Query 042680
Match_columns 530
No_of_seqs 327 out of 1321
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 14:41:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042680.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042680hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 100.0 1.7E-67 5.7E-72 589.6 40.4 408 27-530 168-655 (656)
2 1zgk_A Kelch-like ECH-associat 100.0 4.5E-29 1.5E-33 252.3 30.2 262 43-416 11-289 (308)
3 2xn4_A Kelch-like protein 2; s 100.0 6.9E-29 2.3E-33 249.4 29.4 252 56-416 14-278 (302)
4 3ii7_A Kelch-like protein 7; p 100.0 3.5E-28 1.2E-32 244.7 29.0 238 99-416 24-274 (306)
5 2xn4_A Kelch-like protein 2; s 100.0 2.6E-28 8.8E-33 245.2 27.9 252 30-384 35-302 (302)
6 2vpj_A Kelch-like protein 12; 100.0 5.9E-28 2E-32 242.1 30.2 255 56-416 13-280 (301)
7 3ii7_A Kelch-like protein 7; p 100.0 1E-27 3.5E-32 241.2 27.5 249 29-379 28-294 (306)
8 1zgk_A Kelch-like ECH-associat 100.0 1.1E-27 3.9E-32 242.0 26.9 252 30-378 44-308 (308)
9 2uvk_A YJHT; unknown function, 100.0 3.6E-27 1.2E-31 242.3 25.2 256 43-392 6-327 (357)
10 4asc_A Kelch repeat and BTB do 100.0 2.5E-27 8.6E-32 239.9 22.7 270 27-390 15-306 (315)
11 2vpj_A Kelch-like protein 12; 100.0 6.9E-27 2.4E-31 234.3 25.6 248 30-378 36-299 (301)
12 2woz_A Kelch repeat and BTB do 100.0 9.4E-27 3.2E-31 236.0 25.7 272 27-389 26-315 (318)
13 2woz_A Kelch repeat and BTB do 99.9 3E-26 1E-30 232.3 24.0 241 101-417 26-290 (318)
14 4asc_A Kelch repeat and BTB do 99.9 3.2E-26 1.1E-30 231.8 22.3 239 101-416 15-279 (315)
15 1k3i_A Galactose oxidase precu 99.9 7.8E-23 2.7E-27 228.3 23.7 249 101-415 168-498 (656)
16 2zwa_A Leucine carboxyl methyl 99.9 2.5E-22 8.7E-27 226.3 25.4 260 36-391 378-675 (695)
17 2uvk_A YJHT; unknown function, 99.9 1.5E-21 5.3E-26 200.3 22.5 254 34-367 42-352 (357)
18 2zwa_A Leucine carboxyl methyl 99.8 8.8E-20 3E-24 205.6 23.4 213 137-416 396-637 (695)
19 3vgz_A Uncharacterized protein 97.8 0.012 4.1E-07 57.8 26.4 106 99-229 69-181 (353)
20 3no2_A Uncharacterized protein 97.5 0.019 6.4E-07 56.4 23.2 143 198-389 82-231 (276)
21 3dsm_A Uncharacterized protein 97.5 0.058 2E-06 53.8 27.1 227 100-413 65-301 (328)
22 3ow8_A WD repeat-containing pr 97.3 0.15 5E-06 50.5 26.7 137 199-391 171-311 (321)
23 3hfq_A Uncharacterized protein 97.0 0.066 2.3E-06 52.8 20.9 107 99-225 63-176 (347)
24 3dsm_A Uncharacterized protein 97.0 0.11 3.8E-06 51.7 22.4 218 99-388 17-243 (328)
25 1got_B GT-beta; complex (GTP-b 96.9 0.32 1.1E-05 48.2 24.5 137 201-391 152-291 (340)
26 2pbi_B Guanine nucleotide-bind 96.7 0.48 1.6E-05 47.4 24.2 141 199-391 161-305 (354)
27 1rwi_B Serine/threonine-protei 96.6 0.5 1.7E-05 44.4 24.5 150 196-414 110-264 (270)
28 4ery_A WD repeat-containing pr 96.6 0.6 2E-05 45.0 26.0 180 136-391 74-258 (312)
29 2ynn_A Coatomer subunit beta'; 96.4 0.28 9.6E-06 47.7 20.3 179 136-391 64-249 (304)
30 3fm0_A Protein CIAO1; WDR39,SG 96.3 0.052 1.8E-06 54.2 14.4 142 200-391 69-215 (345)
31 3u4y_A Uncharacterized protein 96.3 0.51 1.7E-05 45.7 20.9 95 100-229 21-125 (331)
32 3vgz_A Uncharacterized protein 96.1 1.1 3.6E-05 43.5 24.4 139 199-390 191-334 (353)
33 1gxr_A ESG1, transducin-like e 96.1 0.79 2.7E-05 43.8 21.4 203 100-391 120-327 (337)
34 1rwi_B Serine/threonine-protei 96.1 0.6 2E-05 43.8 19.7 135 199-390 73-211 (270)
35 3vl1_A 26S proteasome regulato 96.0 0.86 2.9E-05 45.6 21.4 221 100-390 120-354 (420)
36 3hfq_A Uncharacterized protein 95.9 0.53 1.8E-05 46.2 19.4 50 99-155 18-68 (347)
37 3no2_A Uncharacterized protein 95.9 0.16 5.5E-06 49.6 15.1 136 203-390 4-144 (276)
38 2z2n_A Virginiamycin B lyase; 95.8 1.3 4.5E-05 41.7 26.6 135 199-389 147-284 (299)
39 3iz6_a 40S ribosomal protein R 95.8 1.8 6.3E-05 43.3 23.3 143 203-391 169-319 (380)
40 2aq5_A Coronin-1A; WD40 repeat 95.8 0.61 2.1E-05 46.9 19.4 147 199-390 183-333 (402)
41 3bws_A Protein LP49; two-domai 95.7 1.3 4.3E-05 44.7 21.8 148 199-389 260-419 (433)
42 4aez_A CDC20, WD repeat-contai 95.7 1.8 6E-05 43.6 22.6 143 199-391 224-370 (401)
43 1k8k_C P40, ARP2/3 complex 41 95.5 0.37 1.2E-05 47.2 16.4 109 199-353 59-172 (372)
44 1l0q_A Surface layer protein; 95.5 2.2 7.6E-05 42.1 23.1 203 100-390 55-264 (391)
45 3jrp_A Fusion protein of prote 95.4 0.77 2.7E-05 44.7 18.2 101 260-391 171-277 (379)
46 2qc5_A Streptogramin B lactona 95.4 1.8 6.2E-05 40.7 27.7 139 196-389 148-290 (300)
47 1q7f_A NHL, brain tumor CG1071 95.4 1.9 6.5E-05 40.8 29.1 138 196-388 123-268 (286)
48 1q7f_A NHL, brain tumor CG1071 95.2 0.7 2.4E-05 44.0 16.6 145 195-389 31-182 (286)
49 1gxr_A ESG1, transducin-like e 95.1 1.2 4E-05 42.6 18.0 139 198-390 103-244 (337)
50 1vyh_C Platelet-activating fac 95.1 1.2 4.1E-05 45.3 19.0 30 199-228 199-230 (410)
51 1nir_A Nitrite reductase; hemo 95.0 2.2 7.7E-05 45.7 21.8 212 100-389 160-389 (543)
52 3mkq_A Coatomer beta'-subunit; 95.0 2.3 7.9E-05 46.7 22.4 140 199-391 104-249 (814)
53 3u4y_A Uncharacterized protein 95.0 2.7 9.3E-05 40.4 22.6 82 289-389 199-292 (331)
54 1erj_A Transcriptional repress 95.0 1.8 6.1E-05 43.6 19.8 68 136-228 174-245 (393)
55 2z2n_A Virginiamycin B lyase; 94.9 2.5 8.5E-05 39.7 26.7 139 196-389 101-243 (299)
56 3jro_A Fusion protein of prote 94.9 0.49 1.7E-05 52.8 16.6 102 260-391 169-275 (753)
57 4ery_A WD repeat-containing pr 94.8 2.9 0.0001 40.0 27.8 179 136-390 116-299 (312)
58 3nol_A Glutamine cyclotransfer 94.8 1.9 6.4E-05 42.4 18.4 71 136-229 50-124 (262)
59 2ovr_B FBW7, F-BOX/WD repeat p 94.7 3 0.0001 42.4 21.0 138 200-392 285-429 (445)
60 3zwl_B Eukaryotic translation 94.7 0.83 2.9E-05 44.2 16.0 94 260-392 186-281 (369)
61 3mbr_X Glutamine cyclotransfer 94.6 3.5 0.00012 40.0 20.5 181 136-389 28-223 (243)
62 2iwa_A Glutamine cyclotransfer 94.4 1.9 6.5E-05 42.3 17.6 180 137-391 30-227 (266)
63 3fvz_A Peptidyl-glycine alpha- 94.3 1.4 4.8E-05 43.4 16.7 70 315-413 147-226 (329)
64 3vl1_A 26S proteasome regulato 94.0 1.3 4.5E-05 44.2 16.1 27 199-225 146-174 (420)
65 2ymu_A WD-40 repeat protein; u 94.0 4.1 0.00014 42.6 20.6 135 199-391 433-570 (577)
66 3nok_A Glutaminyl cyclase; bet 93.8 5.1 0.00017 39.4 19.3 70 136-230 62-134 (268)
67 2qc5_A Streptogramin B lactona 93.8 4.4 0.00015 38.0 25.7 139 196-389 106-248 (300)
68 4h5i_A Guanine nucleotide-exch 93.8 1.7 5.8E-05 43.6 16.4 141 199-391 183-333 (365)
69 3hrp_A Uncharacterized protein 93.8 6.9 0.00024 40.1 25.7 27 199-225 225-253 (409)
70 3jrp_A Fusion protein of prote 93.7 1.2 4.3E-05 43.2 14.9 57 321-391 171-230 (379)
71 1l0q_A Surface layer protein; 93.5 5.1 0.00017 39.5 19.3 134 199-389 80-218 (391)
72 3zwl_B Eukaryotic translation 93.5 1.3 4.4E-05 42.9 14.5 146 199-391 81-239 (369)
73 1k8k_C P40, ARP2/3 complex 41 93.4 0.47 1.6E-05 46.4 11.3 144 199-391 15-163 (372)
74 3dwl_C Actin-related protein 2 93.4 0.11 3.9E-06 51.4 6.8 144 200-391 19-167 (377)
75 3dwl_C Actin-related protein 2 93.3 0.28 9.6E-06 48.6 9.5 146 199-391 62-226 (377)
76 4gqb_B Methylosome protein 50; 93.3 4.2 0.00014 40.5 18.3 176 136-391 136-321 (344)
77 2ynn_A Coatomer subunit beta'; 93.2 1.9 6.5E-05 41.7 15.1 140 199-391 62-207 (304)
78 3v9f_A Two-component system se 93.0 13 0.00045 41.1 28.6 137 200-390 502-647 (781)
79 3q7m_A Lipoprotein YFGL, BAMB; 93.0 7.7 0.00026 38.4 22.1 130 201-389 237-367 (376)
80 3fm0_A Protein CIAO1; WDR39,SG 93.0 0.55 1.9E-05 46.6 11.1 145 199-392 23-172 (345)
81 3scy_A Hypothetical bacterial 92.7 8.1 0.00028 37.8 19.5 19 99-117 29-47 (361)
82 3ow8_A WD repeat-containing pr 92.6 2.6 8.9E-05 41.3 15.3 137 200-391 88-227 (321)
83 3dm0_A Maltose-binding peripla 92.5 12 0.00042 40.5 22.1 137 201-391 526-683 (694)
84 3scy_A Hypothetical bacterial 92.4 8.6 0.00029 37.6 22.1 28 198-225 216-246 (361)
85 2dg1_A DRP35, lactonase; beta 92.3 8.4 0.00029 37.1 24.5 27 199-225 141-175 (333)
86 2iwa_A Glutamine cyclotransfer 92.2 1.9 6.6E-05 42.3 13.5 108 195-355 22-136 (266)
87 2hes_X YDR267CP; beta-propelle 92.0 1.7 5.8E-05 42.6 13.2 146 200-391 161-318 (330)
88 3sfz_A APAF-1, apoptotic pepti 91.8 17 0.00056 42.3 23.3 57 317-391 805-861 (1249)
89 1r5m_A SIR4-interacting protei 91.8 6.2 0.00021 38.7 17.1 27 199-225 254-282 (425)
90 3k26_A Polycomb protein EED; W 91.8 4.3 0.00015 39.1 15.6 24 200-223 169-194 (366)
91 2ymu_A WD-40 repeat protein; u 91.8 14 0.00047 38.4 20.7 135 199-390 392-528 (577)
92 1r5m_A SIR4-interacting protei 91.8 10 0.00036 37.0 19.3 135 201-391 215-351 (425)
93 3k26_A Polycomb protein EED; W 91.5 3.7 0.00013 39.5 14.9 29 200-228 123-154 (366)
94 1got_B GT-beta; complex (GTP-b 91.5 1.7 5.7E-05 42.8 12.4 139 199-391 191-333 (340)
95 4d9s_A UVB-resistance protein 91.3 3.9 0.00013 42.0 15.4 72 313-393 287-359 (406)
96 4d9s_A UVB-resistance protein 91.0 5 0.00017 41.2 16.0 73 313-393 235-307 (406)
97 4g56_B MGC81050 protein; prote 90.9 1.7 5.8E-05 43.3 12.0 24 201-224 103-127 (357)
98 4gga_A P55CDC, cell division c 90.9 9.5 0.00032 38.4 17.8 25 199-223 237-263 (420)
99 3sfz_A APAF-1, apoptotic pepti 90.8 27 0.00091 40.5 23.6 148 199-392 750-904 (1249)
100 3mkq_A Coatomer beta'-subunit; 90.7 3.4 0.00011 45.4 15.1 138 199-391 62-207 (814)
101 2pbi_B Guanine nucleotide-bind 90.6 1.6 5.5E-05 43.4 11.3 135 203-391 209-347 (354)
102 3jro_A Fusion protein of prote 90.5 2.4 8.1E-05 47.2 13.8 57 321-391 169-228 (753)
103 2aq5_A Coronin-1A; WD40 repeat 90.3 2.7 9.1E-05 42.1 12.8 142 200-389 89-239 (402)
104 3q7m_A Lipoprotein YFGL, BAMB; 90.1 4.1 0.00014 40.4 14.0 140 200-389 50-196 (376)
105 4a11_B DNA excision repair pro 89.9 9.2 0.00031 37.3 16.2 143 201-391 108-266 (408)
106 1ri6_A Putative isomerase YBHE 89.7 14 0.00048 35.0 23.7 64 290-368 255-321 (343)
107 1p22_A F-BOX/WD-repeat protein 89.6 17 0.00058 36.7 18.4 170 138-391 182-355 (435)
108 1vyh_C Platelet-activating fac 89.5 1.9 6.4E-05 43.9 11.1 137 199-392 115-256 (410)
109 1jmx_B Amine dehydrogenase; ox 89.4 2.3 7.8E-05 40.9 11.2 28 201-228 8-37 (349)
110 3e5z_A Putative gluconolactona 89.3 8 0.00027 36.7 14.9 30 196-225 71-103 (296)
111 3hrp_A Uncharacterized protein 89.1 20 0.00067 36.7 18.5 141 195-390 132-287 (409)
112 1p22_A F-BOX/WD-repeat protein 89.1 12 0.00039 37.9 16.7 171 137-391 141-315 (435)
113 1w8o_A Bacterial sialidase; 3D 89.1 6.5 0.00022 42.4 15.5 180 296-515 244-438 (601)
114 2hqs_A Protein TOLB; TOLB, PAL 89.0 21 0.00072 36.2 20.6 208 99-391 159-374 (415)
115 1erj_A Transcriptional repress 89.0 4.9 0.00017 40.3 13.7 139 199-391 130-277 (393)
116 1pjx_A Dfpase, DIISOPROPYLFLUO 88.9 16 0.00053 34.5 19.2 56 316-390 231-288 (314)
117 2pm7_B Protein transport prote 88.7 6.4 0.00022 37.7 13.8 23 203-225 66-90 (297)
118 3fvz_A Peptidyl-glycine alpha- 88.7 18 0.00063 35.1 29.5 226 99-390 69-311 (329)
119 3lrv_A PRE-mRNA-splicing facto 88.6 6.6 0.00022 38.3 14.0 139 200-390 133-280 (343)
120 2ovr_B FBW7, F-BOX/WD repeat p 88.6 21 0.00072 35.9 18.3 135 200-391 245-381 (445)
121 3i2n_A WD repeat-containing pr 88.5 7 0.00024 37.4 14.0 24 202-225 178-203 (357)
122 3bg1_A Protein SEC13 homolog; 88.5 6.8 0.00023 37.9 13.9 23 203-225 70-94 (316)
123 2hes_X YDR267CP; beta-propelle 88.4 3 0.0001 40.8 11.3 144 200-391 66-220 (330)
124 4gqb_B Methylosome protein 50; 88.2 2.9 0.0001 41.7 11.2 30 199-228 134-165 (344)
125 4e54_B DNA damage-binding prot 87.9 25 0.00084 35.5 23.7 67 318-389 352-419 (435)
126 3v7d_B Cell division control p 87.8 25 0.00084 35.4 22.5 104 199-355 317-422 (464)
127 3i2n_A WD repeat-containing pr 87.8 12 0.0004 35.8 15.0 147 201-390 126-280 (357)
128 1pgu_A Actin interacting prote 87.5 15 0.00053 38.1 16.9 133 204-391 456-604 (615)
129 3nol_A Glutamine cyclotransfer 86.6 5.2 0.00018 39.2 11.5 103 200-355 49-156 (262)
130 4a2l_A BT_4663, two-component 86.3 45 0.0015 36.9 31.2 139 200-390 505-650 (795)
131 2p9w_A MAL S 1 allergenic prot 86.1 6.9 0.00024 39.7 12.5 171 192-389 11-203 (334)
132 3ei3_B DNA damage-binding prot 86.1 27 0.00091 34.1 23.5 109 199-355 170-283 (383)
133 3bws_A Protein LP49; two-domai 86.1 3.9 0.00013 41.0 10.8 139 200-390 130-273 (433)
134 3g4e_A Regucalcin; six bladed 85.7 13 0.00045 35.6 14.1 27 199-225 60-86 (297)
135 3frx_A Guanine nucleotide-bind 85.7 16 0.00055 35.2 14.8 30 199-228 72-103 (319)
136 4aez_A CDC20, WD repeat-contai 85.4 31 0.001 34.2 22.3 200 100-387 114-320 (401)
137 3frx_A Guanine nucleotide-bind 85.2 28 0.00094 33.5 20.5 136 203-391 165-307 (319)
138 1nr0_A Actin interacting prote 85.1 43 0.0015 35.6 20.2 29 200-228 247-277 (611)
139 3a72_A EXO-arabinanase; arabin 85.1 5.1 0.00017 40.9 11.1 172 192-387 22-221 (355)
140 3bg1_A Protein SEC13 homolog; 84.7 4.8 0.00017 39.0 10.4 108 201-355 22-137 (316)
141 3lrv_A PRE-mRNA-splicing facto 84.4 31 0.001 33.4 20.0 27 198-224 176-204 (343)
142 2pm9_A Protein WEB1, protein t 84.0 18 0.00061 35.5 14.6 146 199-391 172-327 (416)
143 3iz6_a 40S ribosomal protein R 83.6 36 0.0012 33.6 23.5 116 198-355 255-376 (380)
144 3mbr_X Glutamine cyclotransfer 83.2 10 0.00035 36.6 11.8 105 198-355 25-134 (243)
145 3f3f_A Nucleoporin SEH1; struc 82.5 32 0.0011 32.1 15.6 20 203-222 70-91 (351)
146 1nr0_A Actin interacting prote 81.9 14 0.00049 39.5 13.7 145 200-392 198-346 (611)
147 4gga_A P55CDC, cell division c 81.6 10 0.00036 38.1 11.9 136 203-392 115-252 (420)
148 4g56_B MGC81050 protein; prote 81.6 8.7 0.0003 38.1 11.1 30 199-228 146-177 (357)
149 1ri6_A Putative isomerase YBHE 81.5 36 0.0012 32.0 22.7 23 198-220 89-114 (343)
150 3v7d_B Cell division control p 81.4 18 0.00063 36.4 13.7 136 197-389 273-410 (464)
151 2ecf_A Dipeptidyl peptidase IV 81.2 64 0.0022 34.8 22.3 66 314-391 290-357 (741)
152 3ott_A Two-component system se 80.9 70 0.0024 35.0 24.8 132 202-390 481-617 (758)
153 3ei3_B DNA damage-binding prot 80.7 19 0.00066 35.2 13.2 140 200-391 81-226 (383)
154 2pm9_A Protein WEB1, protein t 80.6 22 0.00077 34.8 13.7 143 200-391 75-236 (416)
155 1sq9_A Antiviral protein SKI8; 80.2 24 0.00082 34.3 13.7 31 198-229 192-224 (397)
156 1yfq_A Cell cycle arrest prote 79.9 41 0.0014 31.7 17.1 43 289-331 171-215 (342)
157 3mmy_A MRNA export factor; mRN 79.1 44 0.0015 31.6 19.9 58 315-391 278-336 (368)
158 1pby_B Quinohemoprotein amine 78.7 43 0.0015 31.3 17.2 32 198-229 87-132 (337)
159 3dm0_A Maltose-binding peripla 78.3 20 0.0007 38.8 13.6 140 199-392 437-583 (694)
160 4h5i_A Guanine nucleotide-exch 78.3 18 0.00061 35.9 12.2 143 199-391 140-290 (365)
161 2vdu_B TRNA (guanine-N(7)-)-me 78.1 49 0.0017 33.3 15.8 25 199-223 156-182 (450)
162 2xbg_A YCF48-like protein; pho 77.7 20 0.0007 35.1 12.3 75 299-390 193-269 (327)
163 2xbg_A YCF48-like protein; pho 76.6 28 0.00097 34.1 13.0 76 296-389 148-223 (327)
164 4a11_B DNA excision repair pro 76.5 18 0.00063 35.1 11.5 23 203-225 155-179 (408)
165 3odt_A Protein DOA1; ubiquitin 76.4 48 0.0016 30.6 18.7 46 101-155 41-86 (313)
166 2xzm_R RACK1; ribosome, transl 75.9 22 0.00074 34.6 11.8 29 200-228 84-114 (343)
167 4e54_B DNA damage-binding prot 75.1 12 0.00042 37.8 10.1 55 321-391 176-230 (435)
168 4a2l_A BT_4663, two-component 74.9 1.1E+02 0.0036 33.8 22.6 27 199-225 137-163 (795)
169 2fp8_A Strictosidine synthase; 74.4 63 0.0021 31.0 15.9 104 289-414 208-313 (322)
170 3dw8_B Serine/threonine-protei 74.0 45 0.0015 32.9 13.9 24 199-222 184-208 (447)
171 4aow_A Guanine nucleotide-bind 73.7 60 0.002 30.4 21.6 25 204-228 185-211 (340)
172 2hqs_A Protein TOLB; TOLB, PAL 71.5 77 0.0026 31.9 15.1 141 199-391 185-331 (415)
173 3f3f_A Nucleoporin SEH1; struc 70.8 9 0.00031 36.0 7.3 102 260-391 22-133 (351)
174 2xzm_R RACK1; ribosome, transl 70.3 30 0.001 33.5 11.3 20 203-222 38-59 (343)
175 1pgu_A Actin interacting prote 70.3 40 0.0014 34.9 12.9 143 199-392 167-319 (615)
176 3tc9_A Hypothetical hydrolase; 70.2 44 0.0015 34.4 13.0 138 195-389 138-289 (430)
177 2p4o_A Hypothetical protein; p 69.9 77 0.0026 30.2 14.1 112 195-355 33-148 (306)
178 3gre_A Serine/threonine-protei 68.9 29 0.00099 34.6 11.1 27 202-228 180-208 (437)
179 3nok_A Glutaminyl cyclase; bet 68.6 20 0.00067 35.2 9.2 102 199-355 60-165 (268)
180 3odt_A Protein DOA1; ubiquitin 67.8 34 0.0012 31.7 10.7 135 202-391 27-164 (313)
181 4ggc_A P55CDC, cell division c 67.7 77 0.0026 29.3 17.9 25 199-223 157-183 (318)
182 1jmx_B Amine dehydrogenase; ox 67.2 20 0.00068 34.1 9.1 94 260-389 10-110 (349)
183 3e5z_A Putative gluconolactona 66.6 84 0.0029 29.3 22.9 30 316-363 223-252 (296)
184 2vdu_B TRNA (guanine-N(7)-)-me 65.7 35 0.0012 34.5 11.0 140 199-391 109-261 (450)
185 2dg1_A DRP35, lactonase; beta 65.4 22 0.00075 34.0 9.0 98 260-390 55-154 (333)
186 2pm7_B Protein transport prote 65.1 9.1 0.00031 36.5 6.1 55 321-391 66-122 (297)
187 2oaj_A Protein SNI1; WD40 repe 64.1 1.4E+02 0.0049 33.7 16.8 25 204-228 69-95 (902)
188 3dr2_A Exported gluconolactona 63.6 45 0.0015 31.8 10.9 69 314-389 134-207 (305)
189 2ydt_A EXO-1,5-alpha-L-arabino 62.2 40 0.0014 34.3 10.6 168 191-387 26-226 (367)
190 4hw6_A Hypothetical protein, I 62.1 81 0.0028 32.4 13.2 140 195-389 140-292 (433)
191 2fp8_A Strictosidine synthase; 61.8 50 0.0017 31.7 10.9 159 196-390 82-248 (322)
192 3dr2_A Exported gluconolactona 60.8 99 0.0034 29.3 12.8 26 199-225 92-119 (305)
193 2ad6_A Methanol dehydrogenase 60.1 1.4E+02 0.0046 31.9 14.9 119 201-362 60-192 (571)
194 3g4e_A Regucalcin; six bladed 55.4 43 0.0015 31.8 9.1 78 289-388 36-115 (297)
195 4aow_A Guanine nucleotide-bind 54.7 1.4E+02 0.0047 27.8 13.5 68 136-228 224-293 (340)
196 1pby_B Quinohemoprotein amine 54.2 1.4E+02 0.0047 27.7 15.3 17 212-228 11-27 (337)
197 3vu4_A KMHSV2; beta-propeller 54.0 56 0.0019 31.9 9.9 62 316-390 246-325 (355)
198 2w18_A PALB2, fancn, partner a 53.9 1.4E+02 0.0049 30.2 12.9 26 203-228 192-219 (356)
199 1sq9_A Antiviral protein SKI8; 53.9 91 0.0031 30.0 11.4 61 314-391 190-254 (397)
200 4ggc_A P55CDC, cell division c 52.6 96 0.0033 28.6 10.9 26 202-228 35-61 (318)
201 2ojh_A Uncharacterized protein 52.2 1.3E+02 0.0045 26.9 19.5 49 99-158 22-71 (297)
202 3dw8_B Serine/threonine-protei 51.0 1.6E+02 0.0054 28.8 12.8 26 199-224 233-261 (447)
203 2xyi_A Probable histone-bindin 50.1 79 0.0027 31.7 10.4 22 201-222 240-264 (430)
204 1jof_A Carboxy-CIS,CIS-muconat 49.5 1.7E+02 0.006 28.2 12.7 27 199-225 151-181 (365)
205 2p4o_A Hypothetical protein; p 48.6 1.8E+02 0.0062 27.5 17.1 36 196-232 74-114 (306)
206 2ojh_A Uncharacterized protein 47.0 1.6E+02 0.0054 26.4 20.9 69 317-391 223-292 (297)
207 2z3z_A Dipeptidyl aminopeptida 46.6 2.9E+02 0.0099 29.3 21.9 18 99-116 101-118 (706)
208 1nir_A Nitrite reductase; hemo 45.8 2.9E+02 0.0098 29.0 22.6 171 198-415 329-515 (543)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 45.6 79 0.0027 29.4 9.1 58 315-390 75-136 (314)
210 2vov_A MOPE, surface-associate 45.2 26 0.00091 32.5 5.2 34 490-529 277-331 (336)
211 2xyi_A Probable histone-bindin 45.0 1E+02 0.0035 30.8 10.3 24 199-222 188-214 (430)
212 3vu4_A KMHSV2; beta-propeller 43.4 1.4E+02 0.0048 28.9 10.8 30 199-228 202-234 (355)
213 1jof_A Carboxy-CIS,CIS-muconat 42.7 2.3E+02 0.008 27.3 12.4 29 197-225 44-74 (365)
214 3mmy_A MRNA export factor; mRN 42.6 60 0.002 30.6 7.7 58 315-391 91-150 (368)
215 3gre_A Serine/threonine-protei 41.9 64 0.0022 31.9 8.2 98 260-391 181-282 (437)
216 2ghs_A AGR_C_1268P; regucalcin 40.9 2.5E+02 0.0084 26.8 14.4 29 200-229 97-125 (326)
217 1yiq_A Quinohemoprotein alcoho 40.1 1.1E+02 0.0038 33.4 10.4 98 260-390 70-176 (689)
218 3o4h_A Acylamino-acid-releasin 39.3 1E+02 0.0034 32.2 9.5 140 199-390 116-265 (582)
219 2jkb_A Sialidase B; intramolec 38.6 3.9E+02 0.013 29.4 14.4 39 350-388 617-657 (686)
220 3mvd_K Regulator of chromosome 37.3 45 0.0015 33.9 6.2 73 313-393 304-376 (423)
221 1kv9_A Type II quinohemoprotei 37.2 1.1E+02 0.0037 33.4 9.6 99 259-390 65-171 (668)
222 1w6s_A Methanol dehydrogenase 35.5 3.7E+02 0.013 28.8 13.5 152 200-391 59-262 (599)
223 1k32_A Tricorn protease; prote 35.3 5.4E+02 0.018 29.1 18.0 68 313-390 559-627 (1045)
224 1kb0_A Quinohemoprotein alcoho 34.6 2.8E+02 0.0096 30.1 12.5 24 201-224 75-99 (677)
225 1qks_A Cytochrome CD1 nitrite 34.5 4.4E+02 0.015 27.9 20.3 28 202-229 253-283 (567)
226 2ecf_A Dipeptidyl peptidase IV 34.5 2.3E+02 0.008 30.2 11.7 29 198-226 42-78 (741)
227 1kb0_A Quinohemoprotein alcoho 34.3 1.3E+02 0.0044 32.9 9.6 98 260-390 77-183 (677)
228 2ghs_A AGR_C_1268P; regucalcin 32.7 1.7E+02 0.0059 28.0 9.4 78 289-388 72-151 (326)
229 2bkl_A Prolyl endopeptidase; m 32.7 4.8E+02 0.017 27.8 18.1 22 202-223 280-306 (695)
230 3sjl_D Methylamine dehydrogena 32.3 4.1E+02 0.014 26.9 12.6 144 202-391 42-208 (386)
231 2ad6_A Methanol dehydrogenase 31.4 1.6E+02 0.0055 31.3 9.7 97 260-389 62-168 (571)
232 1yfq_A Cell cycle arrest prote 31.4 84 0.0029 29.5 6.7 60 314-391 60-121 (342)
233 2z3z_A Dipeptidyl aminopeptida 30.8 5E+02 0.017 27.4 14.2 27 199-225 88-114 (706)
234 1kv9_A Type II quinohemoprotei 29.9 3.5E+02 0.012 29.2 12.2 23 201-223 64-87 (668)
235 3azo_A Aminopeptidase; POP fam 27.6 5.4E+02 0.018 26.8 13.0 61 316-390 247-313 (662)
236 1yiq_A Quinohemoprotein alcoho 27.0 6.2E+02 0.021 27.3 13.8 24 201-224 68-92 (689)
237 3a72_A EXO-arabinanase; arabin 26.4 38 0.0013 34.3 3.3 69 313-389 25-105 (355)
238 4hw6_A Hypothetical protein, I 26.2 5.2E+02 0.018 26.1 20.5 26 199-224 234-262 (433)
239 3tc9_A Hypothetical hydrolase; 25.5 5.3E+02 0.018 26.0 21.1 27 199-225 232-261 (430)
240 3mvd_K Regulator of chromosome 25.3 1.5E+02 0.0051 29.9 7.7 68 313-389 85-153 (423)
241 2hz6_A Endoplasmic reticulum t 25.2 52 0.0018 32.8 4.1 24 202-225 8-32 (369)
242 3c75_H MADH, methylamine dehyd 25.0 4.3E+02 0.015 27.0 11.2 111 205-355 86-210 (426)
243 2j04_A TAU60, YPL007P, hypothe 24.9 6.8E+02 0.023 27.0 13.3 25 199-223 136-162 (588)
244 3kci_A Probable E3 ubiquitin-p 24.7 74 0.0025 32.0 5.2 73 313-393 275-347 (389)
245 3o4h_A Acylamino-acid-releasin 24.0 2.2E+02 0.0077 29.4 9.0 29 199-228 156-190 (582)
246 3sjl_D Methylamine dehydrogena 24.0 3.8E+02 0.013 27.1 10.4 34 196-229 81-126 (386)
247 3kya_A Putative phosphatase; s 22.8 4.1E+02 0.014 27.9 10.7 35 195-230 140-179 (496)
248 1flg_A Protein (quinoprotein e 22.2 5E+02 0.017 27.5 11.5 27 200-226 65-94 (582)
249 2hz6_A Endoplasmic reticulum t 20.9 40 0.0014 33.6 2.2 54 290-361 21-74 (369)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.7e-67 Score=589.58 Aligned_cols=408 Identities=22% Similarity=0.321 Sum_probs=316.5
Q ss_pred cCCCCCCCCcEEEccCCcchheeeeeecCCCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEeC
Q 042680 27 AAPAGGFLGSWELISQNAGISAMHTQLLPKTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYDY 106 (530)
Q Consensus 27 ~~~~~~~~g~w~~~~~~~~v~a~h~~~l~~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yDp 106 (530)
....++..++|+.+.+.+. ...|+++++.+||||++|+..... . |+ . + ......++||+
T Consensus 168 ~~~~dp~~~~W~~~~~~P~-~~~~~av~~~~g~l~v~GG~~~~~--~----~~-~------~-------~~~~~~~~yd~ 226 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI-VPAAAAIEPTSGRVLMWSSYRNDA--F----GG-S------P-------GGITLTSSWDP 226 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS-CCSEEEEETTTTEEEEEEECCCTT--T----CS-C------C-------CSEEEEEEECT
T ss_pred cccCCCCCCeeeeeccCCC-CceeEEEEecCCEEEEEecccccc--c----cc-C------C-------CCeEEEEEEeC
Confidence 3445666799999876544 667888873399999999975321 0 10 0 0 02356889999
Q ss_pred CCCcEEEccccC---CcccccceeccCCcEEEccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccccCCCC
Q 042680 107 NKNAVKALKVQS---DTWCSSGGLSADGRLVMLSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPG 182 (530)
Q Consensus 107 ~t~~w~~l~~~~---~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~ 182 (530)
.+++|+++..|+ ..+|+++++ +.||+|||+||.+..++|+| |.++ +|....+|. .
T Consensus 227 ~t~~w~~~~~~~~~~~~~~~~~~~--------~~~g~lyv~GG~~~~~v~~yd~~t~---~W~~~~~~~-~--------- 285 (656)
T 1k3i_A 227 STGIVSDRTVTVTKHDMFCPGISM--------DGNGQIVVTGGNDAKKTSLYDSSSD---SWIPGPDMQ-V--------- 285 (656)
T ss_dssp TTCCBCCCEEEECSCCCSSCEEEE--------CTTSCEEEECSSSTTCEEEEEGGGT---EEEECCCCS-S---------
T ss_pred CCCcEEeCcccCCCCCCccccccC--------CCCCCEEEeCCCCCCceEEecCcCC---ceeECCCCC-c---------
Confidence 999999998873 557776664 56999999999887789999 9875 455443331 1
Q ss_pred CCCccccccCCccceEEEecCCcEEEEeC--------ceEEEEeCCCCeEEEEc-----cCCCCCCCc------------
Q 042680 183 NPKGRFRLENNLYPFVYLLPDGNVYVFAN--------NRSVVHDPKANKIIREF-----PQLPGGARS------------ 237 (530)
Q Consensus 183 ~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg--------~~~e~yDp~tn~w~~~~-----p~mp~~~r~------------ 237 (530)
.++|+.+.+++||+||++|| +++|+|||.+++|. .+ ++|+.. |.
T Consensus 286 ---------~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~-~~~~~~~~p~~~~-~~~~~~~~~~~iyv 354 (656)
T 1k3i_A 286 ---------ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT-SLPNAKVNPMLTA-DKQGLYRSDNHAWL 354 (656)
T ss_dssp ---------CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE-EETTSCSGGGCCC-CTTGGGTTTCSCCE
T ss_pred ---------cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce-eCCCccccccccc-cccceeecCCceEE
Confidence 22344556666999999999 46899999999998 55 334321 10
Q ss_pred ------------------------------------------cCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccc
Q 042680 238 ------------------------------------------YPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLY 275 (530)
Q Consensus 238 ------------------------------------------yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 275 (530)
.+..++++|+|. .+++||+|||.+....
T Consensus 355 ~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~---------~~~~i~v~GG~~~~~~- 424 (656)
T 1k3i_A 355 FGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA---------VKGKILTFGGSPDYQD- 424 (656)
T ss_dssp EECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET---------TTTEEEEECCBSSSSS-
T ss_pred EECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccC---------CCCeEEEEeCCCCCCC-
Confidence 123456666652 4799999999752110
Q ss_pred cccccccccccCC---cEEEEEcCCCCCcceec---CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEE
Q 042680 276 LGEEEKRFVNALD---DCARMVVTSPNPEWKIE---KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPML 349 (530)
Q Consensus 276 ~~~~~~~~~~a~~---s~~~~dp~~~~~~W~~~---~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~ei 349 (530)
..+++ .+++|||. +++|+.. +|+.+|.+++++++|||+|||+||...+. ++. +.+++.++|+
T Consensus 425 --------~~~~~~~~~v~~yd~~--~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ 492 (656)
T 1k3i_A 425 --------SDATTNAHIITLGEPG--TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEI 492 (656)
T ss_dssp --------SBCCCCEEEEECCSTT--SCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEE
T ss_pred --------CCcCCcceEEEcCCCC--CCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEE
Confidence 13455 45566665 4889863 89999999999999999999999986442 222 4467789999
Q ss_pred ecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCCCCCCccccCCCCcceEEEEcCCCCCC--cccCCCCcee
Q 042680 350 YRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDNDGYFEFAKFPTELRLEKFTPPYLAP--EYAALRPAIL 427 (530)
Q Consensus 350 YDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~~~~~t~~~vE~y~Ppyl~~--~~~~~RP~i~ 427 (530)
|||+++ +|+.+++++++|+|||++++|+||+|||+||+.+..+ ..+++++|+|+||||++ +..+.||+|+
T Consensus 493 ydp~t~---~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~~~-----~~~~~~~e~~~Ppyl~~~~~~~~~rP~i~ 564 (656)
T 1k3i_A 493 YVPEQD---TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDC-----TTNHFDAQIFTPNYLYNSNGNLATRPKIT 564 (656)
T ss_dssp EEGGGT---EEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTTC-----SCCCCEEEEEECGGGBCTTSSBCCCCCEE
T ss_pred EcCCCC---ceeecCCCCCccccccHhhcCCCcEEEecCCCCCCCC-----CCCeeEEEEEeChhhccCCCCcCCCCccc
Confidence 999999 9999999999999999999999999999999887643 24578999999999975 3557899999
Q ss_pred ccCCCCccccCCEEEEEEEcCCCCccceEEEEEEcCCccccCCCCCcceEEeeeeeeecccCCCceEEEEEcCCCCCcCC
Q 042680 428 EDQSDKAATYGKWVYLRVKSSEPLTINYVQVSIVAPPFVTHGISMNQRMLFLSVIELKNNVAPGVDEVVVAAPPTSALAP 507 (530)
Q Consensus 428 ~~~~p~~~~~g~~~~v~~~~~~~~~~~~~~v~l~~~~~~THs~n~~QR~v~L~~~~~~~~~~~g~~~~~v~~P~~~~v~p 507 (530)
+.. |+++.||++|+|+++. .+.+|+|||++|+||++|||||+|+|+++.. |+.+++|++|||++|||
T Consensus 565 ~~~-~~~~~~g~~~~~~~~~------~~~~~~l~~~~~~th~~~~~qr~~~l~~~~~------~~~~~~~~~p~~~~~~p 631 (656)
T 1k3i_A 565 RTS-TQSVKVGGRITISTDS------SISKASLIRYGTATHTVNTDQRRIPLTLTNN------GGNSYSFQVPSDSGVAL 631 (656)
T ss_dssp EES-CSEEETTCEEEEEESS------CCSEEEEEECCEEETTBCSSCCEEECCEEEE------ETTEEEEECCSCTTTSC
T ss_pred ccC-CceecCCCEEEEEEec------cceEEEEEecCccccCcCCCCcEEecceEec------CCCEEEEECCCCCCcCC
Confidence 843 8999999999999874 2568999999999999999999999999863 23578999999999999
Q ss_pred CcceEEEEEc-CCcCcccEEEEeC
Q 042680 508 PGYYLLSVVN-QGIPSHSIWFHLK 530 (530)
Q Consensus 508 pG~ymlfv~~-~gvPS~~~~v~i~ 530 (530)
|||||||||+ +||||+|+||+|+
T Consensus 632 pg~y~lf~~~~~g~ps~~~~v~~~ 655 (656)
T 1k3i_A 632 PGYWMLFVMNSAGVPSVASTIRVT 655 (656)
T ss_dssp SEEEEEEEECTTSCBCCCEEEEEE
T ss_pred CcCeEEEEECCCCcccccEEEEEe
Confidence 9999999995 9999999999984
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.97 E-value=4.5e-29 Score=252.28 Aligned_cols=262 Identities=16% Similarity=0.169 Sum_probs=192.7
Q ss_pred CcchheeeeeecCCCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEeCCCCcEEEccccCCccc
Q 042680 43 NAGISAMHTQLLPKTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYDYNKNAVKALKVQSDTWC 122 (530)
Q Consensus 43 ~~~v~a~h~~~l~~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yDp~t~~w~~l~~~~~~~~ 122 (530)
....+.-|.++. .+++||++||.. + . +....++||+.+++|+.++.++..++
T Consensus 11 ~~~~~~~~~~~~-~~~~i~v~GG~~-~-----------~---------------~~~~~~~~d~~~~~W~~~~~~p~~r~ 62 (308)
T 1zgk_A 11 SGLVPRGSHAPK-VGRLIYTAGGYF-R-----------Q---------------SLSYLEAYNPSNGTWLRLADLQVPRS 62 (308)
T ss_dssp ----------CC-CCCCEEEECCBS-S-----------S---------------BCCCEEEEETTTTEEEECCCCSSCCB
T ss_pred CCeeeCCccccC-CCCEEEEEeCcC-C-----------C---------------CcceEEEEcCCCCeEeECCCCCcccc
Confidence 344566777777 799999999972 1 1 13558899999999999998876555
Q ss_pred ccceeccCCcEEEccCCeEEEeccC----CC----CcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCC
Q 042680 123 SSGGLSADGRLVMLSDGSFLVYGGR----DA----FSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENN 193 (530)
Q Consensus 123 ~~~~~l~dG~l~~L~dG~v~VvGG~----~~----~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~ 193 (530)
..+++ +.+++|||+||. +. .++++| |.++ +|....++. . + |
T Consensus 63 ~~~~~--------~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~p-~----------~--r------ 112 (308)
T 1zgk_A 63 GLAGC--------VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN---QWSPCAPMS-V----------P--R------ 112 (308)
T ss_dssp SCEEE--------EETTEEEEECCEEEETTEEEECCCEEEEETTTT---EEEECCCCS-S----------C--C------
T ss_pred cceEE--------EECCEEEEECCCcCCCCCCeecceEEEECCCCC---eEeECCCCC-c----------C--c------
Confidence 43332 339999999998 32 468899 8875 455443331 1 1 1
Q ss_pred ccceEEEecCCcEEEEeC-------ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEe
Q 042680 194 LYPFVYLLPDGNVYVFAN-------NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLIC 266 (530)
Q Consensus 194 ~Yp~~~llp~G~lfv~Gg-------~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~ 266 (530)
+-+..++.+|+||++|| +++++||+.+++|. .+++||. +|.. .+++. ++++||++
T Consensus 113 -~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~------------~~~~iyv~ 174 (308)
T 1zgk_A 113 -NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWH-LVAPMLT-RRIG---VGVAV------------LNRLLYAV 174 (308)
T ss_dssp -BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEE-ECCCCSS-CCBS---CEEEE------------ETTEEEEE
T ss_pred -cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEe-ECCCCCc-cccc---eEEEE------------ECCEEEEE
Confidence 23556677999999999 46899999999999 7888884 4443 23332 37899999
Q ss_pred cCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCc
Q 042680 267 GGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSL 345 (530)
Q Consensus 267 GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~ 345 (530)
||.+.. ..++++++||+. +++|+.. +|+.+|..+.++++ +++|||+||... .....
T Consensus 175 GG~~~~------------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~--------~~~~~ 231 (308)
T 1zgk_A 175 GGFDGT------------NRLNSAECYYPE--RNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDG--------QDQLN 231 (308)
T ss_dssp CCBCSS------------CBCCCEEEEETT--TTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS--------SSBCC
T ss_pred eCCCCC------------CcCceEEEEeCC--CCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCC--------CCccc
Confidence 997522 126789999998 4999997 99999999998887 999999999752 12255
Q ss_pred ccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCCCCCCccccCCCCcceEEEEcCCCCC
Q 042680 346 KPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDNDGYFEFAKFPTELRLEKFTPPYLA 416 (530)
Q Consensus 346 ~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~~~~~t~~~vE~y~Ppyl~ 416 (530)
.+++|||+++ +|+.+++++.+|..|+++++ +++|||.||.... .+ ..++|+|+|....
T Consensus 232 ~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~------~~--~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 232 SVERYDVETE---TWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGH------TF--LDSVECYDPDTDT 289 (308)
T ss_dssp CEEEEETTTT---EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSS------CB--CCEEEEEETTTTE
T ss_pred eEEEEeCCCC---cEEECCCCCCCccceEEEEE--CCEEEEEcCcCCC------cc--cceEEEEcCCCCE
Confidence 7999999999 99999999999999998887 9999999996432 12 3579999998753
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.97 E-value=6.9e-29 Score=249.36 Aligned_cols=252 Identities=17% Similarity=0.211 Sum_probs=190.8
Q ss_pred CCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEeCCCCcEEEccccCCcccccceeccCCcEEE
Q 042680 56 KTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVM 135 (530)
Q Consensus 56 ~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~ 135 (530)
-+++||++||.+.. .....++||+.+++|+.++.++..++..+++
T Consensus 14 ~~~~i~v~GG~~~~---------------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-------- 58 (302)
T 2xn4_A 14 LPKLMVVVGGQAPK---------------------------AIRSVECYDFKEERWHQVAELPSRRCRAGMV-------- 58 (302)
T ss_dssp -CEEEEEECCBSSS---------------------------BCCCEEEEETTTTEEEEECCCSSCCBSCEEE--------
T ss_pred CCCEEEEECCCCCC---------------------------CCCcEEEEcCcCCcEeEcccCCcccccceEE--------
Confidence 37899999996421 1245789999999999999887665544432
Q ss_pred ccCCeEEEeccCCC----CcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEe
Q 042680 136 LSDGSFLVYGGRDA----FSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFA 210 (530)
Q Consensus 136 L~dG~v~VvGG~~~----~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~G 210 (530)
..+++|||+||.+. .++++| |.++ +|....++. . + | +.|..++.+|+||++|
T Consensus 59 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~p-~----------~--r-------~~~~~~~~~~~iyv~G 115 (302)
T 2xn4_A 59 YMAGLVFAVGGFNGSLRVRTVDSYDPVKD---QWTSVANMR-D----------R--R-------STLGAAVLNGLLYAVG 115 (302)
T ss_dssp EETTEEEEESCBCSSSBCCCEEEEETTTT---EEEEECCCS-S----------C--C-------BSCEEEEETTEEEEEE
T ss_pred EECCEEEEEeCcCCCccccceEEECCCCC---ceeeCCCCC-c----------c--c-------cceEEEEECCEEEEEc
Confidence 33999999999764 468999 8875 455444331 1 1 1 2366677899999999
Q ss_pred C-------ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccc
Q 042680 211 N-------NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRF 283 (530)
Q Consensus 211 g-------~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~ 283 (530)
| +++++||+.+++|. .+++||. +|.. .+++. ++++||++||.+....
T Consensus 116 G~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~~~--------- 169 (302)
T 2xn4_A 116 GFDGSTGLSSVEAYNIKSNEWF-HVAPMNT-RRSS---VGVGV------------VGGLLYAVGGYDVASR--------- 169 (302)
T ss_dssp EECSSCEEEEEEEEETTTTEEE-EECCCSS-CCBS---CEEEE------------ETTEEEEECCEETTTT---------
T ss_pred CCCCCccCceEEEEeCCCCeEe-ecCCCCC-cccC---ceEEE------------ECCEEEEEeCCCCCCC---------
Confidence 8 36899999999999 7888884 4443 22332 4789999999762210
Q ss_pred cccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEE
Q 042680 284 VNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAE 362 (530)
Q Consensus 284 ~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~ 362 (530)
..++++++||+. +++|+.. +|+.+|..+.++++ +++|||+||... ......+++|||+++ +|+.
T Consensus 170 -~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~--------~~~~~~~~~yd~~~~---~W~~ 234 (302)
T 2xn4_A 170 -QCLSTVECYNAT--TNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDG--------PLVRKSVEVYDPTTN---AWRQ 234 (302)
T ss_dssp -EECCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSS--------SSBCCCEEEEETTTT---EEEE
T ss_pred -ccccEEEEEeCC--CCcEEECCCCccccccccEEEE-CCEEEEECCCCC--------CcccceEEEEeCCCC---CEee
Confidence 236789999998 4999997 99999999998876 999999999752 122457999999999 9999
Q ss_pred ecCCCCCCcccccceecCCCeEEEcCCCCCCCCccccCCCCcceEEEEcCCCCC
Q 042680 363 LAPTDIPRMYHSVANLLPDGKVFVGGSNDNDGYFEFAKFPTELRLEKFTPPYLA 416 (530)
Q Consensus 363 la~~~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~~~~~t~~~vE~y~Ppyl~ 416 (530)
+++++.+|..|+++++ +++|||.||.... .. ..++|+|+|..-.
T Consensus 235 ~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~------~~--~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 235 VADMNMCRRNAGVCAV--NGLLYVVGGDDGS------CN--LASVEYYNPTTDK 278 (302)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCBCSS------SB--CCCEEEEETTTTE
T ss_pred CCCCCCccccCeEEEE--CCEEEEECCcCCC------cc--cccEEEEcCCCCe
Confidence 9999999999998777 9999999996432 11 3469999998754
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.96 E-value=3.5e-28 Score=244.66 Aligned_cols=238 Identities=12% Similarity=0.141 Sum_probs=181.8
Q ss_pred eeEEEEeCCCCcEEEccccCCcccccceeccCCcEEEccCCeEEEeccCCC---CcEEEE-cCCCCCCCceEEecccccc
Q 042680 99 CHSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDA---FSYEYV-PVEKESNKAAIAFPFLFET 174 (530)
Q Consensus 99 a~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~---~s~E~y-P~~~~~~~~~~~~p~l~~t 174 (530)
...+.||+.+++|+.++.++..++..+++ +.+|+|||+||.+. .+++.| |.++ +|....++. .
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--------~~~~~lyv~GG~~~~~~~~~~~~d~~~~---~W~~~~~~p-~- 90 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACV--------FWDNVVYILGGSQLFPIKRMDCYNVVKD---SWYSKLGPP-T- 90 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSCEEE--------EETTEEEEECCBSSSBCCEEEEEETTTT---EEEEEECCS-S-
T ss_pred ceEEEecCCCCCEecCCCCCcccceeEEE--------EECCEEEEEeCCCCCCcceEEEEeCCCC---eEEECCCCC-c-
Confidence 34779999999999999988666554443 34999999999762 468899 8875 465444331 1
Q ss_pred ccccCCCCCCCccccccCCccceEEEecCCcEEEEeCc--------eEEEEeCCCCeEEEEccCCCCCCCccCCCceEee
Q 042680 175 QDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN--------RSVVHDPKANKIIREFPQLPGGARSYPATGTSVL 246 (530)
Q Consensus 175 ~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~--------~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svm 246 (530)
+ | +-|..++.+|+||++||. ++++||+.+++|. .+++||. +|.. .+++.
T Consensus 91 ---------~--r-------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~---~~~~~ 147 (306)
T 3ii7_A 91 ---------P--R-------DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH-TKPSMLT-QRCS---HGMVE 147 (306)
T ss_dssp ---------C--C-------BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE
T ss_pred ---------c--c-------cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE-eCCCCcC-Ccce---eEEEE
Confidence 1 1 235667779999999994 4899999999999 7888884 4443 23332
Q ss_pred ccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEE
Q 042680 247 LPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVL 325 (530)
Q Consensus 247 lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~Vl 325 (530)
++++||++||....... ...++++++||+. +++|+.. +|+.+|..+.++++ +++||
T Consensus 148 ------------~~~~iyv~GG~~~~~~~--------~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~ 204 (306)
T 3ii7_A 148 ------------ANGLIYVCGGSLGNNVS--------GRVLNSCEVYDPA--TETWTELCPMIEARKNHGLVFV-KDKIF 204 (306)
T ss_dssp ------------ETTEEEEECCEESCTTT--------CEECCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEE
T ss_pred ------------ECCEEEEECCCCCCCCc--------ccccceEEEeCCC--CCeEEECCCccchhhcceEEEE-CCEEE
Confidence 37899999997632110 0126789999998 4899998 99999999998887 99999
Q ss_pred EEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCCCCCCccccCCCCcc
Q 042680 326 IINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDNDGYFEFAKFPTEL 405 (530)
Q Consensus 326 ViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~~~~~t~~ 405 (530)
|+||... ......+++|||+++ +|+.+++++.+|..|+++++ +++|||.||.... .+ ..
T Consensus 205 v~GG~~~--------~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~------~~--~~ 263 (306)
T 3ii7_A 205 AVGGQNG--------LGGLDNVEYYDIKLN---EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGV------GR--LG 263 (306)
T ss_dssp EECCEET--------TEEBCCEEEEETTTT---EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSS------SB--CC
T ss_pred EEeCCCC--------CCCCceEEEeeCCCC---cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCC------ee--ee
Confidence 9999752 123457899999999 99999999999999998887 9999999996432 12 34
Q ss_pred eEEEEcCCCCC
Q 042680 406 RLEKFTPPYLA 416 (530)
Q Consensus 406 ~vE~y~Ppyl~ 416 (530)
++|+|+|..-.
T Consensus 264 ~~~~yd~~~~~ 274 (306)
T 3ii7_A 264 HILEYNTETDK 274 (306)
T ss_dssp EEEEEETTTTE
T ss_pred eEEEEcCCCCe
Confidence 79999998854
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.96 E-value=2.6e-28 Score=245.17 Aligned_cols=252 Identities=14% Similarity=0.108 Sum_probs=190.7
Q ss_pred CCCCCCcEEEccCCcchheeeeeecCCCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEeCCCC
Q 042680 30 AGGFLGSWELISQNAGISAMHTQLLPKTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYDYNKN 109 (530)
Q Consensus 30 ~~~~~g~w~~~~~~~~v~a~h~~~l~~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yDp~t~ 109 (530)
.+...++|+.+.....-+..|.++. .+++||++||.... . +....++||+.++
T Consensus 35 ~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~-----------~---------------~~~~~~~~d~~~~ 87 (302)
T 2xn4_A 35 YDFKEERWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGS-----------L---------------RVRTVDSYDPVKD 87 (302)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSS-----------S---------------BCCCEEEEETTTT
T ss_pred EcCcCCcEeEcccCCcccccceEEE-ECCEEEEEeCcCCC-----------c---------------cccceEEECCCCC
Confidence 3445689999877766777788777 79999999996421 0 1355789999999
Q ss_pred cEEEccccCCcccccceeccCCcEEEccCCeEEEeccCCC----CcEEEE-cCCCCCCCceEEeccccccccccCCCCCC
Q 042680 110 AVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDA----FSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNP 184 (530)
Q Consensus 110 ~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~----~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~ 184 (530)
+|+.++.|+..++..+++ +.+|+|||+||.+. .++|.| |.++ +|....++.. +
T Consensus 88 ~W~~~~~~p~~r~~~~~~--------~~~~~iyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~p~-----------~ 145 (302)
T 2xn4_A 88 QWTSVANMRDRRSTLGAA--------VLNGLLYAVGGFDGSTGLSSVEAYNIKSN---EWFHVAPMNT-----------R 145 (302)
T ss_dssp EEEEECCCSSCCBSCEEE--------EETTEEEEEEEECSSCEEEEEEEEETTTT---EEEEECCCSS-----------C
T ss_pred ceeeCCCCCccccceEEE--------EECCEEEEEcCCCCCccCceEEEEeCCCC---eEeecCCCCC-----------c
Confidence 999999987655544432 33999999999764 368999 8875 4655444311 1
Q ss_pred CccccccCCccceEEEecCCcEEEEeCc---------eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCC
Q 042680 185 KGRFRLENNLYPFVYLLPDGNVYVFANN---------RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDT 255 (530)
Q Consensus 185 ~~~~~~~~~~Yp~~~llp~G~lfv~Gg~---------~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~ 255 (530)
| +-+..+..+|+||++||. ++++||+.+++|. .+++||. +|.. .+++.
T Consensus 146 --r-------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~--------- 202 (302)
T 2xn4_A 146 --R-------SSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMST-RRSG---AGVGV--------- 202 (302)
T ss_dssp --C-------BSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE---------
T ss_pred --c-------cCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCcc-cccc---ccEEE---------
Confidence 1 235667789999999983 4899999999999 7888873 4443 22332
Q ss_pred CCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCC
Q 042680 256 YKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGS 334 (530)
Q Consensus 256 ~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~ 334 (530)
++++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.++++ +|+|||+||...
T Consensus 203 ---~~~~iyv~GG~~~~------------~~~~~~~~yd~~--~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~-- 262 (302)
T 2xn4_A 203 ---LNNLLYAVGGHDGP------------LVRKSVEVYDPT--TNAWRQVADMNMCRRNAGVCAV-NGLLYVVGGDDG-- 262 (302)
T ss_dssp ---ETTEEEEECCBSSS------------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCS--
T ss_pred ---ECCEEEEECCCCCC------------cccceEEEEeCC--CCCEeeCCCCCCccccCeEEEE-CCEEEEECCcCC--
Confidence 47999999997522 235689999998 4899987 89999999988876 999999999752
Q ss_pred CCcccCCCCCcccEEecCCCCCCCceEEec-CCCCCCcccccceecCCCeE
Q 042680 335 GGWHCADKPSLKPMLYRPNAPEGQRFAELA-PTDIPRMYHSVANLLPDGKV 384 (530)
Q Consensus 335 ~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la-~~~~~R~yHS~a~LLpdGrV 384 (530)
......+++|||+++ +|+.++ +|+.+|.+|+++++ +++|
T Consensus 263 ------~~~~~~v~~yd~~~~---~W~~~~~~~~~~r~~~~~~~~--~~~i 302 (302)
T 2xn4_A 263 ------SCNLASVEYYNPTTD---KWTVVSSCMSTGRSYAGVTVI--DKRL 302 (302)
T ss_dssp ------SSBCCCEEEEETTTT---EEEECSSCCSSCCBSCEEEEE--EC--
T ss_pred ------CcccccEEEEcCCCC---eEEECCcccCcccccceEEEe--cccC
Confidence 123457999999999 999997 89999999998887 6664
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.96 E-value=5.9e-28 Score=242.14 Aligned_cols=255 Identities=16% Similarity=0.136 Sum_probs=190.4
Q ss_pred CCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEeCCCCcEEEccccCCcccccceeccCCcEEE
Q 042680 56 KTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVM 135 (530)
Q Consensus 56 ~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~ 135 (530)
.+++||++||...+ + . .....++||+.+++|+.++.++..++..+++
T Consensus 13 ~~~~i~~~GG~~~~--------~--~---------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-------- 59 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQ--------Q--S---------------PIDVVEKYDPKTQEWSFLPSITRKRRYVASV-------- 59 (301)
T ss_dssp CCEEEEEECCEETT--------T--E---------------ECCCEEEEETTTTEEEECCCCSSCCBSCEEE--------
T ss_pred CCCEEEEEeCccCC--------C--c---------------ceeEEEEEcCCCCeEEeCCCCChhhccccEE--------
Confidence 37899999994321 0 0 2356889999999999999887655544432
Q ss_pred ccCCeEEEeccCCC----CcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEe
Q 042680 136 LSDGSFLVYGGRDA----FSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFA 210 (530)
Q Consensus 136 L~dG~v~VvGG~~~----~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~G 210 (530)
+.+++|||+||.+. .++++| |.+++...|....++. . + .+-|..+..+|+||++|
T Consensus 60 ~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p-~----------~---------r~~~~~~~~~~~lyv~G 119 (301)
T 2vpj_A 60 SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMN-V----------R---------RGLAGATTLGDMIYVSG 119 (301)
T ss_dssp EETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCS-S----------C---------CBSCEEEEETTEEEEEC
T ss_pred EECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCC-C----------C---------ccceeEEEECCEEEEEc
Confidence 34999999999763 468899 8775100155443331 1 1 12356677799999999
Q ss_pred C-------ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccc
Q 042680 211 N-------NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRF 283 (530)
Q Consensus 211 g-------~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~ 283 (530)
| +++++||+.+++|. .+++||. +|.. .+++. ++++||++||.+..
T Consensus 120 G~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~---~~~~~------------~~~~iyv~GG~~~~----------- 171 (301)
T 2vpj_A 120 GFDGSRRHTSMERYDPNIDQWS-MLGDMQT-AREG---AGLVV------------ASGVIYCLGGYDGL----------- 171 (301)
T ss_dssp CBCSSCBCCEEEEEETTTTEEE-EEEECSS-CCBS---CEEEE------------ETTEEEEECCBCSS-----------
T ss_pred ccCCCcccceEEEEcCCCCeEE-ECCCCCC-Cccc---ceEEE------------ECCEEEEECCCCCC-----------
Confidence 8 36899999999999 7888873 4443 23332 37999999997522
Q ss_pred cccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEE
Q 042680 284 VNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAE 362 (530)
Q Consensus 284 ~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~ 362 (530)
..++++++||+. +++|+.. +|+.+|..+.++++ +++|||+||... . .....+++|||+++ +|+.
T Consensus 172 -~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~-~-------~~~~~v~~yd~~~~---~W~~ 236 (301)
T 2vpj_A 172 -NILNSVEKYDPH--TGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFDG-T-------AHLSSVEAYNIRTD---SWTT 236 (301)
T ss_dssp -CBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCS-S-------SBCCCEEEEETTTT---EEEE
T ss_pred -cccceEEEEeCC--CCcEEeCCCCCcccccceEEEE-CCEEEEEeCCCC-C-------cccceEEEEeCCCC---cEEE
Confidence 246789999998 4899997 89999999998876 999999999752 1 12457899999999 9999
Q ss_pred ecCCCCCCcccccceecCCCeEEEcCCCCCCCCccccCCCCcceEEEEcCCCCC
Q 042680 363 LAPTDIPRMYHSVANLLPDGKVFVGGSNDNDGYFEFAKFPTELRLEKFTPPYLA 416 (530)
Q Consensus 363 la~~~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~~~~~t~~~vE~y~Ppyl~ 416 (530)
+++++.+|.+|+++++ +++||+.||.... .. ..++|+|+|..-.
T Consensus 237 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~------~~--~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 237 VTSMTTPRCYVGATVL--RGRLYAIAGYDGN------SL--LSSIECYDPIIDS 280 (301)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCBCSS------SB--EEEEEEEETTTTE
T ss_pred CCCCCCcccceeEEEE--CCEEEEEcCcCCC------cc--cccEEEEcCCCCe
Confidence 9999999999998777 9999999995432 11 3579999998643
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.96 E-value=1e-27 Score=241.21 Aligned_cols=249 Identities=14% Similarity=0.121 Sum_probs=192.1
Q ss_pred CCCCCCCcEEEccCCcchheeeeeecCCCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEeCCC
Q 042680 29 PAGGFLGSWELISQNAGISAMHTQLLPKTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYDYNK 108 (530)
Q Consensus 29 ~~~~~~g~w~~~~~~~~v~a~h~~~l~~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yDp~t 108 (530)
..+...++|+.+.....-+..|+++. .++++|++||.. . . +....++||+.+
T Consensus 28 ~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~-~-----------~---------------~~~~~~~~d~~~ 79 (306)
T 3ii7_A 28 YFNPKDYSWTDIRCPFEKRRDAACVF-WDNVVYILGGSQ-L-----------F---------------PIKRMDCYNVVK 79 (306)
T ss_dssp EEETTTTEEEECCCCSCCCBSCEEEE-ETTEEEEECCBS-S-----------S---------------BCCEEEEEETTT
T ss_pred EecCCCCCEecCCCCCcccceeEEEE-ECCEEEEEeCCC-C-----------C---------------CcceEEEEeCCC
Confidence 34556789999987777788888887 799999999965 1 0 236688999999
Q ss_pred CcEEEccccCCcccccceeccCCcEEEccCCeEEEeccCC-C----CcEEEE-cCCCCCCCceEEeccccccccccCCCC
Q 042680 109 NAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRD-A----FSYEYV-PVEKESNKAAIAFPFLFETQDFLERPG 182 (530)
Q Consensus 109 ~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~-~----~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~ 182 (530)
++|+.++.++..++..+++ +.+|+|||+||.+ . .++|+| |.++ +|....++. .
T Consensus 80 ~~W~~~~~~p~~r~~~~~~--------~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~---~W~~~~~~p-~--------- 138 (306)
T 3ii7_A 80 DSWYSKLGPPTPRDSLAAC--------AAEGKIYTSGGSEVGNSALYLFECYDTRTE---SWHTKPSML-T--------- 138 (306)
T ss_dssp TEEEEEECCSSCCBSCEEE--------EETTEEEEECCBBTTBSCCCCEEEEETTTT---EEEEECCCS-S---------
T ss_pred CeEEECCCCCccccceeEE--------EECCEEEEECCCCCCCcEeeeEEEEeCCCC---ceEeCCCCc-C---------
Confidence 9999999887555544432 3399999999986 2 468999 8875 465443331 1
Q ss_pred CCCccccccCCccceEEEecCCcEEEEeCc-----------eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCC
Q 042680 183 NPKGRFRLENNLYPFVYLLPDGNVYVFANN-----------RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYL 251 (530)
Q Consensus 183 ~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~-----------~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~ 251 (530)
+ .+-|..+..+|+||++||. ++++||+.+++|. .+++||. +|.. .+++.
T Consensus 139 -~---------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~----- 198 (306)
T 3ii7_A 139 -Q---------RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT-ELCPMIE-ARKN---HGLVF----- 198 (306)
T ss_dssp -C---------CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE-----
T ss_pred -C---------cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-ECCCccc-hhhc---ceEEE-----
Confidence 1 1235667779999999982 4799999999999 7888874 4442 23332
Q ss_pred CCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCC
Q 042680 252 PRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGA 330 (530)
Q Consensus 252 ~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~ 330 (530)
++++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.++++ +++|||+||.
T Consensus 199 -------~~~~i~v~GG~~~~------------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~ 256 (306)
T 3ii7_A 199 -------VKDKIFAVGGQNGL------------GGLDNVEYYDIK--LNEWKMVSPMPWKGVTVKCAAV-GSIVYVLAGF 256 (306)
T ss_dssp -------ETTEEEEECCEETT------------EEBCCEEEEETT--TTEEEECCCCSCCBSCCEEEEE-TTEEEEEECB
T ss_pred -------ECCEEEEEeCCCCC------------CCCceEEEeeCC--CCcEEECCCCCCCccceeEEEE-CCEEEEEeCc
Confidence 47899999997622 135689999998 4899998 99999999998887 9999999997
Q ss_pred CCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceec
Q 042680 331 DLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLL 379 (530)
Q Consensus 331 ~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LL 379 (530)
+. . .....+++|||+++ +|+.+++++.+|.+|+++++.
T Consensus 257 ~~-~-------~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~~ 294 (306)
T 3ii7_A 257 QG-V-------GRLGHILEYNTETD---KWVANSKVRAFPVTSCLICVV 294 (306)
T ss_dssp CS-S-------SBCCEEEEEETTTT---EEEEEEEEECCSCTTCEEEEE
T ss_pred CC-C-------eeeeeEEEEcCCCC---eEEeCCCcccccceeEEEEEC
Confidence 52 1 13457899999999 999999999999999988874
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.96 E-value=1.1e-27 Score=241.97 Aligned_cols=252 Identities=15% Similarity=0.101 Sum_probs=190.1
Q ss_pred CCCCCCcEEEccCCcchheeeeeecCCCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEeCCCC
Q 042680 30 AGGFLGSWELISQNAGISAMHTQLLPKTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYDYNKN 109 (530)
Q Consensus 30 ~~~~~g~w~~~~~~~~v~a~h~~~l~~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yDp~t~ 109 (530)
.+...++|+.+.....-+.-|.++. .+++||++||....+. + . .+.+..++||+.++
T Consensus 44 ~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~------~--~--------------~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 44 YNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPD------G--N--------------TDSSALDCYNPMTN 100 (308)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETT------E--E--------------EECCCEEEEETTTT
T ss_pred EcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCC------C--C--------------eecceEEEECCCCC
Confidence 3445689999977666677788777 7999999999742100 0 0 02356889999999
Q ss_pred cEEEccccCCcccccceeccCCcEEEccCCeEEEeccCCC----CcEEEE-cCCCCCCCceEEeccccccccccCCCCCC
Q 042680 110 AVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDA----FSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNP 184 (530)
Q Consensus 110 ~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~----~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~ 184 (530)
+|+.++.|+..++..+++ +.+|+|||+||.+. .++|.| |.++ +|....++..
T Consensus 101 ~W~~~~~~p~~r~~~~~~--------~~~~~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~------------ 157 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVG--------VIDGHIYAVGGSHGCIHHNSVERYEPERD---EWHLVAPMLT------------ 157 (308)
T ss_dssp EEEECCCCSSCCBTCEEE--------EETTEEEEECCEETTEECCCEEEEETTTT---EEEECCCCSS------------
T ss_pred eEeECCCCCcCccccEEE--------EECCEEEEEcCCCCCcccccEEEECCCCC---eEeECCCCCc------------
Confidence 999999887655544432 33999999999764 468999 8875 4554433311
Q ss_pred CccccccCCccceEEEecCCcEEEEeCc-------eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCC
Q 042680 185 KGRFRLENNLYPFVYLLPDGNVYVFANN-------RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYK 257 (530)
Q Consensus 185 ~~~~~~~~~~Yp~~~llp~G~lfv~Gg~-------~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~ 257 (530)
..+-+..++.+++||++||. ++++||+.+++|. .+++||. +|.. .+++.
T Consensus 158 --------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~----------- 213 (308)
T 1zgk_A 158 --------RRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNT-IRSG---AGVCV----------- 213 (308)
T ss_dssp --------CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSS-CCBS---CEEEE-----------
T ss_pred --------cccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCC-cccc---ceEEE-----------
Confidence 11235566679999999983 5899999999999 7888874 4443 22332
Q ss_pred CCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCC
Q 042680 258 PVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGG 336 (530)
Q Consensus 258 ~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g 336 (530)
++++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.++++ +++|||+||...
T Consensus 214 -~~~~iyv~GG~~~~------------~~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~---- 273 (308)
T 1zgk_A 214 -LHNCIYAAGGYDGQ------------DQLNSVERYDVE--TETWTFVAPMKHRRSALGITVH-QGRIYVLGGYDG---- 273 (308)
T ss_dssp -ETTEEEEECCBCSS------------SBCCCEEEEETT--TTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS----
T ss_pred -ECCEEEEEeCCCCC------------CccceEEEEeCC--CCcEEECCCCCCCccceEEEEE-CCEEEEEcCcCC----
Confidence 37999999997622 136789999998 4899997 99999999998886 999999999752
Q ss_pred cccCCCCCcccEEecCCCCCCCceEEecCCCCCCccccccee
Q 042680 337 WHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANL 378 (530)
Q Consensus 337 ~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~L 378 (530)
......+++|||+++ +|+.+++|+.+|.+|++++|
T Consensus 274 ----~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 274 ----HTFLDSVECYDPDTD---TWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp ----SCBCCEEEEEETTTT---EEEEEEECSSCCBSCEEEEC
T ss_pred ----CcccceEEEEcCCCC---EEeecCCCCCCcccceeEeC
Confidence 123457899999999 99999999999999997764
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.95 E-value=3.6e-27 Score=242.32 Aligned_cols=256 Identities=15% Similarity=0.146 Sum_probs=176.1
Q ss_pred CcchheeeeeecCCCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEeCC--CCcEEEccccC-C
Q 042680 43 NAGISAMHTQLLPKTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYDYN--KNAVKALKVQS-D 119 (530)
Q Consensus 43 ~~~v~a~h~~~l~~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yDp~--t~~w~~l~~~~-~ 119 (530)
++.-+..|++++ .+++||++||... ...++||+. +++|+.++.|+ .
T Consensus 6 lP~~r~~~~~~~-~~~~iyv~GG~~~------------------------------~~~~~~d~~~~~~~W~~~~~~p~~ 54 (357)
T 2uvk_A 6 TPVPFKSGTGAI-DNDTVYIGLGSAG------------------------------TAWYKLDTQAKDKKWTALAAFPGG 54 (357)
T ss_dssp CSSCCCSCEEEE-ETTEEEEECGGGT------------------------------TCEEEEETTSSSCCEEECCCCTTC
T ss_pred CCccccceEEEE-ECCEEEEEeCcCC------------------------------CeEEEEccccCCCCeeECCCCCCC
Confidence 334445577766 6999999998531 126799997 49999999987 5
Q ss_pred cccccceeccCCcEEEccCCeEEEeccC-C--------CCcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCcccc
Q 042680 120 TWCSSGGLSADGRLVMLSDGSFLVYGGR-D--------AFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFR 189 (530)
Q Consensus 120 ~~~~~~~~l~dG~l~~L~dG~v~VvGG~-~--------~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~ 189 (530)
.++..+++ +.+|+|||+||. + ..++|+| |.++ +|....++. +..|
T Consensus 55 ~R~~~~~~--------~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~~------------p~~r-- 109 (357)
T 2uvk_A 55 PRDQATSA--------FIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN---SWVKLMSHA------------PMGM-- 109 (357)
T ss_dssp CCBSCEEE--------EETTEEEEECCEEECTTSCEEECCCEEEEETTTT---EEEECSCCC------------SSCC--
T ss_pred cCccceEE--------EECCEEEEEcCCCCCCCccceeeccEEEEeCCCC---cEEECCCCC------------Cccc--
Confidence 55544432 339999999998 3 1468999 8875 465544432 1122
Q ss_pred ccCCccceEEEecCCcEEEEeC-----------------------------------------ceEEEEeCCCCeEEEEc
Q 042680 190 LENNLYPFVYLLPDGNVYVFAN-----------------------------------------NRSVVHDPKANKIIREF 228 (530)
Q Consensus 190 ~~~~~Yp~~~llp~G~lfv~Gg-----------------------------------------~~~e~yDp~tn~w~~~~ 228 (530)
+-|..+..+|+||++|| +++++||+.+++|. .+
T Consensus 110 -----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~ 183 (357)
T 2uvk_A 110 -----AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWS-YA 183 (357)
T ss_dssp -----SSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEE-EE
T ss_pred -----ccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEE-EC
Confidence 23555668999999999 46899999999999 67
Q ss_pred cCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CC
Q 042680 229 PQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KM 307 (530)
Q Consensus 229 p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M 307 (530)
++||...|.. .+++. .+++||++||..... ..+..+++||+...+++|+.. +|
T Consensus 184 ~~~p~~~~~~---~~~~~------------~~~~iyv~GG~~~~~-----------~~~~~v~~~d~d~~~~~W~~~~~~ 237 (357)
T 2uvk_A 184 GESPWYGTAG---AAVVN------------KGDKTWLINGEAKPG-----------LRTDAVFELDFTGNNLKWNKLAPV 237 (357)
T ss_dssp EECSSCCCBS---CEEEE------------ETTEEEEECCEEETT-----------EECCCEEEEECC---CEEEECCCS
T ss_pred CCCCCCCccc---ccEEE------------ECCEEEEEeeecCCC-----------cccCceEEEEecCCCCcEEecCCC
Confidence 8887422221 22222 479999999975221 135678889873336899997 88
Q ss_pred CCccc--cceeeeecCCeEEEEcCCCCCCC------C--c-ccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccc
Q 042680 308 PAPRT--MADGVLLPNGEVLIINGADLGSG------G--W-HCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVA 376 (530)
Q Consensus 308 ~~~R~--~~~~vvLpdG~VlViGG~~~g~~------g--~-~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a 376 (530)
+.+|. .+.++++ +++|||+||...... + | ......+..+++|||+++ +|+.+++++.+|.+|+++
T Consensus 238 ~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~ 313 (357)
T 2uvk_A 238 SSPDGVAGGFAGIS-NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSGELSQGRAYGVSL 313 (357)
T ss_dssp STTTCCBSCEEEEE-TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC------CEEEEECSSCCBSSEEE
T ss_pred CCCcccccceEEEE-CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC---ceeeCCCCCCCcccceeE
Confidence 77654 4556664 999999999642100 0 0 001123457899999999 999999999999999987
Q ss_pred eecCCCeEEEcCCCCC
Q 042680 377 NLLPDGKVFVGGSNDN 392 (530)
Q Consensus 377 ~LLpdGrVlv~GG~~~ 392 (530)
++ +++|||.||...
T Consensus 314 ~~--~~~i~v~GG~~~ 327 (357)
T 2uvk_A 314 PW--NNSLLIIGGETA 327 (357)
T ss_dssp EE--TTEEEEEEEECG
T ss_pred Ee--CCEEEEEeeeCC
Confidence 76 999999999653
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=239.94 Aligned_cols=270 Identities=16% Similarity=0.116 Sum_probs=195.7
Q ss_pred cCCCCCCCCcEEEccCCc--chheeeeeecCCCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEE
Q 042680 27 AAPAGGFLGSWELISQNA--GISAMHTQLLPKTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFY 104 (530)
Q Consensus 27 ~~~~~~~~g~w~~~~~~~--~v~a~h~~~l~~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~y 104 (530)
...++...++|+. ...+ .-+.-|+++. .+++||++||...... +. . ....+..++|
T Consensus 15 ~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~------~~-~-------------~~~~~~~~~~ 72 (315)
T 4asc_A 15 AVAYDPAANECYC-ASLSSQVPKNHVSLVT-KENQVFVAGGLFYNED------NK-E-------------DPMSAYFLQF 72 (315)
T ss_dssp EEEEETTTTEEEE-EECCCCSCSSEEEEEC-TTCCEEEEEEEEECSS------CS-S-------------SCEEEEEEEE
T ss_pred eEEECCCCCeEec-CCCCCCCCccceEEEE-ECCEEEEEcCcccCCC------CC-c-------------cccccceEEe
Confidence 3445667899987 3433 2577788877 7999999999742210 00 0 0023558899
Q ss_pred eCCCCcEEEccccCCcccccceeccCCcEEEccCCeEEEeccCC----C---CcEEEE-cCCCCCCCceEEecccccccc
Q 042680 105 DYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRD----A---FSYEYV-PVEKESNKAAIAFPFLFETQD 176 (530)
Q Consensus 105 Dp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~----~---~s~E~y-P~~~~~~~~~~~~p~l~~t~d 176 (530)
|+.+++|+.++.++..++..+++ +.+++|||+||.+ . .++++| |.++ +|....++.
T Consensus 73 d~~~~~W~~~~~~p~~r~~~~~~--------~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~p----- 136 (315)
T 4asc_A 73 DHLDSEWLGMPPLPSPRCLFGLG--------EALNSIYVVGGREIKDGERCLDSVMCYDRLSF---KWGESDPLP----- 136 (315)
T ss_dssp ETTTTEEEECCCBSSCEESCEEE--------EETTEEEEECCEESSTTCCBCCCEEEEETTTT---EEEECCCCS-----
T ss_pred cCCCCeEEECCCCCcchhceeEE--------EECCEEEEEeCCcCCCCCcccceEEEECCCCC---cEeECCCCC-----
Confidence 99999999999998665554442 3399999999964 1 468999 8875 455443331
Q ss_pred ccCCCCCCCccccccCCccceEEEecCCcEEEEeCc--------eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeecc
Q 042680 177 FLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN--------RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLP 248 (530)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~--------~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlp 248 (530)
. ..+-|..+..+++||++||. ++++||+.+++|. .+++||. +|.. .+++.
T Consensus 137 --------~-------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~-- 194 (315)
T 4asc_A 137 --------Y-------VVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWK-ELAPMQT-ARSL---FGATV-- 194 (315)
T ss_dssp --------S-------CCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEE-ECCCCSS-CCBS---CEEEE--
T ss_pred --------C-------cccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEE-ECCCCCC-chhc---eEEEE--
Confidence 1 12346677789999999995 6899999999999 7888884 4443 23332
Q ss_pred CCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEE
Q 042680 249 LYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLII 327 (530)
Q Consensus 249 l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlVi 327 (530)
++++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.++++ +|+|||+
T Consensus 195 ----------~~~~iyv~GG~~~~------------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~ 249 (315)
T 4asc_A 195 ----------HDGRIIVAAGVTDT------------GLTSSAEVYSIT--DNKWAPFEAFPQERSSLSLVSL-VGTLYAI 249 (315)
T ss_dssp ----------ETTEEEEEEEECSS------------SEEEEEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEE
T ss_pred ----------ECCEEEEEeccCCC------------CccceEEEEECC--CCeEEECCCCCCcccceeEEEE-CCEEEEE
Confidence 47899999997522 135679999998 4899998 89999999998886 9999999
Q ss_pred cCCCCCCCCcccCC---CCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 328 NGADLGSGGWHCAD---KPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 328 GG~~~g~~g~~~~~---~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
||... ... .... .....+++|||+++ +|+.+ ++.+|..|+++++ ++++|+....
T Consensus 250 GG~~~-~~~-~~~~~~~~~~~~v~~yd~~~~---~W~~~--~~~~r~~~~~~~~--~~~l~v~~~~ 306 (315)
T 4asc_A 250 GGFAT-LET-ESGELVPTELNDIWRYNEEEK---KWEGV--LREIAYAAGATFL--PVRLNVLRLT 306 (315)
T ss_dssp EEEEE-EEC-TTSCEEEEEEEEEEEEETTTT---EEEEE--ESCSSCCSSCEEE--EEEECGGGSE
T ss_pred CCccc-cCc-CCccccccccCcEEEecCCCC---hhhhh--ccCCcCccceEEe--CCEEEEEEeh
Confidence 99741 000 0000 12346899999999 99998 6778999998888 9999998764
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.95 E-value=6.9e-27 Score=234.33 Aligned_cols=248 Identities=16% Similarity=0.180 Sum_probs=188.9
Q ss_pred CCCCCCcEEEccCCcchheeeeeecCCCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEeCCCC
Q 042680 30 AGGFLGSWELISQNAGISAMHTQLLPKTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYDYNKN 109 (530)
Q Consensus 30 ~~~~~g~w~~~~~~~~v~a~h~~~l~~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yDp~t~ 109 (530)
.+...++|+.+.....-+..|.++. .++++|++||.... . +....++||+.++
T Consensus 36 ~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~-----------~---------------~~~~~~~~d~~~~ 88 (301)
T 2vpj_A 36 YDPKTQEWSFLPSITRKRRYVASVS-LHDRIYVIGGYDGR-----------S---------------RLSSVECLDYTAD 88 (301)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSS-----------C---------------BCCCEEEEETTCC
T ss_pred EcCCCCeEEeCCCCChhhccccEEE-ECCEEEEEcCCCCC-----------c---------------cCceEEEEECCCC
Confidence 4455789999876666677787777 79999999997521 1 2356889999999
Q ss_pred c---EEEccccCCcccccceeccCCcEEEccCCeEEEeccCCC----CcEEEE-cCCCCCCCceEEeccccccccccCCC
Q 042680 110 A---VKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDA----FSYEYV-PVEKESNKAAIAFPFLFETQDFLERP 181 (530)
Q Consensus 110 ~---w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~----~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~ 181 (530)
+ |+.++.++..++..+++ ..+|+|||+||.+. .++|.| |.++ +|....++..
T Consensus 89 ~~~~W~~~~~~p~~r~~~~~~--------~~~~~lyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~p~--------- 148 (301)
T 2vpj_A 89 EDGVWYSVAPMNVRRGLAGAT--------TLGDMIYVSGGFDGSRRHTSMERYDPNID---QWSMLGDMQT--------- 148 (301)
T ss_dssp TTCCCEEECCCSSCCBSCEEE--------EETTEEEEECCBCSSCBCCEEEEEETTTT---EEEEEEECSS---------
T ss_pred CCCeeEECCCCCCCccceeEE--------EECCEEEEEcccCCCcccceEEEEcCCCC---eEEECCCCCC---------
Confidence 9 99999887655544442 33999999999764 368999 8875 5655443321
Q ss_pred CCCCccccccCCccceEEEecCCcEEEEeC-------ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCC
Q 042680 182 GNPKGRFRLENNLYPFVYLLPDGNVYVFAN-------NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRD 254 (530)
Q Consensus 182 ~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg-------~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~ 254 (530)
+ | +.+..+..+|+||++|| +++++||+.+++|. .+++||. +|.. .+++.
T Consensus 149 --~--r-------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~~---~~~~~-------- 204 (301)
T 2vpj_A 149 --A--R-------EGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMAT-KRSG---AGVAL-------- 204 (301)
T ss_dssp --C--C-------BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE--------
T ss_pred --C--c-------ccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCc-cccc---ceEEE--------
Confidence 1 1 23556677999999998 36899999999999 7888874 4442 22332
Q ss_pred CCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCC
Q 042680 255 TYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLG 333 (530)
Q Consensus 255 ~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g 333 (530)
.+++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.++++ +|+|||+||...
T Consensus 205 ----~~~~i~v~GG~~~~------------~~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~- 264 (301)
T 2vpj_A 205 ----LNDHIYVVGGFDGT------------AHLSSVEAYNIR--TDSWTTVTSMTTPRCYVGATVL-RGRLYAIAGYDG- 264 (301)
T ss_dssp ----ETTEEEEECCBCSS------------SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCS-
T ss_pred ----ECCEEEEEeCCCCC------------cccceEEEEeCC--CCcEEECCCCCCcccceeEEEE-CCEEEEEcCcCC-
Confidence 37899999997622 136789999998 4899987 89999999998886 999999999751
Q ss_pred CCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCccccccee
Q 042680 334 SGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANL 378 (530)
Q Consensus 334 ~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~L 378 (530)
......+++|||+++ +|+.+++|+.+|..|+++++
T Consensus 265 -------~~~~~~v~~yd~~~~---~W~~~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 265 -------NSLLSSIECYDPIID---SWEVVTSMGTQRCDAGVCVL 299 (301)
T ss_dssp -------SSBEEEEEEEETTTT---EEEEEEEEEEEEESCEEEEE
T ss_pred -------CcccccEEEEcCCCC---eEEEcCCCCcccccceEEEe
Confidence 123457899999999 99999999999999997776
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.95 E-value=9.4e-27 Score=236.02 Aligned_cols=272 Identities=15% Similarity=0.132 Sum_probs=193.7
Q ss_pred cCCCCCCCCcEEEccCCc-chheeeeeecCCCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEe
Q 042680 27 AAPAGGFLGSWELISQNA-GISAMHTQLLPKTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYD 105 (530)
Q Consensus 27 ~~~~~~~~g~w~~~~~~~-~v~a~h~~~l~~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yD 105 (530)
...++...++|....... .-+..|+++. .+++||++||...+.. + . ........+.||
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~------~--~------------~~~~~~~~~~~d 84 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVT-QQNQVYVVGGLYVDEE------N--K------------DQPLQSYFFQLD 84 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEEC-SSSCEEEEESSCC---------------------------CCCBEEEEEE
T ss_pred eEEECCCCCceecccCCccCCccceEEEE-ECCEEEEECCcccCcc------c--c------------CCCccccEEEEe
Confidence 455667789999843221 3356777777 8999999999642110 1 0 000234578999
Q ss_pred CCCCcEEEccccCCcccccceeccCCcEEEccCCeEEEeccCCC------CcEEEE-cCCCCCCCceEEecccccccccc
Q 042680 106 YNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDA------FSYEYV-PVEKESNKAAIAFPFLFETQDFL 178 (530)
Q Consensus 106 p~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~------~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~ 178 (530)
+.+++|+.++.|+..++..+++ ..+++|||+||.+. .++|+| |.++ +|....++..
T Consensus 85 ~~~~~W~~~~~~p~~r~~~~~~--------~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~------ 147 (318)
T 2woz_A 85 NVSSEWVGLPPLPSARCLFGLG--------EVDDKIYVVAGKDLQTEASLDSVLCYDPVAA---KWSEVKNLPI------ 147 (318)
T ss_dssp TTTTEEEECSCBSSCBCSCEEE--------EETTEEEEEEEEBTTTCCEEEEEEEEETTTT---EEEEECCCSS------
T ss_pred CCCCcEEECCCCCccccccceE--------EECCEEEEEcCccCCCCcccceEEEEeCCCC---CEeECCCCCC------
Confidence 9999999999988666544442 33999999999752 368999 8875 5655443311
Q ss_pred CCCCCCCccccccCCccceEEEecCCcEEEEeCc--------eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCC
Q 042680 179 ERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN--------RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLY 250 (530)
Q Consensus 179 ~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~--------~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~ 250 (530)
.| +-|..+..+|+||++||. ++++||+.+++|. .+++||. +|.. .+++.
T Consensus 148 -------~r-------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~---~~~~~---- 204 (318)
T 2woz_A 148 -------KV-------YGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK-DLAPMKT-PRSM---FGVAI---- 204 (318)
T ss_dssp -------CE-------ESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEE-EECCCSS-CCBS---CEEEE----
T ss_pred -------cc-------cccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEE-ECCCCCC-Cccc---ceEEE----
Confidence 12 346667789999999994 5899999999999 7888873 4543 22332
Q ss_pred CCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcC
Q 042680 251 LPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIING 329 (530)
Q Consensus 251 ~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG 329 (530)
.+++||++||.+.. ..++++++||+. +++|+.. +||.+|..+.++++ +|+|||+||
T Consensus 205 --------~~~~iyv~GG~~~~------------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG 261 (318)
T 2woz_A 205 --------HKGKIVIAGGVTED------------GLSASVEAFDLK--TNKWEVMTEFPQERSSISLVSL-AGSLYAIGG 261 (318)
T ss_dssp --------ETTEEEEEEEEETT------------EEEEEEEEEETT--TCCEEECCCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred --------ECCEEEEEcCcCCC------------CccceEEEEECC--CCeEEECCCCCCcccceEEEEE-CCEEEEECC
Confidence 37899999997622 124678999998 4899998 89999999988876 999999999
Q ss_pred CCCCCCCcc-cCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 330 ADLGSGGWH-CADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 330 ~~~g~~g~~-~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
........+ ........+++|||+++ +|+.+ ++.+|..|+++++ +++||+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~--~~~~r~~~~~~~~--~~~iyi~~~ 315 (318)
T 2woz_A 262 FAMIQLESKEFAPTEVNDIWKYEDDKK---EWAGM--LKEIRYASGASCL--ATRLNLFKL 315 (318)
T ss_dssp BCCBC----CCBCCBCCCEEEEETTTT---EEEEE--ESCCGGGTTCEEE--EEEEEGGGC
T ss_pred eeccCCCCceeccceeeeEEEEeCCCC---Eehhh--cccccccccceee--CCEEEEEEe
Confidence 752100000 00123457899999999 99998 7889999998888 999998753
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.95 E-value=3e-26 Score=232.29 Aligned_cols=241 Identities=17% Similarity=0.151 Sum_probs=172.9
Q ss_pred EEEEeCCCCcEEEccccC-CcccccceeccCCcEEEccCCeEEEeccCC----C------CcEEEE-cCCCCCCCceEEe
Q 042680 101 SIFYDYNKNAVKALKVQS-DTWCSSGGLSADGRLVMLSDGSFLVYGGRD----A------FSYEYV-PVEKESNKAAIAF 168 (530)
Q Consensus 101 ~~~yDp~t~~w~~l~~~~-~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~----~------~s~E~y-P~~~~~~~~~~~~ 168 (530)
.++|||.+++|....... .+++..++ ++.+++|||+||.. . ..++.| |.++ +|....
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~--------~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~---~W~~~~ 94 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSI--------VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS---EWVGLP 94 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEE--------ECSSSCEEEEESSCC-------CCCBEEEEEETTTT---EEEECS
T ss_pred eEEECCCCCceecccCCccCCccceEE--------EEECCEEEEECCcccCccccCCCccccEEEEeCCCC---cEEECC
Confidence 579999999999853321 33433333 24599999999952 1 127888 8765 454433
Q ss_pred ccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEeCc---------eEEEEeCCCCeEEEEccCCCCCCCccC
Q 042680 169 PFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN---------RSVVHDPKANKIIREFPQLPGGARSYP 239 (530)
Q Consensus 169 p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~---------~~e~yDp~tn~w~~~~p~mp~~~r~yp 239 (530)
++. . + | +-|..++.+++||++||. ++++||+.+++|. .+++||. +|..
T Consensus 95 ~~p-~----------~--r-------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-~r~~- 151 (318)
T 2woz_A 95 PLP-S----------A--R-------CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPI-KVYG- 151 (318)
T ss_dssp CBS-S----------C--B-------CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSS-CEES-
T ss_pred CCC-c----------c--c-------cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCC-cccc-
Confidence 321 1 1 1 235667779999999983 5899999999999 7888884 3442
Q ss_pred CCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeee
Q 042680 240 ATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVL 318 (530)
Q Consensus 240 ~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vv 318 (530)
.+++. .+++||++||...+. ..++++++||+. +++|+.. +|+.+|..+.+++
T Consensus 152 --~~~~~------------~~~~iyv~GG~~~~~-----------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~ 204 (318)
T 2woz_A 152 --HNVIS------------HNGMIYCLGGKTDDK-----------KCTNRVFIYNPK--KGDWKDLAPMKTPRSMFGVAI 204 (318)
T ss_dssp --CEEEE------------ETTEEEEECCEESSS-----------CBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEE
T ss_pred --cEEEE------------ECCEEEEEcCCCCCC-----------CccceEEEEcCC--CCEEEECCCCCCCcccceEEE
Confidence 22331 379999999975221 246789999998 4899998 9999999999888
Q ss_pred ecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCCCCCCccc
Q 042680 319 LPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDNDGYFEF 398 (530)
Q Consensus 319 LpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~ 398 (530)
+ +|+|||+||... ......+++|||+++ +|+.+++++.+|..|+++++ +++|||.||....... .
T Consensus 205 ~-~~~iyv~GG~~~--------~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~-~ 269 (318)
T 2woz_A 205 H-KGKIVIAGGVTE--------DGLSASVEAFDLKTN---KWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMIQLE-S 269 (318)
T ss_dssp E-TTEEEEEEEEET--------TEEEEEEEEEETTTC---CEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCBC----
T ss_pred E-CCEEEEEcCcCC--------CCccceEEEEECCCC---eEEECCCCCCcccceEEEEE--CCEEEEECCeeccCCC-C
Confidence 6 999999999752 112447899999999 99999999999999998877 9999999996532100 0
Q ss_pred cCC--CCcceEEEEcCCCCCC
Q 042680 399 AKF--PTELRLEKFTPPYLAP 417 (530)
Q Consensus 399 ~~~--~t~~~vE~y~Ppyl~~ 417 (530)
+.+ .....+++|+|.....
T Consensus 270 ~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 270 KEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp -CCBCCBCCCEEEEETTTTEE
T ss_pred ceeccceeeeEEEEeCCCCEe
Confidence 110 0134699999987643
No 14
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.94 E-value=3.2e-26 Score=231.75 Aligned_cols=239 Identities=15% Similarity=0.116 Sum_probs=173.0
Q ss_pred EEEEeCCCCcEEEccccC--CcccccceeccCCcEEEccCCeEEEeccCC----C------CcEEEE-cCCCCCCCceEE
Q 042680 101 SIFYDYNKNAVKALKVQS--DTWCSSGGLSADGRLVMLSDGSFLVYGGRD----A------FSYEYV-PVEKESNKAAIA 167 (530)
Q Consensus 101 ~~~yDp~t~~w~~l~~~~--~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~----~------~s~E~y-P~~~~~~~~~~~ 167 (530)
.+.|||.+++|+. ..++ ..++..++ ++.+++|||+||.. . ..++.| |.++ +|...
T Consensus 15 ~~~yd~~~~~W~~-~~~~~p~~r~~~~~--------~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~---~W~~~ 82 (315)
T 4asc_A 15 AVAYDPAANECYC-ASLSSQVPKNHVSL--------VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS---EWLGM 82 (315)
T ss_dssp EEEEETTTTEEEE-EECCCCSCSSEEEE--------ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT---EEEEC
T ss_pred eEEECCCCCeEec-CCCCCCCCccceEE--------EEECCEEEEEcCcccCCCCCccccccceEEecCCCC---eEEEC
Confidence 6799999999987 4443 23333333 24499999999951 1 137888 8875 45433
Q ss_pred eccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEeCc----------eEEEEeCCCCeEEEEccCCCCCCCc
Q 042680 168 FPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN----------RSVVHDPKANKIIREFPQLPGGARS 237 (530)
Q Consensus 168 ~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~----------~~e~yDp~tn~w~~~~p~mp~~~r~ 237 (530)
.++. . .| +-|..+..+++||++||. ++++||+.+++|. .+++||. +|.
T Consensus 83 ~~~p-~------------~r-------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-~r~ 140 (315)
T 4asc_A 83 PPLP-S------------PR-------CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG-ESDPLPY-VVY 140 (315)
T ss_dssp CCBS-S------------CE-------ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEE-ECCCCSS-CCB
T ss_pred CCCC-c------------ch-------hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEe-ECCCCCC-ccc
Confidence 3321 1 12 235667779999999993 4899999999999 7888884 444
Q ss_pred cCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCcccccee
Q 042680 238 YPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADG 316 (530)
Q Consensus 238 yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~ 316 (530)
. .+++. .+++||++||...+. ..++++++||+. +++|+.. +||.+|..+.+
T Consensus 141 ~---~~~~~------------~~~~iyv~GG~~~~~-----------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~ 192 (315)
T 4asc_A 141 G---HTVLS------------HMDLVYVIGGKGSDR-----------KCLNKMCVYDPK--KFEWKELAPMQTARSLFGA 192 (315)
T ss_dssp S---CEEEE------------ETTEEEEECCBCTTS-----------CBCCCEEEEETT--TTEEEECCCCSSCCBSCEE
T ss_pred c---eeEEE------------ECCEEEEEeCCCCCC-----------cccceEEEEeCC--CCeEEECCCCCCchhceEE
Confidence 3 22332 378999999974221 346789999998 4899998 89999999998
Q ss_pred eeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCCCCCCc
Q 042680 317 VLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDNDGYF 396 (530)
Q Consensus 317 vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~ 396 (530)
+++ +++|||+||... ......+++|||+++ +|+.+++++.+|..|+++++ +++|||.||......
T Consensus 193 ~~~-~~~iyv~GG~~~--------~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~- 257 (315)
T 4asc_A 193 TVH-DGRIIVAAGVTD--------TGLTSSAEVYSITDN---KWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLET- 257 (315)
T ss_dssp EEE-TTEEEEEEEECS--------SSEEEEEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEEC-
T ss_pred EEE-CCEEEEEeccCC--------CCccceEEEEECCCC---eEEECCCCCCcccceeEEEE--CCEEEEECCccccCc-
Confidence 886 999999999752 112457899999999 99999999999999998877 999999999632100
Q ss_pred cccCC--CCcceEEEEcCCCCC
Q 042680 397 EFAKF--PTELRLEKFTPPYLA 416 (530)
Q Consensus 397 ~~~~~--~t~~~vE~y~Ppyl~ 416 (530)
..+.+ ....++|+|+|..-.
T Consensus 258 ~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 258 ESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp TTSCEEEEEEEEEEEEETTTTE
T ss_pred CCccccccccCcEEEecCCCCh
Confidence 00111 013469999998754
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.90 E-value=7.8e-23 Score=228.32 Aligned_cols=249 Identities=16% Similarity=0.157 Sum_probs=163.8
Q ss_pred EEEEeCCCCcEEEccccCCcccccceeccCCcEEEcc-CCeEEEeccCCC----------CcEEEE-cCCCCCCCceEEe
Q 042680 101 SIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLS-DGSFLVYGGRDA----------FSYEYV-PVEKESNKAAIAF 168 (530)
Q Consensus 101 ~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~-dG~v~VvGG~~~----------~s~E~y-P~~~~~~~~~~~~ 168 (530)
...|||.+++|+++..++... .+++ .++ +|+|||+||.+. ..+++| |.++ +|....
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~-~~~a--------v~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~---~w~~~~ 235 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVP-AAAA--------IEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG---IVSDRT 235 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCC-SEEE--------EETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC---CBCCCE
T ss_pred cccCCCCCCeeeeeccCCCCc-eeEE--------EEecCCEEEEEecccccccccCCCCeEEEEEEeCCCC---cEEeCc
Confidence 456899999999998886532 2222 355 999999999753 157888 8875 454333
Q ss_pred ccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEeCc---eEEEEeCCCCeEEEEccCCCCCCCccCCCceEe
Q 042680 169 PFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN---RSVVHDPKANKIIREFPQLPGGARSYPATGTSV 245 (530)
Q Consensus 169 p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~---~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~sv 245 (530)
++.. ++.++ ...+.++.||+||++||. ++++||+.+++|+ .+++||. +|.+ .+++
T Consensus 236 ~~~~-----------~~~~~------~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~-~~~~~~~-~R~~---~s~~ 293 (656)
T 1k3i_A 236 VTVT-----------KHDMF------CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWI-PGPDMQV-ARGY---QSSA 293 (656)
T ss_dssp EEEC-----------SCCCS------SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEE-ECCCCSS-CCSS---CEEE
T ss_pred ccCC-----------CCCCc------cccccCCCCCCEEEeCCCCCCceEEecCcCCcee-ECCCCCc-cccc---cceE
Confidence 3311 11111 122455689999999994 6899999999999 7899984 5665 3344
Q ss_pred eccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec------CCCCc---------
Q 042680 246 LLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE------KMPAP--------- 310 (530)
Q Consensus 246 mlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~------~M~~~--------- 310 (530)
.++ +++|||+||...+. ..++++++|||. +++|+.. +|+.+
T Consensus 294 ~~~-----------dg~iyv~GG~~~~~-----------~~~~~~e~yd~~--t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 294 TMS-----------DGRVFTIGGSWSGG-----------VFEKNGEVYSPS--SKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp ECT-----------TSCEEEECCCCCSS-----------SCCCCEEEEETT--TTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred Eec-----------CCeEEEEeCcccCC-----------cccccceEeCCC--CCcceeCCCccccccccccccceeecC
Confidence 332 79999999953121 134567777776 3667652 33332
Q ss_pred ------------------------------------------------cccceeeee--cCCeEEEEcCCCCCCCCcccC
Q 042680 311 ------------------------------------------------RTMADGVLL--PNGEVLIINGADLGSGGWHCA 340 (530)
Q Consensus 311 ------------------------------------------------R~~~~~vvL--pdG~VlViGG~~~g~~g~~~~ 340 (530)
|..+.++++ .+|+|||+||... ..+. ..
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~-~~~~-~~ 427 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD-YQDS-DA 427 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS-SSSS-BC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC-CCCC-Cc
Confidence 234555543 4899999999642 1110 01
Q ss_pred CCCCcccEEecCCCCCCCceEEec--CCCCCCcccccceecCCCeEEEcCCCCCCCCccccCCCCcceEEEEcCCCC
Q 042680 341 DKPSLKPMLYRPNAPEGQRFAELA--PTDIPRMYHSVANLLPDGKVFVGGSNDNDGYFEFAKFPTELRLEKFTPPYL 415 (530)
Q Consensus 341 ~~p~~~~eiYDP~t~~g~~Wt~la--~~~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~~~~~t~~~vE~y~Ppyl 415 (530)
.+....+++|||.++ +|+.+. +|+.+|..|++ ++++||+|||.||..... .+.+.. ...++|+|+|..-
T Consensus 428 ~~~~~~v~~yd~~~~---~W~~~~~~~mp~~R~~~~~-~~l~~g~i~v~GG~~~~~-~~~~~~-~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 428 TTNAHIITLGEPGTS---PNTVFASNGLYFARTFHTS-VVLPDGSTFITGGQRRGI-PFEDST-PVFTPEIYVPEQD 498 (656)
T ss_dssp CCCEEEEECCSTTSC---CEEEECTTCCSSCCBSCEE-EECTTSCEEEECCBSBCC-TTCCCS-BCCCCEEEEGGGT
T ss_pred CCcceEEEcCCCCCC---CeeEEccCCCCCCcccCCe-EECCCCCEEEECCcccCc-CcCCCC-cccceEEEcCCCC
Confidence 111236889999999 999987 99999999975 455899999999964321 001111 1357999999763
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.90 E-value=2.5e-22 Score=226.30 Aligned_cols=260 Identities=10% Similarity=0.070 Sum_probs=172.6
Q ss_pred cEEEccCCcchheeeeeecCCCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEeCCCCcEEEcc
Q 042680 36 SWELISQNAGISAMHTQLLPKTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYDYNKNAVKALK 115 (530)
Q Consensus 36 ~w~~~~~~~~v~a~h~~~l~~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yDp~t~~w~~l~ 115 (530)
+|.........+.-|+++ .+++||++||... . +.+..++||+.+++|+.++
T Consensus 378 ~~~~~~~~p~rr~g~~~~--~~~~iyv~GG~~~--~-------------------------~~~~v~~yd~~~~~W~~~~ 428 (695)
T 2zwa_A 378 QLLECECPINRKFGDVDV--AGNDVFYMGGSNP--Y-------------------------RVNEILQLSIHYDKIDMKN 428 (695)
T ss_dssp EEEECCCTTCCBSCEEEE--CSSCEEEECCBSS--S-------------------------BCCCEEEEEECSSCEEEEE
T ss_pred eEeccCCCCCCceeEEEE--ECCEEEEECCCCC--C-------------------------CcCcEEEEECCCCeEEEec
Confidence 344432222334444444 5899999999642 1 1255789999999999998
Q ss_pred -c-----cC-CcccccceeccCCcEEEcc-CCeEEEeccCCC-----CcEEEE-cCCCCCCCceEEeccccccccccCCC
Q 042680 116 -V-----QS-DTWCSSGGLSADGRLVMLS-DGSFLVYGGRDA-----FSYEYV-PVEKESNKAAIAFPFLFETQDFLERP 181 (530)
Q Consensus 116 -~-----~~-~~~~~~~~~l~dG~l~~L~-dG~v~VvGG~~~-----~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~ 181 (530)
. |+ .+.+++.+ .+. +|+|||+||.+. .++|+| |.++ +|....++..
T Consensus 429 ~~~p~~~~p~~R~~hs~~--------~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~---~W~~~~~~p~--------- 488 (695)
T 2zwa_A 429 IEVSSSEVPVARMCHTFT--------TISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR---EWSMIKSLSH--------- 488 (695)
T ss_dssp CCCCCSCCCCCCBSCEEE--------EETTTTEEEEECCBSSTTCBCCCCEEEETTTT---EEEECCCCSB---------
T ss_pred cCCCCCCCCccccceEEE--------EEccCCEEEEEcCCCCCCCccccEEEEeCCCC---cEEECCCCCC---------
Confidence 5 44 44454443 344 999999999864 368999 8875 4655444321
Q ss_pred CCCCccccccCCccceEEEe-cCCcEEEEeCc----eEEEEeCCCCeEEEEccC---CCCCCCccCCCceEeeccCCCCC
Q 042680 182 GNPKGRFRLENNLYPFVYLL-PDGNVYVFANN----RSVVHDPKANKIIREFPQ---LPGGARSYPATGTSVLLPLYLPR 253 (530)
Q Consensus 182 ~~~~~~~~~~~~~Yp~~~ll-p~G~lfv~Gg~----~~e~yDp~tn~w~~~~p~---mp~~~r~yp~~g~svmlpl~~~~ 253 (530)
+ | +-|..++ .+|+||++||. ++++||+.+++|. .+++ +|. +|.. .+++.+.
T Consensus 489 --~--R-------~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~-~~~~~g~~p~-~r~~---~~a~v~~----- 547 (695)
T 2zwa_A 489 --T--R-------FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK-DVTPKDEFFQ-NSLV---SAGLEFD----- 547 (695)
T ss_dssp --C--C-------BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEE-ECCCSSGGGG-SCCB---SCEEEEE-----
T ss_pred --C--c-------ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceE-EccCCCCCCC-cccc---eeEEEEe-----
Confidence 1 2 2355555 59999999996 6899999999999 6765 442 3332 2223221
Q ss_pred CCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCc------ceec-CC-CCccccceeeeecCCeEE
Q 042680 254 DTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPE------WKIE-KM-PAPRTMADGVLLPNGEVL 325 (530)
Q Consensus 254 ~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~------W~~~-~M-~~~R~~~~~vvLpdG~Vl 325 (530)
. ..++|||+||...+. ...++++++||+.. ++ |+.. +| +.+|..+.++++.||+||
T Consensus 548 --~--~~~~iyv~GG~~~~~----------~~~~~~v~~yd~~~--~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iy 611 (695)
T 2zwa_A 548 --P--VSKQGIILGGGFMDQ----------TTVSDKAIIFKYDA--ENATEPITVIKKLQHPLFQRYGSQIKYITPRKLL 611 (695)
T ss_dssp --T--TTTEEEEECCBCTTS----------SCBCCEEEEEEECT--TCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEE
T ss_pred --C--CCCEEEEECCcCCCC----------CeeeCcEEEEEccC--CccccceEEEEcCCCCCCCcccceEEEeCCCEEE
Confidence 0 138999999975221 12467899999984 77 8876 66 589999998887449999
Q ss_pred EEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCC--------CCcccccceecCCCeEEEcCCCC
Q 042680 326 IINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDI--------PRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 326 ViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~--------~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
|+||..... .......+++|||.++ +|+.+. ++. .|..|++ +.+.||+|||.||..
T Consensus 612 v~GG~~~~~-----~~~~~~~v~~yd~~t~---~W~~~~-~p~~~~~~~~p~~~gh~~-~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 612 IVGGTSPSG-----LFDRTNSIISLDPLSE---TLTSIP-ISRRIWEDHSLMLAGFSL-VSTSMGTIHIIGGGA 675 (695)
T ss_dssp EECCBCSSC-----CCCTTTSEEEEETTTT---EEEECC-CCHHHHHHSCCCCSSCEE-ECC---CEEEECCEE
T ss_pred EECCccCCC-----CCCCCCeEEEEECCCC---eEEEee-ccccccCCCCccceeeeE-EEeCCCEEEEEeCCc
Confidence 999975211 0123568999999999 999542 211 2455774 445678999999964
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.88 E-value=1.5e-21 Score=200.28 Aligned_cols=254 Identities=12% Similarity=0.114 Sum_probs=166.1
Q ss_pred CCcEEEccCCc-chheeeeeecCCCCeEEEEeeeccCcCccCCCCCCCCccccCCCccccccccCceeEEEEeCCCCcEE
Q 042680 34 LGSWELISQNA-GISAMHTQLLPKTDQIAVFDASVWHISRLQLPQEKRPCFWHHNKLTNQTAEDCWCHSIFYDYNKNAVK 112 (530)
Q Consensus 34 ~g~w~~~~~~~-~v~a~h~~~l~~~gkv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~~~yDp~t~~w~ 112 (530)
..+|+.+..+. .-+..|+++. .+++||++||..... +++ . .+.+..++||+.+++|+
T Consensus 42 ~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~------~~~-~--------------~~~~~v~~yd~~~~~W~ 99 (357)
T 2uvk_A 42 DKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNS------EGL-T--------------QVFNDVHKYNPKTNSWV 99 (357)
T ss_dssp SCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECT------TSC-E--------------EECCCEEEEETTTTEEE
T ss_pred CCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCC------Ccc-c--------------eeeccEEEEeCCCCcEE
Confidence 37899998766 4677787777 799999999973210 010 0 13467899999999999
Q ss_pred EccccC-CcccccceeccCCcEEEccCCeEEEeccCCC--------------------------------------CcEE
Q 042680 113 ALKVQS-DTWCSSGGLSADGRLVMLSDGSFLVYGGRDA--------------------------------------FSYE 153 (530)
Q Consensus 113 ~l~~~~-~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~--------------------------------------~s~E 153 (530)
.++.|. ..++..+++ ..+|+|||+||.+. .++|
T Consensus 100 ~~~~~~p~~r~~~~~~--------~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 171 (357)
T 2uvk_A 100 KLMSHAPMGMAGHVTF--------VHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLL 171 (357)
T ss_dssp ECSCCCSSCCSSEEEE--------EETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEE
T ss_pred ECCCCCCcccccceEE--------EECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEE
Confidence 999887 444443332 34999999999752 4789
Q ss_pred EE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEeCc--------eEEEEeC--CCC
Q 042680 154 YV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN--------RSVVHDP--KAN 222 (530)
Q Consensus 154 ~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~--------~~e~yDp--~tn 222 (530)
+| |.++ +|....++... ..+-+..+..+++||++||. .+++||+ .++
T Consensus 172 ~yd~~~~---~W~~~~~~p~~-------------------~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~ 229 (357)
T 2uvk_A 172 SFDPSTQ---QWSYAGESPWY-------------------GTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL 229 (357)
T ss_dssp EEETTTT---EEEEEEECSSC-------------------CCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---C
T ss_pred EEeCCCC---cEEECCCCCCC-------------------CcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC
Confidence 99 8875 56655443210 11225567779999999993 4677876 999
Q ss_pred eEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccccccc-----ccccccCCcEEEEEcCC
Q 042680 223 KIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEE-----KRFVNALDDCARMVVTS 297 (530)
Q Consensus 223 ~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~-----~~~~~a~~s~~~~dp~~ 297 (530)
+|. .+++||. +|... ..+++. .+++|||+||.+.......... ......+.++++||+.
T Consensus 230 ~W~-~~~~~~~-~~~~~-~~~~~~------------~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~- 293 (357)
T 2uvk_A 230 KWN-KLAPVSS-PDGVA-GGFAGI------------SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH- 293 (357)
T ss_dssp EEE-ECCCSST-TTCCB-SCEEEE------------ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-
T ss_pred cEE-ecCCCCC-Ccccc-cceEEE------------ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC-
Confidence 999 7888863 33221 122332 3789999999752210000000 0001224578999998
Q ss_pred CCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCC
Q 042680 298 PNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTD 367 (530)
Q Consensus 298 ~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~ 367 (530)
+++|+.. +||.+|..+.++++ +|+|||+||.+.. ......+++|+-+++ +|.++.+.+
T Consensus 294 -~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~-------~~~~~~v~~l~~~~~---~~~~~~~~~ 352 (357)
T 2uvk_A 294 -NGKWDKSGELSQGRAYGVSLPW-NNSLLIIGGETAG-------GKAVTDSVLITVKDN---KVTVQNLEH 352 (357)
T ss_dssp ----CEEEEECSSCCBSSEEEEE-TTEEEEEEEECGG-------GCEEEEEEEEEC-CC---SCEEEC---
T ss_pred -CCceeeCCCCCCCcccceeEEe-CCEEEEEeeeCCC-------CCEeeeEEEEEEcCc---EeEeeeccc
Confidence 4899998 99999999988875 9999999997521 112457888999999 999876554
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.84 E-value=8.8e-20 Score=205.56 Aligned_cols=213 Identities=15% Similarity=0.166 Sum_probs=152.4
Q ss_pred cCCeEEEeccCCC---CcEEEE-cCCCCCCCceEEe-ccccccccccCCCCCCCccccccCCccceEEEec--CCcEEEE
Q 042680 137 SDGSFLVYGGRDA---FSYEYV-PVEKESNKAAIAF-PFLFETQDFLERPGNPKGRFRLENNLYPFVYLLP--DGNVYVF 209 (530)
Q Consensus 137 ~dG~v~VvGG~~~---~s~E~y-P~~~~~~~~~~~~-p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp--~G~lfv~ 209 (530)
.+++|||+||.+. .++++| |.++ +|.... ++-... .+..| +-|..++. +|+||++
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~---~W~~~~~~~p~~~--------~p~~R-------~~hs~~~~~~~~~lyv~ 457 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYD---KIDMKNIEVSSSE--------VPVAR-------MCHTFTTISRNNQLLLI 457 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSS---CEEEEECCCCCSC--------CCCCC-------BSCEEEEETTTTEEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCC---eEEEeccCCCCCC--------CCccc-------cceEEEEEccCCEEEEE
Confidence 4999999999753 468899 8875 455443 321000 01112 23555666 9999999
Q ss_pred eC--------ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccc
Q 042680 210 AN--------NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEK 281 (530)
Q Consensus 210 Gg--------~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~ 281 (530)
|| +++++||+.+++|. .+++||. +|.. .+++++ .+++|||+||.+..
T Consensus 458 GG~~~~~~~~~dv~~yd~~t~~W~-~~~~~p~-~R~~---h~~~~~-----------~~~~iyv~GG~~~~--------- 512 (695)
T 2zwa_A 458 GGRKAPHQGLSDNWIFDMKTREWS-MIKSLSH-TRFR---HSACSL-----------PDGNVLILGGVTEG--------- 512 (695)
T ss_dssp CCBSSTTCBCCCCEEEETTTTEEE-ECCCCSB-CCBS---CEEEEC-----------TTSCEEEECCBCSS---------
T ss_pred cCCCCCCCccccEEEEeCCCCcEE-ECCCCCC-Cccc---ceEEEE-----------cCCEEEEECCCCCC---------
Confidence 99 35899999999999 7888883 4543 333322 27999999997511
Q ss_pred cccccCCcEEEEEcCCCCCcceec-C---CCCccccceeeeecC---CeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 282 RFVNALDDCARMVVTSPNPEWKIE-K---MPAPRTMADGVLLPN---GEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 282 ~~~~a~~s~~~~dp~~~~~~W~~~-~---M~~~R~~~~~vvLpd---G~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
. ++++||+. +++|+.. + ||.+|..++++++ + |+|||+||.... .......+++|||.+
T Consensus 513 ---~---~v~~yd~~--t~~W~~~~~~g~~p~~r~~~~a~v~-~~~~~~iyv~GG~~~~------~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 513 ---P---AMLLYNVT--EEIFKDVTPKDEFFQNSLVSAGLEF-DPVSKQGIILGGGFMD------QTTVSDKAIIFKYDA 577 (695)
T ss_dssp ---C---SEEEEETT--TTEEEECCCSSGGGGSCCBSCEEEE-ETTTTEEEEECCBCTT------SSCBCCEEEEEEECT
T ss_pred ---C---CEEEEECC--CCceEEccCCCCCCCcccceeEEEE-eCCCCEEEEECCcCCC------CCeeeCcEEEEEccC
Confidence 1 78999998 4999986 4 9999999987775 5 899999997521 112345789999999
Q ss_pred CCCCc------eEEecCC-CCCCcccccceecCCCeEEEcCCCCCCCCccccCCCCcceEEEEcCCCCC
Q 042680 355 PEGQR------FAELAPT-DIPRMYHSVANLLPDGKVFVGGSNDNDGYFEFAKFPTELRLEKFTPPYLA 416 (530)
Q Consensus 355 ~~g~~------Wt~la~~-~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~~~~~t~~~vE~y~Ppyl~ 416 (530)
+ + |+.+.++ ..+|..|+++++ .||+|||.||..... .......+|+|+|....
T Consensus 578 ~---~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~-----~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 578 E---NATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSG-----LFDRTNSIISLDPLSET 637 (695)
T ss_dssp T---CSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSC-----CCCTTTSEEEEETTTTE
T ss_pred C---ccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCC-----CCCCCCeEEEEECCCCe
Confidence 9 8 8988886 589999987766 339999999964321 11113569999998754
No 19
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.79 E-value=0.012 Score=57.80 Aligned_cols=106 Identities=9% Similarity=-0.075 Sum_probs=53.4
Q ss_pred eeEEEEeCCCCcEEEccccCCcccccceeccCCcEEEccCCe-EEEeccCCCCcEEEE-cCCCCCCCceEEecccccccc
Q 042680 99 CHSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGS-FLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQD 176 (530)
Q Consensus 99 a~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~-v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d 176 (530)
.....+|+.+.+....-..... ..+.+ .-+||+ +|+.+.. ...+.+| +.+. +.....+.- ...
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~~-~~~~~--------~s~dg~~l~v~~~~-~~~v~~~d~~~~---~~~~~~~~~-~~~- 133 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDLK-PFGAT--------INNTTQTLWFGNTV-NSAVTAIDAKTG---EVKGRLVLD-DRK- 133 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESSC-CCSEE--------EETTTTEEEEEETT-TTEEEEEETTTC---CEEEEEESC-CCC-
T ss_pred ccEEEEcCCCCeEEEEEecCCC-cceEE--------ECCCCCEEEEEecC-CCEEEEEeCCCC---eeEEEEecC-CCc-
Confidence 5578899988875443222211 11222 245776 5555543 3467777 6653 121122110 000
Q ss_pred ccCCCCCCCccccccCCccce-EEEecCCc-EEEEe---CceEEEEeCCCCeEEEEcc
Q 042680 177 FLERPGNPKGRFRLENNLYPF-VYLLPDGN-VYVFA---NNRSVVHDPKANKIIREFP 229 (530)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~Yp~-~~llp~G~-lfv~G---g~~~e~yDp~tn~w~~~~p 229 (530)
.+. . .....|+ +...++|+ ||+.+ .....+||+.+++..+.++
T Consensus 134 ------~~~--~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 134 ------RTE--E--VRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp ------CCS--S--CCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred ------ccc--c--cCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 000 0 0112243 34457876 66665 2458899999998775554
No 20
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.53 E-value=0.019 Score=56.44 Aligned_cols=143 Identities=12% Similarity=0.063 Sum_probs=81.2
Q ss_pred EEEecCCcEEEEeC---ceEEEEeCCCCeEEEEccCCCC--CCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCC
Q 042680 198 VYLLPDGNVYVFAN---NRSVVHDPKANKIIREFPQLPG--GARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVRE 272 (530)
Q Consensus 198 ~~llp~G~lfv~Gg---~~~e~yDp~tn~w~~~~p~mp~--~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~ 272 (530)
+..++||++++... ..+..+|+... ....++--.+ .....+. +.+. + .++.++++...+
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~~Gk-~l~~~~~~~~~~~~~~~~~-~v~~-~-----------~~G~~lv~~~~~-- 145 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNMKGE-VLSKTEFETGIERPHAQFR-QINK-N-----------KKGNYLVPLFAT-- 145 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECTTSC-EEEEEEECCSCSSGGGSCS-CCEE-C-----------TTSCEEEEETTT--
T ss_pred cEECCCCCEEEEecCCCCEEEEEeCCCC-EEEEEeccCCCCccccccc-CceE-C-----------CCCCEEEEecCC--
Confidence 34678999998753 36777898544 3323321011 0111111 2222 2 267888775422
Q ss_pred ccccccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecC
Q 042680 273 GLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRP 352 (530)
Q Consensus 273 ~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP 352 (530)
..+.+||+. ..-.|+...-. + ..++..+++|+++|++... ..+..+||
T Consensus 146 ---------------~~v~~~d~~-G~~~w~~~~~~--~-~~~~~~~~~g~~~v~~~~~-------------~~v~~~d~ 193 (276)
T 3no2_A 146 ---------------SEVREIAPN-GQLLNSVKLSG--T-PFSSAFLDNGDCLVACGDA-------------HCFVQLNL 193 (276)
T ss_dssp ---------------TEEEEECTT-SCEEEEEECSS--C-CCEEEECTTSCEEEECBTT-------------SEEEEECT
T ss_pred ---------------CEEEEECCC-CCEEEEEECCC--C-ccceeEcCCCCEEEEeCCC-------------CeEEEEeC
Confidence 246778886 45678875211 1 2345667999999987543 15789999
Q ss_pred CCCCCCceEEecC-CCCCCc-ccccceecCCCeEEEcCC
Q 042680 353 NAPEGQRFAELAP-TDIPRM-YHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 353 ~t~~g~~Wt~la~-~~~~R~-yHS~a~LLpdGrVlv~GG 389 (530)
++.. ..|+.-.. ..-.|+ +.+.+.+++||.+||+..
T Consensus 194 ~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 194 ESNR-IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp TTCC-EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred cCCc-EEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 8651 14664321 122233 334566789999999973
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.52 E-value=0.058 Score=53.83 Aligned_cols=227 Identities=14% Similarity=0.076 Sum_probs=117.9
Q ss_pred eEEEEeCCCCcE-EEccccCCcccccceeccCCcEEEc-cCCeEEEeccCCCCcEEEE-cCCCCCCCceEEecccccccc
Q 042680 100 HSIFYDYNKNAV-KALKVQSDTWCSSGGLSADGRLVML-SDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQD 176 (530)
Q Consensus 100 ~~~~yDp~t~~w-~~l~~~~~~~~~~~~~l~dG~l~~L-~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d 176 (530)
....+|+.+.+. ..+......+ +- ++ +||++||....+ ..+.++ +.+. +-....+.- .
T Consensus 65 ~v~viD~~t~~~~~~i~~~~~p~--~i---------~~~~~g~lyv~~~~~-~~v~~iD~~t~---~~~~~i~~g-~--- 125 (328)
T 3dsm_A 65 VIFAIDINTFKEVGRITGFTSPR--YI---------HFLSDEKAYVTQIWD-YRIFIINPKTY---EITGYIECP-D--- 125 (328)
T ss_dssp EEEEEETTTCCEEEEEECCSSEE--EE---------EEEETTEEEEEEBSC-SEEEEEETTTT---EEEEEEECT-T---
T ss_pred EEEEEECcccEEEEEcCCCCCCc--EE---------EEeCCCeEEEEECCC-CeEEEEECCCC---eEEEEEEcC-C---
Confidence 467889988876 3343222221 11 23 688999887433 456667 6653 111111110 0
Q ss_pred ccCCCCCCCccccccCCccceEEEecCCcEEEEe---CceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCC
Q 042680 177 FLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFA---NNRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPR 253 (530)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~G---g~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~ 253 (530)
... ..-.|...++.+|+||+.. ++...++|+.+++..+.++. . ..|. +..+ .
T Consensus 126 -------~~~-----~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g----~~p~-~i~~----~--- 180 (328)
T 3dsm_A 126 -------MDM-----ESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI-G----IQPT-SLVM----D--- 180 (328)
T ss_dssp -------CCT-----TTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-S----SCBC-CCEE----C---
T ss_pred -------ccc-----cCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-C----CCcc-ceEE----c---
Confidence 000 0013544455799999985 46789999999998765542 1 1222 2221 1
Q ss_pred CCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCC-eEEEEcCCC
Q 042680 254 DTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNG-EVLIINGAD 331 (530)
Q Consensus 254 ~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG-~VlViGG~~ 331 (530)
.++++|++.-...... .+......+.+||+.. .+.... .++....-..+.+-||| ++|++++
T Consensus 181 -----~dG~l~v~~~~~~~~~-------~~~~~~~~v~~id~~t--~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-- 244 (328)
T 3dsm_A 181 -----KYNKMWTITDGGYEGS-------PYGYEAPSLYRIDAET--FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-- 244 (328)
T ss_dssp -----TTSEEEEEBCCBCTTC-------SSCBCCCEEEEEETTT--TEEEEEEECCTTCCCEEEEECTTSCEEEEESS--
T ss_pred -----CCCCEEEEECCCccCC-------ccccCCceEEEEECCC--CeEEEEEecCCCCCceeEEEecCCCEEEEEcc--
Confidence 2688888753221100 0001135688899863 444333 44433323344455654 5666553
Q ss_pred CCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCC-CCcccccceecC-CCeEEEcCCCCCCCCccccCCCCcceEEE
Q 042680 332 LGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDI-PRMYHSVANLLP-DGKVFVGGSNDNDGYFEFAKFPTELRLEK 409 (530)
Q Consensus 332 ~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~-~R~yHS~a~LLp-dGrVlv~GG~~~~~~~~~~~~~t~~~vE~ 409 (530)
++.+||+++. +.....-... .+.-++.+ +-| +|+|||+.... |....+|.+
T Consensus 245 --------------~v~~~d~~t~---~~~~~~~~~~~~~~p~gi~-vdp~~g~lyva~~~~---------y~~~~~V~v 297 (328)
T 3dsm_A 245 --------------DIWRMPVEAD---RVPVRPFLEFRDTKYYGLT-VNPNNGEVYVADAID---------YQQQGIVYR 297 (328)
T ss_dssp --------------SEEEEETTCS---SCCSSCSBCCCSSCEEEEE-ECTTTCCEEEEECTT---------SSSEEEEEE
T ss_pred --------------EEEEEECCCC---ceeeeeeecCCCCceEEEE-EcCCCCeEEEEcccc---------cccCCEEEE
Confidence 3568999887 5421111111 12233333 456 89999997321 111346888
Q ss_pred EcCC
Q 042680 410 FTPP 413 (530)
Q Consensus 410 y~Pp 413 (530)
|+|.
T Consensus 298 ~d~~ 301 (328)
T 3dsm_A 298 YSPQ 301 (328)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 9876
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.30 E-value=0.15 Score=50.52 Aligned_cols=137 Identities=11% Similarity=0.104 Sum_probs=77.7
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...|+|+.++.|+ ....+||..+++....+.. ...+.... ..- .+++++++|+.+
T Consensus 171 ~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~-----h~~~v~~l-~~s-----------pd~~~l~s~s~d------ 227 (321)
T 3ow8_A 171 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG-----HAMPIRSL-TFS-----------PDSQLLVTASDD------ 227 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCCCEE-EEC-----------TTSCEEEEECTT------
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-----cCCceeEE-EEc-----------CCCCEEEEEcCC------
Confidence 4457999999987 4688999999986644421 11121111 221 267888988864
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAP 355 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~ 355 (530)
..+..+|... .+.... .-.... -.+...-|||+.++.++.+. ++.+||..+.
T Consensus 228 -----------g~i~iwd~~~--~~~~~~~~~h~~~-v~~~~~sp~~~~l~s~s~D~-------------~v~iwd~~~~ 280 (321)
T 3ow8_A 228 -----------GYIKIYDVQH--ANLAGTLSGHASW-VLNVAFCPDDTHFVSSSSDK-------------SVKVWDVGTR 280 (321)
T ss_dssp -----------SCEEEEETTT--CCEEEEECCCSSC-EEEEEECTTSSEEEEEETTS-------------CEEEEETTTT
T ss_pred -----------CeEEEEECCC--cceeEEEcCCCCc-eEEEEECCCCCEEEEEeCCC-------------cEEEEeCCCC
Confidence 1245677653 222211 111111 22334458999999988651 5789998776
Q ss_pred CCCceE-EecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 356 EGQRFA-ELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 356 ~g~~Wt-~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
+-. .+... ...-......|||+.++.||..
T Consensus 281 ---~~~~~~~~h---~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 281 ---TCVHTFFDH---QDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp ---EEEEEECCC---SSCEEEEEECTTSSEEEEEETT
T ss_pred ---EEEEEEcCC---CCcEEEEEECCCCCEEEEEeCC
Confidence 322 22111 1111123356899999998853
No 23
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.03 E-value=0.066 Score=52.82 Aligned_cols=107 Identities=10% Similarity=-0.003 Sum_probs=51.7
Q ss_pred eeEEEEeCCCCcEEEccccC--CcccccceeccCCcEEEccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccc
Q 042680 99 CHSIFYDYNKNAVKALKVQS--DTWCSSGGLSADGRLVMLSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQ 175 (530)
Q Consensus 99 a~~~~yDp~t~~w~~l~~~~--~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~ 175 (530)
.....||..+++++.+.... .....+.+ .-+||+.+++.+....++.+| ...+ ........+...
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a--------~spdg~~l~~~~~~~~~v~v~~~~~~---g~~~~~~~~~~~- 130 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAPGTPPAYVA--------VDEARQLVYSANYHKGTAEVMKIAAD---GALTLTDTVQHS- 130 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESCCCSEEE--------EETTTTEEEEEETTTTEEEEEEECTT---SCEEEEEEEECC-
T ss_pred ceEEEEEecCCcEEEeeeeecCCCCCEEEE--------ECCCCCEEEEEeCCCCEEEEEEeCCC---CCeeecceeecC-
Confidence 34667888777777765431 11111112 245887655555444567777 4322 111111100000
Q ss_pred cccCCCCCCCccccccCCccce-EEEecCCcEEEEeC--ceEEEEeCC-CCeEE
Q 042680 176 DFLERPGNPKGRFRLENNLYPF-VYLLPDGNVYVFAN--NRSVVHDPK-ANKII 225 (530)
Q Consensus 176 d~~~~~~~~~~~~~~~~~~Yp~-~~llp~G~lfv~Gg--~~~e~yDp~-tn~w~ 225 (530)
. ..+..+. ..-.++ +...|||++|+.+. ....+||.. +++..
T Consensus 131 -~----~~p~~~~---~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 131 -G----HGPRPEQ---DGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLS 176 (347)
T ss_dssp -C----CCSSTTC---SSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEE
T ss_pred -C----CCCCccc---cCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEE
Confidence 0 0000000 111244 45568999887753 578899988 55543
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.00 E-value=0.11 Score=51.73 Aligned_cols=218 Identities=10% Similarity=0.005 Sum_probs=112.8
Q ss_pred eeEEEEeCCCCcEEEccccC-CcccccceeccCCcEEEccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEecccccccc
Q 042680 99 CHSIFYDYNKNAVKALKVQS-DTWCSSGGLSADGRLVMLSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQD 176 (530)
Q Consensus 99 a~~~~yDp~t~~w~~l~~~~-~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d 176 (530)
+...+||++++++..--... +...-+.. +.-+.+.++++||+... ...+.++ +.+. +.....+..
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~----~~~i~~~~~~lyv~~~~-~~~v~viD~~t~---~~~~~i~~~----- 83 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDV----AQSMVIRDGIGWIVVNN-SHVIFAIDINTF---KEVGRITGF----- 83 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSC----EEEEEEETTEEEEEEGG-GTEEEEEETTTC---CEEEEEECC-----
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCcc----ceEEEEECCEEEEEEcC-CCEEEEEECccc---EEEEEcCCC-----
Confidence 56789999999886532110 10000000 01113457889988753 3467888 7654 121122211
Q ss_pred ccCCCCCCCccccccCCccceEEEe-cCCcEEEEe--CceEEEEeCCCCeEEEEccCCCCC--CCccCCCceEeeccCCC
Q 042680 177 FLERPGNPKGRFRLENNLYPFVYLL-PDGNVYVFA--NNRSVVHDPKANKIIREFPQLPGG--ARSYPATGTSVLLPLYL 251 (530)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~Yp~~~ll-p~G~lfv~G--g~~~e~yDp~tn~w~~~~p~mp~~--~r~yp~~g~svmlpl~~ 251 (530)
-.|+..+. ++|+||+.. +....++|+.+++..+.++. ... ....|. +.++
T Consensus 84 -----------------~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~-g~~~~~~~~p~-~i~~------ 138 (328)
T 3dsm_A 84 -----------------TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC-PDMDMESGSTE-QMVQ------ 138 (328)
T ss_dssp -----------------SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC-TTCCTTTCBCC-CEEE------
T ss_pred -----------------CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc-CCccccCCCcc-eEEE------
Confidence 12555556 899999987 56789999999987654432 210 011332 2222
Q ss_pred CCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCC
Q 042680 252 PRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGA 330 (530)
Q Consensus 252 ~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~ 330 (530)
.++++||+.-. ....+.+||+.. .+.... +. ...-.+...-+||++|++.-.
T Consensus 139 -------~~~~lyv~~~~----------------~~~~v~viD~~t--~~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 139 -------YGKYVYVNCWS----------------YQNRILKIDTET--DKVVDELTI--GIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp -------ETTEEEEEECT----------------TCCEEEEEETTT--TEEEEEEEC--SSCBCCCEECTTSEEEEEBCC
T ss_pred -------ECCEEEEEcCC----------------CCCEEEEEECCC--CeEEEEEEc--CCCccceEEcCCCCEEEEECC
Confidence 26888887421 013467888864 433322 22 111234455589999998643
Q ss_pred CCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCC-eEEEcC
Q 042680 331 DLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDG-KVFVGG 388 (530)
Q Consensus 331 ~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdG-rVlv~G 388 (530)
......|. .....+.++|+++. +....-..+....-++. ++-||| ++|++.
T Consensus 192 ~~~~~~~~---~~~~~v~~id~~t~---~v~~~~~~~~g~~p~~l-a~~~d~~~lyv~~ 243 (328)
T 3dsm_A 192 GYEGSPYG---YEAPSLYRIDAETF---TVEKQFKFKLGDWPSEV-QLNGTRDTLYWIN 243 (328)
T ss_dssp BCTTCSSC---BCCCEEEEEETTTT---EEEEEEECCTTCCCEEE-EECTTSCEEEEES
T ss_pred CccCCccc---cCCceEEEEECCCC---eEEEEEecCCCCCceeE-EEecCCCEEEEEc
Confidence 21100000 00236789999988 65532222211212233 344554 566653
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.88 E-value=0.32 Score=48.18 Aligned_cols=137 Identities=14% Similarity=0.178 Sum_probs=73.5
Q ss_pred ecCCcEEEEeC-ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccc
Q 042680 201 LPDGNVYVFAN-NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEE 279 (530)
Q Consensus 201 lp~G~lfv~Gg-~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~ 279 (530)
.++++|+..++ ....+||..+++....+.. . ..+. .++. .. .+++++++|+.+
T Consensus 152 ~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~---h--~~~v--~~~~--~~--------~~~~~l~sg~~d--------- 205 (340)
T 1got_B 152 LDDNQIVTSSGDTTCALWDIETGQQTTTFTG---H--TGDV--MSLS--LA--------PDTRLFVSGACD--------- 205 (340)
T ss_dssp EETTEEEEEETTSCEEEEETTTTEEEEEECC---C--SSCE--EEEE--EC--------TTSSEEEEEETT---------
T ss_pred CCCCcEEEEECCCcEEEEECCCCcEEEEEcC---C--CCce--EEEE--EC--------CCCCEEEEEeCC---------
Confidence 45777555444 4688999999986644421 1 1111 1111 11 267888888765
Q ss_pred cccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCC
Q 042680 280 EKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQ 358 (530)
Q Consensus 280 ~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~ 358 (530)
..+..+|+.. .+-... .-..... .+...-|||+.+++|+.+ | ++.+||..+.
T Consensus 206 --------~~v~~wd~~~--~~~~~~~~~h~~~v-~~v~~~p~~~~l~s~s~d-~------------~v~iwd~~~~--- 258 (340)
T 1got_B 206 --------ASAKLWDVRE--GMCRQTFTGHESDI-NAICFFPNGNAFATGSDD-A------------TCRLFDLRAD--- 258 (340)
T ss_dssp --------SCEEEEETTT--CSEEEEECCCSSCE-EEEEECTTSSEEEEEETT-S------------CEEEEETTTT---
T ss_pred --------CcEEEEECCC--CeeEEEEcCCcCCE-EEEEEcCCCCEEEEEcCC-C------------cEEEEECCCC---
Confidence 1345677653 211111 1112222 233445899999999865 1 5789998876
Q ss_pred ceE-EecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 359 RFA-ELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 359 ~Wt-~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
+-. ....... ...-.....-|||+.+++|+..
T Consensus 259 ~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 259 QELMTYSHDNI-ICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp EEEEEECCTTC-CSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEccCCc-ccceEEEEECCCCCEEEEECCC
Confidence 422 1111110 0011123456899999999853
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.67 E-value=0.48 Score=47.35 Aligned_cols=141 Identities=13% Similarity=0.150 Sum_probs=77.0
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...++++.++.|+ ..+.+||..+++..+.+.. . ..+ -.++ .+.+ ..+++.+++|+.+
T Consensus 161 ~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~---h--~~~--v~~~--~~~~------~~~g~~l~sgs~D------ 219 (354)
T 2pbi_B 161 SFTNSDMQILTASGDGTCALWDVESGQLLQSFHG---H--GAD--VLCL--DLAP------SETGNTFVSGGCD------ 219 (354)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC---C--SSC--EEEE--EECC------CSSCCEEEEEETT------
T ss_pred EEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC---C--CCC--eEEE--EEEe------CCCCCEEEEEeCC------
Confidence 3446787777665 4688999999876644421 1 110 0111 1111 0256888888865
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAP 355 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~ 355 (530)
..+..+|+.. .+.... .-..... .+...-|+|+.+++|+.+ | ++.+||..+.
T Consensus 220 -----------g~v~~wd~~~--~~~~~~~~~h~~~v-~~v~~~p~~~~l~s~s~D-~------------~v~lwd~~~~ 272 (354)
T 2pbi_B 220 -----------KKAMVWDMRS--GQCVQAFETHESDV-NSVRYYPSGDAFASGSDD-A------------TCRLYDLRAD 272 (354)
T ss_dssp -----------SCEEEEETTT--CCEEEEECCCSSCE-EEEEECTTSSEEEEEETT-S------------CEEEEETTTT
T ss_pred -----------CeEEEEECCC--CcEEEEecCCCCCe-EEEEEeCCCCEEEEEeCC-C------------eEEEEECCCC
Confidence 1355677653 322222 2222222 233445899999999865 1 5789998876
Q ss_pred CCCceE-EecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 356 EGQRFA-ELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 356 ~g~~Wt-~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
+-. ...... .....+....-|||+++++|+..
T Consensus 273 ---~~~~~~~~~~-~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 273 ---REVAIYSKES-IIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp ---EEEEEECCTT-CCSCEEEEEECTTSSEEEEEETT
T ss_pred ---cEEEEEcCCC-cccceeEEEEeCCCCEEEEEECC
Confidence 422 221111 11112234456899999999853
No 27
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.58 E-value=0.5 Score=44.36 Aligned_cols=150 Identities=19% Similarity=0.181 Sum_probs=77.8
Q ss_pred ceEE-EecCCcEEEEe--CceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCC
Q 042680 196 PFVY-LLPDGNVYVFA--NNRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVRE 272 (530)
Q Consensus 196 p~~~-llp~G~lfv~G--g~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~ 272 (530)
|+.. ..++|+||+.. +....+||..+.... .... . ....|. +.++ - .++++|++....
T Consensus 110 p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~-~--~~~~p~-~i~~-~-----------~~g~l~v~~~~~-- 170 (270)
T 1rwi_B 110 PEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLPF-T--GLNDPD-GVAV-D-----------NSGNVYVTDTDN-- 170 (270)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-ECCC-C--SCCSCC-CEEE-C-----------TTCCEEEEEGGG--
T ss_pred CcceEECCCCCEEEEECCCCEEEEEECCCceeE-eecc-c--cCCCce-eEEE-e-----------CCCCEEEEECCC--
Confidence 4443 44699999975 346788887776543 2211 1 111221 2222 1 257888875322
Q ss_pred ccccccccccccccCCcEEEEEcCCCCCccee-c-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEe
Q 042680 273 GLYLGEEEKRFVNALDDCARMVVTSPNPEWKI-E-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLY 350 (530)
Q Consensus 273 ~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~-~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiY 350 (530)
..+.+||+.. ...... . .+..+ .+.++-++|++||..... ..+.+|
T Consensus 171 ---------------~~i~~~~~~~-~~~~~~~~~~~~~p---~~i~~d~~g~l~v~~~~~-------------~~v~~~ 218 (270)
T 1rwi_B 171 ---------------NRVVKLEAES-NNQVVLPFTDITAP---WGIAVDEAGTVYVTEHNT-------------NQVVKL 218 (270)
T ss_dssp ---------------TEEEEECTTT-CCEEECCCSSCCSE---EEEEECTTCCEEEEETTT-------------SCEEEE
T ss_pred ---------------CEEEEEecCC-CceEeecccCCCCc---eEEEECCCCCEEEEECCC-------------CcEEEE
Confidence 2356677653 111111 1 22222 233444789999977532 147789
Q ss_pred cCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCCCCCCccccCCCCcceEEEEcCCC
Q 042680 351 RPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDNDGYFEFAKFPTELRLEKFTPPY 414 (530)
Q Consensus 351 DP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~~~~~t~~~vE~y~Ppy 414 (530)
|+... .-........ ..-++ .++-+||++||+.... .+|.+|+.+.
T Consensus 219 ~~~~~---~~~~~~~~~~-~~p~~-i~~~~~g~l~v~~~~~-------------~~v~~~~~~~ 264 (270)
T 1rwi_B 219 LAGST---TSTVLPFTGL-NTPLA-VAVDSDRTVYVADRGN-------------DRVVKLTSLE 264 (270)
T ss_dssp CTTCS---CCEECCCCSC-SCEEE-EEECTTCCEEEEEGGG-------------TEEEEECCCG
T ss_pred cCCCC---cceeeccCCC-CCcee-EEECCCCCEEEEECCC-------------CEEEEEcCCC
Confidence 99765 3332211111 11223 3345899999986532 3577776654
No 28
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.56 E-value=0.6 Score=45.01 Aligned_cols=180 Identities=17% Similarity=0.164 Sum_probs=94.5
Q ss_pred ccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEeCc--
Q 042680 136 LSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN-- 212 (530)
Q Consensus 136 L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~-- 212 (530)
.+||+.++.|+.++ .+.+| ..++ +....+ .. +.. .. -.+...++|++++.|+.
T Consensus 74 ~~~~~~l~s~~~d~-~i~vwd~~~~---~~~~~~---~~---------~~~-------~v-~~~~~~~~~~~l~s~~~d~ 129 (312)
T 4ery_A 74 SSDSNLLVSASDDK-TLKIWDVSSG---KCLKTL---KG---------HSN-------YV-FCCNFNPQSNLIVSGSFDE 129 (312)
T ss_dssp CTTSSEEEEEETTS-EEEEEETTTC---CEEEEE---EC---------CSS-------CE-EEEEECSSSSEEEEEETTS
T ss_pred cCCCCEEEEECCCC-EEEEEECCCC---cEEEEE---cC---------CCC-------CE-EEEEEcCCCCEEEEEeCCC
Confidence 45889999988764 67777 4432 111111 00 000 00 01234578999988874
Q ss_pred eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEE
Q 042680 213 RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCAR 292 (530)
Q Consensus 213 ~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~ 292 (530)
...+||..+++..+.+..- ..+. .++.+ . .+++.+++|+.+ ..+..
T Consensus 130 ~i~iwd~~~~~~~~~~~~~-----~~~v--~~~~~--~--------~~~~~l~~~~~d-----------------~~i~~ 175 (312)
T 4ery_A 130 SVRIWDVKTGKCLKTLPAH-----SDPV--SAVHF--N--------RDGSLIVSSSYD-----------------GLCRI 175 (312)
T ss_dssp CEEEEETTTCCEEEEECCC-----SSCE--EEEEE--C--------TTSSEEEEEETT-----------------SCEEE
T ss_pred cEEEEECCCCEEEEEecCC-----CCcE--EEEEE--c--------CCCCEEEEEeCC-----------------CcEEE
Confidence 6789999988765444321 1111 11211 1 267788888754 12556
Q ss_pred EEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceE-EecCCCCCC
Q 042680 293 MVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFA-ELAPTDIPR 370 (530)
Q Consensus 293 ~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt-~la~~~~~R 370 (530)
+|... .+.... .............-|||+.+++++.+ | .+.+||..+. +-. .+.......
T Consensus 176 wd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-~------------~i~iwd~~~~---~~~~~~~~~~~~~ 237 (312)
T 4ery_A 176 WDTAS--GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-N------------TLKLWDYSKG---KCLKTYTGHKNEK 237 (312)
T ss_dssp EETTT--CCEEEEECCSSCCCEEEEEECTTSSEEEEEETT-T------------EEEEEETTTT---EEEEEECSSCCSS
T ss_pred EECCC--CceeeEEeccCCCceEEEEECCCCCEEEEEcCC-C------------eEEEEECCCC---cEEEEEEecCCce
Confidence 77653 222111 11111112223445899999988764 1 5788998776 432 222221111
Q ss_pred cccccceecCCCeEEEcCCCC
Q 042680 371 MYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 371 ~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.........++++.+++|+..
T Consensus 238 ~~~~~~~~~~~~~~l~sg~~d 258 (312)
T 4ery_A 238 YCIFANFSVTGGKWIVSGSED 258 (312)
T ss_dssp SCCCEEEECSSSCEEEECCTT
T ss_pred EEEEEEEEeCCCcEEEEECCC
Confidence 111122234689999999864
No 29
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.45 E-value=0.28 Score=47.73 Aligned_cols=179 Identities=15% Similarity=0.203 Sum_probs=92.3
Q ss_pred ccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEeCc--
Q 042680 136 LSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN-- 212 (530)
Q Consensus 136 L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~-- 212 (530)
.+||+.++.|+.+ .++.+| ..++ +....+. . |... --.+...|+|++++.|+.
T Consensus 64 ~~~~~~l~s~s~d-~~i~vwd~~~~---~~~~~~~---~---------h~~~--------v~~~~~~~~~~~l~sgs~D~ 119 (304)
T 2ynn_A 64 IARKNWIIVGSDD-FRIRVFNYNTG---EKVVDFE---A---------HPDY--------IRSIAVHPTKPYVLSGSDDL 119 (304)
T ss_dssp EGGGTEEEEEETT-SEEEEEETTTC---CEEEEEE---C---------CSSC--------EEEEEECSSSSEEEEEETTS
T ss_pred eCCCCEEEEECCC-CEEEEEECCCC---cEEEEEe---C---------CCCc--------EEEEEEcCCCCEEEEECCCC
Confidence 4588888888876 467778 5543 1111111 0 0000 012334579999988874
Q ss_pred eEEEEeCCCCe-EEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEE
Q 042680 213 RSVVHDPKANK-IIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCA 291 (530)
Q Consensus 213 ~~e~yDp~tn~-w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~ 291 (530)
.+.+||..++. -.+.+ .+. ..+.. .....| .++.++++|+.+ .++.
T Consensus 120 ~v~lWd~~~~~~~~~~~---~~h--~~~v~-~v~~~p----------~~~~~l~sgs~D-----------------~~v~ 166 (304)
T 2ynn_A 120 TVKLWNWENNWALEQTF---EGH--EHFVM-CVAFNP----------KDPSTFASGCLD-----------------RTVK 166 (304)
T ss_dssp CEEEEEGGGTTEEEEEE---CCC--CSCEE-EEEECT----------TCTTEEEEEETT-----------------SEEE
T ss_pred eEEEEECCCCcchhhhh---ccc--CCcEE-EEEECC----------CCCCEEEEEeCC-----------------CeEE
Confidence 68899998763 22122 111 11101 111211 256788888765 1355
Q ss_pred EEEcCCCCCcceecCCCCcccccee--eeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCce-EEecCCCC
Q 042680 292 RMVVTSPNPEWKIEKMPAPRTMADG--VLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRF-AELAPTDI 368 (530)
Q Consensus 292 ~~dp~~~~~~W~~~~M~~~R~~~~~--vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~W-t~la~~~~ 368 (530)
.+|........... ....+..... ...+|++.++.|+.+. ++.+||..+. +- ..+...
T Consensus 167 iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~D~-------------~i~iWd~~~~---~~~~~~~~h-- 227 (304)
T 2ynn_A 167 VWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMITASDDL-------------TIKIWDYQTK---SCVATLEGH-- 227 (304)
T ss_dssp EEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCEEEEEETTS-------------EEEEEETTTT---EEEEEEECC--
T ss_pred EEECCCCCccceec-cCCcCcEEEEEEEEcCCCCEEEEEcCCC-------------eEEEEeCCCC---ccceeeCCC--
Confidence 67765322222221 1111111111 1235888999888651 6789998876 32 222111
Q ss_pred CCcccccceecCCCeEEEcCCCC
Q 042680 369 PRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 369 ~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
...-..+..-|++++++.|+..
T Consensus 228 -~~~v~~~~~~p~~~~l~s~s~D 249 (304)
T 2ynn_A 228 -MSNVSFAVFHPTLPIIISGSED 249 (304)
T ss_dssp -SSCEEEEEECSSSSEEEEEETT
T ss_pred -CCCEEEEEECCCCCEEEEEcCC
Confidence 1111234467899999999854
No 30
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.32 E-value=0.052 Score=54.16 Aligned_cols=142 Identities=17% Similarity=0.131 Sum_probs=78.8
Q ss_pred EecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 200 LLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 200 llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
..|+|+.++.|+. .+.+||..++.+. .+..+.+. ..+. .++.+ . .+++.++.|+.+
T Consensus 69 ~sp~g~~l~s~s~D~~v~iw~~~~~~~~-~~~~~~~h--~~~v--~~v~~--s--------p~~~~l~s~s~D------- 126 (345)
T 3fm0_A 69 WSPCGNYLASASFDATTCIWKKNQDDFE-CVTTLEGH--ENEV--KSVAW--A--------PSGNLLATCSRD------- 126 (345)
T ss_dssp ECTTSSEEEEEETTSCEEEEEECCC-EE-EEEEECCC--SSCE--EEEEE--C--------TTSSEEEEEETT-------
T ss_pred ECCCCCEEEEEECCCcEEEEEccCCCeE-EEEEccCC--CCCc--eEEEE--e--------CCCCEEEEEECC-------
Confidence 4579999998874 6788998887653 22222221 1111 11111 1 267888888765
Q ss_pred cccccccccCCcEEEEEcCCCCCcceec-CC--CCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 278 EEEKRFVNALDDCARMVVTSPNPEWKIE-KM--PAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M--~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
.++..+|+.. ...+... .+ .... -.....-|+|++++.|+.+. ++.+||..+
T Consensus 127 ----------~~v~iwd~~~-~~~~~~~~~~~~h~~~-v~~~~~~p~~~~l~s~s~d~-------------~i~~w~~~~ 181 (345)
T 3fm0_A 127 ----------KSVWVWEVDE-EDEYECVSVLNSHTQD-VKHVVWHPSQELLASASYDD-------------TVKLYREEE 181 (345)
T ss_dssp ----------SCEEEEEECT-TSCEEEEEEECCCCSC-EEEEEECSSSSCEEEEETTS-------------CEEEEEEET
T ss_pred ----------CeEEEEECCC-CCCeEEEEEecCcCCC-eEEEEECCCCCEEEEEeCCC-------------cEEEEEecC
Confidence 1345666653 2223221 11 1111 22334458999999988651 578999988
Q ss_pred CCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 355 PEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 355 ~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
. +|.....+.--...-.....-|||+.++.|+.+
T Consensus 182 ~---~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 182 D---DWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp T---EEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred C---CEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 8 776443332111111123356899999999864
No 31
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.26 E-value=0.51 Score=45.69 Aligned_cols=95 Identities=16% Similarity=0.109 Sum_probs=51.4
Q ss_pred eEEEEeCCCCcEEEccccCCcccccceeccCCcEEEccCCe-EEEeccCCCCcEEEE-cCCCCCCCc-eEEecccccccc
Q 042680 100 HSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGS-FLVYGGRDAFSYEYV-PVEKESNKA-AIAFPFLFETQD 176 (530)
Q Consensus 100 ~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~-v~VvGG~~~~s~E~y-P~~~~~~~~-~~~~p~l~~t~d 176 (530)
...+||+.+++....-....... +.+ .-+||+ +|+.+ .....+..| +.++ +. ..... ..
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~~~-~~~--------~s~dg~~l~~~~-~~~~~i~~~d~~~~---~~~~~~~~---~~-- 82 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYDFV-DTA--------ITSDCSNVVVTS-DFCQTLVQIETQLE---PPKVVAIQ---EG-- 82 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCCEE-EEE--------ECSSSCEEEEEE-STTCEEEEEECSSS---SCEEEEEE---EC--
T ss_pred eEEEEeCcccceeeeEEccCCcc-eEE--------EcCCCCEEEEEe-CCCCeEEEEECCCC---ceeEEecc---cC--
Confidence 46789999888765543322111 222 245777 45444 333467777 6543 11 11111 00
Q ss_pred ccCCCCCCCccccccCCccc-e-EEEecCCcEEEEeC-c----eEEEEeCCCCeEEEEcc
Q 042680 177 FLERPGNPKGRFRLENNLYP-F-VYLLPDGNVYVFAN-N----RSVVHDPKANKIIREFP 229 (530)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~Yp-~-~~llp~G~lfv~Gg-~----~~e~yDp~tn~w~~~~p 229 (530)
..| + +...+||+.++.+. . ...+||..+++..+.++
T Consensus 83 -----------------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~ 125 (331)
T 3u4y_A 83 -----------------QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP 125 (331)
T ss_dssp -----------------SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE
T ss_pred -----------------CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE
Confidence 011 2 35568888544533 3 68999999998775443
No 32
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.15 E-value=1.1 Score=43.54 Aligned_cols=139 Identities=16% Similarity=0.169 Sum_probs=72.4
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...+||+.+++++ ....+||..+++..+.++.-..++..++ ...++-| ....+|+....
T Consensus 191 ~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~s~----------dg~~l~~~~~~------- 251 (353)
T 3vgz_A 191 ALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFF--INISLDT----------ARQRAFITDSK------- 251 (353)
T ss_dssp EEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCE--EEEEEET----------TTTEEEEEESS-------
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCccc--ceEEECC----------CCCEEEEEeCC-------
Confidence 4567887555543 4678899999987644432111112221 1112221 13456665422
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCe-EEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGE-VLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~-VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
...+.+||+.. .+.... +...+ . +...-|||+ +|+.+... ..+.+||..+
T Consensus 252 ----------~~~v~~~d~~~--~~~~~~~~~~~~--~-~~~~s~dg~~l~v~~~~~-------------~~v~~~d~~~ 303 (353)
T 3vgz_A 252 ----------AAEVLVVDTRN--GNILAKVAAPES--L-AVLFNPARNEAYVTHRQA-------------GKVSVIDAKS 303 (353)
T ss_dssp ----------SSEEEEEETTT--CCEEEEEECSSC--C-CEEEETTTTEEEEEETTT-------------TEEEEEETTT
T ss_pred ----------CCEEEEEECCC--CcEEEEEEcCCC--c-eEEECCCCCEEEEEECCC-------------CeEEEEECCC
Confidence 12466788753 333222 34433 2 344568997 77766432 1578999987
Q ss_pred CCCCceEEecCCCCCCcccccceecCCCe-EEEcCCC
Q 042680 355 PEGQRFAELAPTDIPRMYHSVANLLPDGK-VFVGGSN 390 (530)
Q Consensus 355 ~~g~~Wt~la~~~~~R~yHS~a~LLpdGr-Vlv~GG~ 390 (530)
. +....- .....-++ ..+-|||+ +||+...
T Consensus 304 ~---~~~~~~--~~~~~~~~-~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 304 Y---KVVKTF--DTPTHPNS-LALSADGKTLYVSVKQ 334 (353)
T ss_dssp T---EEEEEE--ECCSEEEE-EEECTTSCEEEEEEEC
T ss_pred C---eEEEEE--ecCCCCCe-EEEcCCCCEEEEEEcc
Confidence 7 544221 22222233 34558998 7777654
No 33
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.14 E-value=0.79 Score=43.84 Aligned_cols=203 Identities=12% Similarity=0.087 Sum_probs=105.8
Q ss_pred eEEEEeCCCCcEEEccccC--CcccccceeccCCcEEEccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEecccccccc
Q 042680 100 HSIFYDYNKNAVKALKVQS--DTWCSSGGLSADGRLVMLSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQD 176 (530)
Q Consensus 100 ~~~~yDp~t~~w~~l~~~~--~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d 176 (530)
...+||..+++......+. ...+.... ..++|+.+++|+.++ .+.+| ..+. +....+.. .
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~l~~~~~dg-~v~~~d~~~~---~~~~~~~~--~--- 182 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSAPACYALA--------ISPDSKVCFSCCSDG-NIAVWDLHNQ---TLVRQFQG--H--- 182 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSSCEEEEE--------ECTTSSEEEEEETTS-CEEEEETTTT---EEEEEECC--C---
T ss_pred cEEEEECCCCCcceeeecccCCCceEEEE--------ECCCCCEEEEEeCCC-cEEEEeCCCC---ceeeeeec--c---
Confidence 4668888877754443332 11111122 345888888888764 56777 4432 11111110 0
Q ss_pred ccCCCCCCCccccccCCccceEEEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCC
Q 042680 177 FLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRD 254 (530)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~ 254 (530)
.. . --.+...++|+.++.|+ ....+||..+++....+. .+. +.. .....
T Consensus 183 -------~~-~-------i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~-----~v~-~~~~s------- 233 (337)
T 1gxr_A 183 -------TD-G-------ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTS-----QIF-SLGYC------- 233 (337)
T ss_dssp -------SS-C-------EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSS-----CEE-EEEEC-------
T ss_pred -------cC-c-------eEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCC-----ceE-EEEEC-------
Confidence 00 0 01234457998888876 367899999987664332 111 101 11111
Q ss_pred CCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCC
Q 042680 255 TYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGS 334 (530)
Q Consensus 255 ~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~ 334 (530)
.+++.+++|+.+ ..+..||.... ...+. .-. .....+....|||+.+++++.+ |
T Consensus 234 ----~~~~~l~~~~~~-----------------~~i~~~~~~~~-~~~~~-~~~-~~~v~~~~~~~~~~~l~~~~~d-g- 287 (337)
T 1gxr_A 234 ----PTGEWLAVGMES-----------------SNVEVLHVNKP-DKYQL-HLH-ESCVLSLKFAYCGKWFVSTGKD-N- 287 (337)
T ss_dssp ----TTSSEEEEEETT-----------------SCEEEEETTSS-CEEEE-CCC-SSCEEEEEECTTSSEEEEEETT-S-
T ss_pred ----CCCCEEEEEcCC-----------------CcEEEEECCCC-CeEEE-cCC-ccceeEEEECCCCCEEEEecCC-C-
Confidence 267778887653 13566776531 11111 111 1123344556899999988864 1
Q ss_pred CCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 335 GGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 335 ~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.+.+||..+. +-..... ....-. ...+.|||+.+++|+..
T Consensus 288 -----------~i~~~~~~~~---~~~~~~~--~~~~v~-~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 288 -----------LLNAWRTPYG---ASIFQSK--ESSSVL-SCDISVDDKYIVTGSGD 327 (337)
T ss_dssp -----------EEEEEETTTC---CEEEEEE--CSSCEE-EEEECTTSCEEEEEETT
T ss_pred -----------cEEEEECCCC---eEEEEec--CCCcEE-EEEECCCCCEEEEecCC
Confidence 5789998876 4332111 111111 23456899999988853
No 34
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.06 E-value=0.6 Score=43.79 Aligned_cols=135 Identities=20% Similarity=0.256 Sum_probs=71.6
Q ss_pred EEecCCcEEEEe-CceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 199 YLLPDGNVYVFA-NNRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 199 ~llp~G~lfv~G-g~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
...++|+||+.. +....+||+.++... .++. . ....|. +.++ . .++++|++...+
T Consensus 73 ~~~~~g~l~v~~~~~~i~~~d~~~~~~~-~~~~-~--~~~~p~-~i~~----~--------~~g~l~v~~~~~------- 128 (270)
T 1rwi_B 73 AVDGAGTVYVTDFNNRVVTLAAGSNNQT-VLPF-D--GLNYPE-GLAV----D--------TQGAVYVADRGN------- 128 (270)
T ss_dssp EECTTCCEEEEETTTEEEEECTTCSCCE-ECCC-C--SCSSEE-EEEE----C--------TTCCEEEEEGGG-------
T ss_pred EECCCCCEEEEcCCCEEEEEeCCCceEe-eeec-C--CcCCCc-ceEE----C--------CCCCEEEEECCC-------
Confidence 345689999987 457888999887654 3321 1 112221 2221 1 267888875422
Q ss_pred cccccccccCCcEEEEEcCCCCCcceec---CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 278 EEEKRFVNALDDCARMVVTSPNPEWKIE---KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~~~~W~~~---~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
..+.+|+... ...... .+..+ .+.++-++|++|+..... ..+.+||+..
T Consensus 129 ----------~~i~~~~~~~--~~~~~~~~~~~~~p---~~i~~~~~g~l~v~~~~~-------------~~i~~~~~~~ 180 (270)
T 1rwi_B 129 ----------NRVVKLAAGS--KTQTVLPFTGLNDP---DGVAVDNSGNVYVTDTDN-------------NRVVKLEAES 180 (270)
T ss_dssp ----------TEEEEECTTC--CSCEECCCCSCCSC---CCEEECTTCCEEEEEGGG-------------TEEEEECTTT
T ss_pred ----------CEEEEEECCC--ceeEeeccccCCCc---eeEEEeCCCCEEEEECCC-------------CEEEEEecCC
Confidence 1245565432 222211 22222 233445789999976432 1577899887
Q ss_pred CCCCceEEecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 355 PEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 355 ~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
. .......... ..-++ .++-+||++||+...
T Consensus 181 ~---~~~~~~~~~~-~~p~~-i~~d~~g~l~v~~~~ 211 (270)
T 1rwi_B 181 N---NQVVLPFTDI-TAPWG-IAVDEAGTVYVTEHN 211 (270)
T ss_dssp C---CEEECCCSSC-CSEEE-EEECTTCCEEEEETT
T ss_pred C---ceEeecccCC-CCceE-EEECCCCCEEEEECC
Confidence 6 4333211111 11122 344578999998753
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.96 E-value=0.86 Score=45.62 Aligned_cols=221 Identities=10% Similarity=0.034 Sum_probs=106.3
Q ss_pred eEEEEeCCCCcEEEccccCCcccccceeccCCcEEEccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEecccccccccc
Q 042680 100 HSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFL 178 (530)
Q Consensus 100 ~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~ 178 (530)
...+||..+++-...-........+.+ ..+||+.++.|+.++ ++.+| ..+. +....+. .
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~--------~~~~~~~l~s~s~d~-~i~iwd~~~~---~~~~~~~---~----- 179 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLK--------FFPSGEALISSSQDM-QLKIWSVKDG---SNPRTLI---G----- 179 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEE--------ECTTSSEEEEEETTS-EEEEEETTTC---CCCEEEE---C-----
T ss_pred CEEEEeCCCcceeeecccccCccEEEE--------ECCCCCEEEEEeCCC-eEEEEeCCCC---cCceEEc---C-----
Confidence 356788776654433211111111122 345888888888764 67777 4432 1111110 0
Q ss_pred CCCCCCCccccccCCccceEEEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccC-------
Q 042680 179 ERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPL------- 249 (530)
Q Consensus 179 ~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl------- 249 (530)
+.. .. -.+...++|+.++.|+. ...+||..+++-.+.+..... . ..+.. ...+.|-
T Consensus 180 ----h~~-------~v-~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~-~~~v~-~~~~~~~~~~~~~~ 244 (420)
T 3vl1_A 180 ----HRA-------TV-TDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKEN-P-HDGVN-SIALFVGTDRQLHE 244 (420)
T ss_dssp ----CSS-------CE-EEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTB-T-TCCEE-EEEEEECCCSSCGG
T ss_pred ----CCC-------cE-EEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCC-C-CCCcc-EEEEecCCcceeee
Confidence 000 00 02334579998888764 588999999876644432110 0 00000 0000000
Q ss_pred ---CCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCe-EE
Q 042680 250 ---YLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGE-VL 325 (530)
Q Consensus 250 ---~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~-Vl 325 (530)
.+........+++.+++|+.+ ..+..+|+......... .......-.+...-|+|+ ++
T Consensus 245 ~~~~~v~~~~~s~~~~~l~~~~~d-----------------g~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l 306 (420)
T 3vl1_A 245 ISTSKKNNLEFGTYGKYVIAGHVS-----------------GVITVHNVFSKEQTIQL-PSKFTCSCNSLTVDGNNANYI 306 (420)
T ss_dssp GCCCCCCTTCSSCTTEEEEEEETT-----------------SCEEEEETTTCCEEEEE-CCTTSSCEEEEEECSSCTTEE
T ss_pred cccCcccceEEcCCCCEEEEEcCC-----------------CeEEEEECCCCceeEEc-ccccCCCceeEEEeCCCCCEE
Confidence 000000001267888887754 13567777531111111 122222233445568998 88
Q ss_pred EEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 326 IINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 326 ViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
++|+.+ | .+.+||..+..- ....+.... ...-.++..+||+.+++|+.
T Consensus 307 ~~g~~d-g------------~i~vwd~~~~~~-~~~~~~~~~---~~~v~~~~~~~~~~l~s~~~ 354 (420)
T 3vl1_A 307 YAGYEN-G------------MLAQWDLRSPEC-PVGEFLINE---GTPINNVYFAAGALFVSSGF 354 (420)
T ss_dssp EEEETT-S------------EEEEEETTCTTS-CSEEEEEST---TSCEEEEEEETTEEEEEETT
T ss_pred EEEeCC-C------------eEEEEEcCCCcC-chhhhhccC---CCCceEEEeCCCCEEEEecC
Confidence 888765 1 578999887611 012221100 11112335579999999884
No 36
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.93 E-value=0.53 Score=46.18 Aligned_cols=50 Identities=6% Similarity=-0.140 Sum_probs=28.4
Q ss_pred eeEEEEeCCCCcEEEccccCCcccccceeccCCcEEEccCCeEEEeccC-CCCcEEEE
Q 042680 99 CHSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGR-DAFSYEYV 155 (530)
Q Consensus 99 a~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~-~~~s~E~y 155 (530)
-..+.+|+.+++++.+............. .-+||++|+++.. ....+..|
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a-------~spdg~l~~~~~~~~~~~v~~~ 68 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLA-------LSAKDCLYSVDKEDDEGGIAAW 68 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEE-------ECTTCEEEEEEEETTEEEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEE-------EccCCeEEEEEecCCCceEEEE
Confidence 55778899999888765432211111111 2458887776642 12356666
No 37
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.88 E-value=0.16 Score=49.64 Aligned_cols=136 Identities=15% Similarity=0.207 Sum_probs=75.3
Q ss_pred CCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccccccc
Q 042680 203 DGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEE 280 (530)
Q Consensus 203 ~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~ 280 (530)
.|++++.+. ....++|+++++....++. +.. .. ...+.++| +|+||+++.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~-~~~--~~--~~~~~~~p-----------dG~ilvs~~------------ 55 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL-EKG--WE--CNSVAATK-----------AGEILFSYS------------ 55 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC-CTT--CC--CCEEEECT-----------TSCEEEECB------------
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC-Ccc--CC--CcCeEECC-----------CCCEEEeCC------------
Confidence 467777754 4678899989876545542 110 01 12333433 789998431
Q ss_pred ccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCce
Q 042680 281 KRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRF 360 (530)
Q Consensus 281 ~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~W 360 (530)
..+..||+ +..-.|+... +.....+++..++||+++|...... ..+..+||+-. ..|
T Consensus 56 -------~~V~~~d~-~G~~~W~~~~-~~~~~~~~~~~~~dG~~lv~~~~~~------------~~v~~vd~~Gk--~l~ 112 (276)
T 3no2_A 56 -------KGAKMITR-DGRELWNIAA-PAGCEMQTARILPDGNALVAWCGHP------------STILEVNMKGE--VLS 112 (276)
T ss_dssp -------SEEEEECT-TSCEEEEEEC-CTTCEEEEEEECTTSCEEEEEESTT------------EEEEEECTTSC--EEE
T ss_pred -------CCEEEECC-CCCEEEEEcC-CCCccccccEECCCCCEEEEecCCC------------CEEEEEeCCCC--EEE
Confidence 12567887 3355687652 1111244567789999999865310 14667888433 134
Q ss_pred EE-ecC-CCCCC-cccccceecCCCeEEEcCCC
Q 042680 361 AE-LAP-TDIPR-MYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 361 t~-la~-~~~~R-~yHS~a~LLpdGrVlv~GG~ 390 (530)
+. +.. ...+. ..+. +..++||.++++...
T Consensus 113 ~~~~~~~~~~~~~~~~~-v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 113 KTEFETGIERPHAQFRQ-INKNKKGNYLVPLFA 144 (276)
T ss_dssp EEEECCSCSSGGGSCSC-CEECTTSCEEEEETT
T ss_pred EEeccCCCCcccccccC-ceECCCCCEEEEecC
Confidence 42 211 11111 1223 345689999998763
No 38
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.79 E-value=1.3 Score=41.69 Aligned_cols=135 Identities=15% Similarity=0.063 Sum_probs=70.2
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
..-++|+||+... ....+||+ +++.. .+. ++.. ...| .++.+ . .++++|++....
T Consensus 147 ~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~-~~~~-~~~~---~~i~~--~--------~~g~l~v~~~~~------ 203 (299)
T 2z2n_A 147 TLGSDNALWFTENQNNAIGRITE-SGDIT-EFK-IPTP-ASGP---VGITK--G--------NDDALWFVEIIG------ 203 (299)
T ss_dssp EECTTSCEEEEETTTTEEEEECT-TCCEE-EEE-CSST-TCCE---EEEEE--C--------TTSSEEEEETTT------
T ss_pred EEcCCCCEEEEeCCCCEEEEEcC-CCcEE-Eee-CCCC-CCcc---eeEEE--C--------CCCCEEEEccCC------
Confidence 3446899999763 57889999 77665 331 2211 1122 12211 1 257888874321
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceecCCCCccccc-eeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMA-DGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAP 355 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~-~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~ 355 (530)
..+.+||+ + .++....++...... +...-++|+|||..... ..+.+||| +.
T Consensus 204 -----------~~i~~~~~-~--g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-------------~~i~~~d~-~g 255 (299)
T 2z2n_A 204 -----------NKIGRITT-S--GEITEFKIPTPNARPHAITAGAGIDLWFTEWGA-------------NKIGRLTS-NN 255 (299)
T ss_dssp -----------TEEEEECT-T--CCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-------------TEEEEEET-TT
T ss_pred -----------ceEEEECC-C--CcEEEEECCCCCCCceeEEECCCCCEEEeccCC-------------ceEEEECC-CC
Confidence 23556776 2 333322222111122 33444789999876322 14678999 44
Q ss_pred CCCceEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 356 EGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 356 ~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
++...........-++.++ ++|++|++..
T Consensus 256 ---~~~~~~~~~~~~~~~~i~~--~~g~l~v~~~ 284 (299)
T 2z2n_A 256 ---IIEEYPIQIKSAEPHGICF--DGETIWFAME 284 (299)
T ss_dssp ---EEEEEECSSSSCCEEEEEE--CSSCEEEEET
T ss_pred ---ceEEEeCCCCCCccceEEe--cCCCEEEEec
Confidence 5554421111112233333 8999999864
No 39
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.78 E-value=1.8 Score=43.32 Aligned_cols=143 Identities=13% Similarity=0.160 Sum_probs=73.9
Q ss_pred CCcEEEEeC--ceEEEEeCCCCeEEEEccC-CCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccc
Q 042680 203 DGNVYVFAN--NRSVVHDPKANKIIREFPQ-LPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEE 279 (530)
Q Consensus 203 ~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~-mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~ 279 (530)
++..++.|+ ..+.+||..+++....+.. .+.+. .....-+...+ .++.++++|+.+
T Consensus 169 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~-------~~~~~l~sgs~D--------- 227 (380)
T 3iz6_a 169 QETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH-----TADVLSLSINS-------LNANMFISGSCD--------- 227 (380)
T ss_dssp SSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC-----CSCEEEEEECS-------SSCCEEEEEETT---------
T ss_pred CCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC-----ccCeEEEEeec-------CCCCEEEEEECC---------
Confidence 345566665 4688999999876533321 11110 11111111111 367888888865
Q ss_pred cccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCc
Q 042680 280 EKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQR 359 (530)
Q Consensus 280 ~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~ 359 (530)
.++..+|+......-....-..... .+....|||+.++.|+.+ | ++.+||..+. +
T Consensus 228 --------~~v~~wd~~~~~~~~~~~~~h~~~v-~~v~~~p~~~~l~s~s~D-~------------~i~lwd~~~~---~ 282 (380)
T 3iz6_a 228 --------TTVRLWDLRITSRAVRTYHGHEGDI-NSVKFFPDGQRFGTGSDD-G------------TCRLFDMRTG---H 282 (380)
T ss_dssp --------SCEEEEETTTTCCCCEEECCCSSCC-CEEEECTTSSEEEEECSS-S------------CEEEEETTTT---E
T ss_pred --------CeEEEEECCCCCcceEEECCcCCCe-EEEEEecCCCeEEEEcCC-C------------eEEEEECCCC---c
Confidence 1355677653111111111122222 233456999999999875 1 5789998876 3
Q ss_pred eE-EecCCCCCC----cccccceecCCCeEEEcCCCC
Q 042680 360 FA-ELAPTDIPR----MYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 360 Wt-~la~~~~~R----~yHS~a~LLpdGrVlv~GG~~ 391 (530)
-. .+....... ..-.....-|||+.+++|+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECC
Confidence 22 221111100 011233456899999999853
No 40
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.77 E-value=0.61 Score=46.95 Aligned_cols=147 Identities=12% Similarity=0.133 Sum_probs=77.4
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...++|++++.|+ ....+||+.+++....+.....+.+. ...+.. .+++++++|.....
T Consensus 183 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~~~-----------~~~~~l~~g~~~~~---- 243 (402)
T 2aq5_A 183 DWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRP----VHAVFV-----------SEGKILTTGFSRMS---- 243 (402)
T ss_dssp EECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSC----CEEEEC-----------STTEEEEEEECTTC----
T ss_pred EECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcc----eEEEEc-----------CCCcEEEEeccCCC----
Confidence 3457999888886 46889999999876544111111111 122222 26888888732100
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPE 356 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~ 356 (530)
...+..+|.......-....+...........-|||+.+++.|...| .+.+||..+.
T Consensus 244 ----------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg------------~i~i~d~~~~- 300 (402)
T 2aq5_A 244 ----------ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS------------SIRYFEITSE- 300 (402)
T ss_dssp ----------CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS------------CEEEEEECSS-
T ss_pred ----------CceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC------------eEEEEEecCC-
Confidence 12356677753111111112333222334445589987765442211 5788998876
Q ss_pred CCc--eEEecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 357 GQR--FAELAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 357 g~~--Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
+ ...+...... .........|||++++.++.
T Consensus 301 --~~~~~~l~~~~~~-~~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 301 --APFLHYLSMFSSK-ESQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp --TTCEEEEEEECCS-SCCSEEEECCGGGSCGGGTE
T ss_pred --CcceEeecccccC-CcccceEEecccccceecce
Confidence 4 3333332211 11223455689998887654
No 41
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.75 E-value=1.3 Score=44.68 Aligned_cols=148 Identities=14% Similarity=0.107 Sum_probs=70.4
Q ss_pred EEecCCcEEEEeC----------ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecC
Q 042680 199 YLLPDGNVYVFAN----------NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGG 268 (530)
Q Consensus 199 ~llp~G~lfv~Gg----------~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG 268 (530)
...++|+.+++++ ....+||+.+++....+. .+ ..+ ...+.-| ....+|++++
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~----~~~--~~~~~~~----------~g~~l~~~~~ 322 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PP----GNK--RHIVSGN----------TENKIYVSDM 322 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EE----ECE--EEEEECS----------STTEEEEEET
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CC----CCc--ceEEECC----------CCCEEEEEec
Confidence 3457887666655 256799999987663331 11 111 1112211 1336777765
Q ss_pred ccCCccccccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCC--CcccCCCCCcc
Q 042680 269 SVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSG--GWHCADKPSLK 346 (530)
Q Consensus 269 ~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~--g~~~~~~p~~~ 346 (530)
.+ ..+.+||+.. .+-.. .++....-.+...-|||+.+++++...+.. .+-.....-..
T Consensus 323 ~~-----------------~~v~v~d~~~--~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~ 382 (433)
T 3bws_A 323 CC-----------------SKIEVYDLKE--KKVQK-SIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK 382 (433)
T ss_dssp TT-----------------TEEEEEETTT--TEEEE-EEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE
T ss_pred CC-----------------CEEEEEECCC--CcEEE-EecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE
Confidence 43 2356677653 22111 122222223445568998666665431100 00000000125
Q ss_pred cEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 347 PMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 347 ~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
+.+||..+. +....-.. ...-. ...+-|||+.+++++
T Consensus 383 v~~~d~~~~---~~~~~~~~--~~~~~-~~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 383 VYVIDTTTD---TVKEFWEA--GNQPT-GLDVSPDNRYLVISD 419 (433)
T ss_dssp EEEEETTTT---EEEEEEEC--SSSEE-EEEECTTSCEEEEEE
T ss_pred EEEEECCCC---cEEEEecC--CCCCc-eEEEcCCCCEEEEEE
Confidence 789999877 54322111 11112 234568998877665
No 42
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.69 E-value=1.8 Score=43.59 Aligned_cols=143 Identities=11% Similarity=0.115 Sum_probs=76.7
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...++|++++.|+ ..+.+||..+.+-...+..- ..+.. .....| ....++++||...+
T Consensus 224 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-----~~~v~-~~~~~p----------~~~~ll~~~~gs~d---- 283 (401)
T 4aez_A 224 AWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNH-----NAAVK-AVAWCP----------WQSNLLATGGGTMD---- 283 (401)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTCSSEEEEECCC-----SSCCC-EEEECT----------TSTTEEEEECCTTT----
T ss_pred EEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCC-----cceEE-EEEECC----------CCCCEEEEecCCCC----
Confidence 3456999999987 46889999987655344221 11111 122222 24567777752111
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEE--cCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLII--NGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlVi--GG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
..+..+|... .+-.. .+.....-.+...-|+|+.+++ |..+ | .+.+||..+
T Consensus 284 -----------~~i~i~d~~~--~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~g~~d-g------------~i~v~~~~~ 336 (401)
T 4aez_A 284 -----------KQIHFWNAAT--GARVN-TVDAGSQVTSLIWSPHSKEIMSTHGFPD-N------------NLSIWSYSS 336 (401)
T ss_dssp -----------CEEEEEETTT--CCEEE-EEECSSCEEEEEECSSSSEEEEEECTTT-C------------EEEEEEEET
T ss_pred -----------CEEEEEECCC--CCEEE-EEeCCCcEEEEEECCCCCeEEEEeecCC-C------------cEEEEecCC
Confidence 2356677653 22111 1111222333445589988887 3332 1 578999887
Q ss_pred CCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 355 PEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 355 ~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
. +......+......-....+-|||+.+++|+..
T Consensus 337 ~---~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d 370 (401)
T 4aez_A 337 S---GLTKQVDIPAHDTRVLYSALSPDGRILSTAASD 370 (401)
T ss_dssp T---EEEEEEEEECCSSCCCEEEECTTSSEEEEECTT
T ss_pred c---cceeEEEecCCCCCEEEEEECCCCCEEEEEeCC
Confidence 6 555433222111111223456899999998853
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.55 E-value=0.37 Score=47.22 Aligned_cols=109 Identities=17% Similarity=0.141 Sum_probs=60.5
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...++|++++.|+. ...+||..++++...+. +... ..+. .++. .. .+++.+++|+.+
T Consensus 59 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~--~~~v--~~~~--~~--------~~~~~l~~~~~d------ 117 (372)
T 1k8k_C 59 DWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLV-ILRI--NRAA--RCVR--WA--------PNEKKFAVGSGS------ 117 (372)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEETTEEEEEEE-CCCC--SSCE--EEEE--EC--------TTSSEEEEEETT------
T ss_pred EEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEE-eecC--CCce--eEEE--EC--------CCCCEEEEEeCC------
Confidence 44579999988874 68899999998763322 1111 1111 1111 11 257778887754
Q ss_pred ccccccccccCCcEEEEEcCCCCCccee-c--CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKI-E--KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPN 353 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~-~--~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~ 353 (530)
..+..+|... ...|.. . .......-.+....|||+.+++|+.+ | .+.+||..
T Consensus 118 -----------~~v~i~d~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g------------~i~~~d~~ 172 (372)
T 1k8k_C 118 -----------RVISICYFEQ-ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-F------------KCRIFSAY 172 (372)
T ss_dssp -----------SSEEEEEEET-TTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT-S------------CEEEEECC
T ss_pred -----------CEEEEEEecC-CCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC-C------------CEEEEEcc
Confidence 1245566654 223332 2 12222223344556899999998864 1 46788854
No 44
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.47 E-value=2.2 Score=42.12 Aligned_cols=203 Identities=15% Similarity=0.124 Sum_probs=100.3
Q ss_pred eEEEEeCCCCcEEEccccCCcccccceeccCCcEEEccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEecccccccccc
Q 042680 100 HSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFL 178 (530)
Q Consensus 100 ~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~ 178 (530)
...+||..+++....-.... ...+.+ .-+||+.++++|.....+.+| ..++ +...... .
T Consensus 55 ~i~v~d~~~~~~~~~~~~~~-~v~~~~--------~spdg~~l~~~~~~~~~v~v~d~~~~---~~~~~~~---~----- 114 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAGS-SPQGVA--------VSPDGKQVYVTNMASSTLSVIDTTSN---TVAGTVK---T----- 114 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-SEEEEE--------ECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEE---C-----
T ss_pred eEEEEECCCCeEEEEEECCC-CccceE--------ECCCCCEEEEEECCCCEEEEEECCCC---eEEEEEe---C-----
Confidence 36678888776544322222 111122 245787665566555678888 5543 1111111 0
Q ss_pred CCCCCCCccccccCCccce-EEEecCCc-EEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCC
Q 042680 179 ERPGNPKGRFRLENNLYPF-VYLLPDGN-VYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRD 254 (530)
Q Consensus 179 ~~~~~~~~~~~~~~~~Yp~-~~llp~G~-lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~ 254 (530)
.-.+. +...++|+ ||+.+. ....+||..+++....+.. . ..+ ....+.|
T Consensus 115 --------------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~----~~~--~~~~~~~------ 167 (391)
T 1l0q_A 115 --------------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV-G----RSP--KGIAVTP------ 167 (391)
T ss_dssp --------------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-C----SSE--EEEEECT------
T ss_pred --------------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec-C----CCc--ceEEECC------
Confidence 00122 34457887 556665 4789999999987744432 1 111 1112221
Q ss_pred CCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCC
Q 042680 255 TYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGS 334 (530)
Q Consensus 255 ~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~ 334 (530)
....|+++++.+ ..+..+|+.. .+.... ......-.....-|||+.+++++...+
T Consensus 168 ----dg~~l~~~~~~~-----------------~~v~~~d~~~--~~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~- 222 (391)
T 1l0q_A 168 ----DGTKVYVANFDS-----------------MSISVIDTVT--NSVIDT-VKVEAAPSGIAVNPEGTKAYVTNVDKY- 222 (391)
T ss_dssp ----TSSEEEEEETTT-----------------TEEEEEETTT--TEEEEE-EECSSEEEEEEECTTSSEEEEEEECSS-
T ss_pred ----CCCEEEEEeCCC-----------------CEEEEEECCC--CeEEEE-EecCCCccceEECCCCCEEEEEecCcC-
Confidence 134566665532 2356677753 222221 111111223345589987776653100
Q ss_pred CCcccCCCCCcccEEecCCCCCCCceE-EecCCCCCCcccccceecCCCe-EEEcCCC
Q 042680 335 GGWHCADKPSLKPMLYRPNAPEGQRFA-ELAPTDIPRMYHSVANLLPDGK-VFVGGSN 390 (530)
Q Consensus 335 ~g~~~~~~p~~~~eiYDP~t~~g~~Wt-~la~~~~~R~yHS~a~LLpdGr-Vlv~GG~ 390 (530)
...+.+||..+. +-. .+... .. .....+-|||+ +|++++.
T Consensus 223 ---------~~~v~~~d~~~~---~~~~~~~~~---~~-~~~~~~s~dg~~l~~s~~~ 264 (391)
T 1l0q_A 223 ---------FNTVSMIDTGTN---KITARIPVG---PD-PAGIAVTPDGKKVYVALSF 264 (391)
T ss_dssp ---------CCEEEEEETTTT---EEEEEEECC---SS-EEEEEECTTSSEEEEEETT
T ss_pred ---------CCcEEEEECCCC---eEEEEEecC---CC-ccEEEEccCCCEEEEEcCC
Confidence 126789999876 432 22221 11 12234568996 5567653
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.42 E-value=0.77 Score=44.75 Aligned_cols=101 Identities=14% Similarity=0.156 Sum_probs=55.1
Q ss_pred CcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCC-ccccceeeeecC---CeEEEEcCCCCCC
Q 042680 260 DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPA-PRTMADGVLLPN---GEVLIINGADLGS 334 (530)
Q Consensus 260 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~-~R~~~~~vvLpd---G~VlViGG~~~g~ 334 (530)
+++.+++|+.+ ..+..||.......|... .+.. ...-.+...-|| |+++++++.+ |
T Consensus 171 ~~~~l~~~~~d-----------------g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-g- 231 (379)
T 3jrp_A 171 ESRKFVTGGAD-----------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-R- 231 (379)
T ss_dssp TTCEEEEEETT-----------------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT-S-
T ss_pred CCCEEEEEeCC-----------------CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC-C-
Confidence 47788887754 135667776434445443 3322 112223445588 8999999865 1
Q ss_pred CCcccCCCCCcccEEecCCCCCCCceE-EecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 335 GGWHCADKPSLKPMLYRPNAPEGQRFA-ELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 335 ~g~~~~~~p~~~~eiYDP~t~~g~~Wt-~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.+.+||..+... .+. .+.........-.....-|||+.+++|+..
T Consensus 232 -----------~i~iwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 232 -----------TCIIWTQDNEQG-PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp -----------CEEEEEESSTTS-CCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS
T ss_pred -----------EEEEEeCCCCCc-cceeeeeccccCCCcEEEEEEcCCCCEEEEecCC
Confidence 578899877621 111 111111111111223456899999988763
No 46
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.40 E-value=1.8 Score=40.71 Aligned_cols=139 Identities=17% Similarity=0.134 Sum_probs=71.8
Q ss_pred ceEEE-ecCCcEEEEe--CceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCC
Q 042680 196 PFVYL-LPDGNVYVFA--NNRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVRE 272 (530)
Q Consensus 196 p~~~l-lp~G~lfv~G--g~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~ 272 (530)
|+... -++|+||+.. +....+||+ +++.. .+. ++.. ...| ..+.+ . .+++||++....
T Consensus 148 ~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~-~~~~-~~~~---~~i~~--d--------~~g~l~v~~~~~-- 208 (300)
T 2qc5_A 148 PAFITLGSDNALWFTENQNNSIGRITN-TGKLE-EYP-LPTN-AAAP---VGITS--G--------NDGALWFVEIMG-- 208 (300)
T ss_dssp EEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEE-CSST-TCCE---EEEEE--C--------TTSSEEEEETTT--
T ss_pred ceeEEECCCCCEEEEecCCCeEEEECC-CCcEE-Eee-CCCC-CCCc---ceEEE--C--------CCCCEEEEccCC--
Confidence 54444 4789999886 457889999 66665 332 2211 1222 12211 1 267888864221
Q ss_pred ccccccccccccccCCcEEEEEcCCCCCcceecCCCCccc-cceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEec
Q 042680 273 GLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRT-MADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYR 351 (530)
Q Consensus 273 ~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~-~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYD 351 (530)
..+.+||+. .++....++..-. -.+..+-++|+|||..... ..+.+||
T Consensus 209 ---------------~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~-------------~~i~~~~ 257 (300)
T 2qc5_A 209 ---------------NKIGRITTT---GEISEYDIPTPNARPHAITAGKNSEIWFTEWGA-------------NQIGRIT 257 (300)
T ss_dssp ---------------TEEEEECTT---CCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-------------TEEEEEC
T ss_pred ---------------CEEEEEcCC---CcEEEEECCCCCCCceEEEECCCCCEEEeccCC-------------CeEEEEC
Confidence 135567762 3333322221111 1233444789999976322 1467899
Q ss_pred CCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 352 PNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 352 P~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
| +. ++....-......-++. ++.+||++|++..
T Consensus 258 ~-~g---~~~~~~~~~~~~~~~~i-~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 258 N-DN---TIQEYQLQTENAEPHGI-TFGKDGSVWFALK 290 (300)
T ss_dssp T-TS---CEEEEECCSTTCCCCCE-EECTTSCEEEECS
T ss_pred C-CC---cEEEEECCccCCcccee-EeCCCCCEEEEcc
Confidence 8 44 55543211111112333 3457999999865
No 47
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.38 E-value=1.9 Score=40.83 Aligned_cols=138 Identities=17% Similarity=0.246 Sum_probs=72.9
Q ss_pred ceE-EEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCC
Q 042680 196 PFV-YLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVRE 272 (530)
Q Consensus 196 p~~-~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~ 272 (530)
|.. ...++|+||+... ....+||+...... .+.. +. ....| .++.+ . .+++||++...+
T Consensus 123 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-~~-~~~~p---~~i~~--~--------~~g~l~v~~~~~-- 184 (286)
T 1q7f_A 123 PRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-KFGC-SK-HLEFP---NGVVV--N--------DKQEIFISDNRA-- 184 (286)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTSCEEE-EEEC-TT-TCSSE---EEEEE--C--------SSSEEEEEEGGG--
T ss_pred ceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEE-EeCC-CC-ccCCc---EEEEE--C--------CCCCEEEEECCC--
Confidence 444 3447999999853 57889998765543 3421 11 11222 12211 1 268899875432
Q ss_pred ccccccccccccccCCcEEEEEcCCCCCcceec-C----CCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCccc
Q 042680 273 GLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-K----MPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKP 347 (530)
Q Consensus 273 ~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~----M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~ 347 (530)
..+.+||+. .+.... . +..++ +.++-+||++||...... ..+
T Consensus 185 ---------------~~i~~~~~~---g~~~~~~~~~g~~~~p~---~i~~d~~G~l~v~~~~~~------------~~i 231 (286)
T 1q7f_A 185 ---------------HCVKVFNYE---GQYLRQIGGEGITNYPI---GVGINSNGEILIADNHNN------------FNL 231 (286)
T ss_dssp ---------------TEEEEEETT---CCEEEEESCTTTSCSEE---EEEECTTCCEEEEECSSS------------CEE
T ss_pred ---------------CEEEEEcCC---CCEEEEEccCCccCCCc---EEEECCCCCEEEEeCCCC------------EEE
Confidence 235677764 222111 1 22222 333448999999875431 157
Q ss_pred EEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcC
Q 042680 348 MLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGG 388 (530)
Q Consensus 348 eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~G 388 (530)
.+||+... ....+..-.....-++. .+-+||++||+.
T Consensus 232 ~~~~~~g~---~~~~~~~~~~~~~~~~i-~~~~~g~l~vs~ 268 (286)
T 1q7f_A 232 TIFTQDGQ---LISALESKVKHAQCFDV-ALMDDGSVVLAS 268 (286)
T ss_dssp EEECTTSC---EEEEEEESSCCSCEEEE-EEETTTEEEEEE
T ss_pred EEECCCCC---EEEEEcccCCCCcceeE-EECCCCcEEEEC
Confidence 89998654 43333221111112233 345899999984
No 48
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.16 E-value=0.7 Score=43.95 Aligned_cols=145 Identities=8% Similarity=0.131 Sum_probs=74.8
Q ss_pred cceEEE-ecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCC--CCCccCCCceEeec-cCCCCCCCCCCCCcEEEEecC
Q 042680 195 YPFVYL-LPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPG--GARSYPATGTSVLL-PLYLPRDTYKPVDAEVLICGG 268 (530)
Q Consensus 195 Yp~~~l-lp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~--~~r~yp~~g~svml-pl~~~~~~~~~~~gkI~v~GG 268 (530)
+|...+ -++|+||+... ....+||+...... .++.... .....| ..+.+ + .++++|+++.
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~-~~~~~~~~~~~~~~p---~~i~~~~----------~~g~l~v~~~ 96 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKF-QFGECGKRDSQLLYP---NRVAVVR----------NSGDIIVTER 96 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEE-EECCBSSSTTCBSSE---EEEEEET----------TTTEEEEEEC
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCCCcEEE-EecccCCCcccccCc---eEEEEEc----------CCCeEEEEcC
Confidence 355444 46899999853 56889999855433 4432110 011122 12211 1 2689999864
Q ss_pred ccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCccc
Q 042680 269 SVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKP 347 (530)
Q Consensus 269 ~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~ 347 (530)
.. ...+.+||+. .+.... .......-.+.++-++|++||..... ..+
T Consensus 97 ~~----------------~~~i~~~d~~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-------------~~i 144 (286)
T 1q7f_A 97 SP----------------THQIQIYNQY---GQFVRKFGATILQHPRGVTVDNKGRIIVVECKV-------------MRV 144 (286)
T ss_dssp GG----------------GCEEEEECTT---SCEEEEECTTTCSCEEEEEECTTSCEEEEETTT-------------TEE
T ss_pred CC----------------CCEEEEECCC---CcEEEEecCccCCCceEEEEeCCCCEEEEECCC-------------CEE
Confidence 21 0134566643 222211 11111112244556899999986532 157
Q ss_pred EEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 348 MLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 348 eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
.+||+... ....+........-++ .++-+||++||+..
T Consensus 145 ~~~~~~g~---~~~~~~~~~~~~~p~~-i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 145 IIFDQNGN---VLHKFGCSKHLEFPNG-VVVNDKQEIFISDN 182 (286)
T ss_dssp EEECTTSC---EEEEEECTTTCSSEEE-EEECSSSEEEEEEG
T ss_pred EEEcCCCC---EEEEeCCCCccCCcEE-EEECCCCCEEEEEC
Confidence 78998655 5444432111111122 34567999999865
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.07 E-value=1.2 Score=42.62 Aligned_cols=139 Identities=15% Similarity=0.095 Sum_probs=74.5
Q ss_pred EEEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccc
Q 042680 198 VYLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLY 275 (530)
Q Consensus 198 ~~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 275 (530)
+...++|+.+++|+ ....+||..+++.. ....+... ..+.. ..... .+++.+++|+.+
T Consensus 103 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~--~~~i~-~~~~~-----------~~~~~l~~~~~d----- 162 (337)
T 1gxr_A 103 CKLLPDGCTLIVGGEASTLSIWDLAAPTPR-IKAELTSS--APACY-ALAIS-----------PDSKVCFSCCSD----- 162 (337)
T ss_dssp EEECTTSSEEEEEESSSEEEEEECCCC--E-EEEEEECS--SSCEE-EEEEC-----------TTSSEEEEEETT-----
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCCcc-eeeecccC--CCceE-EEEEC-----------CCCCEEEEEeCC-----
Confidence 34557999888876 46889999988743 11111111 11101 11111 257777787754
Q ss_pred cccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 276 LGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 276 ~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
..+..+|+.. .+.... ...... -.+....|||+.+++++.+ | .+.+||..+
T Consensus 163 ------------g~v~~~d~~~--~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~d-g------------~i~~~d~~~ 214 (337)
T 1gxr_A 163 ------------GNIAVWDLHN--QTLVRQFQGHTDG-ASCIDISNDGTKLWTGGLD-N------------TVRSWDLRE 214 (337)
T ss_dssp ------------SCEEEEETTT--TEEEEEECCCSSC-EEEEEECTTSSEEEEEETT-S------------EEEEEETTT
T ss_pred ------------CcEEEEeCCC--CceeeeeecccCc-eEEEEECCCCCEEEEEecC-C------------cEEEEECCC
Confidence 1255677653 222222 222222 2334456899999988754 1 578999987
Q ss_pred CCCCceEEecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 355 PEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 355 ~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
. +-...-. ....-.+ ..+-|||+.+++|+.
T Consensus 215 ~---~~~~~~~--~~~~v~~-~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 215 G---RQLQQHD--FTSQIFS-LGYCPTGEWLAVGME 244 (337)
T ss_dssp T---EEEEEEE--CSSCEEE-EEECTTSSEEEEEET
T ss_pred C---ceEeeec--CCCceEE-EEECCCCCEEEEEcC
Confidence 6 4322111 1111122 334589999999875
No 50
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.06 E-value=1.2 Score=45.34 Aligned_cols=30 Identities=17% Similarity=0.382 Sum_probs=22.6
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREF 228 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~ 228 (530)
...|+|+.++.|+ ....+||..+++..+.+
T Consensus 199 ~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 199 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 4457999888887 46889999998765444
No 51
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.01 E-value=2.2 Score=45.70 Aligned_cols=212 Identities=11% Similarity=0.092 Sum_probs=104.6
Q ss_pred eEEEEeCCCCcEEEccccCCcccccceeccCCcEEEccCCeEEEeccCCCCcEEEE-c--CCCCCCCceEEecccccccc
Q 042680 100 HSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDAFSYEYV-P--VEKESNKAAIAFPFLFETQD 176 (530)
Q Consensus 100 ~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~~s~E~y-P--~~~~~~~~~~~~p~l~~t~d 176 (530)
...++|..+++....-..... .++.+ .-+||+.+.+++.+ .++..| . .+. +....++
T Consensus 160 ~V~v~D~~t~~~~~~i~~g~~-~~~v~--------~spdg~~l~v~~~d-~~V~v~D~~~~t~---~~~~~i~------- 219 (543)
T 1nir_A 160 QIALVDGDSKKIVKVIDTGYA-VHISR--------MSASGRYLLVIGRD-ARIDMIDLWAKEP---TKVAEIK------- 219 (543)
T ss_dssp EEEEEETTTCCEEEEEECSTT-EEEEE--------ECTTSCEEEEEETT-SEEEEEETTSSSC---EEEEEEE-------
T ss_pred eEEEEECCCceEEEEEecCcc-cceEE--------ECCCCCEEEEECCC-CeEEEEECcCCCC---cEEEEEe-------
Confidence 366788888765432111111 12222 35688877777766 678888 6 332 1111111
Q ss_pred ccCCCCCCCccccccCCccce-EEEec----CCcEEEEeC---ceEEEEeCCCCeEEEEccCCC--CCCCcc-C--CCce
Q 042680 177 FLERPGNPKGRFRLENNLYPF-VYLLP----DGNVYVFAN---NRSVVHDPKANKIIREFPQLP--GGARSY-P--ATGT 243 (530)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~Yp~-~~llp----~G~lfv~Gg---~~~e~yDp~tn~w~~~~p~mp--~~~r~y-p--~~g~ 243 (530)
....|+ +...| ||+.+++++ ..+.+||..+.+..+.++... .....| | +..+
T Consensus 220 ---------------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~ 284 (543)
T 1nir_A 220 ---------------IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAA 284 (543)
T ss_dssp ---------------CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEE
T ss_pred ---------------cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEE
Confidence 011243 34557 898776665 578899999988775554211 000011 1 1111
Q ss_pred EeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCe
Q 042680 244 SVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGE 323 (530)
Q Consensus 244 svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~ 323 (530)
.+. .+ ...++|++...+ ..+..+|..+..... ...++..+.-++...-|||+
T Consensus 285 i~~---s~-------~~~~~~vs~~~~-----------------g~i~vvd~~~~~~l~-~~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 285 IIA---SH-------EHPEFIVNVKET-----------------GKVLLVNYKDIDNLT-VTSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp EEE---CS-------SSSEEEEEETTT-----------------TEEEEEECTTSSSCE-EEEEECCSSCCCEEECTTSC
T ss_pred EEE---CC-------CCCEEEEEECCC-----------------CeEEEEEecCCCcce-eEEeccCcCccCceECCCCC
Confidence 221 11 245666654321 235566665321111 11222344445556669999
Q ss_pred EEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEE-ecCCCCCCcccccceecCC-CeEEEcCC
Q 042680 324 VLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAE-LAPTDIPRMYHSVANLLPD-GKVFVGGS 389 (530)
Q Consensus 324 VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~-la~~~~~R~yHS~a~LLpd-GrVlv~GG 389 (530)
.+++.... ..++.++|.++. +-.. +..-..|+...+....-|| |++|+++.
T Consensus 337 ~l~va~~~------------~~~v~v~D~~tg---~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 337 YFMTAANN------------SNKVAVIDSKDR---RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH 389 (543)
T ss_dssp EEEEEEGG------------GTEEEEEETTTT---EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEB
T ss_pred EEEEEecC------------CCeEEEEECCCC---eEEEeeccCCCCCCCCCcccCCCCCccEEEecc
Confidence 55444322 115778999987 5442 2222222222233334466 88998874
No 52
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.99 E-value=2.3 Score=46.72 Aligned_cols=140 Identities=13% Similarity=0.128 Sum_probs=75.7
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCC-eEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKAN-KIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLY 275 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn-~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 275 (530)
...++|+.++.|+. ...+||..++ ...+.+..- ..+.. .....| .+++.+++|+.+
T Consensus 104 ~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-----~~~v~-~~~~~p----------~~~~~l~~~~~d----- 162 (814)
T 3mkq_A 104 AVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGH-----EHFVM-CVAFNP----------KDPSTFASGCLD----- 162 (814)
T ss_dssp EECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECC-----SSCEE-EEEEET----------TEEEEEEEEETT-----
T ss_pred EEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCC-----CCcEE-EEEEEc----------CCCCEEEEEeCC-----
Confidence 34578988887763 6889999887 443222211 11111 111111 157788887754
Q ss_pred cccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeec--CCeEEEEcCCCCCCCCcccCCCCCcccEEecCC
Q 042680 276 LGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLP--NGEVLIINGADLGSGGWHCADKPSLKPMLYRPN 353 (530)
Q Consensus 276 ~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLp--dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~ 353 (530)
..+..+|+......+.... ...+........| ||+.+++|+.+ | .+.+||..
T Consensus 163 ------------g~v~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d-g------------~i~~~d~~ 216 (814)
T 3mkq_A 163 ------------RTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASDD-L------------TIKIWDYQ 216 (814)
T ss_dssp ------------SEEEEEETTCSSCSEEEEC-CCTTCCCEEEECCSTTCCEEEEECTT-S------------EEEEEETT
T ss_pred ------------CeEEEEECCCCcceeEEec-CCCCCEEEEEEEECCCCCEEEEEeCC-C------------EEEEEECC
Confidence 1356677754333333321 1112222333345 99999999865 1 57899987
Q ss_pred CCCCCceE-EecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 354 APEGQRFA-ELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 354 t~~g~~Wt-~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
+. +-. .+... ...-.....-|||+++++|+..
T Consensus 217 ~~---~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d 249 (814)
T 3mkq_A 217 TK---SCVATLEGH---MSNVSFAVFHPTLPIIISGSED 249 (814)
T ss_dssp TT---EEEEEEECC---SSCEEEEEECSSSSEEEEEETT
T ss_pred CC---cEEEEEcCC---CCCEEEEEEcCCCCEEEEEeCC
Confidence 76 422 22111 1112234456899999998854
No 53
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.98 E-value=2.7 Score=40.37 Aligned_cols=82 Identities=10% Similarity=0.098 Sum_probs=41.2
Q ss_pred cEEEEEcCCCCCcc---eecCCCCccccceeeeecCCe-EEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEec
Q 042680 289 DCARMVVTSPNPEW---KIEKMPAPRTMADGVLLPNGE-VLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELA 364 (530)
Q Consensus 289 s~~~~dp~~~~~~W---~~~~M~~~R~~~~~vvLpdG~-VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la 364 (530)
.+.+||+.. .+. .. .++....-.++..-|||+ +|+.+... ..+.+||+++. +.+.+.
T Consensus 199 ~v~v~d~~~--~~~~~~~~-~~~~~~~~~~~~~spdg~~l~v~~~~~-------------~~i~~~d~~~~---~~~~~~ 259 (331)
T 3u4y_A 199 SIGILETQN--PENITLLN-AVGTNNLPGTIVVSRDGSTVYVLTEST-------------VDVFNFNQLSG---TLSFVK 259 (331)
T ss_dssp EEEEEECSS--TTSCEEEE-EEECSSCCCCEEECTTSSEEEEECSSE-------------EEEEEEETTTT---EEEEEE
T ss_pred eEEEEECCC--Ccccceee-eccCCCCCceEEECCCCCEEEEEEcCC-------------CEEEEEECCCC---ceeeec
Confidence 356788753 332 11 222222233455669999 55654422 14778999887 664332
Q ss_pred CCC-----CCCcccc--cceecCCCeEE-EcCC
Q 042680 365 PTD-----IPRMYHS--VANLLPDGKVF-VGGS 389 (530)
Q Consensus 365 ~~~-----~~R~yHS--~a~LLpdGrVl-v~GG 389 (530)
... .++..+. ...+-|||+.+ +++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 260 SFGHGLLIDPRPLFGANQMALNKTETKLFISAN 292 (331)
T ss_dssp EEECCCCCCCGGGTTCCCEEECTTSSEEEEEET
T ss_pred ccccccccCCCCcccccceEECCCCCEEEEecC
Confidence 111 1222111 12556899855 5544
No 54
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.97 E-value=1.8 Score=43.64 Aligned_cols=68 Identities=18% Similarity=0.269 Sum_probs=40.2
Q ss_pred ccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEec-CCcEEEEeC--
Q 042680 136 LSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLP-DGNVYVFAN-- 211 (530)
Q Consensus 136 L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp-~G~lfv~Gg-- 211 (530)
.+||+.++.|+.+ .++.+| ..++ +....... . .. -..+...+ +|++++.|+
T Consensus 174 ~p~~~~l~s~s~d-~~v~iwd~~~~---~~~~~~~~--~------------------~~-v~~~~~~~~~~~~l~~~s~d 228 (393)
T 1erj_A 174 FPSGDKLVSGSGD-RTVRIWDLRTG---QCSLTLSI--E------------------DG-VTTVAVSPGDGKYIAAGSLD 228 (393)
T ss_dssp CTTSSEEEEEETT-SEEEEEETTTT---EEEEEEEC--S------------------SC-EEEEEECSTTCCEEEEEETT
T ss_pred cCCCCEEEEecCC-CcEEEEECCCC---eeEEEEEc--C------------------CC-cEEEEEECCCCCEEEEEcCC
Confidence 4588888888876 467777 5432 11111110 0 00 01223445 899999887
Q ss_pred ceEEEEeCCCCeEEEEc
Q 042680 212 NRSVVHDPKANKIIREF 228 (530)
Q Consensus 212 ~~~e~yDp~tn~w~~~~ 228 (530)
..+.+||..+++....+
T Consensus 229 ~~v~iwd~~~~~~~~~~ 245 (393)
T 1erj_A 229 RAVRVWDSETGFLVERL 245 (393)
T ss_dssp SCEEEEETTTCCEEEEE
T ss_pred CcEEEEECCCCcEEEee
Confidence 46889999998765444
No 55
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.94 E-value=2.5 Score=39.72 Aligned_cols=139 Identities=17% Similarity=0.150 Sum_probs=70.3
Q ss_pred ceE-EEecCCcEEEEe--CceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCC
Q 042680 196 PFV-YLLPDGNVYVFA--NNRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVRE 272 (530)
Q Consensus 196 p~~-~llp~G~lfv~G--g~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~ 272 (530)
|+. ...++|+||+.. +....+||+ +++.. .+. ++.. ...| ..+.+ . .++++|++.-..
T Consensus 101 ~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~-~~~~-~~~~---~~i~~--~--------~~g~l~v~~~~~-- 161 (299)
T 2z2n_A 101 PYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYE-LPNK-GSYP---SFITL--G--------SDNALWFTENQN-- 161 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEE-CSST-TCCE---EEEEE--C--------TTSCEEEEETTT--
T ss_pred ceeeEECCCCCEEEEecCCceEEEECC-CCCEE-Eec-CCCC-CCCC---ceEEE--c--------CCCCEEEEeCCC--
Confidence 443 344689999986 457889999 66554 222 1211 1121 11111 1 267888864211
Q ss_pred ccccccccccccccCCcEEEEEcCCCCCcceecCCCCc-cccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEec
Q 042680 273 GLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAP-RTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYR 351 (530)
Q Consensus 273 ~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~-R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYD 351 (530)
..+.+||+ + .+.....++.. ..-.+...-++|++|+..... ..+.+||
T Consensus 162 ---------------~~i~~~~~-~--g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-------------~~i~~~~ 210 (299)
T 2z2n_A 162 ---------------NAIGRITE-S--GDITEFKIPTPASGPVGITKGNDDALWFVEIIG-------------NKIGRIT 210 (299)
T ss_dssp ---------------TEEEEECT-T--CCEEEEECSSTTCCEEEEEECTTSSEEEEETTT-------------TEEEEEC
T ss_pred ---------------CEEEEEcC-C--CcEEEeeCCCCCCcceeEEECCCCCEEEEccCC-------------ceEEEEC
Confidence 23456666 2 33332112111 111233444789999876432 1467899
Q ss_pred CCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 352 PNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 352 P~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
+ +. ++...........-++ ..+-+||++|++..
T Consensus 211 ~-~g---~~~~~~~~~~~~~~~~-i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 211 T-SG---EITEFKIPTPNARPHA-ITAGAGIDLWFTEW 243 (299)
T ss_dssp T-TC---CEEEEECSSTTCCEEE-EEECSTTCEEEEET
T ss_pred C-CC---cEEEEECCCCCCCcee-EEECCCCCEEEecc
Confidence 9 66 6654321111111122 33457999999863
No 56
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.89 E-value=0.49 Score=52.83 Aligned_cols=102 Identities=14% Similarity=0.124 Sum_probs=55.2
Q ss_pred CcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCC-CccccceeeeecC---CeEEEEcCCCCCC
Q 042680 260 DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMP-APRTMADGVLLPN---GEVLIINGADLGS 334 (530)
Q Consensus 260 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~-~~R~~~~~vvLpd---G~VlViGG~~~g~ 334 (530)
+++.+++|+.+ ..+..+|.......+... .+. ....-.+...-|+ |+++++||.+ |
T Consensus 169 d~~~l~sgs~d-----------------g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D-g- 229 (753)
T 3jro_A 169 ESRKFVTGGAD-----------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-R- 229 (753)
T ss_dssp GGCCEEEEETT-----------------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS-S-
T ss_pred CCCEEEEEECC-----------------CeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC-C-
Confidence 46778887754 135667776434444443 222 1222233344588 8999999865 1
Q ss_pred CCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 335 GGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 335 ~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.+.+||..+..+..-..+.........-.....-|||+.+++||..
T Consensus 230 -----------~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D 275 (753)
T 3jro_A 230 -----------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 275 (753)
T ss_dssp -----------CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS
T ss_pred -----------EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC
Confidence 5789998876221111111111111111123456899999998864
No 57
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.83 E-value=2.9 Score=40.00 Aligned_cols=179 Identities=9% Similarity=0.094 Sum_probs=91.1
Q ss_pred ccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEeCc--
Q 042680 136 LSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN-- 212 (530)
Q Consensus 136 L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~-- 212 (530)
.++|+.++.|+.++ .+.+| ..+. +....++. . .. .. -.+...++|++++.|+.
T Consensus 116 ~~~~~~l~s~~~d~-~i~iwd~~~~---~~~~~~~~--~----------~~-------~v-~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 116 NPQSNLIVSGSFDE-SVRIWDVKTG---KCLKTLPA--H----------SD-------PV-SAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp CSSSSEEEEEETTS-CEEEEETTTC---CEEEEECC--C----------SS-------CE-EEEEECTTSSEEEEEETTS
T ss_pred cCCCCEEEEEeCCC-cEEEEECCCC---EEEEEecC--C----------CC-------cE-EEEEEcCCCCEEEEEeCCC
Confidence 45888889988764 57777 5442 11111110 0 00 00 01234579999998874
Q ss_pred eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEE
Q 042680 213 RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCAR 292 (530)
Q Consensus 213 ~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~ 292 (530)
...+||..+++..+.+..- ...+. ..+ ... .+++.+++|+.+ ..+..
T Consensus 172 ~i~~wd~~~~~~~~~~~~~----~~~~~--~~~--~~~--------~~~~~l~~~~~d-----------------~~i~i 218 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDD----DNPPV--SFV--KFS--------PNGKYILAATLD-----------------NTLKL 218 (312)
T ss_dssp CEEEEETTTCCEEEEECCS----SCCCE--EEE--EEC--------TTSSEEEEEETT-----------------TEEEE
T ss_pred cEEEEECCCCceeeEEecc----CCCce--EEE--EEC--------CCCCEEEEEcCC-----------------CeEEE
Confidence 5789999988765433211 11111 111 111 267778887754 12455
Q ss_pred EEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceE-EecCCCCCC
Q 042680 293 MVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFA-ELAPTDIPR 370 (530)
Q Consensus 293 ~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt-~la~~~~~R 370 (530)
||........... ..............++|+.++.|+.+ | .+.+||..+. +-. .+... ...
T Consensus 219 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-g------------~i~vwd~~~~---~~~~~~~~h-~~~ 281 (312)
T 4ery_A 219 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-N------------LVYIWNLQTK---EIVQKLQGH-TDV 281 (312)
T ss_dssp EETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-S------------CEEEEETTTC---CEEEEECCC-SSC
T ss_pred EECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-C------------EEEEEECCCc---hhhhhhhcc-CCc
Confidence 6664311111111 11111112222334688999988865 1 5789998776 432 22111 111
Q ss_pred cccccceecCCCeEEEcCCC
Q 042680 371 MYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 371 ~yHS~a~LLpdGrVlv~GG~ 390 (530)
. .....-|++++++.++.
T Consensus 282 v--~~~~~~p~~~~l~s~~~ 299 (312)
T 4ery_A 282 V--ISTACHPTENIIASAAL 299 (312)
T ss_dssp E--EEEEECSSSSEEEEEEC
T ss_pred E--EEEeecCcCCceEEEEc
Confidence 1 12234689998888763
No 58
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.77 E-value=1.9 Score=42.35 Aligned_cols=71 Identities=14% Similarity=0.098 Sum_probs=47.1
Q ss_pred ccCCeEEEeccCCC-CcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEe--C
Q 042680 136 LSDGSFLVYGGRDA-FSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFA--N 211 (530)
Q Consensus 136 L~dG~v~VvGG~~~-~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~G--g 211 (530)
..||++|+..|..+ .++..+ ++++ +-....++ +...|.......+++||+.- .
T Consensus 50 ~~~~~LyestG~~g~S~v~~vD~~Tg---kv~~~~~l--------------------~~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 50 YRNGYFYESTGLNGRSSIRKVDIESG---KTLQQIEL--------------------GKRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTTC---CEEEEEEC--------------------CTTCCEEEEEEETTEEEEEESSS
T ss_pred EECCEEEEECCCCCCceEEEEECCCC---cEEEEEec--------------------CCccceeEEEEeCCEEEEEEeeC
Confidence 34899999999765 457777 7765 22222221 01223344556688999997 4
Q ss_pred ceEEEEeCCCCeEEEEcc
Q 042680 212 NRSVVHDPKANKIIREFP 229 (530)
Q Consensus 212 ~~~e~yDp~tn~w~~~~p 229 (530)
+.+.+||+++.+..+.++
T Consensus 107 ~~v~v~D~~t~~~~~ti~ 124 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFN 124 (262)
T ss_dssp SEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECccCcEEEEEE
Confidence 678999999998876665
No 59
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.74 E-value=3 Score=42.36 Aligned_cols=138 Identities=16% Similarity=0.113 Sum_probs=74.2
Q ss_pred EecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 200 LLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 200 llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
+..+|+.++.|+ ....+||..+++....+..- .. ....+- .+++.+++|+.+
T Consensus 285 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~----~v~~~~-----------~~~~~l~~~~~d------- 338 (445)
T 2ovr_B 285 LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH----QS----LTSGME-----------LKDNILVSGNAD------- 338 (445)
T ss_dssp EEECSSEEEEEETTSCEEEEETTTCCEEEEECCC----CS----CEEEEE-----------EETTEEEEEETT-------
T ss_pred EEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCC----cc----cEEEEE-----------EeCCEEEEEeCC-------
Confidence 334888888876 46889999998766444211 11 111111 246677887754
Q ss_pred cccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCC
Q 042680 278 EEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEG 357 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g 357 (530)
..+..+|+.......+...-.........+. .+++.+++|+.+ | .+.+||..+.
T Consensus 339 ----------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~l~s~~~d-g------------~v~iwd~~~~-- 392 (445)
T 2ovr_B 339 ----------STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQ-FNKNFVITSSDD-G------------TVKLWDLKTG-- 392 (445)
T ss_dssp ----------SCEEEEETTTCCEEEEECSTTSCSSCEEEEE-ECSSEEEEEETT-S------------EEEEEETTTC--
T ss_pred ----------CeEEEEECCCCcEEEEEccCCCCCCCEEEEE-ECCCEEEEEeCC-C------------eEEEEECCCC--
Confidence 1355677653111111111111112223344 388999998865 1 5789998877
Q ss_pred CceE-EecCCCCCCcccc----cceecCCCeEEEcCCCCC
Q 042680 358 QRFA-ELAPTDIPRMYHS----VANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 358 ~~Wt-~la~~~~~R~yHS----~a~LLpdGrVlv~GG~~~ 392 (530)
+.. .+..... ..|. ....-|||+++++|+...
T Consensus 393 -~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 393 -EFIRNLVTLES--GGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp -CEEEEEEECTT--GGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred -ceeeeeecccc--CCCCceEEEEEecCCEEEEEEcccCC
Confidence 543 2211110 1111 123458999999998643
No 60
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.73 E-value=0.83 Score=44.22 Aligned_cols=94 Identities=13% Similarity=0.167 Sum_probs=53.6
Q ss_pred CcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcc
Q 042680 260 DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWH 338 (530)
Q Consensus 260 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~ 338 (530)
+++.+++|+.+ ..+..||+... .+-... ...... ..+...-|||+.+++++.+ |
T Consensus 186 ~~~~l~~~~~d-----------------g~i~i~d~~~~-~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d-~----- 240 (369)
T 3zwl_B 186 KGKYIIAGHKD-----------------GKISKYDVSNN-YEYVDSIDLHEKS-ISDMQFSPDLTYFITSSRD-T----- 240 (369)
T ss_dssp GGCEEEEEETT-----------------SEEEEEETTTT-TEEEEEEECCSSC-EEEEEECTTSSEEEEEETT-S-----
T ss_pred CCCEEEEEcCC-----------------CEEEEEECCCC-cEeEEEEecCCCc-eeEEEECCCCCEEEEecCC-c-----
Confidence 57778887653 13567777531 111111 222222 2334556899999998754 1
Q ss_pred cCCCCCcccEEecCCCCCCCceE-EecCCCCCCcccccceecCCCeEEEcCCCCC
Q 042680 339 CADKPSLKPMLYRPNAPEGQRFA-ELAPTDIPRMYHSVANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 339 ~~~~p~~~~eiYDP~t~~g~~Wt-~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~ 392 (530)
.+.+||..+. +.. .+. . ........+.|+|+.+++|+...
T Consensus 241 -------~i~v~d~~~~---~~~~~~~---~-~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 241 -------NSFLVDVSTL---QVLKKYE---T-DCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp -------EEEEEETTTC---CEEEEEE---C-SSCEEEEEECSSSSEEEEEECCC
T ss_pred -------eEEEEECCCC---ceeeeec---C-CCCceeEEecCCCceEEEeecCC
Confidence 5789998876 432 222 1 11122345678999999988654
No 61
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.64 E-value=3.5 Score=39.96 Aligned_cols=181 Identities=14% Similarity=0.103 Sum_probs=98.2
Q ss_pred ccCCeEEEeccCCC-CcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEe--C
Q 042680 136 LSDGSFLVYGGRDA-FSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFA--N 211 (530)
Q Consensus 136 L~dG~v~VvGG~~~-~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~G--g 211 (530)
+.++++|+..|..+ .++..+ +.++ +-....++ +...+.......+++||+.. .
T Consensus 28 ~~~~~LyestG~~g~S~v~~vD~~tg---kv~~~~~l--------------------~~~~fgeGi~~~~~~ly~ltw~~ 84 (243)
T 3mbr_X 28 YLRGHLYESTGETGRSSVRKVDLETG---RILQRAEV--------------------PPPYFGAGIVAWRDRLIQLTWRN 84 (243)
T ss_dssp EETTEEEEEECCTTSCEEEEEETTTC---CEEEEEEC--------------------CTTCCEEEEEEETTEEEEEESSS
T ss_pred EECCEEEEECCCCCCceEEEEECCCC---CEEEEEeC--------------------CCCcceeEEEEeCCEEEEEEeeC
Confidence 34789999999864 467777 7764 22222221 12234455566789999997 4
Q ss_pred ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEE
Q 042680 212 NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCA 291 (530)
Q Consensus 212 ~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~ 291 (530)
+.+.+||+++.+..+.++- ++ .|-+.. + ...++|+.=|. +.+.
T Consensus 85 ~~v~v~D~~tl~~~~ti~~-~~-------~Gwglt-~----------dg~~L~vSdgs------------------~~l~ 127 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRY-PG-------EGWALT-S----------DDSHLYMSDGT------------------AVIR 127 (243)
T ss_dssp SEEEEEETTTTEEEEEEEC-SS-------CCCEEE-E----------CSSCEEEECSS------------------SEEE
T ss_pred CEEEEEECCcCcEEEEEeC-CC-------CceEEe-e----------CCCEEEEECCC------------------CeEE
Confidence 6789999999988766653 21 132321 1 25677776542 2355
Q ss_pred EEEcCCCC--CcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCC-
Q 042680 292 RMVVTSPN--PEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDI- 368 (530)
Q Consensus 292 ~~dp~~~~--~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~- 368 (530)
.+||..-. .+++....+.+-...+-....+|+||+-.-.+ ..+.+-||++..-..|-.++.+.-
T Consensus 128 ~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s-------------~~I~vIDp~tG~V~~~idl~~l~~~ 194 (243)
T 3mbr_X 128 KLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLT-------------SRIARIDPASGKVVAWIDLQALVPD 194 (243)
T ss_dssp EECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTT-------------TEEEEECTTTCBEEEEEECGGGSTT
T ss_pred EEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCC-------------CeEEEEECCCCCEEEEEECCcCccc
Confidence 67765310 11121122223223333334599999644221 267789999983333444443321
Q ss_pred ------CC--cccccceecCCCeEEEcCC
Q 042680 369 ------PR--MYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 369 ------~R--~yHS~a~LLpdGrVlv~GG 389 (530)
+. .--+.|.-=..+|+||+|-
T Consensus 195 ~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 195 ADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 11 1123333212578888885
No 62
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.39 E-value=1.9 Score=42.31 Aligned_cols=180 Identities=12% Similarity=0.029 Sum_probs=96.6
Q ss_pred cCCeEEEeccC-CCCcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEe--Cc
Q 042680 137 SDGSFLVYGGR-DAFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFA--NN 212 (530)
Q Consensus 137 ~dG~v~VvGG~-~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~G--g~ 212 (530)
+||++|+..|. ...++..+ +.++ +-....+. +...++..+.+.+++||+.. .+
T Consensus 30 ~dg~Lyvstg~~~~s~v~~iD~~tg---~v~~~i~l--------------------~~~~fgeGi~~~g~~lyv~t~~~~ 86 (266)
T 2iwa_A 30 ENDTLFESTGLYGRSSVRQVALQTG---KVENIHKM--------------------DDSYFGEGLTLLNEKLYQVVWLKN 86 (266)
T ss_dssp STTEEEEEECSTTTCEEEEEETTTC---CEEEEEEC--------------------CTTCCEEEEEEETTEEEEEETTCS
T ss_pred CCCeEEEECCCCCCCEEEEEECCCC---CEEEEEec--------------------CCCcceEEEEEeCCEEEEEEecCC
Confidence 46899998875 34567777 7765 22222221 01233445556678999987 46
Q ss_pred eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEE
Q 042680 213 RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCAR 292 (530)
Q Consensus 213 ~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~ 292 (530)
.+.+||+.+.+..+.++. + .+ . |.++ -+ ...++|++-|. +.+..
T Consensus 87 ~v~viD~~t~~v~~~i~~-g-~~--~---g~gl-t~----------Dg~~l~vs~gs------------------~~l~v 130 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTH-Q-MK--D---GWGL-AT----------DGKILYGSDGT------------------SILYE 130 (266)
T ss_dssp EEEEEETTTTEEEEEEEC-C-SS--S---CCEE-EE----------CSSSEEEECSS------------------SEEEE
T ss_pred EEEEEECCCCcEEEEEEC-C-CC--C---eEEE-EE----------CCCEEEEECCC------------------CeEEE
Confidence 789999999988766642 1 01 1 2222 11 25678877542 23566
Q ss_pred EEcCCCCCcce----ecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCC-
Q 042680 293 MVVTSPNPEWK----IEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTD- 367 (530)
Q Consensus 293 ~dp~~~~~~W~----~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~- 367 (530)
+||.. .+-. ....+.+-.....+...||++|+....+ .++.+-||++..-..|-.++.+.
T Consensus 131 iD~~t--~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~-------------~~V~vID~~tg~V~~~I~~~g~~~ 195 (266)
T 2iwa_A 131 IDPHT--FKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQT-------------DCIARISAKDGTLLGWILLPNLRK 195 (266)
T ss_dssp ECTTT--CCEEEEEECEETTEECCCEEEEEEETTEEEEEETTS-------------SEEEEEETTTCCEEEEEECHHHHH
T ss_pred EECCC--CcEEEEEEECCCCcccccceeEEEECCEEEEecCCC-------------CeEEEEECCCCcEEEEEECCCccc
Confidence 77653 2111 1111122112333334499999876432 16788999988322233332110
Q ss_pred ------CC--CcccccceecCCC-eEEEcCCCC
Q 042680 368 ------IP--RMYHSVANLLPDG-KVFVGGSND 391 (530)
Q Consensus 368 ------~~--R~yHS~a~LLpdG-rVlv~GG~~ 391 (530)
.+ -.-+++|. .+|| ++||+|.+-
T Consensus 196 ~~~~~~~~~~~v~nGIa~-~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 196 KLIDEGFRDIDVLNGIAW-DQENKRIFVTGKLW 227 (266)
T ss_dssp HHHHTTCTTCCCEEEEEE-ETTTTEEEEEETTC
T ss_pred ccccccccccCceEEEEE-cCCCCEEEEECCCC
Confidence 00 01134444 4665 799999853
No 63
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.27 E-value=1.4 Score=43.37 Aligned_cols=70 Identities=20% Similarity=0.369 Sum_probs=40.4
Q ss_pred eeeeec-CCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCC------CC--cccccceecCC-CeE
Q 042680 315 DGVLLP-NGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDI------PR--MYHSVANLLPD-GKV 384 (530)
Q Consensus 315 ~~vvLp-dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~------~R--~yHS~a~LLpd-GrV 384 (530)
+.++-| +|+|||..+.. ...+.+||+... ....+..... .+ .-++.+ +-+| |++
T Consensus 147 ~ia~~~~~g~lyv~d~~~------------~~~I~~~~~~g~---~~~~~~~~g~~~~~~~~~~~~p~gia-~d~~~g~l 210 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYC------------NSRIVQFSPSGK---FVTQWGEESSGSSPRPGQFSVPHSLA-LVPHLDQL 210 (329)
T ss_dssp EEEECTTTCCEEEEECSS------------CCEEEEECTTSC---EEEEECEECCSSSCCTTEESCEEEEE-EETTTTEE
T ss_pred EEEEeCCCCeEEEEeCCC------------CCeEEEEcCCCC---EEEEeccCCCCCCCCCcccCCCcEEE-EECCCCEE
Confidence 334456 89999998621 115788996544 3333321110 11 123443 4477 999
Q ss_pred EEcCCCCCCCCccccCCCCcceEEEEcCC
Q 042680 385 FVGGSNDNDGYFEFAKFPTELRLEKFTPP 413 (530)
Q Consensus 385 lv~GG~~~~~~~~~~~~~t~~~vE~y~Pp 413 (530)
||+.... .+|.+|++.
T Consensus 211 ~v~d~~~-------------~~I~~~~~~ 226 (329)
T 3fvz_A 211 CVADREN-------------GRIQCFKTD 226 (329)
T ss_dssp EEEETTT-------------TEEEEEETT
T ss_pred EEEECCC-------------CEEEEEECC
Confidence 9997642 367888876
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.00 E-value=1.3 Score=44.20 Aligned_cols=27 Identities=11% Similarity=0.180 Sum_probs=20.4
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEE
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKII 225 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~ 225 (530)
...++|++++.|+ ....+||..+.+-.
T Consensus 146 ~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 174 (420)
T 3vl1_A 146 KFFPSGEALISSSQDMQLKIWSVKDGSNP 174 (420)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCCC
T ss_pred EECCCCCEEEEEeCCCeEEEEeCCCCcCc
Confidence 3457999888887 46889999887644
No 65
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=93.98 E-value=4.1 Score=42.56 Aligned_cols=135 Identities=13% Similarity=0.145 Sum_probs=71.8
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...||++.++.++ ....+||....... .+..- ..+... ... . .+++++++|+.+
T Consensus 433 ~~s~d~~~l~~~~~d~~v~~w~~~~~~~~-~~~~~-----~~~v~~-~~~---s--------pd~~~las~~~d------ 488 (577)
T 2ymu_A 433 AFSPDDQTIASASDDKTVKLWNRNGQLLQ-TLTGH-----SSSVRG-VAF---S--------PDGQTIASASDD------ 488 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTSCEEE-EEECC-----SSCEEE-EEE---C--------TTSCEEEEEETT------
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCEEE-EEcCC-----CCCEEE-EEE---c--------CCCCEEEEEeCC------
Confidence 3457999988876 46788997655433 33221 111111 111 2 268888888754
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAP 355 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~ 355 (530)
..+..+|.. .+-... .-...+.. +....|||+.++.++.+ | .+.+||....
T Consensus 489 -----------~~i~iw~~~---~~~~~~~~~h~~~v~-~l~~s~dg~~l~s~~~d-g------------~v~lwd~~~~ 540 (577)
T 2ymu_A 489 -----------KTVKLWNRN---GQLLQTLTGHSSSVR-GVAFSPDGQTIASASDD-K------------TVKLWNRNGQ 540 (577)
T ss_dssp -----------SEEEEEETT---SCEEEEEECCSSCEE-EEEECTTSSCEEEEETT-S------------EEEEECTTSC
T ss_pred -----------CEEEEEcCC---CCEEEEEeCCCCCEE-EEEEcCCCCEEEEEECc-C------------EEEEEeCCCC
Confidence 123445532 221111 11222222 23345999999998865 1 5789995433
Q ss_pred CCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 356 EGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 356 ~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
....+..-. .+ -......|||+.++.||.+
T Consensus 541 ---~~~~~~~h~-~~--v~~~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 541 ---LLQTLTGHS-SS--VWGVAFSPDGQTIASASSD 570 (577)
T ss_dssp ---EEEEEECCS-SC--EEEEEECTTSSCEEEEETT
T ss_pred ---EEEEEcCCC-CC--EEEEEEcCCCCEEEEEeCC
Confidence 444432110 00 1123456999999988853
No 66
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.83 E-value=5.1 Score=39.39 Aligned_cols=70 Identities=9% Similarity=0.060 Sum_probs=46.8
Q ss_pred ccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEe--Cc
Q 042680 136 LSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFA--NN 212 (530)
Q Consensus 136 L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~G--g~ 212 (530)
..++++|+..|.++. +..+ ++++. -.... +. ...|.......+++||+.. ++
T Consensus 62 ~~~~~Ly~stG~~g~-v~~iD~~Tgk---v~~~~--l~-------------------~~~FgeGit~~g~~Ly~ltw~~~ 116 (268)
T 3nok_A 62 FHQGHFFESTGHQGT-LRQLSLESAQ---PVWME--RL-------------------GNIFAEGLASDGERLYQLTWTEG 116 (268)
T ss_dssp EETTEEEEEETTTTE-EEECCSSCSS---CSEEE--EC-------------------TTCCEEEEEECSSCEEEEESSSC
T ss_pred EECCEEEEEcCCCCE-EEEEECCCCc---EEeEE--CC-------------------CCcceeEEEEeCCEEEEEEccCC
Confidence 447899999998765 7777 77652 11111 11 1223344566688999997 46
Q ss_pred eEEEEeCCCCeEEEEccC
Q 042680 213 RSVVHDPKANKIIREFPQ 230 (530)
Q Consensus 213 ~~e~yDp~tn~w~~~~p~ 230 (530)
.+..||+++.+..+.++-
T Consensus 117 ~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCcCcEEEEEeC
Confidence 789999999998876653
No 67
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=93.81 E-value=4.4 Score=37.98 Aligned_cols=139 Identities=14% Similarity=0.143 Sum_probs=70.1
Q ss_pred ceEE-EecCCcEEEEe--CceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCC
Q 042680 196 PFVY-LLPDGNVYVFA--NNRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVRE 272 (530)
Q Consensus 196 p~~~-llp~G~lfv~G--g~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~ 272 (530)
|+.. ..++|+||+.. +....+||+. ++.. .+. ++. ....| ..+.+ . .++++|++....
T Consensus 106 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~-~~~-~~~~~---~~i~~--d--------~~g~l~v~~~~~-- 166 (300)
T 2qc5_A 106 PYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYD-LPN-KGSYP---AFITL--G--------SDNALWFTENQN-- 166 (300)
T ss_dssp EEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEE-CSS-TTCCE---EEEEE--C--------TTSSEEEEETTT--
T ss_pred CccceECCCCCEEEEccCCCeEEEECCC-CCEE-Ecc-CCC-CCCCc---eeEEE--C--------CCCCEEEEecCC--
Confidence 4443 34689999986 4578889998 6554 232 221 11122 11211 1 257788764211
Q ss_pred ccccccccccccccCCcEEEEEcCCCCCcceecCCCCccccc-eeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEec
Q 042680 273 GLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMA-DGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYR 351 (530)
Q Consensus 273 ~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~-~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYD 351 (530)
..+.+||+. .++....++..-... +..+-++|+||+..... ..+.+||
T Consensus 167 ---------------~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~-------------~~i~~~~ 215 (300)
T 2qc5_A 167 ---------------NSIGRITNT---GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMG-------------NKIGRIT 215 (300)
T ss_dssp ---------------TEEEEECTT---CCEEEEECSSTTCCEEEEEECTTSSEEEEETTT-------------TEEEEEC
T ss_pred ---------------CeEEEECCC---CcEEEeeCCCCCCCcceEEECCCCCEEEEccCC-------------CEEEEEc
Confidence 134566662 333322222111112 33344789999976422 1467899
Q ss_pred CCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 352 PNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 352 P~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
+ +. ++...........-++ .++-++|++|++..
T Consensus 216 ~-~g---~~~~~~~~~~~~~~~~-i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 216 T-TG---EISEYDIPTPNARPHA-ITAGKNSEIWFTEW 248 (300)
T ss_dssp T-TC---CEEEEECSSTTCCEEE-EEECSTTCEEEEET
T ss_pred C-CC---cEEEEECCCCCCCceE-EEECCCCCEEEecc
Confidence 8 44 5554321111111122 33457899999874
No 68
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.80 E-value=1.7 Score=43.59 Aligned_cols=141 Identities=13% Similarity=0.120 Sum_probs=74.3
Q ss_pred EEecCCcEEEEeC-ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 199 YLLPDGNVYVFAN-NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 199 ~llp~G~lfv~Gg-~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
...|||++++.+. ....+|+..+++...... ..+ ..... ......| +++.++.++.+.+.
T Consensus 183 ~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~-~~~--~~~~v-~~v~fsp-----------dg~~l~~~s~d~~~---- 243 (365)
T 4h5i_A 183 HFSTDGKVVAYITGSSLEVISTVTGSCIARKT-DFD--KNWSL-SKINFIA-----------DDTVLIAASLKKGK---- 243 (365)
T ss_dssp EECTTSSEEEEECSSCEEEEETTTCCEEEEEC-CCC--TTEEE-EEEEEEE-----------TTEEEEEEEESSSC----
T ss_pred EEccCCceEEeccceeEEEEEeccCcceeeee-cCC--CCCCE-EEEEEcC-----------CCCEEEEEecCCcc----
Confidence 3468999998876 467888888876542221 111 11111 1112222 67888887754221
Q ss_pred cccccccccCCcEEEEEcCCCCCcceec---CCC-CccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCC
Q 042680 278 EEEKRFVNALDDCARMVVTSPNPEWKIE---KMP-APRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPN 353 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~~~~W~~~---~M~-~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~ 353 (530)
...+..++... ..+... .+. ....--+...-|||+++++|+.+. ++.+||-.
T Consensus 244 ---------~~~i~~~~~~~--~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-------------~V~iwd~~ 299 (365)
T 4h5i_A 244 ---------GIVLTKISIKS--GNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN-------------SIALVKLK 299 (365)
T ss_dssp ---------CEEEEEEEEET--TEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS-------------CEEEEETT
T ss_pred ---------eeEEeeccccc--ceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC-------------EEEEEECC
Confidence 01123344332 222111 111 111111233459999999998751 57899987
Q ss_pred CCCCCceE-EecCCCCCCcccc----cceecCCCeEEEcCCCC
Q 042680 354 APEGQRFA-ELAPTDIPRMYHS----VANLLPDGKVFVGGSND 391 (530)
Q Consensus 354 t~~g~~Wt-~la~~~~~R~yHS----~a~LLpdGrVlv~GG~~ 391 (530)
+. +-. .+- ..|. ....-|||+.++.|+.+
T Consensus 300 ~~---~~~~~~~------~gH~~~V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 300 DL---SMSKIFK------QAHSFAITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp TT---EEEEEET------TSSSSCEEEEEECTTSCEEEEEETT
T ss_pred CC---cEEEEec------CcccCCEEEEEECCCCCEEEEEeCC
Confidence 76 422 211 1233 23356999999999864
No 69
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.77 E-value=6.9 Score=40.12 Aligned_cols=27 Identities=11% Similarity=0.095 Sum_probs=19.7
Q ss_pred EEec-CCcEEEEeC-ceEEEEeCCCCeEE
Q 042680 199 YLLP-DGNVYVFAN-NRSVVHDPKANKII 225 (530)
Q Consensus 199 ~llp-~G~lfv~Gg-~~~e~yDp~tn~w~ 225 (530)
.+-+ +|+||+.-. ....+||+.++...
T Consensus 225 av~p~~g~lyv~d~~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 225 ALDETEEWLYFVDSNKNFGRFNVKTQEVT 253 (409)
T ss_dssp EECTTSSEEEEECTTCEEEEEETTTCCEE
T ss_pred EEeCCCCeEEEEECCCcEEEEECCCCCEE
Confidence 4556 899999644 35789999987654
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.69 E-value=1.2 Score=43.23 Aligned_cols=57 Identities=14% Similarity=0.170 Sum_probs=34.4
Q ss_pred CCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCC---CeEEEcCCCC
Q 042680 321 NGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPD---GKVFVGGSND 391 (530)
Q Consensus 321 dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpd---GrVlv~GG~~ 391 (530)
|++.+++|+.+ | .+.+||..+.. ..|.....+......-.....-|| ++++++|+..
T Consensus 171 ~~~~l~~~~~d-g------------~i~i~d~~~~~-~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 171 ESRKFVTGGAD-N------------LVKIWKYNSDA-QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp TTCEEEEEETT-S------------CEEEEEEETTT-TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred CCCEEEEEeCC-C------------eEEEEEecCCC-cceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 79999998865 1 57889986651 134443333222222223445688 8999998854
No 71
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.51 E-value=5.1 Score=39.45 Aligned_cols=134 Identities=13% Similarity=0.124 Sum_probs=69.6
Q ss_pred EEecCCc-EEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccc
Q 042680 199 YLLPDGN-VYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLY 275 (530)
Q Consensus 199 ~llp~G~-lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 275 (530)
...++|+ ||+.+. ....+||..+++....+.. . ..+ ....+.| ....+|++++.+
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~----~~~--~~~~~s~----------dg~~l~~~~~~~----- 137 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-G----KSP--LGLALSP----------DGKKLYVTNNGD----- 137 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-S----SSE--EEEEECT----------TSSEEEEEETTT-----
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-C----CCc--ceEEECC----------CCCEEEEEeCCC-----
Confidence 3457887 556653 4789999999987644421 1 111 1112211 133566776533
Q ss_pred cccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEE-EEcCCCCCCCCcccCCCCCcccEEecCC
Q 042680 276 LGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVL-IINGADLGSGGWHCADKPSLKPMLYRPN 353 (530)
Q Consensus 276 ~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~Vl-ViGG~~~g~~g~~~~~~p~~~~eiYDP~ 353 (530)
..+.++|+.. .+.... ... ..-.....-|||+.+ +.++.. ..+.+||..
T Consensus 138 ------------~~v~~~d~~~--~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~-------------~~v~~~d~~ 188 (391)
T 1l0q_A 138 ------------KTVSVINTVT--KAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS-------------MSISVIDTV 188 (391)
T ss_dssp ------------TEEEEEETTT--TEEEEEEECC--SSEEEEEECTTSSEEEEEETTT-------------TEEEEEETT
T ss_pred ------------CEEEEEECCC--CcEEEEEecC--CCcceEEECCCCCEEEEEeCCC-------------CEEEEEECC
Confidence 2356677653 332222 211 112344556899655 555432 157899998
Q ss_pred CCCCCceEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 354 APEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 354 t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
+. +....-.. ...-. ...+-|||+.+++++
T Consensus 189 ~~---~~~~~~~~--~~~~~-~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 189 TN---SVIDTVKV--EAAPS-GIAVNPEGTKAYVTN 218 (391)
T ss_dssp TT---EEEEEEEC--SSEEE-EEEECTTSSEEEEEE
T ss_pred CC---eEEEEEec--CCCcc-ceEECCCCCEEEEEe
Confidence 87 54432211 11112 234568997666665
No 72
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.50 E-value=1.3 Score=42.86 Aligned_cols=146 Identities=11% Similarity=0.018 Sum_probs=76.0
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...++|+.++.|+. ...+||..+++....+. .+ .+... .... .+++.+++++.+...
T Consensus 81 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~-----~~v~~-~~~~-----------~~~~~l~~~~~~~~~--- 139 (369)
T 3zwl_B 81 DVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SP-----VPVKR-VEFS-----------PCGNYFLAILDNVMK--- 139 (369)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CS-----SCEEE-EEEC-----------TTSSEEEEEECCBTT---
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cC-----CCeEE-EEEc-----------cCCCEEEEecCCccC---
Confidence 34578998888864 68899999988764443 11 11111 1221 256777776643111
Q ss_pred ccccccccccCCcEEEEEcCCCCCc--ceecC--------CCCc-cccceeeeecCCeEEEEcCCCCCCCCcccCCCCCc
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPE--WKIEK--------MPAP-RTMADGVLLPNGEVLIINGADLGSGGWHCADKPSL 345 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~--W~~~~--------M~~~-R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~ 345 (530)
....+..+|+...... +.... .... ........-|||+.+++|+.+ |
T Consensus 140 ---------~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-g------------ 197 (369)
T 3zwl_B 140 ---------NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-G------------ 197 (369)
T ss_dssp ---------BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-S------------
T ss_pred ---------CCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-C------------
Confidence 1123555665432111 11110 0000 023334455899999998764 1
Q ss_pred ccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 346 KPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 346 ~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.+.+||..++. +....+... ...-....+-|||+.+++|+..
T Consensus 198 ~i~i~d~~~~~-~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 198 KISKYDVSNNY-EYVDSIDLH---EKSISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp EEEEEETTTTT-EEEEEEECC---SSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEECCCCc-EeEEEEecC---CCceeEEEECCCCCEEEEecCC
Confidence 57899998731 112222211 1111223456899999998753
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.45 E-value=0.47 Score=46.43 Aligned_cols=144 Identities=13% Similarity=0.127 Sum_probs=78.7
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...++|+++++|+ ....+||..++++. .+..+.+. ..+... .... .+++.+++|+.+
T Consensus 15 ~~s~~~~~l~~~~~d~~v~i~~~~~~~~~-~~~~~~~h--~~~v~~-~~~~-----------~~~~~l~~~~~d------ 73 (372)
T 1k8k_C 15 AWNKDRTQIAICPNNHEVHIYEKSGNKWV-QVHELKEH--NGQVTG-VDWA-----------PDSNRIVTCGTD------ 73 (372)
T ss_dssp EECTTSSEEEEECSSSEEEEEEEETTEEE-EEEEEECC--SSCEEE-EEEE-----------TTTTEEEEEETT------
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCCcEE-eeeeecCC--CCcccE-EEEe-----------CCCCEEEEEcCC------
Confidence 4457999999986 46889999998743 22222211 111111 1111 257778887754
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-C-CCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-K-MPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~-M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
..+..+|... .++... . ........+....|||+.+++++.+ | .+.+||..+
T Consensus 74 -----------g~i~vwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~------------~v~i~d~~~ 127 (372)
T 1k8k_C 74 -----------RNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS-R------------VISICYFEQ 127 (372)
T ss_dssp -----------SCEEEEEEET--TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-S------------SEEEEEEET
T ss_pred -----------CeEEEEECCC--CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC-C------------EEEEEEecC
Confidence 1245677653 444432 2 2222223344556899999998864 1 467888876
Q ss_pred CCCCceEEecCCCCC-CcccccceecCCCeEEEcCCCC
Q 042680 355 PEGQRFAELAPTDIP-RMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 355 ~~g~~Wt~la~~~~~-R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.. .|........+ ...-......||++.+++|+..
T Consensus 128 ~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 128 EN--DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TT--TEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CC--cceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 61 23322222111 1111223456899999998753
No 74
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.41 E-value=0.11 Score=51.43 Aligned_cols=144 Identities=9% Similarity=0.040 Sum_probs=74.5
Q ss_pred EecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 200 LLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 200 llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
..++|++++.|+. ...+||..++.|. .+..+.+. ..+. .++ ... .+++.+++|+.+
T Consensus 19 ~s~~g~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~~h--~~~v--~~~--~~s--------~~~~~l~s~s~d------- 76 (377)
T 3dwl_C 19 FNSQRTEFVTTTATNQVELYEQDGNGWK-HARTFSDH--DKIV--TCV--DWA--------PKSNRIVTCSQD------- 76 (377)
T ss_dssp ECSSSSEEECCCSSSCBCEEEEETTEEE-ECCCBCCC--SSCE--EEE--EEC--------TTTCCEEEEETT-------
T ss_pred ECCCCCEEEEecCCCEEEEEEccCCceE-EEEEEecC--CceE--EEE--EEe--------CCCCEEEEEeCC-------
Confidence 4579999998863 5789999999775 44444321 1111 111 111 257778887754
Q ss_pred cccccccccCCcEEEEEcCCCCCcceec-CC-CCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCC
Q 042680 278 EEEKRFVNALDDCARMVVTSPNPEWKIE-KM-PAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAP 355 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M-~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~ 355 (530)
.++..+|+.. ...|... .+ .....-.+....|||+.+++|+.+. .+.+||..+.
T Consensus 77 ----------~~v~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------------~i~iwd~~~~ 132 (377)
T 3dwl_C 77 ----------RNAYVYEKRP-DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR-------------VISVCYFEQE 132 (377)
T ss_dssp ----------SSEEEC-------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS-------------CEEECCC---
T ss_pred ----------CeEEEEEcCC-CCceeeeeEecccCCceEEEEECCCCCEEEEEecCC-------------eEEEEEECCc
Confidence 1245566653 1124432 22 2222233444458999999988651 5778998776
Q ss_pred CCCceEEecCCCC-CCcccccceecCCCeEEEcCCCC
Q 042680 356 EGQRFAELAPTDI-PRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 356 ~g~~Wt~la~~~~-~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
. .|.....+.. -...-......|||+.++.|+..
T Consensus 133 ~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 133 N--DWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp ----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred c--cceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 1 2332222221 11111223456899999998864
No 75
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.35 E-value=0.28 Score=48.57 Aligned_cols=146 Identities=14% Similarity=0.112 Sum_probs=67.0
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCe-EEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANK-IIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLY 275 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~-w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 275 (530)
...++|++++.|+ ....+||..+++ |. ....+.+. ..+ -.++. .. .+++.+++|+.+
T Consensus 62 ~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~-~~~~~~~~--~~~--v~~~~--~~--------~~~~~l~~~~~d----- 121 (377)
T 3dwl_C 62 DWAPKSNRIVTCSQDRNAYVYEKRPDGTWK-QTLVLLRL--NRA--ATFVR--WS--------PNEDKFAVGSGA----- 121 (377)
T ss_dssp EECTTTCCEEEEETTSSEEEC------CCC-CEEECCCC--SSC--EEEEE--CC--------TTSSCCEEEESS-----
T ss_pred EEeCCCCEEEEEeCCCeEEEEEcCCCCcee-eeeEeccc--CCc--eEEEE--EC--------CCCCEEEEEecC-----
Confidence 3457899888887 468899998876 32 11111111 111 11111 11 257777887754
Q ss_pred cccccccccccCCcEEEEEcCCCCCcceec-CCC--CccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecC
Q 042680 276 LGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMP--APRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRP 352 (530)
Q Consensus 276 ~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~--~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP 352 (530)
..+..+|... ...|... .+. ....-.+....|||+.+++|+.+ | ++.+||.
T Consensus 122 ------------~~i~iwd~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-~------------~i~iwd~ 175 (377)
T 3dwl_C 122 ------------RVISVCYFEQ-ENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD-R------------KAYVLSA 175 (377)
T ss_dssp ------------SCEEECCC------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS-S------------CEEEEEE
T ss_pred ------------CeEEEEEECC-cccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC-C------------EEEEEEE
Confidence 1244556543 2234332 222 22223344556899999998865 1 4667886
Q ss_pred CCCC------CC-------ceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 353 NAPE------GQ-------RFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 353 ~t~~------g~-------~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.+.. .. .-..+..... ...-.....-|||+.+++|+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~d 226 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEYPS-GGWVHAVGFSPSGNALAYAGHD 226 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECCCC-SSSEEEEEECTTSSCEEEEETT
T ss_pred EecccCCCccccccccccchhhhhhcccC-CceEEEEEECCCCCEEEEEeCC
Confidence 5321 00 1112222211 1111123456899999988754
No 76
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.29 E-value=4.2 Score=40.48 Aligned_cols=176 Identities=16% Similarity=0.180 Sum_probs=88.0
Q ss_pred ccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCC-cEEEEeC--
Q 042680 136 LSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDG-NVYVFAN-- 211 (530)
Q Consensus 136 L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G-~lfv~Gg-- 211 (530)
.+||+.++.|+.++ ++.+| ..++ .....+ .. |.. ..+ .+...++| ++|+.|+
T Consensus 136 spdg~~l~sgs~d~-~i~iwd~~~~-----~~~~~~-~~---------h~~-------~V~-~~~~~~~~~~~l~s~s~D 191 (344)
T 4gqb_B 136 LSSGTQAVSGSKDI-CIKVWDLAQQ-----VVLSSY-RA---------HAA-------QVT-CVAASPHKDSVFLSCSED 191 (344)
T ss_dssp CTTSSEEEEEETTS-CEEEEETTTT-----EEEEEE-CC---------CSS-------CEE-EEEECSSCTTEEEEEETT
T ss_pred CCCCCEEEEEeCCC-eEEEEECCCC-----cEEEEE-cC---------cCC-------ceE-EEEecCCCCCceeeeccc
Confidence 56899999988764 67778 5542 111111 00 000 000 12234566 5888876
Q ss_pred ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEE
Q 042680 212 NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCA 291 (530)
Q Consensus 212 ~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~ 291 (530)
..+.+||..+++....+.. . ....... +....| .+++++++|+.+ ..+.
T Consensus 192 ~~v~iwd~~~~~~~~~~~~-~--~~~~~~~-~~~~~p----------~~~~~l~sg~~d-----------------g~v~ 240 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGC-S--APGYLPT-SLAWHP----------QQSEVFVFGDEN-----------------GTVS 240 (344)
T ss_dssp SCEEEEETTSSSCEEECC-------CCCEE-EEEECS----------SCTTEEEEEETT-----------------SEEE
T ss_pred cccccccccccceeeeeec-c--eeeccce-eeeecC----------CCCcceEEeccC-----------------CcEE
Confidence 4688999998875533321 1 0111100 112222 257888888754 1355
Q ss_pred EEEcCCCCCcceecCCCCccccceeeeecCC-eEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCC
Q 042680 292 RMVVTSPNPEWKIEKMPAPRTMADGVLLPNG-EVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPR 370 (530)
Q Consensus 292 ~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG-~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R 370 (530)
.+|........+.. -....+ .+...-||| ++++.|+.+ | ++.+||-.+. +-..+.
T Consensus 241 ~wd~~~~~~~~~~~-~h~~~v-~~v~fsp~g~~~lasgs~D-~------------~i~vwd~~~~---~~~~~~------ 296 (344)
T 4gqb_B 241 LVDTKSTSCVLSSA-VHSQCV-TGLVFSPHSVPFLASLSED-C------------SLAVLDSSLS---ELFRSQ------ 296 (344)
T ss_dssp EEESCC--CCEEEE-CCSSCE-EEEEECSSSSCCEEEEETT-S------------CEEEECTTCC---EEEEEC------
T ss_pred EEECCCCcEEEEEc-CCCCCE-EEEEEccCCCeEEEEEeCC-C------------eEEEEECCCC---cEEEEc------
Confidence 67765311111111 111111 122334788 577777654 1 5789998776 433221
Q ss_pred ccccc----ceecCCCe-EEEcCCCC
Q 042680 371 MYHSV----ANLLPDGK-VFVGGSND 391 (530)
Q Consensus 371 ~yHS~----a~LLpdGr-Vlv~GG~~ 391 (530)
.|.. ...-|||+ +++.||.+
T Consensus 297 -~H~~~V~~v~~sp~~~~llas~s~D 321 (344)
T 4gqb_B 297 -AHRDFVRDATWSPLNHSLLTTVGWD 321 (344)
T ss_dssp -CCSSCEEEEEECSSSTTEEEEEETT
T ss_pred -CCCCCEEEEEEeCCCCeEEEEEcCC
Confidence 1321 22347775 77777754
No 77
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=93.18 E-value=1.9 Score=41.65 Aligned_cols=140 Identities=14% Similarity=0.157 Sum_probs=72.5
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...++|++++.|+. ...+||..+++-...+..- ... -.++.+ . .+++.+++|+.+
T Consensus 62 ~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h----~~~---v~~~~~--~--------~~~~~l~sgs~D------ 118 (304)
T 2ynn_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH----PDY---IRSIAV--H--------PTKPYVLSGSDD------ 118 (304)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECC----SSC---EEEEEE--C--------SSSSEEEEEETT------
T ss_pred EEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCC----CCc---EEEEEE--c--------CCCCEEEEECCC------
Confidence 34579999988874 6889999998765444211 111 111211 1 257778888764
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-CCC-Cccccceeeeec-CCeEEEEcCCCCCCCCcccCCCCCcccEEecCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-KMP-APRTMADGVLLP-NGEVLIINGADLGSGGWHCADKPSLKPMLYRPN 353 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~-~~R~~~~~vvLp-dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~ 353 (530)
.++..+|.. ..+... .+. ....-.+...-| |+++++.|+.+. ++.+||..
T Consensus 119 -----------~~v~lWd~~---~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~-------------~v~iwd~~ 171 (304)
T 2ynn_A 119 -----------LTVKLWNWE---NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR-------------TVKVWSLG 171 (304)
T ss_dssp -----------SCEEEEEGG---GTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTS-------------EEEEEETT
T ss_pred -----------CeEEEEECC---CCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCC-------------eEEEEECC
Confidence 135566765 223322 111 111112223336 678999888651 57889986
Q ss_pred CCCCCceEEecCCCCCCcccccce-ecCCCeEEEcCCCC
Q 042680 354 APEGQRFAELAPTDIPRMYHSVAN-LLPDGKVFVGGSND 391 (530)
Q Consensus 354 t~~g~~Wt~la~~~~~R~yHS~a~-LLpdGrVlv~GG~~ 391 (530)
+... ..+.... ..+.-...+. ..+|++.++.|+..
T Consensus 172 ~~~~-~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~s~D 207 (304)
T 2ynn_A 172 QSTP-NFTLTTG--QERGVNYVDYYPLPDKPYMITASDD 207 (304)
T ss_dssp CSSC-SEEEECC--CTTCEEEEEECCSTTCCEEEEEETT
T ss_pred CCCc-cceeccC--CcCcEEEEEEEEcCCCCEEEEEcCC
Confidence 5411 2222111 0010011111 13588899988853
No 78
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.03 E-value=13 Score=41.15 Aligned_cols=137 Identities=11% Similarity=0.127 Sum_probs=74.7
Q ss_pred EecCCcEEEEeC-ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccccc
Q 042680 200 LLPDGNVYVFAN-NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGE 278 (530)
Q Consensus 200 llp~G~lfv~Gg-~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~ 278 (530)
.-.+|+|++... ....+||+.++++. .+..-.+.+.+. -.+++. + .++.|++... . +
T Consensus 502 ~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~---i~~i~~--------d--~~g~lWi~T~-~-G------ 559 (781)
T 3v9f_A 502 QDSEGRFWIGTFGGGVGIYTPDMQLVR-KFNQYEGFCSNT---INQIYR--------S--SKGQMWLATG-E-G------ 559 (781)
T ss_dssp ECTTCCEEEEESSSCEEEECTTCCEEE-EECTTTTCSCSC---EEEEEE--------C--TTSCEEEEET-T-E------
T ss_pred EcCCCCEEEEEcCCCEEEEeCCCCeEE-EccCCCCCCCCe---eEEEEE--------C--CCCCEEEEEC-C-C------
Confidence 345899988764 67889999999887 443211101111 012211 1 2677776532 1 1
Q ss_pred ccccccccCCcE-EEEEcCCCCCccee---c-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCC
Q 042680 279 EEKRFVNALDDC-ARMVVTSPNPEWKI---E-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPN 353 (530)
Q Consensus 279 ~~~~~~~a~~s~-~~~dp~~~~~~W~~---~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~ 353 (530)
. .+||+.. .+++. . .++.... .+.+.-.+|+|++.+. . | ..+|||+
T Consensus 560 -----------lv~~~d~~~--~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-~-G-------------l~~~~~~ 610 (781)
T 3v9f_A 560 -----------LVCFPSARN--FDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-T-G-------------ISCYITS 610 (781)
T ss_dssp -----------EEEESCTTT--CCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-S-C-------------EEEEETT
T ss_pred -----------ceEEECCCC--CcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-C-c-------------eEEEECC
Confidence 2 3455542 33432 2 3554433 3344446799988542 2 2 4689999
Q ss_pred CCCCCceEEecC---CCCCCcccccceecCCCeEEEcCCC
Q 042680 354 APEGQRFAELAP---TDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 354 t~~g~~Wt~la~---~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
+. ++..... ++.......+++..+||++|++|.+
T Consensus 611 ~~---~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~ 647 (781)
T 3v9f_A 611 KK---CFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSIN 647 (781)
T ss_dssp TT---EEEEECGGGTCCSSCEEEEEEEECTTSCEEEEETT
T ss_pred CC---ceEEecccCCccccccccCceEECCCCEEEEECCC
Confidence 88 7765432 2222222234556789999998864
No 79
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.02 E-value=7.7 Score=38.39 Aligned_cols=130 Identities=16% Similarity=0.243 Sum_probs=70.8
Q ss_pred ecCCcEEEEe-CceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccc
Q 042680 201 LPDGNVYVFA-NNRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEE 279 (530)
Q Consensus 201 lp~G~lfv~G-g~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~ 279 (530)
+.+|.||+.+ +....++|+++++.....+ .+ .. .+..+ .++.||+....
T Consensus 237 ~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~-~~----~~--~~~~~-------------~~~~l~~~~~~---------- 286 (376)
T 3q7m_A 237 VVNGVVFALAYNGNLTALDLRSGQIMWKRE-LG----SV--NDFIV-------------DGNRIYLVDQN---------- 286 (376)
T ss_dssp EETTEEEEECTTSCEEEEETTTCCEEEEEC-CC----CE--EEEEE-------------ETTEEEEEETT----------
T ss_pred EECCEEEEEecCcEEEEEECCCCcEEeecc-CC----CC--CCceE-------------ECCEEEEEcCC----------
Confidence 3488888876 3467899999885332221 11 11 01111 26788776421
Q ss_pred cccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCc
Q 042680 280 EKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQR 359 (530)
Q Consensus 280 ~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~ 359 (530)
..+.+||+.+....|+...+.. +.....++ .+|+||+... . | ...+||+++.. ..
T Consensus 287 --------g~l~~~d~~tG~~~w~~~~~~~-~~~~~~~~-~~~~l~v~~~-~-g------------~l~~~d~~tG~-~~ 341 (376)
T 3q7m_A 287 --------DRVMALTIDGGVTLWTQSDLLH-RLLTSPVL-YNGNLVVGDS-E-G------------YLHWINVEDGR-FV 341 (376)
T ss_dssp --------CCEEEEETTTCCEEEEECTTTT-SCCCCCEE-ETTEEEEECT-T-S------------EEEEEETTTCC-EE
T ss_pred --------CeEEEEECCCCcEEEeecccCC-CcccCCEE-ECCEEEEEeC-C-C------------eEEEEECCCCc-EE
Confidence 1256788876556687753332 23333343 4888887542 1 1 46789998861 13
Q ss_pred eEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 360 FAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 360 Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
|+.-. .-.....+. +..+|+||+...
T Consensus 342 ~~~~~--~~~~~~~~~--~~~~~~l~v~~~ 367 (376)
T 3q7m_A 342 AQQKV--DSSGFQTEP--VAADGKLLIQAK 367 (376)
T ss_dssp EEEEC--CTTCBCSCC--EEETTEEEEEBT
T ss_pred EEEec--CCCcceeCC--EEECCEEEEEeC
Confidence 54321 111222222 234999998765
No 80
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.01 E-value=0.55 Score=46.58 Aligned_cols=145 Identities=10% Similarity=0.082 Sum_probs=77.5
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...|+|++++.|+. .+.+||..+++|.....-..+ . . +...-+... .+++.+++|+.+.
T Consensus 23 ~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~-h-~----~~v~~~~~s--------p~g~~l~s~s~D~----- 83 (345)
T 3fm0_A 23 AWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEG-H-Q----RTVRKVAWS--------PCGNYLASASFDA----- 83 (345)
T ss_dssp EECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSS-C-S----SCEEEEEEC--------TTSSEEEEEETTS-----
T ss_pred EECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccc-c-C----CcEEEEEEC--------CCCCEEEEEECCC-----
Confidence 34579999998874 688999999987522111111 1 1 111111112 2678888887651
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-CC--CCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-KM--PAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPN 353 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M--~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~ 353 (530)
++..+|... ..++.. .+ ....+ .+...-|||+.++.|+.+. ++.+||..
T Consensus 84 ------------~v~iw~~~~--~~~~~~~~~~~h~~~v-~~v~~sp~~~~l~s~s~D~-------------~v~iwd~~ 135 (345)
T 3fm0_A 84 ------------TTCIWKKNQ--DDFECVTTLEGHENEV-KSVAWAPSGNLLATCSRDK-------------SVWVWEVD 135 (345)
T ss_dssp ------------CEEEEEECC--C-EEEEEEECCCSSCE-EEEEECTTSSEEEEEETTS-------------CEEEEEEC
T ss_pred ------------cEEEEEccC--CCeEEEEEccCCCCCc-eEEEEeCCCCEEEEEECCC-------------eEEEEECC
Confidence 234555542 333322 22 12222 2334458999999998651 57789887
Q ss_pred CCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCCC
Q 042680 354 APEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 354 t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~ 392 (530)
+.. .+..+..+......-.....-|||++++.|+...
T Consensus 136 ~~~--~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 136 EED--EYECVSVLNSHTQDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp TTS--CEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS
T ss_pred CCC--CeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC
Confidence 651 2332221111111112234568999999988643
No 81
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.66 E-value=8.1 Score=37.75 Aligned_cols=19 Identities=5% Similarity=0.006 Sum_probs=14.7
Q ss_pred eeEEEEeCCCCcEEEcccc
Q 042680 99 CHSIFYDYNKNAVKALKVQ 117 (530)
Q Consensus 99 a~~~~yDp~t~~w~~l~~~ 117 (530)
-+.+.+|+.+++++.+...
T Consensus 29 i~~~~~d~~~g~~~~~~~~ 47 (361)
T 3scy_A 29 IYTFRFNEETGESLPLSDA 47 (361)
T ss_dssp EEEEEEETTTCCEEEEEEE
T ss_pred EEEEEEeCCCCCEEEeecc
Confidence 4577789999998887654
No 82
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=92.57 E-value=2.6 Score=41.30 Aligned_cols=137 Identities=18% Similarity=0.200 Sum_probs=78.0
Q ss_pred EecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 200 LLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 200 llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
..+++++++.|+ ....+||..+++..+.+..-+ ..... ...- .+++.+++|+.+
T Consensus 88 ~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~-----~~~~~-~~~s-----------pdg~~l~~g~~d------- 143 (321)
T 3ow8_A 88 ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGP-----VDAWT-LAFS-----------PDSQYLATGTHV------- 143 (321)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCT-----TCCCC-EEEC-----------TTSSEEEEECTT-------
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCC-----ccEEE-EEEC-----------CCCCEEEEEcCC-------
Confidence 446888888886 468899999987664443211 11111 1221 267888888754
Q ss_pred cccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCC
Q 042680 278 EEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEG 357 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g 357 (530)
..+..+|.......+... .. .....+...-|||+.+++|+.+ | .+.+||..+.
T Consensus 144 ----------g~v~i~~~~~~~~~~~~~-~~-~~~v~~~~~spdg~~lasg~~d-g------------~i~iwd~~~~-- 196 (321)
T 3ow8_A 144 ----------GKVNIFGVESGKKEYSLD-TR-GKFILSIAYSPDGKYLASGAID-G------------IINIFDIATG-- 196 (321)
T ss_dssp ----------SEEEEEETTTCSEEEEEE-CS-SSCEEEEEECTTSSEEEEEETT-S------------CEEEEETTTT--
T ss_pred ----------CcEEEEEcCCCceeEEec-CC-CceEEEEEECCCCCEEEEEcCC-C------------eEEEEECCCC--
Confidence 124556665322222211 11 1112234456999999998865 1 5789999876
Q ss_pred CceE-EecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 358 QRFA-ELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 358 ~~Wt-~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
+-. .+... ...-.....-|||+.++.|+..
T Consensus 197 -~~~~~~~~h---~~~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 197 -KLLHTLEGH---AMPIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp -EEEEEECCC---SSCCCEEEECTTSCEEEEECTT
T ss_pred -cEEEEEccc---CCceeEEEEcCCCCEEEEEcCC
Confidence 432 22211 1111123456899999999864
No 83
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.50 E-value=12 Score=40.53 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=70.1
Q ss_pred ecCC--cEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 201 LPDG--NVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 201 lp~G--~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
.+++ .+++.|+ ..+.+||..+++....+.. . .. +. .++. .. .+++++++|+.+ +
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~---h-~~-~v--~~v~--~s--------pdg~~l~sg~~D-g---- 583 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG---H-TG-YV--STVA--VS--------PDGSLCASGGKD-G---- 583 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC---C-SS-CE--EEEE--EC--------TTSSEEEEEETT-S----
T ss_pred eCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC---C-CC-CE--EEEE--Ee--------CCCCEEEEEeCC-C----
Confidence 4555 4666665 4688999998876543321 1 11 11 1111 11 268888888865 1
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPE 356 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~ 356 (530)
.+..+|+.. .+-.. .+.......+...-||+++++.+... .+.+||..+.
T Consensus 584 ------------~i~iwd~~~--~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~~--------------~i~iwd~~~~- 633 (694)
T 3dm0_A 584 ------------VVLLWDLAE--GKKLY-SLEANSVIHALCFSPNRYWLCAATEH--------------GIKIWDLESK- 633 (694)
T ss_dssp ------------BCEEEETTT--TEEEE-CCBCSSCEEEEEECSSSSEEEEEETT--------------EEEEEETTTT-
T ss_pred ------------eEEEEECCC--CceEE-EecCCCcEEEEEEcCCCcEEEEEcCC--------------CEEEEECCCC-
Confidence 244566643 21111 22222223344455888887765422 3678887766
Q ss_pred CCceE-EecCC--------------CCC--CcccccceecCCCeEEEcCCCC
Q 042680 357 GQRFA-ELAPT--------------DIP--RMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 357 g~~Wt-~la~~--------------~~~--R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
+-. .+... ... ..+.+....-|||+.++.||.+
T Consensus 634 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~D 683 (694)
T 3dm0_A 634 --SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTD 683 (694)
T ss_dssp --EEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETT
T ss_pred --CChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCC
Confidence 322 11100 000 1112223456899999999864
No 84
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.44 E-value=8.6 Score=37.55 Aligned_cols=28 Identities=11% Similarity=0.235 Sum_probs=20.1
Q ss_pred EEEecCCc-EEEEe--CceEEEEeCCCCeEE
Q 042680 198 VYLLPDGN-VYVFA--NNRSVVHDPKANKII 225 (530)
Q Consensus 198 ~~llp~G~-lfv~G--g~~~e~yDp~tn~w~ 225 (530)
+...|||+ ||+.. +....+||..++++.
T Consensus 216 ~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 216 LIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp EEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred EEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 45568997 66665 357889999888763
No 85
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=92.30 E-value=8.4 Score=37.08 Aligned_cols=27 Identities=11% Similarity=0.133 Sum_probs=19.6
Q ss_pred EEecCCcEEEEeC--------ceEEEEeCCCCeEE
Q 042680 199 YLLPDGNVYVFAN--------NRSVVHDPKANKII 225 (530)
Q Consensus 199 ~llp~G~lfv~Gg--------~~~e~yDp~tn~w~ 225 (530)
..-++|++|+... ....+||+.+++..
T Consensus 141 ~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 141 VFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT 175 (333)
T ss_dssp EECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE
T ss_pred EECCCCCEEEEeccccccCCCceEEEEeCCCCEEE
Confidence 4557999998764 35678888877655
No 86
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.17 E-value=1.9 Score=42.28 Aligned_cols=108 Identities=6% Similarity=0.007 Sum_probs=62.2
Q ss_pred cceEEEe-cCCcEEEEeC----ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCc
Q 042680 195 YPFVYLL-PDGNVYVFAN----NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGS 269 (530)
Q Consensus 195 Yp~~~ll-p~G~lfv~Gg----~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~ 269 (530)
||+.+.. +||+||+..| .....+|+.+++..+.++ ++. +.+ +..+.+ .++++|+..-.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~~--~~f---geGi~~-----------~g~~lyv~t~~ 84 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK-MDD--SYF---GEGLTL-----------LNEKLYQVVWL 84 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE-CCT--TCC---EEEEEE-----------ETTEEEEEETT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe-cCC--Ccc---eEEEEE-----------eCCEEEEEEec
Confidence 4555444 5699999865 578899999999886654 332 222 222211 25688887432
Q ss_pred cCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCC-eEEEEcCCCCCCCCcccCCCCCccc
Q 042680 270 VREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNG-EVLIINGADLGSGGWHCADKPSLKP 347 (530)
Q Consensus 270 ~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG-~VlViGG~~~g~~g~~~~~~p~~~~ 347 (530)
.+.+.+||+.. .+.. ..+.+.-.+-.+. +|| ++|+.+|.. ++
T Consensus 85 -----------------~~~v~viD~~t----~~v~~~i~~g~~~g~glt-~Dg~~l~vs~gs~--------------~l 128 (266)
T 2iwa_A 85 -----------------KNIGFIYDRRT----LSNIKNFTHQMKDGWGLA-TDGKILYGSDGTS--------------IL 128 (266)
T ss_dssp -----------------CSEEEEEETTT----TEEEEEEECCSSSCCEEE-ECSSSEEEECSSS--------------EE
T ss_pred -----------------CCEEEEEECCC----CcEEEEEECCCCCeEEEE-ECCCEEEEECCCC--------------eE
Confidence 23467888753 2221 2222111122233 565 578777532 57
Q ss_pred EEecCCCC
Q 042680 348 MLYRPNAP 355 (530)
Q Consensus 348 eiYDP~t~ 355 (530)
...||++.
T Consensus 129 ~viD~~t~ 136 (266)
T 2iwa_A 129 YEIDPHTF 136 (266)
T ss_dssp EEECTTTC
T ss_pred EEEECCCC
Confidence 78999887
No 87
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.03 E-value=1.7 Score=42.64 Aligned_cols=146 Identities=14% Similarity=0.136 Sum_probs=70.0
Q ss_pred EecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 200 LLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 200 llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
-.|+|++++.|+ ..+.+||..++.|. .+..+.+. .. +.. .....| + ..+..+++|+.+ +
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~-~~~~~~~h-~~-~v~-~~~~~~-------~--~~~~~l~s~s~D-~----- 221 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWE-CVAVLNGH-EG-TVW-SSDFDK-------T--EGVFRLCSGSDD-S----- 221 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEE-EEEEECCC-SS-CEE-EEEECC-------S--SSSCEEEEEETT-S-----
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCee-EEEEccCC-CC-cEE-EEEecC-------C--CCeeEEEEEeCC-C-----
Confidence 347999999887 46788998887664 33333321 11 000 111111 0 135677787754 1
Q ss_pred cccccccccCCcEEEEEcCCC----CCcceec-CCCC-ccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEec
Q 042680 278 EEEKRFVNALDDCARMVVTSP----NPEWKIE-KMPA-PRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYR 351 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~----~~~W~~~-~M~~-~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYD 351 (530)
++..+|+... ...|... .++. .......+...++..++.+|.+ | ++.+||
T Consensus 222 -----------~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~d-g------------~v~iw~ 277 (330)
T 2hes_X 222 -----------TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGAD-G------------VLAVYE 277 (330)
T ss_dssp -----------CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETT-S------------CEEEEE
T ss_pred -----------eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCC-C------------EEEEEE
Confidence 2334444211 1235443 3321 1111222333344466677654 1 578999
Q ss_pred CCCCCCCceEEecCCCCCCcccc--cceecC--CCeEEEcCCCC
Q 042680 352 PNAPEGQRFAELAPTDIPRMYHS--VANLLP--DGKVFVGGSND 391 (530)
Q Consensus 352 P~t~~g~~Wt~la~~~~~R~yHS--~a~LLp--dGrVlv~GG~~ 391 (530)
..+. +|..+.........+. .....| ||++++.||.+
T Consensus 278 ~~~~---~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 278 EVDG---EWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp EETT---EEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETT
T ss_pred cCCC---ceEEEeccccccccceEEEEEEecCCCceEEEEecCC
Confidence 8877 7765432211111101 122345 78999998853
No 88
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=91.83 E-value=17 Score=42.28 Aligned_cols=57 Identities=12% Similarity=0.180 Sum_probs=34.6
Q ss_pred eeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 317 VLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 317 vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
...|||+.+++++.. .+.+||..+. .....-.......-. ....-|||+.+++|+..
T Consensus 805 ~~s~dg~~l~~~~~~--------------~v~~~d~~~~---~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~d 861 (1249)
T 3sfz_A 805 SWSADGDKIIVAAKN--------------KVLLFDIHTS---GLLAEIHTGHHSTIQ-YCDFSPYDHLAVIALSQ 861 (1249)
T ss_dssp CBCTTSSEEEEEETT--------------EEEEEETTTC---CEEEEEECSSSSCCC-EEEECSSTTEEEEECSS
T ss_pred EECCCCCEEEEEcCC--------------cEEEEEecCC---CceeEEcCCCCCceE-EEEEcCCCCEEEEEeCC
Confidence 445899999987632 4678998877 443221111111112 23456899999999864
No 89
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=91.78 E-value=6.2 Score=38.73 Aligned_cols=27 Identities=4% Similarity=-0.069 Sum_probs=19.9
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEE
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKII 225 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~ 225 (530)
...++|++++.|+ ....+||..+++..
T Consensus 254 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 282 (425)
T 1r5m_A 254 EFNDTNKLLLSASDDGTLRIWHGGNGNSQ 282 (425)
T ss_dssp EEETTTTEEEEEETTSCEEEECSSSBSCS
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCccc
Confidence 4457898888876 35789998886544
No 90
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=91.76 E-value=4.3 Score=39.08 Aligned_cols=24 Identities=4% Similarity=-0.064 Sum_probs=18.6
Q ss_pred EecCCcEEEEeC--ceEEEEeCCCCe
Q 042680 200 LLPDGNVYVFAN--NRSVVHDPKANK 223 (530)
Q Consensus 200 llp~G~lfv~Gg--~~~e~yDp~tn~ 223 (530)
..++|+.++.|+ ....+||..+++
T Consensus 169 ~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 169 YDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp ECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred ECCCCCEEEEecCCCCEEEEECCCCc
Confidence 347899888886 468899998764
No 91
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=91.76 E-value=14 Score=38.44 Aligned_cols=135 Identities=12% Similarity=0.153 Sum_probs=69.7
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...+||+.++.|+. ...+||..... .+.+..-. .+ -.++. .. .+++.+++|+.+
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~~~~~-~~~~~~~~-----~~--v~~~~--~s--------~d~~~l~~~~~d------ 447 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNRNGQL-LQTLTGHS-----SS--VWGVA--FS--------PDDQTIASASDD------ 447 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTTCCE-EEEEECCS-----SC--EEEEE--EC--------TTSSEEEEEETT------
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCCE-EEEecCCC-----CC--eEEEE--EC--------CCCCEEEEEcCC------
Confidence 34579998888764 57889965443 32332111 11 01111 12 257778877654
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPE 356 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~ 356 (530)
..+..+|... ..-....-.... ..++..-|||+.+++++.+. ++.+||....
T Consensus 448 -----------~~v~~w~~~~--~~~~~~~~~~~~-v~~~~~spd~~~las~~~d~-------------~i~iw~~~~~- 499 (577)
T 2ymu_A 448 -----------KTVKLWNRNG--QLLQTLTGHSSS-VRGVAFSPDGQTIASASDDK-------------TVKLWNRNGQ- 499 (577)
T ss_dssp -----------SEEEEEETTS--CEEEEEECCSSC-EEEEEECTTSCEEEEEETTS-------------EEEEEETTSC-
T ss_pred -----------CEEEEEECCC--CEEEEEcCCCCC-EEEEEEcCCCCEEEEEeCCC-------------EEEEEcCCCC-
Confidence 1244566431 111111111122 23344569999999987651 5788996433
Q ss_pred CCceEEecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 357 GQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 357 g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
.-..+..-. .+. .....-|||+.++.|+.
T Consensus 500 --~~~~~~~h~-~~v--~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 500 --LLQTLTGHS-SSV--RGVAFSPDGQTIASASD 528 (577)
T ss_dssp --EEEEEECCS-SCE--EEEEECTTSSCEEEEET
T ss_pred --EEEEEeCCC-CCE--EEEEEcCCCCEEEEEEC
Confidence 333332111 010 11235689999999885
No 92
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=91.76 E-value=10 Score=37.04 Aligned_cols=135 Identities=10% Similarity=0.067 Sum_probs=67.6
Q ss_pred ecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccccc
Q 042680 201 LPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGE 278 (530)
Q Consensus 201 lp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~ 278 (530)
.+++. +++|+ ....+||..+++....+..- ..+.. ...+. .+++.+++|+.+ +
T Consensus 215 ~~~~~-~~~~~~~g~i~~~d~~~~~~~~~~~~~-----~~~i~-~~~~~-----------~~~~~l~~~~~d-~------ 269 (425)
T 1r5m_A 215 VDDDK-FVIPGPKGAIFVYQITEKTPTGKLIGH-----HGPIS-VLEFN-----------DTNKLLLSASDD-G------ 269 (425)
T ss_dssp EETTE-EEEECGGGCEEEEETTCSSCSEEECCC-----SSCEE-EEEEE-----------TTTTEEEEEETT-S------
T ss_pred cCCCE-EEEEcCCCeEEEEEcCCCceeeeeccC-----CCceE-EEEEC-----------CCCCEEEEEcCC-C------
Confidence 35655 55555 36789999887544233211 11111 11121 156677777754 1
Q ss_pred ccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCC
Q 042680 279 EEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQ 358 (530)
Q Consensus 279 ~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~ 358 (530)
.+..+|.......... .-. .....+....|+| .+++++.+ | .+.+||..+.
T Consensus 270 ----------~i~i~d~~~~~~~~~~-~~~-~~~i~~~~~~~~~-~l~~~~~d-~------------~i~i~d~~~~--- 320 (425)
T 1r5m_A 270 ----------TLRIWHGGNGNSQNCF-YGH-SQSIVSASWVGDD-KVISCSMD-G------------SVRLWSLKQN--- 320 (425)
T ss_dssp ----------CEEEECSSSBSCSEEE-CCC-SSCEEEEEEETTT-EEEEEETT-S------------EEEEEETTTT---
T ss_pred ----------EEEEEECCCCccceEe-cCC-CccEEEEEECCCC-EEEEEeCC-C------------cEEEEECCCC---
Confidence 2455665431111111 111 1222344556889 67777654 1 5789998776
Q ss_pred ceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 359 RFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 359 ~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
+-...- ......-....+-|||+++++|+..
T Consensus 321 ~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 321 TLLALS--IVDGVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp EEEEEE--ECTTCCEEEEEECTTSSEEEEEETT
T ss_pred cEeEec--ccCCccEEEEEEcCCCCEEEEEECC
Confidence 432211 1111111233456899999998853
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=91.52 E-value=3.7 Score=39.52 Aligned_cols=29 Identities=14% Similarity=0.313 Sum_probs=22.5
Q ss_pred Eec-CCcEEEEeCc--eEEEEeCCCCeEEEEc
Q 042680 200 LLP-DGNVYVFANN--RSVVHDPKANKIIREF 228 (530)
Q Consensus 200 llp-~G~lfv~Gg~--~~e~yDp~tn~w~~~~ 228 (530)
..+ ++++++.|+. ...+||..+++....+
T Consensus 123 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 123 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 346 8999998874 6889999998876544
No 94
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=91.49 E-value=1.7 Score=42.83 Aligned_cols=139 Identities=16% Similarity=0.197 Sum_probs=75.5
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...++|++++.|+ ..+.+||..+++-...+.. . ..+ -.++.+ . .+++.+++|+.+
T Consensus 191 ~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~---h--~~~--v~~v~~--~--------p~~~~l~s~s~d------ 247 (340)
T 1got_B 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG---H--ESD--INAICF--F--------PNGNAFATGSDD------ 247 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCSEEEEECC---C--SSC--EEEEEE--C--------TTSSEEEEEETT------
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC---C--cCC--EEEEEE--c--------CCCCEEEEEcCC------
Confidence 4557999999987 4688999998875543321 1 111 112211 1 267888888764
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-CCCCc-cccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAP-RTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~-R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
.++..+|... .+-... ..... ....+...-|||+++++|+.+ | .+.+||..+
T Consensus 248 -----------~~v~iwd~~~--~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~ 301 (340)
T 1got_B 248 -----------ATCRLFDLRA--DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-F------------NCNVWDALK 301 (340)
T ss_dssp -----------SCEEEEETTT--TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-S------------EEEEEETTT
T ss_pred -----------CcEEEEECCC--CcEEEEEccCCcccceEEEEECCCCCEEEEECCC-C------------eEEEEEccc
Confidence 1345667653 111111 11110 011223345899999998865 1 578999876
Q ss_pred CCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 355 PEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 355 ~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
. +.-..+.... .+. .....-|||+.++.||.+
T Consensus 302 ~--~~~~~~~~h~-~~v--~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 302 A--DRAGVLAGHD-NRV--SCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp C--CEEEEEECCS-SCE--EEEEECTTSSCEEEEETT
T ss_pred C--cEeeEeecCC-CcE--EEEEEcCCCCEEEEEcCC
Confidence 5 1222332111 111 122346899999998854
No 95
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=91.26 E-value=3.9 Score=42.05 Aligned_cols=72 Identities=17% Similarity=0.204 Sum_probs=41.1
Q ss_pred cceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEe-cCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 313 MADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLY-RPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 313 ~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiY-DP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.|.+++.-||+||..|-...|.-|.+...+ ...|..- -|... +...++. -.+|+.| |..||+||.-|.|.
T Consensus 287 ~hs~alt~~G~v~~wG~n~~GqLG~g~~~~-~~~p~~v~~~~~~---~v~~va~----G~~hs~a-lt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWNKFGQVGVGNNLD-QCSPVQVRFPDDQ---KVVQVSC----GWRHTLA-VTERNNVFAWGRGT 357 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSSSC-EEEEEEECCGGGC---CEEEEEE----CSSEEEE-EETTSCEEEEECCT
T ss_pred CEEEEEcCCCeEEEeeCCCCCCCCCCCCCC-CccCEEEeccCCC---cEEEEEe----CCCeEEE-EeCCCCEEEecCCC
Confidence 577777889999999965555444322111 1122211 12222 4443332 2457655 55899999999987
Q ss_pred CC
Q 042680 392 ND 393 (530)
Q Consensus 392 ~~ 393 (530)
++
T Consensus 358 ~G 359 (406)
T 4d9s_A 358 NG 359 (406)
T ss_dssp TS
T ss_pred CC
Confidence 65
No 96
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=91.02 E-value=5 Score=41.21 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=39.7
Q ss_pred cceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCCC
Q 042680 313 MADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 313 ~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~ 392 (530)
.|..++.-||+||..|-...|.-|.+.. .....|..-+...+ .+...++. -.+|+. +|..||+||.-|.|..
T Consensus 235 ~ht~~l~~~G~v~~wG~n~~GqlG~g~~-~~~~~p~~v~~~~~--~~v~~i~~----G~~hs~-alt~~G~v~~wG~n~~ 306 (406)
T 4d9s_A 235 RHTISVSYSGALYTYGWSKYGQLGHGDL-EDHLIPHKLEALSN--SFISQISG----GWRHTM-ALTSDGKLYGWGWNKF 306 (406)
T ss_dssp SEEEEEETTCCEEEEECCTTSTTCSSSC-CCEEEEEECGGGTT--SCEEEEEE----CSSEEE-EEETTSCEEEEECCTT
T ss_pred CcEEEEcCCCCEEEeeCCCCCCCCCCCC-cCccccEEecccCC--CCEEEEEe----cCCEEE-EEcCCCeEEEeeCCCC
Confidence 5677777899999999655454432211 11111221111111 12333321 235664 5568999999998865
Q ss_pred C
Q 042680 393 D 393 (530)
Q Consensus 393 ~ 393 (530)
+
T Consensus 307 G 307 (406)
T 4d9s_A 307 G 307 (406)
T ss_dssp S
T ss_pred C
Confidence 4
No 97
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=90.94 E-value=1.7 Score=43.34 Aligned_cols=24 Identities=4% Similarity=0.111 Sum_probs=12.6
Q ss_pred ecCCcEEEEeC-ceEEEEeCCCCeE
Q 042680 201 LPDGNVYVFAN-NRSVVHDPKANKI 224 (530)
Q Consensus 201 lp~G~lfv~Gg-~~~e~yDp~tn~w 224 (530)
.++|++++.+. ..+.+||..+++-
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~ 127 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKES 127 (357)
T ss_dssp ETTTEEEEEETTSCEEEC-------
T ss_pred cCCCCEEEEECCCEEEEeeccccce
Confidence 47888887665 4678899988753
No 98
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.89 E-value=9.5 Score=38.42 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=18.2
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCe
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANK 223 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~ 223 (530)
...++|+.++.|+. ...+||..+++
T Consensus 237 ~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 237 RWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp EECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred eecCCCCeeeeeeccccceEEeecccc
Confidence 44578898888764 57788887664
No 99
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=90.80 E-value=27 Score=40.53 Aligned_cols=148 Identities=11% Similarity=0.086 Sum_probs=75.0
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCC--CCCCccCC--CceEeeccCCCCCCCCCCCCcEEEEecCccCC
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLP--GGARSYPA--TGTSVLLPLYLPRDTYKPVDAEVLICGGSVRE 272 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp--~~~r~yp~--~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~ 272 (530)
...++|+.++.|+. ...+||..+++....+..-. ......+. ......+... .+++.+++++..
T Consensus 750 ~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--------~dg~~l~~~~~~-- 819 (1249)
T 3sfz_A 750 RFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS--------ADGDKIIVAAKN-- 819 (1249)
T ss_dssp EECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC--------TTSSEEEEEETT--
T ss_pred EEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC--------CCCCEEEEEcCC--
Confidence 45679999988874 68899998886553332110 00000000 0000011111 256766665521
Q ss_pred ccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEec
Q 042680 273 GLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYR 351 (530)
Q Consensus 273 ~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYD 351 (530)
.+..+|... ...... .-............|+|+.+++|+.+ | .+.+||
T Consensus 820 ----------------~v~~~d~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-g------------~v~vwd 868 (1249)
T 3sfz_A 820 ----------------KVLLFDIHT--SGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ-Y------------CVELWN 868 (1249)
T ss_dssp ----------------EEEEEETTT--CCEEEEEECSSSSCCCEEEECSSTTEEEEECSS-S------------CEEEEE
T ss_pred ----------------cEEEEEecC--CCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC-C------------eEEEEE
Confidence 245566653 222221 11122223334556899999999865 1 578999
Q ss_pred CCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCCC
Q 042680 352 PNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 352 P~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~ 392 (530)
..+. +-...-.... ..-......|||+.+++|+...
T Consensus 869 ~~~~---~~~~~~~~h~--~~v~~v~~spdg~~l~s~s~dg 904 (1249)
T 3sfz_A 869 IDSR---LKVADCRGHL--SWVHGVMFSPDGSSFLTASDDQ 904 (1249)
T ss_dssp TTTT---EEEEEECCCS--SCEEEEEECTTSSEEEEEETTS
T ss_pred cCCC---ceeeecCCCc--cceEEEEECCCCCEEEEEeCCC
Confidence 8776 3221111111 1111234568999998888653
No 100
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=90.65 E-value=3.4 Score=45.40 Aligned_cols=138 Identities=12% Similarity=0.161 Sum_probs=73.8
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...++|+.+++|+. ...+||..+++....+..-. .. ... ... . .+++.+++|+.+
T Consensus 62 ~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~----~~-v~~-~~~---s--------~~~~~l~~~~~d------ 118 (814)
T 3mkq_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP----DY-IRS-IAV---H--------PTKPYVLSGSDD------ 118 (814)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS----SC-EEE-EEE---C--------SSSSEEEEEETT------
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCC----CC-EEE-EEE---e--------CCCCEEEEEcCC------
Confidence 34579998888874 67899999988765443211 11 011 111 1 256667777643
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec---CCCCccccceeeeec-CCeEEEEcCCCCCCCCcccCCCCCcccEEecC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE---KMPAPRTMADGVLLP-NGEVLIINGADLGSGGWHCADKPSLKPMLYRP 352 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~---~M~~~R~~~~~vvLp-dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP 352 (530)
..+..+|... .|... .-..... .+...-| ||+.+++++.+ | ++.+||.
T Consensus 119 -----------g~i~vw~~~~---~~~~~~~~~~~~~~v-~~~~~~p~~~~~l~~~~~d-g------------~v~vwd~ 170 (814)
T 3mkq_A 119 -----------LTVKLWNWEN---NWALEQTFEGHEHFV-MCVAFNPKDPSTFASGCLD-R------------TVKVWSL 170 (814)
T ss_dssp -----------SEEEEEEGGG---TSEEEEEEECCSSCE-EEEEEETTEEEEEEEEETT-S------------EEEEEET
T ss_pred -----------CEEEEEECCC---CceEEEEEcCCCCcE-EEEEEEcCCCCEEEEEeCC-C------------eEEEEEC
Confidence 1345677652 23322 1122222 2334457 88899988765 1 5778988
Q ss_pred CCCCCCceEEecCCCCCCcccccceecC--CCeEEEcCCCC
Q 042680 353 NAPEGQRFAELAPTDIPRMYHSVANLLP--DGKVFVGGSND 391 (530)
Q Consensus 353 ~t~~g~~Wt~la~~~~~R~yHS~a~LLp--dGrVlv~GG~~ 391 (530)
.+... .+..... ..+. .......| ||+.+++|+..
T Consensus 171 ~~~~~-~~~~~~~--~~~~-v~~~~~~~~~~~~~l~~~~~d 207 (814)
T 3mkq_A 171 GQSTP-NFTLTTG--QERG-VNYVDYYPLPDKPYMITASDD 207 (814)
T ss_dssp TCSSC-SEEEECC--CTTC-CCEEEECCSTTCCEEEEECTT
T ss_pred CCCcc-eeEEecC--CCCC-EEEEEEEECCCCCEEEEEeCC
Confidence 66511 2222111 1111 11233345 88888888854
No 101
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=90.56 E-value=1.6 Score=43.45 Aligned_cols=135 Identities=16% Similarity=0.182 Sum_probs=73.3
Q ss_pred CCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccccccc
Q 042680 203 DGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEE 280 (530)
Q Consensus 203 ~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~ 280 (530)
+|++++.|+ ..+.+||..+++..+.+..- ..+. .+.... .+++.+++|+.+
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h-----~~~v-~~v~~~-----------p~~~~l~s~s~D---------- 261 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFETH-----ESDV-NSVRYY-----------PSGDAFASGSDD---------- 261 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECCC-----SSCE-EEEEEC-----------TTSSEEEEEETT----------
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCC-----CCCe-EEEEEe-----------CCCCEEEEEeCC----------
Confidence 678898887 46889999998876444211 1111 112222 257788888764
Q ss_pred ccccccCCcEEEEEcCCCCCcceec-CCCCccc-cceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCC
Q 042680 281 KRFVNALDDCARMVVTSPNPEWKIE-KMPAPRT-MADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQ 358 (530)
Q Consensus 281 ~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~-~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~ 358 (530)
.++..+|+.. .+-... .-..... ......-|+|+++++|+.+. ++.+||..+. +
T Consensus 262 -------~~v~lwd~~~--~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~-------------~i~vwd~~~~--~ 317 (354)
T 2pbi_B 262 -------ATCRLYDLRA--DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY-------------TINVWDVLKG--S 317 (354)
T ss_dssp -------SCEEEEETTT--TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-------------CEEEEETTTC--S
T ss_pred -------CeEEEEECCC--CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC-------------cEEEEECCCC--c
Confidence 1355677653 211111 1111011 11223448999999988651 5789998665 1
Q ss_pred ceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 359 RFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 359 ~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
....+... ...-.....-|||+.++.|+..
T Consensus 318 ~~~~l~~h---~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 318 RVSILFGH---ENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp EEEEECCC---SSCEEEEEECTTSSCEEEEETT
T ss_pred eEEEEECC---CCcEEEEEECCCCCEEEEEcCC
Confidence 23332211 1111223456899999999854
No 102
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=90.51 E-value=2.4 Score=47.22 Aligned_cols=57 Identities=14% Similarity=0.170 Sum_probs=33.3
Q ss_pred CCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCC---CeEEEcCCCC
Q 042680 321 NGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPD---GKVFVGGSND 391 (530)
Q Consensus 321 dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpd---GrVlv~GG~~ 391 (530)
||+.+++|+.+ | .+.+||..+.. ..+.....+......-.....-|| |+++++||..
T Consensus 169 d~~~l~sgs~d-g------------~I~iwd~~~~~-~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 169 ESRKFVTGGAD-N------------LVKIWKYNSDA-QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp GGCCEEEEETT-S------------CEEEEEEETTT-TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS
T ss_pred CCCEEEEEECC-C------------eEEEEeccCCc-ccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC
Confidence 68889988865 1 57788876651 134433322221111122345688 8999999854
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=90.26 E-value=2.7 Score=42.11 Aligned_cols=142 Identities=15% Similarity=0.177 Sum_probs=73.8
Q ss_pred Eec-CCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccC-CCceEeeccCCCCCCCCCCCCc-EEEEecCccCCcc
Q 042680 200 LLP-DGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYP-ATGTSVLLPLYLPRDTYKPVDA-EVLICGGSVREGL 274 (530)
Q Consensus 200 llp-~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp-~~g~svmlpl~~~~~~~~~~~g-kI~v~GG~~~~~~ 274 (530)
..+ ++++++.|+. .+.+||..+++....... + .+.+. ..+....+...| ++ .++++|+.+
T Consensus 89 ~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~-~--~~~~~~h~~~v~~~~~~p--------~~~~~l~s~~~d---- 153 (402)
T 2aq5_A 89 WCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLRE-P--VITLEGHTKRVGIVAWHP--------TAQNVLLSAGCD---- 153 (402)
T ss_dssp ECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCS-C--SEEEECCSSCEEEEEECS--------SBTTEEEEEETT----
T ss_pred eCCCCCCEEEEEeCCCeEEEEEccCCCCccccCC-c--eEEecCCCCeEEEEEECc--------CCCCEEEEEcCC----
Confidence 346 8999999874 588999988743200000 0 00000 001111111111 34 578887754
Q ss_pred ccccccccccccCCcEEEEEcCCCCCcceec-C-CCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecC
Q 042680 275 YLGEEEKRFVNALDDCARMVVTSPNPEWKIE-K-MPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRP 352 (530)
Q Consensus 275 ~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~-M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP 352 (530)
..+..+|+.. .+.... . -.....-.+....|||+.+++++.+ | .+.+||+
T Consensus 154 -------------g~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~------------~i~iwd~ 205 (402)
T 2aq5_A 154 -------------NVILVWDVGT--GAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-K------------RVRVIEP 205 (402)
T ss_dssp -------------SCEEEEETTT--TEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-S------------EEEEEET
T ss_pred -------------CEEEEEECCC--CCccEEEecCCCCCceEEEEECCCCCEEEEEecC-C------------cEEEEeC
Confidence 1355677653 222211 1 1122223344556899999998864 1 5789999
Q ss_pred CCCCCCceEE-e-cCCCCCCcccccceecCCCeEEEcCC
Q 042680 353 NAPEGQRFAE-L-APTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 353 ~t~~g~~Wt~-l-a~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
.+. +-.. + ....-.+ -......|||+++++|.
T Consensus 206 ~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~ 239 (402)
T 2aq5_A 206 RKG---TVVAEKDRPHEGTR--PVHAVFVSEGKILTTGF 239 (402)
T ss_dssp TTT---EEEEEEECSSCSSS--CCEEEECSTTEEEEEEE
T ss_pred CCC---ceeeeeccCCCCCc--ceEEEEcCCCcEEEEec
Confidence 887 4332 2 1111111 12345668999999983
No 104
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=90.11 E-value=4.1 Score=40.38 Aligned_cols=140 Identities=15% Similarity=0.139 Sum_probs=70.7
Q ss_pred EecCCcEEEEeCc-eEEEEeCCCCe--EEEEccCCCCCCCccCCC-ceEeeccCCCCCCCCCCCCcEEEEecCccCCccc
Q 042680 200 LLPDGNVYVFANN-RSVVHDPKANK--IIREFPQLPGGARSYPAT-GTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLY 275 (530)
Q Consensus 200 llp~G~lfv~Gg~-~~e~yDp~tn~--w~~~~p~mp~~~r~yp~~-g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 275 (530)
++.+|+||+.... ...+||.++++ |...++.-.......... ...... .+++||+... +
T Consensus 50 ~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~v~v~~~-~----- 112 (376)
T 3q7m_A 50 ALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-----------SGGHVYIGSE-K----- 112 (376)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-----------ETTEEEEEET-T-----
T ss_pred EEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-----------eCCEEEEEcC-C-----
Confidence 3458999998754 78899998875 553332100000000000 111111 2677776432 1
Q ss_pred cccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 276 LGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 276 ~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
..+.++|+.+....|+.. .-. .... .++.+|+||+..... ....||+++
T Consensus 113 ------------g~l~a~d~~tG~~~W~~~~~~~---~~~~-p~~~~~~v~v~~~~g--------------~l~~~d~~t 162 (376)
T 3q7m_A 113 ------------AQVYALNTSDGTVAWQTKVAGE---ALSR-PVVSDGLVLIHTSNG--------------QLQALNEAD 162 (376)
T ss_dssp ------------SEEEEEETTTCCEEEEEECSSC---CCSC-CEEETTEEEEECTTS--------------EEEEEETTT
T ss_pred ------------CEEEEEECCCCCEEEEEeCCCc---eEcC-CEEECCEEEEEcCCC--------------eEEEEECCC
Confidence 135678887655678765 211 1222 234588888744311 467899976
Q ss_pred CCCCceEEecCCCC--CCcccccceecCCCeEEEcCC
Q 042680 355 PEGQRFAELAPTDI--PRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 355 ~~g~~Wt~la~~~~--~R~yHS~a~LLpdGrVlv~GG 389 (530)
. ...|+.-..... .|...+. +..+|+||+...
T Consensus 163 G-~~~W~~~~~~~~~~~~~~~~~--~~~~~~v~~g~~ 196 (376)
T 3q7m_A 163 G-AVKWTVNLDMPSLSLRGESAP--TTAFGAAVVGGD 196 (376)
T ss_dssp C-CEEEEEECCC-----CCCCCC--EEETTEEEECCT
T ss_pred C-cEEEEEeCCCCceeecCCCCc--EEECCEEEEEcC
Confidence 6 124875433222 1222222 233888888653
No 105
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=89.89 E-value=9.2 Score=37.31 Aligned_cols=143 Identities=13% Similarity=0.131 Sum_probs=74.2
Q ss_pred ec-CCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 201 LP-DGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 201 lp-~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
.+ ++++++.|+ ....+||..+++....+. .+. .. ......|.. .++.++++|+.+
T Consensus 108 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~--~~----~~~~~~~~~--------~~~~~~~~~~~~------- 165 (408)
T 4a11_B 108 YPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEE--TV----YSHHMSPVS--------TKHCLVAVGTRG------- 165 (408)
T ss_dssp CTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSS--CE----EEEEECSSC--------SSCCEEEEEESS-------
T ss_pred ccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCC--ce----eeeEeecCC--------CCCcEEEEEcCC-------
Confidence 45 777888876 468899999988764442 221 11 112223321 256688887754
Q ss_pred cccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCe-EEEEcCCCCCCCCcccCCCCCcccEEecCCCCC
Q 042680 278 EEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGE-VLIINGADLGSGGWHCADKPSLKPMLYRPNAPE 356 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~-VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~ 356 (530)
..+..+|+......... .-... ...+....|+|+ ++++|+.+ | .+.+||..+..
T Consensus 166 ----------~~v~~~d~~~~~~~~~~-~~~~~-~v~~~~~~~~~~~ll~~~~~d-g------------~i~i~d~~~~~ 220 (408)
T 4a11_B 166 ----------PKVQLCDLKSGSCSHIL-QGHRQ-EILAVSWSPRYDYILATASAD-S------------RVKLWDVRRAS 220 (408)
T ss_dssp ----------SSEEEEESSSSCCCEEE-CCCCS-CEEEEEECSSCTTEEEEEETT-S------------CEEEEETTCSS
T ss_pred ----------CeEEEEeCCCcceeeee-cCCCC-cEEEEEECCCCCcEEEEEcCC-C------------cEEEEECCCCC
Confidence 13566777532111111 11111 122344568888 78888764 1 46788887652
Q ss_pred CCceEEecC--------CCCCCcccc----cceecCCCeEEEcCCCC
Q 042680 357 GQRFAELAP--------TDIPRMYHS----VANLLPDGKVFVGGSND 391 (530)
Q Consensus 357 g~~Wt~la~--------~~~~R~yHS----~a~LLpdGrVlv~GG~~ 391 (530)
... ..+.. .......|. .....|||+.+++|+..
T Consensus 221 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 221 GCL-ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp CCS-EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccc-ccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCC
Confidence 111 11100 000001122 23456899999988853
No 106
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.70 E-value=14 Score=35.01 Aligned_cols=64 Identities=14% Similarity=0.065 Sum_probs=33.9
Q ss_pred EEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEe--cCCCCCCCceEEecCC
Q 042680 290 CARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLY--RPNAPEGQRFAELAPT 366 (530)
Q Consensus 290 ~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiY--DP~t~~g~~Wt~la~~ 366 (530)
+.+||+...+.+++.. ..+....-.+...-|||+.+++++... ..+.+| |+++. +++.+...
T Consensus 255 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------------~~v~v~~~d~~~g---~~~~~~~~ 319 (343)
T 1ri6_A 255 ITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKS------------HHISVYEIVGEQG---LLHEKGRY 319 (343)
T ss_dssp EEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTT------------CEEEEEEEETTTT---EEEEEEEE
T ss_pred EEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCC------------CeEEEEEEcCCCc---eeeEcccc
Confidence 5667765323344443 222211223445568998666555321 145677 77777 77766554
Q ss_pred CC
Q 042680 367 DI 368 (530)
Q Consensus 367 ~~ 368 (530)
+.
T Consensus 320 ~~ 321 (343)
T 1ri6_A 320 AV 321 (343)
T ss_dssp EC
T ss_pred cc
Confidence 44
No 107
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=89.57 E-value=17 Score=36.65 Aligned_cols=170 Identities=12% Similarity=0.095 Sum_probs=84.8
Q ss_pred CCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEeCc--eE
Q 042680 138 DGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN--RS 214 (530)
Q Consensus 138 dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~--~~ 214 (530)
||+.++.|+.++ ++.+| ..++ +....+. . ..-+...+..+++.++.|+. ..
T Consensus 182 ~~~~l~sg~~dg-~i~vwd~~~~---~~~~~~~---~-------------------h~~~v~~l~~~~~~l~s~s~dg~i 235 (435)
T 1p22_A 182 DERVIITGSSDS-TVRVWDVNTG---EMLNTLI---H-------------------HCEAVLHLRFNNGMMVTCSKDRSI 235 (435)
T ss_dssp CSSEEEEEETTS-CEEEEESSSC---CEEEEEC---C-------------------CCSCEEEEECCTTEEEEEETTSCE
T ss_pred CCCEEEEEcCCC-eEEEEECCCC---cEEEEEc---C-------------------CCCcEEEEEEcCCEEEEeeCCCcE
Confidence 889999998764 57777 5443 1111111 0 00122334446777777763 67
Q ss_pred EEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEE
Q 042680 215 VVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMV 294 (530)
Q Consensus 215 e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d 294 (530)
.+||..+++-......+.+ . . +....+. .+++.+++|+.+ ..+..+|
T Consensus 236 ~vwd~~~~~~~~~~~~~~~-~-~----~~v~~~~----------~~~~~l~s~~~d-----------------g~i~vwd 282 (435)
T 1p22_A 236 AVWDMASPTDITLRRVLVG-H-R----AAVNVVD----------FDDKYIVSASGD-----------------RTIKVWN 282 (435)
T ss_dssp EEEECSSSSCCEEEEEECC-C-S----SCEEEEE----------EETTEEEEEETT-----------------SEEEEEE
T ss_pred EEEeCCCCCCceeeeEecC-C-C----CcEEEEE----------eCCCEEEEEeCC-----------------CeEEEEE
Confidence 8999987653211111111 0 1 1111111 256677777654 1345677
Q ss_pred cCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCce-EEecCCCCCCccc
Q 042680 295 VTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRF-AELAPTDIPRMYH 373 (530)
Q Consensus 295 p~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~W-t~la~~~~~R~yH 373 (530)
+.. .+-.. .+.........+. .+++.+++|+.+ | .+.+||..+. +- ..+.... .
T Consensus 283 ~~~--~~~~~-~~~~~~~~v~~~~-~~~~~l~~g~~d-g------------~i~iwd~~~~---~~~~~~~~h~-----~ 337 (435)
T 1p22_A 283 TST--CEFVR-TLNGHKRGIACLQ-YRDRLVVSGSSD-N------------TIRLWDIECG---ACLRVLEGHE-----E 337 (435)
T ss_dssp TTT--CCEEE-EEECCSSCEEEEE-EETTEEEEEETT-S------------CEEEEETTTC---CEEEEECCCS-----S
T ss_pred CCc--CcEEE-EEcCCCCcEEEEE-eCCCEEEEEeCC-C------------eEEEEECCCC---CEEEEEeCCc-----C
Confidence 653 21111 1111111222343 378888888865 1 5789999876 32 2221110 1
Q ss_pred ccceecCCCeEEEcCCCC
Q 042680 374 SVANLLPDGKVFVGGSND 391 (530)
Q Consensus 374 S~a~LLpdGrVlv~GG~~ 391 (530)
.+..+-.|++.+++|+..
T Consensus 338 ~v~~~~~~~~~l~sg~~d 355 (435)
T 1p22_A 338 LVRCIRFDNKRIVSGAYD 355 (435)
T ss_dssp CEEEEECCSSEEEEEETT
T ss_pred cEEEEEecCCEEEEEeCC
Confidence 122233489999998853
No 108
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=89.54 E-value=1.9 Score=43.90 Aligned_cols=137 Identities=15% Similarity=0.173 Sum_probs=76.2
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...|+|++++.|+. .+.+||..+++..+.+. +. .. + -.++-+ . .+++++++|+.+ +
T Consensus 115 ~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~---~h-~~-~--V~~v~~--~--------~~~~~l~sgs~D-~---- 172 (410)
T 1vyh_C 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLK---GH-TD-S--VQDISF--D--------HSGKLLASCSAD-M---- 172 (410)
T ss_dssp EECSSSSEEEEEESSSCEEEEETTTCCCCEEEC---CC-SS-C--EEEEEE--C--------TTSSEEEEEETT-S----
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe---cc-CC-c--EEEEEE--c--------CCCCEEEEEeCC-C----
Confidence 34578999999874 68899999886543332 11 11 1 011211 1 267888888865 1
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-CCCC-ccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPA-PRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~-~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
++..+|+.. .+.. .+.. ...-.+....|+|+.++.|+.+. ++.+||..+
T Consensus 173 ------------~i~iwd~~~----~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~-------------~i~~wd~~~ 223 (410)
T 1vyh_C 173 ------------TIKLWDFQG----FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDK-------------TIKMWEVQT 223 (410)
T ss_dssp ------------CCCEEETTS----SCEEECCCCCSSCEEEEEECSSSSEEEEEETTS-------------EEEEEETTT
T ss_pred ------------eEEEEeCCC----CceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCC-------------eEEEEECCC
Confidence 234466542 1221 2211 11122334568999999988651 578999887
Q ss_pred CCCCce-EEecCCCCCCcccccceecCCCeEEEcCCCCC
Q 042680 355 PEGQRF-AELAPTDIPRMYHSVANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 355 ~~g~~W-t~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~ 392 (530)
. +- ..+... +..-.....-+||+++++|+...
T Consensus 224 ~---~~~~~~~~h---~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 224 G---YCVKTFTGH---REWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp C---CEEEEEECC---SSCEEEEEECTTSSEEEEEETTS
T ss_pred C---cEEEEEeCC---CccEEEEEECCCCCEEEEEcCCC
Confidence 6 32 222111 11111233558999999998654
No 109
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=89.44 E-value=2.3 Score=40.92 Aligned_cols=28 Identities=14% Similarity=0.191 Sum_probs=21.3
Q ss_pred ecCCcEEEEeC--ceEEEEeCCCCeEEEEc
Q 042680 201 LPDGNVYVFAN--NRSVVHDPKANKIIREF 228 (530)
Q Consensus 201 lp~G~lfv~Gg--~~~e~yDp~tn~w~~~~ 228 (530)
.+++++|+.++ ....+||..+++..+.+
T Consensus 8 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~ 37 (349)
T 1jmx_B 8 KAGHEYMIVTNYPNNLHVVDVASDTVYKSC 37 (349)
T ss_dssp CTTCEEEEEEETTTEEEEEETTTTEEEEEE
T ss_pred cCCCEEEEEeCCCCeEEEEECCCCcEEEEE
Confidence 35788888764 57889999999876544
No 110
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=89.29 E-value=8 Score=36.71 Aligned_cols=30 Identities=10% Similarity=-0.004 Sum_probs=22.4
Q ss_pred ceEE-EecCCcEEEEeC--ceEEEEeCCCCeEE
Q 042680 196 PFVY-LLPDGNVYVFAN--NRSVVHDPKANKII 225 (530)
Q Consensus 196 p~~~-llp~G~lfv~Gg--~~~e~yDp~tn~w~ 225 (530)
|... .-++|+||+... ....+||+++++..
T Consensus 71 ~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 71 QNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp EEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred cceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 4433 347999998863 57899999888876
No 111
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.06 E-value=20 Score=36.67 Aligned_cols=141 Identities=9% Similarity=0.060 Sum_probs=74.5
Q ss_pred cceEEEe-cCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccC
Q 042680 195 YPFVYLL-PDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVR 271 (530)
Q Consensus 195 Yp~~~ll-p~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~ 271 (530)
.|+..++ ++|+||+... ....+||+.+++....... . ..|+ .+ + .+ ....+|++....
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~----~~~~--ia-~---~~-------~g~~l~~~d~~~- 192 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-F----KGGK--PA-V---TK-------DKQRVYSIGWEG- 192 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-C----CBCB--CE-E---CT-------TSSEEEEEBSST-
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-C----CCCc--ee-E---ec-------CCCcEEEEecCC-
Confidence 4655444 7999999864 6789999999887632221 1 1221 11 1 11 134566654321
Q ss_pred CccccccccccccccCCcEEEEEcCCCCCcce--ec-CC-C-Cccccceeeeec-CCeEEEEcCCCCCCCCcccCCCCCc
Q 042680 272 EGLYLGEEEKRFVNALDDCARMVVTSPNPEWK--IE-KM-P-APRTMADGVLLP-NGEVLIINGADLGSGGWHCADKPSL 345 (530)
Q Consensus 272 ~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~--~~-~M-~-~~R~~~~~vvLp-dG~VlViGG~~~g~~g~~~~~~p~~ 345 (530)
...+.++++. ..|. .. .. + ......+.++-| +|+||+... . .
T Consensus 193 ---------------~~~I~~~d~~---~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~-------------~ 240 (409)
T 3hrp_A 193 ---------------THTVYVYMKA---SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-N-------------K 240 (409)
T ss_dssp ---------------TCEEEEEEGG---GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-T-------------C
T ss_pred ---------------CceEEEEEcC---CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-C-------------C
Confidence 0145667765 2333 11 11 1 222334555667 899999433 1 1
Q ss_pred ccEEecCCCCCCCceEEecC---CCCCCcc--cccceecC-CCeEEEcCCC
Q 042680 346 KPMLYRPNAPEGQRFAELAP---TDIPRMY--HSVANLLP-DGKVFVGGSN 390 (530)
Q Consensus 346 ~~eiYDP~t~~g~~Wt~la~---~~~~R~y--HS~a~LLp-dGrVlv~GG~ 390 (530)
.+.+||+++. ..+.++. ....+.. ++.+ +-| +|++|++-..
T Consensus 241 ~I~~~d~~~~---~~~~~~~~~~~g~~~~~P~~~ia-~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 241 NFGRFNVKTQ---EVTLIKQLELSGSLGTNPGPYLI-YYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEEETTTC---CEEEEEECCCCSCCCCSSCCEEE-EETTTTEEEEEETT
T ss_pred cEEEEECCCC---CEEEEecccccCCCCCCccccEE-EeCCCCEEEEEeCC
Confidence 5788999877 5444311 1111111 1333 447 6999998653
No 112
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=89.06 E-value=12 Score=37.92 Aligned_cols=171 Identities=15% Similarity=0.158 Sum_probs=90.3
Q ss_pred cCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEeCc--e
Q 042680 137 SDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN--R 213 (530)
Q Consensus 137 ~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~--~ 213 (530)
.||+.++.|+.++ ++.+| ..+. +....+. . + .-+...+..+|++++.|+. .
T Consensus 141 ~d~~~l~~g~~dg-~i~iwd~~~~---~~~~~~~---~---------h----------~~~v~~l~~~~~~l~sg~~dg~ 194 (435)
T 1p22_A 141 YDDQKIVSGLRDN-TIKIWDKNTL---ECKRILT---G---------H----------TGSVLCLQYDERVIITGSSDST 194 (435)
T ss_dssp CCSSEEEEEESSS-CEEEEESSSC---CEEEEEC---C---------C----------SSCEEEEECCSSEEEEEETTSC
T ss_pred ECCCEEEEEeCCC-eEEEEeCCCC---eEEEEEc---C---------C----------CCcEEEEEECCCEEEEEcCCCe
Confidence 3889999998764 57777 4432 1111111 0 0 0122334459999998874 6
Q ss_pred EEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEE
Q 042680 214 SVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARM 293 (530)
Q Consensus 214 ~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~ 293 (530)
..+||..+++....+.. . . +...-+. ..+..+++|+.+ ..+..+
T Consensus 195 i~vwd~~~~~~~~~~~~---h--~----~~v~~l~----------~~~~~l~s~s~d-----------------g~i~vw 238 (435)
T 1p22_A 195 VRVWDVNTGEMLNTLIH---H--C----EAVLHLR----------FNNGMMVTCSKD-----------------RSIAVW 238 (435)
T ss_dssp EEEEESSSCCEEEEECC---C--C----SCEEEEE----------CCTTEEEEEETT-----------------SCEEEE
T ss_pred EEEEECCCCcEEEEEcC---C--C----CcEEEEE----------EcCCEEEEeeCC-----------------CcEEEE
Confidence 88999999876644421 1 1 1111111 244567777654 135567
Q ss_pred EcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceE-EecCCCCCCcc
Q 042680 294 VVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFA-ELAPTDIPRMY 372 (530)
Q Consensus 294 dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt-~la~~~~~R~y 372 (530)
|............+.........+.. +|+.+++|+.+ | .+.+||..+. +-. .+....
T Consensus 239 d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~d-g------------~i~vwd~~~~---~~~~~~~~~~----- 296 (435)
T 1p22_A 239 DMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGD-R------------TIKVWNTSTC---EFVRTLNGHK----- 296 (435)
T ss_dssp ECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEEETT-S------------EEEEEETTTC---CEEEEEECCS-----
T ss_pred eCCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEEeCC-C------------eEEEEECCcC---cEEEEEcCCC-----
Confidence 76542211111111111222333444 88888888765 1 5789998876 432 221110
Q ss_pred cccceecCCCeEEEcCCCC
Q 042680 373 HSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 373 HS~a~LLpdGrVlv~GG~~ 391 (530)
..+..+-.+++.+++|+..
T Consensus 297 ~~v~~~~~~~~~l~~g~~d 315 (435)
T 1p22_A 297 RGIACLQYRDRLVVSGSSD 315 (435)
T ss_dssp SCEEEEEEETTEEEEEETT
T ss_pred CcEEEEEeCCCEEEEEeCC
Confidence 1122333478888888754
No 113
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=89.05 E-value=6.5 Score=42.42 Aligned_cols=180 Identities=18% Similarity=0.221 Sum_probs=88.0
Q ss_pred CCCCCcceec----CCCCccccceeeee-c-------CCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEe
Q 042680 296 TSPNPEWKIE----KMPAPRTMADGVLL-P-------NGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAEL 363 (530)
Q Consensus 296 ~~~~~~W~~~----~M~~~R~~~~~vvL-p-------dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~l 363 (530)
.|...+|+.. .++.+.+.++.+.+ | ++++++++...... .+. ...+|= ..+.|++|+..
T Consensus 244 ~DgG~tW~~~~~~~~l~~p~~~~s~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~R~---~~~l~~-S~D~G~tW~~~ 314 (601)
T 1w8o_A 244 TDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQT-----SRS---QGTIRM-SCDDGQTWPVS 314 (601)
T ss_dssp SSTTSCCCCCEEEEEEECSSCCCEEEESSTTCCTTCSGGGCEEEEEECCSS-----SSE---EEEEEE-ESSTTSCCCEE
T ss_pred cCCCCCCCCCeecCcCCCCCccceEEEecccccCCCCCCCEEEEECCCCCC-----ccc---ceEEEE-eCCCCCCCCCc
Confidence 4445789763 35666665554433 2 45555555322100 000 111221 23557799864
Q ss_pred cCCCCCCcccccceecCCCeEEEcCCCCCCCCccccCCCCcceEEEEcCCCCCCcccCCCCceeccCCCCccccCCEEEE
Q 042680 364 APTDIPRMYHSVANLLPDGKVFVGGSNDNDGYFEFAKFPTELRLEKFTPPYLAPEYAALRPAILEDQSDKAATYGKWVYL 443 (530)
Q Consensus 364 a~~~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~~~~~t~~~vE~y~Ppyl~~~~~~~RP~i~~~~~p~~~~~g~~~~v 443 (530)
..+.......+..+.++||+|+++.-.. ...+...|....|... .-| . ... +.++..|++++|
T Consensus 315 ~~l~~~~~~Y~~l~~~~dg~i~~~ye~~-----------~~i~~~~~~~~~l~~~---~~~-~-~~~-~~~~~~g~~~~~ 377 (601)
T 1w8o_A 315 KVFQPGSMSYSTLTALPDGTYGLLYEPG-----------TGIRYANFNLAWLGGI---CAP-F-TIP-DVALEPGQQVTV 377 (601)
T ss_dssp EEEEEEECCCEEEEECTTSCEEEEECCS-----------SEEEEEEECHHHHTBC---SCC-E-ECC-CEEECTTCEEEE
T ss_pred eEeCCCCCCCCeEEEcCCCeEEEEEecC-----------CcceEEEecHHHhccc---cCC-C-cCc-cceecCCceeEE
Confidence 3222222333445567999999885321 1345567777777543 122 2 221 455788888777
Q ss_pred EEEcCCC--CccceEEEEEEcCCccccCCCCCcceEEeeeeeeecccCCC-ceEEEEEcCCCCCcCCCcceEEEE
Q 042680 444 RVKSSEP--LTINYVQVSIVAPPFVTHGISMNQRMLFLSVIELKNNVAPG-VDEVVVAAPPTSALAPPGYYLLSV 515 (530)
Q Consensus 444 ~~~~~~~--~~~~~~~v~l~~~~~~THs~n~~QR~v~L~~~~~~~~~~~g-~~~~~v~~P~~~~v~ppG~ymlfv 515 (530)
++..... ......+++|..+...|= +- .+... ..+.+ ...++|++|.. +.+|.|+|=+
T Consensus 378 ~~~vtn~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~----~~g~~~t~~~~vt~~~~---~~~g~y~l~~ 438 (601)
T 1w8o_A 378 PVAVTNQSGIAVPKPSLQLDASPDWQV------QG-SVEPL----MPGRQAKGQVTITVPAG---TTPGRYRVGA 438 (601)
T ss_dssp EEEEECCSSSCBSSCEEEEECCTTSEE------EE-EECCB----CTTCEEEEEEEEECCTT---CCCEEEEEEE
T ss_pred EEEEECCCceeccCceEEEecCCCcEE------ec-ccccc----CCCCceEEEEEEecCCC---CCCCcEEeeE
Confidence 7664331 112235677665443321 11 11110 11111 12347777764 4589998743
No 114
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=89.03 E-value=21 Score=36.16 Aligned_cols=208 Identities=14% Similarity=0.087 Sum_probs=104.3
Q ss_pred eeEEEEeCCCCcEEEccccCCcccccceeccCCcEEEccCCeEEEeccCCC--CcEEEE-cCCCCCCCceEEeccccccc
Q 042680 99 CHSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDA--FSYEYV-PVEKESNKAAIAFPFLFETQ 175 (530)
Q Consensus 99 a~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~--~s~E~y-P~~~~~~~~~~~~p~l~~t~ 175 (530)
....++|......+.+..-... ..+.+ --+||+.++.++.+. ..+.+| ..++ ....+. ..
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~-v~~~~--------~Spdg~~la~~s~~~~~~~i~~~d~~tg----~~~~l~---~~- 221 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQP-LMSPA--------WSPDGSKLAYVTFESGRSALVIQTLANG----AVRQVA---SF- 221 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSC-EEEEE--------ECTTSSEEEEEECTTSSCEEEEEETTTC----CEEEEE---CC-
T ss_pred ceEEEEcCCCCCCEEEeCCCCc-ceeeE--------EcCCCCEEEEEEecCCCcEEEEEECCCC----cEEEee---cC-
Confidence 3556778766555555322211 11122 245888777777654 466677 4443 111110 00
Q ss_pred cccCCCCCCCccccccCCccceEEEecCCcEEE-EeC----ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCC
Q 042680 176 DFLERPGNPKGRFRLENNLYPFVYLLPDGNVYV-FAN----NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLY 250 (530)
Q Consensus 176 d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv-~Gg----~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~ 250 (530)
. ...-.....|||+.++ .+. ....+||..+++.. .+..-. .. -.++.. .
T Consensus 222 --------~--------~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~~~----~~---~~~~~~--s 275 (415)
T 2hqs_A 222 --------P--------RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDGR----SN---NTEPTW--F 275 (415)
T ss_dssp --------S--------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCCCS----SC---EEEEEE--C
T ss_pred --------C--------CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCcCCC----Cc---ccceEE--C
Confidence 0 0001234468998555 442 35788899988765 443211 10 111111 1
Q ss_pred CCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCC
Q 042680 251 LPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGA 330 (530)
Q Consensus 251 ~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~ 330 (530)
.+++.+++++...+ ...+.++|+.. .+-...... .........-|||+.+++++.
T Consensus 276 --------pdg~~l~~~s~~~g--------------~~~i~~~d~~~--~~~~~l~~~-~~~~~~~~~spdG~~l~~~~~ 330 (415)
T 2hqs_A 276 --------PDSQNLAFTSDQAG--------------RPQVYKVNING--GAPQRITWE-GSQNQDADVSSDGKFMVMVSS 330 (415)
T ss_dssp --------TTSSEEEEEECTTS--------------SCEEEEEETTS--SCCEECCCS-SSEEEEEEECTTSSEEEEEEE
T ss_pred --------CCCCEEEEEECCCC--------------CcEEEEEECCC--CCEEEEecC-CCcccCeEECCCCCEEEEEEC
Confidence 15665555443211 12456667653 222211111 122223345599998887764
Q ss_pred CCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 331 DLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 331 ~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
..| ...+.+||..+. +...+.... .......-|||+.++.++..
T Consensus 331 ~~g----------~~~i~~~d~~~~---~~~~l~~~~----~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 331 NGG----------QQHIAKQDLATG---GVQVLSSTF----LDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp CSS----------CEEEEEEETTTC---CEEECCCSS----SCEEEEECTTSSEEEEEEEE
T ss_pred cCC----------ceEEEEEECCCC---CEEEecCCC----CcCCeEEcCCCCEEEEEEcC
Confidence 321 236789999887 766554322 22234456999988887743
No 115
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=89.01 E-value=4.9 Score=40.32 Aligned_cols=139 Identities=14% Similarity=0.198 Sum_probs=75.2
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...+||+.++.|+. ...+||..+++....+. +. ..+.. +.... .+++.+++|+.+
T Consensus 130 ~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~---~h--~~~v~-~~~~~-----------p~~~~l~s~s~d------ 186 (393)
T 1erj_A 130 CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ---GH--EQDIY-SLDYF-----------PSGDKLVSGSGD------ 186 (393)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---CC--SSCEE-EEEEC-----------TTSSEEEEEETT------
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc---cC--CCCEE-EEEEc-----------CCCCEEEEecCC------
Confidence 34579999998874 68899999988664332 11 11111 11121 256777777754
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeec-CCeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLP-NGEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLp-dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
.++..+|+.. .+.... .... ........| ||+++++|+.+. ++.+||..+
T Consensus 187 -----------~~v~iwd~~~--~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~s~d~-------------~v~iwd~~~ 238 (393)
T 1erj_A 187 -----------RTVRIWDLRT--GQCSLTLSIED--GVTTVAVSPGDGKYIAAGSLDR-------------AVRVWDSET 238 (393)
T ss_dssp -----------SEEEEEETTT--TEEEEEEECSS--CEEEEEECSTTCCEEEEEETTS-------------CEEEEETTT
T ss_pred -----------CcEEEEECCC--CeeEEEEEcCC--CcEEEEEECCCCCEEEEEcCCC-------------cEEEEECCC
Confidence 1345566653 222211 1111 122233446 899999998651 578999887
Q ss_pred CCCCceE-EecCCCCCCcccc----cceecCCCeEEEcCCCC
Q 042680 355 PEGQRFA-ELAPTDIPRMYHS----VANLLPDGKVFVGGSND 391 (530)
Q Consensus 355 ~~g~~Wt-~la~~~~~R~yHS----~a~LLpdGrVlv~GG~~ 391 (530)
. +-. .+.........|. .....|||+.++.|+..
T Consensus 239 ~---~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d 277 (393)
T 1erj_A 239 G---FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 277 (393)
T ss_dssp C---CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred C---cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 6 432 2211111111232 23356899999998853
No 116
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=88.94 E-value=16 Score=34.54 Aligned_cols=56 Identities=13% Similarity=0.191 Sum_probs=31.3
Q ss_pred eeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCce-EEecCCCCCCcccccceecCCCe-EEEcCCC
Q 042680 316 GVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRF-AELAPTDIPRMYHSVANLLPDGK-VFVGGSN 390 (530)
Q Consensus 316 ~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~W-t~la~~~~~R~yHS~a~LLpdGr-Vlv~GG~ 390 (530)
.+.-++|++||..... ..+.+|||++. +. ..+. .+. ..-++.+ +-+||+ +||+...
T Consensus 231 i~~d~~G~l~v~~~~~-------------~~i~~~d~~~g---~~~~~~~-~~~-~~~~~i~-~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 231 MDFDEDNNLLVANWGS-------------SHIEVFGPDGG---QPKMRIR-CPF-EKPSNLH-FKPQTKTIFVTEHE 288 (314)
T ss_dssp EEEBTTCCEEEEEETT-------------TEEEEECTTCB---SCSEEEE-CSS-SCEEEEE-ECTTSSEEEEEETT
T ss_pred eEECCCCCEEEEEcCC-------------CEEEEEcCCCC---cEeEEEe-CCC-CCceeEE-ECCCCCEEEEEeCC
Confidence 3445799999975322 14678999854 32 2221 111 2222333 358998 8877653
No 117
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=88.71 E-value=6.4 Score=37.66 Aligned_cols=23 Identities=4% Similarity=0.159 Sum_probs=18.1
Q ss_pred CCcEEEEeC--ceEEEEeCCCCeEE
Q 042680 203 DGNVYVFAN--NRSVVHDPKANKII 225 (530)
Q Consensus 203 ~G~lfv~Gg--~~~e~yDp~tn~w~ 225 (530)
+|++++.|+ ..+.+||..+++|.
T Consensus 66 ~g~~l~s~s~D~~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 66 FGTILASCSYDGKVMIWKEENGRWS 90 (297)
T ss_dssp GCSEEEEEETTTEEEEEEBSSSCBC
T ss_pred cCCEEEEEcCCCEEEEEEcCCCceE
Confidence 488998887 46889999887654
No 118
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=88.69 E-value=18 Score=35.07 Aligned_cols=226 Identities=17% Similarity=0.247 Sum_probs=108.7
Q ss_pred eeEEEEeCCCCcEEEccccCCcccccceeccCCcEEEccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccc
Q 042680 99 CHSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDF 177 (530)
Q Consensus 99 a~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~ 177 (530)
.....+|+.+++..............+.. .-+||++||....+ ..+..| +... ......+.-...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia-------~d~~g~l~v~d~~~-~~v~~~~~~g~--~~~~~~~~~~~~---- 134 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLS-------IDTDGNYWVTDVAL-HQVFKLDPHSK--EGPLLILGRSMQ---- 134 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEE-------ECTTSCEEEEETTT-TEEEEECTTCS--SCCSEEESBTTB----
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEE-------ECCCCCEEEEECCC-CEEEEEeCCCC--eEEEEEecccCC----
Confidence 35789999888765432111101111221 24588988876543 456677 5321 001111110000
Q ss_pred cCCCCCCCccccccCCccceEE-Eec-CCcEEEEeC---ceEEEEeCCCCeEEEEccCCCC------CCCccCCCceEee
Q 042680 178 LERPGNPKGRFRLENNLYPFVY-LLP-DGNVYVFAN---NRSVVHDPKANKIIREFPQLPG------GARSYPATGTSVL 246 (530)
Q Consensus 178 ~~~~~~~~~~~~~~~~~Yp~~~-llp-~G~lfv~Gg---~~~e~yDp~tn~w~~~~p~mp~------~~r~yp~~g~svm 246 (530)
++..... -.+|... +.+ +|+||+..+ ....+||+.... .+.+..-.. ....+|. +.++
T Consensus 135 ---~g~~~~~-----~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~-~~~~~~~g~~~~~~~~~~~~p~-gia~- 203 (329)
T 3fvz_A 135 ---PGSDQNH-----FCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKF-VTQWGEESSGSSPRPGQFSVPH-SLAL- 203 (329)
T ss_dssp ---CCCSTTC-----CSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCE-EEEECEECCSSSCCTTEESCEE-EEEE-
T ss_pred ---CCCCccc-----cCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCE-EEEeccCCCCCCCCCcccCCCc-EEEE-
Confidence 0000111 1246544 446 899999973 468899965543 324421110 0112231 2221
Q ss_pred ccCCCCCCCCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCC--CccccceeeeecCCe
Q 042680 247 LPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMP--APRTMADGVLLPNGE 323 (530)
Q Consensus 247 lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~--~~R~~~~~vvLpdG~ 323 (530)
-| ..+.|||+...+ ..+.+||+.+ .+.... ..+ ..+.+ +...-| |.
T Consensus 204 d~----------~~g~l~v~d~~~-----------------~~I~~~~~~~--G~~~~~~~~~~~~~~~~-~~~~~p-g~ 252 (329)
T 3fvz_A 204 VP----------HLDQLCVADREN-----------------GRIQCFKTDT--KEFVREIKHASFGRNVF-AISYIP-GF 252 (329)
T ss_dssp ET----------TTTEEEEEETTT-----------------TEEEEEETTT--CCEEEEECCTTTTTCEE-EEEEET-TE
T ss_pred EC----------CCCEEEEEECCC-----------------CEEEEEECCC--CcEEEEEeccccCCCcc-eeeecC-CE
Confidence 11 148999986432 2467788752 343322 211 11222 223345 88
Q ss_pred EEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEE-ecCCC-CCCcccccceecCCCeEEEcCCC
Q 042680 324 VLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAE-LAPTD-IPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 324 VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~-la~~~-~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
+++..|... .+ +....++.+||+.+. +... +.+.. ....-++. ++-+||.|||+...
T Consensus 253 ~~~~~g~~~-v~-----~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~p~~i-a~~~dG~lyvad~~ 311 (329)
T 3fvz_A 253 LFAVNGKPY-FG-----DQEPVQGFVMNFSSG---EIIDVFKPVRKHFDMPHDI-VASEDGTVYIGDAH 311 (329)
T ss_dssp EEEEECCCC-TT-----CSCCCCEEEEETTTC---CEEEEECCSSSCCSSEEEE-EECTTSEEEEEESS
T ss_pred EEEeCCCEE-ec-----cCCCcEEEEEEcCCC---eEEEEEcCCCCccCCeeEE-EECCCCCEEEEECC
Confidence 888887531 11 112336789998877 5543 32211 11222343 35689999999764
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=88.62 E-value=6.6 Score=38.32 Aligned_cols=139 Identities=12% Similarity=0.117 Sum_probs=74.8
Q ss_pred Eec--CCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccc
Q 042680 200 LLP--DGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLY 275 (530)
Q Consensus 200 llp--~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 275 (530)
..| +|++++.|+. ...+||..+++..+... .. ...+.. ..... .+++++++|+.+
T Consensus 133 ~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~-~~---~~~~i~-~~~~~-----------pdg~~lasg~~d----- 191 (343)
T 3lrv_A 133 GHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS-AK---SDVEYS-SGVLH-----------KDSLLLALYSPD----- 191 (343)
T ss_dssp CCC---CCEEEEEETTCCEEEEESSSSCEEEEEC-CC---SSCCCC-EEEEC-----------TTSCEEEEECTT-----
T ss_pred cCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe-cC---CCCceE-EEEEC-----------CCCCEEEEEcCC-----
Confidence 346 8899988874 67899999987653221 11 111111 22222 268899998864
Q ss_pred cccccccccccCCcEEEEEcCCCCCcce-ec-CC-CCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecC
Q 042680 276 LGEEEKRFVNALDDCARMVVTSPNPEWK-IE-KM-PAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRP 352 (530)
Q Consensus 276 ~~~~~~~~~~a~~s~~~~dp~~~~~~W~-~~-~M-~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP 352 (530)
..+..+|... .+-. .. .. .... -.+...-|||+.++.++.. ++.+||.
T Consensus 192 ------------g~i~iwd~~~--~~~~~~~~~~~h~~~-v~~l~fs~~g~~l~s~~~~--------------~v~iwd~ 242 (343)
T 3lrv_A 192 ------------GILDVYNLSS--PDQASSRFPVDEEAK-IKEVKFADNGYWMVVECDQ--------------TVVCFDL 242 (343)
T ss_dssp ------------SCEEEEESSC--TTSCCEECCCCTTSC-EEEEEECTTSSEEEEEESS--------------BEEEEET
T ss_pred ------------CEEEEEECCC--CCCCccEEeccCCCC-EEEEEEeCCCCEEEEEeCC--------------eEEEEEc
Confidence 2356788764 2222 11 22 2222 2233445899999988732 5789998
Q ss_pred CCCCCCceEEecCCCCCCccc--ccceecCCCeEEEcCCC
Q 042680 353 NAPEGQRFAELAPTDIPRMYH--SVANLLPDGKVFVGGSN 390 (530)
Q Consensus 353 ~t~~g~~Wt~la~~~~~R~yH--S~a~LLpdGrVlv~GG~ 390 (530)
.+... ...+.......... .....-|||+.+++|+.
T Consensus 243 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 243 RKDVG--TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp TSSTT--CBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CCCCc--ceeecccccccccccceEEEECCCCCEEEEecC
Confidence 77611 11122111111111 12456689999999654
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=88.60 E-value=21 Score=35.91 Aligned_cols=135 Identities=16% Similarity=0.160 Sum_probs=70.8
Q ss_pred EecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 200 LLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 200 llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
+..+|+.++.|+ ....+||..+++....+.. . ..+ -.++. .+++.+++|+.+
T Consensus 245 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~--~~~--v~~~~------------~~~~~l~~~~~d------- 298 (445)
T 2ovr_B 245 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG---H--TNR--VYSLQ------------FDGIHVVSGSLD------- 298 (445)
T ss_dssp EEECSSCEEEEETTSCEEEEEGGGTEEEEEECC---C--SSC--EEEEE------------ECSSEEEEEETT-------
T ss_pred EEECCCEEEEEcCCCEEEEEECCCCcEeEEecC---C--CCc--eEEEE------------ECCCEEEEEeCC-------
Confidence 344888888876 3678999999876644421 1 111 11211 256677777754
Q ss_pred cccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCC
Q 042680 278 EEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEG 357 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g 357 (530)
..+..+|.......++ +.........+. ++++.+++|+.+ | .+.+||..+.
T Consensus 299 ----------~~i~i~d~~~~~~~~~---~~~~~~~v~~~~-~~~~~l~~~~~d-g------------~i~vwd~~~~-- 349 (445)
T 2ovr_B 299 ----------TSIRVWDVETGNCIHT---LTGHQSLTSGME-LKDNILVSGNAD-S------------TVKIWDIKTG-- 349 (445)
T ss_dssp ----------SCEEEEETTTCCEEEE---ECCCCSCEEEEE-EETTEEEEEETT-S------------CEEEEETTTC--
T ss_pred ----------CeEEEEECCCCCEEEE---EcCCcccEEEEE-EeCCEEEEEeCC-C------------eEEEEECCCC--
Confidence 1355677653111111 111112223333 478888888765 1 5789998765
Q ss_pred CceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 358 QRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 358 ~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
+....+..... ....+..+-.+++.+++|+..
T Consensus 350 ~~~~~~~~~~~--~~~~v~~~~~~~~~l~s~~~d 381 (445)
T 2ovr_B 350 QCLQTLQGPNK--HQSAVTCLQFNKNFVITSSDD 381 (445)
T ss_dssp CEEEEECSTTS--CSSCEEEEEECSSEEEEEETT
T ss_pred cEEEEEccCCC--CCCCEEEEEECCCEEEEEeCC
Confidence 12222221110 011122233488888888853
No 121
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=88.53 E-value=7 Score=37.42 Aligned_cols=24 Identities=8% Similarity=0.055 Sum_probs=19.3
Q ss_pred cCCcEEEEeCc--eEEEEeCCCCeEE
Q 042680 202 PDGNVYVFANN--RSVVHDPKANKII 225 (530)
Q Consensus 202 p~G~lfv~Gg~--~~e~yDp~tn~w~ 225 (530)
++|++++.|+. ...+||..+.+-.
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALR 203 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCEEEEEccCCeEEEEECccCcee
Confidence 79999998874 7889999998764
No 122
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=88.48 E-value=6.8 Score=37.90 Aligned_cols=23 Identities=9% Similarity=0.189 Sum_probs=17.8
Q ss_pred CCcEEEEeC--ceEEEEeCCCCeEE
Q 042680 203 DGNVYVFAN--NRSVVHDPKANKII 225 (530)
Q Consensus 203 ~G~lfv~Gg--~~~e~yDp~tn~w~ 225 (530)
+|++++.|+ ..+.+||..+++|.
T Consensus 70 ~~~~l~s~s~D~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 70 YGNILASCSYDRKVIIWREENGTWE 94 (316)
T ss_dssp GSSCEEEEETTSCEEEECCSSSCCC
T ss_pred CCCEEEEEECCCEEEEEECCCCcce
Confidence 488888886 46889999987653
No 123
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=88.37 E-value=3 Score=40.77 Aligned_cols=144 Identities=9% Similarity=0.042 Sum_probs=72.5
Q ss_pred EecCCcEEEEeC--ceEEEEeCCCCe-----EEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCC
Q 042680 200 LLPDGNVYVFAN--NRSVVHDPKANK-----IIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVRE 272 (530)
Q Consensus 200 llp~G~lfv~Gg--~~~e~yDp~tn~-----w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~ 272 (530)
..|+|++++.|+ ..+.+||..... +. .+..+.+. ..+. .++- .. .+++.+++|+.+
T Consensus 66 ~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~-~~~~~~~h--~~~V--~~v~--~s--------p~g~~las~s~D-- 128 (330)
T 2hes_X 66 WRPHTSLLAAGSFDSTVSIWAKEESADRTFEMD-LLAIIEGH--ENEV--KGVA--WS--------NDGYYLATCSRD-- 128 (330)
T ss_dssp ECTTSSEEEEEETTSCEEEEEC-------CCCE-EEEEEC------CE--EEEE--EC--------TTSCEEEEEETT--
T ss_pred ECCCCCEEEEEeCCCcEEEEEcccCcCccccce-eEEEEcCC--CCcE--EEEE--EC--------CCCCEEEEEeCC--
Confidence 347999998887 467889885421 11 11111211 1100 1111 11 267888888764
Q ss_pred ccccccccccccccCCcEEEEEcCCCCCcceec-CCCC-ccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEe
Q 042680 273 GLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPA-PRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLY 350 (530)
Q Consensus 273 ~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~-~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiY 350 (530)
.++..+|.......++.. .+.. ...-.+...-|||++++.|+.+. ++.+|
T Consensus 129 ---------------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-------------~i~iW 180 (330)
T 2hes_X 129 ---------------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD-------------TVRIW 180 (330)
T ss_dssp ---------------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-------------CEEEE
T ss_pred ---------------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-------------eEEEE
Confidence 235567764322344432 2221 11112223348999999998651 57789
Q ss_pred cCCCCCCCceEEecCCCCCCcccccceecCC--CeEEEcCCCC
Q 042680 351 RPNAPEGQRFAELAPTDIPRMYHSVANLLPD--GKVFVGGSND 391 (530)
Q Consensus 351 DP~t~~g~~Wt~la~~~~~R~yHS~a~LLpd--GrVlv~GG~~ 391 (530)
|..+. .|..+..+.--...-.....-|+ +..++.|+..
T Consensus 181 ~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 181 KDYDD---DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp EEETT---EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT
T ss_pred ECCCC---CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC
Confidence 98877 77654433211111111234566 7778888754
No 124
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=88.18 E-value=2.9 Score=41.66 Aligned_cols=30 Identities=17% Similarity=0.221 Sum_probs=23.3
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREF 228 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~ 228 (530)
...+||+.++.|+. .+.+||..+++-.+.+
T Consensus 134 ~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~ 165 (344)
T 4gqb_B 134 SVLSSGTQAVSGSKDICIKVWDLAQQVVLSSY 165 (344)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 34579999999874 6889999999876444
No 125
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=87.88 E-value=25 Score=35.53 Aligned_cols=67 Identities=10% Similarity=0.097 Sum_probs=33.5
Q ss_pred eecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceE-EecCCCCCCcccccceecCCCeEEEcCC
Q 042680 318 LLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFA-ELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 318 vLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt-~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
--|++.++++++...+..-. ........+.+||..+. +-. .+... ....-.+.+..-|||+++++|+
T Consensus 352 ~~~~~~~~~~~~~~d~~~~~-~~~~~~~~i~iwd~~~g---~~~~~l~~~-~~~~v~s~~~fspdg~~lasg~ 419 (435)
T 4e54_B 352 WHPRYNLIVVGRYPDPNFKS-CTPYELRTIDVFDGNSG---KMMCQLYDP-ESSGISSLNEFNPMGDTLASAM 419 (435)
T ss_dssp ECSSSSCEEEECCCCTTSCC-SSTTCCCCEEEECSSSC---CEEEEECCS-SCCCCCCEEEECTTSSCEEEEC
T ss_pred EcCCCCEEEEEEcCCCCeEE-EEecCCCEEEEEECCCC---cEEEEEeCC-CCCcEEEEEEECCCCCEEEEEc
Confidence 34678888887654221100 00011235789998876 432 22111 1111112223458999999876
No 126
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=87.80 E-value=25 Score=35.44 Aligned_cols=104 Identities=6% Similarity=0.036 Sum_probs=61.9
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...++|+.++.|+. ...+||..+++-...+.. . ..+ -.++ . ..++.+++|+.+
T Consensus 317 ~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~---h--~~~--v~~~--~----------~~~~~l~s~s~d------ 371 (464)
T 3v7d_B 317 IYDHERKRCISASMDTTIRIWDLENGELMYTLQG---H--TAL--VGLL--R----------LSDKFLVSAAAD------ 371 (464)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTTTEEEEEECC---C--SSC--EEEE--E----------ECSSEEEEEETT------
T ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC---C--CCc--EEEE--E----------EcCCEEEEEeCC------
Confidence 44578998888874 688999999886644421 1 111 1111 1 246778887754
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAP 355 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~ 355 (530)
..+..+|+......+.. ...........-++|+++++|+ . | .+.+||..+.
T Consensus 372 -----------g~v~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~-d-g------------~i~iwd~~~g 422 (464)
T 3v7d_B 372 -----------GSIRGWDANDYSRKFSY---HHTNLSAITTFYVSDNILVSGS-E-N------------QFNIYNLRSG 422 (464)
T ss_dssp -----------SEEEEEETTTCCEEEEE---ECTTCCCEEEEEECSSEEEEEE-T-T------------EEEEEETTTC
T ss_pred -----------CcEEEEECCCCceeeee---cCCCCccEEEEEeCCCEEEEec-C-C------------eEEEEECCCC
Confidence 13566777642222222 1222233334568999999887 3 1 5789999887
No 127
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=87.76 E-value=12 Score=35.81 Aligned_cols=147 Identities=12% Similarity=0.142 Sum_probs=70.1
Q ss_pred ecCCcEEEEeCc--eEEEEeCCCCe-EEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 201 LPDGNVYVFANN--RSVVHDPKANK-IIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 201 lp~G~lfv~Gg~--~~e~yDp~tn~-w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
.++|+.++.|+. ...+||..+++ -...+....+.. ..+ -.++.+.+. ...+++++++|+.+
T Consensus 126 s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-~~~--v~~~~~~~~------~~~~~~~l~~~~~d------- 189 (357)
T 3i2n_A 126 GEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGEN-KRD--CWTVAFGNA------YNQEERVVCAGYDN------- 189 (357)
T ss_dssp C-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSC-CCC--EEEEEEECC------CC-CCCEEEEEETT-------
T ss_pred CCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCC-CCc--eEEEEEEec------cCCCCCEEEEEccC-------
Confidence 368988888874 67899998875 222343322110 111 111111000 00267788887653
Q ss_pred cccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeec---CCeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 278 EEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLP---NGEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLp---dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
..+..+|+......+.. .. ...-.+....| +|+.+++|+.+ | .+.+||..+
T Consensus 190 ----------~~i~i~d~~~~~~~~~~-~~--~~~v~~~~~~~~~~~~~~l~~~~~d-g------------~i~i~d~~~ 243 (357)
T 3i2n_A 190 ----------GDIKLFDLRNMALRWET-NI--KNGVCSLEFDRKDISMNKLVATSLE-G------------KFHVFDMRT 243 (357)
T ss_dssp ----------SEEEEEETTTTEEEEEE-EC--SSCEEEEEESCSSSSCCEEEEEEST-T------------EEEEEEEEE
T ss_pred ----------CeEEEEECccCceeeec-CC--CCceEEEEcCCCCCCCCEEEEECCC-C------------eEEEEeCcC
Confidence 13556776531111111 11 11122334446 89999988754 1 567888765
Q ss_pred CCC-CceEEecCCCCCCcccccceecCCCe-EEEcCCC
Q 042680 355 PEG-QRFAELAPTDIPRMYHSVANLLPDGK-VFVGGSN 390 (530)
Q Consensus 355 ~~g-~~Wt~la~~~~~R~yHS~a~LLpdGr-Vlv~GG~ 390 (530)
..- .++.......... .-.....-|||+ ++++|+.
T Consensus 244 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~ 280 (357)
T 3i2n_A 244 QHPTKGFASVSEKAHKS-TVWQVRHLPQNRELFLTAGG 280 (357)
T ss_dssp EETTTEEEEEEEECCSS-CEEEEEEETTEEEEEEEEET
T ss_pred CCcccceeeeccCCCcC-CEEEEEECCCCCcEEEEEeC
Confidence 411 1222110000111 111233568998 8888875
No 128
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=87.47 E-value=15 Score=38.15 Aligned_cols=133 Identities=10% Similarity=0.039 Sum_probs=71.9
Q ss_pred CcEEEEeC---ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccccccc
Q 042680 204 GNVYVFAN---NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEE 280 (530)
Q Consensus 204 G~lfv~Gg---~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~ 280 (530)
|+.++.|+ ....+||..+++.. . ..+.+. .. + -.++ ... .+++.+++|+.+
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~-~-~~~~~~-~~-~--v~~~--~~s--------~~g~~l~~~~~d---------- 509 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVS-F-DLKTPL-RA-K--PSYI--SIS--------PSETYIAAGDVM---------- 509 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEE-E-ECSSCC-SS-C--EEEE--EEC--------TTSSEEEEEETT----------
T ss_pred CCEEEEeecCCCeEEEEECCCcccc-c-cccCCc-cC-c--eEEE--EEC--------CCCCEEEEcCCC----------
Confidence 77777765 36889999988664 1 222211 11 1 1111 112 268889998764
Q ss_pred ccccccCCcEEEEEcCCCCCcceec-CCC--Cccccceeeeec----------CCeEEEEcCCCCCCCCcccCCCCCccc
Q 042680 281 KRFVNALDDCARMVVTSPNPEWKIE-KMP--APRTMADGVLLP----------NGEVLIINGADLGSGGWHCADKPSLKP 347 (530)
Q Consensus 281 ~~~~~a~~s~~~~dp~~~~~~W~~~-~M~--~~R~~~~~vvLp----------dG~VlViGG~~~g~~g~~~~~~p~~~~ 347 (530)
..+..+|... .+.. .+. ....-.+....| ||+++++++.+ | .+
T Consensus 510 -------g~i~iw~~~~----~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-g------------~i 565 (615)
T 1pgu_A 510 -------GKILLYDLQS----REVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD-T------------NI 565 (615)
T ss_dssp -------SCEEEEETTT----TEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT-S------------CE
T ss_pred -------CeEEEeeCCC----CcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCC-C------------cE
Confidence 1255677643 2221 222 222233344557 99999999865 1 57
Q ss_pred EEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 348 MLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 348 eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.+||..+.. +....+. .....-......|||+ +++||..
T Consensus 566 ~iw~~~~~~-~~~~~~~---~h~~~v~~l~~s~~~~-l~s~~~d 604 (615)
T 1pgu_A 566 FIYSVKRPM-KIIKALN---AHKDGVNNLLWETPST-LVSSGAD 604 (615)
T ss_dssp EEEESSCTT-CCEEETT---SSTTCEEEEEEEETTE-EEEEETT
T ss_pred EEEECCCCc-eechhhh---cCccceEEEEEcCCCC-eEEecCC
Confidence 899987751 1222221 1111111234568999 8888753
No 129
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=86.63 E-value=5.2 Score=39.18 Aligned_cols=103 Identities=11% Similarity=0.054 Sum_probs=60.3
Q ss_pred EecCCcEEEEeCc----eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccc
Q 042680 200 LLPDGNVYVFANN----RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLY 275 (530)
Q Consensus 200 llp~G~lfv~Gg~----~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 275 (530)
...+|.||+..|. +...+|+++++..+.++ ++. +.+ |.++.+ .+++||+.-..+
T Consensus 49 ~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~~--~~F---geGit~-----------~g~~ly~ltw~~----- 106 (262)
T 3nol_A 49 FYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIE-LGK--RYF---GEGISD-----------WKDKIVGLTWKN----- 106 (262)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTTCCEEEEEE-CCT--TCC---EEEEEE-----------ETTEEEEEESSS-----
T ss_pred EEECCEEEEECCCCCCceEEEEECCCCcEEEEEe-cCC--ccc---eeEEEE-----------eCCEEEEEEeeC-----
Confidence 3448999999874 67899999999886664 442 233 332211 367999984322
Q ss_pred cccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCC-eEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 276 LGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNG-EVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 276 ~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG-~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
+.+.+||+.+ -+-.. ..+.+- .+-++. +|| ++|+..|.. +...+||++
T Consensus 107 ------------~~v~v~D~~t--~~~~~-ti~~~~-eG~glt-~dg~~L~~SdGs~--------------~i~~iDp~T 155 (262)
T 3nol_A 107 ------------GLGFVWNIRN--LRQVR-SFNYDG-EGWGLT-HNDQYLIMSDGTP--------------VLRFLDPES 155 (262)
T ss_dssp ------------SEEEEEETTT--CCEEE-EEECSS-CCCCEE-ECSSCEEECCSSS--------------EEEEECTTT
T ss_pred ------------CEEEEEECcc--CcEEE-EEECCC-CceEEe-cCCCEEEEECCCC--------------eEEEEcCCC
Confidence 3467788753 22111 222221 333344 455 566655522 577899998
Q ss_pred C
Q 042680 355 P 355 (530)
Q Consensus 355 ~ 355 (530)
.
T Consensus 156 ~ 156 (262)
T 3nol_A 156 L 156 (262)
T ss_dssp C
T ss_pred C
Confidence 7
No 130
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=86.27 E-value=45 Score=36.88 Aligned_cols=139 Identities=9% Similarity=0.066 Sum_probs=74.4
Q ss_pred EecCCcEEEEeCceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccc
Q 042680 200 LLPDGNVYVFANNRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEE 279 (530)
Q Consensus 200 llp~G~lfv~Gg~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~ 279 (530)
.-.+|+|++.......+||+.++++ . +...... ...+......++ .+ .+++|++... .
T Consensus 505 ~d~~g~lWigt~~Gl~~~~~~~~~~-~-~~~~~~~-~~l~~~~i~~i~-------~d--~~g~lWigT~-~--------- 562 (795)
T 4a2l_A 505 RDSHKRLWIGGEEGLSVFKQEGLDI-Q-KASILPV-SNVTKLFTNCIY-------EA--SNGIIWVGTR-E--------- 562 (795)
T ss_dssp ECTTCCEEEEESSCEEEEEEETTEE-E-ECCCSCS-CGGGGSCEEEEE-------EC--TTSCEEEEES-S---------
T ss_pred ECCCCCEEEEeCCceEEEeCCCCeE-E-EecCCCC-CCCCCCeeEEEE-------EC--CCCCEEEEeC-C---------
Confidence 3458999988766788999999987 3 2211000 001100111111 11 2677776421 1
Q ss_pred cccccccCCcEEEEEcCCCCCccee---c-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCC
Q 042680 280 EKRFVNALDDCARMVVTSPNPEWKI---E-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAP 355 (530)
Q Consensus 280 ~~~~~~a~~s~~~~dp~~~~~~W~~---~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~ 355 (530)
-..+||+.. .+++. . .++....+ +.+.-.+|+|++... . -..+|||++.
T Consensus 563 ---------Gl~~~d~~~--~~~~~~~~~~gl~~~~i~-~i~~d~~g~lWi~t~-~--------------Gl~~~~~~~~ 615 (795)
T 4a2l_A 563 ---------GFYCFNEKD--KQIKRYNTTNGLPNNVVY-GILEDSFGRLWLSTN-R--------------GISCFNPETE 615 (795)
T ss_dssp ---------CEEEEETTT--TEEEEECGGGTCSCSCEE-EEEECTTSCEEEEET-T--------------EEEEEETTTT
T ss_pred ---------CceeECCCC--CcEEEeCCCCCCchhheE-EEEECCCCCEEEEcC-C--------------ceEEEcCCCC
Confidence 134667652 44433 1 35443332 333335789988653 1 2468999988
Q ss_pred CCCceEEecC---CCCCCcccccceecCCCeEEEcCCC
Q 042680 356 EGQRFAELAP---TDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 356 ~g~~Wt~la~---~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
++..... ++.......+++..+||++|++|.+
T Consensus 616 ---~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~ 650 (795)
T 4a2l_A 616 ---KFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGIN 650 (795)
T ss_dssp ---EEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETT
T ss_pred ---cEEEcCCcCCCccccCccCceeECCCCeEEEecCC
Confidence 8875432 2222222234556789999998864
No 131
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=86.13 E-value=6.9 Score=39.69 Aligned_cols=171 Identities=13% Similarity=0.139 Sum_probs=86.4
Q ss_pred CCccceEEEe-c-CCcEEEEe--CceEEEEeCCCCeEEEEccCCCC----CCCccCCCceEeeccCCCCCCCCCCCCcEE
Q 042680 192 NNLYPFVYLL-P-DGNVYVFA--NNRSVVHDPKANKIIREFPQLPG----GARSYPATGTSVLLPLYLPRDTYKPVDAEV 263 (530)
Q Consensus 192 ~~~Yp~~~ll-p-~G~lfv~G--g~~~e~yDp~tn~w~~~~p~mp~----~~r~yp~~g~svmlpl~~~~~~~~~~~gkI 263 (530)
.++||-...- . +|++|+.- ...+..|||..+..+ .+ .+++ +.-....+|-.+ +--. ..+++
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~-~~-~~~~~s~~g~~~~~~sGl~~-~~~D--------~~grL 79 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHF-NV-VIDGASSNGDGEQQMSGLSL-LTHD--------NSKRL 79 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEE-EE-CCTTTCCSSCCSEEEEEEEE-SSSS--------SCCEE
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEE-EE-ecCCccccCCCcceeeEEEE-eccC--------CCCcE
Confidence 4677765444 2 46655543 356788999977654 33 3442 111111123222 1001 15899
Q ss_pred EEecCccCCccccccccccccccCCcEEEEEcC---CCCCcceec-C-CCC---------ccccceeeeecCCeEEEEcC
Q 042680 264 LICGGSVREGLYLGEEEKRFVNALDDCARMVVT---SPNPEWKIE-K-MPA---------PRTMADGVLLPNGEVLIING 329 (530)
Q Consensus 264 ~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~---~~~~~W~~~-~-M~~---------~R~~~~~vvLpdG~VlViGG 329 (530)
+||- ....++.. .+........+.+||+. .....|... + ... ....-++++=++|.+||++-
T Consensus 80 ~vv~-~~~~af~~---~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s 155 (334)
T 2p9w_A 80 FAVM-KNAKSFNF---ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA 155 (334)
T ss_dssp EEEE-EETTTTCT---TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE
T ss_pred EEEE-cccccccc---cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC
Confidence 9972 11111110 01111234568899987 334556543 1 111 12345778889999999864
Q ss_pred CCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 330 ADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 330 ~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
... ..+.++||+...-..|-.-.+....|..-.-.+..|||+.|++-.
T Consensus 156 ~~~------------~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~ 203 (334)
T 2p9w_A 156 LGM------------PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG 203 (334)
T ss_dssp ESS------------CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEES
T ss_pred CCC------------CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEc
Confidence 320 146788887652234543222233344333345568997666544
No 132
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=86.11 E-value=27 Score=34.12 Aligned_cols=109 Identities=8% Similarity=0.093 Sum_probs=58.4
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcE-EEEecCccCCccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAE-VLICGGSVREGLY 275 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gk-I~v~GG~~~~~~~ 275 (530)
...++|+.++.|+. ...+||....... .+..- .. +.. .....| +++ ++++|+.+
T Consensus 170 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~h----~~-~v~-~~~~~~-----------~~~~~l~s~~~d----- 226 (383)
T 3ei3_B 170 DVSVSRQMLATGDSTGRLLLLGLDGHEIF-KEKLH----KA-KVT-HAEFNP-----------RCDWLMATSSVD----- 226 (383)
T ss_dssp EEETTTTEEEEEETTSEEEEEETTSCEEE-EEECS----SS-CEE-EEEECS-----------SCTTEEEEEETT-----
T ss_pred EECCCCCEEEEECCCCCEEEEECCCCEEE-EeccC----CC-cEE-EEEECC-----------CCCCEEEEEeCC-----
Confidence 44579999998874 6789998654433 33211 11 111 111211 455 78887754
Q ss_pred cccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeec-CCeEEEEcCCCCCCCCcccCCCCCcccEEecCC
Q 042680 276 LGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLP-NGEVLIINGADLGSGGWHCADKPSLKPMLYRPN 353 (530)
Q Consensus 276 ~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLp-dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~ 353 (530)
..+..+|+......-... .+.....-.+...-| ||+.+++++.+. .+.+||..
T Consensus 227 ------------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~-------------~i~iwd~~ 281 (383)
T 3ei3_B 227 ------------ATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRN-------------EIRVYSSY 281 (383)
T ss_dssp ------------SEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSS-------------EEEEEETT
T ss_pred ------------CEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCC-------------cEEEEECC
Confidence 135567765321111111 122222223334458 999999988641 57788877
Q ss_pred CC
Q 042680 354 AP 355 (530)
Q Consensus 354 t~ 355 (530)
+.
T Consensus 282 ~~ 283 (383)
T 3ei3_B 282 DW 283 (383)
T ss_dssp BT
T ss_pred CC
Confidence 65
No 133
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=86.09 E-value=3.9 Score=40.98 Aligned_cols=139 Identities=9% Similarity=0.003 Sum_probs=72.5
Q ss_pred EecCCcEEEEeCc--eEEEEeCCCCeEEEEccC--CCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccc
Q 042680 200 LLPDGNVYVFANN--RSVVHDPKANKIIREFPQ--LPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLY 275 (530)
Q Consensus 200 llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~--mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 275 (530)
..+++++++.++. ...+||..+++..+..+. +.+ .... -.++.++ .++++|+.|+.+
T Consensus 130 ~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-~~~~---v~~~~~~----------~~~~~~~s~~~d----- 190 (433)
T 3bws_A 130 FIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKK-KLGF---VETISIP----------EHNELWVSQMQA----- 190 (433)
T ss_dssp ESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHT-TCCE---EEEEEEG----------GGTEEEEEEGGG-----
T ss_pred EeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccc-cCCc---eeEEEEc----------CCCEEEEEECCC-----
Confidence 4568899998864 489999999987643321 000 0000 0111111 268888887753
Q ss_pred cccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEE-EEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 276 LGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVL-IINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 276 ~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~Vl-ViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
..+.++|+......++. ...... -.....-|||+.+ +.++.. + .+.+||+.+
T Consensus 191 ------------~~v~~~d~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~~~~~~~-~------------~i~~~d~~~ 243 (433)
T 3bws_A 191 ------------NAVHVFDLKTLAYKATV-DLTGKW-SKILLYDPIRDLVYCSNWIS-E------------DISVIDRKT 243 (433)
T ss_dssp ------------TEEEEEETTTCCEEEEE-ECSSSS-EEEEEEETTTTEEEEEETTT-T------------EEEEEETTT
T ss_pred ------------CEEEEEECCCceEEEEE-cCCCCC-eeEEEEcCCCCEEEEEecCC-C------------cEEEEECCC
Confidence 23567777531111222 111111 2233445888765 444332 1 578999987
Q ss_pred CCCCceEEecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 355 PEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 355 ~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
. +....-+ ....-+ ...+-|||+.+++++.
T Consensus 244 ~---~~~~~~~--~~~~~~-~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 244 K---LEIRKTD--KIGLPR-GLLLSKDGKELYIAQF 273 (433)
T ss_dssp T---EEEEECC--CCSEEE-EEEECTTSSEEEEEEE
T ss_pred C---cEEEEec--CCCCce-EEEEcCCCCEEEEEEC
Confidence 7 5433211 111122 2345689977666653
No 134
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.68 E-value=13 Score=35.58 Aligned_cols=27 Identities=11% Similarity=0.055 Sum_probs=22.6
Q ss_pred EEecCCcEEEEeCceEEEEeCCCCeEE
Q 042680 199 YLLPDGNVYVFANNRSVVHDPKANKII 225 (530)
Q Consensus 199 ~llp~G~lfv~Gg~~~e~yDp~tn~w~ 225 (530)
...++|+|++..+....+||+.++++.
T Consensus 60 ~~~~dG~l~v~~~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 60 ALRQSGGYVATIGTKFCALNWKEQSAV 86 (297)
T ss_dssp EEBTTSSEEEEETTEEEEEETTTTEEE
T ss_pred EECCCCCEEEEECCeEEEEECCCCcEE
Confidence 445799988888788899999999876
No 135
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=85.65 E-value=16 Score=35.22 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=23.2
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREF 228 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~ 228 (530)
...++|+.++.|+ ..+.+||..+++-.+.+
T Consensus 72 ~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~ 103 (319)
T 3frx_A 72 TLTADGAYALSASWDKTLRLWDVATGETYQRF 103 (319)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCCeeEEE
Confidence 4557999999887 46889999999865444
No 136
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=85.42 E-value=31 Score=34.22 Aligned_cols=200 Identities=15% Similarity=0.111 Sum_probs=99.9
Q ss_pred eEEEEeCCCCcEEEccccC-CcccccceeccCCcEEEccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccc
Q 042680 100 HSIFYDYNKNAVKALKVQS-DTWCSSGGLSADGRLVMLSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDF 177 (530)
Q Consensus 100 ~~~~yDp~t~~w~~l~~~~-~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~ 177 (530)
...+||..+++...+.... .....+.+ ..+||+.+++|+.++ .+.+| ..+. +....+.. .
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~--------~s~~~~~l~~~~~dg-~i~iwd~~~~---~~~~~~~~--~---- 175 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVK--------WSHDGSFLSVGLGNG-LVDIYDVESQ---TKLRTMAG--H---- 175 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEE--------ECTTSSEEEEEETTS-CEEEEETTTC---CEEEEECC--C----
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEE--------ECCCCCEEEEECCCC-eEEEEECcCC---eEEEEecC--C----
Confidence 3568888888766554332 11111122 345888988888764 57777 5432 11111110 0
Q ss_pred cCCCCCCCccccccCCccceEEEecCCcEEEEeCc--eEEEEeCCC-CeEEEEccCCCCCCCccCCCceEeeccCCCCCC
Q 042680 178 LERPGNPKGRFRLENNLYPFVYLLPDGNVYVFANN--RSVVHDPKA-NKIIREFPQLPGGARSYPATGTSVLLPLYLPRD 254 (530)
Q Consensus 178 ~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg~--~~e~yDp~t-n~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~ 254 (530)
-.+...+..++++++.|+. ...+||..+ +.-...+..- ..+..+ ....
T Consensus 176 ----------------~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~v~~-~~~~------- 226 (401)
T 4aez_A 176 ----------------QARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGH-----SSEVCG-LAWR------- 226 (401)
T ss_dssp ----------------SSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC-----SSCEEE-EEEC-------
T ss_pred ----------------CCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCC-----CCCeeE-EEEc-------
Confidence 0112233448888888874 678899984 3322222211 111111 1111
Q ss_pred CCCCCCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCC-eEEEEcCCCCC
Q 042680 255 TYKPVDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNG-EVLIINGADLG 333 (530)
Q Consensus 255 ~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG-~VlViGG~~~g 333 (530)
.+++.+++|+.+ ..+..+|........... .....-.+....|+| .++++||...
T Consensus 227 ----~~~~~l~s~~~d-----------------~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~p~~~~ll~~~~gs~- 282 (401)
T 4aez_A 227 ----SDGLQLASGGND-----------------NVVQIWDARSSIPKFTKT--NHNAAVKAVAWCPWQSNLLATGGGTM- 282 (401)
T ss_dssp ----TTSSEEEEEETT-----------------SCEEEEETTCSSEEEEEC--CCSSCCCEEEECTTSTTEEEEECCTT-
T ss_pred ----CCCCEEEEEeCC-----------------CeEEEccCCCCCccEEec--CCcceEEEEEECCCCCCEEEEecCCC-
Confidence 267888888754 135667765311111111 111222333445755 6777775211
Q ss_pred CCCcccCCCCCcccEEecCCCCCCCceE-EecCCCCCCcccccceecCCCeEEEc
Q 042680 334 SGGWHCADKPSLKPMLYRPNAPEGQRFA-ELAPTDIPRMYHSVANLLPDGKVFVG 387 (530)
Q Consensus 334 ~~g~~~~~~p~~~~eiYDP~t~~g~~Wt-~la~~~~~R~yHS~a~LLpdGrVlv~ 387 (530)
-..+.+||..+. +-. .+.. .. .-.....-|||+.+++
T Consensus 283 ----------d~~i~i~d~~~~---~~~~~~~~---~~-~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 283 ----------DKQIHFWNAATG---ARVNTVDA---GS-QVTSLIWSPHSKEIMS 320 (401)
T ss_dssp ----------TCEEEEEETTTC---CEEEEEEC---SS-CEEEEEECSSSSEEEE
T ss_pred ----------CCEEEEEECCCC---CEEEEEeC---CC-cEEEEEECCCCCeEEE
Confidence 015789998776 332 2211 11 1123345689998888
No 137
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=85.21 E-value=28 Score=33.50 Aligned_cols=136 Identities=13% Similarity=0.114 Sum_probs=66.6
Q ss_pred CCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccccccc
Q 042680 203 DGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEE 280 (530)
Q Consensus 203 ~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~ 280 (530)
++.+++.|+. ...+||..+.+....+. +. ..+... ... . .+++.+++||.+ +
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~---~h--~~~v~~-~~~---s--------p~g~~l~s~~~d-g-------- 218 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQIEADFI---GH--NSNINT-LTA---S--------PDGTLIASAGKD-G-------- 218 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEEEEEEC---CC--CSCEEE-EEE---C--------TTSSEEEEEETT-C--------
T ss_pred CccEEEEEeCCCEEEEEECCcchhheeec---CC--CCcEEE-EEE---c--------CCCCEEEEEeCC-C--------
Confidence 4557777763 57899999887653332 11 111111 111 1 268888888865 1
Q ss_pred ccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCce
Q 042680 281 KRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRF 360 (530)
Q Consensus 281 ~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~W 360 (530)
.+..+|........+. ... .. ..+...-|||+.++.+... ...+|+.... ..+
T Consensus 219 --------~i~iwd~~~~~~~~~~-~~~-~~-v~~~~~sp~~~~la~~~~~--------------~i~v~~~~~~--~~~ 271 (319)
T 3frx_A 219 --------EIMLWNLAAKKAMYTL-SAQ-DE-VFSLAFSPNRYWLAAATAT--------------GIKVFSLDPQ--YLV 271 (319)
T ss_dssp --------EEEEEETTTTEEEEEE-ECC-SC-EEEEEECSSSSEEEEEETT--------------EEEEEEETTE--EEE
T ss_pred --------eEEEEECCCCcEEEEe-cCC-Cc-EEEEEEcCCCCEEEEEcCC--------------CcEEEEeCcC--eee
Confidence 2455665431111111 111 11 2234456899988876532 2455655443 012
Q ss_pred EEecCCCCC-Ccccc----cceecCCCeEEEcCCCC
Q 042680 361 AELAPTDIP-RMYHS----VANLLPDGKVFVGGSND 391 (530)
Q Consensus 361 t~la~~~~~-R~yHS----~a~LLpdGrVlv~GG~~ 391 (530)
..+.+.... ...|. ....-|||+.+++|+..
T Consensus 272 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D 307 (319)
T 3frx_A 272 DDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD 307 (319)
T ss_dssp EEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT
T ss_pred eccCccccccccCcCcceeEEEECCCCCEEEEeecC
Confidence 222211100 00111 23356899999999864
No 138
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=85.12 E-value=43 Score=35.65 Aligned_cols=29 Identities=17% Similarity=0.220 Sum_probs=23.2
Q ss_pred EecCCcEEEEeC--ceEEEEeCCCCeEEEEc
Q 042680 200 LLPDGNVYVFAN--NRSVVHDPKANKIIREF 228 (530)
Q Consensus 200 llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~ 228 (530)
..|||+.++.|+ ..+.+||..+++..+.+
T Consensus 247 ~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 247 WSPDGTKIASASADKTIKIWNVATLKVEKTI 277 (611)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCceeeee
Confidence 457999999887 46899999999877554
No 139
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=85.08 E-value=5.1 Score=40.87 Aligned_cols=172 Identities=15% Similarity=0.151 Sum_probs=80.8
Q ss_pred CCccceEEEecCCcEEEEe--------CceEEEEeC--CCCeEEEEccCCCCCCCccCC--CceEeeccCCCCCCCCCCC
Q 042680 192 NNLYPFVYLLPDGNVYVFA--------NNRSVVHDP--KANKIIREFPQLPGGARSYPA--TGTSVLLPLYLPRDTYKPV 259 (530)
Q Consensus 192 ~~~Yp~~~llp~G~lfv~G--------g~~~e~yDp--~tn~w~~~~p~mp~~~r~yp~--~g~svmlpl~~~~~~~~~~ 259 (530)
...||..+.++||.|++.. +....+|-- ...+|. ++..++.....+.. ..+...+|-.. ....
T Consensus 22 ~~~yp~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG~TW~-~~~~v~~~~~g~~~~~~P~l~~lp~~v----~~~~ 96 (355)
T 3a72_A 22 RTLYPRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHGKTWN-EISRVHDTVNGYGLRYQPFLYSLPERV----GSFK 96 (355)
T ss_dssp SEEEEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTTSCCE-EEEEECCTTTSSCEEEEEEEEECSSCB----TTBC
T ss_pred CCccceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCCcCcC-CCcccCCCcCCcccccCCcEEecCccc----ccCC
Confidence 4578999999999999863 122333322 235687 33322211111100 01122233100 0012
Q ss_pred CcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-C-----CCCcc-----ccceeeeecCCeEEEEc
Q 042680 260 DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-K-----MPAPR-----TMADGVLLPNGEVLIIN 328 (530)
Q Consensus 260 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~-----M~~~R-----~~~~~vvLpdG~VlViG 328 (530)
+|+|+.+|-.. ... .....+..+.-+|...+|+.. . ++.++ +....+.+.+|++++.-
T Consensus 97 ~G~ll~~~~~~-~~d----------~~~~~~~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP~~~~~~G~l~~~~ 165 (355)
T 3a72_A 97 KGTLLLAGSSI-PTD----------LSSTDIVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEPFLLANKGKLICYY 165 (355)
T ss_dssp TTCEEEEEEEC-CTT----------CCCEEEEEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEEEEEEEETTEEEEEE
T ss_pred CCcEEEEEeee-cCC----------CCCceEEEEEECCCCccCccCccccccCccccccCCCccccceEEccCCeEEEEE
Confidence 68888874221 000 001123344445667889864 3 22221 11114567899998876
Q ss_pred CCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCC-----CCcccccceecCCCeEEEc
Q 042680 329 GADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDI-----PRMYHSVANLLPDGKVFVG 387 (530)
Q Consensus 329 G~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~-----~R~yHS~a~LLpdGrVlv~ 387 (530)
...++... ..+....--.++ |++|+....... .|.....++-|+||+++++
T Consensus 166 ~~~~~~~~-------~~~~~~~~~S~D-G~TWs~~~~~~~~~~~~~rpg~p~v~~l~dG~l~l~ 221 (355)
T 3a72_A 166 SDQRDNAT-------YGQTMVHQVTND-LKNWGPVVEDVTYPTYTDRPGMPVVTKLPNGQYFYV 221 (355)
T ss_dssp EECCCTTT-------CSCEEEEEEESS-SSSCCCCEEEECCSSTTCEEEEEEEEECTTSCEEEE
T ss_pred CCCCCCCC-------CCcEEEEEECCC-CCCCCCCeeccccCccCCCCCceEEEECCCCCEEEE
Confidence 43221000 011122222345 779975433211 2333445677899998776
No 140
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=84.66 E-value=4.8 Score=39.00 Aligned_cols=108 Identities=13% Similarity=0.069 Sum_probs=58.3
Q ss_pred ecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeec-cCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 201 LPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLL-PLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 201 lp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svml-pl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
.++|+.++.|+ ..+.+||..+++.. .+..+.+. ..+. .++.+ |. .++++++.|+.+
T Consensus 22 s~~g~~lasgs~D~~v~lwd~~~~~~~-~~~~l~gH--~~~V--~~v~~~~~---------~~~~~l~s~s~D------- 80 (316)
T 3bg1_A 22 DYYGTRLATCSSDRSVKIFDVRNGGQI-LIADLRGH--EGPV--WQVAWAHP---------MYGNILASCSYD------- 80 (316)
T ss_dssp CGGGCEEEEEETTTEEEEEEEETTEEE-EEEEEECC--SSCE--EEEEECCG---------GGSSCEEEEETT-------
T ss_pred cCCCCEEEEEeCCCeEEEEEecCCCcE-EEEEEcCC--CccE--EEEEeCCC---------CCCCEEEEEECC-------
Confidence 47899999887 46889999887542 22222221 1111 11211 10 136788888764
Q ss_pred cccccccccCCcEEEEEcCCCCCcceec-CC--CCccccceeeeecC--CeEEEEcCCCCCCCCcccCCCCCcccEEecC
Q 042680 278 EEEKRFVNALDDCARMVVTSPNPEWKIE-KM--PAPRTMADGVLLPN--GEVLIINGADLGSGGWHCADKPSLKPMLYRP 352 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M--~~~R~~~~~vvLpd--G~VlViGG~~~g~~g~~~~~~p~~~~eiYDP 352 (530)
.++..+|+.. .+|+.. .+ ....+. +...-|+ |++++.|+.+. ++.+||.
T Consensus 81 ----------~~v~iWd~~~--~~~~~~~~~~~h~~~V~-~v~~~p~~~g~~lasgs~D~-------------~i~lwd~ 134 (316)
T 3bg1_A 81 ----------RKVIIWREEN--GTWEKSHEHAGHDSSVN-SVCWAPHDYGLILACGSSDG-------------AISLLTY 134 (316)
T ss_dssp ----------SCEEEECCSS--SCCCEEEEECCCSSCCC-EEEECCTTTCSCEEEECSSS-------------CEEEEEE
T ss_pred ----------CEEEEEECCC--CcceEEEEccCCCCceE-EEEECCCCCCcEEEEEcCCC-------------CEEEEec
Confidence 2355667653 445432 22 222222 2233466 88999888651 4677887
Q ss_pred CCC
Q 042680 353 NAP 355 (530)
Q Consensus 353 ~t~ 355 (530)
.+.
T Consensus 135 ~~~ 137 (316)
T 3bg1_A 135 TGE 137 (316)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 141
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=84.40 E-value=31 Score=33.37 Aligned_cols=27 Identities=11% Similarity=-0.078 Sum_probs=21.4
Q ss_pred EEEecCCcEEEEeCc--eEEEEeCCCCeE
Q 042680 198 VYLLPDGNVYVFANN--RSVVHDPKANKI 224 (530)
Q Consensus 198 ~~llp~G~lfv~Gg~--~~e~yDp~tn~w 224 (530)
+...|||++++.|+. ...+||.++++.
T Consensus 176 ~~~~pdg~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 176 GVLHKDSLLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp EEECTTSCEEEEECTTSCEEEEESSCTTS
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCCCCC
Confidence 345689999999874 688999998763
No 142
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=84.04 E-value=18 Score=35.49 Aligned_cols=146 Identities=11% Similarity=0.147 Sum_probs=76.4
Q ss_pred EEecC-CcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCC--ccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCc
Q 042680 199 YLLPD-GNVYVFANN--RSVVHDPKANKIIREFPQLPGGAR--SYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREG 273 (530)
Q Consensus 199 ~llp~-G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r--~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~ 273 (530)
...++ +++++.|+. ...+||..+++....+.. +.... ..+.. .....| .+.+++++|+.+..
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~v~-~~~~~~----------~~~~~l~~~~~d~~- 238 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSY-TSPNSGIKQQLS-VVEWHP----------KNSTRVATATGSDN- 238 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEEEEEECC-CCCSSCCCCCEE-EEEECS----------SCTTEEEEEECCSS-
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEec-cccccccCCceE-EEEECC----------CCCCEEEEEECCCC-
Confidence 34566 789998874 588999999887644432 11000 11111 112211 12367777765411
Q ss_pred cccccccccccccCCcEEEEEcCCCCCcceecCCC--Cccccceeeeec-CCeEEEEcCCCCCCCCcccCCCCCcccEEe
Q 042680 274 LYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMP--APRTMADGVLLP-NGEVLIINGADLGSGGWHCADKPSLKPMLY 350 (530)
Q Consensus 274 ~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~--~~R~~~~~vvLp-dG~VlViGG~~~g~~g~~~~~~p~~~~eiY 350 (530)
...+..||+... .-....+. ......+...-| ||+++++++.+ | ++.+|
T Consensus 239 -------------~~~i~~~d~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-g------------~v~~w 290 (416)
T 2pm9_A 239 -------------DPSILIWDLRNA--NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-N------------TVLLW 290 (416)
T ss_dssp -------------SCCCCEEETTST--TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-S------------EEEEE
T ss_pred -------------CceEEEEeCCCC--CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC-C------------CEEEe
Confidence 113456787631 11111222 222222333446 89999999865 1 57899
Q ss_pred cCCCCCCCce-EEecCCCCCCcccccceecCCC-eEEEcCCCC
Q 042680 351 RPNAPEGQRF-AELAPTDIPRMYHSVANLLPDG-KVFVGGSND 391 (530)
Q Consensus 351 DP~t~~g~~W-t~la~~~~~R~yHS~a~LLpdG-rVlv~GG~~ 391 (530)
|..+. +- ..+.... ..-.....-||| +++++|+..
T Consensus 291 d~~~~---~~~~~~~~~~---~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 291 NPESA---EQLSQFPARG---NWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp CSSSC---CEEEEEECSS---SCCCCEEECTTCTTEEEECCSS
T ss_pred eCCCC---ccceeecCCC---CceEEEEECCCCCCEEEEEecC
Confidence 98776 32 2222111 111223456898 899998853
No 143
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=83.59 E-value=36 Score=33.57 Aligned_cols=116 Identities=15% Similarity=0.207 Sum_probs=63.4
Q ss_pred EEEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCC-CCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcc
Q 042680 198 VYLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGG-ARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGL 274 (530)
Q Consensus 198 ~~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~-~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~ 274 (530)
+...|+|+.++.|+. ...+||..+++-.+.+..-+.. ....+...+.+.- .+++++++|+.+ +
T Consensus 255 v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-----------~~g~~l~~g~~d-g-- 320 (380)
T 3iz6_a 255 VKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFS-----------ISGRLLFAGYSN-G-- 320 (380)
T ss_dssp EEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEEC-----------SSSSEEEEECTT-S--
T ss_pred EEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEEC-----------CCCCEEEEEECC-C--
Confidence 345689999999985 6889999998765433221110 0011111112211 268888888764 1
Q ss_pred ccccccccccccCCcEEEEEcCCCCCcceecCC---CCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEec
Q 042680 275 YLGEEEKRFVNALDDCARMVVTSPNPEWKIEKM---PAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYR 351 (530)
Q Consensus 275 ~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M---~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYD 351 (530)
.+..+|............+ ...+.. +...-|||+.++.|+.+. ++.+||
T Consensus 321 --------------~i~vwd~~~~~~~~~~~~~~~~h~~~v~-~l~~s~dg~~l~sgs~D~-------------~i~iW~ 372 (380)
T 3iz6_a 321 --------------DCYVWDTLLAEMVLNLGTLQNSHEGRIS-CLGLSSDGSALCTGSWDK-------------NLKIWA 372 (380)
T ss_dssp --------------CEEEEETTTCCEEEEECCSCSSCCCCCC-EEEECSSSSEEEEECTTS-------------CEEEEE
T ss_pred --------------CEEEEECCCCceEEEEecccCCCCCceE-EEEECCCCCEEEEeeCCC-------------CEEEEe
Confidence 3556776431111111111 223333 233458999999998761 467777
Q ss_pred CCCC
Q 042680 352 PNAP 355 (530)
Q Consensus 352 P~t~ 355 (530)
....
T Consensus 373 ~~~~ 376 (380)
T 3iz6_a 373 FSGH 376 (380)
T ss_dssp CCSS
T ss_pred cCCC
Confidence 6543
No 144
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=83.20 E-value=10 Score=36.60 Aligned_cols=105 Identities=9% Similarity=0.129 Sum_probs=63.0
Q ss_pred EEEecCCcEEEEeCc----eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCc
Q 042680 198 VYLLPDGNVYVFANN----RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREG 273 (530)
Q Consensus 198 ~~llp~G~lfv~Gg~----~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~ 273 (530)
.....+|.||+..|. +...+|+++++..+.+ +++. +.+ |.++.+ .+++||++...+
T Consensus 25 GL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~-~l~~--~~f---geGi~~-----------~~~~ly~ltw~~--- 84 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETGRSSVRKVDLETGRILQRA-EVPP--PYF---GAGIVA-----------WRDRLIQLTWRN--- 84 (243)
T ss_dssp EEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEE-ECCT--TCC---EEEEEE-----------ETTEEEEEESSS---
T ss_pred cEEEECCEEEEECCCCCCceEEEEECCCCCEEEEE-eCCC--Ccc---eeEEEE-----------eCCEEEEEEeeC---
Confidence 344557899999775 6789999999988655 3442 222 333211 368999984322
Q ss_pred cccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecC
Q 042680 274 LYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRP 352 (530)
Q Consensus 274 ~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP 352 (530)
..+.+||+.+ .+.. ..+.+- .+-++.-.++++|+..|.. +...+||
T Consensus 85 --------------~~v~v~D~~t----l~~~~ti~~~~-~Gwglt~dg~~L~vSdgs~--------------~l~~iDp 131 (243)
T 3mbr_X 85 --------------HEGFVYDLAT----LTPRARFRYPG-EGWALTSDDSHLYMSDGTA--------------VIRKLDP 131 (243)
T ss_dssp --------------SEEEEEETTT----TEEEEEEECSS-CCCEEEECSSCEEEECSSS--------------EEEEECT
T ss_pred --------------CEEEEEECCc----CcEEEEEeCCC-CceEEeeCCCEEEEECCCC--------------eEEEEeC
Confidence 3467788753 2322 222222 3333443344677777632 5778999
Q ss_pred CCC
Q 042680 353 NAP 355 (530)
Q Consensus 353 ~t~ 355 (530)
++.
T Consensus 132 ~t~ 134 (243)
T 3mbr_X 132 DTL 134 (243)
T ss_dssp TTC
T ss_pred CCC
Confidence 987
No 145
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=82.49 E-value=32 Score=32.08 Aligned_cols=20 Identities=10% Similarity=0.152 Sum_probs=16.0
Q ss_pred CCcEEEEeCc--eEEEEeCCCC
Q 042680 203 DGNVYVFANN--RSVVHDPKAN 222 (530)
Q Consensus 203 ~G~lfv~Gg~--~~e~yDp~tn 222 (530)
||++++.|+. ...+||..++
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECTT
T ss_pred CCCEEEEEcCCCeEEEEecCCC
Confidence 5888888874 5789999875
No 146
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=81.90 E-value=14 Score=39.46 Aligned_cols=145 Identities=12% Similarity=0.121 Sum_probs=74.6
Q ss_pred EecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccc
Q 042680 200 LLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLG 277 (530)
Q Consensus 200 llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~ 277 (530)
..|||++++.|+ ..+.+||..+++....+..-. .+.....+...-+... .+++.+++|+.+
T Consensus 198 fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~--~~~~~h~~~V~~v~~s--------pdg~~l~s~s~D------- 260 (611)
T 1nr0_A 198 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS--LKNVAHSGSVFGLTWS--------PDGTKIASASAD------- 260 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTT--SSSCSSSSCEEEEEEC--------TTSSEEEEEETT-------
T ss_pred ECCCCCEEEEEECCCcEEEEECCCCcEeeeecccc--ccccccCCCEEEEEEC--------CCCCEEEEEeCC-------
Confidence 457999999887 468899999887664442100 0010111111111112 267888888764
Q ss_pred cccccccccCCcEEEEEcCCCCCcceec-CCCCc-cccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCC
Q 042680 278 EEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAP-RTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAP 355 (530)
Q Consensus 278 ~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~-R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~ 355 (530)
.++..+|+.. .+.... .+... ......+. .+++.++.++.+ | ...+||+.+.
T Consensus 261 ----------~~v~lWd~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~s~d-~------------~i~~~~~~~~ 314 (611)
T 1nr0_A 261 ----------KTIKIWNVAT--LKVEKTIPVGTRIEDQQLGII-WTKQALVSISAN-G------------FINFVNPELG 314 (611)
T ss_dssp ----------SEEEEEETTT--TEEEEEEECCSSGGGCEEEEE-ECSSCEEEEETT-C------------CEEEEETTTT
T ss_pred ----------CeEEEEeCCC--CceeeeecCCCCccceeEEEE-EcCCEEEEEeCC-C------------cEEEEeCCCC
Confidence 2345566642 333222 22111 11112233 378888877654 1 4678998876
Q ss_pred CCCceEEecCCCCCCcccccceecCCCeEEEcCCCCC
Q 042680 356 EGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 356 ~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~ 392 (530)
+-...-.-.... -.....-|||+.++.|+...
T Consensus 315 ---~~~~~~~gh~~~--v~~l~~spdg~~l~s~s~D~ 346 (611)
T 1nr0_A 315 ---SIDQVRYGHNKA--ITALSSSADGKTLFSADAEG 346 (611)
T ss_dssp ---EEEEEECCCSSC--EEEEEECTTSSEEEEEETTS
T ss_pred ---CcceEEcCCCCC--EEEEEEeCCCCEEEEEeCCC
Confidence 432211110001 11223458999999998643
No 147
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=81.64 E-value=10 Score=38.09 Aligned_cols=136 Identities=20% Similarity=0.197 Sum_probs=72.4
Q ss_pred CCcEEEEe-CceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccccc
Q 042680 203 DGNVYVFA-NNRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEEEK 281 (530)
Q Consensus 203 ~G~lfv~G-g~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~ 281 (530)
.++++++| ++.+.+||..+++..+.+ .+.+ ...+ =.++-+ . .+++.+++|+.+
T Consensus 115 ~~n~lAvgld~tV~lWd~~tg~~~~~~-~~~~-~~~~---V~sv~f--s--------pdg~~lasgs~D----------- 168 (420)
T 4gga_A 115 SGNVLAVALDNSVYLWSASSGDILQLL-QMEQ-PGEY---ISSVAW--I--------KEGNYLAVGTSS----------- 168 (420)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEE-ECCS-TTCC---EEEEEE--C--------TTSSEEEEEETT-----------
T ss_pred CCCEEEEEeCCEEEEEECCCCCEEEEE-EecC-CCCc---EEEEEE--C--------CCCCEEEEEECC-----------
Confidence 45566665 578999999999876433 2221 1111 112211 1 268889998865
Q ss_pred cccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCce
Q 042680 282 RFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRF 360 (530)
Q Consensus 282 ~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~W 360 (530)
.++..+|+.. .+-... .-...| ..++ -.|+++++.|+... ...+||...... ..
T Consensus 169 ------g~v~iWd~~~--~~~~~~~~~h~~~--v~~~-s~~~~~l~sgs~d~-------------~i~~~d~~~~~~-~~ 223 (420)
T 4gga_A 169 ------AEVQLWDVQQ--QKRLRNMTSHSAR--VGSL-SWNSYILSSGSRSG-------------HIHHHDVRVAEH-HV 223 (420)
T ss_dssp ------SCEEEEETTT--TEEEEEECCCSSC--EEEE-EEETTEEEEEETTS-------------EEEEEETTSSSC-EE
T ss_pred ------CeEEEEEcCC--CcEEEEEeCCCCc--eEEE-eeCCCEEEEEeCCC-------------ceeEeeecccce-ee
Confidence 1356677653 221111 222233 2233 35899999887651 466788766511 11
Q ss_pred EEecCCCCCCcccccceecCCCeEEEcCCCCC
Q 042680 361 AELAPTDIPRMYHSVANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 361 t~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~ 392 (530)
..+... ..........++|+.++.|++..
T Consensus 224 ~~~~~h---~~~~~~~~~~~~g~~l~s~~~D~ 252 (420)
T 4gga_A 224 ATLSGH---SQEVCGLRWAPDGRHLASGGNDN 252 (420)
T ss_dssp EEEECC---SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEeccc---ccceeeeeecCCCCeeeeeeccc
Confidence 112111 11112334567899988888654
No 148
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=81.61 E-value=8.7 Score=38.05 Aligned_cols=30 Identities=17% Similarity=0.324 Sum_probs=23.3
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREF 228 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~ 228 (530)
...|||+.++.|+. .+.+||..+++....+
T Consensus 146 ~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~ 177 (357)
T 4g56_B 146 SVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY 177 (357)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 34579999998874 6889999999876444
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=81.53 E-value=36 Score=32.05 Aligned_cols=23 Identities=17% Similarity=0.144 Sum_probs=15.1
Q ss_pred EEEecCCc-EEEEeC--ceEEEEeCC
Q 042680 198 VYLLPDGN-VYVFAN--NRSVVHDPK 220 (530)
Q Consensus 198 ~~llp~G~-lfv~Gg--~~~e~yDp~ 220 (530)
+...++|+ ||+.+. ....+||..
T Consensus 89 ~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEcCCCCEEEEEecCCCeEEEEECC
Confidence 34567888 555553 458889984
No 150
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=81.42 E-value=18 Score=36.38 Aligned_cols=136 Identities=14% Similarity=0.089 Sum_probs=75.6
Q ss_pred eEEEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcc
Q 042680 197 FVYLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGL 274 (530)
Q Consensus 197 ~~~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~ 274 (530)
...+.++|++++.|+ ....+||..+.+....+..- ..+ -.++.+ . .+++.+++|+.+
T Consensus 273 v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-----~~~--v~~~~~--~--------~~~~~l~sg~~d---- 331 (464)
T 3v7d_B 273 VRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH-----TDR--IYSTIY--D--------HERKRCISASMD---- 331 (464)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC-----SSC--EEEEEE--E--------TTTTEEEEEETT----
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-----CCC--EEEEEE--c--------CCCCEEEEEeCC----
Confidence 334567899888886 46889999998866444211 111 111111 1 256778887754
Q ss_pred ccccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 275 YLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 275 ~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
..+..+|+.. .+-.. .+.........+.+ +++.+++|+.+ | ++.+||..+
T Consensus 332 -------------g~i~vwd~~~--~~~~~-~~~~h~~~v~~~~~-~~~~l~s~s~d-g------------~v~vwd~~~ 381 (464)
T 3v7d_B 332 -------------TTIRIWDLEN--GELMY-TLQGHTALVGLLRL-SDKFLVSAAAD-G------------SIRGWDAND 381 (464)
T ss_dssp -------------SCEEEEETTT--TEEEE-EECCCSSCEEEEEE-CSSEEEEEETT-S------------EEEEEETTT
T ss_pred -------------CcEEEEECCC--CcEEE-EEeCCCCcEEEEEE-cCCEEEEEeCC-C------------cEEEEECCC
Confidence 1356677653 21111 22222223344544 78888888765 1 578999987
Q ss_pred CCCCceEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 355 PEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 355 ~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
. +-.... .... ......+-+||+++++|+
T Consensus 382 ~---~~~~~~--~~~~-~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 382 Y---SRKFSY--HHTN-LSAITTFYVSDNILVSGS 410 (464)
T ss_dssp C---CEEEEE--ECTT-CCCEEEEEECSSEEEEEE
T ss_pred C---ceeeee--cCCC-CccEEEEEeCCCEEEEec
Confidence 6 322111 1111 122345568999999987
No 151
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=81.23 E-value=64 Score=34.76 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=37.1
Q ss_pred ceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCC-c-ccccceecCCCeEEEcCCCC
Q 042680 314 ADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPR-M-YHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 314 ~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R-~-yHS~a~LLpdGrVlv~GG~~ 391 (530)
..... |||+.+++.....+. ....+.++|+.+. +...+-...... . ........|||++++.++..
T Consensus 290 ~~~~~-pDg~~l~~~~~~~~~--------~~~~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 357 (741)
T 2ecf_A 290 ARVNW-RDPQHLSFQRQSRDQ--------KKLDLVEVTLASN---QQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERT 357 (741)
T ss_dssp EEEEE-EETTEEEEEEEETTS--------SEEEEEEEETTTC---CEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTT
T ss_pred EEEEe-CCCCEEEEEEecccC--------CeEEEEEEECCCC---ceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCC
Confidence 34455 999988876543211 1236788999887 655432221111 0 11234456999988777643
No 152
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=80.88 E-value=70 Score=35.03 Aligned_cols=132 Identities=10% Similarity=0.070 Sum_probs=68.4
Q ss_pred cCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccc
Q 042680 202 PDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEE 279 (530)
Q Consensus 202 p~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~ 279 (530)
.+|+|++.++ ....+||+.++++. .+.. ....... .-.+++. + .++.|.+.. ..
T Consensus 481 ~~g~lWi~~~t~~Gl~~~d~~~~~~~-~~~~-~~~~~~~--~~~~i~~--------d--~~g~lWigt-~~--------- 536 (758)
T 3ott_A 481 NEGNVWVLLYNNKGIDKINPRTREVT-KLFA-DELTGEK--SPNYLLC--------D--EDGLLWVGF-HG--------- 536 (758)
T ss_dssp TTSCEEEEETTCSSEEEEETTTTEEE-EECT-TTSCGGG--CEEEEEE--------C--TTSCEEEEE-TT---------
T ss_pred CCCCEEEEccCCCCcEEEeCCCCceE-EecC-CCcCCCc--ccceEEE--------C--CCCCEEEEe-cC---------
Confidence 4799998544 46789999999987 4421 1000010 0112211 1 368888642 11
Q ss_pred cccccccCCcEEEEEcCCCCCcceec---CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCC
Q 042680 280 EKRFVNALDDCARMVVTSPNPEWKIE---KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPE 356 (530)
Q Consensus 280 ~~~~~~a~~s~~~~dp~~~~~~W~~~---~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~ 356 (530)
-..+|||.. .+++.. .++... ..+++-.+|+|++... .| ..+|||++.
T Consensus 537 ---------Gl~~~~~~~--~~~~~~~~~gl~~~~--i~~i~~~~g~lWi~t~--~G-------------l~~~~~~~~- 587 (758)
T 3ott_A 537 ---------GVMRINPKD--ESQQSISFGSFSNNE--ILSMTCVKNSIWVSTT--NG-------------LWIIDRKTM- 587 (758)
T ss_dssp ---------EEEEECC----CCCCBCCCCC---CC--EEEEEEETTEEEEEES--SC-------------EEEEETTTC-
T ss_pred ---------ceEEEecCC--CceEEecccCCCccc--eEEEEECCCCEEEECC--CC-------------eEEEcCCCc-
Confidence 145677753 444321 344322 2233446899888542 22 468999998
Q ss_pred CCceEEecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 357 GQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 357 g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
++.... ++.. ...+.+....||++|++|-+
T Consensus 588 --~~~~~~-~~~~-~~~~~~~~~~~G~l~fG~~~ 617 (758)
T 3ott_A 588 --DARQQN-MTNK-RFTSLLFDPKEDCVYLGGAD 617 (758)
T ss_dssp --CEEEC---CCC-CCSEEEEETTTTEEEEECBS
T ss_pred --eeEEec-CCCC-ceeeeEEECCCCcEEEecCC
Confidence 776532 1111 12233444579999998864
No 153
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=80.71 E-value=19 Score=35.15 Aligned_cols=140 Identities=10% Similarity=0.018 Sum_probs=75.2
Q ss_pred EecCC-cEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 200 LLPDG-NVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 200 llp~G-~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
..++| ++++.|+. .+.+||..+++....+. ..+. ..+..+ ....| .+++++++|+.+
T Consensus 81 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~h--~~~v~~-~~~~~----------~~~~~l~s~~~d------ 140 (383)
T 3ei3_B 81 WHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ-GMGP--GDAITG-MKFNQ----------FNTNQLFVSSIR------ 140 (383)
T ss_dssp ECSSCTTEEEEEEBTSCEEEEETTSTTCEEEEC-CCST--TCBEEE-EEEET----------TEEEEEEEEETT------
T ss_pred ECCCCCCEEEEEcCCCeEEEEeCCCcccceeee-cCCc--CCceeE-EEeCC----------CCCCEEEEEeCC------
Confidence 34688 88888874 68999999887663332 1111 111111 11111 156888888754
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-C-CCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-K-MPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~-M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
..+..+|+.. ...... . -.......+...-|||+.+++|+.+ | .+.+||...
T Consensus 141 -----------~~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~------------~i~i~d~~~ 194 (383)
T 3ei3_B 141 -----------GATTLRDFSG--SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST-G------------RLLLLGLDG 194 (383)
T ss_dssp -----------TEEEEEETTS--CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT-S------------EEEEEETTS
T ss_pred -----------CEEEEEECCC--CceEEEeccCCCCCCeEEEEECCCCCEEEEECCC-C------------CEEEEECCC
Confidence 1245566652 222221 1 1111122344556899999998765 1 578999853
Q ss_pred CCCCceEEecCCCCCCcccccceecCCCe-EEEcCCCC
Q 042680 355 PEGQRFAELAPTDIPRMYHSVANLLPDGK-VFVGGSND 391 (530)
Q Consensus 355 ~~g~~Wt~la~~~~~R~yHS~a~LLpdGr-Vlv~GG~~ 391 (530)
. ....+.... ..-......|+++ ++++|+..
T Consensus 195 ~---~~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 195 H---EIFKEKLHK---AKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp C---EEEEEECSS---SCEEEEEECSSCTTEEEEEETT
T ss_pred C---EEEEeccCC---CcEEEEEECCCCCCEEEEEeCC
Confidence 3 443332111 1112234568998 88888753
No 154
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=80.62 E-value=22 Score=34.76 Aligned_cols=143 Identities=10% Similarity=0.056 Sum_probs=72.4
Q ss_pred EecCCcEEEEeCc--eEEEEeCCC----CeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCc
Q 042680 200 LLPDGNVYVFANN--RSVVHDPKA----NKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREG 273 (530)
Q Consensus 200 llp~G~lfv~Gg~--~~e~yDp~t----n~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~ 273 (530)
..++|++++.|+. ...+||..+ .+-...+.. . ..+... ....| .+++++++|+.+ +
T Consensus 75 ~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~---h--~~~v~~-~~~~~----------~~~~~l~s~~~d-g- 136 (416)
T 2pm9_A 75 WSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSN---H--SSSVKT-VKFNA----------KQDNVLASGGNN-G- 136 (416)
T ss_dssp ECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCC---S--SSCCCE-EEECS----------SSTTBEEEECSS-S-
T ss_pred ECCCCCeEEEEccCCeEEEeecccccccccchhhccC---C--ccceEE-EEEcC----------CCCCEEEEEcCC-C-
Confidence 3579998888863 688999987 222223321 1 111111 12211 136778888754 1
Q ss_pred cccccccccccccCCcEEEEEcCCCC------Ccceec-CCCCccccceeeeecC-CeEEEEcCCCCCCCCcccCCCCCc
Q 042680 274 LYLGEEEKRFVNALDDCARMVVTSPN------PEWKIE-KMPAPRTMADGVLLPN-GEVLIINGADLGSGGWHCADKPSL 345 (530)
Q Consensus 274 ~~~~~~~~~~~~a~~s~~~~dp~~~~------~~W~~~-~M~~~R~~~~~vvLpd-G~VlViGG~~~g~~g~~~~~~p~~ 345 (530)
.+..+|+.... ...... .......-.+....|+ ++++++++.+ |
T Consensus 137 ---------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g------------ 188 (416)
T 2pm9_A 137 ---------------EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-N------------ 188 (416)
T ss_dssp ---------------CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-S------------
T ss_pred ---------------eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-C------------
Confidence 23445554311 111111 1112222334455577 7899988765 1
Q ss_pred ccEEecCCCCCCCceEEecCCCCC----CcccccceecCCC-eEEEcCCCC
Q 042680 346 KPMLYRPNAPEGQRFAELAPTDIP----RMYHSVANLLPDG-KVFVGGSND 391 (530)
Q Consensus 346 ~~eiYDP~t~~g~~Wt~la~~~~~----R~yHS~a~LLpdG-rVlv~GG~~ 391 (530)
.+.+||..+. +-...-..... ...-......||| +++++|+..
T Consensus 189 ~v~iwd~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 236 (416)
T 2pm9_A 189 FASIWDLKAK---KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS 236 (416)
T ss_dssp CEEEEETTTT---EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC
T ss_pred CEEEEECCCC---CcceEEeccccccccCCceEEEEECCCCCCEEEEEECC
Confidence 5789999887 54322222111 1111223456787 578877754
No 155
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=80.22 E-value=24 Score=34.35 Aligned_cols=31 Identities=13% Similarity=0.154 Sum_probs=22.6
Q ss_pred EEEecCCcEEEEeCc--eEEEEeCCCCeEEEEcc
Q 042680 198 VYLLPDGNVYVFANN--RSVVHDPKANKIIREFP 229 (530)
Q Consensus 198 ~~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p 229 (530)
+...++| +++.|+. ...+||..+++....+.
T Consensus 192 ~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~ 224 (397)
T 1sq9_A 192 VDISERG-LIATGFNNGTVQISELSTLRPLYNFE 224 (397)
T ss_dssp EEECTTS-EEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred EEECCCc-eEEEEeCCCcEEEEECCCCceeEEEe
Confidence 3455788 8888764 68899999988765554
No 156
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=79.85 E-value=41 Score=31.73 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=22.6
Q ss_pred cEEEEEcCC-CCCcceecCCCCccccceeeeec-CCeEEEEcCCC
Q 042680 289 DCARMVVTS-PNPEWKIEKMPAPRTMADGVLLP-NGEVLIINGAD 331 (530)
Q Consensus 289 s~~~~dp~~-~~~~W~~~~M~~~R~~~~~vvLp-dG~VlViGG~~ 331 (530)
.+..||... .................+....| ||+.+++|+..
T Consensus 171 ~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 171 QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETT
T ss_pred eEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecC
Confidence 356678763 22222222222222233445567 89999998864
No 157
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=79.14 E-value=44 Score=31.62 Aligned_cols=58 Identities=17% Similarity=0.132 Sum_probs=36.2
Q ss_pred eeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceE-EecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 315 DGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFA-ELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 315 ~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt-~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
+...-|||+.+++|+.+ | .+.+||..+. +-. .+. .....-.....-|||+.+++||..
T Consensus 278 ~~~~sp~~~~l~s~~~d-g------------~i~iwd~~~~---~~~~~~~---~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 278 GIAFHPVHGTLATVGSD-G------------RFSFWDKDAR---TKLKTSE---QLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp EEEECTTTCCEEEEETT-S------------CEEEEETTTT---EEEEECC---CCSSCEEEEEECTTSSCEEEEECC
T ss_pred EEEEecCCCEEEEEccC-C------------eEEEEECCCC---cEEEEec---CCCCCceEEEECCCCCeEEEEecc
Confidence 34556899999999865 1 5789998765 322 221 111111223456899999988864
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=78.72 E-value=43 Score=31.33 Aligned_cols=32 Identities=22% Similarity=0.403 Sum_probs=21.6
Q ss_pred EEEecCCc-EEEEe-------------CceEEEEeCCCCeEEEEcc
Q 042680 198 VYLLPDGN-VYVFA-------------NNRSVVHDPKANKIIREFP 229 (530)
Q Consensus 198 ~~llp~G~-lfv~G-------------g~~~e~yDp~tn~w~~~~p 229 (530)
+...+||+ ||+.. .....+||..+++..+.++
T Consensus 87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 132 (337)
T 1pby_B 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE 132 (337)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE
T ss_pred eEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe
Confidence 34567885 55542 3678899999988765443
No 159
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=78.32 E-value=20 Score=38.77 Aligned_cols=140 Identities=18% Similarity=0.202 Sum_probs=73.2
Q ss_pred EEecCCcEEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
...++|++++.|+ ..+.+||..+++-.+.+.. . ..+. .++.+ . .+++.+++|+.+.
T Consensus 437 ~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~---h--~~~v--~~~~~--s--------~~~~~l~s~s~D~----- 494 (694)
T 3dm0_A 437 VLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG---H--TKDV--LSVAF--S--------LDNRQIVSASRDR----- 494 (694)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC---C--SSCE--EEEEE--C--------TTSSCEEEEETTS-----
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCcceeEEeC---C--CCCE--EEEEE--e--------CCCCEEEEEeCCC-----
Confidence 4557999999987 4688999999876544321 1 1110 11111 1 2567778877641
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-CCCCccc-cceeeeecCC--eEEEEcCCCCCCCCcccCCCCCcccEEecC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRT-MADGVLLPNG--EVLIINGADLGSGGWHCADKPSLKPMLYRP 352 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~-~~~~vvLpdG--~VlViGG~~~g~~g~~~~~~p~~~~eiYDP 352 (530)
++..+|... ...+... .....+. -.+....|++ ..++.|+.+. ++.+||.
T Consensus 495 ------------~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-------------~v~vwd~ 548 (694)
T 3dm0_A 495 ------------TIKLWNTLG-ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK-------------TVKVWNL 548 (694)
T ss_dssp ------------CEEEECTTS-CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS-------------CEEEEET
T ss_pred ------------EEEEEECCC-CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC-------------eEEEEEC
Confidence 233444321 1112221 1111111 1222334665 5677776541 5789998
Q ss_pred CCCCCCceEE-ecCCCCCCcccccceecCCCeEEEcCCCCC
Q 042680 353 NAPEGQRFAE-LAPTDIPRMYHSVANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 353 ~t~~g~~Wt~-la~~~~~R~yHS~a~LLpdGrVlv~GG~~~ 392 (530)
.+. +... +.. . ...-....+-|||+.++.||...
T Consensus 549 ~~~---~~~~~~~~-h--~~~v~~v~~spdg~~l~sg~~Dg 583 (694)
T 3dm0_A 549 SNC---KLRSTLAG-H--TGYVSTVAVSPDGSLCASGGKDG 583 (694)
T ss_dssp TTC---CEEEEECC-C--SSCEEEEEECTTSSEEEEEETTS
T ss_pred CCC---cEEEEEcC-C--CCCEEEEEEeCCCCEEEEEeCCC
Confidence 876 4332 211 1 11112334568999999998643
No 160
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=78.31 E-value=18 Score=35.90 Aligned_cols=143 Identities=13% Similarity=0.082 Sum_probs=72.3
Q ss_pred EEecCCcEEEEeC----ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcc
Q 042680 199 YLLPDGNVYVFAN----NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGL 274 (530)
Q Consensus 199 ~llp~G~lfv~Gg----~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~ 274 (530)
...|||++++++. ....+||+.+.+....+. -. ... . ....- .+++.+++|+.+
T Consensus 140 ~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~--~~V---~-~v~fs-----------pdg~~l~s~s~~---- 197 (365)
T 4h5i_A 140 YISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TR--GEV---K-DLHFS-----------TDGKVVAYITGS---- 197 (365)
T ss_dssp EECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CS--SCC---C-EEEEC-----------TTSSEEEEECSS----
T ss_pred EEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CC--Cce---E-EEEEc-----------cCCceEEeccce----
Confidence 3458999887643 357899999998764442 11 111 1 12221 267888776532
Q ss_pred ccccccccccccCCcEEEEEcCCCCCcceec-CCC-CccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecC
Q 042680 275 YLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMP-APRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRP 352 (530)
Q Consensus 275 ~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~-~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP 352 (530)
...+++... .+.... ... ...........|||+.++.++...+. ......||.
T Consensus 198 --------------~~~~~~~~~--~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~---------~~~i~~~~~ 252 (365)
T 4h5i_A 198 --------------SLEVISTVT--GSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK---------GIVLTKISI 252 (365)
T ss_dssp --------------CEEEEETTT--CCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC---------CEEEEEEEE
T ss_pred --------------eEEEEEecc--CcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc---------eeEEeeccc
Confidence 133455432 222221 111 11112233446999999998765211 123456666
Q ss_pred CCCCCCceEEecCCCCCC--cccccceecCCCeEEEcCCCC
Q 042680 353 NAPEGQRFAELAPTDIPR--MYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 353 ~t~~g~~Wt~la~~~~~R--~yHS~a~LLpdGrVlv~GG~~ 391 (530)
... ............ ..-.+...-|||+.++.|+.+
T Consensus 253 ~~~---~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D 290 (365)
T 4h5i_A 253 KSG---NTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND 290 (365)
T ss_dssp ETT---EEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT
T ss_pred ccc---eecceeeeeecCCCCCeEeEEECCCCCceEEEcCC
Confidence 555 443221111111 001122346899999999864
No 161
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=78.14 E-value=49 Score=33.32 Aligned_cols=25 Identities=12% Similarity=0.108 Sum_probs=17.5
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCe
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANK 223 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~ 223 (530)
...++|+.+++|+. ...+||..+.+
T Consensus 156 ~~sp~~~~l~~~~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 156 SIAEDDTTVIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTSCC
T ss_pred EEcCCCCEEEEEeCCCcEEEEecCCcc
Confidence 34579998888864 46677776654
No 162
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=77.67 E-value=20 Score=35.14 Aligned_cols=75 Identities=16% Similarity=0.323 Sum_probs=44.2
Q ss_pred CCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCC--cccccc
Q 042680 299 NPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPR--MYHSVA 376 (530)
Q Consensus 299 ~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R--~yHS~a 376 (530)
...|+....+..+....++..++|++|+++.. | ...+.+ ++.|++|+.+.....+. ..++++
T Consensus 193 G~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~--G------------~~~~s~--~D~G~tW~~~~~~~~~~~~~~~~v~ 256 (327)
T 2xbg_A 193 QTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNG--G------------KIAFSD--PDNSENWGELLSPLRRNSVGFLDLA 256 (327)
T ss_dssp CSSCEEEECCSSSCEEEEEECTTSCEEEEETT--T------------EEEEEE--TTEEEEECCCBCTTSSCCSCEEEEE
T ss_pred CCceeECCCCCCCccceeEECCCCCEEEEeCC--c------------eEEEec--CCCCCeeEeccCCcccCCcceEEEE
Confidence 46798764444555666667799999987742 1 122222 34467998764321222 233333
Q ss_pred eecCCCeEEEcCCC
Q 042680 377 NLLPDGKVFVGGSN 390 (530)
Q Consensus 377 ~LLpdGrVlv~GG~ 390 (530)
..+++++|++|++
T Consensus 257 -~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 257 -YRTPNEVWLAGGA 269 (327)
T ss_dssp -ESSSSCEEEEEST
T ss_pred -ecCCCEEEEEeCC
Confidence 3468999998874
No 163
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=76.58 E-value=28 Score=34.08 Aligned_cols=76 Identities=20% Similarity=0.357 Sum_probs=43.9
Q ss_pred CCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCccccc
Q 042680 296 TSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSV 375 (530)
Q Consensus 296 ~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~ 375 (530)
.+...+|+....+...........++|+++++|-. |. +|--...-|.+|+.+.. ..++..+++
T Consensus 148 ~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~--G~--------------~~~S~d~gG~tW~~~~~-~~~~~~~~~ 210 (327)
T 2xbg_A 148 KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSR--GS--------------FYSTWEPGQTAWEPHNR-TTSRRLHNM 210 (327)
T ss_dssp SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETT--SS--------------EEEEECTTCSSCEEEEC-CSSSCEEEE
T ss_pred cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECC--Cc--------------EEEEeCCCCCceeECCC-CCCCcccee
Confidence 34457798763333334455566789998887632 10 12111111458998743 334555655
Q ss_pred ceecCCCeEEEcCC
Q 042680 376 ANLLPDGKVFVGGS 389 (530)
Q Consensus 376 a~LLpdGrVlv~GG 389 (530)
+ ..++|++|+++.
T Consensus 211 ~-~~~~g~~~~~~~ 223 (327)
T 2xbg_A 211 G-FTPDGRLWMIVN 223 (327)
T ss_dssp E-ECTTSCEEEEET
T ss_pred E-ECCCCCEEEEeC
Confidence 5 468999998875
No 164
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=76.47 E-value=18 Score=35.07 Aligned_cols=23 Identities=9% Similarity=0.068 Sum_probs=16.7
Q ss_pred CCcEEEEeCc--eEEEEeCCCCeEE
Q 042680 203 DGNVYVFANN--RSVVHDPKANKII 225 (530)
Q Consensus 203 ~G~lfv~Gg~--~~e~yDp~tn~w~ 225 (530)
++++++.|+. ...+||..+++..
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSSSCCC
T ss_pred CCcEEEEEcCCCeEEEEeCCCccee
Confidence 5567777763 5789999887644
No 165
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=76.41 E-value=48 Score=30.62 Aligned_cols=46 Identities=15% Similarity=0.244 Sum_probs=24.8
Q ss_pred EEEEeCCCCcEEEccccCCcccccceeccCCcEEEccCCeEEEeccCCCCcEEEE
Q 042680 101 SIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDAFSYEYV 155 (530)
Q Consensus 101 ~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~~s~E~y 155 (530)
..+||..+++....-........+.. ..+||+.+++|+.++ .+.+|
T Consensus 41 v~vw~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~dg-~i~~~ 86 (313)
T 3odt_A 41 VRLWSKDDQWLGTVVYTGQGFLNSVC--------YDSEKELLLFGGKDT-MINGV 86 (313)
T ss_dssp EEEEEESSSEEEEEEEECSSCEEEEE--------EETTTTEEEEEETTS-CEEEE
T ss_pred EEEEECCCCEEEEEeecCCccEEEEE--------ECCCCCEEEEecCCC-eEEEE
Confidence 56777766554333222222222222 345889999988764 45555
No 166
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=75.93 E-value=22 Score=34.55 Aligned_cols=29 Identities=10% Similarity=0.182 Sum_probs=22.3
Q ss_pred EecCCcEEEEeC--ceEEEEeCCCCeEEEEc
Q 042680 200 LLPDGNVYVFAN--NRSVVHDPKANKIIREF 228 (530)
Q Consensus 200 llp~G~lfv~Gg--~~~e~yDp~tn~w~~~~ 228 (530)
..++|++++.|+ ..+.+||..+++..+.+
T Consensus 84 ~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 114 (343)
T 2xzm_R 84 LSQENCFAISSSWDKTLRLWDLRTGTTYKRF 114 (343)
T ss_dssp ECSSTTEEEEEETTSEEEEEETTSSCEEEEE
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 457899988887 46889999998765444
No 167
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=75.08 E-value=12 Score=37.79 Aligned_cols=55 Identities=15% Similarity=0.226 Sum_probs=37.2
Q ss_pred CCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 321 NGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 321 dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
||+.++.++.+ | ++-+||.++. ....+........+......-+||+++++|+..
T Consensus 176 ~~~~l~s~s~D-~------------~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d 230 (435)
T 4e54_B 176 NTNQFYASSME-G------------TTRLQDFKGN---ILRVFASSDTINIWFCSLDVSASSRMVVTGDNV 230 (435)
T ss_dssp CTTEEEEECSS-S------------CEEEEETTSC---EEEEEECCSSCSCCCCCEEEETTTTEEEEECSS
T ss_pred CCCEEEEEeCC-C------------EEEEeeccCC---ceeEEeccCCCCccEEEEEECCCCCEEEEEeCC
Confidence 78899988865 1 5789999877 666554443333333333456899999999864
No 168
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=74.88 E-value=1.1e+02 Score=33.81 Aligned_cols=27 Identities=15% Similarity=0.193 Sum_probs=22.2
Q ss_pred EEecCCcEEEEeCceEEEEeCCCCeEE
Q 042680 199 YLLPDGNVYVFANNRSVVHDPKANKII 225 (530)
Q Consensus 199 ~llp~G~lfv~Gg~~~e~yDp~tn~w~ 225 (530)
....+|+|++.......+||+.++++.
T Consensus 137 ~~d~~g~lwi~t~~gl~~~~~~~~~~~ 163 (795)
T 4a2l_A 137 EEISPEQLLISTPEGLIMFDIKESKFI 163 (795)
T ss_dssp EEEETTEEEEEETTEEEEEETTTTEEE
T ss_pred EECCCCCEEEEECCceEEEECCCCEEE
Confidence 344689999988878889999999876
No 169
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=74.35 E-value=63 Score=30.97 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=48.6
Q ss_pred cEEEEEcCCCC-Ccceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCC
Q 042680 289 DCARMVVTSPN-PEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPT 366 (530)
Q Consensus 289 s~~~~dp~~~~-~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~ 366 (530)
.+.+|++.... ..++.. .++.+ .++.+-++|+|||......... . .......+.+|||+.. ....+...
T Consensus 208 ~I~~~~~~~~~~~~~~~~~~~~gP---~gi~~d~~G~l~va~~~~~~~~--~-~~~~~~~v~~~d~~G~---~~~~~~~~ 278 (322)
T 2fp8_A 208 QIVKYWLEGPKKGTAEVLVKIPNP---GNIKRNADGHFWVSSSEELDGN--M-HGRVDPKGIKFDEFGN---ILEVIPLP 278 (322)
T ss_dssp EEEEEESSSTTTTCEEEEEECSSE---EEEEECTTSCEEEEEEEETTSS--T-TSCEEEEEEEECTTSC---EEEEEECC
T ss_pred eEEEEECCCCcCCccceEEeCCCC---CCeEECCCCCEEEEecCccccc--c-cCCCccEEEEECCCCC---EEEEEECC
Confidence 45677775311 223222 23222 2344557899999864310000 0 0000124678999644 44444321
Q ss_pred CCCCcccccceecCCCeEEEcCCCCCCCCccccCCCCcceEEEEcCCC
Q 042680 367 DIPRMYHSVANLLPDGKVFVGGSNDNDGYFEFAKFPTELRLEKFTPPY 414 (530)
Q Consensus 367 ~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~~~~~t~~~vE~y~Ppy 414 (530)
.-....+-+.+...+|++||+.... .+|.+|++.-
T Consensus 279 ~g~~~~~~~~~~~~~g~L~v~~~~~-------------~~i~~~~~~~ 313 (322)
T 2fp8_A 279 PPFAGEHFEQIQEHDGLLYIGTLFH-------------GSVGILVYDK 313 (322)
T ss_dssp TTTTTSCCCEEEEETTEEEEECSSC-------------SEEEEEEC--
T ss_pred CCCccccceEEEEeCCEEEEeecCC-------------CceEEEeccc
Confidence 1000122233444699999986532 2567776653
No 170
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=73.97 E-value=45 Score=32.94 Aligned_cols=24 Identities=17% Similarity=0.127 Sum_probs=17.9
Q ss_pred EEecCCcEEEEeC-ceEEEEeCCCC
Q 042680 199 YLLPDGNVYVFAN-NRSVVHDPKAN 222 (530)
Q Consensus 199 ~llp~G~lfv~Gg-~~~e~yDp~tn 222 (530)
...++|++++.|. ....+||..+.
T Consensus 184 ~~~~~~~~l~s~~d~~i~iwd~~~~ 208 (447)
T 3dw8_B 184 SINSDYETYLSADDLRINLWHLEIT 208 (447)
T ss_dssp EECTTSSEEEEECSSEEEEEETTEE
T ss_pred EEcCCCCEEEEeCCCeEEEEECCCC
Confidence 4457999999885 35789999843
No 171
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=73.75 E-value=60 Score=30.45 Aligned_cols=25 Identities=12% Similarity=0.053 Sum_probs=17.2
Q ss_pred CcEEEEeC--ceEEEEeCCCCeEEEEc
Q 042680 204 GNVYVFAN--NRSVVHDPKANKIIREF 228 (530)
Q Consensus 204 G~lfv~Gg--~~~e~yDp~tn~w~~~~ 228 (530)
..+++.|+ ....+||..+.+....+
T Consensus 185 ~~~~~s~~~d~~i~i~d~~~~~~~~~~ 211 (340)
T 4aow_A 185 NPIIVSCGWDKLVKVWNLANCKLKTNH 211 (340)
T ss_dssp SCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CcEEEEEcCCCEEEEEECCCCceeeEe
Confidence 45666665 35789999999876444
No 172
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=71.45 E-value=77 Score=31.86 Aligned_cols=141 Identities=13% Similarity=0.145 Sum_probs=71.8
Q ss_pred EEecCCcEEEEeC-----ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcE-EEEecCccCC
Q 042680 199 YLLPDGNVYVFAN-----NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAE-VLICGGSVRE 272 (530)
Q Consensus 199 ~llp~G~lfv~Gg-----~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gk-I~v~GG~~~~ 272 (530)
...|||+.++++. ....+||..+++.. .+...++ .. ..... .| +++ |++.+..+ +
T Consensus 185 ~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~--~~----~~~~~---sp--------dg~~la~~~~~~-g 245 (415)
T 2hqs_A 185 AWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPR--HN----GAPAF---SP--------DGSKLAFALSKT-G 245 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSS--CE----EEEEE---CT--------TSSEEEEEECTT-S
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCC--cc----cCEEE---cC--------CCCEEEEEEecC-C
Confidence 4568998777764 26789999998876 4433221 01 11222 22 565 44344322 1
Q ss_pred ccccccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecC
Q 042680 273 GLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRP 352 (530)
Q Consensus 273 ~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP 352 (530)
...+.++|+.. .+.....- ..........-|||+.++++....| .....+||.
T Consensus 246 --------------~~~i~~~d~~~--~~~~~l~~-~~~~~~~~~~spdg~~l~~~s~~~g----------~~~i~~~d~ 298 (415)
T 2hqs_A 246 --------------SLNLYVMDLAS--GQIRQVTD-GRSNNTEPTWFPDSQNLAFTSDQAG----------RPQVYKVNI 298 (415)
T ss_dssp --------------SCEEEEEETTT--CCEEECCC-CSSCEEEEEECTTSSEEEEEECTTS----------SCEEEEEET
T ss_pred --------------CceEEEEECCC--CCEEeCcC-CCCcccceEECCCCCEEEEEECCCC----------CcEEEEEEC
Confidence 12356677653 33322211 1111223344589997766653211 124567788
Q ss_pred CCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 353 NAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 353 ~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.+. +-..+... . .+......-|||+.++.++..
T Consensus 299 ~~~---~~~~l~~~--~-~~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 299 NGG---APQRITWE--G-SQNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp TSS---CCEECCCS--S-SEEEEEEECTTSSEEEEEEEC
T ss_pred CCC---CEEEEecC--C-CcccCeEECCCCCEEEEEECc
Confidence 776 44333211 1 122234556999988877643
No 173
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=70.84 E-value=9 Score=36.02 Aligned_cols=102 Identities=13% Similarity=0.168 Sum_probs=55.7
Q ss_pred CcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCcccc-ceeeeec--CCeEEEEcCCCCCCC
Q 042680 260 DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTM-ADGVLLP--NGEVLIINGADLGSG 335 (530)
Q Consensus 260 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~-~~~vvLp--dG~VlViGG~~~g~~ 335 (530)
+++.+++|+.+ ..+..+|.......|+.. .+...... .+....| ||+.+++|+.+ |
T Consensus 22 ~~~~l~~~~~d-----------------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-g-- 81 (351)
T 3f3f_A 22 YGRHVATCSSD-----------------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-K-- 81 (351)
T ss_dssp SSSEEEEEETT-----------------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-S--
T ss_pred CCCEEEEeeCC-----------------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-C--
Confidence 67788887754 135567765433444443 22211112 2223335 69999999865 1
Q ss_pred CcccCCCCCcccEEecCCCCC----CCceEEecCCCCCCcccccceecCC--CeEEEcCCCC
Q 042680 336 GWHCADKPSLKPMLYRPNAPE----GQRFAELAPTDIPRMYHSVANLLPD--GKVFVGGSND 391 (530)
Q Consensus 336 g~~~~~~p~~~~eiYDP~t~~----g~~Wt~la~~~~~R~yHS~a~LLpd--GrVlv~GG~~ 391 (530)
++.+||..+.. +.+|..+.........-......|+ ++.+++|+..
T Consensus 82 ----------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 133 (351)
T 3f3f_A 82 ----------TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND 133 (351)
T ss_dssp ----------CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ----------eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC
Confidence 57788887652 2345444333322222223445678 8888888753
No 174
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=70.31 E-value=30 Score=33.54 Aligned_cols=20 Identities=10% Similarity=0.157 Sum_probs=15.7
Q ss_pred CCcEEEEeCc--eEEEEeCCCC
Q 042680 203 DGNVYVFANN--RSVVHDPKAN 222 (530)
Q Consensus 203 ~G~lfv~Gg~--~~e~yDp~tn 222 (530)
||++++.|+. .+.+||..+.
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~ 59 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEE 59 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSS
T ss_pred CCCEEEEEcCCCEEEEEECCcC
Confidence 8899998874 6788888654
No 175
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=70.27 E-value=40 Score=34.93 Aligned_cols=143 Identities=13% Similarity=0.019 Sum_probs=74.7
Q ss_pred EEecCCc-EEEEeC--ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCC-cEEEEecCccCCcc
Q 042680 199 YLLPDGN-VYVFAN--NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVD-AEVLICGGSVREGL 274 (530)
Q Consensus 199 ~llp~G~-lfv~Gg--~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~-gkI~v~GG~~~~~~ 274 (530)
...++|+ +++.|+ ....+||..+.+....+..-. ....+.. ..... .+ ++.+++|+.+
T Consensus 167 ~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~--~~~~~v~-~~~~~-----------~~~~~~l~~~~~d---- 228 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH--KQGSFVR-DVEFS-----------PDSGEFVITVGSD---- 228 (615)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS--CTTCCEE-EEEEC-----------STTCCEEEEEETT----
T ss_pred EECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC--CCCceEE-EEEEC-----------CCCCCEEEEEeCC----
Confidence 3457886 777766 468899999887664443211 0000111 11121 25 7888888764
Q ss_pred ccccccccccccCCcEEEEEcCCCCCcceecCC-----CCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEE
Q 042680 275 YLGEEEKRFVNALDDCARMVVTSPNPEWKIEKM-----PAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPML 349 (530)
Q Consensus 275 ~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M-----~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~ei 349 (530)
..+..+|+.. .+... .+ .....-.+.... +|+.+++++.+ | .+.+
T Consensus 229 -------------g~i~vwd~~~--~~~~~-~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d-~------------~i~~ 278 (615)
T 1pgu_A 229 -------------RKISCFDGKS--GEFLK-YIEDDQEPVQGGIFALSWL-DSQKFATVGAD-A------------TIRV 278 (615)
T ss_dssp -------------CCEEEEETTT--CCEEE-ECCBTTBCCCSCEEEEEES-SSSEEEEEETT-S------------EEEE
T ss_pred -------------CeEEEEECCC--CCEeE-EecccccccCCceEEEEEc-CCCEEEEEcCC-C------------cEEE
Confidence 1355677653 22211 12 222222232333 89999988864 1 5789
Q ss_pred ecCCCCCCCceEE-ecCCCCCCcccccceecCCCeEEEcCCCCC
Q 042680 350 YRPNAPEGQRFAE-LAPTDIPRMYHSVANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 350 YDP~t~~g~~Wt~-la~~~~~R~yHS~a~LLpdGrVlv~GG~~~ 392 (530)
||..+. +... +.....+......++..++++.+++|+...
T Consensus 279 wd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 319 (615)
T 1pgu_A 279 WDVTTS---KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 319 (615)
T ss_dssp EETTTT---EEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTS
T ss_pred EECCCC---cEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCC
Confidence 999876 4332 221111111222344456888888887543
No 176
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=70.25 E-value=44 Score=34.35 Aligned_cols=138 Identities=12% Similarity=0.087 Sum_probs=75.4
Q ss_pred cceEEEe-c--CCcEEEEeC-ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcE-EEEecCc
Q 042680 195 YPFVYLL-P--DGNVYVFAN-NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAE-VLICGGS 269 (530)
Q Consensus 195 Yp~~~ll-p--~G~lfv~Gg-~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gk-I~v~GG~ 269 (530)
+|...++ | +|+||+.-. ....++|+.++++....+. -..|. +-++ . .+++ ||++.-.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~-----~~~P~-~ia~----d--------~~G~~lyvad~~ 199 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSG-----LSKVR-TICW----T--------HEADSMIITNDQ 199 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECC-----CSCEE-EEEE----C--------TTSSEEEEEECC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecC-----CCCcc-eEEE----e--------CCCCEEEEEeCC
Confidence 4654443 3 589999854 6778999999988733321 12231 2222 1 1454 8888543
Q ss_pred cCCccccccccccccccCCcEEEEEcCCCCCcce---ec-CCCCccccceeeeec-CCeEEEEcCCCCCCCCcccCCCCC
Q 042680 270 VREGLYLGEEEKRFVNALDDCARMVVTSPNPEWK---IE-KMPAPRTMADGVLLP-NGEVLIINGADLGSGGWHCADKPS 344 (530)
Q Consensus 270 ~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~---~~-~M~~~R~~~~~vvLp-dG~VlViGG~~~g~~g~~~~~~p~ 344 (530)
. +. ....+..+++. ..|. .. .+..+ ++.++-| +|+||+..-..
T Consensus 200 ~-~~------------~~~~v~~~~~~---g~~~~~~~l~~~~~p---~giavdp~~g~lyv~d~~~------------- 247 (430)
T 3tc9_A 200 N-NN------------DRPNNYILTRE---SGFKVITELTKGQNC---NGAETHPINGELYFNSWNA------------- 247 (430)
T ss_dssp S-CT------------TSEEEEEEEGG---GTSCSEEEEEECSSC---CCEEECTTTCCEEEEETTT-------------
T ss_pred C-Cc------------ccceEEEEeCC---CceeeeeeeccCCCc---eEEEEeCCCCEEEEEECCC-------------
Confidence 2 10 01124445543 3443 11 33333 3445567 89999976321
Q ss_pred cccEEecCCCCCCCceEEec---CCCCCCcccccceecCCCe-EEEcCC
Q 042680 345 LKPMLYRPNAPEGQRFAELA---PTDIPRMYHSVANLLPDGK-VFVGGS 389 (530)
Q Consensus 345 ~~~eiYDP~t~~g~~Wt~la---~~~~~R~yHS~a~LLpdGr-Vlv~GG 389 (530)
..+..||+.+. ..+.+. ....|| -.++-|||+ +||+-.
T Consensus 248 ~~V~~~~~~~~---~~~~~~~~~~~~~P~----gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 248 GQVFRYDFTTQ---ETTPLFTIQDSGWEF----HIQFHPSGNYAYIVVV 289 (430)
T ss_dssp TEEEEEETTTT---EEEEEEECSSSSCCE----EEEECTTSSEEEEEET
T ss_pred CEEEEEECCCC---cEEEEEEcCCCCcce----eEEEcCCCCEEEEEEC
Confidence 26889999876 543332 222233 244568998 899854
No 177
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=69.94 E-value=77 Score=30.24 Aligned_cols=112 Identities=14% Similarity=0.154 Sum_probs=59.6
Q ss_pred cceEEEe-cCCcEEEEe--CceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccC
Q 042680 195 YPFVYLL-PDGNVYVFA--NNRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVR 271 (530)
Q Consensus 195 Yp~~~ll-p~G~lfv~G--g~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~ 271 (530)
+|...+. ++|+||+.- +....+||+.+.. ...+. .++ .| .+.++ . .++++||+.....
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~~-~~~----~p-~gia~----~--------~dG~l~vad~~~~ 93 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHAT-VEG----KV-SGLAF----T--------SNGDLVATGWNAD 93 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEEE-CSS----EE-EEEEE----C--------TTSCEEEEEECTT
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEEe-CCC----Cc-eeEEE----c--------CCCcEEEEeccCC
Confidence 4554444 799999985 4678899998753 32222 221 22 12222 1 2678888753210
Q ss_pred CccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEe
Q 042680 272 EGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLY 350 (530)
Q Consensus 272 ~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiY 350 (530)
. ..+.+||+.+ .+.+.. ..+..|.....+..+++++|+..-.. ..+.++
T Consensus 94 ~---------------~~v~~~d~~~--g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~-------------g~i~~~ 143 (306)
T 2p4o_A 94 S---------------IPVVSLVKSD--GTVETLLTLPDAIFLNGITPLSDTQYLTADSYR-------------GAIWLI 143 (306)
T ss_dssp S---------------CEEEEEECTT--SCEEEEEECTTCSCEEEEEESSSSEEEEEETTT-------------TEEEEE
T ss_pred c---------------ceEEEEcCCC--CeEEEEEeCCCccccCcccccCCCcEEEEECCC-------------CeEEEE
Confidence 0 1245666543 444433 34444433333445677788765211 156788
Q ss_pred cCCCC
Q 042680 351 RPNAP 355 (530)
Q Consensus 351 DP~t~ 355 (530)
|+.+.
T Consensus 144 d~~~~ 148 (306)
T 2p4o_A 144 DVVQP 148 (306)
T ss_dssp ETTTT
T ss_pred eCCCC
Confidence 88765
No 178
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=68.86 E-value=29 Score=34.56 Aligned_cols=27 Identities=15% Similarity=0.268 Sum_probs=21.1
Q ss_pred cCCcEEEEeCc--eEEEEeCCCCeEEEEc
Q 042680 202 PDGNVYVFANN--RSVVHDPKANKIIREF 228 (530)
Q Consensus 202 p~G~lfv~Gg~--~~e~yDp~tn~w~~~~ 228 (530)
++|++++.|+. ...+||..+++....+
T Consensus 180 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 180 EEKSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp SSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 57999988874 6889999998766444
No 179
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=68.64 E-value=20 Score=35.17 Aligned_cols=102 Identities=6% Similarity=-0.053 Sum_probs=60.2
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccc
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYL 276 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~ 276 (530)
....++.||+..|. ....+|+++++..+.+ ++. +.+ |.++.+ .+++||+....+
T Consensus 60 L~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~--~~F---geGit~-----------~g~~Ly~ltw~~------ 115 (268)
T 3nok_A 60 LVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLG--NIF---AEGLAS-----------DGERLYQLTWTE------ 115 (268)
T ss_dssp EEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECT--TCC---EEEEEE-----------CSSCEEEEESSS------
T ss_pred EEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC--Ccc---eeEEEE-----------eCCEEEEEEccC------
Confidence 34458899999886 4788999999887666 552 222 322211 367999974322
Q ss_pred ccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCC-eEEEEcCCCCCCCCcccCCCCCcccEEecCCC
Q 042680 277 GEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNG-EVLIINGADLGSGGWHCADKPSLKPMLYRPNA 354 (530)
Q Consensus 277 ~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG-~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t 354 (530)
+.+..||+.+ -+.. ..+.+- .+-++. +|| ++|+..|.. +...+||++
T Consensus 116 -----------~~v~V~D~~T----l~~~~ti~~~~-eGwGLt-~Dg~~L~vSdGs~--------------~l~~iDp~T 164 (268)
T 3nok_A 116 -----------GLLFTWSGMP----PQRERTTRYSG-EGWGLC-YWNGKLVRSDGGT--------------MLTFHEPDG 164 (268)
T ss_dssp -----------CEEEEEETTT----TEEEEEEECSS-CCCCEE-EETTEEEEECSSS--------------EEEEECTTT
T ss_pred -----------CEEEEEECCc----CcEEEEEeCCC-ceeEEe-cCCCEEEEECCCC--------------EEEEEcCCC
Confidence 3466788753 2221 222221 223333 455 577776632 577899998
Q ss_pred C
Q 042680 355 P 355 (530)
Q Consensus 355 ~ 355 (530)
.
T Consensus 165 ~ 165 (268)
T 3nok_A 165 F 165 (268)
T ss_dssp C
T ss_pred C
Confidence 7
No 180
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=67.78 E-value=34 Score=31.72 Aligned_cols=135 Identities=8% Similarity=-0.005 Sum_probs=67.8
Q ss_pred cCCcEEEEeCc--eEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccccccc
Q 042680 202 PDGNVYVFANN--RSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGEE 279 (530)
Q Consensus 202 p~G~lfv~Gg~--~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~ 279 (530)
++|+.++.|+. ...+||..+++....+..-. .+.. ..... .+++.+++|+.+ +
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~-----~~v~-~~~~~-----------~~~~~l~~~~~d-g------- 81 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQ-----GFLN-SVCYD-----------SEKELLLFGGKD-T------- 81 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEECS-----SCEE-EEEEE-----------TTTTEEEEEETT-S-------
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCC-----ccEE-EEEEC-----------CCCCEEEEecCC-C-------
Confidence 78888888764 58899998887653332111 1111 11121 267788888764 1
Q ss_pred cccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCC
Q 042680 280 EKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQ 358 (530)
Q Consensus 280 ~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~ 358 (530)
.+..++..+. ...+.. .+.........+.. +++.+++++.+ | .+.+||....
T Consensus 82 ---------~i~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d-~------------~i~~~d~~~~--- 134 (313)
T 3odt_A 82 ---------MINGVPLFAT-SGEDPLYTLIGHQGNVCSLSF-QDGVVISGSWD-K------------TAKVWKEGSL--- 134 (313)
T ss_dssp ---------CEEEEETTCC-TTSCC-CEECCCSSCEEEEEE-ETTEEEEEETT-S------------EEEEEETTEE---
T ss_pred ---------eEEEEEeeec-CCCCcccchhhcccCEEEEEe-cCCEEEEEeCC-C------------CEEEEcCCcE---
Confidence 2345665431 112211 22222222333444 78888888765 1 5778883222
Q ss_pred ceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 359 RFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 359 ~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.... .... ..-.+.+..-++++.+++|+..
T Consensus 135 ~~~~-~~~~--~~v~~~~~~~~~~~~l~~~~~d 164 (313)
T 3odt_A 135 VYNL-QAHN--ASVWDAKVVSFSENKFLTASAD 164 (313)
T ss_dssp EEEE-ECCS--SCEEEEEEEETTTTEEEEEETT
T ss_pred EEec-ccCC--CceeEEEEccCCCCEEEEEECC
Confidence 2222 1111 1111222232388888888753
No 181
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=67.73 E-value=77 Score=29.29 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=18.6
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCe
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANK 223 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~ 223 (530)
...++|+.++.|+. .+.+||..+++
T Consensus 157 ~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 157 RWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp EECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred EEcCCCCEEEEEecCcceeEEECCCCc
Confidence 44568888888764 57889988754
No 182
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=67.15 E-value=20 Score=34.06 Aligned_cols=94 Identities=16% Similarity=0.079 Sum_probs=50.4
Q ss_pred CcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCe-EEEEcCCCCCCCCc
Q 042680 260 DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGE-VLIINGADLGSGGW 337 (530)
Q Consensus 260 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~-VlViGG~~~g~~g~ 337 (530)
++++|++++.+ ..+.++|+.. .+.... ..+....-.....-|||+ +|+.+...
T Consensus 10 ~~~~~v~~~~~-----------------~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~------ 64 (349)
T 1jmx_B 10 GHEYMIVTNYP-----------------NNLHVVDVAS--DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY------ 64 (349)
T ss_dssp TCEEEEEEETT-----------------TEEEEEETTT--TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT------
T ss_pred CCEEEEEeCCC-----------------CeEEEEECCC--CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC------
Confidence 67888887643 2466788753 333222 333211233445568997 66665422
Q ss_pred ccCCCCCcccEEecCCCCCCCceEEecCCCC-----CCcccccceecCCCeEEEcCC
Q 042680 338 HCADKPSLKPMLYRPNAPEGQRFAELAPTDI-----PRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 338 ~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~-----~R~yHS~a~LLpdGrVlv~GG 389 (530)
.++.+||+.+. +....-.... ...-++ ..+-|||+.+++++
T Consensus 65 -------~~i~~~d~~t~---~~~~~~~~~~~~~~~~~~~~~-~~~spdg~~l~~~~ 110 (349)
T 1jmx_B 65 -------GDIYGIDLDTC---KNTFHANLSSVPGEVGRSMYS-FAISPDGKEVYATV 110 (349)
T ss_dssp -------TEEEEEETTTT---EEEEEEESCCSTTEEEECSSC-EEECTTSSEEEEEE
T ss_pred -------CcEEEEeCCCC---cEEEEEEcccccccccccccc-eEECCCCCEEEEEc
Confidence 15789999887 5432211111 111122 34568998766665
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=66.59 E-value=84 Score=29.31 Aligned_cols=30 Identities=13% Similarity=0.211 Sum_probs=20.3
Q ss_pred eeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEe
Q 042680 316 GVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAEL 363 (530)
Q Consensus 316 ~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~l 363 (530)
+..-+||+|||..+ . .+.+|||+.. ....+
T Consensus 223 i~~d~~G~l~v~~~-~--------------~v~~~~~~g~---~~~~~ 252 (296)
T 3e5z_A 223 LRVDAGGLIWASAG-D--------------GVHVLTPDGD---ELGRV 252 (296)
T ss_dssp EEEBTTSCEEEEET-T--------------EEEEECTTSC---EEEEE
T ss_pred EEECCCCCEEEEcC-C--------------eEEEECCCCC---EEEEE
Confidence 34558999999872 1 4679999744 55544
No 184
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=65.67 E-value=35 Score=34.47 Aligned_cols=140 Identities=11% Similarity=0.089 Sum_probs=69.9
Q ss_pred EEecCCcEE-EEeC--ceEEEEeCC--CCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCc
Q 042680 199 YLLPDGNVY-VFAN--NRSVVHDPK--ANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREG 273 (530)
Q Consensus 199 ~llp~G~lf-v~Gg--~~~e~yDp~--tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~ 273 (530)
...++|+.+ +.|+ ..+.+||.. +++..+.+... ..+..-.++.+ . .+++.+++|+.+ +
T Consensus 109 ~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~-----~~~~~v~~~~~--s--------p~~~~l~~~~~~-g- 171 (450)
T 2vdu_B 109 RLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF-----CFSKRPNAISI--A--------EDDTTVIIADKF-G- 171 (450)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE-----ECSSCEEEEEE--C--------TTSSEEEEEETT-S-
T ss_pred EEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc-----cCCCCceEEEE--c--------CCCCEEEEEeCC-C-
Confidence 345799875 6775 468899988 66544333210 00000112211 1 257777887643 1
Q ss_pred cccccccccccccCCcEEEEEcCCCCCccee--c-CCC-CccccceeeeecC---CeEEEEcCCCCCCCCcccCCCCCcc
Q 042680 274 LYLGEEEKRFVNALDDCARMVVTSPNPEWKI--E-KMP-APRTMADGVLLPN---GEVLIINGADLGSGGWHCADKPSLK 346 (530)
Q Consensus 274 ~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~--~-~M~-~~R~~~~~vvLpd---G~VlViGG~~~g~~g~~~~~~p~~~ 346 (530)
.+..++... .+... . .+. ....-.+...-|| |+.++.|+.+ + +
T Consensus 172 ---------------~v~~~~~~~--~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-~------------~ 221 (450)
T 2vdu_B 172 ---------------DVYSIDINS--IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-E------------H 221 (450)
T ss_dssp ---------------EEEEEETTS--CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-S------------C
T ss_pred ---------------cEEEEecCC--cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-C------------c
Confidence 244566543 11111 0 111 1111223445689 9999998764 1 5
Q ss_pred cEEecCCCCCCCceE-EecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 347 PMLYRPNAPEGQRFA-ELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 347 ~eiYDP~t~~g~~Wt-~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
+.+||..+. +.. .+-.-.... -.+ ..+- ||+.++.|+..
T Consensus 222 i~vwd~~~~---~~~~~~~~~h~~~-v~~-~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 222 IKISHYPQC---FIVDKWLFGHKHF-VSS-ICCG-KDYLLLSAGGD 261 (450)
T ss_dssp EEEEEESCT---TCEEEECCCCSSC-EEE-EEEC-STTEEEEEESS
T ss_pred EEEEECCCC---ceeeeeecCCCCc-eEE-EEEC-CCCEEEEEeCC
Confidence 788998766 322 111001011 112 2233 89999998854
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=65.40 E-value=22 Score=34.00 Aligned_cols=98 Identities=7% Similarity=0.021 Sum_probs=51.4
Q ss_pred CcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCccccceeeeecCCeEEEEcCCCCCCCCcc
Q 042680 260 DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPRTMADGVLLPNGEVLIINGADLGSGGWH 338 (530)
Q Consensus 260 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~ 338 (530)
+++||+++..+ ..+.+||+.. .++... .....+ -.+.+.-+||++||.......
T Consensus 55 ~g~l~~~~~~~-----------------~~i~~~d~~~--~~~~~~~~~~~~~-~~~i~~~~dg~l~v~~~~~~~----- 109 (333)
T 2dg1_A 55 QGQLFLLDVFE-----------------GNIFKINPET--KEIKRPFVSHKAN-PAAIKIHKDGRLFVCYLGDFK----- 109 (333)
T ss_dssp TSCEEEEETTT-----------------CEEEEECTTT--CCEEEEEECSSSS-EEEEEECTTSCEEEEECTTSS-----
T ss_pred CCCEEEEECCC-----------------CEEEEEeCCC--CcEEEEeeCCCCC-cceEEECCCCcEEEEeCCCCC-----
Confidence 67888876532 1355677653 444332 111111 223344489999987643200
Q ss_pred cCCCCCcccEEecCCCCCCCceEE-ecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 339 CADKPSLKPMLYRPNAPEGQRFAE-LAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 339 ~~~~p~~~~eiYDP~t~~g~~Wt~-la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
....+.+||+++. +... +....... ......+-+||++|++...
T Consensus 110 ----~~~~i~~~d~~~~---~~~~~~~~~~~~~-~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 110 ----STGGIFAATENGD---NLQDIIEDLSTAY-CIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp ----SCCEEEEECTTSC---SCEEEECSSSSCC-CEEEEEECTTSCEEEEECC
T ss_pred ----CCceEEEEeCCCC---EEEEEEccCccCC-cccceEECCCCCEEEEecc
Confidence 0125678999887 6552 22111111 1122345689999997653
No 186
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=65.14 E-value=9.1 Score=36.53 Aligned_cols=55 Identities=20% Similarity=0.321 Sum_probs=32.2
Q ss_pred CCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCC--CeEEEcCCCC
Q 042680 321 NGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPD--GKVFVGGSND 391 (530)
Q Consensus 321 dG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpd--GrVlv~GG~~ 391 (530)
+|++++.|+.+. ++.+||..+. +|..+.........-.....-|+ |+++++|+..
T Consensus 66 ~g~~l~s~s~D~-------------~v~iWd~~~~---~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d 122 (297)
T 2pm7_B 66 FGTILASCSYDG-------------KVMIWKEENG---RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD 122 (297)
T ss_dssp GCSEEEEEETTT-------------EEEEEEBSSS---CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cCCEEEEEcCCC-------------EEEEEEcCCC---ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC
Confidence 489999988651 6789999877 66533222111111112334465 7888888753
No 187
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=64.07 E-value=1.4e+02 Score=33.67 Aligned_cols=25 Identities=20% Similarity=0.234 Sum_probs=17.8
Q ss_pred CcEEEEeC--ceEEEEeCCCCeEEEEc
Q 042680 204 GNVYVFAN--NRSVVHDPKANKIIREF 228 (530)
Q Consensus 204 G~lfv~Gg--~~~e~yDp~tn~w~~~~ 228 (530)
|+.++.|+ ..+.+||..+++....+
T Consensus 69 g~~L~S~s~D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 69 GIYLVVINAKDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp TTEEEEEETTCEEEEEETTTCSEEEEE
T ss_pred CCEEEEEECcCeEEEEECCCCcEEEEE
Confidence 77666654 46889999988765444
No 188
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=63.59 E-value=45 Score=31.77 Aligned_cols=69 Identities=16% Similarity=0.260 Sum_probs=36.8
Q ss_pred ceeeeecCCeEEEEc---CCCCCCCCcc-cCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCe-EEEcC
Q 042680 314 ADGVLLPNGEVLIIN---GADLGSGGWH-CADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGK-VFVGG 388 (530)
Q Consensus 314 ~~~vvLpdG~VlViG---G~~~g~~g~~-~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGr-Vlv~G 388 (530)
.+.++-+||+||+.. |......+.. ....+...+.+|||++. +++.+..... -.+ .++-|||+ +|++.
T Consensus 134 ~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g---~~~~~~~~~~---p~g-l~~spdg~~lyv~~ 206 (305)
T 3dr2_A 134 NDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS---PLQRMADLDH---PNG-LAFSPDEQTLYVSQ 206 (305)
T ss_dssp CCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC---CCEEEEEESS---EEE-EEECTTSSEEEEEE
T ss_pred CCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC---cEEEEecCCC---Ccc-eEEcCCCCEEEEEe
Confidence 345667999999973 2210000000 00111235788999888 7776542111 123 34568997 77765
Q ss_pred C
Q 042680 389 S 389 (530)
Q Consensus 389 G 389 (530)
.
T Consensus 207 ~ 207 (305)
T 3dr2_A 207 T 207 (305)
T ss_dssp C
T ss_pred c
Confidence 4
No 189
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=62.21 E-value=40 Score=34.28 Aligned_cols=168 Identities=11% Similarity=0.099 Sum_probs=0.0
Q ss_pred cCCccceEEEecCCcEEEE--------eCceEEEEeCCCC--eEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCC-
Q 042680 191 ENNLYPFVYLLPDGNVYVF--------ANNRSVVHDPKAN--KIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPV- 259 (530)
Q Consensus 191 ~~~~Yp~~~llp~G~lfv~--------Gg~~~e~yDp~tn--~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~- 259 (530)
+...||..+.++||.|+++ +.....+|--..+ +|. ++..+....-.+.....-.++-+ .
T Consensus 26 ~~~~yp~~v~L~dG~LLa~~~~~~~~~~~~~~~v~rS~DgG~TW~-~~~~v~~~~~g~~~~~~P~l~~l---------P~ 95 (367)
T 2ydt_A 26 PQVLYARPLELSDGTLLGTWENYSPEPPNVWFPIVKSKDGGKTWK-EISKVKDTQNNWGLRYQPQLYEL---------PR 95 (367)
T ss_dssp TSEEEEEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTTSSCE-EEEEECCCSSSSCEEEEEEEEEC---------SS
T ss_pred CCCCceeEEEcCCCCEEEEEEeccCCCCCeEEEEEEECCCCcCcC-cCcccCCCCCCcccccCCeEEEc---------cc
Q ss_pred ------CcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceecCC-----------CCccccceeeeecCC
Q 042680 260 ------DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKM-----------PAPRTMADGVLLPNG 322 (530)
Q Consensus 260 ------~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M-----------~~~R~~~~~vvLpdG 322 (530)
+++||+.+-..... .....+..+.-+|...+|+...- -..+.+--.+++.+|
T Consensus 96 ~i~~~~~G~lL~~~~s~~~d-----------~~~~~i~v~~S~D~G~TW~~~~~i~~g~~~~~~~g~~~v~eP~~~~~~G 164 (367)
T 2ydt_A 96 AFGKYPKGTVLCSGSSIPSD-----------LSETLIEVYASRDKGYTWEFVSHVALGGEALPNPGLTPVWEPFLMTYKE 164 (367)
T ss_dssp CBTTBCTTCEEEEEEECCTT-----------CCCEEEEEEEESSSSSCCEEEEEEEEESCSSCCTTCCCEEEEEEEEETT
T ss_pred cccccCCCcEEEEEecccCC-----------CCCCeEEEEEECCCCCCCcCCeecccCCCcccccCCCccccceEECCCC
Q ss_pred eEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEec-----CCCCCCcccccceecCCCeEEEc
Q 042680 323 EVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELA-----PTDIPRMYHSVANLLPDGKVFVG 387 (530)
Q Consensus 323 ~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la-----~~~~~R~yHS~a~LLpdGrVlv~ 387 (530)
++++.--...+....+ +....--.+| |++|+... .....|.....++-|+||+++++
T Consensus 165 ~l~v~~~d~~~~~~~~-------q~l~~~~S~D-G~TWs~~~~~~~~~~~~~rpg~p~v~~l~dG~l~~~ 226 (367)
T 2ydt_A 165 KLILYYSDQRDNATHS-------QKLVHQTTTD-LKKWSKVVDDTKYANYYARPGMPTVAKLPNNEYIYV 226 (367)
T ss_dssp EEEEEEEECCSTTTCS-------SEEEEEEESS-SSSCCCCEEEECCSSTTCEEEEEEEEECTTSCEEEE
T ss_pred cEEEEECCCCCCCCCC-------cEEEEEECCC-CCCCCCceeccccCCcCCCCCcceEEECCCCcEEEE
No 190
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=62.12 E-value=81 Score=32.39 Aligned_cols=140 Identities=9% Similarity=0.097 Sum_probs=73.2
Q ss_pred cceEEEe-c---CCcEEEEeC-ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCc
Q 042680 195 YPFVYLL-P---DGNVYVFAN-NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGS 269 (530)
Q Consensus 195 Yp~~~ll-p---~G~lfv~Gg-~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~ 269 (530)
.|...++ + +|+||+.-. ....++|+.+++.......+ ..|. +.++ . .+++||++--.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~-----~~P~-giav----d--------~dG~lyVad~~ 201 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNI-----GQCA-DVNF----T--------LNGDMVVVDDQ 201 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCC-----SCEE-EEEE----C--------TTCCEEEEECC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCC-----CCcc-EEEE----C--------CCCCEEEEcCC
Confidence 4665444 4 399999843 67889999999887333211 2231 2222 1 25678888432
Q ss_pred cCCccccccccccccccCCcEEEEEcCCCCCcce---ec-CCCCccccceeeeec-CCeEEEEcCCCCCCCCcccCCCCC
Q 042680 270 VREGLYLGEEEKRFVNALDDCARMVVTSPNPEWK---IE-KMPAPRTMADGVLLP-NGEVLIINGADLGSGGWHCADKPS 344 (530)
Q Consensus 270 ~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~---~~-~M~~~R~~~~~vvLp-dG~VlViGG~~~g~~g~~~~~~p~ 344 (530)
... ....+..+++. ..|. .. .+..+ .+.++-| +|+|||..-..
T Consensus 202 ~~~-------------~~~gv~~~~~~---~~~~~~~~~~~~~~P---~giavd~~~G~lyv~d~~~------------- 249 (433)
T 4hw6_A 202 SSD-------------TNTGIYLFTRA---SGFTERLSLCNARGA---KTCAVHPQNGKIYYTRYHH------------- 249 (433)
T ss_dssp SCT-------------TSEEEEEECGG---GTTCCEEEEEECSSB---CCCEECTTTCCEEECBTTC-------------
T ss_pred CCc-------------ccceEEEEECC---CCeeccccccccCCC---CEEEEeCCCCeEEEEECCC-------------
Confidence 100 01123334432 3333 11 23333 3345557 89999865321
Q ss_pred cccEEecCCCCCCCce-EEec-CCCCCCcccccceecCCCe-EEEcCC
Q 042680 345 LKPMLYRPNAPEGQRF-AELA-PTDIPRMYHSVANLLPDGK-VFVGGS 389 (530)
Q Consensus 345 ~~~eiYDP~t~~g~~W-t~la-~~~~~R~yHS~a~LLpdGr-Vlv~GG 389 (530)
..+.+|||.+. +. +.+. ....+..+ . .++-|||+ +||+=.
T Consensus 250 ~~V~~~d~~~g---~~~~~~~~~~~~~~~~-~-ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 250 AMISSYDPATG---TLTEEEVMMDTKGSNF-H-IVWHPTGDWAYIIYN 292 (433)
T ss_dssp SEEEEECTTTC---CEEEEEEECSCCSSCE-E-EEECTTSSEEEEEET
T ss_pred CEEEEEECCCC---eEEEEEeccCCCCCcc-c-EEEeCCCCEEEEEeC
Confidence 25789999866 44 2221 11112111 2 34558887 888754
No 191
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=61.76 E-value=50 Score=31.73 Aligned_cols=159 Identities=11% Similarity=0.065 Sum_probs=74.1
Q ss_pred ceEEEe-c-CCcEEEEe-CceEEEEeCCCCeEEEEccCCCCC-CCccCCCceEeeccCCCCCCCCCCC-CcEEEEecCcc
Q 042680 196 PFVYLL-P-DGNVYVFA-NNRSVVHDPKANKIIREFPQLPGG-ARSYPATGTSVLLPLYLPRDTYKPV-DAEVLICGGSV 270 (530)
Q Consensus 196 p~~~ll-p-~G~lfv~G-g~~~e~yDp~tn~w~~~~p~mp~~-~r~yp~~g~svmlpl~~~~~~~~~~-~gkI~v~GG~~ 270 (530)
|+...+ + +|+|||.- +....+||+.+++.. .+.....+ ...+|. +.++ . . ++.||+.-...
T Consensus 82 p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~-~i~~----d--------~~~G~l~v~d~~~ 147 (322)
T 2fp8_A 82 TYDISYNLQNNQLYIVDCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLY-AVTV----D--------QRTGIVYFTDVST 147 (322)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEECTTCEECE-EEESEETTEECSCEE-EEEE----C--------TTTCCEEEEESCS
T ss_pred CceEEEcCCCCcEEEEECCCCEEEEeCCCCEEE-EecccCCCCcccccc-eEEE----e--------cCCCEEEEECCcc
Confidence 554444 4 79999983 345788999877554 33221111 112221 1121 1 3 57888863221
Q ss_pred CCccccccccccccccCCcEEEEEcCCCCCcceec--CCCCccccceeeeecCCe-EEEEcCCCCCCCCcccCCCCCccc
Q 042680 271 REGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE--KMPAPRTMADGVLLPNGE-VLIINGADLGSGGWHCADKPSLKP 347 (530)
Q Consensus 271 ~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~--~M~~~R~~~~~vvLpdG~-VlViGG~~~g~~g~~~~~~p~~~~ 347 (530)
...................+.+||+.. .+.+.. .+..+. ..++-+||+ +||..-.. ..+
T Consensus 148 ~~~~~~~~~~~~~~~~~g~v~~~d~~~--~~~~~~~~~~~~p~---gia~~~dg~~lyv~d~~~-------------~~I 209 (322)
T 2fp8_A 148 LYDDRGVQQIMDTSDKTGRLIKYDPST--KETTLLLKELHVPG---GAEVSADSSFVLVAEFLS-------------HQI 209 (322)
T ss_dssp SCCTTCHHHHHHHTCCCEEEEEEETTT--TEEEEEEEEESCCC---EEEECTTSSEEEEEEGGG-------------TEE
T ss_pred cccccccceehcccCCCceEEEEeCCC--CEEEEeccCCccCc---ceEECCCCCEEEEEeCCC-------------CeE
Confidence 000000000000000123467788753 333321 222221 234457886 77764321 157
Q ss_pred EEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 348 MLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 348 eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
.+||.....-.+++.+....- -.+. ++-+||+|||+-..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~g---P~gi-~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 210 VKYWLEGPKKGTAEVLVKIPN---PGNI-KRNADGHFWVSSSE 248 (322)
T ss_dssp EEEESSSTTTTCEEEEEECSS---EEEE-EECTTSCEEEEEEE
T ss_pred EEEECCCCcCCccceEEeCCC---CCCe-EECCCCCEEEEecC
Confidence 788887542124444332211 2333 45689999998653
No 192
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=60.85 E-value=99 Score=29.25 Aligned_cols=26 Identities=4% Similarity=-0.069 Sum_probs=19.0
Q ss_pred EEecCCcEEEEe--CceEEEEeCCCCeEE
Q 042680 199 YLLPDGNVYVFA--NNRSVVHDPKANKII 225 (530)
Q Consensus 199 ~llp~G~lfv~G--g~~~e~yDp~tn~w~ 225 (530)
..-++|+||+.. +....+||+. ++..
T Consensus 92 ~~d~dG~l~v~~~~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 92 AVDAQQRLVHCEHGRRAITRSDAD-GQAH 119 (305)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred eECCCCCEEEEECCCCEEEEECCC-CCEE
Confidence 344699999874 3578899997 6554
No 193
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=60.15 E-value=1.4e+02 Score=31.94 Aligned_cols=119 Identities=12% Similarity=0.133 Sum_probs=61.7
Q ss_pred ecCCcEEEEeC--ceEEEEeC-CCCe--EEEEccCCCCCCCccCCC-----ceEeeccCCCCCCCCCCCCcEEEEecCcc
Q 042680 201 LPDGNVYVFAN--NRSVVHDP-KANK--IIREFPQLPGGARSYPAT-----GTSVLLPLYLPRDTYKPVDAEVLICGGSV 270 (530)
Q Consensus 201 lp~G~lfv~Gg--~~~e~yDp-~tn~--w~~~~p~mp~~~r~yp~~-----g~svmlpl~~~~~~~~~~~gkI~v~GG~~ 270 (530)
+.+|+||+... .....+|. ++++ |...+.. +...+.++++ +.++ .+++||+... +
T Consensus 60 v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~~~~~-------------~~~~v~v~~~-d 124 (571)
T 2ad6_A 60 VIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQ-DASTKAVMCCDVVDRGLAY-------------GAGQIVKKQA-N 124 (571)
T ss_dssp EETTEEEEECSTTTCEEEEETTCTTSEEEEECCCC-CGGGGGGCTTCSCCCCCEE-------------ETTEEEEECT-T
T ss_pred EECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCC-CccccccccccccccccEE-------------ECCEEEEEeC-C
Confidence 45999999876 46889999 8875 5532211 1001111111 1111 3677776532 1
Q ss_pred CCccccccccccccccCCcEEEEEcCCCCCcceec-CCC-Cc-cccceeeeecCCeEEEEcCCC-CCCCCcccCCCCCcc
Q 042680 271 REGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMP-AP-RTMADGVLLPNGEVLIINGAD-LGSGGWHCADKPSLK 346 (530)
Q Consensus 271 ~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~-~~-R~~~~~vvLpdG~VlViGG~~-~g~~g~~~~~~p~~~ 346 (530)
..+..+|..+....|+.. .-. .. .....-++ .+|+||+..+.. .+ .-..
T Consensus 125 -----------------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~---------~~g~ 177 (571)
T 2ad6_A 125 -----------------GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELG---------VRGA 177 (571)
T ss_dssp -----------------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGT---------CCCE
T ss_pred -----------------CEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECCEEEEEecCCccC---------CCCE
Confidence 135668877655679865 211 11 12222233 489988754321 00 0125
Q ss_pred cEEecCCCCCCCceEE
Q 042680 347 PMLYRPNAPEGQRFAE 362 (530)
Q Consensus 347 ~eiYDP~t~~g~~Wt~ 362 (530)
+..||+++.. ..|+.
T Consensus 178 v~a~D~~tG~-~~W~~ 192 (571)
T 2ad6_A 178 VNAFDLKTGE-LKWRA 192 (571)
T ss_dssp EEEEETTTCC-EEEEE
T ss_pred EEEEECCCCc-EEEEE
Confidence 7789998761 25764
No 194
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=55.42 E-value=43 Score=31.81 Aligned_cols=78 Identities=18% Similarity=0.132 Sum_probs=43.4
Q ss_pred cEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCC
Q 042680 289 DCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDI 368 (530)
Q Consensus 289 s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~ 368 (530)
.+.+||+.. .+.....++. + -.+.+.-+||+++|..+ . .+.+||+++. +++.+.....
T Consensus 36 ~i~~~d~~~--~~~~~~~~~~-~-~~~i~~~~dG~l~v~~~-~--------------~l~~~d~~~g---~~~~~~~~~~ 93 (297)
T 3g4e_A 36 KVCRWDSFT--KQVQRVTMDA-P-VSSVALRQSGGYVATIG-T--------------KFCALNWKEQ---SAVVLATVDN 93 (297)
T ss_dssp EEEEEETTT--CCEEEEECSS-C-EEEEEEBTTSSEEEEET-T--------------EEEEEETTTT---EEEEEEECCT
T ss_pred EEEEEECCC--CcEEEEeCCC-c-eEEEEECCCCCEEEEEC-C--------------eEEEEECCCC---cEEEEEecCC
Confidence 356788763 2222212221 1 22345568999777532 1 4678999988 8876654321
Q ss_pred --CCcccccceecCCCeEEEcC
Q 042680 369 --PRMYHSVANLLPDGKVFVGG 388 (530)
Q Consensus 369 --~R~yHS~a~LLpdGrVlv~G 388 (530)
+........+-+||++|++-
T Consensus 94 ~~~~~~~~di~~d~dG~l~~~~ 115 (297)
T 3g4e_A 94 DKKNNRFNDGKVDPAGRYFAGT 115 (297)
T ss_dssp TCSSEEEEEEEECTTSCEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEec
Confidence 11111224456899999864
No 195
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=54.68 E-value=1.4e+02 Score=27.84 Aligned_cols=68 Identities=18% Similarity=0.235 Sum_probs=37.6
Q ss_pred ccCCeEEEeccCCCCcEEEE-cCCCCCCCceEEeccccccccccCCCCCCCccccccCCccceEEEecCCcEEEEeC-ce
Q 042680 136 LSDGSFLVYGGRDAFSYEYV-PVEKESNKAAIAFPFLFETQDFLERPGNPKGRFRLENNLYPFVYLLPDGNVYVFAN-NR 213 (530)
Q Consensus 136 L~dG~v~VvGG~~~~s~E~y-P~~~~~~~~~~~~p~l~~t~d~~~~~~~~~~~~~~~~~~Yp~~~llp~G~lfv~Gg-~~ 213 (530)
-+||+.++.|+.++ ++.+| ..+. .....+ ... ..--.+...+++.+++.+. ..
T Consensus 224 s~~~~~l~s~s~Dg-~i~iwd~~~~-----~~~~~~--~~~-----------------~~v~~~~~~~~~~~~~~~~d~~ 278 (340)
T 4aow_A 224 SPDGSLCASGGKDG-QAMLWDLNEG-----KHLYTL--DGG-----------------DIINALCFSPNRYWLCAATGPS 278 (340)
T ss_dssp CTTSSEEEEEETTC-EEEEEETTTT-----EEEEEE--ECS-----------------SCEEEEEECSSSSEEEEEETTE
T ss_pred CCCCCEEEEEeCCC-eEEEEEeccC-----ceeeee--cCC-----------------ceEEeeecCCCCceeeccCCCE
Confidence 46899999998774 56677 4432 111111 100 0001223446777665543 56
Q ss_pred EEEEeCCCCeEEEEc
Q 042680 214 SVVHDPKANKIIREF 228 (530)
Q Consensus 214 ~e~yDp~tn~w~~~~ 228 (530)
..+||..+......+
T Consensus 279 i~iwd~~~~~~~~~~ 293 (340)
T 4aow_A 279 IKIWDLEGKIIVDEL 293 (340)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEECCCCeEEEec
Confidence 789999988765444
No 196
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=54.21 E-value=1.4e+02 Score=27.72 Aligned_cols=17 Identities=18% Similarity=0.227 Sum_probs=12.9
Q ss_pred ceEEEEeCCCCeEEEEc
Q 042680 212 NRSVVHDPKANKIIREF 228 (530)
Q Consensus 212 ~~~e~yDp~tn~w~~~~ 228 (530)
....+||..+++..+.+
T Consensus 11 ~~v~~~d~~~~~~~~~~ 27 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVI 27 (337)
T ss_dssp TEEEEEETTTTEEEEEE
T ss_pred CeEEEEECCCCcEEEEE
Confidence 46788999998876544
No 197
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=54.02 E-value=56 Score=31.88 Aligned_cols=62 Identities=8% Similarity=0.004 Sum_probs=36.7
Q ss_pred eeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCc---------------cc---ccce
Q 042680 316 GVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRM---------------YH---SVAN 377 (530)
Q Consensus 316 ~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~---------------yH---S~a~ 377 (530)
...-|||+.++.++.+. ++.+||...+...++..+...-.++. .+ ....
T Consensus 246 ~~~s~~~~~l~s~s~d~-------------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 312 (355)
T 3vu4_A 246 MKWSTDGSKLAVVSDKW-------------TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIA 312 (355)
T ss_dssp EEECTTSCEEEEEETTC-------------EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEE
T ss_pred EEECCCCCEEEEEECCC-------------EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEE
Confidence 34458999999988651 57788876654334444333211111 11 2334
Q ss_pred ecCCCeEEEcCCC
Q 042680 378 LLPDGKVFVGGSN 390 (530)
Q Consensus 378 LLpdGrVlv~GG~ 390 (530)
.-+||+.+++|+.
T Consensus 313 ~~~d~~~l~~~~~ 325 (355)
T 3vu4_A 313 WISESSLVVVWPH 325 (355)
T ss_dssp ESSSSEEEEEETT
T ss_pred EeCCCCEEEEEeC
Confidence 5688988888875
No 198
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=53.87 E-value=1.4e+02 Score=30.17 Aligned_cols=26 Identities=12% Similarity=0.250 Sum_probs=20.8
Q ss_pred CCcEEEEeC--ceEEEEeCCCCeEEEEc
Q 042680 203 DGNVYVFAN--NRSVVHDPKANKIIREF 228 (530)
Q Consensus 203 ~G~lfv~Gg--~~~e~yDp~tn~w~~~~ 228 (530)
+|.+++.|+ +...+||.++++..+.+
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL 219 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKM 219 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEE
Confidence 678888876 47889999999876555
No 199
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=53.86 E-value=91 Score=30.05 Aligned_cols=61 Identities=8% Similarity=0.065 Sum_probs=35.2
Q ss_pred ceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceE-EecCC--C-CCCcccccceecCCCeEEEcCC
Q 042680 314 ADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFA-ELAPT--D-IPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 314 ~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt-~la~~--~-~~R~yHS~a~LLpdGrVlv~GG 389 (530)
.+....|+| ++++|+.+ | .+.+||..+. +-. .+... . .....-......|||+.+++|+
T Consensus 190 ~~~~~~~~~-~l~~~~~d-g------------~i~i~d~~~~---~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~ 252 (397)
T 1sq9_A 190 TSVDISERG-LIATGFNN-G------------TVQISELSTL---RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 252 (397)
T ss_dssp CEEEECTTS-EEEEECTT-S------------EEEEEETTTT---EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE
T ss_pred eEEEECCCc-eEEEEeCC-C------------cEEEEECCCC---ceeEEEeccccccccCCccceEEECCCCCEEEEEe
Confidence 344556899 88888754 1 5789999876 432 22210 0 0011112234568999999988
Q ss_pred CC
Q 042680 390 ND 391 (530)
Q Consensus 390 ~~ 391 (530)
..
T Consensus 253 ~d 254 (397)
T 1sq9_A 253 DS 254 (397)
T ss_dssp EE
T ss_pred cC
Confidence 53
No 200
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=52.61 E-value=96 Score=28.62 Aligned_cols=26 Identities=15% Similarity=0.284 Sum_probs=18.3
Q ss_pred cCCcEEEEe-CceEEEEeCCCCeEEEEc
Q 042680 202 PDGNVYVFA-NNRSVVHDPKANKIIREF 228 (530)
Q Consensus 202 p~G~lfv~G-g~~~e~yDp~tn~w~~~~ 228 (530)
+++ ++++| ++++.+||..+++..+.+
T Consensus 35 ~~~-~lAvg~D~tV~iWd~~tg~~~~~~ 61 (318)
T 4ggc_A 35 SGN-VLAVALDNSVYLWSASSGDILQLL 61 (318)
T ss_dssp TTS-EEEEEETTEEEEEETTTCCEEEEE
T ss_pred CCC-EEEEEeCCEEEEEECCCCCEEEEE
Confidence 444 66655 468899999999876433
No 201
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=52.17 E-value=1.3e+02 Score=26.92 Aligned_cols=49 Identities=6% Similarity=0.095 Sum_probs=28.7
Q ss_pred eeEEEEeCCCCcEEEccccCCcccccceeccCCcEEEccCCeEEEeccCCCCcEEEE-cCC
Q 042680 99 CHSIFYDYNKNAVKALKVQSDTWCSSGGLSADGRLVMLSDGSFLVYGGRDAFSYEYV-PVE 158 (530)
Q Consensus 99 a~~~~yDp~t~~w~~l~~~~~~~~~~~~~l~dG~l~~L~dG~v~VvGG~~~~s~E~y-P~~ 158 (530)
.....||..+++.+.+...... ..+..+ -+||+.+++++. ..+.+| ..+
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~-v~~~~~--------spdg~~l~~~~~--~~i~~~d~~~ 71 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPEL-FEAPNW--------SPDGKYLLLNSE--GLLYRLSLAG 71 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSC-CEEEEE--------CTTSSEEEEEET--TEEEEEESSS
T ss_pred eeEEEEeCCCCceeeeccCCcc-eEeeEE--------CCCCCEEEEEcC--CeEEEEeCCC
Confidence 4577899999887766443221 112222 457887777652 356666 443
No 202
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=50.98 E-value=1.6e+02 Score=28.82 Aligned_cols=26 Identities=19% Similarity=0.451 Sum_probs=19.7
Q ss_pred EEecCC-cEEEEeCc--eEEEEeCCCCeE
Q 042680 199 YLLPDG-NVYVFANN--RSVVHDPKANKI 224 (530)
Q Consensus 199 ~llp~G-~lfv~Gg~--~~e~yDp~tn~w 224 (530)
...|+| ++++.|+. ...+||..+++.
T Consensus 233 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 233 EFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 345788 88888874 678999988763
No 203
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=50.10 E-value=79 Score=31.66 Aligned_cols=22 Identities=9% Similarity=0.200 Sum_probs=16.9
Q ss_pred ec-CCcEEEEeC--ceEEEEeCCCC
Q 042680 201 LP-DGNVYVFAN--NRSVVHDPKAN 222 (530)
Q Consensus 201 lp-~G~lfv~Gg--~~~e~yDp~tn 222 (530)
.+ ++++|+.|+ ....+||..++
T Consensus 240 ~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 240 HLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp CSSCTTEEEEEETTSEEEEEETTCS
T ss_pred eCCCCCEEEEEeCCCeEEEEECCCC
Confidence 35 788888875 46889999876
No 204
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=49.48 E-value=1.7e+02 Score=28.23 Aligned_cols=27 Identities=15% Similarity=0.233 Sum_probs=18.2
Q ss_pred EEecCCc-EEEE--eCceEEEEeCC-CCeEE
Q 042680 199 YLLPDGN-VYVF--ANNRSVVHDPK-ANKII 225 (530)
Q Consensus 199 ~llp~G~-lfv~--Gg~~~e~yDp~-tn~w~ 225 (530)
...|||+ ||+. |.....+||.. +++..
T Consensus 151 ~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 151 VFDPTETYLYSADLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCEE
T ss_pred EECCCCCEEEEEcCCCCEEEEEEECCCCCEE
Confidence 4568997 5554 24578899988 67653
No 205
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=48.55 E-value=1.8e+02 Score=27.48 Aligned_cols=36 Identities=11% Similarity=0.115 Sum_probs=23.4
Q ss_pred ceEE-EecCCcEEEEe--Cc--eEEEEeCCCCeEEEEccCCC
Q 042680 196 PFVY-LLPDGNVYVFA--NN--RSVVHDPKANKIIREFPQLP 232 (530)
Q Consensus 196 p~~~-llp~G~lfv~G--g~--~~e~yDp~tn~w~~~~p~mp 232 (530)
|+.. +.++|+||+.. .. ....||+.+++.. .+..++
T Consensus 74 p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~-~~~~~~ 114 (306)
T 2p4o_A 74 VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE-TLLTLP 114 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE-EEEECT
T ss_pred ceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE-EEEeCC
Confidence 5443 44699999875 22 3678899888876 443334
No 206
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=46.99 E-value=1.6e+02 Score=26.35 Aligned_cols=69 Identities=14% Similarity=0.063 Sum_probs=36.1
Q ss_pred eeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCC-CCCcccccceecCCCeEEEcCCCC
Q 042680 317 VLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTD-IPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 317 vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~-~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
..-|||+.+++++...+.... .........+||..+. +...+.... ...... ....-|||+.++.+++.
T Consensus 223 ~~s~dg~~l~~~~~~~~~~~~--~~~~~~~l~~~d~~~~---~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 223 HPSPSGDKVVFVSYDADVFDH--PRDLDVRVQLMDMDGG---NVETLFDLFGGQGTMN-SPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp EECTTSSEEEEEEEETTCCSC--CSSEEEEEEEEETTSC---SCEEEEEEEESTTTSC-SCCBCTTSSEEEEEEEC
T ss_pred EECCCCCEEEEEEcCCCCCcc--cccCceEEEEEecCCC---CceeeeccCCCCcccc-cceECCCCCEEEEEEec
Confidence 345899988877654211000 0001135778999877 554443221 111112 23456899987777654
No 207
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=46.60 E-value=2.9e+02 Score=29.26 Aligned_cols=18 Identities=17% Similarity=-0.042 Sum_probs=13.2
Q ss_pred eeEEEEeCCCCcEEEccc
Q 042680 99 CHSIFYDYNKNAVKALKV 116 (530)
Q Consensus 99 a~~~~yDp~t~~w~~l~~ 116 (530)
....+||..+++.+.+..
T Consensus 101 ~~i~~~d~~~~~~~~l~~ 118 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFD 118 (706)
T ss_dssp TEEEEEETTTTEEEEEEC
T ss_pred CEEEEEECCCCceEEccC
Confidence 557789998887776643
No 208
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=45.77 E-value=2.9e+02 Score=28.97 Aligned_cols=171 Identities=12% Similarity=0.087 Sum_probs=86.4
Q ss_pred EEEecCCcEEEEeC---ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcc
Q 042680 198 VYLLPDGNVYVFAN---NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGL 274 (530)
Q Consensus 198 ~~llp~G~lfv~Gg---~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~ 274 (530)
...-|||+.|++++ +.+.++|.++++....++. +....|..+.....| ..+.+|+.+...
T Consensus 329 ~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~---g~~ph~g~g~~~~~p----------~~g~~~~s~~~~---- 391 (543)
T 1nir_A 329 GGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV---GKTPHPGRGANFVHP----------KYGPVWSTSHLG---- 391 (543)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC---SSSBCCTTCEEEEET----------TTEEEEEEEBSS----
T ss_pred ceECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc---CCCCCCCCCcccCCC----------CCccEEEeccCC----
Confidence 34568998554433 5788999999987754432 111112123332222 147888886422
Q ss_pred ccccccccccccCCcEEEEEcCC---CCCcceec-CCCC--ccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccE
Q 042680 275 YLGEEEKRFVNALDDCARMVVTS---PNPEWKIE-KMPA--PRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPM 348 (530)
Q Consensus 275 ~~~~~~~~~~~a~~s~~~~dp~~---~~~~W~~~-~M~~--~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~e 348 (530)
..++..||... +...|+.. .++. .... ....-|||+-+.++..... ..+...++.
T Consensus 392 ------------d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~-~v~~~pdg~~l~v~~~~~~------~~~~~~~v~ 452 (543)
T 1nir_A 392 ------------DGSISLIGTDPKNHPQYAWKKVAELQGQGGGSL-FIKTHPKSSHLYVDTTFNP------DARISQSVA 452 (543)
T ss_dssp ------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC-CEECCTTCCEEEECCTTCS------SHHHHTCEE
T ss_pred ------------CceEEEEEeCCCCCchhcCeEEEEEEcCCCCce-EEEcCCCCCcEEEecCCCC------CcccCceEE
Confidence 12456677643 11238764 3332 2222 2234599988887753100 000023688
Q ss_pred EecCCCCCCCceEEec-------CCCCCCcccccceecCCCeEEEcCCCCCCCCccccCCCCcceEEEEcCCCC
Q 042680 349 LYRPNAPEGQRFAELA-------PTDIPRMYHSVANLLPDGKVFVGGSNDNDGYFEFAKFPTELRLEKFTPPYL 415 (530)
Q Consensus 349 iYDP~t~~g~~Wt~la-------~~~~~R~yHS~a~LLpdGrVlv~GG~~~~~~~~~~~~~t~~~vE~y~Ppyl 415 (530)
+||..+.... .+.+. +-...|..|- .+-+||+-+.+...... . .+..|-+|+...+
T Consensus 453 v~d~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~--~~~~~g~~~~~s~~~~~------~--~~~~i~v~D~~t~ 515 (543)
T 1nir_A 453 VFDLKNLDAK-YQVLPIAEWADLGEGAKRVVQP--EYNKRGDEVWFSVWNGK------N--DSSALVVVDDKTL 515 (543)
T ss_dssp EEETTCTTSC-CEEECHHHHHCCCSSCCEEEEE--EECSSSSEEEEEEECCT------T--SCCEEEEEETTTT
T ss_pred EEECCCCCCC-eEEeechhhcccCCCCCceEec--cCCCCCCEEEEEeecCC------C--CCCeEEEEECCCc
Confidence 9999877321 12220 1112344442 34578886554311000 0 0346778888876
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=45.57 E-value=79 Score=29.42 Aligned_cols=58 Identities=5% Similarity=0.058 Sum_probs=33.7
Q ss_pred eeeeecC-CeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEe-cCCC--CCCcccccceecCCCeEEEcCCC
Q 042680 315 DGVLLPN-GEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAEL-APTD--IPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 315 ~~vvLpd-G~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~l-a~~~--~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
+.+.-+| |++||..... .+.+||++ . ++..+ .... .+...-......+||++|++...
T Consensus 75 ~i~~~~~~g~l~v~~~~~--------------~l~~~d~~-g---~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 136 (314)
T 1pjx_A 75 GCQCDRDANQLFVADMRL--------------GLLVVQTD-G---TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPA 136 (314)
T ss_dssp EEEECSSSSEEEEEETTT--------------EEEEEETT-S---CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECB
T ss_pred eEEEecCCCcEEEEECCC--------------CEEEEeCC-C---CEEEEEeccCCCccccCCcCEEECCCCCEEEEecC
Confidence 3444578 9999976421 36789998 6 66554 3221 11111112344689999998754
No 210
>2vov_A MOPE, surface-associated protein; metal-binding protein, oxidized tryptophan, methanotroph bacterium, kunurenine, copper binding; HET: KYN; 1.35A {Methylococcus capsulatus} PDB: 2vox_A* 2vow_A
Probab=45.21 E-value=26 Score=32.48 Aligned_cols=34 Identities=32% Similarity=0.796 Sum_probs=26.2
Q ss_pred CCceEEEEEcCCCCCcCCCcceEEEEEc-----------CC----------cCcccEEEEe
Q 042680 490 PGVDEVVVAAPPTSALAPPGYYLLSVVN-----------QG----------IPSHSIWFHL 529 (530)
Q Consensus 490 ~g~~~~~v~~P~~~~v~ppG~ymlfv~~-----------~g----------vPS~~~~v~i 529 (530)
.|..+-.+++|. -|||||+|-+ +| ||..|-||.|
T Consensus 277 agaftksitlpk------tgyymlyvanvlevddwsvdadgkltttgevwevpakgcwvni 331 (336)
T 2vov_A 277 AGAFTKSITLPK------TGYYMLYVANVLEVDDWSVDADGKLTTTGEVWEVPAKGCWVNI 331 (336)
T ss_dssp TTEEEEEEECSS------SEEEEEEEEECCEESEEEECTTCCEEEESCCCCSSSSEEEEEE
T ss_pred cceeeeeeeccC------cceEEEEEeeeEEeccceeccCCceeecceEEeccCCceEEEE
Confidence 455677788885 6999999864 22 8999999987
No 211
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=44.98 E-value=1e+02 Score=30.81 Aligned_cols=24 Identities=21% Similarity=0.166 Sum_probs=17.5
Q ss_pred EEecCCc-EEEEeCc--eEEEEeCCCC
Q 042680 199 YLLPDGN-VYVFANN--RSVVHDPKAN 222 (530)
Q Consensus 199 ~llp~G~-lfv~Gg~--~~e~yDp~tn 222 (530)
...++|+ +++.|+. ...+||..++
T Consensus 188 ~~~~~~~~~l~s~~~dg~i~vwd~~~~ 214 (430)
T 2xyi_A 188 SWNPNLNGYLLSASDDHTICLWDINAT 214 (430)
T ss_dssp EECTTSTTEEEEECTTSCEEEEETTSC
T ss_pred EeCCCCCCeEEEEeCCCeEEEEeCCCC
Confidence 3456777 8888873 6789999873
No 212
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=43.43 E-value=1.4e+02 Score=28.94 Aligned_cols=30 Identities=17% Similarity=0.253 Sum_probs=23.0
Q ss_pred EEecCCcEEEEeCc--e-EEEEeCCCCeEEEEc
Q 042680 199 YLLPDGNVYVFANN--R-SVVHDPKANKIIREF 228 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~-~e~yDp~tn~w~~~~ 228 (530)
...|||++++.|+. . +.+||..+++....+
T Consensus 202 ~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 202 RLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp EECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 34579999999874 4 889999998766444
No 213
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=42.65 E-value=2.3e+02 Score=27.28 Aligned_cols=29 Identities=14% Similarity=0.192 Sum_probs=19.0
Q ss_pred eEEEecCCc-EEEEeCceEEEEeCC-CCeEE
Q 042680 197 FVYLLPDGN-VYVFANNRSVVHDPK-ANKII 225 (530)
Q Consensus 197 ~~~llp~G~-lfv~Gg~~~e~yDp~-tn~w~ 225 (530)
++...+||+ ||+.......+||.. +++..
T Consensus 44 ~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~ 74 (365)
T 1jof_A 44 WMTFDHERKNIYGAAMKKWSSFAVKSPTEIV 74 (365)
T ss_dssp EEEECTTSSEEEEEEBTEEEEEEEEETTEEE
T ss_pred EEEECCCCCEEEEEccceEEEEEECCCCCEE
Confidence 345568998 555443477888876 66654
No 214
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=42.55 E-value=60 Score=30.65 Aligned_cols=58 Identities=14% Similarity=0.181 Sum_probs=35.8
Q ss_pred eeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCccccccee--cCCCeEEEcCCCC
Q 042680 315 DGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANL--LPDGKVFVGGSND 391 (530)
Q Consensus 315 ~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~L--LpdGrVlv~GG~~ 391 (530)
+....|||+.+++++.+ | .+.+||..+. +...+.. ....-.+ ... -+||+.+++|+..
T Consensus 91 ~~~~~~~~~~l~s~~~d-g------------~v~iwd~~~~---~~~~~~~--~~~~v~~-~~~~~~~~~~~l~~~~~d 150 (368)
T 3mmy_A 91 DVCWSDDGSKVFTASCD-K------------TAKMWDLSSN---QAIQIAQ--HDAPVKT-IHWIKAPNYSCVMTGSWD 150 (368)
T ss_dssp EEEECTTSSEEEEEETT-S------------EEEEEETTTT---EEEEEEE--CSSCEEE-EEEEECSSCEEEEEEETT
T ss_pred EEEECcCCCEEEEEcCC-C------------cEEEEEcCCC---Cceeecc--ccCceEE-EEEEeCCCCCEEEEccCC
Confidence 33456899999988764 1 5789999887 5443221 1111111 222 5899988888754
No 215
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=41.91 E-value=64 Score=31.94 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=51.7
Q ss_pred CcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCccc
Q 042680 260 DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHC 339 (530)
Q Consensus 260 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~ 339 (530)
+++++++|+.+ ..+..+|+......++...-+....-.+...-|+|+.+++|+.+ |
T Consensus 181 ~~~~l~~~~~d-----------------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-g------ 236 (437)
T 3gre_A 181 EKSLLVALTNL-----------------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-G------ 236 (437)
T ss_dssp SCEEEEEEETT-----------------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-S------
T ss_pred CCCEEEEEeCC-----------------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-C------
Confidence 57888888754 23566777542211222111122222333445899999999865 1
Q ss_pred CCCCCcccEEecCCCCCCCceEE-ecCCCCCCcccccc---eecCCCeEEEcCCCC
Q 042680 340 ADKPSLKPMLYRPNAPEGQRFAE-LAPTDIPRMYHSVA---NLLPDGKVFVGGSND 391 (530)
Q Consensus 340 ~~~p~~~~eiYDP~t~~g~~Wt~-la~~~~~R~yHS~a---~LLpdGrVlv~GG~~ 391 (530)
++.+||..+. +... +......+. .+.+ ..-+||+.+++|+..
T Consensus 237 ------~i~iwd~~~~---~~~~~~~~~~~~~v-~~~~~~~~~s~~~~~l~s~~~d 282 (437)
T 3gre_A 237 ------IIDIWDIRFN---VLIRSWSFGDHAPI-THVEVCQFYGKNSVIVVGGSSK 282 (437)
T ss_dssp ------CEEEEETTTT---EEEEEEBCTTCEEE-EEEEECTTTCTTEEEEEEESTT
T ss_pred ------eEEEEEcCCc---cEEEEEecCCCCce-EEEEeccccCCCccEEEEEcCC
Confidence 5789999876 4322 211000000 1111 122689999998864
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=40.88 E-value=2.5e+02 Score=26.83 Aligned_cols=29 Identities=7% Similarity=0.169 Sum_probs=23.3
Q ss_pred EecCCcEEEEeCceEEEEeCCCCeEEEEcc
Q 042680 200 LLPDGNVYVFANNRSVVHDPKANKIIREFP 229 (530)
Q Consensus 200 llp~G~lfv~Gg~~~e~yDp~tn~w~~~~p 229 (530)
..++|++++.......+||+.+++.. .+.
T Consensus 97 ~~~dg~l~v~~~~gl~~~d~~~g~~~-~~~ 125 (326)
T 2ghs_A 97 KISDSKQLIASDDGLFLRDTATGVLT-LHA 125 (326)
T ss_dssp EEETTEEEEEETTEEEEEETTTCCEE-EEE
T ss_pred EeCCCeEEEEECCCEEEEECCCCcEE-EEe
Confidence 45799999988778899999998876 443
No 217
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=40.06 E-value=1.1e+02 Score=33.41 Aligned_cols=98 Identities=17% Similarity=0.189 Sum_probs=52.6
Q ss_pred CcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCc-----c--ccceeeeecCCeEEEEcCCC
Q 042680 260 DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAP-----R--TMADGVLLPNGEVLIINGAD 331 (530)
Q Consensus 260 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~-----R--~~~~~vvLpdG~VlViGG~~ 331 (530)
+++||++.... .+..+|..+....|+.. ..... + .....+++-+|+||+... .
T Consensus 70 ~g~vyv~~~~~------------------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-d 130 (689)
T 1yiq_A 70 DGVMYTTGPFS------------------VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-D 130 (689)
T ss_dssp TTEEEEECGGG------------------CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-T
T ss_pred CCEEEEEcCCC------------------eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-C
Confidence 78888875421 25668877656678875 33211 0 001223445888887542 1
Q ss_pred CCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCC-cccccceecCCCeEEEcCCC
Q 042680 332 LGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPR-MYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 332 ~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R-~yHS~a~LLpdGrVlv~GG~ 390 (530)
| ....+|.++.. ..|+.-......+ ..+..+-++.+|+||+..+.
T Consensus 131 -g------------~l~AlDa~TG~-~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~ 176 (689)
T 1yiq_A 131 -G------------RLEAIDAKTGQ-RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGG 176 (689)
T ss_dssp -S------------EEEEEETTTCC-EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBC
T ss_pred -C------------EEEEEECCCCC-EeeeecCcCCCCCCccccCCcEEECCEEEEEeCC
Confidence 1 46788887661 2587543211111 12222333459999996543
No 218
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=39.30 E-value=1e+02 Score=32.24 Aligned_cols=140 Identities=15% Similarity=0.152 Sum_probs=73.5
Q ss_pred EEecCCc--EEEEeC-ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCccc
Q 042680 199 YLLPDGN--VYVFAN-NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLY 275 (530)
Q Consensus 199 ~llp~G~--lfv~Gg-~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 275 (530)
...+||+ +|+.+. ....+||..+++.. .+..-+ . ...+. . .+|+.+++++.+.+.
T Consensus 116 ~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~-~l~~~~---~-----~~~~~---s--------pDG~~la~~~~~~~~-- 173 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATEDRVALYALDGGGLR-ELARLP---G-----FGFVS---D--------IRGDLIAGLGFFGGG-- 173 (582)
T ss_dssp EEEECSSCEEEEEECSSCEEEEEEETTEEE-EEEEES---S-----CEEEE---E--------EETTEEEEEEEEETT--
T ss_pred eeCCCCCeEEEEecCCCCceEEEccCCcEE-EeecCC---C-----ceEEE---C--------CCCCEEEEEEEcCCC--
Confidence 4567774 555444 34669999998765 343211 1 11111 1 268877776654211
Q ss_pred cccccccccccCCcEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCC
Q 042680 276 LGEEEKRFVNALDDCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAP 355 (530)
Q Consensus 276 ~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~ 355 (530)
...+.++|+.. .+++...-... ...+...-|||+.++.+... | ..+..+||.++.
T Consensus 174 -----------~~~i~~~d~~~--g~~~~l~~~~~-~~~~~~~SpDG~~l~~~~~~-~----------~~~i~~~d~~~~ 228 (582)
T 3o4h_A 174 -----------RVSLFTSNLSS--GGLRVFDSGEG-SFSSASISPGMKVTAGLETA-R----------EARLVTVDPRDG 228 (582)
T ss_dssp -----------EEEEEEEETTT--CCCEEECCSSC-EEEEEEECTTSCEEEEEECS-S----------CEEEEEECTTTC
T ss_pred -----------CeEEEEEcCCC--CCceEeecCCC-ccccceECCCCCEEEEccCC-C----------eeEEEEEcCCCC
Confidence 12366777653 44543311111 12334556999988843321 1 236789999887
Q ss_pred CCCceEEecCCCCCCcccccc-------eecCCCeEEEcCCC
Q 042680 356 EGQRFAELAPTDIPRMYHSVA-------NLLPDGKVFVGGSN 390 (530)
Q Consensus 356 ~g~~Wt~la~~~~~R~yHS~a-------~LLpdGrVlv~GG~ 390 (530)
+...+... ...-.+.+ ..-|||++++.++.
T Consensus 229 ---~~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 229 ---SVEDLELP--SKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp ---CEEECCCS--CSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred ---cEEEccCC--CcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 66522211 11111222 15699999888764
No 219
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=38.62 E-value=3.9e+02 Score=29.37 Aligned_cols=39 Identities=15% Similarity=0.059 Sum_probs=26.5
Q ss_pred ecCCCCCCCceEEecCCCCC--CcccccceecCCCeEEEcC
Q 042680 350 YRPNAPEGQRFAELAPTDIP--RMYHSVANLLPDGKVFVGG 388 (530)
Q Consensus 350 YDP~t~~g~~Wt~la~~~~~--R~yHS~a~LLpdGrVlv~G 388 (530)
++-..+.|++|+.......+ ..+.+..+.++||+|+++=
T Consensus 617 ~~~S~D~G~TW~~~~~i~~~~~~~~Ys~l~~~~DG~i~ily 657 (686)
T 2jkb_A 617 LVNKEDDSIDWKYHYDIDLPSYGYAYSAITELPNHHIGVLF 657 (686)
T ss_dssp EECTTTCCEEEEEEEESSCTTSBCCSEEEEECTTSCEEEEE
T ss_pred EEeccCCCCcccCCeeecCCCCCccccEEEEeCcCEEEEEE
Confidence 46566778899976555443 2445666677999988764
No 220
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=37.26 E-value=45 Score=33.90 Aligned_cols=73 Identities=18% Similarity=0.184 Sum_probs=41.0
Q ss_pred cceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCCC
Q 042680 313 MADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 313 ~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~ 392 (530)
.|.+++.-||+||..|-...|.-|.+...+....|..-..-.+ +...++. -.+|+.++ ..||+||.-|.|.+
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~---~v~~ia~----G~~hs~al-t~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE---KIVSVGC----GEVCSYAV-TIDGKLYSWGSGVN 375 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS---CEEEEEE----ETTEEEEE-ETTSCEEEEECCTT
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC---CEEEEEc----CCCeEEEE-cCCCCEEEECCCCC
Confidence 5677777899999999765554443221111112222111111 3333321 24677554 68999999999876
Q ss_pred C
Q 042680 393 D 393 (530)
Q Consensus 393 ~ 393 (530)
+
T Consensus 376 G 376 (423)
T 3mvd_K 376 N 376 (423)
T ss_dssp S
T ss_pred C
Confidence 5
No 221
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=37.16 E-value=1.1e+02 Score=33.40 Aligned_cols=99 Identities=12% Similarity=0.159 Sum_probs=52.7
Q ss_pred CCcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCcc-------ccceeeeecCCeEEEEcCC
Q 042680 259 VDAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPR-------TMADGVLLPNGEVLIINGA 330 (530)
Q Consensus 259 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R-------~~~~~vvLpdG~VlViGG~ 330 (530)
.+++||++... ..+..+|..+....|+.. ..+... .....+.+-+|+||+....
T Consensus 65 ~~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d 126 (668)
T 1kv9_A 65 HDGVIYTSMSW------------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD 126 (668)
T ss_dssp ETTEEEEEEGG------------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT
T ss_pred ECCEEEEECCC------------------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC
Confidence 37888887542 125667876656678875 322110 0011233458888875421
Q ss_pred CCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 331 DLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 331 ~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
. .+..+|.++.. ..|+.-..-.........+-++.+|+|||..++
T Consensus 127 g--------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~ 171 (668)
T 1kv9_A 127 G--------------RLIALDAKTGK-AIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGG 171 (668)
T ss_dssp S--------------EEEEEETTTCC-EEEEEECSCTTSSCBCCSCCEEETTEEEECCBC
T ss_pred C--------------EEEEEECCCCC-EeeeeccCCCCCcceecCCCEEECCEEEEeCCC
Confidence 1 46788987761 258753321111122223333459999987543
No 222
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=35.55 E-value=3.7e+02 Score=28.82 Aligned_cols=152 Identities=18% Similarity=0.198 Sum_probs=0.0
Q ss_pred EecCCcEEEEeC--ceEEEEeC-CCCeEEEEccCCCCC-----CCccCCCceEeeccCCCCCCCCCC--CCcE----EEE
Q 042680 200 LLPDGNVYVFAN--NRSVVHDP-KANKIIREFPQLPGG-----ARSYPATGTSVLLPLYLPRDTYKP--VDAE----VLI 265 (530)
Q Consensus 200 llp~G~lfv~Gg--~~~e~yDp-~tn~w~~~~p~mp~~-----~r~yp~~g~svmlpl~~~~~~~~~--~~gk----I~v 265 (530)
++.+|+||+... ..+..+|. ++++.......-... ..........+ + .+++ ||+
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~a------------v~p~~g~~~~rV~v 126 (599)
T 1w6s_A 59 LVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLA------------YWPGDGKTPALILK 126 (599)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCE------------EECCCSSSCCEEEE
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceE------------EEecCCcceeEEEE
Q ss_pred ecCccCCccccccccccccccCCcEEEEEcCCCCCcceec--CCCCccccceeeeecCCeEEE-EcCCCCCCCCcccCCC
Q 042680 266 CGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE--KMPAPRTMADGVLLPNGEVLI-INGADLGSGGWHCADK 342 (530)
Q Consensus 266 ~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~--~M~~~R~~~~~vvLpdG~VlV-iGG~~~g~~g~~~~~~ 342 (530)
..... .+..+|..+....|+.. .-........+-++.+|+||| .+|...+..|
T Consensus 127 ~t~dg------------------~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g------ 182 (599)
T 1w6s_A 127 TQLDG------------------NVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRG------ 182 (599)
T ss_dssp ECTTS------------------EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCC------
T ss_pred EcCCC------------------EEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCC------
Q ss_pred CCcccEEecCCCCCCCceEEecCCCCCC-----------------------------------cccccceecCCCeEEEc
Q 042680 343 PSLKPMLYRPNAPEGQRFAELAPTDIPR-----------------------------------MYHSVANLLPDGKVFVG 387 (530)
Q Consensus 343 p~~~~eiYDP~t~~g~~Wt~la~~~~~R-----------------------------------~yHS~a~LLpdGrVlv~ 387 (530)
.+..||+++. ...|+.-...+... ...+.+.-..+|+||+.
T Consensus 183 ---~v~A~D~~TG-~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g 258 (599)
T 1w6s_A 183 ---YLTAYDVKTG-EQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFG 258 (599)
T ss_dssp ---EEEEEETTTC-CEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEE
T ss_pred ---eEEEEECCCC-cEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEe
Q ss_pred CCCC
Q 042680 388 GSND 391 (530)
Q Consensus 388 GG~~ 391 (530)
-|++
T Consensus 259 ~g~~ 262 (599)
T 1w6s_A 259 TGNP 262 (599)
T ss_dssp CCCC
T ss_pred CCCC
No 223
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=35.27 E-value=5.4e+02 Score=29.09 Aligned_cols=68 Identities=10% Similarity=0.038 Sum_probs=36.4
Q ss_pred cceeeeecCCeEEEEcCCCCCCCC-cccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCC
Q 042680 313 MADGVLLPNGEVLIINGADLGSGG-WHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 313 ~~~~vvLpdG~VlViGG~~~g~~g-~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~ 390 (530)
......-|||++|++.+.. |... +......-....+||..+. +.+.+. ..-.+ ..+-|||+.++.++.
T Consensus 559 ~~~~~~s~dg~~~~~~~~~-g~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~-----~~v~~-~~~S~DG~~l~~~~~ 627 (1045)
T 1k32_A 559 YRMIIPLESSILIYSVPVH-GEFAAYYQGAPEKGVLLKYDVKTR---KVTEVK-----NNLTD-LRLSADRKTVMVRKD 627 (1045)
T ss_dssp EEEEEECSSEEEEEECCCC-CSHHHHHHCCCCCEEEEEEETTTC---CEEEEE-----EEEEE-EEECTTSCEEEEEET
T ss_pred hhheEEcCCCeEEEEeccc-CcccccccccCCCceEEEEECCCC---cEEEee-----cCcce-EEECCCCCEEEEEcC
Confidence 4455667899988873321 1000 0000111236789999988 666554 11122 235689987666653
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=34.55 E-value=2.8e+02 Score=30.07 Aligned_cols=24 Identities=25% Similarity=0.314 Sum_probs=19.1
Q ss_pred ecCCcEEEEeC-ceEEEEeCCCCeE
Q 042680 201 LPDGNVYVFAN-NRSVVHDPKANKI 224 (530)
Q Consensus 201 lp~G~lfv~Gg-~~~e~yDp~tn~w 224 (530)
+.+|+||+... ..+..+|.++++.
T Consensus 75 v~~g~vyv~~~~~~v~AlD~~tG~~ 99 (677)
T 1kb0_A 75 VVDGIMYVSASWSVVHAIDTRTGNR 99 (677)
T ss_dssp EETTEEEEECGGGCEEEEETTTTEE
T ss_pred EECCEEEEECCCCeEEEEECCCCcE
Confidence 35999999876 5688999999863
No 225
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=34.53 E-value=4.4e+02 Score=27.92 Aligned_cols=28 Identities=7% Similarity=-0.040 Sum_probs=20.6
Q ss_pred cCCcEEEEeC---ceEEEEeCCCCeEEEEcc
Q 042680 202 PDGNVYVFAN---NRSVVHDPKANKIIREFP 229 (530)
Q Consensus 202 p~G~lfv~Gg---~~~e~yDp~tn~w~~~~p 229 (530)
|||+..++++ ....++|..+.+..+.++
T Consensus 253 pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 253 WEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp CTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 5898666655 567899999988775554
No 226
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=34.46 E-value=2.3e+02 Score=30.17 Aligned_cols=29 Identities=17% Similarity=0.123 Sum_probs=21.5
Q ss_pred EEEecCCcEEEEeCc--------eEEEEeCCCCeEEE
Q 042680 198 VYLLPDGNVYVFANN--------RSVVHDPKANKIIR 226 (530)
Q Consensus 198 ~~llp~G~lfv~Gg~--------~~e~yDp~tn~w~~ 226 (530)
....|||+.+++++. ...+||..+++..+
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~ 78 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL 78 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE
Confidence 345689997777543 68899999988763
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=34.26 E-value=1.3e+02 Score=32.87 Aligned_cols=98 Identities=13% Similarity=0.166 Sum_probs=52.8
Q ss_pred CcEEEEecCccCCccccccccccccccCCcEEEEEcCCCCCcceec-CCCCcc-------ccceeeeecCCeEEEEcCCC
Q 042680 260 DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPAPR-------TMADGVLLPNGEVLIINGAD 331 (530)
Q Consensus 260 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~~R-------~~~~~vvLpdG~VlViGG~~ 331 (530)
+++||++... ..+..+|+.+....|+.. ...... .....+.+-+++||+.....
T Consensus 77 ~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg 138 (677)
T 1kb0_A 77 DGIMYVSASW------------------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDG 138 (677)
T ss_dssp TTEEEEECGG------------------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTS
T ss_pred CCEEEEECCC------------------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCC
Confidence 7889888542 135668876555678875 322110 11123444588888854311
Q ss_pred CCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcc-cccceecCCCeEEEcCCC
Q 042680 332 LGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMY-HSVANLLPDGKVFVGGSN 390 (530)
Q Consensus 332 ~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~y-HS~a~LLpdGrVlv~GG~ 390 (530)
....+|.++.. ..|+.-......+.+ ...+.++.+|+||+..+.
T Consensus 139 --------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~ 183 (677)
T 1kb0_A 139 --------------RLIALDAATGK-EVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGG 183 (677)
T ss_dssp --------------EEEEEETTTCC-EEEEEETTTTCCSSCBCCSCCEEETTEEEECCBC
T ss_pred --------------EEEEEECCCCC-EEeeecCCcCcCcCcccccCcEEECCEEEEEecc
Confidence 46788887751 258753220111111 222333458999987653
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=32.73 E-value=1.7e+02 Score=27.99 Aligned_cols=78 Identities=14% Similarity=0.208 Sum_probs=42.6
Q ss_pred cEEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCC
Q 042680 289 DCARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDI 368 (530)
Q Consensus 289 s~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~ 368 (530)
.+.+||+.. .+.....++. .-.+....+||++||... . ...+||+++. +++.+.....
T Consensus 72 ~i~~~d~~~--~~~~~~~~~~--~v~~i~~~~dg~l~v~~~-~--------------gl~~~d~~~g---~~~~~~~~~~ 129 (326)
T 2ghs_A 72 ELHELHLAS--GRKTVHALPF--MGSALAKISDSKQLIASD-D--------------GLFLRDTATG---VLTLHAELES 129 (326)
T ss_dssp EEEEEETTT--TEEEEEECSS--CEEEEEEEETTEEEEEET-T--------------EEEEEETTTC---CEEEEECSST
T ss_pred EEEEEECCC--CcEEEEECCC--cceEEEEeCCCeEEEEEC-C--------------CEEEEECCCC---cEEEEeeCCC
Confidence 356777753 3222222221 123334458999988642 1 2568999888 7776544321
Q ss_pred --CCcccccceecCCCeEEEcC
Q 042680 369 --PRMYHSVANLLPDGKVFVGG 388 (530)
Q Consensus 369 --~R~yHS~a~LLpdGrVlv~G 388 (530)
+........+-+||++|++.
T Consensus 130 ~~~~~~~~~i~~d~~G~l~v~~ 151 (326)
T 2ghs_A 130 DLPGNRSNDGRMHPSGALWIGT 151 (326)
T ss_dssp TCTTEEEEEEEECTTSCEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEEe
Confidence 11111224456899999865
No 229
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=32.70 E-value=4.8e+02 Score=27.80 Aligned_cols=22 Identities=23% Similarity=0.347 Sum_probs=14.6
Q ss_pred cCCcEEEEeC-----ceEEEEeCCCCe
Q 042680 202 PDGNVYVFAN-----NRSVVHDPKANK 223 (530)
Q Consensus 202 p~G~lfv~Gg-----~~~e~yDp~tn~ 223 (530)
++|++|+..+ ....++|..+.+
T Consensus 280 ~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 280 WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 6777666654 356778887654
No 230
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=32.31 E-value=4.1e+02 Score=26.89 Aligned_cols=144 Identities=18% Similarity=0.152 Sum_probs=72.8
Q ss_pred cCC-cEEEEe------CceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCcc-CCc
Q 042680 202 PDG-NVYVFA------NNRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSV-REG 273 (530)
Q Consensus 202 p~G-~lfv~G------g~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~-~~~ 273 (530)
|+| +|||.- ...+..+|+.+++....++. + ..| + .++ .| ....+|++.-.. .+.
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v---G--~~P--~-va~---sp-------DG~~lyVan~~~~r~~ 103 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG---G--FLP--N-PVV---AD-------DGSFIAHASTVFSRIA 103 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE---C--SSC--E-EEE---CT-------TSSCEEEEEEEEEETT
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC---C--CCC--c-EEE---CC-------CCCEEEEEcccccccc
Confidence 455 567662 24688999999998766642 2 123 2 222 22 245677774211 000
Q ss_pred cccccccccccccCCcEEEEEcCCCCCcceec-CCCC-cc-----ccceeeeecCCe-EEEEcCCCCCCCCcccCCCCCc
Q 042680 274 LYLGEEEKRFVNALDDCARMVVTSPNPEWKIE-KMPA-PR-----TMADGVLLPNGE-VLIINGADLGSGGWHCADKPSL 345 (530)
Q Consensus 274 ~~~~~~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~~-~R-----~~~~~vvLpdG~-VlViGG~~~g~~g~~~~~~p~~ 345 (530)
.. ...+.+.+||+.. .+-... +.+. .| .-..+.+-|||+ +||.|... ..
T Consensus 104 ~G---------~~~~~VsviD~~t--~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~------------~~ 160 (386)
T 3sjl_D 104 RG---------ERTDYVEVFDPVT--LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP------------AP 160 (386)
T ss_dssp EE---------EEEEEEEEECTTT--CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS------------SC
T ss_pred cC---------CCCCEEEEEECCC--CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC------------CC
Confidence 00 0124577888763 332222 3322 11 233456668996 66665321 11
Q ss_pred ccEEecCCCCCCCceEEecCCCCCC-------cccccceecCCCeEEEcCCCC
Q 042680 346 KPMLYRPNAPEGQRFAELAPTDIPR-------MYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 346 ~~eiYDP~t~~g~~Wt~la~~~~~R-------~yHS~a~LLpdGrVlv~GG~~ 391 (530)
++-+.|.++. +-.. ..+++- .-|....+-+||++++..-..
T Consensus 161 ~VsVID~~t~---~vv~--tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 161 AVGVVDLEGK---AFKR--MLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEEEETTTT---EEEE--EEECCSEEEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred eEEEEECCCC---cEEE--EEECCCcceeecCCCceeEEECCCCCEEEEECCC
Confidence 5678898887 4331 111111 111122445799988887543
No 231
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=31.38 E-value=1.6e+02 Score=31.31 Aligned_cols=97 Identities=9% Similarity=0.185 Sum_probs=51.8
Q ss_pred CcEEEEecCccCCccccccccccccccCCcEEEEEc-CCCCCcceec-CCCCc-c------ccceeeeecCCeEEEEcCC
Q 042680 260 DAEVLICGGSVREGLYLGEEEKRFVNALDDCARMVV-TSPNPEWKIE-KMPAP-R------TMADGVLLPNGEVLIINGA 330 (530)
Q Consensus 260 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~dp-~~~~~~W~~~-~M~~~-R------~~~~~vvLpdG~VlViGG~ 330 (530)
+++||++...+ ..+..+|+ .+....|+.. ..... + .....+++-+|+||+....
T Consensus 62 ~g~vyv~~~~~-----------------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d 124 (571)
T 2ad6_A 62 GDMMYVHSAFP-----------------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN 124 (571)
T ss_dssp TTEEEEECSTT-----------------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT
T ss_pred CCEEEEEeCCC-----------------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC
Confidence 78898875421 13567888 6656679875 32211 1 0111234458899886432
Q ss_pred CCCCCCcccCCCCCcccEEecCCCCCCCceEEe-cCCCCCCcccccceecCCCeEEEcCC
Q 042680 331 DLGSGGWHCADKPSLKPMLYRPNAPEGQRFAEL-APTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 331 ~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~l-a~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
. ....+|.++.. ..|+.- ..........+ +-++.+|+||+..+
T Consensus 125 g--------------~l~alD~~tG~-~~W~~~~~~~~~~~~~~~-~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 125 G--------------HLLALDAKTGK-INWEVEVCDPKVGSTLTQ-APFVAKDTVLMGCS 168 (571)
T ss_dssp S--------------EEEEEETTTCC-EEEEEECCCGGGTCBCCS-CCEEETTEEEEECB
T ss_pred C--------------EEEEEECCCCC-EEEEecCCCCCccceecc-CCEEECCEEEEEec
Confidence 1 46778887651 258742 22111111122 22234899998765
No 232
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=31.36 E-value=84 Score=29.45 Aligned_cols=60 Identities=12% Similarity=0.125 Sum_probs=33.9
Q ss_pred ceeeeecCCe-EEEEcCCCCCCCCcccCCCCCcccEEecC-CCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCC
Q 042680 314 ADGVLLPNGE-VLIINGADLGSGGWHCADKPSLKPMLYRP-NAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSND 391 (530)
Q Consensus 314 ~~~vvLpdG~-VlViGG~~~g~~g~~~~~~p~~~~eiYDP-~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~ 391 (530)
.+....|||+ .+++|+.+ | .+.+||. .+. +...+........-.+ ....| ++.+++|+..
T Consensus 60 ~~~~~~~~~~~~l~~~~~d-g------------~i~~wd~~~~~---~~~~~~~~~~~~~v~~-l~~~~-~~~l~s~~~d 121 (342)
T 1yfq_A 60 LCCNFIDNTDLQIYVGTVQ-G------------EILKVDLIGSP---SFQALTNNEANLGICR-ICKYG-DDKLIAASWD 121 (342)
T ss_dssp EEEEEEESSSEEEEEEETT-S------------CEEEECSSSSS---SEEECBSCCCCSCEEE-EEEET-TTEEEEEETT
T ss_pred EEEEECCCCCcEEEEEcCC-C------------eEEEEEeccCC---ceEeccccCCCCceEE-EEeCC-CCEEEEEcCC
Confidence 3445568999 88888764 1 5789998 777 5544432101111112 23345 6667766643
No 233
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=30.78 E-value=5e+02 Score=27.36 Aligned_cols=27 Identities=26% Similarity=0.185 Sum_probs=21.5
Q ss_pred EEecCCcEEEEeCceEEEEeCCCCeEE
Q 042680 199 YLLPDGNVYVFANNRSVVHDPKANKII 225 (530)
Q Consensus 199 ~llp~G~lfv~Gg~~~e~yDp~tn~w~ 225 (530)
...||++|++..+....+||..+++..
T Consensus 88 ~~spd~~~~~~~~~~i~~~d~~~~~~~ 114 (706)
T 2z3z_A 88 LDAGRGLVVLFTQGGLVGFDMLARKVT 114 (706)
T ss_dssp EETTTTEEEEEETTEEEEEETTTTEEE
T ss_pred EECCCCeEEEEECCEEEEEECCCCceE
Confidence 345787777777788999999998765
No 234
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=29.94 E-value=3.5e+02 Score=29.19 Aligned_cols=23 Identities=26% Similarity=0.485 Sum_probs=18.4
Q ss_pred ecCCcEEEEeC-ceEEEEeCCCCe
Q 042680 201 LPDGNVYVFAN-NRSVVHDPKANK 223 (530)
Q Consensus 201 lp~G~lfv~Gg-~~~e~yDp~tn~ 223 (530)
+.+|+||+... ..+..+|.++++
T Consensus 64 v~~g~vyv~~~~~~v~AlD~~tG~ 87 (668)
T 1kv9_A 64 FHDGVIYTSMSWSRVIAVDAASGK 87 (668)
T ss_dssp EETTEEEEEEGGGEEEEEETTTCC
T ss_pred EECCEEEEECCCCeEEEEECCCCh
Confidence 45999999865 468889999875
No 235
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=27.64 E-value=5.4e+02 Score=26.81 Aligned_cols=61 Identities=13% Similarity=0.122 Sum_probs=35.9
Q ss_pred eeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCc----c--cccceecCCCeEEEcCC
Q 042680 316 GVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRM----Y--HSVANLLPDGKVFVGGS 389 (530)
Q Consensus 316 ~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~----y--HS~a~LLpdGrVlv~GG 389 (530)
..--|||++|+++... | .....++|+++. ++..+.+....-. . .......+||++++.+.
T Consensus 247 ~~~spdg~l~~~~~~~-~----------~~~l~~~~~~~~---~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 247 AEWAPDGSLIVATDRT-G----------WWNLHRVDPATG---AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp EEECTTSCEEEEECTT-S----------SCEEEEECTTTC---CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred eEECCCCeEEEEECCC-C----------CeEEEEEECCCC---ceeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 3445899988776543 1 125678888777 7776654322110 0 01233457999988876
Q ss_pred C
Q 042680 390 N 390 (530)
Q Consensus 390 ~ 390 (530)
.
T Consensus 313 ~ 313 (662)
T 3azo_A 313 K 313 (662)
T ss_dssp S
T ss_pred c
Confidence 4
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=27.04 E-value=6.2e+02 Score=27.31 Aligned_cols=24 Identities=17% Similarity=0.338 Sum_probs=18.6
Q ss_pred ecCCcEEEEeC-ceEEEEeCCCCeE
Q 042680 201 LPDGNVYVFAN-NRSVVHDPKANKI 224 (530)
Q Consensus 201 lp~G~lfv~Gg-~~~e~yDp~tn~w 224 (530)
+.+|+||+... .....+|.+|++.
T Consensus 68 v~~g~vyv~~~~~~v~AlD~~tG~~ 92 (689)
T 1yiq_A 68 VVDGVMYTTGPFSVVYALDARDGRL 92 (689)
T ss_dssp EETTEEEEECGGGCEEEEETTTCCE
T ss_pred EECCEEEEEcCCCeEEEEECCCCce
Confidence 45999999865 4688899998753
No 237
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=26.39 E-value=38 Score=34.27 Aligned_cols=69 Identities=23% Similarity=0.393 Sum_probs=39.3
Q ss_pred cceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCC-----CcccccceecC-------
Q 042680 313 MADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIP-----RMYHSVANLLP------- 380 (530)
Q Consensus 313 ~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~-----R~yHS~a~LLp------- 380 (530)
+...+.|+||+||+.-=..... ..-....+|- .++.|++|+.+...... -.+|-+...+|
T Consensus 25 yp~~v~L~dG~lLa~~~~~~~~-------~~~~~~~v~r-S~DgG~TW~~~~~v~~~~~g~~~~~~P~l~~lp~~v~~~~ 96 (355)
T 3a72_A 25 YPRNEQLPNGDLLATWENYSPE-------PPAVYFPIYR-SKDHGKTWNEISRVHDTVNGYGLRYQPFLYSLPERVGSFK 96 (355)
T ss_dssp EEEEEECTTSCEEEEEEECCCS-------SSCCCEEEEE-ESSTTSCCEEEEEECCTTTSSCEEEEEEEEECSSCBTTBC
T ss_pred cceEEEcCCCCEEEEEEeecCC-------CCCceEEEEE-EcCCCcCcCCCcccCCCcCCcccccCCcEEecCcccccCC
Confidence 4667899999999852111000 0011234554 46778999986543321 12244444556
Q ss_pred CCeEEEcCC
Q 042680 381 DGKVFVGGS 389 (530)
Q Consensus 381 dGrVlv~GG 389 (530)
+|+|+.+|.
T Consensus 97 ~G~ll~~~~ 105 (355)
T 3a72_A 97 KGTLLLAGS 105 (355)
T ss_dssp TTCEEEEEE
T ss_pred CCcEEEEEe
Confidence 999999963
No 238
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=26.21 E-value=5.2e+02 Score=26.11 Aligned_cols=26 Identities=19% Similarity=0.395 Sum_probs=19.9
Q ss_pred EEec-CCcEEEE--eCceEEEEeCCCCeE
Q 042680 199 YLLP-DGNVYVF--ANNRSVVHDPKANKI 224 (530)
Q Consensus 199 ~llp-~G~lfv~--Gg~~~e~yDp~tn~w 224 (530)
.+-+ +|+||+. ++....+||+.+++.
T Consensus 234 avd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 234 AVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred EEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 4556 8999987 345789999997766
No 239
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=25.46 E-value=5.3e+02 Score=25.95 Aligned_cols=27 Identities=15% Similarity=0.206 Sum_probs=21.0
Q ss_pred EEec-CCcEEEE--eCceEEEEeCCCCeEE
Q 042680 199 YLLP-DGNVYVF--ANNRSVVHDPKANKII 225 (530)
Q Consensus 199 ~llp-~G~lfv~--Gg~~~e~yDp~tn~w~ 225 (530)
.+-+ +|+||+. ++....+||+.+....
T Consensus 232 avdp~~g~lyv~d~~~~~V~~~~~~~~~~~ 261 (430)
T 3tc9_A 232 ETHPINGELYFNSWNAGQVFRYDFTTQETT 261 (430)
T ss_dssp EECTTTCCEEEEETTTTEEEEEETTTTEEE
T ss_pred EEeCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 4556 8999997 5578999999988653
No 240
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=25.31 E-value=1.5e+02 Score=29.90 Aligned_cols=68 Identities=29% Similarity=0.382 Sum_probs=39.9
Q ss_pred cceeeeecCCeEEEEcCCCCCCCCcccCCC-CCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCC
Q 042680 313 MADGVLLPNGEVLIINGADLGSGGWHCADK-PSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGS 389 (530)
Q Consensus 313 ~~~~vvLpdG~VlViGG~~~g~~g~~~~~~-p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG 389 (530)
.|.+++.-||+||..|-...|.-|.+...+ ....|..-+- .. ++..++. -.+|+.+ |..||+||.-|.
T Consensus 85 ~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~-~~---~i~~va~----G~~hs~a-l~~~G~v~~wG~ 153 (423)
T 3mvd_K 85 MHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDL-PG---KALCISA----GDSHSAC-LLEDGRVFAWGS 153 (423)
T ss_dssp SEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCC-SS---CEEEEEE----CSSEEEE-EETTSCEEEEEC
T ss_pred CeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcC-CC---CEEEEEc----CcCeEEE-EeCCCeEEEEeC
Confidence 577777789999999976555444322111 1233433321 11 4444332 2367754 568999999997
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=25.25 E-value=52 Score=32.76 Aligned_cols=24 Identities=13% Similarity=0.156 Sum_probs=17.0
Q ss_pred cCCcEEEEeC-ceEEEEeCCCCeEE
Q 042680 202 PDGNVYVFAN-NRSVVHDPKANKII 225 (530)
Q Consensus 202 p~G~lfv~Gg-~~~e~yDp~tn~w~ 225 (530)
.+|+||+.+. .....+|.++++..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~ 32 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIK 32 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEE
Confidence 4677777655 46788999987543
No 242
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=25.04 E-value=4.3e+02 Score=27.03 Aligned_cols=111 Identities=14% Similarity=0.048 Sum_probs=57.5
Q ss_pred cEEEEeC------ceEEEEeCCCCeEEEEccCCCCCCCccCCCceEeeccCCCCCCCCCCCCcEEEEecCccCCcccccc
Q 042680 205 NVYVFAN------NRSVVHDPKANKIIREFPQLPGGARSYPATGTSVLLPLYLPRDTYKPVDAEVLICGGSVREGLYLGE 278 (530)
Q Consensus 205 ~lfv~Gg------~~~e~yDp~tn~w~~~~p~mp~~~r~yp~~g~svmlpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~ 278 (530)
++||.-. +.+.++|+.+++....++. + ..| +.+ + .| ...++||+--.......
T Consensus 86 ~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v---G--~~P--gia-~---Sp-------Dgk~lyVan~~~~~~~~--- 144 (426)
T 3c75_H 86 RVYIQDPAHFAAITQQFVIDGSTGRILGMTDG---G--FLP--HPV-A---AE-------DGSFFAQASTVFERIAR--- 144 (426)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEE---C--SSC--EEE-E---CT-------TSSCEEEEEEEEEETTE---
T ss_pred EEEEECCCcCCCCCeEEEEECCCCEEEEEEEC---C--CCC--ceE-E---CC-------CCCEEEEEecccccccc---
Confidence 4777643 5788999999998866652 1 134 332 2 22 24567776311000000
Q ss_pred ccccccccCCcEEEEEcCCCCCcceec-CCC-Ccc-----ccceeeeecCCe-EEEEcCCCCCCCCcccCCCCCcccEEe
Q 042680 279 EEKRFVNALDDCARMVVTSPNPEWKIE-KMP-APR-----TMADGVLLPNGE-VLIINGADLGSGGWHCADKPSLKPMLY 350 (530)
Q Consensus 279 ~~~~~~~a~~s~~~~dp~~~~~~W~~~-~M~-~~R-----~~~~~vvLpdG~-VlViGG~~~g~~g~~~~~~p~~~~eiY 350 (530)
-...+.+..||+.. .+-... +++ .+| .-+.+.+-|||+ +||.+-.. ..++.++
T Consensus 145 -----G~~~~~VsviD~~t--~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~------------~~~VsVI 205 (426)
T 3c75_H 145 -----GKRTDYVEVFDPVT--FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP------------APAVGVV 205 (426)
T ss_dssp -----EEEEEEEEEECTTT--CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS------------SCEEEEE
T ss_pred -----CCCCCEEEEEECCC--CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC------------CCeEEEE
Confidence 00123567788753 322222 333 112 123556668995 66655211 1257889
Q ss_pred cCCCC
Q 042680 351 RPNAP 355 (530)
Q Consensus 351 DP~t~ 355 (530)
|..+.
T Consensus 206 D~~t~ 210 (426)
T 3c75_H 206 DLEGK 210 (426)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 99888
No 243
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=24.90 E-value=6.8e+02 Score=27.00 Aligned_cols=25 Identities=16% Similarity=0.074 Sum_probs=20.2
Q ss_pred EEecCCcEEEEeCc--eEEEEeCCCCe
Q 042680 199 YLLPDGNVYVFANN--RSVVHDPKANK 223 (530)
Q Consensus 199 ~llp~G~lfv~Gg~--~~e~yDp~tn~ 223 (530)
.-.|||+.++.|+. .+.+||..++.
T Consensus 136 afSPDG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 136 EWNPIESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp EECSSSSCEEEEETTSEEEEEECCCCT
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 34589999999984 67899999874
No 244
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=24.74 E-value=74 Score=31.99 Aligned_cols=73 Identities=22% Similarity=0.273 Sum_probs=40.9
Q ss_pred cceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceEEecCCCCCCcccccceecCCCeEEEcCCCCC
Q 042680 313 MADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFAELAPTDIPRMYHSVANLLPDGKVFVGGSNDN 392 (530)
Q Consensus 313 ~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt~la~~~~~R~yHS~a~LLpdGrVlv~GG~~~ 392 (530)
.|.+++.-||+||..|-...|.-|.+.. .....|..-..-. +.+...++. -.+|+.+ |..||+||.-|.|..
T Consensus 275 ~hs~alt~~G~v~~wG~n~~GqLG~g~~-~~~~~P~~v~~l~--~~~v~~ia~----G~~h~~a-l~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 275 QFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQGLQ--GKKVIAIAT----GSLHCVC-CTEDGEVYTWGDNDE 346 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTCSSSC-CCEEEEEECGGGT--TCCEEEEEE----CSSEEEE-EETTCCEEEEECCTT
T ss_pred CEEEEEeCCCeEEEEeCCCCCCCCCCCC-ccccCCeEeccCC--CCCEEEEEe----ccCeEEE-ECCCCCEEEeeCCCC
Confidence 5677778899999999655444332211 1112222211111 113443322 3467654 568999999999876
Q ss_pred C
Q 042680 393 D 393 (530)
Q Consensus 393 ~ 393 (530)
+
T Consensus 347 G 347 (389)
T 3kci_A 347 G 347 (389)
T ss_dssp S
T ss_pred C
Confidence 4
No 245
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=23.99 E-value=2.2e+02 Score=29.43 Aligned_cols=29 Identities=7% Similarity=-0.063 Sum_probs=21.1
Q ss_pred EEecCCcEEEEeCc------eEEEEeCCCCeEEEEc
Q 042680 199 YLLPDGNVYVFANN------RSVVHDPKANKIIREF 228 (530)
Q Consensus 199 ~llp~G~lfv~Gg~------~~e~yDp~tn~w~~~~ 228 (530)
...|||+..+++.. ...++|..++++. .+
T Consensus 156 ~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l 190 (582)
T 3o4h_A 156 VSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VF 190 (582)
T ss_dssp EEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EE
T ss_pred EECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Ee
Confidence 45689998886543 4678899888876 44
No 246
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=23.95 E-value=3.8e+02 Score=27.12 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=24.9
Q ss_pred ceEEEecCCc-EEEEe-----------CceEEEEeCCCCeEEEEcc
Q 042680 196 PFVYLLPDGN-VYVFA-----------NNRSVVHDPKANKIIREFP 229 (530)
Q Consensus 196 p~~~llp~G~-lfv~G-----------g~~~e~yDp~tn~w~~~~p 229 (530)
|++.+.|||+ ||+.. .+.+.+||+.+++....++
T Consensus 81 P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~ 126 (386)
T 3sjl_D 81 PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIE 126 (386)
T ss_dssp CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE
T ss_pred CcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEE
Confidence 6667788988 66653 1357899999999876664
No 247
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=22.78 E-value=4.1e+02 Score=27.93 Aligned_cols=35 Identities=11% Similarity=0.028 Sum_probs=23.8
Q ss_pred cceE-EEec--CCcEEEEeC--ceEEEEeCCCCeEEEEccC
Q 042680 195 YPFV-YLLP--DGNVYVFAN--NRSVVHDPKANKIIREFPQ 230 (530)
Q Consensus 195 Yp~~-~llp--~G~lfv~Gg--~~~e~yDp~tn~w~~~~p~ 230 (530)
.|.. ..-| +++||++-. ....+.|+++++.. .+..
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~-~l~~ 179 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS-SPLN 179 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE-EEEC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE-EEEc
Confidence 3543 3334 488999854 46788999999987 4433
No 248
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=22.16 E-value=5e+02 Score=27.51 Aligned_cols=27 Identities=33% Similarity=0.489 Sum_probs=21.0
Q ss_pred EecCCcEEEEeC-ceEEEEeCCCCe--EEE
Q 042680 200 LLPDGNVYVFAN-NRSVVHDPKANK--IIR 226 (530)
Q Consensus 200 llp~G~lfv~Gg-~~~e~yDp~tn~--w~~ 226 (530)
++.+|+||+... .....+|.++++ |..
T Consensus 65 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 94 (582)
T 1flg_A 65 IVSDGVIYVTASYSRLFALDAKTGKRLWTY 94 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred EEECCEEEEEcCCCCEEEEECCCCcEEEEE
Confidence 345999999887 568899999875 653
No 249
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=20.94 E-value=40 Score=33.64 Aligned_cols=54 Identities=9% Similarity=0.127 Sum_probs=25.7
Q ss_pred EEEEEcCCCCCcceecCCCCccccceeeeecCCeEEEEcCCCCCCCCcccCCCCCcccEEecCCCCCCCceE
Q 042680 290 CARMVVTSPNPEWKIEKMPAPRTMADGVLLPNGEVLIINGADLGSGGWHCADKPSLKPMLYRPNAPEGQRFA 361 (530)
Q Consensus 290 ~~~~dp~~~~~~W~~~~M~~~R~~~~~vvLpdG~VlViGG~~~g~~g~~~~~~p~~~~eiYDP~t~~g~~Wt 361 (530)
+..+|..+....|+... ...... .+..+|++|+.++.+ | ...++|+++... .|+
T Consensus 21 v~a~d~~tG~~~W~~~~---~~~~s~-p~~~~g~~~v~~s~d-g------------~l~a~d~~tG~~-~w~ 74 (369)
T 2hz6_A 21 LHAVSKRTGSIKWTLKE---DPVLQV-PTHVEEPAFLPDPND-G------------SLYTLGSKNNEG-LTK 74 (369)
T ss_dssp EEEEETTTCCEEEEEEC---CCSCCC-C-----CCEEECTTT-C------------CEEEC-----CC-SEE
T ss_pred EEEEECCCCCEEEEecC---CCceec-ceEcCCCEEEEeCCC-C------------EEEEEECCCCce-eee
Confidence 56788876566788753 122233 234688898886543 1 467888876522 454
Done!