58.2
Q ss_pred CeEEE-cCCCeEEEEEEeCCCCC-----eeee--eCCcC---------C---CCCCCCCCCccc-CCcCCCCCeEEEEEE
Q 042677 5 PLINC-STDDMIHVNVFNKMDEP-----LLFT--WNGIQ---------Q---RLNSWQDGVSGT-NCPIQPGTNWTYVFQ 63 (504)
Q Consensus 5 P~i~~-~~Gd~v~i~v~N~l~~~-----~siH--~HG~~---------~---~~~~~~DG~~~~-~~~i~pg~~~~y~~~ 63 (504)
.+|.| +.||+|+|+|+|....+ +++- -+|.. . ...+..|..... ..-|.||+++++.|.
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf~ 137 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLD 137 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEEC
T ss_pred ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEEe
Confidence 47999 99999999999997542 2222 22210 0 000001111011 234799999999998
Q ss_pred eC-CCceeeeeecchhhhhhCCccccEEEeC
Q 042677 64 TK-DQIGSFFYFPSINFQKAGGGFGPIRINN 93 (504)
Q Consensus 64 ~~-~~~Gt~wYH~H~~~~~~~Gl~G~liV~~ 93 (504)
++ -++|+|||+|-...+.. ||.|.|+|.+
T Consensus 138 ~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 138 PAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp GGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred cCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 64 16999999998776766 8999999963
No 108
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.18 E-value=5.8e-06 Score=67.25 Aligned_cols=72 Identities=14% Similarity=0.151 Sum_probs=50.6
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhC
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAG 83 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~ 83 (504)
..|++++||+|++ .|.....+++...... .|.... ...+.||+++++.| +++|+|+|+|-.+.
T Consensus 34 ~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~---- 97 (106)
T 1id2_A 34 PEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP---- 97 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT----
T ss_pred CEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC----
Confidence 6899999999765 5887655555543321 121112 23478999999988 36899999998743
Q ss_pred CccccEEEe
Q 042677 84 GGFGPIRIN 92 (504)
Q Consensus 84 Gl~G~liV~ 92 (504)
||.|.|+|+
T Consensus 98 ~M~G~I~V~ 106 (106)
T 1id2_A 98 FMRGKVIVE 106 (106)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 899999984
No 109
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.10 E-value=1.5e-05 Score=66.99 Aligned_cols=88 Identities=14% Similarity=0.056 Sum_probs=57.1
Q ss_pred CeEEE-cCCCeEEEEEEeCCCCC-----eeeee--CCcC-------------CCCCCCCCCCccc-CCcCCCCCeEEEEE
Q 042677 5 PLINC-STDDMIHVNVFNKMDEP-----LLFTW--NGIQ-------------QRLNSWQDGVSGT-NCPIQPGTNWTYVF 62 (504)
Q Consensus 5 P~i~~-~~Gd~v~i~v~N~l~~~-----~siH~--HG~~-------------~~~~~~~DG~~~~-~~~i~pg~~~~y~~ 62 (504)
.+|.| ++||+|.|+|+|....+ +++-+ +|.. ....+..|..-.. ..-|.||++++..|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTF 97 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEE
Confidence 57999 99999999999997442 33222 2210 0000011111111 23479999999999
Q ss_pred EeCC-Ccee-eeeecchhhhhhCCccccEEEeC
Q 042677 63 QTKD-QIGS-FFYFPSINFQKAGGGFGPIRINN 93 (504)
Q Consensus 63 ~~~~-~~Gt-~wYH~H~~~~~~~Gl~G~liV~~ 93 (504)
.++. ++|+ |||.|-...+.. ||.|.|+|.+
T Consensus 98 ~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~~ 129 (129)
T 2ccw_A 98 DVSKIAAGENYAYFCSFPGHWA-MMKGTLKLGS 129 (129)
T ss_dssp EGGGSCTTCCEEEECCSTTGGG-TSEEEEEECC
T ss_pred eccccCCCceEEEEeCCCChhH-cCEEEEEEeC
Confidence 9740 4655 999998776777 8999999963
No 110
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.06 E-value=1e-05 Score=64.79 Aligned_cols=81 Identities=15% Similarity=0.007 Sum_probs=57.7
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|.| .|.+...|.++++...+- .+ .+... . ...++.+.+.||+...+.| +.||.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~~H~v~~~~~~~p-----~~-~~~~~---~----~~~~~~~~~~~G~~~~~tf--~~~G~y 80 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNAGFPHNIVFDEDSIP-----SG-VDASK---I----SMSEEDLLNAKGETFEVAL--SNKGEY 80 (99)
T ss_dssp EEEECTTCEEEE--EECSSCCBCCEECTTSSC-----TT-CCHHH---H----CCCTTCCBCSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCceEEEEeCCCCc-----cc-ccccc---c----ccccCccccCCCCEEEEEE--CCCceE
Confidence 478899998877 788888999999875430 00 00000 0 0123556788898777765 699999
Q ss_pred eeeeccchhhhhccEEEEEE
Q 042677 457 NLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V 476 (504)
.|||+ .|..+||...+.|
T Consensus 81 ~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 81 SFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp EEECG--GGTTTTCEEEEEE
T ss_pred EEEcC--CCcccCCEEEEEE
Confidence 99999 5888999999887
No 111
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.96 E-value=3.9e-05 Score=64.35 Aligned_cols=88 Identities=15% Similarity=0.086 Sum_probs=57.8
Q ss_pred CeEEE-cCCCeEEEEEEeCCCCC-----eeeeeC--C---------c----CCCCCCCCCCCccc-CCcCCCCCeEEEEE
Q 042677 5 PLINC-STDDMIHVNVFNKMDEP-----LLFTWN--G---------I----QQRLNSWQDGVSGT-NCPIQPGTNWTYVF 62 (504)
Q Consensus 5 P~i~~-~~Gd~v~i~v~N~l~~~-----~siH~H--G---------~----~~~~~~~~DG~~~~-~~~i~pg~~~~y~~ 62 (504)
.+|.| +.|++|+|+|+|....+ +++-+- + + .....+..|..-.. ...|.||+++++.|
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vtf 96 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVTF 96 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEEE
Confidence 57999 99999999999997543 433221 1 0 00000011111111 23479999999999
Q ss_pred EeCC-Ccee-eeeecchhhhhhCCccccEEEeC
Q 042677 63 QTKD-QIGS-FFYFPSINFQKAGGGFGPIRINN 93 (504)
Q Consensus 63 ~~~~-~~Gt-~wYH~H~~~~~~~Gl~G~liV~~ 93 (504)
.++. ++|+ |+|.|-...+.. ||.|.|+|.+
T Consensus 97 ~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~~ 128 (128)
T 2iaa_C 97 DVSKLKEGEDYAFFCSFPGHWS-IMKGTIELGS 128 (128)
T ss_dssp ESSCCCTTCCEEEECCSTTCTT-TSEEEEEECC
T ss_pred eccccCCCceEEEEECCCChhH-CCEEEEEEeC
Confidence 9631 5885 999998777777 8999999963
No 112
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.96 E-value=1.8e-05 Score=68.86 Aligned_cols=82 Identities=13% Similarity=0.052 Sum_probs=59.1
Q ss_pred EEeeeCCcEEEEEEEeCC-CCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccE-------EEeCCCc--EEEE
Q 042677 377 VATGIHRGWIEIVLKNEL-EVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRST-------VQVYPGA--WTAV 446 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~-~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDT-------v~vp~~g--~~~i 446 (504)
.+.++.|+.|.+++.|.+ ...|-+-++. .+. .+.. . |...+. ..|.||+ ...+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~-------~~~-~~~~-----~----~~~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITK-------KGP-PYAV-----M----PVIDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEES-------CCS-CCCS-----S----CCCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEee-------cCc-chhc-----c----ccccccccccccccccCCCCceEEEE
Confidence 588999999999999974 5556555442 211 1110 0 001111 1567888 9999
Q ss_pred EEEecCceeeeeeeccchhhhhccEEEEEE
Q 042677 447 YAYLDNPGMWNLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 447 rf~adnpG~w~~HCHil~H~~~Gm~~~~~V 476 (504)
.|++ .||.+.||||+..|...||-..+.|
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 9999 9999999999999999999998877
No 113
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.95 E-value=3.8e-05 Score=64.44 Aligned_cols=87 Identities=13% Similarity=0.054 Sum_probs=56.9
Q ss_pred CeEEE-cCCCeEEEEEEeCCCCC-----eeeee--CCcCC-------CCCCCC-----CCCccc--CCcCCCCCeEEEEE
Q 042677 5 PLINC-STDDMIHVNVFNKMDEP-----LLFTW--NGIQQ-------RLNSWQ-----DGVSGT--NCPIQPGTNWTYVF 62 (504)
Q Consensus 5 P~i~~-~~Gd~v~i~v~N~l~~~-----~siH~--HG~~~-------~~~~~~-----DG~~~~--~~~i~pg~~~~y~~ 62 (504)
.+|.| +.||+|+|+|+|....+ +++-+ .|... .....+ |..-.+ ...|.||+++++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEE
Confidence 57999 99999999999997442 43332 22100 000000 111111 22489999999999
Q ss_pred EeCC-Ccee-eeeecchhhhhhCCccccEEEe
Q 042677 63 QTKD-QIGS-FFYFPSINFQKAGGGFGPIRIN 92 (504)
Q Consensus 63 ~~~~-~~Gt-~wYH~H~~~~~~~Gl~G~liV~ 92 (504)
.++. ++|+ |||.|-...+.. ||.|.|+|.
T Consensus 98 ~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 98 DVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred eccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 9641 4776 999998777777 899999984
No 114
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.95 E-value=1.5e-05 Score=66.47 Aligned_cols=74 Identities=9% Similarity=0.045 Sum_probs=48.9
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchhhhhhCC
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSINFQKAGG 84 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~~~~~~G 84 (504)
+.|++++||+|.+ .|... .++++... ...-+|.. ...+.||++++|.|. ++|+|||+|-.+..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~-----~~~p~~~~--~~~~~~g~t~~~tF~---~~G~y~y~C~~H~~---- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIK-----GMIPDGAE--AFKSKINENYKVTFT---APGVYGVKCTPHPF---- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECT-----TCSCTTCC--CCBCCTTCCEEEEEC---SCEEEEEEETTEEE----
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEcc-----cccCCCcc--eeecCCCCEEEEEeC---CCEEEEEEeCCCcc----
Confidence 6899999998654 56643 33333332 11122321 233568999999883 68999999987432
Q ss_pred ccccEEEeCCC
Q 042677 85 GFGPIRINNRI 95 (504)
Q Consensus 85 l~G~liV~~~~ 95 (504)
|.|.|+|.+.+
T Consensus 84 M~G~I~V~~~p 94 (122)
T 2ux6_A 84 MVGVVQVGDAP 94 (122)
T ss_dssp EEEEEEESSSC
T ss_pred CEEEEEEeCCC
Confidence 99999998743
No 115
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.94 E-value=3.7e-05 Score=80.71 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=60.9
Q ss_pred EEEeeeCCcEEEEEEEeCC---CCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecC
Q 042677 376 FVATGIHRGWIEIVLKNEL---EVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDN 452 (504)
Q Consensus 376 ~~~~~~~g~~v~ivi~N~~---~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 452 (504)
..+.++.|+.|+|.+.|.+ +..|.|+++++.+. ..+.||....++|+++.
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEECCC
Confidence 3578999999999999964 34799998875421 45778999999999999
Q ss_pred ceeeeeeeccc-hhhhhccEEEEEEecC
Q 042677 453 PGMWNLRSQLL-KNWHLGQELYVRVYDA 479 (504)
Q Consensus 453 pG~w~~HCHil-~H~~~Gm~~~~~V~~~ 479 (504)
||.|.||||.. .-.|.||...+.|.++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~ 593 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPK 593 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcC
Confidence 99999999931 1133599999999754
No 116
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.92 E-value=2.7e-05 Score=63.16 Aligned_cols=71 Identities=8% Similarity=-0.088 Sum_probs=50.3
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|+| .|.+...|.+|+++.. .|. ..+ +.-.+.+|+...+.| +.||.+
T Consensus 34 ~i~v~~Gd~V~~--~N~d~~~H~v~~~~~~-------~g~------~~~--------~~~~~~pG~~~~~tf--~~~G~y 88 (105)
T 2ov0_A 34 ELHVKVGDTVTW--INREAMPHNVHFVAGV-------LGE------AAL--------KGPMMKKEQAYSLTF--TEAGTY 88 (105)
T ss_dssp EEEECTTCEEEE--EECSSSCBCCEECTTT-------SSS------SCE--------ECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEE--EECCCCCEEEEEcCCC-------CCc------ccc--------cccccCCCCEEEEEe--CCCEEE
Confidence 477899999877 4888889999988522 111 001 122367888666655 899999
Q ss_pred eeeeccchhhhhccEEEEEE
Q 042677 457 NLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V 476 (504)
.|||++ |. ||...+.|
T Consensus 89 ~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 89 DYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999997 44 99888877
No 117
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.68 E-value=4.4e-05 Score=78.64 Aligned_cols=78 Identities=18% Similarity=0.166 Sum_probs=57.0
Q ss_pred CCCeEEEcCCCeEEEEEEeCC---CCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchh-
Q 042677 3 PGPLINCSTDDMIHVNVFNKM---DEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSIN- 78 (504)
Q Consensus 3 PgP~i~~~~Gd~v~i~v~N~l---~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~- 78 (504)
--+.|+|++||+|++.++|.. +..+++...++ | +..-+.||++.++.|.+ +++|+|||+|..-
T Consensus 556 sP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------G---IK~DaiPGrtnsvtFta-dkPGvY~y~CSE~C 622 (638)
T 3sbq_A 556 GVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------G---VSMEISPQQTSSITFVA-DKPGLHWYYCSWFC 622 (638)
T ss_dssp SCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------T---EEEEECTTCEEEEEEEC-CSCEEEEEECCSCC
T ss_pred cCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------C---ceeeeCCCCeEEEEEEc-CCCEEEEEECCCcC
Confidence 346899999999999999974 23333333222 1 12347899999999995 7899999999852
Q ss_pred hhhhCCccccEEEeC
Q 042677 79 FQKAGGGFGPIRINN 93 (504)
Q Consensus 79 ~~~~~Gl~G~liV~~ 93 (504)
...-.+|.|.|+|++
T Consensus 623 Ga~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 623 HALHMEMVGRMMVEP 637 (638)
T ss_dssp STTCTTCEEEEEEEC
T ss_pred CCCcccceEEEEEec
Confidence 222346999999986
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.32 E-value=0.001 Score=54.84 Aligned_cols=85 Identities=13% Similarity=0.183 Sum_probs=53.3
Q ss_pred CCeEEEcC-CCeEEEEEEeCCCCC-----eeeee-----------CCcCCC-CCCC---CCCCccc-CCcCCCCCeEEEE
Q 042677 4 GPLINCST-DDMIHVNVFNKMDEP-----LLFTW-----------NGIQQR-LNSW---QDGVSGT-NCPIQPGTNWTYV 61 (504)
Q Consensus 4 gP~i~~~~-Gd~v~i~v~N~l~~~-----~siH~-----------HG~~~~-~~~~---~DG~~~~-~~~i~pg~~~~y~ 61 (504)
-..|.|+. |++|+|+|+|....+ +++=+ -|+... ...+ .|-.... -.-|.||++++..
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 45799976 999999999997432 22111 122110 0011 1211111 2348999999999
Q ss_pred EEeC--CCceeeeeecchhhhhhCCccccEEEe
Q 042677 62 FQTK--DQIGSFFYFPSINFQKAGGGFGPIRIN 92 (504)
Q Consensus 62 ~~~~--~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 92 (504)
|+.+ ..+|+|.|.|. .+. ||.|.|+|.
T Consensus 97 f~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9975 27999999999 455 899999884
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.28 E-value=0.00033 Score=58.55 Aligned_cols=75 Identities=15% Similarity=0.028 Sum_probs=49.5
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.++++.|+.|.|++.|. .|-+..+.. .+ ++.. ..+.+.||+...+.| +.||.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---~H~v~~~~~----------~~-P~g~-----------~~f~s~pGet~s~TF--~~pG~y 76 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---GHNSALMKG----------GA-PEGA-----------ETWKGKINEEITVTL--SKPGVY 76 (127)
T ss_dssp EEEECTTCEEEEECSSS---SCCCEECTT----------CS-CTTC-----------CCCBCCTTCCCEEEC--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEccC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 47899999998876653 454444321 00 1100 111224677555554 899999
Q ss_pred eeeeccchhhhhccEEEEEEecCC
Q 042677 457 NLRSQLLKNWHLGQELYVRVYDAD 480 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V~~~~ 480 (504)
.|||- .|..+||-..+.|.+++
T Consensus 77 ~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 77 MYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp EEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEeC--CCCcCCcEEEEEECcCC
Confidence 99999 49999999999998765
No 120
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.26 E-value=0.0014 Score=52.08 Aligned_cols=79 Identities=13% Similarity=0.089 Sum_probs=54.1
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|+|+ |.+...|-+.+....+ ...++.. ..-.+...+.+|....+.| +.||.|
T Consensus 19 ~i~v~~GdtV~~~--n~~~~~H~v~~~~~~~------p~g~~~~---------~~~~~~~~~~~g~~~~~tf--~~~G~y 79 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNAGFPHNIVFDEDAV------PAGVDAD---------AISYDDYLNSKGETVVRKL--STPGVY 79 (98)
T ss_dssp EEEECTTCEEEEE--ECSSCCEEEEECTTSS------CTTCCHH---------HHCEEEEECSTTCEEEEEC--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCCEEEEEeCCCC------ccccccc---------cccccccccCCCCEEEEEc--CCCEEE
Confidence 5788999998874 7777788776653110 0000000 0013446788898777766 899999
Q ss_pred eeeeccchhhhhccEEEEEE
Q 042677 457 NLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V 476 (504)
.|+|-+ |..+||-..+.|
T Consensus 80 ~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 80 GVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEECTT--TGGGTCEEEEEE
T ss_pred EEEchh--hccCCCEEEEEE
Confidence 999986 888899988877
No 121
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.22 E-value=0.00054 Score=56.91 Aligned_cols=74 Identities=12% Similarity=0.060 Sum_probs=50.4
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.++++.|++|+|+.. + ..|.+..+.. .+... .+.+.+.+|....+.| +.||.|
T Consensus 23 ~i~V~~GDTV~f~n~--~-~~Hnv~~~~~----------~~p~g------------~~~~~~~pg~t~s~TF--~~~G~y 75 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPT--D-KSHNAESVRE----------VWPEG------------VAPVKGGFSKEVVFNA--EKEGLY 75 (124)
T ss_dssp EEEECTTCEEEEECS--S-SSCCCEECTT----------TSCTT------------SCCCBCCTTCCEEEEC--CSSEEE
T ss_pred EEEECCCCEEEEEEC--C-CCccEEEeCC----------cCCCC------------ccccccCCCCEEEEEe--CCCeEE
Confidence 478999999988644 3 5676665421 11100 0122345777665555 899999
Q ss_pred eeeeccchhhhhccEEEEEEecC
Q 042677 457 NLRSQLLKNWHLGQELYVRVYDA 479 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V~~~ 479 (504)
.|||- .|..+||-..+.|.++
T Consensus 76 ~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 76 VLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp EEECT--TTGGGTCEEEEEESSC
T ss_pred EEEcC--CCCcCCCEEEEEECCC
Confidence 99997 5999999999999875
No 122
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.18 E-value=0.00089 Score=55.61 Aligned_cols=75 Identities=13% Similarity=0.115 Sum_probs=50.7
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.++++.|+.|.|++.|. .|-+..+.. .+ ++.. +.+.+.|++...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~~~~~---~H~v~~~~~----------~~-P~g~-----------~~f~~~pg~t~s~TF--~~pG~y 74 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK---SHNVEAIKE----------IL-PEGV-----------ESFKSKINESYTLTV--TEPGLY 74 (123)
T ss_dssp EEEECTTEEEEEEESST---TCCCEECTT----------SS-CTTC-----------CCCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEEECCC---CceEEEcCC----------cC-CCCc-----------cceecCCCCEEEEEe--CCCeEE
Confidence 47899999999987763 355444311 01 1000 111235677666666 899999
Q ss_pred eeeeccchhhhhccEEEEEEecCC
Q 042677 457 NLRSQLLKNWHLGQELYVRVYDAD 480 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V~~~~ 480 (504)
.|+|- .|..+||-..+.|.+++
T Consensus 75 ~y~C~--~H~~~GM~G~I~V~~~~ 96 (123)
T 3erx_A 75 GVKCT--PHFGMGMVGLVQVGDAP 96 (123)
T ss_dssp EEECG--GGTTTTCEEEEEESSSC
T ss_pred EEEeC--CCCcCCcEEEEEECCCC
Confidence 99999 59999999999998744
No 123
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.14 E-value=0.0013 Score=53.14 Aligned_cols=71 Identities=11% Similarity=-0.128 Sum_probs=49.0
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|.|+ |.+...|.+++....- |. . ..++-.+.+|....+.| +.||.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~~H~v~~~~~~~-------~~------~--------~~~s~~l~~g~~~~~tf--~~~G~y 89 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVMPHNVAFKKGIV-------GE------D--------AFRGEMMTKDQAYAITF--NEAGSY 89 (106)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTTS-------SS------S--------CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCcEEEEEeCCCC-------Cc------c--------cccccccCCCCEEEEEe--CCCEEE
Confidence 3678999998875 8777778776653210 00 0 01223467788777666 899999
Q ss_pred eeeeccchhhhhccEEEEEE
Q 042677 457 NLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V 476 (504)
.|+|-+ |. ||-..+.|
T Consensus 90 ~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--CC--CCEEEEEE
Confidence 999987 54 99888877
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.96 E-value=0.0021 Score=54.07 Aligned_cols=71 Identities=11% Similarity=-0.120 Sum_probs=49.8
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|+|+ |.+...|.+++.... .|. . ..++-.+.+|+...+.| +.||.+
T Consensus 61 ~i~V~~GdtV~~~--N~d~~~H~v~~~~~~-------~g~-------------~-~~~s~~l~pG~t~~~tF--~~~G~y 115 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVMPHNVAFKKGI-------VGE-------------D-AFRGEMMTKDQAYAITF--NEAGSY 115 (132)
T ss_dssp EEEECTTCEEEEE--ECSSSCBCCEECTTT-------SSS-------------S-CEECCCBCTTEEEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCCCceEEEEeCCC-------CCc-------------c-cccccccCCCCEEEEEc--CCCEEE
Confidence 4778999998875 887778887765321 000 0 01233467888777666 799999
Q ss_pred eeeeccchhhhhccEEEEEE
Q 042677 457 NLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V 476 (504)
.|||-+ |. ||-..+.|
T Consensus 116 ~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 116 DYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp EEECSS--CT--TCEEEEEE
T ss_pred EEEeCC--Cc--CCEEEEEE
Confidence 999987 54 99988877
No 125
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.63 E-value=0.0089 Score=61.76 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=59.3
Q ss_pred EEEeeeCCcEEEEEEEeCC---CCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecC
Q 042677 376 FVATGIHRGWIEIVLKNEL---EVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDN 452 (504)
Q Consensus 376 ~~~~~~~g~~v~ivi~N~~---~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 452 (504)
..+.++.|+.|+|++.|.+ +..|.|-+.+.... +.+.||....+.|.++.
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK---------------------------~DaiPGrtnsvtFtadk 610 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS---------------------------MEISPQQTSSITFVADK 610 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEECCS
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCce---------------------------eeeCCCCeEEEEEEcCC
Confidence 3567899999999999974 67888877654321 25678899999999999
Q ss_pred ceeeeeeeccchh-hhhccEEEEEEe
Q 042677 453 PGMWNLRSQLLKN-WHLGQELYVRVY 477 (504)
Q Consensus 453 pG~w~~HCHil~H-~~~Gm~~~~~V~ 477 (504)
||.|.++|...-| .|.+|...+.|.
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred CEEEEEECCCcCCCCcccceEEEEEe
Confidence 9999999996444 367899998885
No 126
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.37 E-value=0.013 Score=48.53 Aligned_cols=38 Identities=13% Similarity=0.226 Sum_probs=30.0
Q ss_pred CCCcEEEEEEEecCceeeeeeeccchhhhhccEEEEEEecCC
Q 042677 439 YPGAWTAVYAYLDNPGMWNLRSQLLKNWHLGQELYVRVYDAD 480 (504)
Q Consensus 439 p~~g~~~irf~adnpG~w~~HCHil~H~~~Gm~~~~~V~~~~ 480 (504)
.+|....+ .++.||.|.|+|-. |..+||-..+.|.+++
T Consensus 59 ~pG~t~~~--tF~~~G~y~y~C~~--H~~~gM~G~I~V~~~~ 96 (123)
T 1paz_A 59 KINENYVL--TVTQPGAYLVKCTP--HYAMGMIALIAVGDSP 96 (123)
T ss_dssp CTTCCEEE--ECCSCEEEEEECTT--TGGGTCEEEEEESSSC
T ss_pred CCCCEEEE--EeCCCEEEEEEeCC--cccCCCEEEEEEcCCC
Confidence 46765444 45899999999984 8889999999998643
No 127
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.35 E-value=0.013 Score=51.17 Aligned_cols=94 Identities=14% Similarity=-0.019 Sum_probs=60.5
Q ss_pred Eee-eCCcEEEEEEEeCCCCcc-eeeecCcceEEEeeccccCCcc-------ccCcC-CCCC-CCcccEEEeCCCcEEEE
Q 042677 378 ATG-IHRGWIEIVLKNELEVID-SWHLDGFGFYTVGYGIGDWNPQ-------LRSRY-NLYD-PVVRSTVQVYPGAWTAV 446 (504)
Q Consensus 378 ~~~-~~g~~v~ivi~N~~~~~H-P~HlHG~~F~Vv~~g~g~~~~~-------~~~~~-~~~~-p~~rDTv~vp~~g~~~i 446 (504)
+++ +.|+.|.|+|.|.+.... -| +|.|-|...+. ++.. ....| ...+ -....+..|.||+...|
T Consensus 60 itV~kaG~~Vtv~~~N~g~~p~~~m---~Hn~vi~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~sv 134 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQPKASM---GHNLVIAKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSL 134 (167)
T ss_dssp EEEETTCSSEEEEEEECSCSCHHHH---CBCCEEEEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred EEEecCCCEEEEEEEECCCCccccc---cceEEeccCcc--hhhhHHHhhhccccccccccccchhccceeeCCCCEEEE
Confidence 678 899999999999986530 00 12343333221 0000 00000 0001 12345667899999999
Q ss_pred EEEec--CceeeeeeeccchhhhhccEEEEEEe
Q 042677 447 YAYLD--NPGMWNLRSQLLKNWHLGQELYVRVY 477 (504)
Q Consensus 447 rf~ad--npG~w~~HCHil~H~~~Gm~~~~~V~ 477 (504)
.|.++ .||.|-|+|-+-.|.. ||-..+.|.
T Consensus 135 tf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 135 TLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred EEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 99988 8999999999888888 898888885
No 128
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.35 E-value=0.0086 Score=50.47 Aligned_cols=74 Identities=15% Similarity=0.143 Sum_probs=50.8
Q ss_pred eEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecchh-hhhhCC
Q 042677 6 LINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSIN-FQKAGG 84 (504)
Q Consensus 6 ~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~~-~~~~~G 84 (504)
.|.++.|++|++.++|.+ .. |++... .-| +..-+.||+.-++.|.+ +++|+|+|.|..- ...-.+
T Consensus 61 ~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip----~~~---~k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H~~ 126 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD-VI-----HGFHVE----GTN---INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQN 126 (135)
T ss_dssp SEEEETTSEEEEEEEBSS-SC-----EEEEET----TSS---CEEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTSTT
T ss_pred EEEEcCCCEEEEEEEeCC-cc-----ceEEec----CCC---ceeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCcCC
Confidence 689999999999999974 33 333221 111 12335789988899985 7899999999541 111247
Q ss_pred ccccEEEeC
Q 042677 85 GFGPIRINN 93 (504)
Q Consensus 85 l~G~liV~~ 93 (504)
|.|.++|.+
T Consensus 127 M~g~v~V~~ 135 (135)
T 2cua_A 127 MFGTIVVKE 135 (135)
T ss_dssp CEEEEEEEC
T ss_pred CEEEEEEEC
Confidence 889988863
No 129
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=96.27 E-value=0.024 Score=47.30 Aligned_cols=98 Identities=7% Similarity=-0.061 Sum_probs=61.2
Q ss_pred EEeeeCC-cEEEEEEEeCCCCcceeeecCcceEEEeecccc------CCccccCcCCC-CCC-CcccEEEeCCCcEEEEE
Q 042677 377 VATGIHR-GWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGD------WNPQLRSRYNL-YDP-VVRSTVQVYPGAWTAVY 447 (504)
Q Consensus 377 ~~~~~~g-~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~------~~~~~~~~~~~-~~p-~~rDTv~vp~~g~~~ir 447 (504)
.++++.| +.|.++|.|.+.... =-=+|.|-+...+... ........+-. .++ ....+..|.||+...+.
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~--~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPK--TGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVK 96 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCH--HHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEE
T ss_pred eEEEcCCCeEEEEEEEECCCCcc--cccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEE
Confidence 4789999 999999999986530 0002244444332100 00000000100 011 12345678899999999
Q ss_pred EEec---CceeeeeeeccchhhhhccEEEEEEe
Q 042677 448 AYLD---NPGMWNLRSQLLKNWHLGQELYVRVY 477 (504)
Q Consensus 448 f~ad---npG~w~~HCHil~H~~~Gm~~~~~V~ 477 (504)
|.++ .||.+-|.|-+-.|.. ||-..+.|.
T Consensus 97 f~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 97 FKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp EEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred EeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 9997 9999999999877888 898888885
No 130
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.16 E-value=0.0085 Score=49.63 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=30.7
Q ss_pred eCCCcEEEEEEEecCceeeeeeeccchhhhhccEEEEEEecCC
Q 042677 438 VYPGAWTAVYAYLDNPGMWNLRSQLLKNWHLGQELYVRVYDAD 480 (504)
Q Consensus 438 vp~~g~~~irf~adnpG~w~~HCHil~H~~~Gm~~~~~V~~~~ 480 (504)
+.+|....+. ++.||.|.|+|-. |..+||-..+.|.+++
T Consensus 58 ~~pG~t~~~t--F~~~G~y~y~C~~--H~~~gM~G~I~V~~~~ 96 (123)
T 1pmy_A 58 TTVGQEAVVK--FDKEGVYGFKCAP--HYMMGMVALVVVGDKR 96 (123)
T ss_dssp CCTTSCEEEE--CCSCEEEEEECST--TTTTTCEEEEEESSCC
T ss_pred cCCCCEEEEE--eCCCeEEEEEeCC--ccccCCEEEEEEcCCC
Confidence 3467755554 4899999999984 8888999999998644
No 131
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.97 E-value=0.042 Score=46.21 Aligned_cols=72 Identities=19% Similarity=0.141 Sum_probs=51.9
Q ss_pred EeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceeee
Q 042677 378 ATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWN 457 (504)
Q Consensus 378 ~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~ 457 (504)
+.++.|+.|+|++.|.+ ..|.| .|-+. . --+.+.||....+.|.++.||.+.
T Consensus 62 l~Vp~G~~V~~~vts~D-V~Hsf-------~ip~~-------------~-------~k~d~~PG~~~~~~~~~~~~G~y~ 113 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD-VIHGF-------HVEGT-------------N-------INVEVLPGEVSTVRYTFKRPGEYR 113 (135)
T ss_dssp EEEETTSEEEEEEEBSS-SCEEE-------EETTS-------------S-------CEEEECBTBCEEEEEECCSCEEEE
T ss_pred EEEcCCCEEEEEEEeCC-ccceE-------EecCC-------------C-------ceeEeCCCCcEEEEEEcCCCEEEE
Confidence 67899999999999974 45544 33111 1 113456788788999999999999
Q ss_pred eeeccch-hhhhccEEEEEEe
Q 042677 458 LRSQLLK-NWHLGQELYVRVY 477 (504)
Q Consensus 458 ~HCHil~-H~~~Gm~~~~~V~ 477 (504)
+.|...- .-|.+|-..++|.
T Consensus 114 ~~C~e~CG~~H~~M~g~v~V~ 134 (135)
T 2cua_A 114 IICNQYCGLGHQNMFGTIVVK 134 (135)
T ss_dssp EECCSCCSTTSTTCEEEEEEE
T ss_pred EECcccCCCCcCCCEEEEEEE
Confidence 9996511 2446898888886
No 132
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.70 E-value=0.024 Score=49.43 Aligned_cols=75 Identities=17% Similarity=0.157 Sum_probs=53.1
Q ss_pred CeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEEEEEeCCCceeeeeecch-hhhhhC
Q 042677 5 PLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTYVFQTKDQIGSFFYFPSI-NFQKAG 83 (504)
Q Consensus 5 P~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y~~~~~~~~Gt~wYH~H~-~~~~~~ 83 (504)
..|.++.|+.|++.++|. +-.+++..-++. ++.-+-||+.....|.+ +++|+|++.|.. -...-.
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf~IP~lg------------ik~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~Hs 158 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGFHVEGTN------------INVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGHQ 158 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEEEETTSS------------CEEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTGG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEEEECCCC------------eEEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCcC
Confidence 368899999999999997 333333322221 12235689999999995 889999999984 234445
Q ss_pred CccccEEEeC
Q 042677 84 GGFGPIRINN 93 (504)
Q Consensus 84 Gl~G~liV~~ 93 (504)
+|.|-++|++
T Consensus 159 ~M~g~V~V~e 168 (168)
T 3s8f_B 159 NMFGTIVVKE 168 (168)
T ss_dssp GCEEEEEEEC
T ss_pred CCEEEEEEeC
Confidence 6889998863
No 133
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.67 E-value=0.022 Score=47.05 Aligned_cols=73 Identities=11% Similarity=-0.083 Sum_probs=45.5
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|.|+ |.+. .|-+++.. +.+.. ... .+.+.+|+...+.| +.||.|
T Consensus 22 ~i~V~~GdtV~f~--n~d~-~H~v~~~~----------~~~p~-~~~-----------~~~~~~g~t~~~tF--~~~G~y 74 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-GHNVETIK----------GMIPD-GAE-----------AFKSKINENYKVTF--TAPGVY 74 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-SCCCEECT----------TCSCT-TCC-----------CCBCCTTCCEEEEE--CSCEEE
T ss_pred EEEECCCCEEEEE--ECCC-CcEEEEcc----------cccCC-Ccc-----------eeecCCCCEEEEEe--CCCEEE
Confidence 4778999988875 5443 56655543 11110 000 11234677655555 899999
Q ss_pred eeeeccchhhhhccEEEEEEecCC
Q 042677 457 NLRSQLLKNWHLGQELYVRVYDAD 480 (504)
Q Consensus 457 ~~HCHil~H~~~Gm~~~~~V~~~~ 480 (504)
.|+|-+ |. .|-..+.|.+++
T Consensus 75 ~y~C~~--H~--~M~G~I~V~~~p 94 (122)
T 2ux6_A 75 GVKCTP--HP--FMVGVVQVGDAP 94 (122)
T ss_dssp EEEETT--EE--EEEEEEEESSSC
T ss_pred EEEeCC--Cc--cCEEEEEEeCCC
Confidence 999987 44 488899997644
No 134
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.38 E-value=0.1 Score=45.46 Aligned_cols=73 Identities=19% Similarity=0.246 Sum_probs=56.3
Q ss_pred EeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceeee
Q 042677 378 ATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWN 457 (504)
Q Consensus 378 ~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~ 457 (504)
+.++.|+.|++.+.|. +..|.|-+=.... -+.+.||....+.|.++.||.|.
T Consensus 95 l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi---------------------------k~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP-DVIHGFHVEGTNI---------------------------NVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEETTSEEEEEEECS-SSCEEEEETTSSC---------------------------EEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEeCCCeEEEEEecC-CceEEEEECCCCe---------------------------EEEecCCceeEEEEEeCCCEEEE
Confidence 6789999999999997 5667665532111 13355788888999999999999
Q ss_pred eeecc-chhhhhccEEEEEEec
Q 042677 458 LRSQL-LKNWHLGQELYVRVYD 478 (504)
Q Consensus 458 ~HCHi-l~H~~~Gm~~~~~V~~ 478 (504)
+.|.. -.+-|.+|-..+.|.+
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEEC
T ss_pred EECCcCCCCCcCCCEEEEEEeC
Confidence 99984 4577899999998863
No 135
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.29 E-value=0.1 Score=43.41 Aligned_cols=91 Identities=12% Similarity=0.023 Sum_probs=59.7
Q ss_pred EEee-eCCcEEEEEEEeCCCCc-----ceeeecCcceEEEeeccccCCcc--------ccCcCCC-CCC-CcccEEEeCC
Q 042677 377 VATG-IHRGWIEIVLKNELEVI-----DSWHLDGFGFYTVGYGIGDWNPQ--------LRSRYNL-YDP-VVRSTVQVYP 440 (504)
Q Consensus 377 ~~~~-~~g~~v~ivi~N~~~~~-----HP~HlHG~~F~Vv~~g~g~~~~~--------~~~~~~~-~~p-~~rDTv~vp~ 440 (504)
.+++ +.|+.|.++|.|.+..+ |- |-+...+. ..+. ....|-. .++ ....+..|.|
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~-------~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAMGHN-------LVLTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHCBC-------CEEEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred eEEEecCCCEEEEEEEECCCcccccCcce-------EEEcCccc--hhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 3778 88999999999998653 64 43433321 0000 0000100 011 1224556899
Q ss_pred CcEEEEEEEec--Ccee-eeeeeccchhhhhccEEEEEEe
Q 042677 441 GAWTAVYAYLD--NPGM-WNLRSQLLKNWHLGQELYVRVY 477 (504)
Q Consensus 441 ~g~~~irf~ad--npG~-w~~HCHil~H~~~Gm~~~~~V~ 477 (504)
|+...|-|.++ .||. +-|.|-+-.|.. ||-..+.|.
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 99999999998 7876 999999888888 898888885
No 136
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.79 E-value=0.11 Score=43.11 Aligned_cols=91 Identities=13% Similarity=0.015 Sum_probs=59.7
Q ss_pred EEee-eCCcEEEEEEEeCCCCc-----ceeeecCcceEEEeeccccCCcc--------ccCcCCC-CCC-CcccEEEeCC
Q 042677 377 VATG-IHRGWIEIVLKNELEVI-----DSWHLDGFGFYTVGYGIGDWNPQ--------LRSRYNL-YDP-VVRSTVQVYP 440 (504)
Q Consensus 377 ~~~~-~~g~~v~ivi~N~~~~~-----HP~HlHG~~F~Vv~~g~g~~~~~--------~~~~~~~-~~p-~~rDTv~vp~ 440 (504)
.+++ +.|+.|.+++.|.+..+ |-|- +...+. ..+. ....|-. .++ ....|..|.|
T Consensus 18 ~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~v-------i~~~~~--~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~p 88 (128)
T 2iaa_C 18 SIVVDKTCKEFTINLKHTGKLPKAAMGHNVV-------VSKKSD--ESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSCSCHHHHCBCCE-------EEETTH--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEEecCCcEEEEEEEECCCCcccCCCceEE-------Eccccc--hhhHHHhhhhccccccccccccchhhccceeeCC
Confidence 3678 78999999999998653 7443 322210 0000 0000100 111 1234556899
Q ss_pred CcEEEEEEEec--Ccee-eeeeeccchhhhhccEEEEEEe
Q 042677 441 GAWTAVYAYLD--NPGM-WNLRSQLLKNWHLGQELYVRVY 477 (504)
Q Consensus 441 ~g~~~irf~ad--npG~-w~~HCHil~H~~~Gm~~~~~V~ 477 (504)
|+...|.|.+. .||. +-|.|-+-.|+. ||-..+.|.
T Consensus 89 Ges~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 89 GETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999999998 8995 999999888888 899888885
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.69 E-value=0.14 Score=42.41 Aligned_cols=92 Identities=10% Similarity=-0.032 Sum_probs=59.0
Q ss_pred EEee-eCCcEEEEEEEeCCCCc-----ceeeecCcceEEEeeccc------cCCccccCcC-CCCCC-CcccEEEeCCCc
Q 042677 377 VATG-IHRGWIEIVLKNELEVI-----DSWHLDGFGFYTVGYGIG------DWNPQLRSRY-NLYDP-VVRSTVQVYPGA 442 (504)
Q Consensus 377 ~~~~-~~g~~v~ivi~N~~~~~-----HP~HlHG~~F~Vv~~g~g------~~~~~~~~~~-~~~~p-~~rDTv~vp~~g 442 (504)
.+++ +.|+.|.++|.|.+..+ |-|- +...+.. .........| .-.++ ....|-.|.||+
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~v-------i~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGe 91 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLV-------ISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGE 91 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCE-------EEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEE-------EccccchhhHHHHHhhccccccccccccchhheeeeeeCCCC
Confidence 3788 89999999999998653 7443 3322110 0000000001 00111 123444689999
Q ss_pred EEEEEEEec--Ccee-eeeeeccchhhhhccEEEEEE
Q 042677 443 WTAVYAYLD--NPGM-WNLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 443 ~~~irf~ad--npG~-w~~HCHil~H~~~Gm~~~~~V 476 (504)
...|.|.+. .||. +-|.|-+-.|+. ||-..+.|
T Consensus 92 t~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 92 KDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred EEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999997 7886 999999888888 89888877
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=93.44 E-value=0.38 Score=39.51 Aligned_cols=94 Identities=9% Similarity=-0.067 Sum_probs=57.7
Q ss_pred EEeeeC-CcEEEEEEEeCCCCcceeeecCcceEEEeeccc--cCCcc-c---cCcC-CC-CCCCcccEEEeCCCcEEEEE
Q 042677 377 VATGIH-RGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIG--DWNPQ-L---RSRY-NL-YDPVVRSTVQVYPGAWTAVY 447 (504)
Q Consensus 377 ~~~~~~-g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g--~~~~~-~---~~~~-~~-~~p~~rDTv~vp~~g~~~ir 447 (504)
-+.++. |+.|.++|.|.+..+ --.=||.|-+...+.- ..... . ...| +- +..+.-.|..|.||+...|.
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~p--~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNLP--KNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSCC--HHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred EEEEecCCCEEEEEEEECCccc--ccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 377876 999999999998652 0000234444432210 00000 0 0011 10 12345567789999999999
Q ss_pred EEec---CceeeeeeeccchhhhhccEEEEEE
Q 042677 448 AYLD---NPGMWNLRSQLLKNWHLGQELYVRV 476 (504)
Q Consensus 448 f~ad---npG~w~~HCHil~H~~~Gm~~~~~V 476 (504)
|.+. .+|.|-|-|- .|+ ||-..+.|
T Consensus 97 f~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp EEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred EeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 9987 8999999999 688 89888877
No 139
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=75.93 E-value=8.6 Score=36.47 Aligned_cols=77 Identities=13% Similarity=0.195 Sum_probs=57.3
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|++.+.+. +..|.|.+=.... . +.+-||....+.|.++.||.+
T Consensus 190 ~lvlP~g~~V~~~ltS~-DViHsf~iP~lg~------------------------k---~daiPG~~n~~~~~~~~~G~y 241 (298)
T 3hb3_B 190 PVVVPVGKKVLVQVTAT-DVIHAWTIPAFAV------------------------K---QDAVPGRIAQLWFSVDQEGVY 241 (298)
T ss_dssp CEEEESSSEEEEEEEES-SSCEEEEEGGGTE------------------------E---EEECTTCCEEEEEECSSSEEE
T ss_pred eEEEEcCCEEEEEEEeC-CccceeeEcccCc------------------------e---EEecCCceEEEEEEeCCCEEE
Confidence 47899999999999986 4557665532211 1 233467788899999999999
Q ss_pred eeeecc-chhhhhccEEEEEEecCCC
Q 042677 457 NLRSQL-LKNWHLGQELYVRVYDADP 481 (504)
Q Consensus 457 ~~HCHi-l~H~~~Gm~~~~~V~~~~~ 481 (504)
...|.- -..-|..|-..++|..+++
T Consensus 242 ~g~CsE~CG~~Hs~M~~~v~vvs~~~ 267 (298)
T 3hb3_B 242 FGQCSELCGINHAYMPIVVKAVSQEK 267 (298)
T ss_dssp EECCCSCCSTTTTSCCEEEEEECHHH
T ss_pred EEEcccccCcCccCCeeEEEEEcHHH
Confidence 999984 3467888999999886653
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=75.58 E-value=9.2 Score=34.05 Aligned_cols=73 Identities=14% Similarity=0.126 Sum_probs=52.9
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|++.|.+.+ ..|.| +|-+.+ =-+.+-||....+.|.++.||.|
T Consensus 42 ~l~lP~g~~V~~~lTS~D-ViHSF-------~IP~lg--------------------vK~daiPGr~n~l~~~~~~pG~y 93 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS-VMHSF-------FIPRLG--------------------SQIYAMAGMQTRLHLIANEPGTY 93 (205)
T ss_dssp EEEEETTSCEEEEEEESS-SCEEE-------EEGGGT--------------------EEEEECTTCCEEEEECCSSSEEE
T ss_pred eEEEeCCCEEEEEEecCC-ceeeE-------EecccC--------------------cEEEecCCceEEEEEEeCCCeEE
Confidence 478999999999999874 44644 442221 11233467888899999999999
Q ss_pred eeeeccc-hhhhhccEEEEEEe
Q 042677 457 NLRSQLL-KNWHLGQELYVRVY 477 (504)
Q Consensus 457 ~~HCHil-~H~~~Gm~~~~~V~ 477 (504)
...|--. .--|..|-+.++|.
T Consensus 94 ~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 94 DGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EEEECSCCSTTSTTCCEEEEEE
T ss_pred EEEcccccccchhhceEEEEEE
Confidence 9999853 34577888888887
No 141
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=70.95 E-value=39 Score=27.17 Aligned_cols=72 Identities=14% Similarity=0.280 Sum_probs=48.5
Q ss_pred cCCEE--EEEEEecCCCeeEEEEE-cCc--eeeEeecCCCccc--------ceeeceEEEcCCcEEEEEEEecC--CCce
Q 042677 164 KGKTY--RFRISNVGTAWSFNFRI-QNH--RMVLVETEGSYTN--------KIKLDSLDVHVGQSYSVLVTADK--NPAD 228 (504)
Q Consensus 164 ~G~~~--rlRliNa~~~~~~~~~i-~gh--~~~via~DG~~~~--------p~~~d~v~l~~geR~dv~v~~~~--~~g~ 228 (504)
.|+.+ .|.+.|.+... ..+.+ .|. .|.|...+|..+- ........|.|||...+-...++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~~-v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERA-IEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSC-EEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCc-EEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 44444 56678888755 35554 333 4555555565542 22456789999999999999884 5899
Q ss_pred eEEEEecc
Q 042677 229 YYIVASPK 236 (504)
Q Consensus 229 y~i~~~~~ 236 (504)
|.+.+.-.
T Consensus 95 Ytl~a~l~ 102 (120)
T 3isy_A 95 YEVKVTFK 102 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 99988754
No 142
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=70.27 E-value=14 Score=32.89 Aligned_cols=60 Identities=12% Similarity=0.196 Sum_probs=44.9
Q ss_pred ceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEEecc
Q 042677 158 ESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 158 p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
..+.+..|+.+||+|.+... .|.|.|......+ ..-||..-.+.+.++ .+|.|..+|...
T Consensus 41 n~l~lP~g~~V~~~lTS~DV--iHSF~IP~lgvK~----------------daiPGr~n~l~~~~~-~pG~y~g~CsE~ 100 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNSV--MHSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPGTYDGICAEI 100 (205)
T ss_dssp SEEEEETTSCEEEEEEESSS--CEEEEEGGGTEEE----------------EECTTCCEEEEECCS-SSEEEEEEECSC
T ss_pred ceEEEeCCCEEEEEEecCCc--eeeEEecccCcEE----------------EecCCceEEEEEEeC-CCeEEEEEcccc
Confidence 57899999999999988644 5566666554433 455677777777777 699999999853
No 143
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=68.83 E-value=13 Score=29.81 Aligned_cols=46 Identities=15% Similarity=0.341 Sum_probs=32.5
Q ss_pred EEEEEEEecCCCe-eEEEEEcCc-eeeEeecCCCcccceeeceEEEcCCcEEEEEEEe
Q 042677 167 TYRFRISNVGTAW-SFNFRIQNH-RMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTA 222 (504)
Q Consensus 167 ~~rlRliNa~~~~-~~~~~i~gh-~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~ 222 (504)
.|+|+|+|.+... .+.+.+.|. .++++. + ..+.+.+|+..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEE
Confidence 6999999999755 778888774 243322 1 13889999977766654
No 144
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=65.27 E-value=21 Score=33.17 Aligned_cols=76 Identities=16% Similarity=0.253 Sum_probs=54.9
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|++.+.+. +..|.|-+=.... ..| +-||....+.|.++.||.+
T Consensus 172 ~l~lP~g~~v~~~~tS~-DViHsf~ip~l~~------------------------k~d---a~PG~~n~~~~~~~~~G~y 223 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGA-DVIHSWTVPAFGV------------------------KQD---AVPGRLAQLWFRAEREGIF 223 (262)
T ss_dssp CEEEETTSEEEEEEEES-SSCEEEEEGGGTE------------------------EEE---ECBTCCEEEEEECCSCEEE
T ss_pred eEEEecCCEEEEEEEEC-cccceeeecccCc------------------------eEE---ecCCceeEEEEecCCcEEE
Confidence 47899999999999987 4456554432211 223 3467778889999999999
Q ss_pred eeeecc-chhhhhccEEEEEEecCC
Q 042677 457 NLRSQL-LKNWHLGQELYVRVYDAD 480 (504)
Q Consensus 457 ~~HCHi-l~H~~~Gm~~~~~V~~~~ 480 (504)
...|-- -.--|..|-..++|..++
T Consensus 224 ~g~Cse~CG~~H~~M~~~v~vv~~~ 248 (262)
T 2gsm_B 224 FGQCSELCGISHAYMPITVKVVSEE 248 (262)
T ss_dssp EECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEChHhcccCcccCeEEEEEEcHH
Confidence 999984 334578888888887654
No 145
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=52.76 E-value=36 Score=31.53 Aligned_cols=60 Identities=12% Similarity=0.159 Sum_probs=44.4
Q ss_pred ceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEEecc
Q 042677 158 ESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASPK 236 (504)
Q Consensus 158 p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~~ 236 (504)
..+.++.|+.+||++.+... .|.|.+.....++ ..-||..-.+.+.++ .+|.|..+|+..
T Consensus 171 n~l~lP~g~~v~~~~tS~DV--iHsf~ip~l~~k~----------------da~PG~~n~~~~~~~-~~G~y~g~Cse~ 230 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGADV--IHSWTVPAFGVKQ----------------DAVPGRLAQLWFRAE-REGIFFGQCSEL 230 (262)
T ss_dssp SCEEEETTSEEEEEEEESSS--CEEEEEGGGTEEE----------------EECBTCCEEEEEECC-SCEEEEECCCSC
T ss_pred ceEEEecCCEEEEEEEECcc--cceeeecccCceE----------------EecCCceeEEEEecC-CcEEEEEEChHh
Confidence 46999999999999987643 5667766554433 345677777777777 699999999853
No 146
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=52.24 E-value=38 Score=30.62 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=54.6
Q ss_pred EEEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCcee
Q 042677 376 FVATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGM 455 (504)
Q Consensus 376 ~~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~ 455 (504)
+.+.++.|+.|++.+.+. +..|.|-+=.... ..| .-||....+.|.++.||.
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~------------------------K~D---aiPGr~n~~~~~~~~~G~ 191 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGL------------------------KTD---AIPGRLNQTTLMSSRPGL 191 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEEEEEGGGTE------------------------EEE---ECTTCCEEEEECCSSCEE
T ss_pred ceEEEecCCEEEEEEEeC-cccceeeecccCc------------------------EEE---ecCCceEEEEEecCCcEE
Confidence 347899999999999986 4456554432111 233 335777788999999999
Q ss_pred eeeeeccc-hhhhhccEEEEEEecCC
Q 042677 456 WNLRSQLL-KNWHLGQELYVRVYDAD 480 (504)
Q Consensus 456 w~~HCHil-~H~~~Gm~~~~~V~~~~ 480 (504)
+...|.-. .--|.-|-..++|..++
T Consensus 192 y~g~Cse~CG~~Hs~M~~~v~vv~~~ 217 (227)
T 1v54_B 192 YYGQCSEICGSNHSFMPIVLELVPLK 217 (227)
T ss_dssp EEECCCSCCSTTGGGCCEEEEEECHH
T ss_pred EEEEehhhcccccccCeEEEEEEcHH
Confidence 99999743 34577888888887554
No 147
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=48.20 E-value=47 Score=31.37 Aligned_cols=59 Identities=15% Similarity=0.215 Sum_probs=44.7
Q ss_pred ceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEEec
Q 042677 158 ESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASP 235 (504)
Q Consensus 158 p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~ 235 (504)
..+.+..|+.+||++.+... .|.|.+.....++ ..-||..-.+.+.++ .+|.|..+|..
T Consensus 189 N~lvlP~g~~V~~~ltS~DV--iHsf~iP~lg~k~----------------daiPG~~n~~~~~~~-~~G~y~g~CsE 247 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATDV--IHAWTIPAFAVKQ----------------DAVPGRIAQLWFSVD-QEGVYFGQCSE 247 (298)
T ss_dssp SCEEEESSSEEEEEEEESSS--CEEEEEGGGTEEE----------------EECTTCCEEEEEECS-SSEEEEECCCS
T ss_pred ceEEEEcCCEEEEEEEeCCc--cceeeEcccCceE----------------EecCCceEEEEEEeC-CCEEEEEEccc
Confidence 57999999999999998554 5566666554433 355777777788887 69999999985
No 148
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=45.13 E-value=64 Score=25.92 Aligned_cols=62 Identities=13% Similarity=0.217 Sum_probs=41.5
Q ss_pred eEEEEEEeCCCCCeeeeeC-CcCC----------CCCCCCCCCccc----CCcCCCCCeEEEEEEeCC--Cceeeeeec
Q 042677 14 MIHVNVFNKMDEPLLFTWN-GIQQ----------RLNSWQDGVSGT----NCPIQPGTNWTYVFQTKD--QIGSFFYFP 75 (504)
Q Consensus 14 ~v~i~v~N~l~~~~siH~H-G~~~----------~~~~~~DG~~~~----~~~i~pg~~~~y~~~~~~--~~Gt~wYH~ 75 (504)
.+.++|+|....+.++.+. |... ..=-|+||-... ...|.||++.+|+...++ .+|+|..+.
T Consensus 21 ~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a 99 (120)
T 3isy_A 21 KFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKV 99 (120)
T ss_dssp EEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEE
T ss_pred EEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEE
Confidence 4567788998887777764 3321 011236666543 445999999999999963 489997653
No 149
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=44.25 E-value=34 Score=27.81 Aligned_cols=58 Identities=9% Similarity=0.179 Sum_probs=33.4
Q ss_pred EEcCCCeEEEEEE---eCCCCCe--eeee--CCcCCCC-CCCCCCCcccCCcCCCCCeEEEEEEeC
Q 042677 8 NCSTDDMIHVNVF---NKMDEPL--LFTW--NGIQQRL-NSWQDGVSGTNCPIQPGTNWTYVFQTK 65 (504)
Q Consensus 8 ~~~~Gd~v~i~v~---N~l~~~~--siH~--HG~~~~~-~~~~DG~~~~~~~i~pg~~~~y~~~~~ 65 (504)
.++.|..+.+.+. |...... .+|+ .|+.... ....|+=-++.|||.+|+.++|.+.++
T Consensus 28 ~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 28 IIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHFMKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp EEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGTSCSSBCTTCEEEEEEEEE
T ss_pred EEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCCccCcccCCEEEEEEEEeE
Confidence 4677888877776 2222222 2332 3443321 112343333479999999999997763
No 150
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=39.84 E-value=1.5e+02 Score=24.12 Aligned_cols=65 Identities=8% Similarity=0.196 Sum_probs=39.9
Q ss_pred CCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCC--------cccCCcCCCCCeEEEEEEeCCCceee
Q 042677 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGV--------SGTNCPIQPGTNWTYVFQTKDQIGSF 71 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~--------~~~~~~i~pg~~~~y~~~~~~~~Gt~ 71 (504)
|-+|+++.||++.|.|.-+-+.+++=...... +....|++ |.-.-.+..|+...+.|++ .++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~~--~~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A-~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGGT--KESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTV-KAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTTB--SSCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEE-CSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecCC--CccccccceeecceeeeCCCCCcCCCcEEEEEEEE-ccCceE
Confidence 45899999999999999776554444433221 11122332 1001235677888999996 568864
No 151
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=39.78 E-value=38 Score=28.02 Aligned_cols=35 Identities=23% Similarity=0.218 Sum_probs=29.6
Q ss_pred EEEe-cCceeeeeeeccchhhhhccEEEEEEecCCC
Q 042677 447 YAYL-DNPGMWNLRSQLLKNWHLGQELYVRVYDADP 481 (504)
Q Consensus 447 rf~a-dnpG~w~~HCHil~H~~~Gm~~~~~V~~~~~ 481 (504)
+|.. +.+|.+.|=|=...|...||-+.++|.....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 3556 8899999999999999999999999986653
No 152
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=39.32 E-value=35 Score=26.58 Aligned_cols=53 Identities=13% Similarity=-0.016 Sum_probs=35.8
Q ss_pred CeEEEEEEeCCCC---CeeeeeCCcCCCCCCCCCCCccc-CCcCCCCCeEEEEEEe-CCCceee
Q 042677 13 DMIHVNVFNKMDE---PLLFTWNGIQQRLNSWQDGVSGT-NCPIQPGTNWTYVFQT-KDQIGSF 71 (504)
Q Consensus 13 d~v~i~v~N~l~~---~~siH~HG~~~~~~~~~DG~~~~-~~~i~pg~~~~y~~~~-~~~~Gt~ 71 (504)
=.+.|+|+|-|+. ...++..|.-. ..+ --+ ...|.||++..+++.. |..+|..
T Consensus 22 l~v~vsf~NPL~~~L~~c~~~vEG~GL-----~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 22 CEVQIVFKNPLPVTLTNVVFRLEGSGL-----QRP-KILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEEECCSSSCBCSEEEEEEETTT-----EEE-EEEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEEECCCCCcccCEEEEEECCCC-----Ccc-eEEEcCcCCCCCEEEEEEEEecCcccce
Confidence 3578899999965 34677766422 222 112 4569999999999988 5667764
No 153
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=38.73 E-value=28 Score=27.84 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=27.9
Q ss_pred EEEecCceeeeeeeccchhhhhccEEEE-EEecCC
Q 042677 447 YAYLDNPGMWNLRSQLLKNWHLGQELYV-RVYDAD 480 (504)
Q Consensus 447 rf~adnpG~w~~HCHil~H~~~Gm~~~~-~V~~~~ 480 (504)
+|..+.+|...|=|=...|...||-+.+ .|..+.
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 4566889999999999999999999999 776543
No 154
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=36.91 E-value=81 Score=25.03 Aligned_cols=67 Identities=7% Similarity=0.073 Sum_probs=40.6
Q ss_pred CCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcc----c-----CCcCCCCCeEEEEEEeCCCceee
Q 042677 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSG----T-----NCPIQPGTNWTYVFQTKDQIGSF 71 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~----~-----~~~i~pg~~~~y~~~~~~~~Gt~ 71 (504)
|-+|.++.||++.|.|.-+-+.+++=......-...-..+|.-. + .-.+..|+...+.|++ .++|+.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~~ 89 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGHH 89 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSSE
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCceE
Confidence 55899999999999999876666555554311000001122111 0 1225678899999997 567764
No 155
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=36.14 E-value=1.7e+02 Score=27.05 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=43.2
Q ss_pred ceEEEecCCEEEE-------EEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeE
Q 042677 158 ESFTVTKGKTYRF-------RISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYY 230 (504)
Q Consensus 158 p~~~v~~G~~~rl-------RliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~ 230 (504)
..+++++|+++.+ =|||.+... .+.++|..+.+++.=-..-+...-+.|.|+.|. +|.|++. .+.++.
T Consensus 32 ~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~--~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~--~v~i~a~-~~~~~~ 106 (270)
T 2qjv_A 32 DVWQLXAGESITLPSDERERCLVLVAGLA--SVXAADSFFYRIGQRMSPFERIPAYSVYLPHHT--EAXVTAE-TDLELA 106 (270)
T ss_dssp EEEEECTTCEEEECCSSEEEEEEEEESCE--EEEETTEEEEEECCCSSGGGCSCCCEEEECSSC--CEEEEES-SSEEEE
T ss_pred EEEEecCCCEEEecCCCcEEEEEEecceE--EEEECCEEEeccccccccccCCCCcEEEECCCC--EEEEEec-CCceEE
Confidence 3556666665544 366666544 566677777665322111122224789999999 6666666 356777
Q ss_pred EEEecc
Q 042677 231 IVASPK 236 (504)
Q Consensus 231 i~~~~~ 236 (504)
+-....
T Consensus 107 v~sAp~ 112 (270)
T 2qjv_A 107 VCSAPG 112 (270)
T ss_dssp EEEEEC
T ss_pred EEeeec
Confidence 766543
No 156
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=35.17 E-value=28 Score=26.79 Aligned_cols=68 Identities=12% Similarity=0.186 Sum_probs=37.3
Q ss_pred EecCCEEEEEEEecCCCeeEEEEEcC--ceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecC--CCceeEEEEec
Q 042677 162 VTKGKTYRFRISNVGTAWSFNFRIQN--HRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADK--NPADYYIVASP 235 (504)
Q Consensus 162 v~~G~~~rlRliNa~~~~~~~~~i~g--h~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~--~~g~y~i~~~~ 235 (504)
-++|+++++|++-...... . ..+ -.+++..-+|..+.-. .........++..+..+. ..|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~-p--~~~~~~~v~l~dp~g~~v~~~---~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFH-P--LNELIPLVYIQDPKGNRIAQW---QSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGC-B--CCCEEEEEEEECTTSCEEEEE---EEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCc-C--CCCCceEEEEECCCCCEEEEE---EeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 4799999999775543221 1 111 1345555566533221 122233455666666644 46899998874
No 157
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=35.05 E-value=79 Score=28.49 Aligned_cols=59 Identities=15% Similarity=0.200 Sum_probs=42.8
Q ss_pred ceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEEec
Q 042677 158 ESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASP 235 (504)
Q Consensus 158 p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~ 235 (504)
..+.+..|+.+|+++..+.. .|.+.+....+++ ..-||..-.+-+.++ .+|.|..+|+.
T Consensus 140 n~lvlP~~~~Vr~~vtS~DV--iHsf~vP~lg~K~----------------DaiPGr~n~~~~~~~-~~G~y~g~Cse 198 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSEDV--LHSWAVPSLGLKT----------------DAIPGRLNQTTLMSS-RPGLYYGQCSE 198 (227)
T ss_dssp SCEEEETTSCEEEEEEESSS--CEEEEEGGGTEEE----------------EECTTCCEEEEECCS-SCEEEEECCCS
T ss_pred ceEEEecCCEEEEEEEeCcc--cceeeecccCcEE----------------EecCCceEEEEEecC-CcEEEEEEehh
Confidence 57999999999999987544 5566666554433 344666666677777 69999999975
No 158
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=34.83 E-value=30 Score=27.67 Aligned_cols=35 Identities=11% Similarity=0.057 Sum_probs=28.0
Q ss_pred EEEEeCCCceeeeeecchhhhhhCCccccE-EEeCCC
Q 042677 60 YVFQTKDQIGSFFYFPSINFQKAGGGFGPI-RINNRI 95 (504)
Q Consensus 60 y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~l-iV~~~~ 95 (504)
..+.+ +.+|++||-|-...+=..||..++ .|....
T Consensus 72 ~~v~l-~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 72 VKIML-NTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp EEEEC-CSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred eEEEE-CCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 46776 679999999998888888999999 887643
No 159
>2yev_B Cytochrome C oxidase subunit 2; electron transport; HET: FME 5PL HAS 4AG 7E8 HEC 7E9; 2.36A {Thermus thermophilus}
Probab=40.81 E-value=8.3 Score=37.39 Aligned_cols=77 Identities=19% Similarity=0.143 Sum_probs=52.6
Q ss_pred EEeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceee
Q 042677 377 VATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMW 456 (504)
Q Consensus 377 ~~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w 456 (504)
.+.++.|+.|++.+.+.+ ..| .|+|-+.+. ..|. -||....+.|.++.||.|
T Consensus 142 ~l~~P~~~~v~~~~ts~D-ViH-------sf~vp~~~~-----------------k~d~---~PG~~~~~~~~~~~~G~y 193 (337)
T 2yev_B 142 ELVLPAGVPVELEITSKD-VIH-------SFWVPGLAG-----------------KRDA---IPGQTTRISFEPKEPGLY 193 (337)
Confidence 367889999999888754 345 455543321 2343 357777889999999999
Q ss_pred eeeeccch-hhhhccEEEEEEecCCC
Q 042677 457 NLRSQLLK-NWHLGQELYVRVYDADP 481 (504)
Q Consensus 457 ~~HCHil~-H~~~Gm~~~~~V~~~~~ 481 (504)
.-.|--.- --|..|...+++..+++
T Consensus 194 ~g~c~e~cG~~Hs~M~~~v~~vs~~~ 219 (337)
T 2yev_B 194 YGFCAELCGASHARMLFRVVVLPKEE 219 (337)
Confidence 99998543 34666777777766654
No 160
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=33.33 E-value=39 Score=27.47 Aligned_cols=47 Identities=19% Similarity=0.304 Sum_probs=27.1
Q ss_pred EEEEEeCCCCCe---eeeeCCcCCCCC-CC--CCCCcccCCcCCCCCeEEEEE
Q 042677 16 HVNVFNKMDEPL---LFTWNGIQQRLN-SW--QDGVSGTNCPIQPGTNWTYVF 62 (504)
Q Consensus 16 ~i~v~N~l~~~~---siH~HG~~~~~~-~~--~DG~~~~~~~i~pg~~~~y~~ 62 (504)
.|++.|....+. +=||.=....+. .. -+||-|-|.-|.||++|.|.=
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeC
Confidence 588888876543 567763321111 11 234333356689999888854
No 161
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=32.29 E-value=38 Score=32.30 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=51.2
Q ss_pred EeeeCCcEEEEEEEeCCCCcceeeecCcceEEEeeccccCCccccCcCCCCCCCcccEEEeCCCcEEEEEEEecCceeee
Q 042677 378 ATGIHRGWIEIVLKNELEVIDSWHLDGFGFYTVGYGIGDWNPQLRSRYNLYDPVVRSTVQVYPGAWTAVYAYLDNPGMWN 457 (504)
Q Consensus 378 ~~~~~g~~v~ivi~N~~~~~HP~HlHG~~F~Vv~~g~g~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~ 457 (504)
+.++.|+.|++.+.+. +..|.|.+=.... ..| +-||-...+.|.++.||.+.
T Consensus 153 l~lP~g~~V~~~lTS~-DViHsf~IP~lg~------------------------k~D---aiPGr~n~~~~~~~~~G~y~ 204 (315)
T 1fft_B 153 IAFPANTPVYFKVTSN-SVMNSFFIPRLGS------------------------QIY---AMAGMQTRLHLIANEPGTYD 204 (315)
T ss_dssp CCCCSSSEEEEEECBS-SSCEEEEEGGGTE------------------------EEE---ECBTSCEEEEEECCSCBCCE
T ss_pred EEEeCCCEEEEEEEeC-CccceeeecccCc------------------------EEe---ecCCcceeeEEecCCCeEEE
Confidence 6788999999988876 4456554432211 223 34677788899999999999
Q ss_pred eeeccc-hhhhhccEEEEEEe
Q 042677 458 LRSQLL-KNWHLGQELYVRVY 477 (504)
Q Consensus 458 ~HCHil-~H~~~Gm~~~~~V~ 477 (504)
..|--. .--|..|-+.++|.
T Consensus 205 g~CsE~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 205 GISASYSGPGFSGMKFKAIAT 225 (315)
T ss_dssp EBCCSCCSTTTTTCCEECCBC
T ss_pred EeccccchhhHHhccceEEEe
Confidence 999743 34577788888777
No 162
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=31.51 E-value=44 Score=26.34 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=28.2
Q ss_pred EEEecCceeeeeeeccchhhhhccEEEEEEecC
Q 042677 447 YAYLDNPGMWNLRSQLLKNWHLGQELYVRVYDA 479 (504)
Q Consensus 447 rf~adnpG~w~~HCHil~H~~~Gm~~~~~V~~~ 479 (504)
+|..+.+|...|=|=...|...||-+.+.|...
T Consensus 73 ~v~L~~~G~~yFic~~~gHC~~GmKl~I~V~~~ 105 (109)
T 1ws8_A 73 SIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPG 105 (109)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEECC-
T ss_pred EEEECCCcCEEEECCCCCcccCCCEEEEEEcCC
Confidence 356689999999999999999999999998644
No 163
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=30.42 E-value=39 Score=27.43 Aligned_cols=55 Identities=20% Similarity=0.282 Sum_probs=30.3
Q ss_pred EEEEEeCCCCCe---eeeeCCcCCCCC-CC--CCCCcccCCcCCCCCeEEEEEEe--CCCcee
Q 042677 16 HVNVFNKMDEPL---LFTWNGIQQRLN-SW--QDGVSGTNCPIQPGTNWTYVFQT--KDQIGS 70 (504)
Q Consensus 16 ~i~v~N~l~~~~---siH~HG~~~~~~-~~--~DG~~~~~~~i~pg~~~~y~~~~--~~~~Gt 70 (504)
.|++.|....+. +=||.=....+. .. -+||-|-|.-|.||++|.|.=-. ..+.|+
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg~~L~tp~G~ 95 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALDTPVGV 95 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEEEEESSSEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCCcCcCCCcEE
Confidence 688889876553 567763321111 11 23333325668999988886433 234554
No 164
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=29.96 E-value=73 Score=25.76 Aligned_cols=58 Identities=24% Similarity=0.333 Sum_probs=33.9
Q ss_pred EEcCCCeEEEEEE---eCCCCCeeeeeC----CcCCC-CCCCCCCCc-ccCCcCCCCCeEEEEEEeC
Q 042677 8 NCSTDDMIHVNVF---NKMDEPLLFTWN----GIQQR-LNSWQDGVS-GTNCPIQPGTNWTYVFQTK 65 (504)
Q Consensus 8 ~~~~Gd~v~i~v~---N~l~~~~siH~H----G~~~~-~~~~~DG~~-~~~~~i~pg~~~~y~~~~~ 65 (504)
.++.|..+.+.+. |..........| |+... ..+..|+=. ++.|||.+|+.++|.+.++
T Consensus 29 ~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 29 KLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 4677888777776 332222233333 43332 112234432 3479999999999998875
No 165
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=29.52 E-value=49 Score=27.36 Aligned_cols=55 Identities=22% Similarity=0.291 Sum_probs=30.2
Q ss_pred EEEEEeCCCCCe---eeeeCCcCCCCC-CC--CCCCcccCCcCCCCCeEEEEEEe--CCCcee
Q 042677 16 HVNVFNKMDEPL---LFTWNGIQQRLN-SW--QDGVSGTNCPIQPGTNWTYVFQT--KDQIGS 70 (504)
Q Consensus 16 ~i~v~N~l~~~~---siH~HG~~~~~~-~~--~DG~~~~~~~i~pg~~~~y~~~~--~~~~Gt 70 (504)
.|++.|....+. +=||.=....+. .. -+||-|-|.-|.||++|.|.=-. +.+.|+
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg~~L~Tp~G~ 100 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSGCPLPTPIGT 100 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEEEEESSSEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCCcCcCCCceE
Confidence 578888876543 557753321111 01 13333325568999988886433 234554
No 166
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=27.97 E-value=61 Score=30.85 Aligned_cols=59 Identities=12% Similarity=0.188 Sum_probs=43.0
Q ss_pred ceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEEec
Q 042677 158 ESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASP 235 (504)
Q Consensus 158 p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~ 235 (504)
..+.+..|+.+||++.... -.|.|.+.....++ ..-||..-.+-+.++ .+|.|..+|..
T Consensus 151 n~l~lP~g~~V~~~lTS~D--ViHsf~IP~lg~k~----------------DaiPGr~n~~~~~~~-~~G~y~g~CsE 209 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSNS--VMNSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPGTYDGISAS 209 (315)
T ss_dssp SBCCCCSSSEEEEEECBSS--SCEEEEEGGGTEEE----------------EECBTSCEEEEEECC-SCBCCEEBCCS
T ss_pred ceEEEeCCCEEEEEEEeCC--ccceeeecccCcEE----------------eecCCcceeeEEecC-CCeEEEEeccc
Confidence 4688999999999987554 45666666554433 355677777777777 79999999975
No 167
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=26.81 E-value=2.1e+02 Score=22.76 Aligned_cols=65 Identities=8% Similarity=0.120 Sum_probs=39.4
Q ss_pred CCeEEEcCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCC--------ccc-C--------CcCCCCCeEEEEEEeCC
Q 042677 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGV--------SGT-N--------CPIQPGTNWTYVFQTKD 66 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~--------~~~-~--------~~i~pg~~~~y~~~~~~ 66 (504)
|-+|.++.||++.|.|.-+-+.+++=...+..- ....||. |-. . ..+..|+...+.|++ .
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPtTGY~W~~~~~~~--~~l~~~~~~v~~~y~~~~~~~~~~~~~~~~vG~gG~~~~~fka-~ 88 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPTTGYTWLRSGLAG--TELSDCTFAIQSKFNNRAPHDNHKNHRRLLVGAGGTMVLEVKA-L 88 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCeEEEEecCcc--ccCCCccEEEeeeEEcCCCCcccccccccEeCCCceEEEEEEE-e
Confidence 457999999999999987665555544444210 0012221 000 0 135667888888886 5
Q ss_pred Cceee
Q 042677 67 QIGSF 71 (504)
Q Consensus 67 ~~Gt~ 71 (504)
++|++
T Consensus 89 ~~G~~ 93 (121)
T 2cio_B 89 KAGKH 93 (121)
T ss_pred cCceE
Confidence 68874
No 168
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=26.46 E-value=96 Score=25.10 Aligned_cols=50 Identities=14% Similarity=0.335 Sum_probs=26.5
Q ss_pred EEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc--c--ceeeceEEEcCCcEEEEE
Q 042677 167 TYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT--N--KIKLDSLDVHVGQSYSVL 219 (504)
Q Consensus 167 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~--~--p~~~d~v~l~~geR~dv~ 219 (504)
.|++||-|.+... ..|-...+.|...||..- + .+.-..=.|.|||.+...
T Consensus 31 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 84 (126)
T 1xvs_A 31 AYLITIKNLSSQT---VQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYS 84 (126)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEE
T ss_pred EEEEEEEECCCCC---EEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEe
Confidence 4789999998754 234344444444444321 1 111122247788766544
No 169
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=26.28 E-value=2.5e+02 Score=26.92 Aligned_cols=70 Identities=16% Similarity=0.148 Sum_probs=42.8
Q ss_pred CEEEEEEEecCCCeeEEEE---EcCc---eeeEeecCCCccc----------ceeeceEEEcCCcEEEEEEEecC-----
Q 042677 166 KTYRFRISNVGTAWSFNFR---IQNH---RMVLVETEGSYTN----------KIKLDSLDVHVGQSYSVLVTADK----- 224 (504)
Q Consensus 166 ~~~rlRliNa~~~~~~~~~---i~gh---~~~via~DG~~~~----------p~~~d~v~l~~geR~dv~v~~~~----- 224 (504)
-++..-|-|.+....--|. +|+. .|.| ..||..++ |..-+-+.|.|||.+++.++...
T Consensus 38 ~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs 116 (343)
T 2x3c_A 38 VRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMS 116 (343)
T ss_dssp CEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCC
T ss_pred eEEEEEEEeCCCCceEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccC
Confidence 4556667777765421111 2222 3444 45665432 22346788999999999999864
Q ss_pred CCceeEEEEecc
Q 042677 225 NPADYYIVASPK 236 (504)
Q Consensus 225 ~~g~y~i~~~~~ 236 (504)
.+|.|.+++...
T Consensus 117 ~gG~y~v~~~g~ 128 (343)
T 2x3c_A 117 AQGQYSIRYQLP 128 (343)
T ss_dssp SCEEEEEEEC--
T ss_pred CCceEEEEEeee
Confidence 468999998754
No 170
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=26.25 E-value=23 Score=28.86 Aligned_cols=23 Identities=30% Similarity=0.512 Sum_probs=19.0
Q ss_pred ceEEEecCCEEEEEEEecCCCee
Q 042677 158 ESFTVTKGKTYRFRISNVGTAWS 180 (504)
Q Consensus 158 p~~~v~~G~~~rlRliNa~~~~~ 180 (504)
-.++|++||++||.+.|-+....
T Consensus 71 k~InV~~GETVrF~v~nkt~~W~ 93 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVAWT 93 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEEEE
Confidence 45999999999999988876443
No 171
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=24.31 E-value=2.8e+02 Score=22.27 Aligned_cols=66 Identities=12% Similarity=0.062 Sum_probs=42.6
Q ss_pred EEecCCEE--EEEEEecCCCeeEEEEEcCceeeEeecCCCcccceeeceEEEcCCcEEEEEEEecC-CCceeEEEEec
Q 042677 161 TVTKGKTY--RFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADK-NPADYYIVASP 235 (504)
Q Consensus 161 ~v~~G~~~--rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~-~~g~y~i~~~~ 235 (504)
.+.+|+.+ +..+-|.|....-.+. ..++ .||..+. ...+.|.+|+.-.|.+.... .+|.|.|.+..
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~-----V~ly-vng~~v~---t~~v~La~G~s~tv~f~~~~~~~G~~~v~AvV 96 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTK-----VRVY-INGTLYK---NWTVSLGPKEEKVLTFNWTPTQEGMYRINATV 96 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEE-----EEEE-ETTEEEE---EEEEEECTTCEEEEEEEECCSSCEEEEEEEEE
T ss_pred cccCCCEEEEEEEEEECCCCccCCcE-----EEEE-ECCEEEe---eEEeccCCCCeEEEEEEEEcCCCcEEEEEEEE
Confidence 77888876 5668899976532222 2222 2665442 22457999999888887643 57889888753
No 172
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=24.07 E-value=1e+02 Score=25.19 Aligned_cols=51 Identities=12% Similarity=0.310 Sum_probs=26.7
Q ss_pred EEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc--c--ceeeceEEEcCCcEEEEEE
Q 042677 167 TYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT--N--KIKLDSLDVHVGQSYSVLV 220 (504)
Q Consensus 167 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~--~--p~~~d~v~l~~geR~dv~v 220 (504)
.|++||-|.+... +.|-...+.|...||..- + .+.-..=.|.|||.+...=
T Consensus 31 aY~ItI~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtS 85 (134)
T 1tza_A 31 SYTITIINLGEQA---AKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTS 85 (134)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcC
Confidence 4789999998754 233334444444444321 1 1111222478888665543
No 173
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=23.96 E-value=1.1e+02 Score=24.75 Aligned_cols=50 Identities=16% Similarity=0.305 Sum_probs=25.1
Q ss_pred EEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc--c--ceeeceEEEcCCcEEEEE
Q 042677 167 TYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT--N--KIKLDSLDVHVGQSYSVL 219 (504)
Q Consensus 167 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~--~--p~~~d~v~l~~geR~dv~ 219 (504)
.|++||-|.+.... .|-...+.|...||..- + .+.-..=.|.|||.+...
T Consensus 32 aY~I~I~N~~~~~v---QL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 85 (127)
T 2f1e_A 32 AYSIRIQNAGAVPA---RLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYT 85 (127)
T ss_dssp EEEEEEEECSSSCE---EEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEE
T ss_pred EEEEEEEeCCCCCE---EEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEe
Confidence 47899999887542 33333344434443321 0 111112237888866554
No 174
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=23.91 E-value=2.6e+02 Score=23.85 Aligned_cols=84 Identities=12% Similarity=0.048 Sum_probs=47.1
Q ss_pred eEEEccccCCCCCCCCCcceEEEecCCEEEEEEEecCCCeeEEEEEcCceeeEeecCCCccccee----eceE--E-EcC
Q 042677 140 WMLMNGKVSLMNPNTTEHESFTVTKGKTYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYTNKIK----LDSL--D-VHV 212 (504)
Q Consensus 140 ~~liNG~~~~~~~~~~~~p~~~v~~G~~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~~p~~----~d~v--~-l~~ 212 (504)
..+.|..+. +.-.+..|+.++||+-=......-.+. -.|.|-..+|..+-... ...+ . +.+
T Consensus 53 v~l~d~~G~---------~~~~~~~Ge~v~l~i~~~~~~~i~~~v---~G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~ 120 (188)
T 2r5o_A 53 YHIQSAGVD---------FPPSLTGNQQTDFLMKVVFEYDFDCVV---PGILIKTLDGLFLYGTNSFLASEGRENISVSR 120 (188)
T ss_dssp EEEEETTEE---------SCSSEETTCEEEEEEEEEESSCEEEEE---EEEEEEETTCCEEEEEEHHHHTTTCCCEEECT
T ss_pred EEEEECCCC---------EeeEEeCCCEEEEEEEEEECCcCCccE---EEEEEECCCCCEEEecCcccccccccccccCC
Confidence 445565554 445688899888776554433211111 13455566666552211 1112 3 678
Q ss_pred CcEEEEEEEec--CCCceeEEEEec
Q 042677 213 GQSYSVLVTAD--KNPADYYIVASP 235 (504)
Q Consensus 213 geR~dv~v~~~--~~~g~y~i~~~~ 235 (504)
|+.+.+.+.++ =.+|+|.|.+.-
T Consensus 121 G~~~~v~f~f~l~L~~G~Y~lsv~i 145 (188)
T 2r5o_A 121 GDVRVFKFSLPVDLNSGDYLLSFGI 145 (188)
T ss_dssp TCEEEEEEEEECCBCSEEEEEEEEE
T ss_pred CCEEEEEEEEecccCCCeEEEEEEE
Confidence 99765555443 368999998763
No 175
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=23.54 E-value=2.3e+02 Score=20.99 Aligned_cols=45 Identities=11% Similarity=0.181 Sum_probs=33.3
Q ss_pred eeeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEE
Q 042677 189 RMVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVA 233 (504)
Q Consensus 189 ~~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~ 233 (504)
.++|+..||.+++...++.=.+.-+|-|.+........|.+.+.+
T Consensus 4 ~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~ 48 (82)
T 3e8v_A 4 SVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTA 48 (82)
T ss_dssp EEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEEC
T ss_pred EEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEEE
Confidence 568889999998877776655666888888777655677776655
No 176
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=23.18 E-value=37 Score=33.09 Aligned_cols=40 Identities=8% Similarity=0.241 Sum_probs=26.9
Q ss_pred CCCCccc-CCcCCCCCeEEEEEEe-CCCceeeeeecchhhhhhC
Q 042677 42 QDGVSGT-NCPIQPGTNWTYVFQT-KDQIGSFFYFPSINFQKAG 83 (504)
Q Consensus 42 ~DG~~~~-~~~i~pg~~~~y~~~~-~~~~Gt~wYH~H~~~~~~~ 83 (504)
.-|.|.. ...|..|+.|.|+..+ +..+|+| |-|...++.+
T Consensus 101 ing~p~~~s~~l~~G~~Y~fki~lkaR~PG~~--HVH~~lNV~~ 142 (419)
T 3rfr_A 101 IGEQFAPRSVSLEIGKDYAFSINLRGRRAGRW--HVHAQINVEG 142 (419)
T ss_dssp ETTEECSSCBCCCTTCEEEEEEEEEECSCEEE--EEEEEEEETT
T ss_pred hcCcCCcceEEecCCCeEeEEEEEecccCccc--ccceeEeecc
Confidence 3444444 5568999999999887 3579997 5555444443
No 177
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=22.80 E-value=1.2e+02 Score=25.08 Aligned_cols=50 Identities=14% Similarity=0.278 Sum_probs=25.3
Q ss_pred EEEEEEEecCCCeeEEEEEcCceeeEeecCCCcc--c--ceeeceEEEcCCcEEEEE
Q 042677 167 TYRFRISNVGTAWSFNFRIQNHRMVLVETEGSYT--N--KIKLDSLDVHVGQSYSVL 219 (504)
Q Consensus 167 ~~rlRliNa~~~~~~~~~i~gh~~~via~DG~~~--~--p~~~d~v~l~~geR~dv~ 219 (504)
.|++||-|.+.... .|-...+.|...||..- + .+.-..=.|.|||.+...
T Consensus 36 aY~ItI~N~~~~~v---QL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~Yt 89 (139)
T 1xq4_A 36 AYTVRITNTGSHPA---QVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEEEECSSSCE---EEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEE
T ss_pred EEEEEEEeCCCCCE---EEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEc
Confidence 47899999887542 33333344444444321 0 111122247888866554
No 178
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=22.52 E-value=3.1e+02 Score=22.17 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=43.5
Q ss_pred ceEEEecCCEEEEEEE-ecCCCeeEEEEEcCce-eeEeecCCCcccceeeceEEEcCCcEEEEEEEecCCCceeEEEEec
Q 042677 158 ESFTVTKGKTYRFRIS-NVGTAWSFNFRIQNHR-MVLVETEGSYTNKIKLDSLDVHVGQSYSVLVTADKNPADYYIVASP 235 (504)
Q Consensus 158 p~~~v~~G~~~rlRli-Na~~~~~~~~~i~gh~-~~via~DG~~~~p~~~d~v~l~~geR~dv~v~~~~~~g~y~i~~~~ 235 (504)
-.++++.|++..++|- |.++-....+....-. +..+.-+ .+ +|...+.-.++.|....+.|++. .+|...|.+..
T Consensus 35 ~tI~v~~Ge~~~I~L~~NPTTGY~W~~~~~~~~vl~~l~~~-~y-~~~~~~~~~vGagG~~~w~f~A~-~~G~~~i~~~Y 111 (132)
T 2wgn_B 35 SPLKLTQGQELVLTLPSNPTTGFRWELRNPAASVLKRLGPE-VY-SNSEEDSGLVGSGGESTWRFRVA-ASGDDRLELVY 111 (132)
T ss_dssp SCEEECTTCEEEEEECCCTTTSCEEEEEECCTTTEEECCSC-CS-CSSCSSCCCSSSSCCEEEEEEEC-SCEEEEEEEEE
T ss_pred cEEEEcCCCEEEEEeCCCCCCCeEEEEecCCCceEEecccc-ee-cCCCCccCCcCCCceEEEEEEEc-CCceEEEEEEE
Confidence 3589999998888875 4555444444443322 2222211 12 22212333577777888888887 57887776653
No 179
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=22.37 E-value=75 Score=24.95 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=27.6
Q ss_pred EEEEeCCCceeeeeecchhhhhhCCccccEEEeCC
Q 042677 60 YVFQTKDQIGSFFYFPSINFQKAGGGFGPIRINNR 94 (504)
Q Consensus 60 y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~~ 94 (504)
..+++ +.+|++||-|-...+=..||..++.|...
T Consensus 72 ~~v~L-~~~G~~yFic~~~gHC~~GmKl~I~V~~~ 105 (109)
T 1ws8_A 72 DSIPL-KRPGTFYFLCGIPGHCQLGQKVEIKVDPG 105 (109)
T ss_dssp EEEEC-CSSEEEEEECCSTTTTTTTCEEEEEECC-
T ss_pred EEEEE-CCCcCEEEECCCCCcccCCCEEEEEEcCC
Confidence 36776 67999999998888888899888888653
No 180
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=22.16 E-value=57 Score=26.79 Aligned_cols=55 Identities=22% Similarity=0.294 Sum_probs=30.3
Q ss_pred EEEEEeCCCCCe---eeeeCCcCCCCC-CC--CCCCcccCCcCCCCCeEEEEEEe--CCCcee
Q 042677 16 HVNVFNKMDEPL---LFTWNGIQQRLN-SW--QDGVSGTNCPIQPGTNWTYVFQT--KDQIGS 70 (504)
Q Consensus 16 ~i~v~N~l~~~~---siH~HG~~~~~~-~~--~DG~~~~~~~i~pg~~~~y~~~~--~~~~Gt 70 (504)
.|++.|....+. +=||.=....+. .. -+||-|-|.-|.||++|.|.=-. ..+.|+
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg~~L~Tp~G~ 95 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGTVLDTPFGI 95 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEEEEESSSEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCCcCcCCCceE
Confidence 688889876553 557753321111 01 13333325668999988886433 234554
No 181
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=21.08 E-value=3.3e+02 Score=21.98 Aligned_cols=65 Identities=6% Similarity=0.114 Sum_probs=37.9
Q ss_pred CCeEEEcCCCeEEEEEEeCCCCCeeeeeCC-----cCCCCCC-CCCCCccc-CCcCCCCCeEEEEEEeCCCceee
Q 042677 4 GPLINCSTDDMIHVNVFNKMDEPLLFTWNG-----IQQRLNS-WQDGVSGT-NCPIQPGTNWTYVFQTKDQIGSF 71 (504)
Q Consensus 4 gP~i~~~~Gd~v~i~v~N~l~~~~siH~HG-----~~~~~~~-~~DG~~~~-~~~i~pg~~~~y~~~~~~~~Gt~ 71 (504)
|-+|+++.||++.|+|.-+-+.+++=.... +...... +.+. + . .-.+..|+...+.|++ .++|+.
T Consensus 34 g~tI~v~~Ge~~~I~L~~NPTTGY~W~~~~~~~~vl~~l~~~~y~~~-~-~~~~~vGagG~~~w~f~A-~~~G~~ 105 (132)
T 2wgn_B 34 CSPLKLTQGQELVLTLPSNPTTGFRWELRNPAASVLKRLGPEVYSNS-E-EDSGLVGSGGESTWRFRV-AASGDD 105 (132)
T ss_dssp CSCEEECTTCEEEEEECCCTTTSCEEEEEECCTTTEEECCSCCSCSS-C-SSCCCSSSSCCEEEEEEE-CSCEEE
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCeEEEEecCCCceEEecccceecCC-C-CccCCcCCCceEEEEEEE-cCCceE
Confidence 457999999999999986654444333221 1101000 0110 0 0 1235678889999997 678875
No 182
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=20.37 E-value=1.4e+02 Score=25.15 Aligned_cols=43 Identities=21% Similarity=0.305 Sum_probs=32.8
Q ss_pred cCCCeEEEEEEeCCCCCeeeeeCCcCCCCCCCCCCCcccCCcCCCCCeEEE
Q 042677 10 STDDMIHVNVFNKMDEPLLFTWNGIQQRLNSWQDGVSGTNCPIQPGTNWTY 60 (504)
Q Consensus 10 ~~Gd~v~i~v~N~l~~~~siH~HG~~~~~~~~~DG~~~~~~~i~pg~~~~y 60 (504)
+-+..+.|+|.|..+....+-| + ..+|.+.....+.||+.++.
T Consensus 14 ~s~~~~~V~FvN~s~~~V~v~W--I------Dy~G~~v~Y~~L~PG~~~~q 56 (160)
T 1lm8_V 14 NSREPSQVIFCNRSPRVVLPVW--L------NFDGEPQPYPTLPPGTGRRI 56 (160)
T ss_dssp CCCCEEEEEEEECSSSCEEEEE--E------CTTSCEEECCCBCTTEEEEE
T ss_pred CCCceEEEEEEeCCCCeEEEEE--E------CCCCCEEEeeeeCCCCEEeC
Confidence 3467899999999999999999 3 25666543556899988763
Done!