BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042681
(339 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 292 bits (748), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 211/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 12 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLRE 69
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 70 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 128
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP+
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQE 248
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 309 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 356
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 292 bits (748), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 211/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 16 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLRE 73
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 74 IKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 132
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL+ ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 313 PYLAQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 360
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 210/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 22 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLRE 79
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 80 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 138
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 139 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 258
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 259 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 318
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 319 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 366
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 210/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLRE 71
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 130
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 311 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 358
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 210/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 34 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLRE 91
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 92 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 150
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 271 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 331 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 378
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 210/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 16 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLRE 73
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 74 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 132
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 313 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 360
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 291 bits (746), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 210/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLRE 71
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 130
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 311 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 358
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 291 bits (746), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 210/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 12 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLRE 69
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 70 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 128
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 248
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 309 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 356
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 291 bits (746), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 210/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 19 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLRE 76
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 77 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 135
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 316 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 363
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 291 bits (746), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 210/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 20 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLRE 77
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 78 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 136
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 137 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 256
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 257 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 316
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 317 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 364
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 291 bits (746), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 210/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 11 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLRE 68
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 69 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 127
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 128 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 247
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 248 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 307
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 308 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 355
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 291 bits (746), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 210/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLRE 75
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 134
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 362
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 290 bits (743), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 210/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAI+KI+ F+++ +R LRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIRKIS-PFEHQTYCQRTLRE 75
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 134
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 362
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 290 bits (743), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 161/348 (46%), Positives = 209/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLRE 75
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL+++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKC-QHLSNDHICYFL 134
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+TEYV T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 362
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 289 bits (740), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/361 (45%), Positives = 214/361 (59%), Gaps = 58/361 (16%)
Query: 19 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA 78
K + YNI + FQ+ S +G GAYG+VCSA + T E VAIKKI FD + A
Sbjct: 3 KRIVYNISSD-FQLKSL-------LGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFA 53
Query: 79 KRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDD 138
R LREIK+L H HENI+ + +I P E FN+VYI+ ELM TDLH++I S Q L+DD
Sbjct: 54 LRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDD 112
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART----------- 187
H QYF+YQ LR +K +H +NV+HRDLKPSNLL+N+NCDLK+CDFGLAR
Sbjct: 113 HIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 188 TSETDFMTEYVVTRW--------------------------------DTLFPGKDYVQQL 215
T + MTEYV TRW +FPG+DY QL
Sbjct: 173 TGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 216 TMITELLGSP-DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVF 274
+I ++G+P D+DL + S AR Y+K LP P P + FP ++P IDL +RMLVF
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVF 292
Query: 275 DPAKRITVEEALNHPYLSSLHEINEEPTC-PYP---FNFDFEQTSMNEEDIKELILRECL 330
DPAKRIT +EAL HPYL + H+ N+EP P P F FD + ++ +D+K+LI E
Sbjct: 293 DPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF 352
Query: 331 N 331
+
Sbjct: 353 S 353
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 288 bits (738), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 209/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLRE 71
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 130
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN DLKICDFGLAR T F+TEYV T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 311 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 358
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 288 bits (736), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 209/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLRE 71
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 130
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN DLKICDFGLAR T F+TEYV T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 311 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 358
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 288 bits (736), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 209/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYXQRTLRE 75
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 134
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN DLKICDFGLAR T F+TEYV T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 362
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 288 bits (736), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 209/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLRE 75
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 134
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN DLKICDFGLAR T F+TEYV T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 362
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 287 bits (735), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 209/348 (60%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 16 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLRE 73
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 74 IKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 132
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN DLKICDFGLAR T F+TEYV T
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 253 DLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL+ ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 313 PYLAQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 360
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 287 bits (734), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 205/332 (61%), Gaps = 38/332 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG GAYG+V SA T ++VAIKKI NAFD +AKR LRE+K+L H H+NI+ +
Sbjct: 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI 118
Query: 100 KDII-PPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
KDI+ P + +F VY+V +LM++DLHQII S Q LT +H +YFLYQLLRGLKY+HSA
Sbjct: 119 KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 178
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLART--TSETD---FMTEYVVTRW----------- 202
V+HRDLKPSNLL+N NC+LKI DFG+AR TS + FMTEYV TRW
Sbjct: 179 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH 238
Query: 203 ---------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRY 241
LFPGK+YV QL +I +LG+P + + + ++ R Y
Sbjct: 239 EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAY 298
Query: 242 VKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEP 301
++ LP P+ +P A+ L RML F+P+ RI+ AL HP+L+ H+ ++EP
Sbjct: 299 IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEP 358
Query: 302 TCPYPFNFDFEQTSMNEEDIKELILRECLNFH 333
C PF+F F++ ++ E IKE I+ E +FH
Sbjct: 359 DCAPPFDFAFDREALTRERIKEAIVAEIEDFH 390
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 286 bits (733), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 205/332 (61%), Gaps = 38/332 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG GAYG+V SA T ++VAIKKI NAFD +AKR LRE+K+L H H+NI+ +
Sbjct: 60 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI 119
Query: 100 KDII-PPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
KDI+ P + +F VY+V +LM++DLHQII S Q LT +H +YFLYQLLRGLKY+HSA
Sbjct: 120 KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 179
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLART--TSETD---FMTEYVVTRW----------- 202
V+HRDLKPSNLL+N NC+LKI DFG+AR TS + FMTEYV TRW
Sbjct: 180 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH 239
Query: 203 ---------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRY 241
LFPGK+YV QL +I +LG+P + + + ++ R Y
Sbjct: 240 EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAY 299
Query: 242 VKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEP 301
++ LP P+ +P A+ L RML F+P+ RI+ AL HP+L+ H+ ++EP
Sbjct: 300 IQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEP 359
Query: 302 TCPYPFNFDFEQTSMNEEDIKELILRECLNFH 333
C PF+F F++ ++ E IKE I+ E +FH
Sbjct: 360 DCAPPFDFAFDREALTRERIKEAIVAEIEDFH 391
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 286 bits (733), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 159/348 (45%), Positives = 208/348 (59%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 18 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLRE 75
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 76 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 134
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+ E V T
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 315 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 362
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 286 bits (733), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 159/348 (45%), Positives = 208/348 (59%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 19 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLRE 76
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 77 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 135
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN CDLKICDFGLAR T F+ E V T
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 316 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 363
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/361 (45%), Positives = 213/361 (59%), Gaps = 58/361 (16%)
Query: 19 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA 78
K + YNI + FQ+ S +G GAYG+VCSA + T E VAIKKI FD + A
Sbjct: 3 KRIVYNISSD-FQLKSL-------LGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFA 53
Query: 79 KRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDD 138
R LREIK+L H HENI+ + +I P E FN+VYI+ ELM TDLH++I S Q L+DD
Sbjct: 54 LRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDD 112
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART----------- 187
H QYF+YQ LR +K +H +NV+HRDLKPSNLL+N+NCDLK+CDFGLAR
Sbjct: 113 HIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 188 TSETDFMTEYVVTRW--------------------------------DTLFPGKDYVQQL 215
T + MTE V TRW +FPG+DY QL
Sbjct: 173 TGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 216 TMITELLGSP-DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVF 274
+I ++G+P D+DL + S AR Y+K LP P P + FP ++P IDL +RMLVF
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVF 292
Query: 275 DPAKRITVEEALNHPYLSSLHEINEEPTC-PYP---FNFDFEQTSMNEEDIKELILRECL 330
DPAKRIT +EAL HPYL + H+ N+EP P P F FD + ++ +D+K+LI E
Sbjct: 293 DPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF 352
Query: 331 N 331
+
Sbjct: 353 S 353
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 286 bits (732), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/361 (45%), Positives = 213/361 (59%), Gaps = 58/361 (16%)
Query: 19 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA 78
K + YNI + FQ+ S +G GAYG+VCSA + T E VAIKKI FD + A
Sbjct: 3 KRIVYNISSD-FQLKSL-------LGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFA 53
Query: 79 KRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDD 138
R LREIK+L H HENI+ + +I P E FN+VYI+ ELM TDLH++I S Q L+DD
Sbjct: 54 LRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDD 112
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART----------- 187
H QYF+YQ LR +K +H +NV+HRDLKPSNLL+N+NCDLK+CDFGLAR
Sbjct: 113 HIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 188 TSETDFMTEYVVTRW--------------------------------DTLFPGKDYVQQL 215
T + M E+V TRW +FPG+DY QL
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 216 TMITELLGSP-DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVF 274
+I ++G+P D+DL + S AR Y+K LP P P + FP ++P IDL +RMLVF
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVF 292
Query: 275 DPAKRITVEEALNHPYLSSLHEINEEPTC-PYP---FNFDFEQTSMNEEDIKELILRECL 330
DPAKRIT +EAL HPYL + H+ N+EP P P F FD + ++ +D+K+LI E
Sbjct: 293 DPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF 352
Query: 331 N 331
+
Sbjct: 353 S 353
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 285 bits (728), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/348 (45%), Positives = 208/348 (59%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 14 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLRE 71
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVYIV +LM+TDL++++++ Q L++DH YFL
Sbjct: 72 IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFL 130
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN DLKI DFGLAR T F+TEYV T
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 311 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 358
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 284 bits (727), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/348 (45%), Positives = 206/348 (59%), Gaps = 39/348 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G +F V +Y L IG GAYG+VCSA ++ K VAIKKI+ F+++ +R LRE
Sbjct: 34 VRGQVFDVGPRYTN-LSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLRE 91
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
IK+L HENI+ + DII E+ DVY+V LM DL++++++ Q L++DH YFL
Sbjct: 92 IKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFL 150
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLLLN DLKICDFGLAR T F+TEYV T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y+ LPH K P+++ FPN A+DL ++ML F+P KRI VE+AL H
Sbjct: 271 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
PYL ++ ++EP PF FD E + +E +KELI E F P +
Sbjct: 331 PYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGY 378
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 281 bits (719), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/346 (45%), Positives = 205/346 (59%), Gaps = 39/346 (11%)
Query: 25 ILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+ G F V +Y LQ IG GAYG+V SA + K VAIKKI+ F+++ +R LRE
Sbjct: 34 VKGQPFDVGPRYTQ-LQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQRTLRE 91
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
I++L HEN++ ++DI+ E DVYIV +LM+TDL+++++S+Q L++DH YFL
Sbjct: 92 IQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFL 150
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT----SETDFMTEYVVT 200
YQ+LRGLKYIHSANVLHRDLKPSNLL+N CDLKICDFGLAR T F+TE V T
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVAT 210
Query: 201 RW--------------------------------DTLFPGKDYVQQLTMITELLGSPDDS 228
RW +FPGK Y+ QL I +LGSP
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
DL + + AR Y++ LP K +++ FP A+DL +RML F+P KRITVEEAL H
Sbjct: 271 DLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAH 330
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
PYL ++ +EP PF F E + +E +KELI +E F P
Sbjct: 331 PYLEQYYDPTDEPVAEEPFTFAMELDDLPKERLKELIFQETARFQP 376
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 271 bits (693), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 201/338 (59%), Gaps = 38/338 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VCS+ + ++ ++A+KK++ F + I AKR RE++L
Sbjct: 45 TIWEVPERY-QTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 162
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 220
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL I L G+P S + +
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMP 280
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S AR Y+ LP +PK+ F+ F +P+A+DL E+MLV D KRIT EAL HPY S
Sbjct: 281 SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQY 340
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
H+ ++EP P++ FE + E+ K L E +F
Sbjct: 341 HDPDDEPESE-PYDQSFESRQLEIEEWKRLTYEEVCSF 377
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP PF+ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PFDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 35 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 152
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 210
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 271 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 331 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 369
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 36 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 153
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 211
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 332 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 22 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 258 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 318 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 268 bits (686), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 205/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 23 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T+ D MT YV TRW
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA--DEMTGYVATRWYRAP 198
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 319 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 357
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 268 bits (686), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 26 TIWEVPERY-QNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 84
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 143
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 201
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 261
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 262 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 321
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 322 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 360
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 12 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 187
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 308 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 268 bits (685), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 268 bits (684), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 28 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 203
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 324 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 268 bits (684), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 23 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 198
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 319 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 357
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 268 bits (684), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 18 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 314 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 39 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 156
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 214
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 335 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 373
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 27 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 144
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 202
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 323 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 361
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 22 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 318 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 21 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 196
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 317 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 22 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 318 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 28 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 203
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 324 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 28 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 203
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 324 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 35 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 152
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 210
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 271 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 331 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 369
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 18 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 314 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 36 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 153
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 211
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 272 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 332 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 267 bits (683), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 21 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 196
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 317 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 267 bits (683), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 15 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 132
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 190
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 250
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 251 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 310
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 311 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 349
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 267 bits (683), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 12 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 187
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 248 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 308 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 267 bits (683), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 13 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 130
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 188
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 309 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 347
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 267 bits (682), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 14 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 131
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 189
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 249
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 250 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 309
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 310 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 348
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 267 bits (682), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 12 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ + LTDDH Q+ +YQ
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK-LTDDHVQFLIYQ 129
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 187
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 308 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 267 bits (682), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 18 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 314 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 267 bits (682), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 13 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 130
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 188
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 309 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 347
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 267 bits (682), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 266 bits (681), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 23 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T+ D MT YV TRW
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA--DEMTGYVATRWYRAP 198
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ E + ++ K L E ++F P
Sbjct: 319 HDPDDEPVAD-PYDQSLESRDLLIDEWKSLTYDEVISFVP 357
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI D+GLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 39 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 156
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D M YV TRW
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMXGYVATRWYRAP 214
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 335 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 373
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D M +V TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P + FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PTDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 265 bits (678), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D M +V TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 265 bits (678), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 204/340 (60%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 23 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T+ D MT YV TRW
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA--DEMTGYVATRWYRAP 198
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ E + ++ K L E ++F P
Sbjct: 319 HDPDDEPVAD-PYDQSSESRDLLIDEWKSLTYDEVISFVP 357
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 265 bits (678), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P + FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PRDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 265 bits (677), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 12 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D M +V TRW
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAP 187
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 308 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 265 bits (677), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI FGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 265 bits (677), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P + FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PQDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 265 bits (676), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 22 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N + +LKI DFGLAR T D MT YV TRW
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 318 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 264 bits (675), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DF LAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 264 bits (675), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/328 (41%), Positives = 196/328 (59%), Gaps = 37/328 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+P+G GAYG VCSA ++ +++VA+KK++ F + I A+R RE++LL H+ HEN++ +
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D+ P E F++VY+V LM DL+ I++ QAL+D+H Q+ +YQLLRGLKYIHSA
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAG 143
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+ +N +C+L+I DFGLAR E MT YV TRW
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 203 ----------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLP 246
LFPG DY+ QL I E++G+P L + S++AR Y++ LP
Sbjct: 202 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 261
Query: 247 HVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYP 306
+P++ S F +P+AIDL RMLV D +R++ EAL H Y S H+ +EP P
Sbjct: 262 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE-P 320
Query: 307 FNFDFEQTSMNEEDIKELILRECLNFHP 334
++ E E+ KEL +E L+F P
Sbjct: 321 YDESVEAKERTLEEWKELTYQEVLSFKP 348
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 264 bits (675), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI D GLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 264 bits (675), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N + +LKI DFGLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 264 bits (674), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 18 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N + +LKI DFGLAR T D MT YV TRW
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 314 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 264 bits (674), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI D GLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 264 bits (674), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D MT V TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGXVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 264 bits (674), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L PIG GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 21 TIWEVPERY-QNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N + +LKI DFGLAR T D MT YV TRW
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAP 196
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 317 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 264 bits (674), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI D GLAR T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 264 bits (674), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 27 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 144
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N + +LKI DFGLAR T D MT YV TRW
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAP 202
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 323 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 361
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 263 bits (673), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 202/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 36 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 153
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N +C+LKI DFGLAR T D M V TRW
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMXGXVATRWYRAP 211
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 332 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 263 bits (673), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 203/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 21 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++ Q LTDDH Q+ +YQ
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N + +LKI DFGLAR T D MT YV TRW
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAP 196
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ FE + ++ K L E ++F P
Sbjct: 317 HDPDDEPVAD-PYDQSFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 262 bits (669), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 202/340 (59%), Gaps = 38/340 (11%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKL 87
+++V +Y L P+G GAYG VC+A +++T VA+KK++ F + I AKR RE++L
Sbjct: 16 TIWEVPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 88 LCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
L HM HEN++ + D+ P E+FNDVY+V LM DL+ I++S Q LTDDH Q+ +YQ
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKS-QKLTDDHVQFLIYQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
+LRGLKYIHSA+++HRDLKPSNL +N + +LKI DFGL R T D MT YV TRW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD--DEMTGYVATRWYRAP 191
Query: 203 ----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLR 234
TLFPG D++ QL +I L+G+P L +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 235 SDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
S++AR Y++ L +PK F+ F +P+A+DL E+MLV D KRIT +AL H Y +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
H+ ++EP P++ E + ++ K L E ++F P
Sbjct: 312 HDPDDEPVAD-PYDQSLESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 261 bits (667), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 195/326 (59%), Gaps = 37/326 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+P+G GAYG VCSA ++ +++VA+KK++ F + I A+R RE++LL H+ HEN++ +
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D+ P E F++VY+V LM DL+ I++S QAL+D+H Q+ +YQLLRGLKYIHSA
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS-QALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+ +N + +L+I DFGLAR E MT YV TRW
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 203 ----------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLP 246
LFPG DY+ QL I E++G+P L + S++AR Y++ LP
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 247 HVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYP 306
+P++ S F +P+AIDL RMLV D +R++ EAL H Y S H+ +EP P
Sbjct: 270 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE-P 328
Query: 307 FNFDFEQTSMNEEDIKELILRECLNF 332
++ E E+ KEL +E L+F
Sbjct: 329 YDESVEAKERTLEEWKELTYQEVLSF 354
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 194/326 (59%), Gaps = 37/326 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+P+G GAYG VCSA ++ +++VA+KK++ F + I A+R RE++LL H+ HEN++ +
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D+ P E F++VY+V LM DL+ I++ QAL+D+H Q+ +YQLLRGLKYIHSA
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+ +N + +L+I DFGLAR E MT YV TRW
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 203 ----------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLP 246
LFPG DY+ QL I E++G+P L + S++AR Y++ LP
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 247 HVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYP 306
+P++ S F +P+AIDL RMLV D +R++ EAL H Y S H+ +EP P
Sbjct: 270 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE-P 328
Query: 307 FNFDFEQTSMNEEDIKELILRECLNF 332
++ E E+ KEL +E L+F
Sbjct: 329 YDESVEAKERTLEEWKELTYQEVLSF 354
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 248 bits (633), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 186/338 (55%), Gaps = 38/338 (11%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+++ YV P +G GAYG VCSA++ + E+VAIKK++ F + I AKR RE+ LL
Sbjct: 20 WELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLK 78
Query: 90 HMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLL 148
HM HEN++ + D+ P F D Y+V M TDL +I+ K +++ QY +YQ+L
Sbjct: 79 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK--FSEEKIQYLVYQML 136
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW------ 202
+GLKYIHSA V+HRDLKP NL +N +C+LKI DFGLAR MT YVVTRW
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--MTGYVVTRWYRAPEV 194
Query: 203 --------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSD 236
TLF GKDY+ QLT I ++ G P + L
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 254
Query: 237 NARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHE 296
A+ Y++ LP P++ F+Q FP SP A DL E+ML D KR+T +AL HP+ +
Sbjct: 255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD 314
Query: 297 INEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
EE PF+ E + ++ K+ I +E +NF P
Sbjct: 315 PEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 352
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 247 bits (630), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 186/338 (55%), Gaps = 38/338 (11%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+++ YV P +G GAYG VCSA++ + E+VAIKK++ F + I AKR RE+ LL
Sbjct: 38 WELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLK 96
Query: 90 HMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLL 148
HM HEN++ + D+ P F D Y+V M TDL +I+ + +++ QY +YQ+L
Sbjct: 97 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGME--FSEEKIQYLVYQML 154
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW------ 202
+GLKYIHSA V+HRDLKP NL +N +C+LKI DFGLAR MT YVVTRW
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--MTGYVVTRWYRAPEV 212
Query: 203 --------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSD 236
TLF GKDY+ QLT I ++ G P + L
Sbjct: 213 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 272
Query: 237 NARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHE 296
A+ Y++ LP P++ F+Q FP SP A DL E+ML D KR+T +AL HP+ +
Sbjct: 273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRD 332
Query: 297 INEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHP 334
EE PF+ E + ++ K+ I +E +NF P
Sbjct: 333 PEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 370
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 200/358 (55%), Gaps = 39/358 (10%)
Query: 14 PLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFD 73
P G Y Q + ++V + Y LQP+G GAYG VCSAV+ T +VAIKK+ F
Sbjct: 6 PARSGFYRQ-EVTKTAWEVRAVY-RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ 63
Query: 74 NRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSK 132
+ + AKR RE++LL HM HEN++ + D+ P + + F D Y+V M TDL ++++ +
Sbjct: 64 SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE 123
Query: 133 QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
+ L +D Q+ +YQ+L+GL+YIH+A ++HRDLKP NL +N +C+LKI DFGLAR
Sbjct: 124 K-LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE- 181
Query: 193 FMTEYVVTRW--------------------------------DTLFPGKDYVQQLTMITE 220
M VVTRW TLF G D++ QL I +
Sbjct: 182 -MXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK 240
Query: 221 LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRI 280
+ G+P + L+SD A+ Y+K LP + K+ F+ N SP+A++L E+MLV D +R+
Sbjct: 241 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRV 300
Query: 281 TVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLNFHPDHML 338
T EAL HPY SLH+ +EP ++ F+ ++ K + +E L+F P L
Sbjct: 301 TAGEALAHPYFESLHDTEDEPQVQ-KYDDSFDDVDRTLDEWKRVTYKEVLSFKPPRQL 357
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 185/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 30 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 147
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 208 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 266
Query: 248 VPKQPFSQKFPN------------MSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 267 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 326
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 327 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 363
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 185/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 184
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 303
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 304 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 363
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 364 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 400
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 185/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 30 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 89
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 147
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 208 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 266
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 267 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 326
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 327 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 363
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 185/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 326 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 362
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 185/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 326 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 362
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 185/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 28 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 87
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 145
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 205
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 206 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 264
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 265 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 324
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 325 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 361
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 185/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 23 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 82
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 140
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 201 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 259
Query: 248 VPKQPFSQKFPN------------MSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 260 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 319
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 320 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 356
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 185/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 139
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 199
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 200 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 258
Query: 248 VPKQPFSQKFPN------------MSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 259 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 318
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 319 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 355
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 185/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 126
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 184
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 303
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 304 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 363
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 364 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 400
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 185/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 23 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 82
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 140
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 201 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 259
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 260 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 319
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 320 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 356
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 190/359 (52%), Gaps = 49/359 (13%)
Query: 18 GKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRID 77
++ + + F V +Y L+PIG GA GIVC+A ++ VA+KK++ F N+
Sbjct: 6 SQFYSVQVADSTFTVLKRY-QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH 64
Query: 78 AKRILREIKLLCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALT 136
AKR RE+ LL + H+NI+ + ++ P E+F DVY+V ELMD +L Q+I + L
Sbjct: 65 AKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME--LD 122
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTE 196
+ Y LYQ+L G+K++HSA ++HRDLKPSN+++ ++C LKI DFGLART S MT
Sbjct: 123 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTP 182
Query: 197 YVVTRW-------------------------------DTLFPGKDYVQQLTMITELLGSP 225
YVVTR+ +F G D++ Q + E LG+P
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP 242
Query: 226 DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNM------------SPVAIDLAERMLV 273
+ L+ R YV+ P P F + FP+ + A DL +MLV
Sbjct: 243 SAEFMAALQP-TVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLV 301
Query: 274 FDPAKRITVEEALNHPYLSSLHEINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
DP KRI+V+EAL HPY++ ++ E E P ++ E+ E+ KELI +E ++
Sbjct: 302 IDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREHAIEEWKELIYKEVMD 360
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 208 bits (529), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 184/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++ LKI DFGLART + MT YVVTR
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 265
Query: 248 VPKQPFSQKFPN------------MSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 326 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 362
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 207 bits (527), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 184/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++ LKI DFGLART + MT YVVTR
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 265
Query: 248 VPKQPFSQKFPN------------MSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 326 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 362
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 184/337 (54%), Gaps = 48/337 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSAG 139
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++ LKI DFGLART + MT YVVTR
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 199
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 200 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 258
Query: 248 VPKQPFSQKFPN------------MSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 259 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 318
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ E E P ++ ++ E+ KELI +E +N
Sbjct: 319 DPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMN 355
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 190/359 (52%), Gaps = 49/359 (13%)
Query: 19 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA 78
++ + + F V +Y L+PIG GA GIVC+A ++ VA+KK++ F N+ A
Sbjct: 9 QFYSVEVADSTFTVLKRY-QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA 67
Query: 79 KRILREIKLLCHMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTD 137
KR RE+ LL + H+NI+ + ++ P E+F DVY+V ELMD +L Q+I + L
Sbjct: 68 KRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME--LDH 125
Query: 138 DHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEY 197
+ Y LYQ+L G+K++HSA ++HRDLKPSN+++ ++C LKI DFGLART MT Y
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPY 185
Query: 198 VVTR-------------------WD------------TLFPGKDYVQQLTMITELLGSPD 226
VVTR W +F G D++ Q + E LG+P
Sbjct: 186 VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPS 245
Query: 227 DSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNM------------SPVAIDLAERMLVF 274
+ L+ R YV+ P P F + FP+ + A DL +MLV
Sbjct: 246 AEFMAALQP-TVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 275 DPAKRITVEEALNHPYLSSLHEINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
DP KRI+V+EAL HPY++ ++ E E P ++ E+ E+ KELI +E +++
Sbjct: 305 DPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREHAIEEWKELIYKEVMDW 363
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 186/338 (55%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 34 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 93
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 94 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 151
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 211
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 212 DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPK 270
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 271 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 330
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 331 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 368
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 185/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR+
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 203 ---------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
LFPG D++ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 326 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 186/338 (55%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 23 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 82
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 83 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 140
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 201 DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPK 259
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 260 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 319
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 320 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 357
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 204 bits (518), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 185/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR+
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 203 ---------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
LFPG D++ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 326 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 184/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+++ ++ LKI DFGLART + MT YVVTR+
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 203 ---------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
LFPG D++ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 326 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 184/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+++ ++ LKI DFGLART + MT YVVTR+
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 203 ---------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
LFPG D++ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 326 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 185/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 89
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 147
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR+
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 203 ---------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
LFPG D++ Q + E LG+P + L+ R YV+ P
Sbjct: 208 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPK 266
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 267 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 326
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 327 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 364
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 185/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+++ ++C LKI DFGLART + MT YVVTR+
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 203 ---------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
LFPG D++ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 326 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 184/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+++ ++ LKI DFGLART + MT YVVTR+
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 203 ---------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
LFPG D++ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 326 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 201 bits (512), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 184/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+++ ++ LKI DFGLART + MT YVVTR+
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 203 ---------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
LFPG D++ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 326 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 201 bits (510), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 187/388 (48%), Gaps = 98/388 (25%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G+YG VC A + K VAIKKI F++ ID KRILREI +L + H+++VKV DI
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHR 162
+ P D EKF+++Y+V E+ D+D ++ R+ LT+ H + LY LL G+KY+HSA +LHR
Sbjct: 121 VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHR 180
Query: 163 DLKPSNLLLNANCDLKICDFGLARTTS--------------ETDF--------------M 194
DLKP+N L+N +C +K+CDFGLART E D +
Sbjct: 181 DLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQL 240
Query: 195 TEYVVTRW-----------------DTLFPGKDYVQQLTMITELLG-------------- 223
T +VVTRW D G + + L MI E +
Sbjct: 241 TGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSC 300
Query: 224 ---SPD-----------------------------DSDLGFLRSDNARRYVKQLPHVPKQ 251
SPD + D+ L ++A+RY++ P
Sbjct: 301 FPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGT 360
Query: 252 PFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH----EINEEPTCPYPF 307
+++FP S AI L +RMLVF+P KRIT+ E L HP+ + E N PF
Sbjct: 361 DLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNATEKVRLPF 420
Query: 308 NFDFEQTSMNEEDIKELILRECLNFHPD 335
N + +M+E ++ ++E +HP+
Sbjct: 421 N---DWMNMDEPQLRYAFVKEIQRYHPE 445
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 200 bits (509), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 183/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIV +A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+++ ++ LKI DFGLART + MT YVVTR+
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 203 ---------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
LFPG D++ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP-TVRTYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 326 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 185/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + M VVTR
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENV 206
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQP-TVRNYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 326 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 184/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 31 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 90
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 148
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+++ ++C LKI DFGLART + M +VVTR+
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENV 208
Query: 203 ---------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
LFPG D++ Q + E LG+P + L+ R YV+ P
Sbjct: 209 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPK 267
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 268 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 327
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 328 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 365
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 182/346 (52%), Gaps = 58/346 (16%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
F V +Y L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+
Sbjct: 20 FTVLKRY-QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 90 HMTHENIVKVKDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLL 148
+ H+NI+ + ++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQML 136
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR------- 201
G+K++HSA ++HRDLKPSN+++ ++ LKI DFGLART + MT YVVTR
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 202 ------------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDN 237
W LFPG+DY+ Q + E LG+P + L+
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-T 255
Query: 238 ARRYVKQLPHVPKQPFSQKFPN------------MSPVAIDLAERMLVFDPAKRITVEEA 285
R YV+ P F + FP+ + A DL +MLV DPAKRI+V++A
Sbjct: 256 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 315
Query: 286 LNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
L HPY++ Y ++ E+ KELI +E +N
Sbjct: 316 LQHPYINVW----------YXXXXXXDEREHTIEEWKELIYKEVMN 351
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 184/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++C LKI DFGLART + M VVTR
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENV 206
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 326 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 180/336 (53%), Gaps = 55/336 (16%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVY+V ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR----------------- 201
++HRDLKPSN+++ ++ LKI DFGLART + MT YVVTR
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 202 --WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
W LFPG+DY+ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP-TVRNYVENRPK 265
Query: 248 VPKQPFSQKFPN------------MSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP+ + A DL +MLV DPAKRI+V++AL HPY++ +
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 325
Query: 296 EINEEPTCPYPFNFDFEQTSMNEEDIKELILRECLN 331
+ P E+ EE KELI +E +N
Sbjct: 326 D-------PAXXXXXDEREHTIEE-WKELIYKEVMN 353
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 184/338 (54%), Gaps = 48/338 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+PIG GA GIVC+A ++ + VAIKK++ F N+ AKR RE+ L+ + H+NI+ +
Sbjct: 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88
Query: 100 KDIIPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++ P E+F DVYIV ELMD +L Q+I+ + L + Y LYQ+L G+K++HSA
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAG 146
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---------------- 202
++HRDLKPSN+++ ++C LKI DFGLART + MT VVTR+
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENV 206
Query: 203 ---------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPH 247
LFPG D++ Q + E LG+P + L+ R YV+ P
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP-TVRTYVENRPK 265
Query: 248 VPKQPFSQKFPNM------------SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH 295
F + FP++ + A DL +MLV D +KRI+V+EAL HPY++ +
Sbjct: 266 YAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 325
Query: 296 EINE-EPTCPYPFNFDFEQTSMNEEDIKELILRECLNF 332
+ +E E P + ++ E+ KELI +E ++
Sbjct: 326 DPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEVMDL 363
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 189/378 (50%), Gaps = 86/378 (22%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IGRG+YG V A + T++ VAIKK+ F++ ID KRILREI +L + + I+++ D+
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHR 162
I P D KF+++YIV E+ D+DL ++ ++ LT++H + LY LL G +IH + ++HR
Sbjct: 94 IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHR 153
Query: 163 DLKPSNLLLNANCDLKICDFGLART-TSETDF----------------------MTEYVV 199
DLKP+N LLN +C +K+CDFGLART SE D +T +VV
Sbjct: 154 DLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV 213
Query: 200 TRWDT-------------------------------------------LFPG-------- 208
TRW LFPG
Sbjct: 214 TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSP 273
Query: 209 ---------KDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN 259
K QL +I ++G+P + DL + +Y+K PH QK+P+
Sbjct: 274 DRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPS 333
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE--PTCPYPFNFDFEQTSMN 317
+S I+L E ML F+P KRIT+++AL+HPYL + + E T FD + ++
Sbjct: 334 ISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIILPFD-DWMVLS 392
Query: 318 EEDIKELILRECLNFHPD 335
E ++ + L+E +FHP+
Sbjct: 393 ETQLRYIFLKEVQSFHPE 410
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 164/320 (51%), Gaps = 45/320 (14%)
Query: 18 GKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI--------- 68
G+ +++ L + S Y + I G+YG VC+ V+SE VAIK++
Sbjct: 6 GEAAMRDLIAELHAMQSPYTVQ-RFISSGSYGAVCAGVDSEGIP-VAIKRVFNTVSDGRT 63
Query: 69 TNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQI 128
N + KR+LREI+LL H H NI+ ++DI ++ + +Y+V ELM TDL Q+
Sbjct: 64 VNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQV 123
Query: 129 IRSKQ-ALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
I ++ ++ H QYF+Y +L GL +H A V+HRDL P N+LL N D+ ICDF LAR
Sbjct: 124 IHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 188 TSETDFMTEYVVTRW--------------------------------DTLFPGKDYVQQL 215
+ T YV RW LF G + QL
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 216 TMITELLGSPDDSDLGFLRSDNARRYVK-QLPHVPKQPFSQKFPNMSPVAIDLAERMLVF 274
I E++G+P D+ S +AR Y++ L +VP + ++ P PVA+DL +ML F
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303
Query: 275 DPAKRITVEEALNHPYLSSL 294
+P +RI+ E+AL HPY SL
Sbjct: 304 NPQRRISTEQALRHPYFESL 323
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 164/320 (51%), Gaps = 45/320 (14%)
Query: 18 GKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI--------- 68
G+ +++ L + S Y + I G+YG VC+ V+SE VAIK++
Sbjct: 6 GEAAMRDLIAELHAMQSPYTVQ-RFISSGSYGAVCAGVDSEGIP-VAIKRVFNTVSDGRT 63
Query: 69 TNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQI 128
N + KR+LREI+LL H H NI+ ++DI ++ + +Y+V ELM TDL Q+
Sbjct: 64 VNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQV 123
Query: 129 IRSKQ-ALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
I ++ ++ H QYF+Y +L GL +H A V+HRDL P N+LL N D+ ICDF LAR
Sbjct: 124 IHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 188 TSETDFMTEYVVTRW--------------------------------DTLFPGKDYVQQL 215
+ T YV RW LF G + QL
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 216 TMITELLGSPDDSDLGFLRSDNARRYVK-QLPHVPKQPFSQKFPNMSPVAIDLAERMLVF 274
I E++G+P D+ S +AR Y++ L +VP + ++ P PVA+DL +ML F
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303
Query: 275 DPAKRITVEEALNHPYLSSL 294
+P +RI+ E+AL HPY SL
Sbjct: 304 NPQRRISTEQALRHPYFESL 323
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 183/380 (48%), Gaps = 87/380 (22%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IGRG+YG V A + + VAIKK+ F++ ID KRILREI +L + + I+++ D+
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDL 95
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHR 162
I P D KF+++YIV E+ D+DL ++ ++ LT+ H + LY LL G K+IH + ++HR
Sbjct: 96 IIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHR 155
Query: 163 DLKPSNLLLNANCDLKICDFGLART-TSETDF-------------------------MTE 196
DLKP+N LLN +C +KICDFGLART S+ D +T
Sbjct: 156 DLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTS 215
Query: 197 YVVTRWDT-------------------------------------------LFPG----- 208
+VVTRW LFPG
Sbjct: 216 HVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFP 275
Query: 209 ------------KDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQK 256
K QL +I ++G+P + DL + +Y+K P S+K
Sbjct: 276 LSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKK 335
Query: 257 FPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQ-TS 315
+ ++S IDL E ML F+ KRIT+++AL+HPYL + + N E F+
Sbjct: 336 YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLENFSTEKIILPFDDWMV 395
Query: 316 MNEEDIKELILRECLNFHPD 335
++E ++ + L+E +FH D
Sbjct: 396 LSETQLRYIFLKEIQSFHAD 415
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 75/337 (22%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMT-HENIVK 98
++ +G+GAYGIV +++ T E VA+KKI +AF N DA+R REI +L ++ HENIV
Sbjct: 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVN 73
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ +++ D ++ DVY+V++ M+TDLH +IR+ L H QY +YQL++ +KY+HS
Sbjct: 74 LLNVLRA-DNDR--DVYLVFDYMETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLART------------------TSETD----FMTE 196
+LHRD+KPSN+LLNA C +K+ DFGL+R+ T D +T+
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 197 YVVTRW--------------------------------DTLFPGKDYVQQLTMITELLGS 224
YV TRW +FPG + QL I ++
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDF 249
Query: 225 PDDSDLGFLRSDNARRYVKQLP------HVPKQPFSQKFPNM----------SPVAIDLA 268
P + D+ ++S A+ ++ L K+ K+ N+ + A+DL
Sbjct: 250 PSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLL 309
Query: 269 ERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPY 305
+++L F+P KRI+ +AL HP++S H NEEP C +
Sbjct: 310 DKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDH 346
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 177 bits (449), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 170/315 (53%), Gaps = 53/315 (16%)
Query: 24 NILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR 83
NI G F + S+Y+ L+P+G G G+V SAV+++ + VAIKKI + K LR
Sbjct: 3 NIHG--FDLGSRYMD-LKPLGCGGNGLVFSAVDNDCDKRVAIKKIV--LTDPQSVKHALR 57
Query: 84 EIKLLCHMTHENIVKVKDIIPPMDKE---------KFNDVYIVYELMDTDLHQIIRSKQA 134
EIK++ + H+NIVKV +I+ P + + N VYIV E M+TDL ++ +
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE-QGP 116
Query: 135 LTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA-NCDLKICDFGLARTT----S 189
L ++H + F+YQLLRGLKYIHSANVLHRDLKP+NL +N + LKI DFGLAR S
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYS 176
Query: 190 ETDFMTEYVVTRW--------------------------------DTLFPGKDYVQQLTM 217
++E +VT+W TLF G ++Q+ +
Sbjct: 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQL 236
Query: 218 ITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPA 277
I E + + D L S Y++ P +P +Q P +S A+D E++L F P
Sbjct: 237 ILESIPVVHEEDRQELLS-VIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPM 295
Query: 278 KRITVEEALNHPYLS 292
R+T EEAL+HPY+S
Sbjct: 296 DRLTAEEALSHPYMS 310
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 145/289 (50%), Gaps = 41/289 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT-NAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G G YG+V A +S+ + VA+K+I +A D I + I REI LL + H NIV
Sbjct: 26 LEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAI-REISLLKELHHPNIVS 83
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQII-RSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ D+I + +V+E M+ DL +++ +K L D + +LYQLLRG+ + H
Sbjct: 84 LIDVI-----HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW----DTLFPGKDYV 212
+LHRDLKP NLL+N++ LK+ DFGLAR T VVT W D L K Y
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 213 QQL----------TMITE---LLGSPDDSDL----GFLRSDNARRY--VKQLPH------ 247
+ MIT G DD L L + N R + V++LP
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258
Query: 248 --VPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
K+P+S P IDL ML FDP KRI+ +A+NHPY L
Sbjct: 259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 146/289 (50%), Gaps = 41/289 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT-NAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G G YG+V A +S+ + VA+K+I +A D I + I REI LL + H NIV
Sbjct: 26 LEKVGEGTYGVVYKAKDSQGRI-VALKRIRLDAEDEGIPSTAI-REISLLKELHHPNIVS 83
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQII-RSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ D+I + +V+E M+ DL +++ +K L D + +LYQLLRG+ + H
Sbjct: 84 LIDVI-----HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW----DTLFPGKDYV 212
+LHRDLKP NLL+N++ LK+ DFGLAR T VVT W D L K Y
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 213 QQL------TMITELL-------GSPDDSDL----GFLRSDNARRY--VKQLPH------ 247
+ + E++ G DD L L + N R + V++LP
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258
Query: 248 --VPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
K+P+S P IDL ML FDP KRI+ +A+NHPY L
Sbjct: 259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 138/301 (45%), Gaps = 68/301 (22%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG G YG V A N ET E VA+K++ D+ LREI LL + H+NIV++
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSAN 158
D++ K + +V+E D DL + S L + + FL+QLL+GL + HS N
Sbjct: 67 HDVLHSDKK-----LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW--------------- 202
VLHRDLKP NLL+N N +LK+ DFGLAR + VVT W
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 203 ------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQ 244
LFPG D QL I LLG+P + +Q
Sbjct: 182 SIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTE---------------EQ 226
Query: 245 LPHVPKQPFSQKF-------------PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P + K P + + P ++ DL + +L +P +RI+ EEAL HPY
Sbjct: 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
Query: 292 S 292
S
Sbjct: 287 S 287
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 75 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 188
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 246
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 75 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 188
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 246
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 68 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 239
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 68 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 239
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 68 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 239
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 68 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 239
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 67 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 238
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 72 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 243
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 67 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 238
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 69 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 182
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 240
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 138/301 (45%), Gaps = 68/301 (22%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG G YG V A N ET E VA+K++ D+ LREI LL + H+NIV++
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSAN 158
D++ K + +V+E D DL + S L + + FL+QLL+GL + HS N
Sbjct: 67 HDVLHSDKK-----LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW--------------- 202
VLHRDLKP NLL+N N +LK+ +FGLAR + VVT W
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181
Query: 203 ------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQ 244
LFPG D QL I LLG+P + +Q
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE---------------EQ 226
Query: 245 LPHVPKQPFSQKF-------------PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P + K P + + P ++ DL + +L +P +RI+ EEAL HPY
Sbjct: 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
Query: 292 S 292
S
Sbjct: 287 S 287
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 134/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E +D DL + + + ALT + +L+QLL+GL + HS
Sbjct: 71 LDVI-----HTENKLYLVFEHVDQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 242
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 71 LDVI-----HTENKLYLVFEFLSMDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 242
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 69 LDVI-----HTENKLYLVFEFLSMDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 240
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 71 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 242
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 70 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 241
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 69 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 240
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 71 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 242
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 68 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 239
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 70 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 241
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 70 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 241
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 69 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 240
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 68 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 239
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 68 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 239
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 67 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 238
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 69 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 240
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+ KI + +REI LL + H NIVK+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 68 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 239
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+ KI + +REI LL + H NIVK+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 67 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 238
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 72 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 185
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 243
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 67 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 238
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + + ALT + +L+QLL+GL + HS
Sbjct: 68 LDVI-----HTENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 239
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 132/288 (45%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + ALT + +L+QLL+GL + HS
Sbjct: 70 LDVI-----HTENKLYLVFEFLSMDLKDFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 241
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 39/291 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G+YG+V N +T + VAIKK + D+ + K LREI++L + H N+V + ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 103 IPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLH 161
+ +++V+E D T LH++ R ++ + + + +Q L+ + + H N +H
Sbjct: 71 F-----RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125
Query: 162 RDLKPSNLLLNANCDLKICDFGLAR-TTSETDFMTEYVVTRW---------DT------- 204
RD+KP N+L+ + +K+CDFG AR T +D+ + V TRW DT
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVD 185
Query: 205 ----------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHV 248
L+PGK V QL +I + LG ++ VK
Sbjct: 186 VWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPE 245
Query: 249 PKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
+P KFPN+S A+ L + L DP +R+T E+ L+HPY ++ EI +
Sbjct: 246 DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIED 296
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 132/288 (45%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + ALT + +L+QLL+GL + HS
Sbjct: 71 LDVI-----HTENKLYLVFEFLSMDLKDFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 242
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 133/288 (46%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + ALT + +L+QLL+GL + HS
Sbjct: 67 LDVI-----HTENKLYLVFEHVHQDLKTFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR T VVT W
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 238
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 132/288 (45%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + ALT + +L+QLL+GL + HS
Sbjct: 71 LDVI-----HTENKLYLVFEFLHQDLKTFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 242
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 132/288 (45%), Gaps = 44/288 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G YG+V A N T E VA+KKI + +REI LL + H NIVK+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD---DHCQYFLYQLLRGLKYIHS 156
D+I N +Y+V+E + DL + + ALT + +L+QLL+GL + HS
Sbjct: 68 LDVI-----HTENKLYLVFEFLHQDLKDFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW------------- 202
VLHRDLKP NLL+N +K+ DFGLAR VVT W
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 203 -------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
LFPG + QL I LG+PD+ + S Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKP 239
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P +Q FS+ P + L +ML +DP KRI+ + AL HP+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 147/300 (49%), Gaps = 46/300 (15%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
FQ KY L +G G+YG+V N +T VAIKK + D+++ K +REIKLL
Sbjct: 21 FQSMEKY-ENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLK 79
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQYFLYQLL 148
+ HEN+V + ++ +K Y+V+E +D T L + L Q +L+Q++
Sbjct: 80 QLRHENLVNLLEVC-----KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQII 134
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART-TSETDFMTEYVVTRW----- 202
G+ + HS N++HRD+KP N+L++ + +K+CDFG ART + + + V TRW
Sbjct: 135 NGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPE 194
Query: 203 ---------------------------DTLFPGKDYVQQLTMITELLGS--PDDSDLGFL 233
+ LFPG + QL I LG+ P + L
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQE---L 251
Query: 234 RSDNARRYVKQLPHVP-KQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLS 292
+ N +LP + ++P +++P +S V IDLA++ L DP KR E L+H +
Sbjct: 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 133/292 (45%), Gaps = 43/292 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L +G G Y V + T VA+K+I + I RE+ LL + H NIV +
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTL 65
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDH-CQYFLYQLLRGLKYIHSAN 158
DII EK + +V+E +D DL Q + + + H + FL+QLLRGL Y H
Sbjct: 66 HDII---HTEK--SLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTS-----------------------ETDFMT 195
VLHRDLKP NLL+N +LK+ DFGLAR S TD+ T
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYST 180
Query: 196 E----------YVVTRWDTLFPGKDYVQQLTMITELLGSPDDSDL-GFLRSDNARRYVKQ 244
+ Y + LFPG +QL I +LG+P + G L ++ + Y
Sbjct: 181 QIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY--N 238
Query: 245 LPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHE 296
P + P + DL ++L F+ RI+ E+A+ HP+ SL E
Sbjct: 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 127/286 (44%), Gaps = 42/286 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG G YG+V A N+ E A+KKI ++ +REI +L + H NIVK+
Sbjct: 7 LEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIR-SKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D+I + + +V+E +D DL +++ + L + FL QLL G+ Y H
Sbjct: 66 YDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW--------------- 202
VLHRDLKP NLL+N +LKI DFGLAR T VVT W
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 203 -----------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQL 245
LFPG QL I +LG+P+ + + +Y
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN--WPNVTELPKYDPNF 238
Query: 246 PHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P+ + IDL +ML DP +RIT ++AL H Y
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 127/286 (44%), Gaps = 42/286 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG G YG+V A N+ E A+KKI ++ +REI +L + H NIVK+
Sbjct: 7 LEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIR-SKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D+I + + +V+E +D DL +++ + L + FL QLL G+ Y H
Sbjct: 66 YDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW--------------- 202
VLHRDLKP NLL+N +LKI DFGLAR T VVT W
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 203 -----------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQL 245
LFPG QL I +LG+P+ + + +Y
Sbjct: 181 TIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKN--WPNVTELPKYDPNF 238
Query: 246 PHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P+ + IDL +ML DP +RIT ++AL H Y
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 127/286 (44%), Gaps = 42/286 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG G YG+V A N+ E A+KKI ++ +REI +L + H NIVK+
Sbjct: 7 LEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIR-SKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D+I + + +V+E +D DL +++ + L + FL QLL G+ Y H
Sbjct: 66 YDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW--------------- 202
VLHRDLKP NLL+N +LKI DFGLAR T +VT W
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 203 -----------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQL 245
LFPG QL I +LG+P+ + + +Y
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN--WPNVTELPKYDPNF 238
Query: 246 PHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
P+ + IDL +ML DP +RIT ++AL H Y
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 139/303 (45%), Gaps = 51/303 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-----RILREIKLLCHMTHENIV 97
+G G + V A + T + VAIKKI +R +AK LREIKLL ++H NI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIK--LGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 98 KVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQ-ALTDDHCQYFLYQLLRGLKYIHS 156
+ D +++ +V++ M+TDL II+ LT H + ++ L+GL+Y+H
Sbjct: 76 GLLDAF-----GHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLART-TSETDFMTEYVVTRW----DTLF----- 206
+LHRDLKP+NLLL+ N LK+ DFGLA++ S VVTRW + LF
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMY 190
Query: 207 -----------------------PGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
PG + QLT I E LG+P + + S K
Sbjct: 191 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 250
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTC 303
P + P F +DL + + +F+P RIT +AL Y S+ P C
Sbjct: 251 SFPGI---PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN--RPGPTPGC 305
Query: 304 PYP 306
P
Sbjct: 306 QLP 308
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 150/321 (46%), Gaps = 58/321 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKI--TNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
IG G++G+V A ++ E VAIKK+ AF NR E++++ + H NIV+++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVRLR 79
Query: 101 DIIPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYI 154
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YI
Sbjct: 80 YFFY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 155 HSANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR------------ 201
HS + HRD+KP NLLL+ + LK+CDFG A+ + Y+ +R
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198
Query: 202 --------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRY 241
W +FPG V QL I ++LG+P +R N
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 255
Query: 242 VKQLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE 300
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N +
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVK 315
Query: 301 -PT---CPYPFNFDFEQTSMN 317
P P FNF ++ S N
Sbjct: 316 LPNGRDTPALFNFTTQELSSN 336
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 58/321 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKI--TNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
IG G++G+V A ++ E VAIKK+ AF NR E++++ + H NIV+++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVRLR 79
Query: 101 DIIPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYI 154
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YI
Sbjct: 80 YFFY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 155 HSANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR------------ 201
HS + HRD+KP NLLL+ + LK+CDFG A+ + Y+ +R
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198
Query: 202 --------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRY 241
W +FPG V QL I ++LG+P +R N
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 255
Query: 242 VKQLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE 300
P + P+++ F P P AI L R+L + P R+T EA H + L + N +
Sbjct: 256 EFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVK 315
Query: 301 -PT---CPYPFNFDFEQTSMN 317
P P FNF ++ S N
Sbjct: 316 LPNGRDTPALFNFTTQELSSN 336
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 81
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 82 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + Y+ +R
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 257
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 258 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 317
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 318 NGRDTPALFNFTTQELSSN 336
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 94
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 95 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + Y+ +R
Sbjct: 154 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 213
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 214 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 270
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 271 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 330
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 331 NGRDTPALFNFTTQELSSN 349
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 86
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 87 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + Y+ +R
Sbjct: 146 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 205
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 206 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 262
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 263 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 322
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 323 NGRDTPALFNFTTQELSSN 341
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 160
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 161 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + Y+ +R
Sbjct: 220 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 279
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 280 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 336
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 337 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 396
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 397 NGRDTPALFNFTTQELSSN 415
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 109
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 110 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + Y+ +R
Sbjct: 169 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 228
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 229 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 285
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 286 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 345
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 346 NGRDTPALFNFTTQELSSN 364
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 119
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 120 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + Y+ +R
Sbjct: 179 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 238
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 239 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 295
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 296 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 355
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 356 NGRDTPALFNFTTQELSSN 374
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 115
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 116 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + Y+ +R
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 234
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 235 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 291
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 292 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 351
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 352 NGRDTPALFNFTTQELSSN 370
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 117
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 118 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + Y+ +R
Sbjct: 177 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 236
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 237 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 293
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 294 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 353
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 354 NGRDTPALFNFTTQELSSN 372
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 58/307 (18%)
Query: 33 SSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMT 92
SS L+ +G G Y V +N T VA+K++ + + I REI L+ +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI-REISLMKELK 61
Query: 93 HENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK------QALTDDHCQYFLYQ 146
HENIV++ D+I N + +V+E MD DL + + S+ + L + +YF +Q
Sbjct: 62 HENIVRLYDVI-----HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVTRW--- 202
LL+GL + H +LHRDLKP NLL+N LK+ DFGLAR + + VVT W
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176
Query: 203 -----------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFL 233
LFPG + +QL +I +++G+P++S
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNES----- 231
Query: 234 RSDNARRYVKQLPHVPKQPFSQKFPNMSPVA--------IDLAERMLVFDPAKRITVEEA 285
+ + K P++ ++P + P +D +L +P R++ ++A
Sbjct: 232 LWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA 291
Query: 286 LNHPYLS 292
L+HP+ +
Sbjct: 292 LHHPWFA 298
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 148/321 (46%), Gaps = 58/321 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKI--TNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
IG G++G+V A ++ E VAIKK+ AF NR E++++ + H NIV+++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVRLR 79
Query: 101 DIIPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYI 154
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YI
Sbjct: 80 YFFY-SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 155 HSANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR------------ 201
HS + HRD+KP NLLL+ + LK+CDFG A+ + + +R
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 202 --------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRY 241
W +FPG V QL I ++LG+P +R N
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYT 255
Query: 242 VKQLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE 300
P + P+++ F P P AI L R+L + P R+T EA H + L + N +
Sbjct: 256 EFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVK 315
Query: 301 -PT---CPYPFNFDFEQTSMN 317
P P FNF ++ S N
Sbjct: 316 LPNGRDTPALFNFTTQELSSN 336
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 85
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 86 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + + +R
Sbjct: 145 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 204
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 205 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 261
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 262 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 321
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 322 NGRDTPALFNFTTQELSSN 340
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 81
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 82 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + + +R
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 257
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 258 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 317
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 318 NGRDTPALFNFTTQELSSN 336
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 81
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 82 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + + +R
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 257
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 258 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 317
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 318 NGRDTPALFNFTTQELSSN 336
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 89
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 90 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + + +R
Sbjct: 149 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 208
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 209 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 265
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 266 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 325
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 326 NGRDTPALFNFTTQELSSN 344
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 100
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 101 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + + +R
Sbjct: 160 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 219
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 220 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 276
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 277 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 336
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 337 NGRDTPALFNFTTQELSSN 355
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 82
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 83 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + + +R
Sbjct: 142 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 201
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 202 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 258
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 259 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 318
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 319 NGRDTPALFNFTTQELSSN 337
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 93
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 94 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + + +R
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 212
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 213 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 269
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 270 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 329
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 330 NGRDTPALFNFTTQELSSN 348
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 93
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 94 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + + +R
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 212
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 213 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 269
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 270 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 329
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 330 NGRDTPALFNFTTQELSSN 348
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 153/327 (46%), Gaps = 55/327 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A E+ +EVAIKK+ D R RE++++ + H N+V +K
Sbjct: 48 IGNGSFGVVFQAKLVES-DEVAIKKVLQ--DKRFKN----RELQIMRIVKHPNVVDLKAF 100
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIRS----KQALTDDHCQYFLYQLLRGLKYIHS 156
+ +K ++V++ V E + +++ R KQ + + ++YQLLR L YIHS
Sbjct: 101 FY-SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ LK+ DFG A+ + + +R
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNY 219
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W T LFPG+ + QL I ++LG+P +++ N
Sbjct: 220 TTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ---IKTMNPNYMEH 276
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLH----EIN 298
+ P + PFS+ F P P AIDL R+L + P+ R+T EAL HP+ L +
Sbjct: 277 KFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARMP 336
Query: 299 EEPTCPYPFNFDFEQTSMNEEDIKELI 325
P FN+ E+ S+ + I L+
Sbjct: 337 NGRELPPLFNWTKEELSVRPDLISRLV 363
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 148/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 115
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK ++VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 116 FY-SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + + +R
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 234
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 235 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 291
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 292 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 351
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 352 NGRDTPALFNFTTQELSSN 370
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 147/319 (46%), Gaps = 54/319 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G++G+V A ++ E VAIKK+ D R RE++++ + H NIV+++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQ--DKRFKN----RELQIMRKLDHCNIVRLRYF 81
Query: 103 IPPMDKEKFNDVYI--VYELMDTDLHQIIR----SKQALTDDHCQYFLYQLLRGLKYIHS 156
EK + VY+ V + + ++++ R +KQ L + + ++YQL R L YIHS
Sbjct: 82 FY-SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 157 ANVLHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTR-------------- 201
+ HRD+KP NLLL+ + LK+CDFG A+ + + +R
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 202 ------WDT------------LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
W +FPG V QL I ++LG+P +R N
Sbjct: 201 TSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ---IREMNPNYTEF 257
Query: 244 QLPHVPKQPFSQKF-PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEE-P 301
+ P + P+++ F P P AI L R+L + P R+T EA H + L + N + P
Sbjct: 258 KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLP 317
Query: 302 T---CPYPFNFDFEQTSMN 317
P FNF ++ S N
Sbjct: 318 NGRDTPALFNFTTQELSSN 336
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 128/302 (42%), Gaps = 72/302 (23%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V A+++ T E VAIK+I + +RE+ LL + H NI+++K +
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHR 162
I + +++++E + DL + + ++ + FLYQL+ G+ + HS LHR
Sbjct: 102 I-----HHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHR 156
Query: 163 DLKPSNLLLNANCD-----LKICDFGLARTTS-ETDFMTEYVVTRW-------------- 202
DLKP NLLL+ + LKI DFGLAR T ++T W
Sbjct: 157 DLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYS 216
Query: 203 ------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQ 244
LFPG + QL I E+LG PDD+
Sbjct: 217 TSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDT---------------T 261
Query: 245 LPHVPKQP-FSQKFPNMSPVAID-------------LAERMLVFDPAKRITVEEALNHPY 290
P V P + Q FP + L ML DP KRI+ + AL HPY
Sbjct: 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321
Query: 291 LS 292
S
Sbjct: 322 FS 323
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 134/294 (45%), Gaps = 41/294 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEE-VAIKKITNAFDNRIDAKRILREIKLLCHMT---HENIVK 98
IG GAYG V A + + VA+K++ +RE+ +L H+ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRS--KQALTDDHCQYFLYQLLRGLKYIHS 156
+ D+ ++ + +V+E +D DL + + + + + ++QLLRGL ++HS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW-------------- 202
V+HRDLKP N+L+ ++ +K+ DFGLAR S +T VVT W
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 203 -----------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQL 245
LF G V QL I +++G P + D + R R +
Sbjct: 199 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED--WPRDVALPR--QAF 254
Query: 246 PHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
QP + ++ + DL + L F+PAKRI+ AL+HPY L E
Sbjct: 255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKE 308
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 134/294 (45%), Gaps = 41/294 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEE-VAIKKITNAFDNRIDAKRILREIKLLCHMT---HENIVK 98
IG GAYG V A + + VA+K++ +RE+ +L H+ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRS--KQALTDDHCQYFLYQLLRGLKYIHS 156
+ D+ ++ + +V+E +D DL + + + + + ++QLLRGL ++HS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW-------------- 202
V+HRDLKP N+L+ ++ +K+ DFGLAR S +T VVT W
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 203 -----------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQL 245
LF G V QL I +++G P + D + R R +
Sbjct: 199 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED--WPRDVALPR--QAF 254
Query: 246 PHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
QP + ++ + DL + L F+PAKRI+ AL+HPY L E
Sbjct: 255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKE 308
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 43 IGRGAYGIVCSAVNSETKEE-VAIKKITNAFDNRIDAKRILREIKLLCHMT---HENIVK 98
IG GAYG V A + + VA+K++ +RE+ +L H+ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRS--KQALTDDHCQYFLYQLLRGLKYIHS 156
+ D+ ++ + +V+E +D DL + + + + + ++QLLRGL ++HS
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW-------------- 202
V+HRDLKP N+L+ ++ +K+ DFGLAR S +T VVT W
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYAT 198
Query: 203 -----------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQL 245
LF G V QL I +++G P + D + R R +
Sbjct: 199 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED--WPRDVALPR--QAF 254
Query: 246 PHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
QP + ++ + DL + L F+PAKRI+ AL+HPY
Sbjct: 255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 134/276 (48%), Gaps = 32/276 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G++G V + T++E A+K I A D ILRE++LL + H NI+K+ +I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 103 IPPMDKEKFNDVYIVYEL-MDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLH 161
+ E + YIV EL +L I ++ ++ + Q+ G+ Y+H N++H
Sbjct: 90 L-----EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 162 RDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRW----DTLFPGKD---- 210
RDLKP N+LL + +CD+KI DFGL+ + M + + T + + L D
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCD 204
Query: 211 -YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
+ + + L G+P ++ L+ +Y LP ++ +S A D
Sbjct: 205 VWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP---------QWRTISDDAKD 255
Query: 267 LAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
L +ML F P+ RIT + L HP++ +E PT
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQKYS--SETPT 289
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 30/265 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G++G V + T++E A+K I A D ILRE++LL + H NI+K+ +I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 103 IPPMDKEKFNDVYIVYEL-MDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLH 161
+ E + YIV EL +L I ++ ++ + Q+ G+ Y+H N++H
Sbjct: 90 L-----EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 162 RDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRW----DTLFPGKD---- 210
RDLKP N+LL + +CD+KI DFGL+ + M + + T + + L D
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCD 204
Query: 211 -YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
+ + + L G+P ++ L+ +Y LP ++ +S A D
Sbjct: 205 VWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP---------QWRTISDDAKD 255
Query: 267 LAERMLVFDPAKRITVEEALNHPYL 291
L +ML F P+ RIT + L HP++
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 30/265 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G++G V + T++E A+K I A D ILRE++LL + H NI+K+ +I
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 103 IPPMDKEKFNDVYIVYEL-MDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLH 161
+ E + YIV EL +L I ++ ++ + Q+ G+ Y+H N++H
Sbjct: 90 L-----EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 162 RDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRW----DTLFPGKD---- 210
RDLKP N+LL + +CD+KI DFGL+ + M + + T + + L D
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCD 204
Query: 211 -YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
+ + + L G+P ++ L+ +Y LP ++ +S A D
Sbjct: 205 VWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP---------QWRTISDDAKD 255
Query: 267 LAERMLVFDPAKRITVEEALNHPYL 291
L +ML F P+ RIT + L HP++
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 126/296 (42%), Gaps = 41/296 (13%)
Query: 32 VSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHM 91
+S+Y P+ IG GAYG V A + + VA+K + +RE+ LL +
Sbjct: 2 ATSRY-EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 92 T---HENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQII--RSKQALTDDHCQYFLYQ 146
H N+V++ D+ ++ V +V+E +D DL + L + + + Q
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S + VVT W
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAP 180
Query: 203 ---------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRS 235
LF G QL I +L+G P + D + R
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD--WPRD 238
Query: 236 DNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ R P +P P M L ML F+P KRI+ AL H YL
Sbjct: 239 VSLPR--GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 137/281 (48%), Gaps = 40/281 (14%)
Query: 32 VSSKYVPPL---QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKL 87
+S +++ P + +G G++G V A + +T+++VA+K I+ + D R+ REI
Sbjct: 3 ISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISY 62
Query: 88 LCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQL 147
L + H +I+K+ D+I D+ +V E +L I K+ +T+D + F Q+
Sbjct: 63 LKLLRHPHIIKLYDVITTP-----TDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQI 117
Query: 148 LRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP 207
+ ++Y H ++HRDLKP NLLL+ N ++KI DFGL+ ++ +F+ T
Sbjct: 118 ICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK--------TSCG 169
Query: 208 GKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKF-PN------- 259
+Y + +L P+ + S YV V + PF +F PN
Sbjct: 170 SPNYAAPEVINGKLYAGPEVD----VWSCGIVLYVML---VGRLPFDDEFIPNLFKKVNS 222
Query: 260 --------MSPVAIDLAERMLVFDPAKRITVEEALNHPYLS 292
+SP A L RM+V DP +RIT++E P+ +
Sbjct: 223 CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFN 263
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 130/304 (42%), Gaps = 43/304 (14%)
Query: 27 GNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIK--KITNAFDNRIDAK-RILR 83
G L +++ P+ IG GAYG V A + + VA+K ++ N +R
Sbjct: 1 GPLGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR 60
Query: 84 EIKLLCHMT---HENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQII--RSKQALTDD 138
E+ LL + H N+V++ D+ ++ V +V+E +D DL + L +
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYV 198
+ + Q LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S +T V
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV 180
Query: 199 VTRW-------------------------------DTLFPGKDYVQQLTMITELLGSPDD 227
VT W LF G QL I +L+G P +
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240
Query: 228 SDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALN 287
D + R + R P +P P M L ML F+P KRI+ AL
Sbjct: 241 DD--WPRDVSLPR--GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296
Query: 288 HPYL 291
H YL
Sbjct: 297 HSYL 300
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 126/296 (42%), Gaps = 41/296 (13%)
Query: 32 VSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHM 91
+S+Y P+ IG GAYG V A + + VA+K + +RE+ LL +
Sbjct: 2 ATSRY-EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 92 T---HENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQII--RSKQALTDDHCQYFLYQ 146
H N+V++ D+ ++ V +V+E +D DL + L + + + Q
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S + VVT W
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAP 180
Query: 203 ---------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRS 235
LF G QL I +L+G P + D + R
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD--WPRD 238
Query: 236 DNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ R P +P P M L ML F+P KRI+ AL H YL
Sbjct: 239 VSLPR--GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 126/296 (42%), Gaps = 41/296 (13%)
Query: 32 VSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHM 91
+S+Y P+ IG GAYG V A + + VA+K + +RE+ LL +
Sbjct: 2 ATSRY-EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 92 T---HENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQ--ALTDDHCQYFLYQ 146
H N+V++ D+ ++ V +V+E +D DL + L + + + Q
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRW---- 202
LRGL ++H+ ++HRDLKP N+L+ + +K+ DFGLAR S + VVT W
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAP 180
Query: 203 ---------------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRS 235
LF G QL I +L+G P + D + R
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD--WPRD 238
Query: 236 DNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ R P +P P M L ML F+P KRI+ AL H YL
Sbjct: 239 VSLPR--GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 143/305 (46%), Gaps = 49/305 (16%)
Query: 34 SKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTH 93
SKY L IG+G +G V A + +T ++VA+KK+ + LREIK+L + H
Sbjct: 17 SKY-EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 94 ENIVKVKDII----PPMDKEKFNDVYIVYELMDTDLHQIIRSKQA-LTDDHCQYFLYQLL 148
EN+V + +I P ++ K +Y+V++ + DL ++ + T + + LL
Sbjct: 76 ENVVNLIEICRTKASPYNRCK-GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART-----TSETDFMTEYVVTRW- 202
GL YIH +LHRD+K +N+L+ + LK+ DFGLAR S+ + VVT W
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 203 ---DTLFPGKDY----------------------------VQQLTMITELLGSPDDSDLG 231
+ L +DY QL +I++L GS
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE--V 252
Query: 232 FLRSDNARRYVK-QLPHVPKQPFSQKFPNM--SPVAIDLAERMLVFDPAKRITVEEALNH 288
+ DN Y K +L K+ + P A+DL +++LV DPA+RI ++ALNH
Sbjct: 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312
Query: 289 PYLSS 293
+ S
Sbjct: 313 DFFWS 317
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 143/305 (46%), Gaps = 49/305 (16%)
Query: 34 SKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTH 93
SKY L IG+G +G V A + +T ++VA+KK+ + LREIK+L + H
Sbjct: 18 SKY-EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 94 ENIVKVKDII----PPMDKEKFNDVYIVYELMDTDLHQIIRSKQA-LTDDHCQYFLYQLL 148
EN+V + +I P ++ K +Y+V++ + DL ++ + T + + LL
Sbjct: 77 ENVVNLIEICRTKASPYNRCK-GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART-----TSETDFMTEYVVTRW- 202
GL YIH +LHRD+K +N+L+ + LK+ DFGLAR S+ + VVT W
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 203 ---DTLFPGKDYV----------------------------QQLTMITELLGSPDDSDLG 231
+ L +DY QL +I++L GS
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE--V 253
Query: 232 FLRSDNARRYVK-QLPHVPKQPFSQKFPNM--SPVAIDLAERMLVFDPAKRITVEEALNH 288
+ DN Y K +L K+ + P A+DL +++LV DPA+RI ++ALNH
Sbjct: 254 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 289 PYLSS 293
+ S
Sbjct: 314 DFFWS 318
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 143/305 (46%), Gaps = 49/305 (16%)
Query: 34 SKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTH 93
SKY L IG+G +G V A + +T ++VA+KK+ + LREIK+L + H
Sbjct: 18 SKY-EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 94 ENIVKVKDI----IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQA-LTDDHCQYFLYQLL 148
EN+V + +I P ++ K +Y+V++ + DL ++ + T + + LL
Sbjct: 77 ENVVNLIEICRTKASPYNRCK-GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART-----TSETDFMTEYVVTRW- 202
GL YIH +LHRD+K +N+L+ + LK+ DFGLAR S+ + VVT W
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 203 ---DTLFPGKDY----------------------------VQQLTMITELLGSPDDSDLG 231
+ L +DY QL +I++L GS
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE--V 253
Query: 232 FLRSDNARRYVK-QLPHVPKQPFSQKFPN--MSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ DN Y K +L K+ + P A+DL +++LV DPA+RI ++ALNH
Sbjct: 254 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 289 PYLSS 293
+ S
Sbjct: 314 DFFWS 318
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 144/305 (47%), Gaps = 49/305 (16%)
Query: 34 SKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTH 93
SKY L IG+G +G V A + +T ++VA+KK+ + LREIK+L + H
Sbjct: 18 SKY-EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 94 ENIVKVKDII----PPMDKEKFNDVYIVYELMDTDLHQIIRSKQA-LTDDHCQYFLYQLL 148
EN+V + +I P ++ K + +Y+V++ + DL ++ + T + + LL
Sbjct: 77 ENVVNLIEICRTKASPYNRCKAS-IYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART-----TSETDFMTEYVVTRW- 202
GL YIH +LHRD+K +N+L+ + LK+ DFGLAR S+ + VVT W
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 203 ---DTLFPGKDYV----------------------------QQLTMITELLGSPDDSDLG 231
+ L +DY QL +I++L GS
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE--V 253
Query: 232 FLRSDNARRYVK-QLPHVPKQPFSQKFPNM--SPVAIDLAERMLVFDPAKRITVEEALNH 288
+ DN Y K +L K+ + P A+DL +++LV DPA+RI ++ALNH
Sbjct: 254 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 289 PYLSS 293
+ S
Sbjct: 314 DFFWS 318
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 168/393 (42%), Gaps = 99/393 (25%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+ SSK + +G G++GIVC + E+ + A+KK+ D + RE+ ++
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQ------DPRYKNRELDIMK 55
Query: 90 HMTHENIVKVKDII------------PPMDKEKFND---------------------VYI 116
+ H NI+K+ D PP D K + +
Sbjct: 56 VLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNV 115
Query: 117 VYELMDTDLHQI----IRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN 172
+ E + LH++ IRS +++ + ++YQL R + +IHS + HRD+KP NLL+N
Sbjct: 116 IMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN 175
Query: 173 A-NCDLKICDFGLARTTSETDFMTEYVVTR--------------------WDT------- 204
+ + LK+CDFG A+ ++ + +R W
Sbjct: 176 SKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235
Query: 205 -----LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN 259
LF G+ + QL I +++G+P + +R + V+ P + + + + P
Sbjct: 236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQM--IRMNPHYTEVR-FPTLKAKDWRKILPE 292
Query: 260 MSP-VAIDLAERMLVFDPAKRITVEEALNHPYLSSL---------------HEINEEPTC 303
+P +AIDL E++L ++P RI EA+ HP+ L H +N+
Sbjct: 293 GTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQ--NI 350
Query: 304 PYPFNFDFEQTSMNEEDIKELILRECLNFHPDH 336
P FNF + S+ ++ IL + NF P++
Sbjct: 351 PQLFNFSPYELSIIPGNVLNRILPK--NFSPNY 381
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 44/279 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITN---AFDNRIDAKRILR---EIKLLCHMTHE 94
+ +G GA G V A +T ++VAIK I+ A + +A L EI++L + H
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
I+K+K+ D E D YIV ELM+ +L + + L + C+ + YQ+L ++Y
Sbjct: 75 CIIKIKNF---FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 154 IHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKD 210
+H ++HRDLKP N+LL++ +C +KI DFG ++ ET M TL
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR--------TLCGTPT 180
Query: 211 YVQQLTMITELLGSP------DDSDLGFLRSDNARRYVKQLPH-----VPKQPFSQKF-- 257
Y+ +++ +G+ D LG + Y H + Q S K+
Sbjct: 181 YLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 238
Query: 258 -----PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+S A+DL +++LV DP R T EEAL HP+L
Sbjct: 239 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 277
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 44/279 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITN---AFDNRIDAKRILR---EIKLLCHMTHE 94
+ +G GA G V A +T ++VAIK I+ A + +A L EI++L + H
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
I+K+K+ D E D YIV ELM+ +L + + L + C+ + YQ+L ++Y
Sbjct: 82 CIIKIKNF---FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 154 IHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKD 210
+H ++HRDLKP N+LL++ +C +KI DFG ++ ET M TL
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR--------TLCGTPT 187
Query: 211 YVQQLTMITELLGSP------DDSDLGFLRSDNARRYVKQLPH-----VPKQPFSQKF-- 257
Y+ +++ +G+ D LG + Y H + Q S K+
Sbjct: 188 YLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 245
Query: 258 -----PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+S A+DL +++LV DP R T EEAL HP+L
Sbjct: 246 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 284
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 44/279 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITN---AFDNRIDAKRILR---EIKLLCHMTHE 94
+ +G GA G V A +T ++VAIK I+ A + +A L EI++L + H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
I+K+K+ D E D YIV ELM+ +L + + L + C+ + YQ+L ++Y
Sbjct: 76 CIIKIKNF---FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 154 IHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKD 210
+H ++HRDLKP N+LL++ +C +KI DFG ++ ET M TL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR--------TLCGTPT 181
Query: 211 YVQQLTMITELLGSP------DDSDLGFLR---------SDNARRYVKQLPHVPKQPFS- 254
Y+ +++ +G+ D LG + R V + ++
Sbjct: 182 YLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239
Query: 255 --QKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ + +S A+DL +++LV DP R T EEAL HP+L
Sbjct: 240 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 44/279 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITN---AFDNRIDAKRILR---EIKLLCHMTHE 94
+ +G GA G V A +T ++VAIK I+ A + +A L EI++L + H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
I+K+K+ D E D YIV ELM+ +L + + L + C+ + YQ+L ++Y
Sbjct: 76 CIIKIKNF---FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 154 IHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKD 210
+H ++HRDLKP N+LL++ +C +KI DFG ++ ET M TL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR--------TLCGTPT 181
Query: 211 YVQQLTMITELLGSP------DDSDLGFLR---------SDNARRYVKQLPHVPKQPFS- 254
Y+ +++ +G+ D LG + R V + ++
Sbjct: 182 YLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239
Query: 255 --QKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ + +S A+DL +++LV DP R T EEAL HP+L
Sbjct: 240 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 44/279 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITN---AFDNRIDAKRILR---EIKLLCHMTHE 94
+ +G GA G V A +T ++VAIK I+ A + +A L EI++L + H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
I+K+K+ D E D YIV ELM+ +L + + L + C+ + YQ+L ++Y
Sbjct: 76 CIIKIKNF---FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 154 IHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKD 210
+H ++HRDLKP N+LL++ +C +KI DFG ++ ET M TL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR--------TLCGTPT 181
Query: 211 YVQQLTMITELLGSP------DDSDLGFLRSDNARRYVKQLPH-----VPKQPFSQKF-- 257
Y+ +++ +G+ D LG + Y H + Q S K+
Sbjct: 182 YLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239
Query: 258 -----PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+S A+DL +++LV DP R T EEAL HP+L
Sbjct: 240 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 135/279 (48%), Gaps = 44/279 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITN---AFDNRIDAKRILR---EIKLLCHMTHE 94
+ +G GA G V A +T ++VAI+ I+ A + +A L EI++L + H
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
I+K+K+ D E D YIV ELM+ +L + + L + C+ + YQ+L ++Y
Sbjct: 215 CIIKIKNF---FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 154 IHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKD 210
+H ++HRDLKP N+LL++ +C +KI DFG ++ ET M TL
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR--------TLCGTPT 320
Query: 211 YVQQLTMITELLGSP------DDSDLGFLRSDNARRYVKQLPH-----VPKQPFSQKF-- 257
Y+ +++ +G+ D LG + Y H + Q S K+
Sbjct: 321 YLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 378
Query: 258 -----PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+S A+DL +++LV DP R T EEAL HP+L
Sbjct: 379 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 417
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 44/279 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITN---AFDNRIDAKRILR---EIKLLCHMTHE 94
+ +G GA G V A +T ++VAI+ I+ A + +A L EI++L + H
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
I+K+K+ D E D YIV ELM+ +L + + L + C+ + YQ+L ++Y
Sbjct: 201 CIIKIKNF---FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 154 IHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKD 210
+H ++HRDLKP N+LL++ +C +KI DFG ++ ET M TL
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR--------TLCGTPT 306
Query: 211 YVQQLTMITELLGSP------DDSDLG------------FLRSDNARRYVKQLPHVPKQP 252
Y+ +++ +G+ D LG F Q+
Sbjct: 307 YLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 364
Query: 253 FSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ + +S A+DL +++LV DP R T EEAL HP+L
Sbjct: 365 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 403
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 63/302 (20%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE-NIVK 98
++ +GRG Y V A+N E+V +K + N+I REIK+L ++ NI+
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK-----REIKILENLRGGPNIIT 96
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y HS
Sbjct: 97 LADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 159 VLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF-MTEY 197
++HRD+KP N++++ + L++ D+GLA R S D+ M +Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 198 VVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DSDLGF 232
+ W + F G D QL I ++LG+ D D
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 233 LRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLS 292
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ HPY
Sbjct: 272 ILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 293 SL 294
++
Sbjct: 326 TV 327
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 34/272 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + +V T + A K I T + + + I RE+ +L + H N+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G+ Y+H
Sbjct: 77 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
S + H DLKP N +LL+ N +KI DFGLA + DF E+ +F ++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIFGTPEF 183
Query: 212 VQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPN 259
V + E LG D +G + D + + + V + + F N
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
S +A D R+LV DP KR+T++++L HP++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 34/277 (12%)
Query: 36 YVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHM 91
Y + +G G + +V T + A K I T + + + I RE+ +L +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRG 150
H N++ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G
Sbjct: 72 QHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 151 LKYIHSANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLF 206
+ Y+HS + H DLKP N +LL+ N +KI DFGLA + DF E+ +F
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIF 178
Query: 207 PGKDYVQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFS 254
++V + E LG D +G + D + + + V +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 255 QKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ F N S +A D R+LV DP KR+T++++L HP++
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 34/272 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + +V T + A K I T + + + I RE+ +L + H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G+ Y+H
Sbjct: 76 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
S + H DLKP N +LL+ N +KI DFGLA + DF E+ +F ++
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIFGTPEF 182
Query: 212 VQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPN 259
V + E LG D +G + D + + + V + + F N
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
S +A D R+LV DP KR+T++++L HP++
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 34/272 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + +V T + A K I T + + + I RE+ +L + H N+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G+ Y+H
Sbjct: 77 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
S + H DLKP N +LL+ N +KI DFGLA + DF E+ +F ++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIFGTPEF 183
Query: 212 VQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPN 259
V + E LG D +G + D + + + V + + F N
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
S +A D R+LV DP KR+T++++L HP++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 34/272 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + +V T + A K I T + + + I RE+ +L + H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G+ Y+H
Sbjct: 76 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
S + H DLKP N +LL+ N +KI DFGLA + DF E+ +F ++
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIFGTPEF 182
Query: 212 VQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPN 259
V + E LG D +G + D + + + V + + F N
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
S +A D R+LV DP KR+T++++L HP++
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 34/272 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + +V T + A K I T + + + I RE+ +L + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G+ Y+H
Sbjct: 77 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
S + H DLKP N +LL+ N +KI DFGLA + DF E+ +F ++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIFGTPEF 183
Query: 212 VQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPN 259
V + E LG D +G + D + + + V + + F N
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
S +A D R+LV DP KR+T++++L HP++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 34/277 (12%)
Query: 36 YVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHM 91
Y + +G G + +V T + A K I T + + + I RE+ +L +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRG 150
H N++ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G
Sbjct: 72 QHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 151 LKYIHSANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLF 206
+ Y+HS + H DLKP N +LL+ N +KI DFGLA + DF E+ +F
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIF 178
Query: 207 PGKDYVQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFS 254
++V + E LG D +G + D + + + V +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 255 QKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ F N S +A D R+LV DP KR+T++++L HP++
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 34/272 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + +V T + A K I T + + + I RE+ +L + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G+ Y+H
Sbjct: 77 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
S + H DLKP N +LL+ N +KI DFGLA + DF E+ +F ++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIFGTPEF 183
Query: 212 VQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPN 259
V + E LG D +G + D + + + V + + F N
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
S +A D R+LV DP KR+T++++L HP++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 32/276 (11%)
Query: 36 YVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHM 91
Y + +G G + +V T + A K I T + + + I RE+ +L +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRG 150
H N++ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G
Sbjct: 72 QHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 151 LKYIHSANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLF 206
+ Y+HS + H DLKP N +LL+ N +KI DFGLA + DF E+ F
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPAF 183
Query: 207 PGKDYVQ-----------QLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQ 255
+ V + +IT +L S LG D + + + V + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG----DTKQETLANVSAVNYEFEDE 239
Query: 256 KFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
F N S +A D R+LV DP KR+T++++L HP++
Sbjct: 240 YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 34/277 (12%)
Query: 36 YVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHM 91
Y + +G G + +V T + A K I T + + + I RE+ +L +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRG 150
H N++ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G
Sbjct: 72 QHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 151 LKYIHSANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLF 206
+ Y+HS + H DLKP N +LL+ N +KI DFGLA + DF E+ +F
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIF 178
Query: 207 PGKDYVQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFS 254
++V + E LG D +G + D + + + V +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 255 QKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ F N S +A D R+LV DP KR+T++++L HP++
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 34/272 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + +V T + A K I T + + + I RE+ +L + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G+ Y+H
Sbjct: 77 ITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
S + H DLKP N +LL+ N +KI DFGLA + DF E+ +F ++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIFGTPEF 183
Query: 212 VQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPN 259
V + E LG D +G + D + + + V + + F N
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
S +A D R+LV DP KR+T++++L HP++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 141/290 (48%), Gaps = 32/290 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+ +G+GA+ +V V +E A K I + D +++ RE ++ + H NIV++
Sbjct: 36 FEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 95
Query: 100 KDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D I +E F+ Y+V++L+ +L + I +++ ++ + ++Q+L + +IH +
Sbjct: 96 HDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 159 VLHRDLKPSNLLLNANCD---LKICDFGLA-----------RTTSETDFMTEYVVTRWDT 204
++HRDLKP NLLL + C +K+ DFGLA +++ V+ +
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 205 LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVA 264
P + + + L+G P F D + Y +Q+ S ++ ++P A
Sbjct: 211 GKPVDIWACGVILYILLVGYPP-----FWDEDQHKLY-QQIKAGAYDFPSPEWDTVTPEA 264
Query: 265 IDLAERMLVFDPAKRITVEEALNHPY------LSSLHEINEEPTCPYPFN 308
+L +ML +PAKRIT ++AL HP+ ++S+ E C FN
Sbjct: 265 KNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFN 314
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 34/277 (12%)
Query: 36 YVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHM 91
Y + +G G + +V T + A K I T + + + I RE+ +L +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRG 150
H N++ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G
Sbjct: 72 QHPNVITLHEVY-----ENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 151 LKYIHSANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLF 206
+ Y+HS + H DLKP N +LL+ N +KI DFGLA + DF E+ +F
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIF 178
Query: 207 PGKDYVQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFS 254
++V + E LG D +G + D + + + V +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 255 QKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ F N S +A D R+LV DP KR+T++++L HP++
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 34/277 (12%)
Query: 36 YVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHM 91
Y + +G G + +V T + A K I T + + + I RE+ +L +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRG 150
H N++ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G
Sbjct: 72 QHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 151 LKYIHSANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLF 206
+ Y+HS + H DLKP N +LL+ N +KI DFGLA + DF E+ +F
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIF 178
Query: 207 PGKDYVQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFS 254
++V + E LG D +G + D + + + V +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 255 QKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ F N S +A D R+LV DP KR+T++++L HP++
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 34/277 (12%)
Query: 36 YVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHM 91
Y + +G G + +V T + A K I T + + + I RE+ +L +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRG 150
H N++ + ++ E DV ++ EL+ +L + K++LT++ FL Q+L G
Sbjct: 72 QHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 151 LKYIHSANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSETDFMTEYVVTRWDTLF 206
+ Y+HS + H DLKP N +LL+ N +KI DFGLA + DF E+ +F
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEF-----KNIF 178
Query: 207 PGKDYVQQLTMITELLG-SPDDSDLGFLR-----------SDNARRYVKQLPHVPKQPFS 254
++V + E LG D +G + D + + + V +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 255 QKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ F N S +A D R+LV DP KR+T++++L HP++
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 136/287 (47%), Gaps = 32/287 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG+GA+ +V V T E A K I + D +++ RE ++ + H NIV++ D
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 103 IPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLH 161
I +E F+ Y+V++L+ +L + I +++ ++ + + Q+L + + H V+H
Sbjct: 72 I---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVH 126
Query: 162 RDLKPSNLLLNANCD---LKICDFGLA-----------RTTSETDFMTEYVVTRWDTLFP 207
RDLKP NLLL + C +K+ DFGLA +++ V+ + P
Sbjct: 127 RDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKP 186
Query: 208 GKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
+ + + L+G P F D + Y +Q+ S ++ ++P A +L
Sbjct: 187 VDIWACGVILYILLVGYPP-----FWDEDQHKLY-QQIKAGAYDFPSPEWDTVTPEAKNL 240
Query: 268 AERMLVFDPAKRITVEEALNHPY------LSSLHEINEEPTCPYPFN 308
+ML +PAKRIT EAL HP+ ++S+ E C FN
Sbjct: 241 INQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFN 287
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 28/276 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT----NAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + IV T +E A K I ++ + + I RE+ +L + H NI
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + DI E DV ++ EL+ +L + K++LT+D FL Q+L G+ Y+H
Sbjct: 71 ITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 125
Query: 156 SANVLHRDLKPSNLLL----NANCDLKICDFGLARTTSETD-----FMT-EYV---VTRW 202
S + H DLKP N++L N +K+ DFG+A + F T E+V + +
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 185
Query: 203 DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ L D + + +IT +L S LG + + + + V + F N S
Sbjct: 186 EPLGLEAD-MWSIGVITYILLSGASPFLG----ETKQETLTNISAVNYDFDEEYFSNTSE 240
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEIN 298
+A D R+LV DP +R+T+ ++L H ++ ++ N
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 136/272 (50%), Gaps = 36/272 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNA-FDNR--IDAKRILREIKLLCHM-THENIVK 98
IG+GA+ +V +N ET ++ A+K + A F + + + + RE + CHM H +IV+
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI-CHMLKHPHIVE 90
Query: 99 VKDIIPPMDKEKFNDVYIVYELMD-TDL-HQIIRSKQA---LTDDHCQYFLYQLLRGLKY 153
+ + +Y+V+E MD DL +I++ A ++ +++ Q+L L+Y
Sbjct: 91 LLETY-----SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 154 IHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETD-----------FMTEYVV 199
H N++HRD+KP N+LL + + +K+ DFG+A E+ FM VV
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 200 TRWDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN 259
R P + + + L G L F + R + + + +++ +
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGC-----LPFYGTKE--RLFEGIIKGKYKMNPRQWSH 258
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+S A DL RML+ DPA+RITV EALNHP+L
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 31/266 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVK 98
++ +G G++G V A ++ T ++VA+K I + D + RI REI L + H +I+K
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ D+I D ++ +V E +L I + +++ + F Q++ ++Y H
Sbjct: 79 LYDVIKSKD-----EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 133
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTMI 218
++HRDLKP NLLL+ + ++KI DFGL+ ++ +F+ T +Y +
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK--------TSCGSPNYAAPEVIS 185
Query: 219 TELLGSPDDSDLGFLRSDNARRYVKQLPHVP--KQPFSQKFPN-----------MSPVAI 265
+L P+ + S YV +P + F N +SP A
Sbjct: 186 GKLYAGPEVD----VWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAA 241
Query: 266 DLAERMLVFDPAKRITVEEALNHPYL 291
L +RML+ +P RI++ E + +
Sbjct: 242 GLIKRMLIVNPLNRISIHEIMQDDWF 267
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 31/266 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVK 98
++ +G G++G V A ++ T ++VA+K I + D + RI REI L + H +I+K
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ D+I D ++ +V E +L I + +++ + F Q++ ++Y H
Sbjct: 78 LYDVIKSKD-----EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 132
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTMI 218
++HRDLKP NLLL+ + ++KI DFGL+ ++ +F+ T +Y +
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK--------TSCGSPNYAAPEVIS 184
Query: 219 TELLGSPDDSDLGFLRSDNARRYVKQLPHVP--KQPFSQKFPN-----------MSPVAI 265
+L P+ + S YV +P + F N +SP A
Sbjct: 185 GKLYAGPEVD----VWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAA 240
Query: 266 DLAERMLVFDPAKRITVEEALNHPYL 291
L +RML+ +P RI++ E + +
Sbjct: 241 GLIKRMLIVNPLNRISIHEIMQDDWF 266
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 136/315 (43%), Gaps = 55/315 (17%)
Query: 44 GRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDII 103
G+G +G V T VAIKK+ R +I++++ +L H NIV+++
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL---HHPNIVQLQSYF 88
Query: 104 PPMDKEKFNDVY--IVYELMDTDLHQIIRS----KQALTDDHCQYFLYQLLRGLKYIH-- 155
+ + D+Y +V E + LH+ R+ + A + FL+QL+R + +H
Sbjct: 89 YTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP 148
Query: 156 SANVLHRDLKPSNLLLN-ANCDLKICDFGLARTTSETDFMTEYVVTRW------------ 202
S NV HRD+KP N+L+N A+ LK+CDFG A+ S ++ Y+ +R+
Sbjct: 149 SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQH 208
Query: 203 --------------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYV 242
+ +F G + QL I +LG P LR N
Sbjct: 209 YTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE---VLRKLNPSHTD 265
Query: 243 KQLPHVPKQPFSQKFPNMS----PVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEIN 298
L + P+S F + S A DL +L + P +R+ EAL HPY LH
Sbjct: 266 VDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH--- 322
Query: 299 EEPTCPYPFNFDFEQ 313
+P P N D +
Sbjct: 323 -DPATKLPNNKDLPE 336
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 31/266 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVK 98
++ +G G++G V A ++ T ++VA+K I + D + RI REI L + H +I+K
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ D+I D ++ +V E +L I + +++ + F Q++ ++Y H
Sbjct: 69 LYDVIKSKD-----EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTMI 218
++HRDLKP NLLL+ + ++KI DFGL+ ++ +F+ T +Y +
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK--------TSCGSPNYAAPEVIS 175
Query: 219 TELLGSPDDSDLGFLRSDNARRYVKQLPHVP--KQPFSQKFPN-----------MSPVAI 265
+L P+ + S YV +P + F N +SP A
Sbjct: 176 GKLYAGPEVD----VWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAA 231
Query: 266 DLAERMLVFDPAKRITVEEALNHPYL 291
L +RML+ +P RI++ E + +
Sbjct: 232 GLIKRMLIVNPLNRISIHEIMQDDWF 257
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 31/266 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVK 98
++ +G G++G V A ++ T ++VA+K I + D + RI REI L + H +I+K
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ D+I D ++ +V E +L I + +++ + F Q++ ++Y H
Sbjct: 73 LYDVIKSKD-----EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 127
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTMI 218
++HRDLKP NLLL+ + ++KI DFGL+ ++ +F+ T +Y +
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK--------TSCGSPNYAAPEVIS 179
Query: 219 TELLGSPDDSDLGFLRSDNARRYVKQLPHVP--KQPFSQKFPN-----------MSPVAI 265
+L P+ + S YV +P + F N +SP A
Sbjct: 180 GKLYAGPEVD----VWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAA 235
Query: 266 DLAERMLVFDPAKRITVEEALNHPYL 291
L +RML+ +P RI++ E + +
Sbjct: 236 GLIKRMLIVNPLNRISIHEIMQDDWF 261
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 35/270 (12%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G+G++G V + T +E A+K I+ + D + +LRE++LL + H NI+K+ +
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 102 IIPPMDKEKF---NDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
DK F +VY EL D I S++ ++ + Q+L G+ Y+H
Sbjct: 100 FFE--DKGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 159 VLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRW----DTLFPGKD- 210
++HRDLKP NLLL + + +++I DFGL+ + M + + T + + L D
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 212
Query: 211 ----YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPV 263
+ + + L G P ++ L+ +Y +LP K +S
Sbjct: 213 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK---------VSES 263
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL +ML + P+ RI+ +AL+H ++ +
Sbjct: 264 AKDLIRKMLTYVPSMRISARDALDHEWIQT 293
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 28/276 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITN----AFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + IV T +E A K I + + + I RE+ +L + H NI
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + DI E DV ++ EL+ +L + K++LT+D FL Q+L G+ Y+H
Sbjct: 92 ITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 146
Query: 156 SANVLHRDLKPSNLLL----NANCDLKICDFGLARTTSETD-----FMT-EYV---VTRW 202
S + H DLKP N++L N +K+ DFG+A + F T E+V + +
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 206
Query: 203 DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ L D + + +IT +L S LG + + + + V + F N S
Sbjct: 207 EPLGLEAD-MWSIGVITYILLSGASPFLG----ETKQETLTNISAVNYDFDEEYFSNTSE 261
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEIN 298
+A D R+LV DP +R+ + ++L H ++ ++ N
Sbjct: 262 LAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRRRN 297
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 137/290 (47%), Gaps = 32/290 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+ +G+GA+ +V + T +E A K I + D +++ RE ++ + H NIV++
Sbjct: 9 FEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 100 KDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D I +E F+ Y+V++L+ +L + I +++ ++ + + Q+L + + H
Sbjct: 69 HDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 159 VLHRDLKPSNLLLNA---NCDLKICDFGLA-----------RTTSETDFMTEYVVTRWDT 204
++HRDLKP NLLL + +K+ DFGLA +++ V+ +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 205 LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVA 264
P + + + L+G P F D R Y +Q+ S ++ ++P A
Sbjct: 184 GKPVDMWACGVILYILLVGYPP-----FWDEDQHRLY-QQIKAGAYDFPSPEWDTVTPEA 237
Query: 265 IDLAERMLVFDPAKRITVEEALNHPYL------SSLHEINEEPTCPYPFN 308
DL +ML +PAKRIT EAL HP++ +S+ E C FN
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFN 287
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 35/270 (12%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G+G++G V + T +E A+K I+ + D + +LRE++LL + H NI+K+ +
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 102 IIPPMDKEKF---NDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
DK F +VY EL D I S++ ++ + Q+L G+ Y+H
Sbjct: 117 FFE--DKGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 159 VLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRW----DTLFPGKD- 210
++HRDLKP NLLL + + +++I DFGL+ + M + + T + + L D
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 229
Query: 211 ----YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPV 263
+ + + L G P ++ L+ +Y +LP K +S
Sbjct: 230 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK---------VSES 280
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL +ML + P+ RI+ +AL+H ++ +
Sbjct: 281 AKDLIRKMLTYVPSMRISARDALDHEWIQT 310
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 35/270 (12%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G+G++G V + T +E A+K I+ + D + +LRE++LL + H NI+K+ +
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 102 IIPPMDKEKF---NDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
DK F +VY EL D I S++ ++ + Q+L G+ Y+H
Sbjct: 94 FFE--DKGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 159 VLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRW----DTLFPGKD- 210
++HRDLKP NLLL + + +++I DFGL+ + M + + T + + L D
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 206
Query: 211 ----YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPV 263
+ + + L G P ++ L+ +Y +LP K +S
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK---------VSES 257
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL +ML + P+ RI+ +AL+H ++ +
Sbjct: 258 AKDLIRKMLTYVPSMRISARDALDHEWIQT 287
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 35/270 (12%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G+G++G V + T +E A+K I+ + D + +LRE++LL + H NI+K+ +
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 102 IIPPMDKEKF---NDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
DK F +VY EL D I S++ ++ + Q+L G+ Y+H
Sbjct: 118 FFE--DKGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 159 VLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRW----DTLFPGKD- 210
++HRDLKP NLLL + + +++I DFGL+ + M + + T + + L D
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE 230
Query: 211 ----YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPV 263
+ + + L G P ++ L+ +Y +LP K +S
Sbjct: 231 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK---------VSES 281
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL +ML + P+ RI+ +AL+H ++ +
Sbjct: 282 AKDLIRKMLTYVPSMRISARDALDHEWIQT 311
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 34/279 (12%)
Query: 34 SKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTH 93
S+ ++ +G GAYG V + T E AIK I + ++L E+ +L + H
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 94 ENIVKVKDIIPPMDKEKFNDVYIVY---ELMDTDLHQIIRSKQALTDDHCQYFLYQLLRG 150
NI+K+ D DK + V Y EL D +H++ + + Q+L G
Sbjct: 96 PNIMKLYDFFE--DKRNYYLVMECYKGGELFDEIIHRM-----KFNEVDAAVIIKQVLSG 148
Query: 151 LKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRW----D 203
+ Y+H N++HRDLKP NLLL + + +KI DFGL+ M E + T + +
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPE 208
Query: 204 TLFPGKD-----YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVPKQPFSQ 255
L D + + + L G P +D LR +Y P
Sbjct: 209 VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSP--------- 259
Query: 256 KFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
++ N+S A DL ++ML FD +RI+ ++AL HP++ +
Sbjct: 260 EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 137/290 (47%), Gaps = 32/290 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+ +G+GA+ +V + T +E A K I + D +++ RE ++ + H NIV++
Sbjct: 9 FEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 100 KDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D I +E F+ Y+V++L+ +L + I +++ ++ + + Q+L + + H
Sbjct: 69 HDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 159 VLHRDLKPSNLLLNA---NCDLKICDFGLA-----------RTTSETDFMTEYVVTRWDT 204
++HRDLKP NLLL + +K+ DFGLA +++ V+ +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 205 LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVA 264
P + + + L+G P F D R Y +Q+ S ++ ++P A
Sbjct: 184 GKPVDMWACGVILYILLVGYPP-----FWDEDQHRLY-QQIKAGAYDFPSPEWDTVTPEA 237
Query: 265 IDLAERMLVFDPAKRITVEEALNHPYL------SSLHEINEEPTCPYPFN 308
DL +ML +PAKRIT EAL HP++ +S+ E C FN
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFN 287
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 28/271 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT----NAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + IV T +E A K I ++ + + I RE+ +L + H NI
Sbjct: 18 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + DI E DV ++ EL+ +L + K++LT+D FL Q+L G+ Y+H
Sbjct: 78 ITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 132
Query: 156 SANVLHRDLKPSNLLL----NANCDLKICDFGLARTTSETD-----FMT-EYV---VTRW 202
S + H DLKP N++L N +K+ DFG+A + F T E+V + +
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNY 192
Query: 203 DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ L D + + +IT +L S LG + + + + V + F N S
Sbjct: 193 EPLGLEAD-MWSIGVITYILLSGASPFLG----ETKQETLTNISAVNYDFDEEYFSNTSE 247
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
+A D R+LV DP +R+ + ++L H ++ +
Sbjct: 248 LAKDFIRRLLVKDPKRRMXIAQSLEHSWIKA 278
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 132/265 (49%), Gaps = 25/265 (9%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+ +G+GA+ +V V+ T E A K I + D +++ RE ++ + H NIV++
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 101 DIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
D I +E F+ Y+V++L+ +L + I +++ ++ + + Q+L + Y HS +
Sbjct: 72 DSI---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 160 LHRDLKPSNLLLNA---NCDLKICDFGLARTTSETD----------FMTEYVVTRWDTLF 206
+HR+LKP NLLL + +K+ DFGLA ++++ +++ V+ +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 207 PGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
P + + + L+G P F D R Y + P S ++ ++P A
Sbjct: 187 PVDIWACGVILYILLVGYPP-----FWDEDQHRLYAQIKAGAYDYP-SPEWDTVTPEAKS 240
Query: 267 LAERMLVFDPAKRITVEEALNHPYL 291
L + ML +P KRIT ++AL P++
Sbjct: 241 LIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 127/283 (44%), Gaps = 39/283 (13%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKIT-NAFDNRIDAKRILREIKLL 88
FQ S ++ +G GAYG V + T E AIK I ++ ++ +L E+ +L
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLL 148
+ H NI+K+ + DK + V VY +L I +Q ++ + Q+L
Sbjct: 76 KQLDHPNIMKLYEFFE--DKRNYYLVMEVYR--GGELFDEIILRQKFSEVDAAVIMKQVL 131
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCD---LKICDFGLARTTSETDFMTEYVVTRW--- 202
G Y+H N++HRDLKP NLLL + +KI DFGL+ M E + T +
Sbjct: 132 SGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 191
Query: 203 ----DTLFPGKDYVQQLTMITELL-------GSPDDSDLGFLRSDNARRYVKQLPHVPKQ 251
+ K V +I +L G D ++ L V K
Sbjct: 192 PEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI--------------LKRVEKG 237
Query: 252 PFSQKFPNMSPV---AIDLAERMLVFDPAKRITVEEALNHPYL 291
FS P+ + V A L + ML ++P+KRI+ EEALNHP++
Sbjct: 238 KFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 132/265 (49%), Gaps = 25/265 (9%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+ +G+GA+ +V V+ T E A K I + D +++ RE ++ + H NIV++
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 101 DIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
D I +E F+ Y+V++L+ +L + I +++ ++ + + Q+L + Y HS +
Sbjct: 72 DSI---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 160 LHRDLKPSNLLLNA---NCDLKICDFGLARTTSETD----------FMTEYVVTRWDTLF 206
+HR+LKP NLLL + +K+ DFGLA ++++ +++ V+ +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 207 PGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
P + + + L+G P F D R Y + P S ++ ++P A
Sbjct: 187 PVDIWACGVILYILLVGYPP-----FWDEDQHRLYAQIKAGAYDYP-SPEWDTVTPEAKS 240
Query: 267 LAERMLVFDPAKRITVEEALNHPYL 291
L + ML +P KRIT ++AL P++
Sbjct: 241 LIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 132/265 (49%), Gaps = 25/265 (9%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+ +G+GA+ +V V+ T E A K I + D +++ RE ++ + H NIV++
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 101 DIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
D I +E F+ Y+V++L+ +L + I +++ ++ + + Q+L + Y HS +
Sbjct: 71 DSI---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 125
Query: 160 LHRDLKPSNLLLNA---NCDLKICDFGLARTTSETD----------FMTEYVVTRWDTLF 206
+HR+LKP NLLL + +K+ DFGLA ++++ +++ V+ +
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 185
Query: 207 PGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
P + + + L+G P F D R Y + P S ++ ++P A
Sbjct: 186 PVDIWACGVILYILLVGYPP-----FWDEDQHRLYAQIKAGAYDYP-SPEWDTVTPEAKS 239
Query: 267 LAERMLVFDPAKRITVEEALNHPYL 291
L + ML +P KRIT ++AL P++
Sbjct: 240 LIDSMLTVNPKKRITADQALKVPWI 264
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 132/265 (49%), Gaps = 25/265 (9%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+ +G+GA+ +V V+ T E A K I + D +++ RE ++ + H NIV++
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 101 DIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
D I +E F+ Y+V++L+ +L + I +++ ++ + + Q+L + Y HS +
Sbjct: 95 DSI---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 149
Query: 160 LHRDLKPSNLLLNA---NCDLKICDFGLARTTSETD----------FMTEYVVTRWDTLF 206
+HR+LKP NLLL + +K+ DFGLA ++++ +++ V+ +
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
Query: 207 PGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
P + + + L+G P F D R Y + P S ++ ++P A
Sbjct: 210 PVDIWACGVILYILLVGYPP-----FWDEDQHRLYAQIKAGAYDYP-SPEWDTVTPEAKS 263
Query: 267 LAERMLVFDPAKRITVEEALNHPYL 291
L + ML +P KRIT ++AL P++
Sbjct: 264 LIDSMLTVNPKKRITADQALKVPWI 288
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 133/265 (50%), Gaps = 31/265 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G+G++ V A + T EVAIK I A +R+ E+K+ C + H +I+++ +
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 102 IIPPMDKEKFNDVYIVYELM-DTDLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSANV 159
E N VY+V E+ + ++++ ++++ + +++ ++F++Q++ G+ Y+HS +
Sbjct: 79 YF-----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI 133
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLART-----------TSETDFMTEYVVTRWDTLFPG 208
LHRDL SNLLL N ++KI DFGLA ++++ + TR
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLES 193
Query: 209 KDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPVAIDL 267
+ T L+G P +D + + ++ + P+ +S A DL
Sbjct: 194 DVWSLGCMFYTLLIGRPP------FDTDTVKNTLNKVVLADYE-----MPSFLSIEAKDL 242
Query: 268 AERMLVFDPAKRITVEEALNHPYLS 292
++L +PA R+++ L+HP++S
Sbjct: 243 IHQLLRRNPADRLSLSSVLDHPFMS 267
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + IV T E A K I + A + + I RE+ +L + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + D+ E DV ++ EL+ +L + K++L+++ F+ Q+L G+ Y+H
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSE-TDFMT-----EYV---VTRW 202
+ + H DLKP N +LL+ N +K+ DFGLA + +F E+V + +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 203 DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ L D + + +IT +L S LG D + + + V + F + S
Sbjct: 193 EPLGLEAD-MWSIGVITYILLSGASPFLG----DTKQETLANITSVSYDFDEEFFSHTSE 247
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLS 292
+A D ++LV + KR+T++EAL HP+++
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + IV T E A K I + A + + I RE+ +L + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + D+ E DV ++ EL+ +L + K++L+++ F+ Q+L G+ Y+H
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSE-TDFMT-----EYV---VTRW 202
+ + H DLKP N +LL+ N +K+ DFGLA + +F E+V + +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 203 DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ L D + + +IT +L S LG D + + + V + F + S
Sbjct: 193 EPLGLEAD-MWSIGVITYILLSGASPFLG----DTKQETLANITSVSYDFDEEFFSHTSE 247
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLS 292
+A D ++LV + KR+T++EAL HP+++
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 28/270 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + IV T E A K I + A + + I RE+ +L + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + D+ E DV ++ EL+ +L + K++L+++ F+ Q+L G+ Y+H
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSE-TDFMT-----EYV---VTRW 202
+ + H DLKP N +LL+ N +K+ DFGLA + +F E+V + +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 203 DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ L D + + +IT +L S LG D + + + V + F + S
Sbjct: 193 EPLGLEAD-MWSIGVITYILLSGASPFLG----DTKQETLANITSVSYDFDEEFFSHTSE 247
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLS 292
+A D ++LV + KR+T++EAL HP+++
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 26/268 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+ +G+GA+ +V V +E A K I + D +++ RE ++ + H NIV++
Sbjct: 27 FEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 86
Query: 100 KDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D I Y++++L+ +L + I +++ ++ + + Q+L + + H
Sbjct: 87 HDSISEEGHH-----YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 159 VLHRDLKPSNLLLNA---NCDLKICDFGLA-----------RTTSETDFMTEYVVTRWDT 204
V+HRDLKP NLLL + +K+ DFGLA +++ V+ +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 205 LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVA 264
P + + + L+G P F D R Y +Q+ S ++ ++P A
Sbjct: 202 GKPVDLWACGVILYILLVGYPP-----FWDEDQHRLY-QQIKAGAYDFPSPEWDTVTPEA 255
Query: 265 IDLAERMLVFDPAKRITVEEALNHPYLS 292
DL +ML +P+KRIT EAL HP++S
Sbjct: 256 KDLINKMLTINPSKRITAAEALKHPWIS 283
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + IV T E A K I + A + + I RE+ +L + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + D+ E DV ++ EL+ +L + K++L+++ F+ Q+L G+ Y+H
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSE-TDFMT-----EYV---VTRW 202
+ + H DLKP N +LL+ N +K+ DFGLA + +F E+V + +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 203 DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ L D + + +IT +L S LG D + + + V + F S
Sbjct: 193 EPLGLEAD-MWSIGVITYILLSGASPFLG----DTKQETLANITAVSYDFDEEFFSQTSE 247
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLS 292
+A D ++LV + KR+T++EAL HP+++
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + IV T E A K I + A + + I RE+ +L + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + D+ E DV ++ EL+ +L + K++L+++ F+ Q+L G+ Y+H
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSE-TDFMT-----EYV---VTRW 202
+ + H DLKP N +LL+ N +K+ DFGLA + +F E+V + +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 203 DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ L D + + +IT +L S LG D + + + V + F S
Sbjct: 193 EPLGLEAD-MWSIGVITYILLSGASPFLG----DTKQETLANITAVSYDFDEEFFSQTSE 247
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLS 292
+A D ++LV + KR+T++EAL HP+++
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 124/273 (45%), Gaps = 39/273 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT-NAFDNRIDAKRILREIKLLCHMTHENIVK 98
++ +G GAYG V + T E AIK I ++ ++ +L E+ +L + H NI+K
Sbjct: 9 VKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ + DK + V VY +L I +Q ++ + Q+L G Y+H N
Sbjct: 69 LYEFFE--DKRNYYLVMEVYR--GGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 124
Query: 159 VLHRDLKPSNLLLNANCD---LKICDFGLARTTSETDFMTEYVVTRW-------DTLFPG 208
++HRDLKP NLLL + +KI DFGL+ M E + T + +
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDE 184
Query: 209 KDYVQQLTMITELL-------GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMS 261
K V +I +L G D ++ L V K FS P+ +
Sbjct: 185 KCDVWSCGVILYILLCGYPPFGGQTDQEI--------------LKRVEKGKFSFDPPDWT 230
Query: 262 PV---AIDLAERMLVFDPAKRITVEEALNHPYL 291
V A L + ML ++P+KRI+ EEALNHP++
Sbjct: 231 QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 53/290 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKIT------------------------NAFDNRIDA 78
IG+G+YG+V A N A+K ++ R
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 79 KRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDD 138
+++ +EI +L + H N+VK+ ++ +D + +Y+V+EL++ + + + L++D
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEV---LDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED 137
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFG-----------LART 187
+++ L++G++Y+H ++HRD+KPSNLL+ + +KI DFG L+ T
Sbjct: 138 QARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 188 TSETDFMTEYVVTRWDTLFPGKD---YVQQLTMITELLGSPD--DSDLGFLRSDNARRYV 242
FM ++ +F GK + +T+ + G D + L S +
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHS----KIK 253
Query: 243 KQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLS 292
Q P Q P+++ DL RML +P RI V E HP+++
Sbjct: 254 SQALEFPDQ------PDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 36/274 (13%)
Query: 35 KYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE 94
KY + IG G + V A + T E VAIK I + D RI EI+ L ++ H+
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+I ++ ++ E N +++V E +L I S+ L+++ + Q++ + Y
Sbjct: 69 HICQLYHVL-----ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAY 123
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGL-ARTTSETDFMTEYVVTRWDTLFP----G 208
+HS HRDLKP NLL + LK+ DFGL A+ D+ + P G
Sbjct: 124 VHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQG 183
Query: 209 KDYVQQ-----------LTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKF 257
K Y+ ++ L DD+ + + +Y VPK
Sbjct: 184 KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKY-----DVPKW------ 232
Query: 258 PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+SP +I L ++ML DP KRI+++ LNHP++
Sbjct: 233 --LSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 36/272 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNA-FDNR--IDAKRILREIKLLCHM-THENIVK 98
IG+G + +V +N ET ++ A+K + A F + + + + RE + CHM H +IV+
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI-CHMLKHPHIVE 92
Query: 99 VKDIIPPMDKEKFNDVYIVYELMD-TDL-HQIIRSKQA---LTDDHCQYFLYQLLRGLKY 153
+ + +Y+V+E MD DL +I++ A ++ +++ Q+L L+Y
Sbjct: 93 LLETY-----SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 154 IHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETD-----------FMTEYVV 199
H N++HRD+KP +LL + + +K+ FG+A E+ FM VV
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 200 TRWDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN 259
R P + + + L G L F + R + + + +++ +
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSGC-----LPFYGTKE--RLFEGIIKGKYKMNPRQWSH 260
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+S A DL RML+ DPA+RITV EALNHP+L
Sbjct: 261 ISESAKDLVRRMLMLDPAERITVYEALNHPWL 292
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIKLLCHMTHENI 96
+ +G G + IV T E A K I + A + + I RE+ +L + H NI
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + D+ E DV ++ EL+ +L + K++L+++ F+ Q+L G+ Y+H
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 156 SANVLHRDLKPSN-LLLNANC---DLKICDFGLARTTSE-TDFMT-----EYV---VTRW 202
+ + H DLKP N +LL+ N +K+ DFGLA + +F E+V + +
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 203 DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ L D + + +IT +L S LG D + + + V + F S
Sbjct: 193 EPLGLEAD-MWSIGVITYILLSGASPFLG----DTKQETLANITAVSYDFDEEFFSQTSE 247
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLS 292
+A D ++LV + KR+T++EAL HP+++
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 36/272 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNA-FDNR--IDAKRILREIKLLCHM-THENIVK 98
IG+G + +V +N ET ++ A+K + A F + + + + RE + CHM H +IV+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI-CHMLKHPHIVE 90
Query: 99 VKDIIPPMDKEKFNDVYIVYELMD-TDL-HQIIRSKQA---LTDDHCQYFLYQLLRGLKY 153
+ + +Y+V+E MD DL +I++ A ++ +++ Q+L L+Y
Sbjct: 91 LLETY-----SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 154 IHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETD-----------FMTEYVV 199
H N++HRD+KP +LL + + +K+ FG+A E+ FM VV
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 200 TRWDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN 259
R P + + + L G L F + R + + + +++ +
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGC-----LPFYGTKE--RLFEGIIKGKYKMNPRQWSH 258
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+S A DL RML+ DPA+RITV EALNHP+L
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 35/270 (12%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G+G++G V + T +E A+K I+ + D + +LRE++LL + H NI K+ +
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 102 IIPPMDKEKF---NDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
DK F +VY EL D I S++ ++ + Q+L G+ Y H
Sbjct: 94 FFE--DKGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 159 VLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVVTRW----DTLFPGKD- 210
++HRDLKP NLLL + + +++I DFGL+ + + + T + + L D
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDE 206
Query: 211 ----YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPV 263
+ + + L G P ++ L+ +Y +LP K +S
Sbjct: 207 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK---------VSES 257
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL + L + P+ RI+ +AL+H ++ +
Sbjct: 258 AKDLIRKXLTYVPSXRISARDALDHEWIQT 287
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 34/301 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVKVKD 101
+G+G + +++TKE A K + + + + ++ EI + + H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
E + V++V EL L ++ + ++ALT+ +Y+L Q++ G +Y+H V+
Sbjct: 89 FF-----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 143
Query: 161 HRDLKPSNLLLNANCDLKICDFGLA----------RTTSET-DFMTEYVVTRWDTLFPGK 209
HRDLK NL LN + ++KI DFGLA +T T +++ V+++ F
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 203
Query: 210 DYVQQLTMITELLGSP--DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
+ M T L+G P + S L + R K +PK +++PVA L
Sbjct: 204 VWSIGCIMYTLLVGKPPFETSCL----KETYLRIKKNEYSIPK--------HINPVAASL 251
Query: 268 AERMLVFDPAKRITVEEALNHPYLSSLHEINEEP-TC-PYPFNFDFEQTSMNEEDIKELI 325
++ML DP R T+ E LN + +S + P TC P F +S++ + K L
Sbjct: 252 IQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPLT 311
Query: 326 L 326
+
Sbjct: 312 V 312
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 36/302 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVKVKD 101
+G+G + +++TKE A K + + + + ++ EI + + H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
E + V++V EL L ++ + ++ALT+ +Y+L Q++ G +Y+H V+
Sbjct: 109 FF-----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 163
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETD------------FMTEYVVTRWDTLFPG 208
HRDLK NL LN + ++KI DFGLA T E D ++ V+++ F
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 209 KDYVQQLTMITELLGSP--DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
+ M T L+G P + S L + R K +PK +++PVA
Sbjct: 223 DVWSIGCIMYTLLVGKPPFETSCL----KETYLRIKKNEYSIPK--------HINPVAAS 270
Query: 267 LAERMLVFDPAKRITVEEALNHPYLSSLHEINEEP-TC-PYPFNFDFEQTSMNEEDIKEL 324
L ++ML DP R T+ E LN + +S + P TC P F +S++ + K L
Sbjct: 271 LIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPL 330
Query: 325 IL 326
+
Sbjct: 331 TV 332
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 34/301 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVKVKD 101
+G+G + +++TKE A K + + + + ++ EI + + H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
E + V++V EL L ++ + ++ALT+ +Y+L Q++ G +Y+H V+
Sbjct: 85 FF-----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 161 HRDLKPSNLLLNANCDLKICDFGLA----------RTTSET-DFMTEYVVTRWDTLFPGK 209
HRDLK NL LN + ++KI DFGLA +T T +++ V+++ F
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 210 DYVQQLTMITELLGSP--DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
+ M T L+G P + S L + R K +PK +++PVA L
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCL----KETYLRIKKNEYSIPK--------HINPVAASL 247
Query: 268 AERMLVFDPAKRITVEEALNHPYLSSLHEINEEP-TC-PYPFNFDFEQTSMNEEDIKELI 325
++ML DP R T+ E LN + +S + P TC P F +S++ + K L
Sbjct: 248 IQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPLT 307
Query: 326 L 326
+
Sbjct: 308 V 308
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 36/302 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVKVKD 101
+G+G + +++TKE A K + + + + ++ EI + + H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
E + V++V EL L ++ + ++ALT+ +Y+L Q++ G +Y+H V+
Sbjct: 107 FF-----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 161
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETD------------FMTEYVVTRWDTLFPG 208
HRDLK NL LN + ++KI DFGLA T E D ++ V+++ F
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 209 KDYVQQLTMITELLGSP--DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
+ M T L+G P + S L + R K +PK +++PVA
Sbjct: 221 DVWSIGCIMYTLLVGKPPFETSCL----KETYLRIKKNEYSIPK--------HINPVAAS 268
Query: 267 LAERMLVFDPAKRITVEEALNHPYLSSLHEINEEP-TC-PYPFNFDFEQTSMNEEDIKEL 324
L ++ML DP R T+ E LN + +S + P TC P F +S++ + K L
Sbjct: 269 LIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPL 328
Query: 325 IL 326
+
Sbjct: 329 TV 330
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 34/301 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVKVKD 101
+G+G + +++TKE A K + + + + ++ EI + + H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
E + V++V EL L ++ + ++ALT+ +Y+L Q++ G +Y+H V+
Sbjct: 85 FF-----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 161 HRDLKPSNLLLNANCDLKICDFGLA----------RTTSET-DFMTEYVVTRWDTLFPGK 209
HRDLK NL LN + ++KI DFGLA +T T +++ V+++ F
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 210 DYVQQLTMITELLGSP--DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
+ M T L+G P + S L + R K +PK +++PVA L
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCL----KETYLRIKKNEYSIPK--------HINPVAASL 247
Query: 268 AERMLVFDPAKRITVEEALNHPYLSSLHEINEEP-TC-PYPFNFDFEQTSMNEEDIKELI 325
++ML DP R T+ E LN + +S + P TC P F +S++ + K L
Sbjct: 248 IQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPXFSIAPSSLDPSNRKPLT 307
Query: 326 L 326
+
Sbjct: 308 V 308
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 51/284 (17%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G + V A + T EVAIK I N +++ RE++++ + H NIVK+
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++I E +Y++ E ++ + + + + + Q++ ++Y H
Sbjct: 77 FEVI-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVV-TRWDT-----------LF 206
++HRDLK NLLL+A+ ++KI DFG F E+ V + DT LF
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFG---------FSNEFTVGGKLDTFCGSPPYAAPELF 182
Query: 207 PGKDY------VQQLTMITELLGSP----DDSDLGFLRSDNAR-RYVKQLPHVPKQPFSQ 255
GK Y V L +I L S D +L LR R +Y + PF
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY--------RIPFY- 233
Query: 256 KFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
MS +L +R LV +P KR T+E+ + ++++ HE +E
Sbjct: 234 ----MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDE 273
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 33/274 (12%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ +G G+YG V A++ ET + VAIK++ D + I++EI ++ ++VK
Sbjct: 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPV----ESDLQEIIKEISIMQQCDSPHVVKY 89
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSA 157
K D++IV E + IIR + + LT+D L L+GL+Y+H
Sbjct: 90 YG-----SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQ--- 214
+HRD+K N+LLN K+ DFG+A TD M + + + +Q+
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 215 ----------LTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVA 264
+T I G P +D+ +R+ + +P P F +K S
Sbjct: 203 NCVADIWSLGITAIEMAEGKPPYADIHPMRA------IFMIPTNPPPTF-RKPELWSDNF 255
Query: 265 IDLAERMLVFDPAKRITVEEALNHPYLSSLHEIN 298
D ++ LV P +R T + L HP++ S ++
Sbjct: 256 TDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 26/268 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+ +G+GA+ +V V +E A I + D +++ RE ++ + H NIV++
Sbjct: 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRL 75
Query: 100 KDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D I Y++++L+ +L + I +++ ++ + + Q+L + + H
Sbjct: 76 HDSISEEGHH-----YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 159 VLHRDLKPSNLLLNA---NCDLKICDFGLA-----------RTTSETDFMTEYVVTRWDT 204
V+HR+LKP NLLL + +K+ DFGLA +++ V+ +
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 205 LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVA 264
P + + + L+G P F D R Y +Q+ S ++ ++P A
Sbjct: 191 GKPVDLWACGVILYILLVGYPP-----FWDEDQHRLY-QQIKAGAYDFPSPEWDTVTPEA 244
Query: 265 IDLAERMLVFDPAKRITVEEALNHPYLS 292
DL +ML +P+KRIT EAL HP++S
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 116/267 (43%), Gaps = 36/267 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IGRG++G V AV T+ A KKI F +D R +EI+++ + H NI+++ +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVD--RFKQEIEIMKSLDHPNIIRLYET 74
Query: 103 IPPMDKEKFNDVYIVYEL-MDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLH 161
E D+Y+V EL +L + + K+ + + +L + Y H NV H
Sbjct: 75 F-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 162 RDLKPSNLLL---NANCDLKICDFGLARTTSETDFMTEYVVTRW-------DTLF-PGKD 210
RDLKP N L + + LK+ DFGLA M V T + + L+ P D
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECD 189
Query: 211 YVQQLTMITELL------GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVA 264
M+ LL +P D ++ R P + + N+SP A
Sbjct: 190 EWSAGVMMYVLLCGYPPFSAPTDXEVML----KIREGTFTFPE-------KDWLNVSPQA 238
Query: 265 IDLAERMLVFDPAKRITVEEALNHPYL 291
L R+L P +RIT +AL H +
Sbjct: 239 ESLIRRLLTKSPKQRITSLQALEHEWF 265
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 116/267 (43%), Gaps = 36/267 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IGRG++G V AV T+ A KKI F +D R +EI+++ + H NI+++ +
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVD--RFKQEIEIMKSLDHPNIIRLYET 91
Query: 103 IPPMDKEKFNDVYIVYEL-MDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLH 161
E D+Y+V EL +L + + K+ + + +L + Y H NV H
Sbjct: 92 F-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 146
Query: 162 RDLKPSNLLL---NANCDLKICDFGLARTTSETDFMTEYVVTRW-------DTLF-PGKD 210
RDLKP N L + + LK+ DFGLA M V T + + L+ P D
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECD 206
Query: 211 YVQQLTMITELL------GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVA 264
M+ LL +P D ++ R P + + N+SP A
Sbjct: 207 EWSAGVMMYVLLCGYPPFSAPTDXEVML----KIREGTFTFPE-------KDWLNVSPQA 255
Query: 265 IDLAERMLVFDPAKRITVEEALNHPYL 291
L R+L P +RIT +AL H +
Sbjct: 256 ESLIRRLLTKSPKQRITSLQALEHEWF 282
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 34/268 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + + + LR E+++ H+ H NI+++
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 78 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
S V+HRD+KP NLLL +N +LKI DFG + +R DTL DY+
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFG---------WSVHAPSSRRDTLCGTLDYLPPE 180
Query: 216 TMITELLGSPDD-SDLGFLRSD--------NARRYVKQLPHVPKQPFSQKFPN-MSPVAI 265
+ + D LG L + A Y + + + F+ FP+ ++ A
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT--FPDFVTEGAR 238
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
DL R+L + ++R+T+ E L HP++ +
Sbjct: 239 DLISRLLKHNASQRLTLAEVLEHPWIKA 266
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 34/267 (12%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVKVKD 101
+G+G + +++TKE A K + + + + ++ EI + + H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
E + V++V EL L ++ + ++ALT+ +Y+L Q++ G +Y+H V+
Sbjct: 83 FF-----EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVI 137
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETD------------FMTEYVVTRWDTLFPG 208
HRDLK NL LN + ++KI DFGLA T E D ++ V+++ F
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 209 KDYVQQLTMITELLGSP--DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
+ M T L+G P + S L + R K +PK +++PVA
Sbjct: 197 DVWSIGCIMYTLLVGKPPFETSCL----KETYLRIKKNEYSIPK--------HINPVAAS 244
Query: 267 LAERMLVFDPAKRITVEEALNHPYLSS 293
L ++ML DP R T+ E LN + +S
Sbjct: 245 LIQKMLQTDPTARPTINELLNDEFFTS 271
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 31/274 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G + V A + T +EVA++ I N +++ RE++++ + H NIVK+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++I E +Y+V E ++ + + + + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVT---RWDTLFPGKDY---- 211
++HRDLK NLLL+A+ ++KI DFG + + + + E+ + LF GK Y
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPE 193
Query: 212 --VQQLTMITELLGSP----DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
V L +I L S D +L LR + L + PF MS
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRE-------RVLRGKYRIPFY-----MSTDCE 241
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
+L ++ L+ +P+KR T+E+ + +++ HE +E
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 275
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 128/274 (46%), Gaps = 31/274 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G + V A + T EVAIK I N +++ RE++++ + H NIVK+
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++I E +Y++ E ++ + + + + + Q++ ++Y H
Sbjct: 80 FEVI-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVT---RWDTLFPGKDY---- 211
++HRDLK NLLL+A+ ++KI DFG + + + + LF GK Y
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 212 --VQQLTMITELLGSP----DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
V L +I L S D +L LR + L + PF MS
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDGQNLKELRE-------RVLRGKYRIPFY-----MSTDCE 242
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
+L +R LV +P KR T+E+ + ++++ HE +E
Sbjct: 243 NLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDE 276
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 47/290 (16%)
Query: 24 NILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR 83
+ L + F+V S+ +GRGA IV T++ A+K + D +I +
Sbjct: 49 DALSDFFEVESE-------LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI----VRT 97
Query: 84 EIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQY 142
EI +L ++H NI+K+K+I E ++ +V EL+ +L I K ++
Sbjct: 98 EIGVLLRLSHPNIIKLKEIF-----ETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD 152
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSETDFMTEYVV 199
+ Q+L + Y+H ++HRDLKP NLL + LKI DFGL++ M
Sbjct: 153 AVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCG 212
Query: 200 T---------RWDTLFPGKDYVQQLTMITELL---GSPDDSDLG----FLRSDNARRYVK 243
T R P D + + +IT +L P + G F R N Y
Sbjct: 213 TPGYCAPEILRGCAYGPEVD-MWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYF- 270
Query: 244 QLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
S + +S A DL +++V DP KR+T +AL HP+++
Sbjct: 271 ---------ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTG 311
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 34/268 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 75 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
S V+HRD+KP NLLL + +LKI DFG + +R DTL DY+
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFG---------WSVHAPSSRRDTLCGTLDYLPPE 177
Query: 216 TMITELLGSPDD-SDLGFLRSD--------NARRYVKQLPHVPKQPFSQKFPN-MSPVAI 265
+ + D LG L + A Y + + + F+ FP+ ++ A
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGAR 235
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
DL R+L +P++R + E L HP++++
Sbjct: 236 DLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 130/286 (45%), Gaps = 33/286 (11%)
Query: 35 KYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR--ILREIKLLCHMT 92
+Y+ IG G+ GIVC A T ++VA+KK+ D R +R + E+ ++
Sbjct: 45 EYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKM----DLRKQQRRELLFNEVVIMRDYH 100
Query: 93 HENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLK 152
H+N+V + D ++++V E ++ I + + ++ +LR L
Sbjct: 101 HDNVVDMYSSYLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALS 155
Query: 153 YIHSANVLHRDLKPSNLLLNANCDLKICDFGL-ARTTSETD----------FMTEYVVTR 201
Y+H+ V+HRD+K ++LL ++ +K+ DFG A+ + E +M V++R
Sbjct: 156 YLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISR 215
Query: 202 WDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMS 261
+ + +I + G P + L++ RR LP P + +S
Sbjct: 216 LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA--MRRIRDSLP-----PRVKDLHKVS 268
Query: 262 PVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPF 307
V + MLV +P++R T +E L HP+L ++ P+C P
Sbjct: 269 SVLRGFLDLMLVREPSQRATAQELLGHPFL----KLAGPPSCIVPL 310
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 37/266 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR--ILREIKLLCHMTHENIVKVK 100
IG G+ GIVC A + +VA+K + D R +R + E+ ++ H N+V+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM----DLRKQQRRELLFNEVVIMRDYQHFNVVE-- 106
Query: 101 DIIPPMDKEKF--NDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
M K +++++ E + I S+ L ++ +L+ L Y+H+
Sbjct: 107 -----MYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQG 161
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETD-----------FMTEYVVTRWDTLFP 207
V+HRD+K ++LL + +K+ DFG S+ +M V++R +L+
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISR--SLYA 219
Query: 208 GKDYVQQL-TMITELL-GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
+ + L M+ E++ G P SD+ + +K+L P P + +SPV
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPP------YFSDSPVQAMKRLRDSPP-PKLKNSHKVSPVLR 272
Query: 266 DLAERMLVFDPAKRITVEEALNHPYL 291
D ERMLV DP +R T +E L+HP+L
Sbjct: 273 DFLERMLVRDPQERATAQELLDHPFL 298
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 24/263 (9%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + + + LR E+++ H+ H NI+++
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 78 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL +N +LKI DFG + + T + D L P G+ +
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 187
Query: 212 VQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPVAIDLAER 270
+++ + + LG L + A Y + + + F+ FP+ ++ A DL R
Sbjct: 188 DEKVDLWS--LGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT--FPDFVTEGARDLISR 243
Query: 271 MLVFDPAKRITVEEALNHPYLSS 293
+L + ++R+T+ E L HP++ +
Sbjct: 244 LLKHNASQRLTLAEVLEHPWIKA 266
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 124/281 (44%), Gaps = 42/281 (14%)
Query: 39 PLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRI-------LREIKLLCHM 91
P + +GRG +V ++ T +E A+K I A+ + L+E+ +L +
Sbjct: 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 92 T-HENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLR 149
+ H NI+++KD E ++V++LM +L + K L++ + + LL
Sbjct: 81 SGHPNIIQLKDTY-----ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 150 GLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA---------RTTSETD--FMTEYV 198
+ +H N++HRDLKP N+LL+ + ++K+ DFG + R+ T E +
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEII 195
Query: 199 VTRWDTLFPGKD-----YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVPK 250
+ PG + + M T L GSP + LR + Y
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--------- 246
Query: 251 QPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
Q S ++ + S DL R LV P KR T EEAL HP+
Sbjct: 247 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 131/274 (47%), Gaps = 31/274 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G + V A + T +EVA+K I N +++ RE++++ + H NIVK+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++I E +Y+V E ++ + + + + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVT---RWDTLFPGKDY---- 211
++HRDLK NLLL+A+ ++KI DFG + + + + + + LF GK Y
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 212 --VQQLTMITELLGSP----DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
V L +I L S D +L LR + L + PF MS
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRE-------RVLRGKYRIPFY-----MSTDCE 241
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
+L ++ L+ +P+KR T+E+ + +++ HE +E
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 275
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 43/281 (15%)
Query: 39 PLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRI-------LREIKLLCHM 91
P IGRG +V V+ T E A+K I R+ +++ RE +L +
Sbjct: 98 PKDVIGRGVSSVVRRCVHRATGHEFAVK-IMEVTAERLSPEQLEEVREATRRETHILRQV 156
Query: 92 T-HENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLR 149
H +I+ + D E + +++V++LM +L + K AL++ + + LL
Sbjct: 157 AGHPHIITLID-----SYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLE 211
Query: 150 GLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVT--------- 200
+ ++H+ N++HRDLKP N+LL+ N +++ DFG + + + E T
Sbjct: 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEIL 271
Query: 201 --RWDTLFPGKD-----YVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPF 253
D PG + + + T L GSP F RR + L + + +
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPP-----FWH----RRQILMLRMIMEGQY 322
Query: 254 ---SQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
S ++ + S DL R+L DP R+T E+AL HP+
Sbjct: 323 QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 131/274 (47%), Gaps = 31/274 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G + V A + T +EVA+K I N +++ RE++++ + H NIVK+
Sbjct: 12 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++I E +Y+V E ++ + + + + + Q++ ++Y H
Sbjct: 72 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVT---RWDTLFPGKDY---- 211
++HRDLK NLLL+A+ ++KI DFG + + + + + + LF GK Y
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 186
Query: 212 --VQQLTMITELLGSP----DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
V L +I L S D +L LR + L + PF MS
Sbjct: 187 VDVWSLGVILYTLVSGSLPFDGQNLKELRE-------RVLRGKYRIPFY-----MSTDCE 234
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
+L ++ L+ +P+KR T+E+ + +++ HE +E
Sbjct: 235 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 268
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 131/274 (47%), Gaps = 31/274 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G + V A + T +EVA+K I N +++ RE++++ + H NIVK+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++I E +Y+V E ++ + + + + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVT---RWDTLFPGKDY---- 211
++HRDLK NLLL+A+ ++KI DFG + + + + + + LF GK Y
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 212 --VQQLTMITELLGSP----DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
V L +I L S D +L LR + L + PF MS
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRE-------RVLRGKYRIPFY-----MSTDCE 241
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
+L ++ L+ +P+KR T+E+ + +++ HE +E
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 275
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 45/273 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G+Y + ++ T E A+K I + + + IL L + H NI+ +KD+
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEIL-----LRYGQHPNIITLKDV 84
Query: 103 IPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
D K+ VY+V ELM L +I+R K ++ L+ + + ++Y+H+ V+
Sbjct: 85 ---YDDGKY--VYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVV 138
Query: 161 HRDLKPSNLLL---NANCD-LKICDFGLARTTSE-----------TDFMTEYVVTRW--- 202
HRDLKPSN+L + N + ++ICDFG A+ +F+ V+ R
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYD 198
Query: 203 ---DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN 259
D G LT T PDD+ L + ++ S + N
Sbjct: 199 AACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF----------SLSGGYWN 248
Query: 260 -MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+S A DL +ML DP +R+T L HP++
Sbjct: 249 SVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 45/276 (16%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+ IG G+Y V+ T E A+K I + R ++ I EI LL + H NI+ +K
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDKS--KRDPSEEI--EI-LLRYGQHPNIITLK 87
Query: 101 DIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D+ + VY+V ELM L +I+R K ++ + L+ + + ++Y+HS
Sbjct: 88 DVY-----DDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQG 141
Query: 159 VLHRDLKPSNLLL-----NANCDLKICDFGLARTTSE-----------TDFMTEYVVTRW 202
V+HRDLKPSN+L N C L+ICDFG A+ +F+ V+ R
Sbjct: 142 VVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 203 ------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQK 256
D G L T P D+ L + ++
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLS---------GGN 251
Query: 257 FPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLS 292
+ +S A DL +ML DP +R+T ++ L HP+++
Sbjct: 252 WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVT 287
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 141/293 (48%), Gaps = 37/293 (12%)
Query: 26 LGNL-FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILRE 84
+GN F+V + + P+ +GRGAYG+V + + + +A+K+I A N + KR+L +
Sbjct: 41 IGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMD 99
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDL----HQIIRSKQALTDDHC 140
+ + M + + +E DV+I ELMDT L Q+I Q + +D
Sbjct: 100 LDI--SMRTVDCPFTVTFYGALFRE--GDVWICMELMDTSLDKFYKQVIDKGQTIPEDIL 155
Query: 141 QYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVV 199
+++ L+++HS +V+HRD+KPSN+L+NA +K+CDFG+ + ++ + V
Sbjct: 156 GKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI------SGYLVDSVA 209
Query: 200 TRWDTLFPGKDYVQQLTMITEL--LGSPDDSD----------LGFLR--SDNARRYVKQL 245
D K Y+ + EL G SD L LR D+ +QL
Sbjct: 210 KTIDA--GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL 267
Query: 246 PHVPKQPFSQKFP--NMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHE 296
V ++P S + P S +D + L + +R T E + HP+ +LHE
Sbjct: 268 KQVVEEP-SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF-TLHE 318
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 45/276 (16%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+ IG G+Y V+ T E A+K I + R ++ I EI LL + H NI+ +K
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDKS--KRDPSEEI--EI-LLRYGQHPNIITLK 87
Query: 101 DIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D+ + VY+V ELM L +I+R K ++ + L+ + + ++Y+HS
Sbjct: 88 DVY-----DDGKHVYLVTELMRGGELLDKILRQK-FFSEREASFVLHTIGKTVEYLHSQG 141
Query: 159 VLHRDLKPSNLLL-----NANCDLKICDFGLARTTSE-----------TDFMTEYVVTRW 202
V+HRDLKPSN+L N C L+ICDFG A+ +F+ V+ R
Sbjct: 142 VVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 203 ------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQK 256
D G L T P D+ L + ++
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLS---------GGN 251
Query: 257 FPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLS 292
+ +S A DL +ML DP +R+T ++ L HP+++
Sbjct: 252 WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVT 287
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 44/282 (15%)
Query: 39 PLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRI-------LREIKLLCHM 91
P + +GRG +V ++ T +E A+K I A+ + L+E+ +L +
Sbjct: 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 92 T-HENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQYFLYQLLR 149
+ H NI+++KD E ++V++LM +L + K L++ + + LL
Sbjct: 81 SGHPNIIQLKDTY-----ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 150 GLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP-- 207
+ +H N++HRDLKP N+LL+ + ++K+ DFG + + + E T L P
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTP-SYLAPEI 194
Query: 208 ------------GKD---YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVP 249
GK+ + + M T L GSP + LR + Y
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY-------- 246
Query: 250 KQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
Q S ++ + S DL R LV P KR T EEAL HP+
Sbjct: 247 -QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 31/274 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G + V A + T +EVA+K I N +++ RE++++ + H NIVK+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++I E +Y+V E ++ + + + + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVT---RWDTLFPGKDY---- 211
++HRDLK NLLL+A+ ++KI DFG + + + + + LF GK Y
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 212 --VQQLTMITELLGSP----DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
V L +I L S D +L LR + L + PF MS
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRE-------RVLRGKYRIPFY-----MSTDCE 241
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
+L ++ L+ +P+KR T+E+ + +++ HE +E
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 275
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 30/266 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G GA+G V + E IK I N +++ ++I EI++L + H NI+K+ ++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTI-NKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 103 IPPMDKEKFNDVYIVYELMDTD--LHQIIRSK---QALTDDHCQYFLYQLLRGLKYIHSA 157
E ++++YIV E + L +I+ ++ +AL++ + + Q++ L Y HS
Sbjct: 89 F-----EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 158 NVLHRDLKPSNLLL---NANCDLKICDFGLARTTSETDFMTEYVVT---------RWDTL 205
+V+H+DLKP N+L + + +KI DFGLA + T T + D
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVT 203
Query: 206 FPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
F + + M L G L F + + V+Q + ++ + ++P A+
Sbjct: 204 FKCDIWSAGVVMYFLLTGC-----LPF--TGTSLEEVQQKATYKEPNYAVECRPLTPQAV 256
Query: 266 DLAERMLVFDPAKRITVEEALNHPYL 291
DL ++ML DP +R + + L+H +
Sbjct: 257 DLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 44/282 (15%)
Query: 39 PLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRI-------LREIKLLCHM 91
P + +GRG +V ++ T +E A+K I A+ + L+E+ +L +
Sbjct: 8 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 67
Query: 92 T-HENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQYFLYQLLR 149
+ H NI+++KD E ++V++LM +L + K L++ + + LL
Sbjct: 68 SGHPNIIQLKDTY-----ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 122
Query: 150 GLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP-- 207
+ +H N++HRDLKP N+LL+ + ++K+ DFG + + + E T L P
Sbjct: 123 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTP-SYLAPEI 181
Query: 208 ------------GKD---YVQQLTMITELLGSP---DDSDLGFLRSDNARRYVKQLPHVP 249
GK+ + + M T L GSP + LR + Y
Sbjct: 182 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY-------- 233
Query: 250 KQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
Q S ++ + S DL R LV P KR T EEAL HP+
Sbjct: 234 -QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 79 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + T + D L P G+ +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEXIEGRXH 188
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 237
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 238 ARDLISRLLKHNPSQRPXLREVLEHPWITA 267
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 34/268 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 100 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
S V+HRD+KP NLLL + +LKI DFG + +R D L DY+
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFG---------WSVHAPSSRRDDLCGTLDYLPPE 202
Query: 216 TMITELLGSPDD-SDLGFLRSD--------NARRYVKQLPHVPKQPFSQKFPN-MSPVAI 265
+ + D LG L + A Y + + + F+ FP+ ++ A
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGAR 260
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
DL R+L +P++R + E L HP++++
Sbjct: 261 DLISRLLKHNPSQRPMLREVLEHPWITA 288
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 129/301 (42%), Gaps = 61/301 (20%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +GRG Y V A+N E+VA+K + K L NI+ +
Sbjct: 42 VRKLGRGKYSEVFEAINITNNEKVAVKILKPV----KKKKIKREIKILENLRGGPNIITL 97
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y HS +
Sbjct: 98 ADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 160 LHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF-MTEYV 198
+HRD+KP N+L++ + L++ D+GLA R S D+ M +Y
Sbjct: 153 MHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 199 VTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DSDLGFL 233
+ W + F G D QL I ++LG+ D D +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 234 RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
++R+ ++ H Q +SP A+D +++L +D R+T EA+ HPY +
Sbjct: 273 LGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 326
Query: 294 L 294
+
Sbjct: 327 V 327
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 131/270 (48%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + + TE T D L P G+ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGT-LDYLPPEMIEGRMH 183
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 232
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 31/274 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G + V A + T +EVA++ I N +++ RE++++ + H NIVK+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++I E +Y+V E ++ + + + + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVT---RWDTLFPGKDY---- 211
++HRDLK NLLL+A+ ++KI DFG + + + + + + LF GK Y
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 212 --VQQLTMITELLGSP----DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
V L +I L S D +L LR + L + PF MS
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRE-------RVLRGKYRIPFY-----MSTDCE 241
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
+L ++ L+ +P+KR T+E+ + +++ HE +E
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 275
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 100 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + T + D L P G+ +
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 209
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 258
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 259 ARDLISRLLKHNPSQRPMLREVLEHPWITA 288
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 44/273 (16%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGL---ARTTSETDFMTEYVVTRWDTLFP----G 208
S V+HRD+KP NLLL + +LKI DFG A ++ TD D L P G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-----DYLPPEMIEG 180
Query: 209 KDYVQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-M 260
+ + +++ + + L+G P A Y + + + F+ FP+ +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFV 229
Query: 261 SPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
+ A DL R+L +P++R + E L HP++++
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 70 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 44/273 (16%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 79 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGL---ARTTSETDFMTEYVVTRWDTLFP----G 208
S V+HRD+KP NLLL + +LKI DFG A ++ TD D L P G
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-----DYLPPEMIEG 185
Query: 209 KDYVQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-M 260
+ + +++ + + L+G P A Y + + + F+ FP+ +
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFV 234
Query: 261 SPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
+ A DL R+L +P++R + E L HP++++
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 34/268 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 91 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
S V+HRD+KP NLLL + +LKI DFG + +R TL DY+
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFG---------WSVHAPSSRRTTLCGTLDYLPPE 193
Query: 216 TMITELLGSPDD-SDLGFLRSD--------NARRYVKQLPHVPKQPFSQKFPN-MSPVAI 265
+ + D LG L + A Y + + + F+ FP+ ++ A
Sbjct: 194 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGAR 251
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
DL R+L +P++R + E L HP++++
Sbjct: 252 DLISRLLKHNPSQRPMLREVLEHPWITA 279
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + T + D L P G+ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 186
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 235
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 34/268 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 79 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
S V+HRD+KP NLLL + +LKI DFG + +R TL DY+
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFG---------WSVHAPSSRRTTLCGTLDYLPPE 181
Query: 216 TMITELLGSPDD-SDLGFLRSD--------NARRYVKQLPHVPKQPFSQKFPN-MSPVAI 265
+ + D LG L + A Y + + + F+ FP+ ++ A
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGAR 239
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
DL R+L +P++R + E L HP++++
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 44/273 (16%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 75 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGL---ARTTSETDFMTEYVVTRWDTLFP----G 208
S V+HRD+KP NLLL + +LKI DFG A ++ TD D L P G
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-----DYLPPEMIEG 181
Query: 209 KDYVQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-M 260
+ + +++ + + L+G P A Y + + + F+ FP+ +
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFV 230
Query: 261 SPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
+ A DL R+L +P++R + E L HP++++
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 78 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + T + D L P G+ +
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 187
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 236
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 237 ARDLISRLLKHNPSQRPMLREVLEHPWITA 266
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 44/273 (16%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGL---ARTTSETDFMTEYVVTRWDTLFP----G 208
S V+HRD+KP NLLL + +LKI DFG A ++ TD D L P G
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL-----DYLPPEMIEG 180
Query: 209 KDYVQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-M 260
+ + +++ + + L+G P A Y + + + F+ FP+ +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFV 229
Query: 261 SPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
+ A DL R+L +P++R + E L HP++++
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 34/268 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
S V+HRD+KP NLLL + +LKI DFG + +R TL DY+
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFG---------WSVHAPSSRRTTLCGTLDYLPPE 179
Query: 216 TMITELLGSPDD-SDLGFLRSD--------NARRYVKQLPHVPKQPFSQKFPN-MSPVAI 265
+ + D LG L + A Y + + + F+ FP+ ++ A
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGAR 237
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
DL R+L +P++R + E L HP++++
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 73 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + T + D L P G+ +
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 182
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 231
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 232 ARDLISRLLKHNPSQRPMLREVLEHPWITA 261
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + T + D L P G+ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 183
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 232
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 70 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 34/268 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
S V+HRD+KP NLLL + +LKI DFG + +R D L DY+
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFG---------WSVHAPSSRRDDLCGTLDYLPPE 179
Query: 216 TMITELLGSPDD-SDLGFLRSD--------NARRYVKQLPHVPKQPFSQKFPN-MSPVAI 265
+ + D LG L + A Y + + + F+ FP+ ++ A
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGAR 237
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
DL R+L +P++R + E L HP++++
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 48/308 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVKVKD 101
+G G +G V + T +VA+K + +D +I REI+ L H +I+K+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
+I +D+++V E + +L I L + + Q+L G+ Y H V+
Sbjct: 84 VI-----STPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVV 138
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT-----------EYVVTRWDTLFPGK 209
HRDLKP N+LL+A+ + KI DFGL+ S+ +F+ E + R L+ G
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGR---LYAGP 195
Query: 210 D---YVQQLTMITELLGS-PDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN---MSP 262
+ + + + L G+ P D D +P + K+ F ++P
Sbjct: 196 EVDIWSSGVILYALLCGTLPFDDD--------------HVPTLFKKICDGIFYTPQYLNP 241
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIK 322
I L + ML DP KR T+++ H + + P +P + + T +++E +K
Sbjct: 242 SVISLLKHMLQVDPMKRATIKDIREHEWFK-----QDLPKYLFPEDPSYSSTMIDDEALK 296
Query: 323 ELILR-EC 329
E+ + EC
Sbjct: 297 EVCEKFEC 304
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 34/268 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 75 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
S V+HRD+KP NLLL + +LKI DFG + +R TL DY+
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFG---------WSCHAPSSRRTTLSGTLDYLPPE 177
Query: 216 TMITELLGSPDD-SDLGFLRSD--------NARRYVKQLPHVPKQPFSQKFPN-MSPVAI 265
+ + D LG L + A Y + + + F+ FP+ ++ A
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGAR 235
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
DL R+L +P++R + E L HP++++
Sbjct: 236 DLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 70 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 125/257 (48%), Gaps = 61/257 (23%)
Query: 95 NIVKVKDIIP-PMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQYFLYQLLRGLK 152
NI+K+ D + P+ K +V+E ++ TD Q+ Q LTD ++++Y+LL+ L
Sbjct: 94 NIIKLIDTVKDPVSKTPA----LVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALD 146
Query: 153 YIHSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TD 192
Y HS ++HRD+KP N++++ L++ D+GLA R S D
Sbjct: 147 YCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVD 206
Query: 193 F-MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNA 238
+ M +Y + W + F G+D QL I ++LG+ + G+L+
Sbjct: 207 YQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYLK---- 260
Query: 239 RRYVKQLPH---VPKQPFSQKFPN---------MSPVAIDLAERMLVFDPAKRITVEEAL 286
+ ++ PH + Q +++ N +SP A+DL +++L +D +R+T +EA+
Sbjct: 261 KYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAM 320
Query: 287 NHPYLSSLHEINEEPTC 303
HPY + + +P+
Sbjct: 321 EHPYFYPVVKEQSQPSA 337
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 70 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 70 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 70 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 35/284 (12%)
Query: 43 IGRGAYGIVCSAVNSET--KEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+G G+YG V ++SET + V I K + +EI+LL + H+N++++
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72
Query: 101 DIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY--QLLRGLKYIHSAN 158
D++ +K+K +Y+V E + +++ S CQ Y QL+ GL+Y+HS
Sbjct: 73 DVLYNEEKQK---MYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG 129
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLA------------RTTSET-DFMTEYVVTRWDTL 205
++H+D+KP NLLL LKI G+A RT+ + F + DT
Sbjct: 130 IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTF 189
Query: 206 --FPGKDYVQQLTMITELLG-SPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
F + +T+ G P + D + +N + +P P S
Sbjct: 190 SGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS-------- 241
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTCPYP 306
DL + ML ++PAKR ++ + H + H E P P P
Sbjct: 242 ---DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV-PIP 281
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A + K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 71 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + T + D L P G+ +
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 180
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 229
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 230 ARDLISRLLKHNPSQRPMLREVLEHPWITA 259
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 68 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 70 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 70 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 129/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI +FG + + T + D L P G+ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 186
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 235
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GAYG V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 10/161 (6%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+V + + P+ +GRGAYG+V + + + +A+K+I A N + KR+L ++ +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-RATVNSQEQKRLLMDLDI-- 58
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDL----HQIIRSKQALTDDHCQYFLY 145
M + + +E DV+I ELMDT L Q+I Q + +D
Sbjct: 59 SMRTVDCPFTVTFYGALFRE--GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV 116
Query: 146 QLLRGLKYIHSA-NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+++ L+++HS +V+HRD+KPSN+L+NA +K+CDFG++
Sbjct: 117 SIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + + D L P G+ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRXXLCGTLDYLPPEMIEGRMH 183
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 232
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 130/270 (48%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + + T T D L P G+ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGT-LDYLPPEMIEGRMH 183
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 232
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 34/268 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 76 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
S V+HRD+KP NLLL + +LKI +FG + +R TL DY+
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFG---------WSVHAPSSRRTTLCGTLDYLPPE 178
Query: 216 TMITELLGSPDD-SDLGFLRSD--------NARRYVKQLPHVPKQPFSQKFPN-MSPVAI 265
+ + D LG L + A Y + + + F+ FP+ ++ A
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGAR 236
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
DL R+L +P++R + E L HP++++
Sbjct: 237 DLISRLLKHNPSQRPMLREVLEHPWITA 264
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + + D L P G+ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA--LCGTLDYLPPEMIEGRMH 183
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 232
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 76 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + + D L P G+ +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRXXLCGTLDYLPPEMIEGRMH 185
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 234
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 235 ARDLISRLLKHNPSQRPMLREVLEHPWITA 264
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + + D L P G+ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA--LCGTLDYLPPEMIEGRMH 186
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 235
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 37/278 (13%)
Query: 39 PLQPIGRGAYG--IVCSAVNSETKEEVAIKKITN------AFDNRIDAK---RILREIKL 87
++ +G GAYG ++C N +++ + + K + + DN+ K I EI L
Sbjct: 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 88 LCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQ 146
L + H NI+K+ D+ DK+ F Y+V E + +L + I ++ + + Q
Sbjct: 100 LKSLDHPNIIKLFDVFE--DKKYF---YLVTEFYEGGELFEQIINRHKFDECDAANIMKQ 154
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLL---NANCDLKICDFGLARTTSETDFMTEYVVTRWD 203
+L G+ Y+H N++HRD+KP N+LL N+ ++KI DFGL+ S+ + + + T +
Sbjct: 155 ILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY- 213
Query: 204 TLFP---GKDYVQQ-------LTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPF 253
+ P K Y ++ + M L G P N + +K++
Sbjct: 214 YIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPP------FGGQNDQDIIKKVEKGKYYFD 267
Query: 254 SQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ N+S A +L + ML +D KR T EEALN ++
Sbjct: 268 FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 34/268 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMD----TDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
F+D VY +++ ++++ ++ + ++ +L L Y H
Sbjct: 79 YGY--------FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
S V+HRD+KP NLLL + +LKI DFG + +R TL DY+
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFG---------WSVHAPSSRRTTLCGTLDYLPPE 181
Query: 216 TMITELLGSPDD-SDLGFLRSD--------NARRYVKQLPHVPKQPFSQKFPN-MSPVAI 265
+ + D LG L + A Y + + + F+ FP+ ++ A
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGAR 239
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
DL R+L +P++R + E L HP++++
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 125/272 (45%), Gaps = 38/272 (13%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G +G+ + TKE VA+K I ID + + REI + H NIV+
Sbjct: 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERG--AAID-ENVQREIINHRSLRHPNIVRF 81
Query: 100 KDII-PPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
K++I P + I+ E +L++ I + ++D ++F QLL G+ Y HS
Sbjct: 82 KEVILTP------THLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM 135
Query: 158 NVLHRDLKPSNLLLNANCD--LKICDFGLAR----------TTSETDFMTEYVVTRWDTL 205
+ HRDLK N LL+ + LKICDFG ++ T ++ V+ R +
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQE-- 193
Query: 206 FPGK---DYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN--- 259
+ GK + +T+ L+G+ F + R Y K + + +S P+
Sbjct: 194 YDGKIADVWSCGVTLYVMLVGA-----YPFEDPEEPRDYRKTIQRILSVKYS--IPDDIR 246
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+SP L R+ V DPA RI++ E H +
Sbjct: 247 ISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 77 YGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + + D L P G+ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--RXXLCGTLDYLPPEMIEGRMH 186
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + + F+ FP+ ++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQETYKRISRVEFT--FPDFVTEG 235
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 32/268 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G GA+ V A + T++ VAIK I A + + + EI +L + H NIV + D
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIAVLHKIKHPNIVALDD 83
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
I E +Y++ +L+ +L I K T+ ++Q+L +KY+H ++
Sbjct: 84 IY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 161 HRDLKPSNLL---LNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTM 217
HRDLKP NLL L+ + + I DFGL++ ++ T PG YV +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT------PG--YVAPEVL 190
Query: 218 ITELLGSPDDS-DLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
+ D +G + +N + +Q+ + S + ++S A
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
D ++ DP KR T E+AL HP+++
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 136/300 (45%), Gaps = 65/300 (21%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +GRG Y V A+N E + + K L NI+K+
Sbjct: 48 VRKLGRGKYSEVFEAINITNNE----RVVVKILKPVKKKKIKREVKILENLRGGTNIIKL 103
Query: 100 KDIIP-PMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
D + P+ K +V+E ++ TD Q+ Q LTD ++++Y+LL+ L Y HS
Sbjct: 104 IDTVKDPVSKTPA----LVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDYCHSK 156
Query: 158 NVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF-MTE 196
++HRD+KP N++++ L++ D+GLA R S D+ M +
Sbjct: 157 GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYD 216
Query: 197 YVVTRW-------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
Y + W + F G+D QL I ++LG+ + G+L+ + ++
Sbjct: 217 YSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYLK----KYHID 270
Query: 244 QLPH---VPKQPFSQKFPN---------MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
PH + Q +++ N +SP A+DL +++L +D +R+T +EA+ HPY
Sbjct: 271 LDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 32/268 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G GA+ V A + T++ VAIK I A + + + EI +L + H NIV + D
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK--EGSMENEIAVLHKIKHPNIVALDD 83
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
I E +Y++ +L+ +L I K T+ ++Q+L +KY+H ++
Sbjct: 84 IY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 161 HRDLKPSNLL---LNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTM 217
HRDLKP NLL L+ + + I DFGL++ ++ T PG YV +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT------PG--YVAPEVL 190
Query: 218 ITELLGSPDDS-DLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
+ D +G + +N + +Q+ + S + ++S A
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
D ++ DP KR T E+AL HP+++
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 31/264 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR--ILREIKLLCHMTHENIVKVK 100
IG G+ GIVC A + + VA+KK+ D R +R + E+ ++ HEN+V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 137
Query: 101 DIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
+ D ++++V E ++ I + + ++ +L+ L +H+ V+
Sbjct: 138 NSYLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 192
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTMITE 220
HRD+K ++LL + +K+ DFG S+ V R L G Y +I+
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLV-GTPYWMAPELISR 244
Query: 221 LLGSP--DDSDLGFL---RSDNARRYVKQLPHVPKQPFSQKFP-------NMSPVAIDLA 268
L P D LG + D Y + P + P +SP
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 304
Query: 269 ERMLVFDPAKRITVEEALNHPYLS 292
+R+LV DPA+R T E L HP+L+
Sbjct: 305 DRLLVRDPAQRATAAELLKHPFLA 328
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 31/264 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR--ILREIKLLCHMTHENIVKVK 100
IG G+ GIVC A + + VA+KK+ D R +R + E+ ++ HEN+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 101 DIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
+ D ++++V E ++ I + + ++ +L+ L +H+ V+
Sbjct: 93 NSYLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 147
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTMITE 220
HRD+K ++LL + +K+ DFG S+ V R L G Y +I+
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLV-GTPYWMAPELISR 199
Query: 221 LLGSP--DDSDLGFL---RSDNARRYVKQLPHVPKQPFSQKFP-------NMSPVAIDLA 268
L P D LG + D Y + P + P +SP
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 259
Query: 269 ERMLVFDPAKRITVEEALNHPYLS 292
+R+LV DPA+R T E L HP+L+
Sbjct: 260 DRLLVRDPAQRATAAELLKHPFLA 283
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 31/264 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR--ILREIKLLCHMTHENIVKVK 100
IG G+ GIVC A + + VA+KK+ D R +R + E+ ++ HEN+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 101 DIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
+ D ++++V E ++ I + + ++ +L+ L +H+ V+
Sbjct: 88 NSYLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 142
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTMITE 220
HRD+K ++LL + +K+ DFG S+ V R L G Y +I+
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLV-GTPYWMAPELISR 194
Query: 221 LLGSP--DDSDLGFL---RSDNARRYVKQLPHVPKQPFSQKFP-------NMSPVAIDLA 268
L P D LG + D Y + P + P +SP
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 254
Query: 269 ERMLVFDPAKRITVEEALNHPYLS 292
+R+LV DPA+R T E L HP+L+
Sbjct: 255 DRLLVRDPAQRATAAELLKHPFLA 278
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 32/268 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G GA+ V A + T++ VAIK I A + + + EI +L + H NIV + D
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIAVLHKIKHPNIVALDD 83
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
I E +Y++ +L+ +L I K T+ ++Q+L +KY+H ++
Sbjct: 84 IY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 161 HRDLKPSNLL---LNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTM 217
HRDLKP NLL L+ + + I DFGL++ ++ T PG YV +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT------PG--YVAPEVL 190
Query: 218 ITELLGSPDDS-DLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
+ D +G + +N + +Q+ + S + ++S A
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
D ++ DP KR T E+AL HP+++
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 21/167 (12%)
Query: 27 GNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
G+L + K + + +GRGA+G+VC A ++VAIK+I ++ + K + E++
Sbjct: 1 GSLHMIDYKEIEVEEVVGRGAFGVVCKA--KWRAKDVAIKQI----ESESERKAFIVELR 54
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQAL---TDDHCQY 142
L + H NIVK+ N V +V E + L+ ++ + L T H
Sbjct: 55 QLSRVNHPNIVKLYGAC-------LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 107
Query: 143 FLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCD-LKICDFGLA 185
+ Q +G+ Y+HS ++HRDLKP NLLL A LKICDFG A
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 31/264 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR--ILREIKLLCHMTHENIVKVK 100
IG G+ GIVC A + + VA+KK+ D R +R + E+ ++ HEN+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 101 DIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
+ D ++++V E ++ I + + ++ +L+ L +H+ V+
Sbjct: 84 NSYLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 138
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTMITE 220
HRD+K ++LL + +K+ DFG S+ V R L G Y +I+
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLV-GTPYWMAPELISR 190
Query: 221 LLGSP--DDSDLGFL---RSDNARRYVKQLPHVPKQPFSQKFP-------NMSPVAIDLA 268
L P D LG + D Y + P + P +SP
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 250
Query: 269 ERMLVFDPAKRITVEEALNHPYLS 292
+R+LV DPA+R T E L HP+L+
Sbjct: 251 DRLLVRDPAQRATAAELLKHPFLA 274
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 32/268 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G GA+ V A + T++ VAIK I A + + + EI +L + H NIV + D
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK--EGSMENEIAVLHKIKHPNIVALDD 83
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
I E +Y++ +L+ +L I K T+ ++Q+L +KY+H ++
Sbjct: 84 IY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 161 HRDLKPSNLL---LNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTM 217
HRDLKP NLL L+ + + I DFGL++ ++ T PG YV +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT------PG--YVAPEVL 190
Query: 218 ITELLGSPDDS-DLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
+ D +G + +N + +Q+ + S + ++S A
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
D ++ DP KR T E+AL HP+++
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 31/264 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR--ILREIKLLCHMTHENIVKVK 100
IG G+ GIVC A + + VA+KK+ D R +R + E+ ++ HEN+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 94
Query: 101 DIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
+ D ++++V E ++ I + + ++ +L+ L +H+ V+
Sbjct: 95 NSYLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 149
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTMITE 220
HRD+K ++LL + +K+ DFG S+ V R L G Y +I+
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLV-GTPYWMAPELISR 201
Query: 221 LLGSP--DDSDLGFL---RSDNARRYVKQLPHVPKQPFSQKFP-------NMSPVAIDLA 268
L P D LG + D Y + P + P +SP
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 261
Query: 269 ERMLVFDPAKRITVEEALNHPYLS 292
+R+LV DPA+R T E L HP+L+
Sbjct: 262 DRLLVRDPAQRATAAELLKHPFLA 285
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ +Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQL---RQTLTDYDIRFYMYEILKALDYC 147
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 289 PYLSSL 294
PY ++
Sbjct: 322 PYFYTV 327
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 31/264 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR--ILREIKLLCHMTHENIVKVK 100
IG G+ GIVC A + + VA+KK+ D R +R + E+ ++ HEN+V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM----DLRKQQRRELLFNEVVIMRDYQHENVVEMY 214
Query: 101 DIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
+ D ++++V E ++ I + + ++ +L+ L +H+ V+
Sbjct: 215 NSYLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVI 269
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTMITE 220
HRD+K ++LL + +K+ DFG S+ V R L G Y +I+
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-------VPRRKXLV-GTPYWMAPELISR 321
Query: 221 LLGSP--DDSDLGFL---RSDNARRYVKQLPHVPKQPFSQKFP-------NMSPVAIDLA 268
L P D LG + D Y + P + P +SP
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 381
Query: 269 ERMLVFDPAKRITVEEALNHPYLS 292
+R+LV DPA+R T E L HP+L+
Sbjct: 382 DRLLVRDPAQRATAAELLKHPFLA 405
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 45/273 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG G+Y + ++ T E A+K I + + + IL L + H NI+ +KD+
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEIL-----LRYGQHPNIITLKDV 84
Query: 103 IPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
D K+ VY+V EL L +I+R K ++ L+ + + ++Y+H+ V+
Sbjct: 85 ---YDDGKY--VYVVTELXKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVV 138
Query: 161 HRDLKPSNLLL---NANCD-LKICDFGLARTTSE-----------TDFMTEYVVTRW--- 202
HRDLKPSN+L + N + ++ICDFG A+ +F+ V+ R
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYD 198
Query: 203 ---DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN 259
D G LT T PDD+ L + ++ S + N
Sbjct: 199 AACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKF----------SLSGGYWN 248
Query: 260 -MSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+S A DL + L DP +R+T L HP++
Sbjct: 249 SVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 32/269 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G +G+ + ++ E VA+K I +ID + + REI + H NIV+
Sbjct: 23 VKDIGSGNFGVARLMRDKQSNELVAVKYIERG--EKID-ENVKREIINHRSLRHPNIVRF 79
Query: 100 KDII-PPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
K++I P + IV E +L + I + ++D ++F QL+ G+ Y H+
Sbjct: 80 KEVILTP------THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 133
Query: 158 NVLHRDLKPSNLLLNANCD--LKICDFGLAR----------TTSETDFMTEYVVTRWDTL 205
V HRDLK N LL+ + LKICDFG ++ T ++ V+ + +
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE-- 191
Query: 206 FPGK---DYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ GK + +T+ L+G+ D N R+ + ++ +V Q + ++SP
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFEDPE--EPKNFRKTIHRILNV--QYAIPDYVHISP 247
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYL 291
L R+ V DPAKRI++ E NH +
Sbjct: 248 ECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 34/268 (12%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A ++K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMD----TDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
F+D VY +++ ++++ ++ + ++ +L L Y H
Sbjct: 79 YGY--------FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
S V+HRD+KP NLLL + +LKI DFG + +R L DY+
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFG---------WSVHAPSSRRXXLXGTLDYLPPE 181
Query: 216 TMITELLGSPDD-SDLGFLRSD--------NARRYVKQLPHVPKQPFSQKFPN-MSPVAI 265
+ + D LG L + A Y + + + F+ FP+ ++ A
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--FPDFVTEGAR 239
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSS 293
DL R+L +P++R + E L HP++++
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 25/269 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ +G GA+G+V V T K I + +D + EI ++ + H ++ +
Sbjct: 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKLINL 113
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQ-ALTDDHCQYFLYQLLRGLKYIHSAN 158
D ++K+ V I+ L +L I ++ +++ ++ Q GLK++H +
Sbjct: 114 HDAF----EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169
Query: 159 VLHRDLKPSNLLLNAN--CDLKICDFGLAR----------TTSETDFMTEYVVTRWDTLF 206
++H D+KP N++ +KI DFGLA TT+ +F +V R F
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGF 229
Query: 207 PGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
Y + +LG S L ++ ++ + + F ++SP A D
Sbjct: 230 ----YTDMWAI--GVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283
Query: 267 LAERMLVFDPAKRITVEEALNHPYLSSLH 295
+ +L +P KR+TV +AL HP+L H
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWLKGDH 312
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 133/314 (42%), Gaps = 65/314 (20%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G++G V A + + + VA+K + N + R ++ EI++L H+ ++
Sbjct: 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRN--EKRFH-RQAAEEIRILEHLRKQDKDNT 158
Query: 100 KDIIPPMDKEKF-NDVYIVYELMDTDLHQIIRSK--QALTDDHCQYFLYQLLRGLKYIHS 156
++I ++ F N + + +EL+ +L+++I+ Q + + F + +L+ L +H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 157 ANVLHRDLKPSNLLL--NANCDLKICDFGLA---------------RTTSETDFMTEYV- 198
++H DLKP N+LL +K+ DFG + E Y
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGM 278
Query: 199 -VTRWDT------------LFPGKDYVQQLTMITELLGSPDDSDL-------GFLRSDNA 238
+ W L PG+D QL + ELLG P L F+
Sbjct: 279 PIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGY 338
Query: 239 RRYV----------------KQLPHVPKQPFSQKFPNM-----SPVAIDLAERMLVFDPA 277
RY + + P S+++ N P+ +D ++ L +DPA
Sbjct: 339 PRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPA 398
Query: 278 KRITVEEALNHPYL 291
R+T +AL HP+L
Sbjct: 399 VRMTPGQALRHPWL 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 137/314 (43%), Gaps = 65/314 (20%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G++G V A + + + VA+K + N + R ++ EI++L H+ ++
Sbjct: 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRN--EKRFH-RQAAEEIRILEHLRKQDKDNT 158
Query: 100 KDIIPPMDKEKF-NDVYIVYELMDTDLHQIIRSK--QALTDDHCQYFLYQLLRGLKYIHS 156
++I ++ F N + + +EL+ +L+++I+ Q + + F + +L+ L +H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 157 ANVLHRDLKPSNLLL--NANCDLKICDFGLA-------RTTSETDFMT--EYV------- 198
++H DLKP N+LL +K+ DFG + T ++ F E +
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGM 278
Query: 199 -VTRWDT------------LFPGKDYVQQLTMITELLGSPDDSDL-------GFLRSDNA 238
+ W L PG+D QL + ELLG P L F+
Sbjct: 279 PIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGY 338
Query: 239 RRYV----------------KQLPHVPKQPFSQKFPNM-----SPVAIDLAERMLVFDPA 277
RY + + P S+++ N P+ +D ++ L +DPA
Sbjct: 339 PRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPA 398
Query: 278 KRITVEEALNHPYL 291
R+T +AL HP+L
Sbjct: 399 VRMTPGQALRHPWL 412
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 147
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 289 PYLSSL 294
PY ++
Sbjct: 322 PYFYTV 327
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 130/281 (46%), Gaps = 33/281 (11%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+P+G G++ I V+ ++ + A+K I+ + + ++ + +KL C H NIVK+
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRME--ANTQKEITALKL-CE-GHPNIVKLH 72
Query: 101 DIIPPMDKEKFND---VYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
++ F+D ++V EL++ +L + I+ K+ ++ Y + +L+ + ++H
Sbjct: 73 EV--------FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 157 ANVLHRDLKPSNLLL---NANCDLKICDFGLARTTSETD-------FMTEYVVTRWDTLF 206
V+HRDLKP NLL N N ++KI DFG AR + F Y
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQ- 183
Query: 207 PGKDYVQQLTMITELLGSPDDSDLGFL---RSDNARRYVKQLPHVPKQPFS---QKFPNM 260
G D L + +L + + F RS V+ + + K FS + + N+
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV 243
Query: 261 SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEP 301
S A DL + +L DP KR+ + + +L +++ P
Sbjct: 244 SQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNP 284
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 147
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 289 PYLSSL 294
PY ++
Sbjct: 322 PYFYTV 327
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 98 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 152
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 153 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 212
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 213 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 272
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 273 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 326
Query: 289 PYLSSL 294
PY ++
Sbjct: 327 PYFYTV 332
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 147
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 289 PYLSSL 294
PY ++
Sbjct: 322 PYFYTV 327
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 147
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 289 PYLSSL 294
PY ++
Sbjct: 322 PYFYTV 327
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 147
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 289 PYLSSL 294
PY ++
Sbjct: 322 PYFYTV 327
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 147
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 289 PYLSSL 294
PY ++
Sbjct: 322 PYFYTV 327
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 92 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 146
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 267 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 320
Query: 289 PYLSSL 294
PY ++
Sbjct: 321 PYFYTV 326
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 147
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 289 PYLSSL 294
PY ++
Sbjct: 322 PYFYTV 327
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 21/151 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+GRGA+G+VC A ++VAIK+I ++ + K + E++ L + H NIVK+
Sbjct: 16 VGRGAFGVVCKA--KWRAKDVAIKQI----ESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 103 IPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQAL---TDDHCQYFLYQLLRGLKYIHSAN 158
N V +V E + L+ ++ + L T H + Q +G+ Y+HS
Sbjct: 70 C-------LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 159 ---VLHRDLKPSNLLLNANCD-LKICDFGLA 185
++HRDLKP NLLL A LKICDFG A
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 61/248 (24%)
Query: 95 NIVKVKDIIP-PMDKEKFNDVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLK 152
NI+ + DI+ P+ + +V+E + +TD Q+ Q LTD ++++Y++L+ L
Sbjct: 91 NIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALD 143
Query: 153 YIHSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TD 192
Y HS ++HRD+KP N++++ + L++ D+GLA R S D
Sbjct: 144 YCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVD 203
Query: 193 F-MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------ 226
+ M +Y + W + F G D QL I ++LG+ D
Sbjct: 204 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 263
Query: 227 DSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEAL 286
D + ++R+ ++ H Q +SP A+D +++L +D R+T EA+
Sbjct: 264 DPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAM 317
Query: 287 NHPYLSSL 294
HPY ++
Sbjct: 318 EHPYFYTV 325
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 92 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 146
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 267 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 320
Query: 289 PYLSSL 294
PY ++
Sbjct: 321 PYFYTV 326
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 126/270 (46%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR-EIKLLCHMTHENIVKV 99
+P+G+G +G V A +K +A+K + A + + LR E+++ H+ H NI+++
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALT---DDHCQYFLYQLLRGLKYIH 155
F+D VY +++ L + R Q L+ + ++ +L L Y H
Sbjct: 74 YGY--------FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
S V+HRD+KP NLLL + +LKI DFG + + + D L P G+ +
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA--LCGTLDYLPPEMIEGRMH 183
Query: 212 VQQLTMITE-------LLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN-MSPV 263
+++ + + L+G P A Y + + F+ FP+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKP---------PFEANTYQDTYKRISRVEFT--FPDFVTEG 232
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL R+L +P++R + E L HP++++
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 57/255 (22%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NI+ + DI+ D + + +TD Q+ Q LTD ++++Y++L+ L Y
Sbjct: 93 NIITLADIVK--DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 147
Query: 155 HSANVLHRDLKPSNLLLN-ANCDLKICDFGLA-----------RTTSE--------TDF- 193
HS ++HRD+KP N++++ + L++ D+GLA R S D+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 194 MTEYVVTRW-------------DTLFPGKDYVQQLTMITELLGSPD------------DS 228
M +Y + W + F G D QL I ++LG+ D D
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
+ ++R+ ++ H Q +SP A+D +++L +D R+T EA+ H
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEH 321
Query: 289 PYLSSLHEINEEPTC 303
PY + + +P
Sbjct: 322 PYFYPVVKEQSQPCA 336
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 32/269 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G +G+ + ++ E VA+K I +I A + REI + H NIV+
Sbjct: 24 VKDIGSGNFGVARLMRDKQSNELVAVKYIERG--EKI-AANVKREIINHRSLRHPNIVRF 80
Query: 100 KDII-PPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
K++I P + IV E +L + I + ++D ++F QL+ G+ Y H+
Sbjct: 81 KEVILTP------THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 158 NVLHRDLKPSNLLLNANCD--LKICDFGLAR----------TTSETDFMTEYVVTRWDTL 205
V HRDLK N LL+ + LKICDFG ++ T ++ V+ + +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE-- 192
Query: 206 FPGK---DYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ GK + +T+ L+G+ D N R+ + ++ +V Q + ++SP
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPE--EPKNFRKTIHRILNV--QYAIPDYVHISP 248
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYL 291
L R+ V DPAKRI++ E NH +
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVK 98
+Q +G GA G V AVN T+E VA+K + +D + I +EI + + HEN+VK
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ + N Y+ E +L I + + Q F +QL+ G+ Y+H
Sbjct: 69 FYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ HRD+KP NLLL+ +LKI DFGLA
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 122/276 (44%), Gaps = 32/276 (11%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+ +G GA+ V A T + A+K I A + + I EI +L + HENIV +
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS--IENEIAVLRKIKHENIVAL 85
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+DI E N +Y+V +L+ +L I K T+ + Q+L + Y+H
Sbjct: 86 EDIY-----ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 159 VLHRDLKPSNLLL---NANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL 215
++HRDLKP NLL + + I DFGL++ + D M+ T PG YV
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGT------PG--YVAPE 192
Query: 216 TMITELLGSPDDS-DLGFLR-----------SDNARRYVKQLPHVPKQPFSQKFPNMSPV 263
+ + D +G + +N + +Q+ + S + ++S
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDS 252
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
A D ++ DP KR T E+A HP+++ +N+
Sbjct: 253 AKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNK 288
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 10/161 (6%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
F+V + + P+ +GRGAYG+V + + + A+K+I A N + KR+L ++ +
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRI-RATVNSQEQKRLLXDLDISX 87
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDL----HQIIRSKQALTDDHCQYFLY 145
+ +E DV+I EL DT L Q+I Q + +D
Sbjct: 88 RTVDCPFTVT--FYGALFRE--GDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAV 143
Query: 146 QLLRGLKYIHSA-NVLHRDLKPSNLLLNANCDLKICDFGLA 185
+++ L+++HS +V+HRD+KPSN+L+NA +K CDFG++
Sbjct: 144 SIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 147/330 (44%), Gaps = 48/330 (14%)
Query: 17 GGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRI 76
G ++ N + + ++V+S Q +G G G V N T+E+ A+K +
Sbjct: 4 SGLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ------- 50
Query: 77 DAKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSK 132
D + RE++L + +IV++ D+ + + + IV E +D +L I R
Sbjct: 51 DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGD 109
Query: 133 QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTS 189
QA T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 110 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 190 ETDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNA 238
+ +TE T + + L P K + + M L G P S+ G S
Sbjct: 170 SHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 229
Query: 239 RRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNHPYLSS 293
+ ++ + +FPN + +ML+ +P +R+T+ E +NHP++
Sbjct: 230 KTRIRMGQY--------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 281
Query: 294 LHEINEEPTCPYPFNFDFEQTSMNEEDIKE 323
++ P P + ++ ED+KE
Sbjct: 282 STKV---PQTPLHTSRVLKEDKERWEDVKE 308
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 28/273 (10%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVKVKD 101
+G+G + + +TKE A K + + + K ++ EI + + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
E + VY+V E+ L ++ + ++A+T+ +YF+ Q ++G++Y+H+ V+
Sbjct: 110 FF-----EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVI 164
Query: 161 HRDLKPSNLLLNANCDLKICDFGLA----------RTTSET-DFMTEYVVTRWDTLFPGK 209
HRDLK NL LN + D+KI DFGLA +T T +++ V+ + F
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVD 224
Query: 210 DYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAE 269
+ + T L+G P F S Y++ + K +S +++PVA L
Sbjct: 225 IWSLGCILYTLLVGKPP-----FETSCLKETYIR----IKKNEYSVPR-HINPVASALIR 274
Query: 270 RMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
RML DP R +V E L + +S + PT
Sbjct: 275 RMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 307
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 29/265 (10%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G GA+G+V T A K + ++ D + + +EI+ + + H +V + D
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 103 IPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
E N++ ++YE M ++ +++D ++ Q+ +GL ++H N +
Sbjct: 223 F-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 277
Query: 161 HRDLKPSNLLLNA--NCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQ----- 213
H DLKP N++ + +LK+ DFGL T+ D VT F + +
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGL---TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 214 ------QLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
+ +++ +L S S G D R VK F +S D
Sbjct: 335 YYTDMWSVGVLSYILLS-GLSPFGGENDDETLRNVKSCDW---NMDDSAFSGISEDGKDF 390
Query: 268 AERMLVFDPAKRITVEEALNHPYLS 292
++L+ DP R+T+ +AL HP+L+
Sbjct: 391 IRKLLLADPNTRMTIHQALEHPWLT 415
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+ +G GA+G+V T A K + ++ D + + +EI+ + + H +V +
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTLVNLH 114
Query: 101 DIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D E N++ ++YE M ++ +++D ++ Q+ +GL ++H N
Sbjct: 115 DAF-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 159 VLHRDLKPSNLLLNA--NCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQ--- 213
+H DLKP N++ + +LK+ DFGL T+ D VT F + +
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGL---TAHLDPKQSVKVTTGTAEFAAPEVAEGKP 226
Query: 214 --------QLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
+ +++ +L S S G D R VK F +S
Sbjct: 227 VGYYTDMWSVGVLSYILLS-GLSPFGGENDDETLRNVKSCDW---NMDDSAFSGISEDGK 282
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLS 292
D ++L+ DP R+T+ +AL HP+L+
Sbjct: 283 DFIRKLLLADPNTRMTIHQALEHPWLT 309
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 30/274 (10%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVKVKD 101
+G+G + + +TKE A K + + + K ++ EI + + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
E + VY+V E+ L ++ + ++A+T+ +YF+ Q ++G++Y+H+ V+
Sbjct: 110 FF-----EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVI 164
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETD------------FMTEYVVTRWDTLFPG 208
HRDLK NL LN + D+KI DFGLA T E D ++ V+ + F
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV 223
Query: 209 KDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLA 268
+ + T L+G P F S Y++ + K +S +++PVA L
Sbjct: 224 DIWSLGCILYTLLVGKPP-----FETSCLKETYIR----IKKNEYSVPR-HINPVASALI 273
Query: 269 ERMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
RML DP R +V E L + +S + PT
Sbjct: 274 RRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 307
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 65/314 (20%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G +G V A + + + VA+K + N + R ++ EI++L H+ ++
Sbjct: 102 LKVIGKGXFGQVVKAYDHKVHQHVALKMVRN--EKRFH-RQAAEEIRILEHLRKQDKDNT 158
Query: 100 KDIIPPMDKEKF-NDVYIVYELMDTDLHQIIRSK--QALTDDHCQYFLYQLLRGLKYIHS 156
++I ++ F N + + +EL+ +L+++I+ Q + + F + +L+ L +H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 157 ANVLHRDLKPSNLLL--NANCDLKICDFGLA---------------RTTSETDFMTEYV- 198
++H DLKP N+LL +K+ DFG + E Y
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGM 278
Query: 199 -VTRWDT------------LFPGKDYVQQLTMITELLGSPDDSDL-------GFLRSDNA 238
+ W L PG+D QL + ELLG P L F+
Sbjct: 279 PIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGY 338
Query: 239 RRYV----------------KQLPHVPKQPFSQKFPNM-----SPVAIDLAERMLVFDPA 277
RY + + P S+++ N P+ +D ++ L +DPA
Sbjct: 339 PRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPA 398
Query: 278 KRITVEEALNHPYL 291
R+T +AL HP+L
Sbjct: 399 VRMTPGQALRHPWL 412
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 30/274 (10%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVKVKD 101
+G+G + + +TKE A K + + + K ++ EI + + + ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
E + VY+V E+ L ++ + ++A+T+ +YF+ Q ++G++Y+H+ V+
Sbjct: 94 FF-----EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVI 148
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETD------------FMTEYVVTRWDTLFPG 208
HRDLK NL LN + D+KI DFGLA T E D ++ V+ + F
Sbjct: 149 HRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV 207
Query: 209 KDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLA 268
+ + T L+G P F S Y++ + K +S +++PVA L
Sbjct: 208 DIWSLGCILYTLLVGKPP-----FETSCLKETYIR----IKKNEYSVP-RHINPVASALI 257
Query: 269 ERMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
RML DP R +V E L + +S + PT
Sbjct: 258 RRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 291
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 27/270 (10%)
Query: 37 VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENI 96
V + +G G +G V + T ++A K I D + + EI ++ + H N+
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANL 148
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
+++ D E ND+ +V E +D +II LT+ F+ Q+ G++++
Sbjct: 149 IQLYDAF-----ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 155 HSANVLHRDLKPSNLL-LNANC-DLKICDFGLAR----------TTSETDFMTEYVVTRW 202
H +LH DLKP N+L +N + +KI DFGLAR +F+ VV
Sbjct: 204 HQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 263
Query: 203 DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
FP + + +I +L S LG DN + + ++F ++S
Sbjct: 264 FVSFPTDMW--SVGVIAYMLLSGLSPFLG----DNDAETLNNILACRWDLEDEEFQDISE 317
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLS 292
A + ++L+ + + RI+ EAL HP+LS
Sbjct: 318 EAKEFISKLLIKEKSWRISASEALKHPWLS 347
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 30/274 (10%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVKVKD 101
+G+G + + +TKE A K + + + K ++ EI + + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
E + VY+V E+ L ++ + ++A+T+ +YF+ Q ++G++Y+H+ V+
Sbjct: 110 FF-----EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVI 164
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETD------------FMTEYVVTRWDTLFPG 208
HRDLK NL LN + D+KI DFGLA T E D ++ V+ + F
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEV 223
Query: 209 KDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLA 268
+ + T L+G P F S Y++ + K +S +++PVA L
Sbjct: 224 DIWSLGCILYTLLVGKPP-----FETSCLKETYIR----IKKNEYSVPR-HINPVASALI 273
Query: 269 ERMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
RML DP R +V E L + +S + PT
Sbjct: 274 RRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPT 307
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G G V A ++ +VAIK I + KR RE+ ++H+NIV + D
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
+ E+ + Y+V E ++ L + I S L+ D F Q+L G+K+ H ++
Sbjct: 79 V-----DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIV 133
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
HRD+KP N+L+++N LKI DFG+A+ SET
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
FQ KYV LQ IG G++G ++E + IK+I + + + + RE+ +L
Sbjct: 20 FQSMEKYVR-LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLA 78
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQAL--TDDHCQYFLYQ 146
+M H NIV+ ++ E+ +YIV + + DL + I +++ + +D + Q
Sbjct: 79 NMKHPNIVQYRESF-----EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ 133
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
+ LK++H +LHRD+K N+ L + +++ DFG+AR + T
Sbjct: 134 ICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 28/267 (10%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G +G+ + ++ E VA+K I +ID + + REI + H NIV+
Sbjct: 24 VKDIGSGNFGVARLMRDKQSNELVAVKYIERG--EKID-ENVKREIINHRSLRHPNIVRF 80
Query: 100 KDII-PPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
K++I P + IV E +L + I + ++D ++F QL+ G+ Y H+
Sbjct: 81 KEVILTP------THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 158 NVLHRDLKPSNLLLNANCD--LKICDFGLARTT------SETDFMTEYVVTR--WDTLFP 207
V HRDLK N LL+ + LKIC FG ++++ +T Y+ +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 208 GK---DYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVA 264
GK + +T+ L+G+ D N R+ + ++ +V Q + ++SP
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPE--EPKNFRKTIHRILNV--QYAIPDYVHISPEC 250
Query: 265 IDLAERMLVFDPAKRITVEEALNHPYL 291
L R+ V DPAKRI++ E NH +
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 32/269 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G +G+ + ++ E VA+K I +ID + + REI + H NIV+
Sbjct: 24 VKDIGSGNFGVARLMRDKQSNELVAVKYIERG--EKID-ENVKREIINHRSLRHPNIVRF 80
Query: 100 KDII-PPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
K++I P + IV E +L + I + ++D ++F QL+ G+ Y H+
Sbjct: 81 KEVILTP------THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 158 NVLHRDLKPSNLLLNANCD--LKICDFGLAR----------TTSETDFMTEYVVTRWDTL 205
V HRDLK N LL+ + LKIC FG ++ T ++ V+ + +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE-- 192
Query: 206 FPGK---DYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ GK + +T+ L+G+ D N R+ + ++ +V Q + ++SP
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPE--EPKNFRKTIHRILNV--QYAIPDYVHISP 248
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYL 291
L R+ V DPAKRI++ E NH +
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV--- 99
+G+GA+G V A N+ AIKKI + + IL E+ LL + H+ +V+
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEK---LSTILSEVMLLASLNHQYVVRYYAA 70
Query: 100 ----KDIIPPMDK-EKFNDVYIVYELMDTD-LHQIIRSKQALTDDHCQYF--LYQLLRGL 151
++ + PM +K + ++I E + L+ +I S+ L +Y+ Q+L L
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEAL 129
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
YIHS ++HRDLKP N+ ++ + ++KI DFGLA+ +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 15/160 (9%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV--- 99
+G+GA+G V A N+ AIKKI + + IL E+ LL + H+ +V+
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEK---LSTILSEVMLLASLNHQYVVRYYAA 70
Query: 100 ----KDIIPPMDK-EKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYF--LYQLLRGL 151
++ + PM +K + ++I E + L+ +I S+ L +Y+ Q+L L
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQILEAL 129
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
YIHS ++HRDLKP N+ ++ + ++KI DFGLA+ +
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 148/335 (44%), Gaps = 48/335 (14%)
Query: 12 GIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNA 71
G + G ++ N + + ++V+S Q +G G G V N T+E+ A+K +
Sbjct: 1 GSHVKSGLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ-- 52
Query: 72 FDNRIDAKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII 129
D + RE++L + +IV++ D+ + + + IV E +D +L I
Sbjct: 53 -----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRI 106
Query: 130 --RSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGL 184
R QA T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG
Sbjct: 107 QDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166
Query: 185 ARTTSETDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFL 233
A+ T+ + +T T + + L P K + + M L G P S+ G
Sbjct: 167 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 226
Query: 234 RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNH 288
S + ++ + +FPN + +ML+ +P +R+T+ E +NH
Sbjct: 227 ISPGMKTRIRMGQY--------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 278
Query: 289 PYLSSLHEINEEPTCPYPFNFDFEQTSMNEEDIKE 323
P++ ++ P P + ++ ED+KE
Sbjct: 279 PWIMQSTKV---PQTPLHTSRVLKEDKERWEDVKE 310
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G + V A + T +EVA+K I N +++ RE+++ + H NIVK+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
++I E +Y+V E ++ + + + + Q++ ++Y H
Sbjct: 79 FEVI-----ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVT---RWDTLFPGKDY---- 211
++HRDLK NLLL+A+ ++KI DFG + + + + + LF GK Y
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE 193
Query: 212 --VQQLTMITELLGSP----DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAI 265
V L +I L S D +L LR + L + PF S
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRE-------RVLRGKYRIPFY-----XSTDCE 241
Query: 266 DLAERMLVFDPAKRITVEEALNHPYLSSLHEINE 299
+L ++ L+ +P+KR T+E+ + + HE +E
Sbjct: 242 NLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDE 275
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 48/330 (14%)
Query: 17 GGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRI 76
G ++ N + + ++V+S Q +G G G V N T+E+ A+K +
Sbjct: 11 SGLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ------- 57
Query: 77 DAKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSK 132
D + RE++L + +IV++ D+ + + + IV E +D +L I R
Sbjct: 58 DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGD 116
Query: 133 QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTS 189
QA T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 117 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 176
Query: 190 ETDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNA 238
+ +T T + + L P K + + M L G P S+ G S
Sbjct: 177 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 236
Query: 239 RRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNHPYLSS 293
+ ++ + +FPN + +ML+ +P +R+T+ E +NHP++
Sbjct: 237 KTRIRMGQY--------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 288
Query: 294 LHEINEEPTCPYPFNFDFEQTSMNEEDIKE 323
++ P P + ++ ED+KE
Sbjct: 289 STKV---PQTPLHTSRVLKEDKERWEDVKE 315
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 48/330 (14%)
Query: 17 GGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRI 76
G ++ N + + ++V+S Q +G G G V N T+E+ A+K +
Sbjct: 5 SGLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ------- 51
Query: 77 DAKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSK 132
D + RE++L + +IV++ D+ + + + IV E +D +L I R
Sbjct: 52 DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGD 110
Query: 133 QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTS 189
QA T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 111 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 170
Query: 190 ETDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNA 238
+ +T T + + L P K + + M L G P S+ G S
Sbjct: 171 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 230
Query: 239 RRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNHPYLSS 293
+ ++ + +FPN + +ML+ +P +R+T+ E +NHP++
Sbjct: 231 KTRIRMGQY--------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 282
Query: 294 LHEINEEPTCPYPFNFDFEQTSMNEEDIKE 323
++ P P + ++ ED+KE
Sbjct: 283 STKV---PQTPLHTSRVLKEDKERWEDVKE 309
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 146/329 (44%), Gaps = 48/329 (14%)
Query: 18 GKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRID 77
G ++ N + + ++V+S Q +G G G V N T+E+ A+K + D
Sbjct: 13 GLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ-------D 59
Query: 78 AKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSKQ 133
+ RE++L + +IV++ D+ + + + IV E +D +L I R Q
Sbjct: 60 CPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQ 118
Query: 134 ALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSE 190
A T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 119 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 178
Query: 191 TDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNAR 239
+ +T T + + L P K + + M L G P S+ G S +
Sbjct: 179 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 238
Query: 240 RYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNHPYLSSL 294
++ + +FPN + +ML+ +P +R+T+ E +NHP++
Sbjct: 239 TRIRMGQY--------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 290
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKE 323
++ P P + ++ ED+KE
Sbjct: 291 TKV---PQTPLHTSRVLKEDKERWEDVKE 316
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 146/329 (44%), Gaps = 48/329 (14%)
Query: 18 GKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRID 77
G ++ N + + ++V+S Q +G G G V N T+E+ A+K + D
Sbjct: 21 GLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ-------D 67
Query: 78 AKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSKQ 133
+ RE++L + +IV++ D+ + + + IV E +D +L I R Q
Sbjct: 68 CPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQ 126
Query: 134 ALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSE 190
A T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 127 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 186
Query: 191 TDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNAR 239
+ +T T + + L P K + + M L G P S+ G S +
Sbjct: 187 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 246
Query: 240 RYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNHPYLSSL 294
++ + +FPN + +ML+ +P +R+T+ E +NHP++
Sbjct: 247 TRIRMGQY--------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 298
Query: 295 HEINEEPTCPYPFNFDFEQTSMNEEDIKE 323
++ P P + ++ ED+KE
Sbjct: 299 TKV---PQTPLHTSRVLKEDKERWEDVKE 324
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 48/330 (14%)
Query: 17 GGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRI 76
G ++ N + + ++V+S Q +G G G V N T+E+ A+K +
Sbjct: 10 SGLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ------- 56
Query: 77 DAKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSK 132
D + RE++L + +IV++ D+ + + + IV E +D +L I R
Sbjct: 57 DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGD 115
Query: 133 QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTS 189
QA T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 116 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 175
Query: 190 ETDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNA 238
+ +T T + + L P K + + M L G P S+ G S
Sbjct: 176 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 235
Query: 239 RRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNHPYLSS 293
+ ++ + +FPN + +ML+ +P +R+T+ E +NHP++
Sbjct: 236 KTRIRMGQY--------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 287
Query: 294 LHEINEEPTCPYPFNFDFEQTSMNEEDIKE 323
++ P P + ++ ED+KE
Sbjct: 288 STKV---PQTPLHTSRVLKEDKERWEDVKE 314
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 48/330 (14%)
Query: 17 GGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRI 76
G ++ N + + ++V+S Q +G G G V N T+E+ A+K +
Sbjct: 4 SGLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ------- 50
Query: 77 DAKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSK 132
D + RE++L + +IV++ D+ + + + IV E +D +L I R
Sbjct: 51 DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGD 109
Query: 133 QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTS 189
QA T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 110 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 190 ETDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNA 238
+ +T T + + L P K + + M L G P S+ G S
Sbjct: 170 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 229
Query: 239 RRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNHPYLSS 293
+ ++ + +FPN + +ML+ +P +R+T+ E +NHP++
Sbjct: 230 KTRIRMGQY--------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 281
Query: 294 LHEINEEPTCPYPFNFDFEQTSMNEEDIKE 323
++ P P + ++ ED+KE
Sbjct: 282 STKV---PQTPLHTSRVLKEDKERWEDVKE 308
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 48/330 (14%)
Query: 17 GGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRI 76
G ++ N + + ++V+S Q +G G G V N T+E+ A+K +
Sbjct: 6 SGLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ------- 52
Query: 77 DAKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSK 132
D + RE++L + +IV++ D+ + + + IV E +D +L I R
Sbjct: 53 DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGD 111
Query: 133 QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTS 189
QA T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 190 ETDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNA 238
+ +T T + + L P K + + M L G P S+ G S
Sbjct: 172 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 231
Query: 239 RRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNHPYLSS 293
+ ++ + +FPN + +ML+ +P +R+T+ E +NHP++
Sbjct: 232 KTRIRMGQY--------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 283
Query: 294 LHEINEEPTCPYPFNFDFEQTSMNEEDIKE 323
++ P P + ++ ED+KE
Sbjct: 284 STKV---PQTPLHTSRVLKEDKERWEDVKE 310
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 48/330 (14%)
Query: 17 GGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRI 76
G ++ N + + ++V+S Q +G G G V N T+E+ A+K +
Sbjct: 50 SGLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ------- 96
Query: 77 DAKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSK 132
D + RE++L + +IV++ D+ + + + IV E +D +L I R
Sbjct: 97 DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGD 155
Query: 133 QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTS 189
QA T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 156 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 190 ETDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNA 238
+ +T T + + L P K + + M L G P S+ G S
Sbjct: 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 275
Query: 239 RRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNHPYLSS 293
+ ++ + +FPN + +ML+ +P +R+T+ E +NHP++
Sbjct: 276 KTRIRMGQY--------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327
Query: 294 LHEINEEPTCPYPFNFDFEQTSMNEEDIKE 323
++ P P + ++ ED+KE
Sbjct: 328 STKV---PQTPLHTSRVLKEDKERWEDVKE 354
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 146/330 (44%), Gaps = 48/330 (14%)
Query: 17 GGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRI 76
G ++ N + + ++V+S Q +G G G V N T+E+ A+K +
Sbjct: 56 SGLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ------- 102
Query: 77 DAKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSK 132
D + RE++L + +IV++ D+ + + + IV E +D +L I R
Sbjct: 103 DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGD 161
Query: 133 QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTS 189
QA T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 162 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 221
Query: 190 ETDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNA 238
+ +T T + + L P K + + M L G P S+ G S
Sbjct: 222 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 281
Query: 239 RRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNHPYLSS 293
+ ++ + +FPN + +ML+ +P +R+T+ E +NHP++
Sbjct: 282 KTRIRMGQY--------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 333
Query: 294 LHEINEEPTCPYPFNFDFEQTSMNEEDIKE 323
++ P P + ++ ED+KE
Sbjct: 334 STKV---PQTPLHTSRVLKEDKERWEDVKE 360
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 122/319 (38%), Gaps = 72/319 (22%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G GA+G V ++ + KI D +A R EI++L H+ +
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAAR--SEIQVLEHLNTTDPNSTFRC 79
Query: 103 IPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQAL--TDDHCQYFLYQLLRGLKYIHSANV 159
+ ++ E + IV+EL+ + I+ L DH + YQ+ + + ++HS +
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL 139
Query: 160 LHRDLKPSNLLLNA-------------------NCDLKICDFGLARTTSETDFMTEYVVT 200
H DLKP N+L N D+K+ DFG A T + + + V T
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--TYDDEHHSTLVST 197
Query: 201 R------------WD-------------------TLFPGKDYVQQLTMITELLGSP---- 225
R W T+FP D + L M+ +LG
Sbjct: 198 RHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHM 257
Query: 226 ----------DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFD 275
L + +A RYV + P + F DL ++ML +D
Sbjct: 258 IQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK-PLKEFMLSQDVEHERLFDLIQKMLEYD 316
Query: 276 PAKRITVEEALNHPYLSSL 294
PAKRIT+ EAL HP+ L
Sbjct: 317 PAKRITLREALKHPFFDLL 335
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 46/282 (16%)
Query: 36 YVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLL------- 88
Y+ + +GRG + +V ++ T +E A K + + IL EI +L
Sbjct: 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP 89
Query: 89 ----CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
H +EN +II ++ +++ L +L +++ + +
Sbjct: 90 RVINLHEVYEN---TSEIILILEYAAGGEIF---SLCLPELAEMVSENDVIR------LI 137
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNAN---CDLKICDFGLARTTSETDFMTEYVVT- 200
Q+L G+ Y+H N++H DLKP N+LL++ D+KI DFG++R + E + T
Sbjct: 138 KQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTP 197
Query: 201 --------RWDTLFPGKDYVQQLTMITELL---GSPDDSDLGFLRSDNARRYVKQLPHVP 249
+D + D + + +I +L SP F+ DN Y+ + V
Sbjct: 198 EYLAPEILNYDPITTATD-MWNIGIIAYMLLTHTSP------FVGEDNQETYLN-ISQVN 249
Query: 250 KQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
+ F ++S +A D + +LV +P KR T E L+H +L
Sbjct: 250 VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G YGIV + + + +AIK+I D+R ++ + EI L H+ H+NIV+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRY-SQPLHEEIALHKHLKHKNIVQY--- 70
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQ---YFLYQLLRGLKYIHSANV 159
+ + F +++ ++ L ++RSK D+ Q ++ Q+L GLKY+H +
Sbjct: 71 LGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 160 LHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTE 196
+HRD+K N+L+N LKI DFG ++ + + TE
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 167
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G YGIV + + + +AIK+I D+R ++ + EI L H+ H+NIV+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRY-SQPLHEEIALHKHLKHKNIVQY--- 84
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQ---YFLYQLLRGLKYIHSANV 159
+ + F +++ ++ L ++RSK D+ Q ++ Q+L GLKY+H +
Sbjct: 85 LGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 160 LHRDLKPSNLLLNANCD-LKICDFGLARTTSETDFMTEYVVTRWDTLFP 207
+HRD+K N+L+N LKI DFG ++ + + TE + P
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAP 192
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 40/273 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G +G+ + + E VA+K I +ID + + REI + H NIV+
Sbjct: 24 VKDIGAGNFGVARLMRDKQANELVAVKYIERG--EKID-ENVKREIINHRSLRHPNIVRF 80
Query: 100 KDII-PPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
K++I P + IV E +L + I + ++D ++F QL+ G+ Y H+
Sbjct: 81 KEVILTP------THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM 134
Query: 158 NVLHRDLKPSNLLLNANCD--LKICDFGLARTT-----------------SETDFMTEYV 198
V HRDLK N LL+ + LKI DFG ++ + E EY
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYD 194
Query: 199 VTRWDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFP 258
D G +T+ L+G+ D N R+ + ++ +V Q +
Sbjct: 195 GKVADVWSCG------VTLYVMLVGAYPFEDPE--EPKNFRKTIHRILNV--QYAIPDYV 244
Query: 259 NMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
++SP L R+ V DPAKRI++ E NH +
Sbjct: 245 HISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKIT------NAFDNRIDAKRILRE 84
+ S KY + P+G GA+G V +AV+ E +EV +K I + + ++ E
Sbjct: 21 EYSQKY-STMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLE 79
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFL 144
I +L + H NI+KV DI + + F + + DL I L + Y
Sbjct: 80 IAILSRVEHANIIKVLDI---FENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIF 136
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA 185
QL+ + Y+ +++HRD+K N+++ + +K+ DFG A
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 38/271 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVK 98
++P+G+G +G V A + K +A+K + + + ++ REI++ H+ H NI++
Sbjct: 19 VRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 99 VKDIIPPMDKEKFNDVYIVYELMD----TDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
+ + F+D +Y +++ +L++ ++ + F+ +L L Y
Sbjct: 79 MYNY--------FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 130
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKD 210
H V+HRD+KP NLL+ +LKI DFG + + D L P GK
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIEGKT 188
Query: 211 YVQQLTMITE-------LLGSPD-DSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
+ +++ + L+G P DS ++ RR V P P +S
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSP---SHTETHRRIVNVDLKFP--------PFLSD 237
Query: 263 VAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
+ DL ++L + P +R+ ++ + HP++ +
Sbjct: 238 GSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 121/319 (37%), Gaps = 72/319 (22%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G GA+G V ++ + KI D +A R EI++L H+ +
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAAR--SEIQVLEHLNTTDPNSTFRC 79
Query: 103 IPPMDK-EKFNDVYIVYELMDTDLHQIIRSKQAL--TDDHCQYFLYQLLRGLKYIHSANV 159
+ ++ E + IV+EL+ + I+ L DH + YQ+ + + ++HS +
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL 139
Query: 160 LHRDLKPSNLLLNA-------------------NCDLKICDFGLARTTSETDFMTEYVVT 200
H DLKP N+L N D+K+ DFG A T + + + V
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--TYDDEHHSTLVXX 197
Query: 201 R------------WD-------------------TLFPGKDYVQQLTMITELLGSP---- 225
R W T+FP D + L M+ +LG
Sbjct: 198 RHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHM 257
Query: 226 ----------DDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFD 275
L + +A RYV + P + F DL ++ML +D
Sbjct: 258 IQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK-PLKEFMLSQDVEHERLFDLIQKMLEYD 316
Query: 276 PAKRITVEEALNHPYLSSL 294
PAKRIT+ EAL HP+ L
Sbjct: 317 PAKRITLREALKHPFFDLL 335
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 82
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 142
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R ++ Y
Sbjct: 143 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANSFVGTAQY 197
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 254
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 255 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 32/267 (11%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+P+G+G +G V A + K +A+K + + + ++ REI++ H+ H NI+++
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 100 KDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ D+++ +Y++ E +L++ ++ + F+ +L L Y H
Sbjct: 80 YNYF--HDRKR---IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDYVQQ 214
V+HRD+KP NLL+ +LKI DFG + + D L P GK + ++
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 192
Query: 215 LTMITE-------LLGSPD-DSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
+ + L+G P DS ++ RR V P P +S + D
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDSP---SHTETHRRIVNVDLKFP--------PFLSDGSKD 241
Query: 267 LAERMLVFDPAKRITVEEALNHPYLSS 293
L ++L + P +R+ ++ + HP++ +
Sbjct: 242 LISKLLRYHPPQRLPLKGVMEHPWVKA 268
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 32/267 (11%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+P+G+G +G V A + K +A+K + + + ++ REI++ H+ H NI+++
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 100 KDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ D+++ +Y++ E +L++ ++ + F+ +L L Y H
Sbjct: 81 YNYF--HDRKR---IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDYVQQ 214
V+HRD+KP NLL+ +LKI DFG + + D L P GK + ++
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEK 193
Query: 215 LTMITE-------LLGSPD-DSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
+ + L+G P DS ++ RR V P P +S + D
Sbjct: 194 VDLWCAGVLCYEFLVGMPPFDSP---SHTETHRRIVNVDLKFP--------PFLSDGSKD 242
Query: 267 LAERMLVFDPAKRITVEEALNHPYLSS 293
L ++L + P +R+ ++ + HP++ +
Sbjct: 243 LISKLLRYHPPQRLPLKGVMEHPWVKA 269
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 86
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 146
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R ++ Y
Sbjct: 147 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANSFVGTAQY 201
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 258
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 259 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 124/264 (46%), Gaps = 26/264 (9%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+ +GRG +GIV V + +K+ K + +++ K+ EI +L H NI+ +
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKK---EISILNIARHRNILHLH 67
Query: 101 DIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQ-ALTDDHCQYFLYQLLRGLKYIHSAN 158
+ M+ ++ +++E + D+ + I + L + +++Q+ L+++HS N
Sbjct: 68 ESFESME-----ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 159 VLHRDLKPSNLLLNA--NCDLKICDFGLARTTSETD-----FMT-EYV---VTRWDTLFP 207
+ H D++P N++ + +KI +FG AR D F EY V + D +
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVST 182
Query: 208 GKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
D T++ LL + FL N ++ ++ + + + F +S A+D
Sbjct: 183 ATDMWSLGTLVYVLLSGINP----FLAETN-QQIIENIMNAEYTFDEEAFKEISIEAMDF 237
Query: 268 AERMLVFDPAKRITVEEALNHPYL 291
+R+LV + R+T EAL HP+L
Sbjct: 238 VDRLLVKERKSRMTASEALQHPWL 261
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 49/319 (15%)
Query: 18 GKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRID 77
G ++ N + + ++V+S Q +G G G V N T+E+ A+K + D
Sbjct: 7 GLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKMLQ-------D 53
Query: 78 AKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSKQ 133
+ RE++L + +IV++ D+ + + + IV E +D +L I R Q
Sbjct: 54 CPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQ 112
Query: 134 ALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSE 190
A T+ + + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 113 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG 172
Query: 191 TDFMTEYVVTRWDTLFPGKDYVQQLTMITELLGSPD-DSDLGFLRSDNARRYVKQLPHVP 249
+ + W + M L G P S+ G S + ++ +
Sbjct: 173 EKY--DKSCDMWSL---------GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY-- 219
Query: 250 KQPFSQKFPNMSPVAIDLAERMLV-----FDPAKRITVEEALNHPYLSSLHEINEEPTCP 304
+FPN + +ML+ +P +R+T+ E +NHP++ ++ P P
Sbjct: 220 ------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV---PQTP 270
Query: 305 YPFNFDFEQTSMNEEDIKE 323
+ ++ ED+KE
Sbjct: 271 LHTSRVLKEDKERWEDVKE 289
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 28/265 (10%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L IG+G++G V +++ TKE VAIK I + + + + I +EI +L I +
Sbjct: 24 LDRIGKGSFGEVYKGIDNHTKEVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYITRY 82
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
K ++I+ E + + L + + L ++L+GL Y+HS
Sbjct: 83 FG-----SYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK 137
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLARTTSETD-----------FMTEYVVTRWDTLFPG 208
+HRD+K +N+LL+ D+K+ DFG+A ++T +M V+ + F
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 209 KDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPK-QPFSQKFPNMSPVAIDL 267
+ +T I G P +SDL +R L +PK P + + + P +
Sbjct: 198 DIWSLGITAIELAKGEPPNSDLHPMRV---------LFLIPKNSPPTLEGQHSKPFK-EF 247
Query: 268 AERMLVFDPAKRITVEEALNHPYLS 292
E L DP R T +E L H +++
Sbjct: 248 VEACLNKDPRFRPTAKELLKHKFIT 272
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 82
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 142
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 143 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 197
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 254
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 255 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV--- 99
+G+GA+G V A N+ AIKKI + + IL E+ LL + H+ +V+
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEK---LSTILSEVXLLASLNHQYVVRYYAA 70
Query: 100 ----KDIIPPMDK-EKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYF--LYQLLRGL 151
++ + P +K + ++I E + L+ +I S+ L +Y+ Q+L L
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQILEAL 129
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
YIHS ++HR+LKP N+ ++ + ++KI DFGLA+ +
Sbjct: 130 SYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 83
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 144 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANAFVGTAQY 198
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 255
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 256 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 67
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 127
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 128 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 182
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 239
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 240 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 279
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 83
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 144 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 198
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 255
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 256 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAF---DNRIDAKRILREIKLLCHMTHENIVKV 99
+G G++ V A T E AIK + +N++ + RE ++ + H VK+
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY--VTRERDVMSRLDHPFFVKL 75
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
+K F Y + +L + IR + + +++ +++ L+Y+H +
Sbjct: 76 YFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQ-QLTMI 218
+HRDLKP N+LLN + ++I DFG A+ S E R + YV +L
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQYVSPELLTE 186
Query: 219 TELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
S D LG + R+ N +++ + + F +KF P A DL
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF---FPKARDL 242
Query: 268 AERMLVFDPAKRITVEEALN------HPYLSSL 294
E++LV D KR+ EE HP+ S+
Sbjct: 243 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 275
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 83
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 144 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 198
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 255
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 256 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 85
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 200
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 257
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 258 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 85
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 200
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 257
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 258 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 85
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 200
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 257
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 258 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 132/301 (43%), Gaps = 61/301 (20%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +GRG Y V +N E+ IK + + KR ++ ++ LC NIVK+
Sbjct: 36 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV--KKKKIKREIKILQNLC--GGPNIVKL 91
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
DI+ D+ I + +TD + + LTD +Y++Y+LL+ L Y HS +
Sbjct: 92 LDIV--RDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGI 146
Query: 160 LHRDLKPSNLLLNANC-DLKICDFGLA-----------RTTS-------------ETDF- 193
+HRD+KP N++++ L++ D+GLA R S + D+
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 194 --------MTEYVVTRWDTLFPGKDYVQQLTMITELLGSPD------------DSDLGFL 233
M ++ R + F G D QL I ++LG+ D L L
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 234 RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
++R+ + + Q +SP AID +++L +D +R+T EA+ HPY
Sbjct: 267 VGRHSRKPWLKFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 294 L 294
+
Sbjct: 321 V 321
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+ IG+G + V A + T EVA+K I N +++ RE++++ + H NIVK+
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 101 DIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
++I E +Y+V E ++ + + + + + Q++ ++Y H +
Sbjct: 81 EVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLA 185
+HRDLK NLLL+ + ++KI DFG +
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAF---DNRIDAKRILREIKLLCHMTHENIVKV 99
+G G++ V A T E AIK + +N++ + RE ++ + H VK+
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY--VTRERDVMSRLDHPFFVKL 74
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
+K F Y + +L + IR + + +++ +++ L+Y+H +
Sbjct: 75 YFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQ-QLTMI 218
+HRDLKP N+LLN + ++I DFG A+ S E R + YV +L
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQYVSPELLTE 185
Query: 219 TELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
S D LG + R+ N +++ + + F +KF P A DL
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF---FPKARDL 241
Query: 268 AERMLVFDPAKRITVEEALN------HPYLSSL 294
E++LV D KR+ EE HP+ S+
Sbjct: 242 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 274
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 86
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 146
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 147 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 201
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 258
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 259 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 90
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 91 MSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 150
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 151 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 205
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 262
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 263 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 302
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAF---DNRIDAKRILREIKLLCHMTHENIVKV 99
+G G++ V A T E AIK + +N++ + RE ++ + H VK+
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY--VTRERDVMSRLDHPFFVKL 72
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
+K F Y + +L + IR + + +++ +++ L+Y+H +
Sbjct: 73 YFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQ-QLTMI 218
+HRDLKP N+LLN + ++I DFG A+ S E R + YV +L
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQYVSPELLTE 183
Query: 219 TELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
S D LG + R+ N +++ + + F +KF P A DL
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF---FPKARDL 239
Query: 268 AERMLVFDPAKRITVEEALN------HPYLSSL 294
E++LV D KR+ EE HP+ S+
Sbjct: 240 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 272
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 132/301 (43%), Gaps = 61/301 (20%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +GRG Y V +N E+ IK + + KR ++ ++ LC NIVK+
Sbjct: 36 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV--KKKKIKREIKILQNLC--GGPNIVKL 91
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
DI+ D+ I + +TD + + LTD +Y++Y+LL+ L Y HS +
Sbjct: 92 LDIV--RDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGI 146
Query: 160 LHRDLKPSNLLLNANC-DLKICDFGLA-----------RTTS-------------ETDF- 193
+HRD+KP N++++ L++ D+GLA R S + D+
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 194 --------MTEYVVTRWDTLFPGKDYVQQLTMITELLGSPD------------DSDLGFL 233
M ++ R + F G D QL I ++LG+ D L L
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 234 RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
++R+ + + Q +SP AID +++L +D +R+T EA+ HPY
Sbjct: 267 VGRHSRKPWLKFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 294 L 294
+
Sbjct: 321 V 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 132/301 (43%), Gaps = 61/301 (20%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +GRG Y V +N E+ IK + + KR ++ ++ LC NIVK+
Sbjct: 38 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV--KKKKIKREIKILQNLC--GGPNIVKL 93
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
DI+ D+ I + +TD + + LTD +Y++Y+LL+ L Y HS +
Sbjct: 94 LDIV--RDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGI 148
Query: 160 LHRDLKPSNLLLNANC-DLKICDFGLA-----------RTTS-------------ETDF- 193
+HRD+KP N++++ L++ D+GLA R S + D+
Sbjct: 149 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 208
Query: 194 --------MTEYVVTRWDTLFPGKDYVQQLTMITELLGSPD------------DSDLGFL 233
M ++ R + F G D QL I ++LG+ D L L
Sbjct: 209 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 268
Query: 234 RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
++R+ + + Q +SP AID +++L +D +R+T EA+ HPY
Sbjct: 269 VGRHSRKPWLKFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322
Query: 294 L 294
+
Sbjct: 323 V 323
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAF---DNRIDAKRILREIKLLCHMTHENIVKV 99
+G G++ V A T E AIK + +N++ + RE ++ + H VK+
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY--VTRERDVMSRLDHPFFVKL 73
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
+K F Y + +L + IR + + +++ +++ L+Y+H +
Sbjct: 74 YFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQ-QLTMI 218
+HRDLKP N+LLN + ++I DFG A+ S E R + YV +L
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQYVSPELLTE 184
Query: 219 TELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
S D LG + R+ N +++ + + F +KF P A DL
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF---FPKARDL 240
Query: 268 AERMLVFDPAKRITVEEALN------HPYLSSL 294
E++LV D KR+ EE HP+ S+
Sbjct: 241 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 132/301 (43%), Gaps = 61/301 (20%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +GRG Y V +N E+ IK + + KR ++ ++ LC NIVK+
Sbjct: 37 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV--KKKKIKREIKILQNLC--GGPNIVKL 92
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
DI+ D+ I + +TD + + LTD +Y++Y+LL+ L Y HS +
Sbjct: 93 LDIV--RDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGI 147
Query: 160 LHRDLKPSNLLLNANC-DLKICDFGLA-----------RTTS-------------ETDF- 193
+HRD+KP N++++ L++ D+GLA R S + D+
Sbjct: 148 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 207
Query: 194 --------MTEYVVTRWDTLFPGKDYVQQLTMITELLGSPD------------DSDLGFL 233
M ++ R + F G D QL I ++LG+ D L L
Sbjct: 208 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 267
Query: 234 RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
++R+ + + Q +SP AID +++L +D +R+T EA+ HPY
Sbjct: 268 VGRHSRKPWLKFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
Query: 294 L 294
+
Sbjct: 322 V 322
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 126/301 (41%), Gaps = 61/301 (20%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +GRG Y V +N E+ IK + K L M NIVK+
Sbjct: 36 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLMGGPNIVKL 91
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
DI+ D+ I + +TD + + LTD +Y++Y+LL+ L Y HS +
Sbjct: 92 LDIV--RDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGI 146
Query: 160 LHRDLKPSNLLLNANC-DLKICDFGLA-----------RTTS-------------ETDF- 193
+HRD+KP N++++ L++ D+GLA R S + D+
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 194 --------MTEYVVTRWDTLFPGKDYVQQLTMITELLGSPD------------DSDLGFL 233
M ++ R + F G D QL I ++LG+ D L L
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 234 RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
++R+ + + Q +SP AID +++L +D +R+T EA+ HPY
Sbjct: 267 VGRHSRKPWLKFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 294 L 294
+
Sbjct: 321 V 321
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 141/325 (43%), Gaps = 38/325 (11%)
Query: 17 GGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRI 76
G ++ N + + ++V+S Q +G G G V N T+E+ A+K +
Sbjct: 50 SGLQIKKNAIIDDYKVTS------QVLGLGINGKVLQIFNKRTQEKFALKXLQ------- 96
Query: 77 DAKRILREIKLLCHMTH-ENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII--RSK 132
D + RE++L + +IV++ D+ + + + IV E +D +L I R
Sbjct: 97 DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR-KCLLIVXECLDGGELFSRIQDRGD 155
Query: 133 QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTS 189
QA T+ + ++Y+HS N+ HRD+KP NLL + N LK+ DFG A+ T+
Sbjct: 156 QAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 190 ETDFMTEYVVTRW----DTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNA 238
+ +T T + + L P K + + L G P S+ G S
Sbjct: 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGX 275
Query: 239 RRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEIN 298
+ ++ + P ++ +S L +L +P +R T+ E NHP++ ++
Sbjct: 276 KTRIRXGQYEFPNP---EWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKV- 331
Query: 299 EEPTCPYPFNFDFEQTSMNEEDIKE 323
P P + ++ ED+KE
Sbjct: 332 --PQTPLHTSRVLKEDKERWEDVKE 354
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 119/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 85
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 200
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N ++ + + F +KF
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL-EYDFPEKF-- 257
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 258 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 119/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 85
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 200
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N ++ + + F +KF
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL-EYDFPEKF-- 257
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 258 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 56/283 (19%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 85
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + L + IR + + +++ +++ L
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R ++ Y
Sbjct: 146 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANSFVGTAQY 200
Query: 212 VQQLTMITELLGSPDDSDLGFL--------------RSDNARRYVKQLPHVPKQPFSQKF 257
V ++TE S SDL L R+ N +++ + + F +KF
Sbjct: 201 VSP-ELLTEKSAS-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF 257
Query: 258 PNMSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 258 ---FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 33/274 (12%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G GA+ V T + A+K I + R + + EI +L + HENIV +
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSS--LENEIAVLKKIKHENIVTL 71
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+DI E Y+V +L+ +L I + T+ + Q+L +KY+H
Sbjct: 72 EDIY-----ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG 126
Query: 159 VLHRDLKPSNLLL---NANCDLKICDFGLARTTSETDFMTE-----YVVTRWDTLFPGKD 210
++HRDLKP NLL N + I DFGL++ T YV P
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSK 186
Query: 211 YV--QQLTMITELL--GSPDDSDLGFLRSDNARRY--VKQLPHVPKQPFSQKFPNMSPVA 264
V + +IT +L G P F ++ + +K+ + + PF + ++S A
Sbjct: 187 AVDCWSIGVITYILLCGYPP-----FYEETESKLFEKIKEGYYEFESPF---WDDISESA 238
Query: 265 IDLAERMLVFDPAKRITVEEALNHPYL---SSLH 295
D +L DP +R T E+AL+HP++ ++LH
Sbjct: 239 KDFICHLLEKDPNERYTCEKALSHPWIDGNTALH 272
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 147/351 (41%), Gaps = 98/351 (27%)
Query: 18 GKYVQ--YNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVN-SETKEEVAIKKITNAFDN 74
G ++Q Y I+GNL G G +G V ++ + K +VA+K I N
Sbjct: 46 GDWLQERYEIVGNL--------------GEGTFGKVVECLDHARGKSQVALKIIRNVGKY 91
Query: 75 RIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFN---DVYIVYELMDTDLHQIIRS 131
R +A R+ EI +L + ++ K + + + FN + I +EL+ + + ++
Sbjct: 92 R-EAARL--EINVLKKIKEKD--KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKE 146
Query: 132 K--QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLL-LNA--------------- 173
Q H ++ YQL L+++H + H DLKP N+L +N+
Sbjct: 147 NNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 206
Query: 174 ---NCDLKICDFGLARTTSETDFMTEYVVTR-------------------WD-------- 203
N +++ DFG A T + + T V TR W
Sbjct: 207 SVKNTSIRVADFGSA--TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEY 264
Query: 204 ----TLFPGKDYVQQLTMITELLGSPDDSDL-------------GFLRSDNAR--RYVKQ 244
TLF + + L M+ ++LG P S + G + +N+ RYVK+
Sbjct: 265 YRGFTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE 323
Query: 245 LPHVPKQPFSQKFPNMSPVAI-DLAERMLVFDPAKRITVEEALNHPYLSSL 294
K Q ++ V + DL RML FDPA+RIT+ EAL HP+ + L
Sbjct: 324 NCKPLKSYMLQD--SLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 372
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 147/351 (41%), Gaps = 98/351 (27%)
Query: 18 GKYVQ--YNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVN-SETKEEVAIKKITNAFDN 74
G ++Q Y I+GNL G G +G V ++ + K +VA+K I N
Sbjct: 23 GDWLQERYEIVGNL--------------GEGTFGKVVECLDHARGKSQVALKIIRNVGKY 68
Query: 75 RIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFN---DVYIVYELMDTDLHQIIRS 131
R +A R+ EI +L + ++ K + + + FN + I +EL+ + + ++
Sbjct: 69 R-EAARL--EINVLKKIKEKD--KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKE 123
Query: 132 K--QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLL-LNA--------------- 173
Q H ++ YQL L+++H + H DLKP N+L +N+
Sbjct: 124 NNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 183
Query: 174 ---NCDLKICDFGLARTTSETDFMTEYVVTR-------------------WD-------- 203
N +++ DFG A T + + T V TR W
Sbjct: 184 SVKNTSIRVADFGSA--TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEY 241
Query: 204 ----TLFPGKDYVQQLTMITELLGSPDDSDL-------------GFLRSDNAR--RYVKQ 244
TLF + + L M+ ++LG P S + G + +N+ RYVK+
Sbjct: 242 YRGFTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE 300
Query: 245 LPHVPKQPFSQKFPNMSPVAI-DLAERMLVFDPAKRITVEEALNHPYLSSL 294
K Q ++ V + DL RML FDPA+RIT+ EAL HP+ + L
Sbjct: 301 NCKPLKSYMLQD--SLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 349
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 147/351 (41%), Gaps = 98/351 (27%)
Query: 18 GKYVQ--YNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVN-SETKEEVAIKKITNAFDN 74
G ++Q Y I+GNL G G +G V ++ + K +VA+K I N
Sbjct: 14 GDWLQERYEIVGNL--------------GEGTFGKVVECLDHARGKSQVALKIIRNVGKY 59
Query: 75 RIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFN---DVYIVYELMDTDLHQIIRS 131
R +A R+ EI +L + ++ K + + + FN + I +EL+ + + ++
Sbjct: 60 R-EAARL--EINVLKKIKEKD--KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKE 114
Query: 132 K--QALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLL-LNA--------------- 173
Q H ++ YQL L+++H + H DLKP N+L +N+
Sbjct: 115 NNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174
Query: 174 ---NCDLKICDFGLARTTSETDFMTEYVVTR-------------------WD-------- 203
N +++ DFG A T + + T V TR W
Sbjct: 175 SVKNTSIRVADFGSA--TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEY 232
Query: 204 ----TLFPGKDYVQQLTMITELLGSPDDSDL-------------GFLRSDNAR--RYVKQ 244
TLF + + L M+ ++LG P S + G + +N+ RYVK+
Sbjct: 233 YRGFTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE 291
Query: 245 LPHVPKQPFSQKFPNMSPVAI-DLAERMLVFDPAKRITVEEALNHPYLSSL 294
K Q ++ V + DL RML FDPA+RIT+ EAL HP+ + L
Sbjct: 292 NCKPLKSYMLQD--SLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 52/281 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ A T E AIK + + + I++E K+ + + +D+
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 83
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 144 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 198
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFPN 259
V +L S D LG + R+ N +++ + + F +KF
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-EYDFPEKF-- 255
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 256 -FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 47/241 (19%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NIVK+ DI+ D+ I + +TD + + LTD +Y++Y+LL+ L Y
Sbjct: 108 NIVKLLDIV--RDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYC 162
Query: 155 HSANVLHRDLKPSNLLLNANC-DLKICDFGLA-----------RTTS------------- 189
HS ++HRD+KP N++++ L++ D+GLA R S
Sbjct: 163 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 222
Query: 190 ETDF---------MTEYVVTRWDTLFPGKDYVQQLTMITELLGSPD-DSDLGFLRSDNAR 239
+ D+ M ++ R + F G D QL I ++LG+ ++ L R +
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDP 282
Query: 240 RYVKQLPHVPKQPFSQKFPN------MSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
+ + ++P+ KF N +SP AID +++L +D +R+T EA+ HPY
Sbjct: 283 QLEALVGRHSRKPWL-KFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341
Query: 294 L 294
+
Sbjct: 342 V 342
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 33/180 (18%)
Query: 23 YNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR-- 80
YN L N F++ K IGRG + V A VA+KK+ FD +DAK
Sbjct: 28 YNTLAN-FRIEKK-------IGRGQFSEVYRAACLLDGVPVALKKV-QIFD-LMDAKARA 77
Query: 81 -ILREIKLLCHMTHENIVK-----VKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIR--- 130
++EI LL + H N++K ++D N++ IV EL D DL ++I+
Sbjct: 78 DCIKEIDLLKQLNHPNVIKYYASFIED----------NELNIVLELADAGDLSRMIKHFK 127
Query: 131 -SKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS 189
K+ + + + QL L+++HS V+HRD+KP+N+ + A +K+ D GL R S
Sbjct: 128 KQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAI-KKITNAFDNRIDAKRILREIKLLCHMTHENIVK 98
L IG G+YG C + ++ ++ + K++ + + ++ E+ LL + H NIV+
Sbjct: 11 LYTIGTGSYG-RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQII----RSKQALTDDHCQYFLYQLLRGLKY 153
D I +D+ +YIV E + DL +I + +Q L ++ + QL LK
Sbjct: 70 YYDRI--IDRTN-TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 154 IHSAN-----VLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVT 200
H + VLHRDLKP+N+ L+ ++K+ DFGLAR + + DF E+V T
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGT 179
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 54/282 (19%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G++ V A T E AIK + + + I++E K+ + + +D+
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKIL--------EKRHIIKENKV------PYVTRERDV 88
Query: 103 IPPMDKEKFNDVYIVYE-----------LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ +D F +Y ++ + +L + IR + + +++ +++ L
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 148
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+H ++HRDLKP N+LLN + ++I DFG A+ S E R + Y
Sbjct: 149 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS-----PESKQARANXFVGTAQY 203
Query: 212 VQ-QLTMITELLGSPDDSDLGFL-----------RSDNARRYVKQLPHVPKQPFSQKFP- 258
V +L S D LG + R+ N +++ + FP
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----EYDFPA 258
Query: 259 NMSPVAIDLAERMLVFDPAKRITVEEALN------HPYLSSL 294
P A DL E++LV D KR+ EE HP+ S+
Sbjct: 259 AFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 300
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 125/301 (41%), Gaps = 61/301 (20%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +GRG Y V +N E+ IK + K L NIVK+
Sbjct: 36 VRKVGRGKYSEVFEGINVNNNEKCIIKILKPV----KKKKIKREIKILQNLXGGPNIVKL 91
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
DI+ D+ I + +TD + + LTD +Y++Y+LL+ L Y HS +
Sbjct: 92 LDIV--RDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCHSQGI 146
Query: 160 LHRDLKPSNLLLNANC-DLKICDFGLA-----------RTTS-------------ETDF- 193
+HRD+KP N++++ L++ D+GLA R S + D+
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 194 --------MTEYVVTRWDTLFPGKDYVQQLTMITELLGSPD------------DSDLGFL 233
M ++ R + F G D QL I ++LG+ D L L
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 234 RSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
++R+ + + Q +SP AID +++L +D +R+T EA+ HPY
Sbjct: 267 VGRHSRKPWLKFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
Query: 294 L 294
+
Sbjct: 321 V 321
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 27/264 (10%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+ IG+GA G V +A++ T +EVAI+++ + + I+ EI ++ + NIV
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
D D ++++V E + + ++ + + + L+ L+++HS V
Sbjct: 83 LDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 160 LHRDLKPSNLLLNANCDLKICDFGL-ARTTSETD----------FMTEYVVTRWDTLFPG 208
+HRD+K N+LL + +K+ DFG A+ T E +M VVTR P
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-KAYGPK 196
Query: 209 KDYVQQLTMITELL-GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
D M E++ G P +L + R L P Q +S + D
Sbjct: 197 VDIWSLGIMAIEMIEGEPP-----YLNENPLRALY--LIATNGTPELQNPEKLSAIFRDF 249
Query: 268 AERMLVFDPAKRITVEEALNHPYL 291
R L D KR + +E L H +L
Sbjct: 250 LNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NIVK+ DI+ D+ I + +TD + + LTD +Y++Y+LL+ L Y
Sbjct: 88 NIVKLLDIV--RDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYC 142
Query: 155 HSANVLHRDLKPSNLLLNANC-DLKICDFGLA-----------RTTS------------- 189
HS ++HRD+KP N++++ L++ D+GLA R S
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 190 ETDF---------MTEYVVTRWDTLFPGKDYVQQLTMITELLGSPD------------DS 228
+ D+ M ++ R + F G D QL I ++LG+ D
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 262
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
L L ++R+ + + Q +SP AID +++L +D +R+T EA+ H
Sbjct: 263 QLEALVGRHSRKPWLKFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTH 316
Query: 289 PYLSSL 294
PY +
Sbjct: 317 PYFQQV 322
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 132/317 (41%), Gaps = 76/317 (23%)
Query: 43 IGRGAYGIV--CSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVK 100
+GRG YG V + + ++ A+K+I + + REI LL + H N++ ++
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACREIALLRELKHPNVISLQ 84
Query: 101 DIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQA---------LTDDHCQYFLYQLLRGL 151
+ K V+++++ + DL II+ +A L + LYQ+L G+
Sbjct: 85 KVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 141
Query: 152 KYIHSANVLHRDLKPSNLLLNA----NCDLKICDFGLARTTSET----DFMTEYVVTRW- 202
Y+H+ VLHRDLKP+N+L+ +KI D G AR + + VVT W
Sbjct: 142 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 203 ---DTLFPGKDYVQQL------TMITELLGS---------------PDDSD--------L 230
+ L + Y + + + ELL S P D +
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 261
Query: 231 GFLRSDNARRYVKQLPH---VPKQPFSQKFPNMSPV-------------AIDLAERMLVF 274
GF +D +K++P + K + N S + A L +++L
Sbjct: 262 GF-PADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTM 320
Query: 275 DPAKRITVEEALNHPYL 291
DP KRIT E+A+ PY
Sbjct: 321 DPIKRITSEQAMQDPYF 337
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NIVK+ DI+ D+ I + +TD + + LTD +Y++Y+LL+ L Y
Sbjct: 87 NIVKLLDIV--RDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYC 141
Query: 155 HSANVLHRDLKPSNLLLNANC-DLKICDFGLA-----------RTTS------------- 189
HS ++HRD+KP N++++ L++ D+GLA R S
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 190 ETDF---------MTEYVVTRWDTLFPGKDYVQQLTMITELLGSPD------------DS 228
+ D+ M ++ R + F G D QL I ++LG+ D
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
L L ++R+ + + Q +SP AID +++L +D +R+T EA+ H
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 289 PYLSSL 294
PY +
Sbjct: 316 PYFQQV 321
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 57/246 (23%)
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
NIVK+ DI+ D+ I + +TD + + LTD +Y++Y+LL+ L Y
Sbjct: 87 NIVKLLDIV--RDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYC 141
Query: 155 HSANVLHRDLKPSNLLLNANC-DLKICDFGLA-----------RTTS------------- 189
HS ++HRD+KP N++++ L++ D+GLA R S
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 190 ETDF---------MTEYVVTRWDTLFPGKDYVQQLTMITELLGSPD------------DS 228
+ D+ M ++ R + F G D QL I ++LG+ D
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 229 DLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNH 288
L L ++R+ + + Q +SP AID +++L +D +R+T EA+ H
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 289 PYLSSL 294
PY +
Sbjct: 316 PYFQQV 321
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 39 PLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIV 97
P+Q +GRG +G+V A N AIK+I NR A+ +++RE+K L + H IV
Sbjct: 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAKLEHPGIV 66
Query: 98 K-VKDIIPPMDKEKFN----DVYIVYELM---DTDLHQIIRSKQALTDDH---CQYFLYQ 146
+ + EK VY+ ++ +L + + + + C + Q
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVT 200
+ ++++HS ++HRDLKPSN+ + +K+ DFGL T + D + V+T
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV-TAMDQDEEEQTVLT 179
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G GA+G V A N ET A K I + ++ + EI +L H NIVK+ D
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--EIDILASCDHPNIVKLLDA 102
Query: 103 IPPMDKEKFNDVYIVYELMDTDL--HQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
N+++I+ E ++ ++ LT+ Q Q L L Y+H ++
Sbjct: 103 F-----YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSET 191
HRDLK N+L + D+K+ DFG++ + T
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRT 188
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 27/264 (10%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+ IG+GA G V +A++ T +EVAI+++ + + I+ EI ++ + NIV
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
D D ++++V E + + ++ + + + L+ L+++HS V
Sbjct: 83 LDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 160 LHRDLKPSNLLLNANCDLKICDFGL-ARTTSETD----------FMTEYVVTRWDTLFPG 208
+HRD+K N+LL + +K+ DFG A+ T E +M VVTR P
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR-KAYGPK 196
Query: 209 KDYVQQLTMITELL-GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
D M E++ G P +L + R L P Q +S + D
Sbjct: 197 VDIWSLGIMAIEMIEGEPP-----YLNENPLRALY--LIATNGTPELQNPEKLSAIFRDF 249
Query: 268 AERMLVFDPAKRITVEEALNHPYL 291
R L D KR + +E L H +L
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 27/264 (10%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+ IG+GA G V +A++ T +EVAI+++ + + I+ EI ++ + NIV
Sbjct: 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
D D ++++V E + + ++ + + + L+ L+++HS V
Sbjct: 83 LDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 160 LHRDLKPSNLLLNANCDLKICDFGL-ARTTSETD----------FMTEYVVTRWDTLFPG 208
+HRD+K N+LL + +K+ DFG A+ T E +M VVTR P
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPK 196
Query: 209 KDYVQQLTMITELL-GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
D M E++ G P +L + R L P Q +S + D
Sbjct: 197 VDIWSLGIMAIEMIEGEPP-----YLNENPLRALY--LIATNGTPELQNPEKLSAIFRDF 249
Query: 268 AERMLVFDPAKRITVEEALNHPYL 291
R L D KR + +E L H +L
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G +G V ++ +T E+VAIK+ + + +R EI+++ + H N+V +++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK-NRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 103 IPPMDKEKFNDV-YIVYELMDT-DLHQIIRSKQ---ALTDDHCQYFLYQLLRGLKYIHSA 157
+ K ND+ + E + DL + + + L + + L + L+Y+H
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 158 NVLHRDLKPSNLLLNANCDL---KICDFGLARTTSETDFMTEYVVT 200
++HRDLKP N++L KI D G A+ + + TE+V T
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 186
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G +G V ++ +T E+VAIK+ + + +R EI+++ + H N+V +++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK-NRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 103 IPPMDKEKFNDV-YIVYELMDT-DLHQIIRSKQ---ALTDDHCQYFLYQLLRGLKYIHSA 157
+ K ND+ + E + DL + + + L + + L + L+Y+H
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 158 NVLHRDLKPSNLLLNANCDL---KICDFGLARTTSETDFMTEYVVT 200
++HRDLKP N++L KI D G A+ + + TE+V T
Sbjct: 142 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 187
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHH- 90
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQA------------LTDDHCQYF 143
+ V +++ K + IV +L +RSK+ LT +H +
Sbjct: 91 -LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 144 LYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 22/165 (13%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHH- 92
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQA--------------LTDDHCQ 141
+ V +++ K + IV +L +RSK+ LT +H
Sbjct: 93 -LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 142 YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 152 XYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 27/264 (10%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+ IG+GA G V +A++ T +EVAI+++ + + I+ EI ++ + NIV
Sbjct: 26 FEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNY 83
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
D D ++++V E + + ++ + + + L+ L+++HS V
Sbjct: 84 LDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 160 LHRDLKPSNLLLNANCDLKICDFGL-ARTTSETD----------FMTEYVVTRWDTLFPG 208
+HRD+K N+LL + +K+ DFG A+ T E +M VVTR P
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-KAYGPK 197
Query: 209 KDYVQQLTMITELL-GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
D M E++ G P +L + R L P Q +S + D
Sbjct: 198 VDIWSLGIMAIEMIEGEPP-----YLNENPLRALY--LIATNGTPELQNPEKLSAIFRDF 250
Query: 268 AERMLVFDPAKRITVEEALNHPYL 291
R L D KR + +E + H +L
Sbjct: 251 LNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVKVKD 101
+G G +G V + T +VA+K + +D +I REI+ L H +I+K+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
+I D ++V E + +L I + + + Q+L + Y H V+
Sbjct: 79 VISTP-----TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVV 133
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTE 196
HRDLKP N+LL+A+ + KI DFGL+ S+ +F+ +
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRD 169
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAI-KKITNAFDNRIDAKRILREIKLLCHMTHENIVK 98
L IG G+YG C + ++ ++ + K++ + + ++ E+ LL + H NIV+
Sbjct: 11 LYTIGTGSYG-RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQII----RSKQALTDDHCQYFLYQLLRGLKY 153
D I +D+ +YIV E + DL +I + +Q L ++ + QL LK
Sbjct: 70 YYDRI--IDRTN-TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 154 IHSAN-----VLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVT 200
H + VLHRDLKP+N+ L+ ++K+ DFGLAR + +T F +V T
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGT 179
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVKVKD 101
+G G +G V + T +VA+K + +D +I REI+ L H +I+K+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 102 IIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
+I D ++V E + +L I + + + Q+L + Y H V+
Sbjct: 79 VISTP-----TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVV 133
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSETDFM 194
HRDLKP N+LL+A+ + KI DFGL+ S+ +F+
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 167
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAI-KKITNAFDNRIDAKRILREIKLLCHMTHENIVK 98
L IG G+YG C + ++ ++ + K++ + + ++ E+ LL + H NIV+
Sbjct: 11 LYTIGTGSYG-RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDT-DLHQII----RSKQALTDDHCQYFLYQLLRGLKY 153
D I +D+ +YIV E + DL +I + +Q L ++ + QL LK
Sbjct: 70 YYDRI--IDRTN-TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 154 IHSAN-----VLHRDLKPSNLLLNANCDLKICDFGLARTTS-ETDFMTEYVVT 200
H + VLHRDLKP+N+ L+ ++K+ DFGLAR + +T F +V T
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGT 179
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 123/298 (41%), Gaps = 46/298 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLL--CHMTHENIVKVK 100
+G GA+ V + +N T +E A+K I + R+ RE+++L C H N++++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHI--RSRVFREVEMLYQCQ-GHRNVLELI 77
Query: 101 DIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
+ D+ Y+V+E M + I ++ + + + L ++H+ +
Sbjct: 78 EFFEEEDR-----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 160 LHRDLKPSNLLL---NANCDLKICDFGLART------------------TSETDFMTEYV 198
HRDLKP N+L N +KICDFGL ++M V
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 199 VTRWD---TLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQ 255
V + +++ + + L +I +L S +G SD + P F
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES 252
Query: 256 ------KFPN-----MSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
+FP+ +S A DL ++LV D +R++ + L HP++ N PT
Sbjct: 253 IQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPT 310
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G GA+G V A N ET A K I + ++ + EI +L H NIVK+ D
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--EIDILASCDHPNIVKLLDA 102
Query: 103 IPPMDKEKFNDVYIVYELMDTDL--HQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
N+++I+ E ++ ++ LT+ Q Q L L Y+H ++
Sbjct: 103 F-----YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 161 HRDLKPSNLLLNANCDLKICDFGLA 185
HRDLK N+L + D+K+ DFG++
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G GA+G V A N ET A K I + ++ + EI +L H NIVK+ D
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--EIDILASCDHPNIVKLLDA 102
Query: 103 IPPMDKEKFNDVYIVYELMDTDL--HQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
N+++I+ E ++ ++ LT+ Q Q L L Y+H ++
Sbjct: 103 F-----YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 161 HRDLKPSNLLLNANCDLKICDFGLA 185
HRDLK N+L + D+K+ DFG++
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+GRG++G V + +T + A+KK+ R++ R E+ +T IV +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRA-EELMACAGLTSPRIVPLYGA 153
Query: 103 IPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLH 161
+ + V I EL++ L Q+++ + L +D Y+L Q L GL+Y+HS +LH
Sbjct: 154 V-----REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 162 RDLKPSNLLLNANCD-LKICDFGLA 185
D+K N+LL+++ +CDFG A
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHA 233
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 43 IGRGAYGIVCSAV--NSETKEEV--AIKKITNAF--DNRIDAKRILREIKLLCHMTHENI 96
IG G +G V + S K+EV AIK + + R+D L E ++ +H NI
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD---FLGEAGIMGQFSHHNI 108
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMDTD-LHQIIRSKQA-LTDDHCQYFLYQLLRGLKYI 154
++++ +I K+ + I+ E M+ L + +R K + L + G+KY+
Sbjct: 109 IRLEGVI-----SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ N +HRDL N+L+N+N K+ DFGL+R
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSR 195
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 42/275 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVK---- 98
+G G YG V + +T + AIK + D + K+ + +K H H NI
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH--HRNIATYYGA 89
Query: 99 -VKDIIPPMDKEKFNDVYIVYELMD----TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+K P MD + +++V E TDL + + L ++ Y ++LRGL +
Sbjct: 90 FIKKNPPGMD----DQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSH 144
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLA----RTTSETD-------FMTEYVVT-- 200
+H V+HRD+K N+LL N ++K+ DFG++ RT + +M V+
Sbjct: 145 LHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204
Query: 201 -RWDTLFPGKDYVQQL--TMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQ-K 256
D + K + L T I G+P D+ +R+ L +P+ P + K
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA---------LFLIPRNPAPRLK 255
Query: 257 FPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYL 291
S E LV + ++R E+ + HP++
Sbjct: 256 SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+GRG++G V + +T + A+KK+ R++ R E+ +T IV +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRA-EELMACAGLTSPRIVPLYGA 134
Query: 103 IPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLH 161
+ + V I EL++ L Q+++ + L +D Y+L Q L GL+Y+HS +LH
Sbjct: 135 V-----REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 162 RDLKPSNLLLNANCD-LKICDFGLA 185
D+K N+LL+++ +CDFG A
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHA 214
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 112 EGVV-----TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGLAR
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLAR 195
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 42/223 (18%)
Query: 40 LQPIGRGAYG---IVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENI 96
L+ +G+G++G +V S+ ++ A+K + A D R E +L + H I
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 97 VKVKDIIPPMDKEKFNDVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
VK+ K +Y++ + L DL + + T++ +++L +L L ++H
Sbjct: 89 VKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTT-----------SETDFMTEYVVTR--- 201
S +++RDLKP N+LL+ +K+ DFGL++ + ++M VV R
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 202 -----WDTL-------------FPGKDYVQQLTMITEL-LGSP 225
W + F GKD + +TMI + LG P
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 41 QPIGRGAYGIVCSA-VNSETKEE--VAIKKITNAFDNRIDAKRILREIKLLCHMTHENIV 97
Q IG G +G VCS + K E VAIK + + + + + L E ++ H N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK-QRRDFLSEASIMGQFDHPNVI 97
Query: 98 KVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIH 155
++ ++ K V I+ E M+ L +R T L + G+KY+
Sbjct: 98 HLEGVV-----TKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N+L+N+N K+ DFGL+R
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSR 183
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIV--CS--AVNSETKEEVAIKKITNAFDNRIDAKRILR 83
N+ Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + R
Sbjct: 21 NMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFER 78
Query: 84 EIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYF 143
EI++L + H+NIVK K + + ++ ++ E + + K DH +
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 135
Query: 144 LY--QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Y Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 42/223 (18%)
Query: 40 LQPIGRGAYG---IVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENI 96
L+ +G+G++G +V S+ ++ A+K + A D R E +L + H I
Sbjct: 30 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 89
Query: 97 VKVKDIIPPMDKEKFNDVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
VK+ K +Y++ + L DL + + T++ +++L +L L ++H
Sbjct: 90 VKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 144
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTT-----------SETDFMTEYVVTR--- 201
S +++RDLKP N+LL+ +K+ DFGL++ + ++M VV R
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 202 -----WDTL-------------FPGKDYVQQLTMITEL-LGSP 225
W + F GKD + +TMI + LG P
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIV--CS--AVNSETKEEVAIKKITNAFDNRIDAKRILR 83
N+ Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + R
Sbjct: 21 NMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFER 78
Query: 84 EIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYF 143
EI++L + H+NIVK K + + ++ ++ E + + K DH +
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 135
Query: 144 LY--QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Y Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 30/170 (17%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 82
Query: 95 NIVKV-----KDIIPPMDKEKF-------------NDVYIVYELMDTDLHQIIRSKQALT 136
N+V + K P M +F + ++ Y++ DL+ K LT
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY-----KDFLT 137
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 30/170 (17%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 82
Query: 95 NIVKV-----KDIIPPMDKEKF-------------NDVYIVYELMDTDLHQIIRSKQALT 136
N+V + K P M +F + ++ Y++ DL+ K LT
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY-----KDFLT 137
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 42/223 (18%)
Query: 40 LQPIGRGAYG---IVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENI 96
L+ +G+G++G +V S+ ++ A+K + A D R E +L + H I
Sbjct: 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 97 VKVKDIIPPMDKEKFNDVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
VK+ K +Y++ + L DL + + T++ +++L +L L ++H
Sbjct: 89 VKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTT-----------SETDFMTEYVVTR--- 201
S +++RDLKP N+LL+ +K+ DFGL++ + ++M VV R
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 202 -----WDTL-------------FPGKDYVQQLTMITEL-LGSP 225
W + F GKD + +TMI + LG P
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 112 EGVV-----TKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL+R
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 30/170 (17%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 82
Query: 95 NIVKV-----KDIIPPMDKEKF-------------NDVYIVYELMDTDLHQIIRSKQALT 136
N+V + K P M +F + ++ Y++ DL+ K LT
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY-----KDFLT 137
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 27/264 (10%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+ IG+GA G V +A++ T +EVAI+++ + + I+ EI ++ + NIV
Sbjct: 26 FEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPNIVNY 83
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
D D ++++V E + + ++ + + + L+ L+++HS V
Sbjct: 84 LDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 160 LHRDLKPSNLLLNANCDLKICDFGL-ARTTSETD----------FMTEYVVTRWDTLFPG 208
+HR++K N+LL + +K+ DFG A+ T E +M VVTR P
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPK 197
Query: 209 KDYVQQLTMITELL-GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
D M E++ G P +L + R L P Q +S + D
Sbjct: 198 VDIWSLGIMAIEMIEGEPP-----YLNENPLRALY--LIATNGTPELQNPEKLSAIFRDF 250
Query: 268 AERMLVFDPAKRITVEEALNHPYL 291
R L D KR + +E + H +L
Sbjct: 251 LNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 34 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHH- 91
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQA---------------LTDDHC 140
+ V +++ K + IV +L +RSK+ LT +H
Sbjct: 92 -LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 141 QYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 30/170 (17%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 82
Query: 95 NIVKV-----KDIIPPM---DKEKFNDV----------YIVYELMDTDLHQIIRSKQALT 136
N+V + K P M + KF ++ ++ Y++ DL+ K LT
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY-----KDFLT 137
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 30/170 (17%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 128
Query: 95 NIVKV-----KDIIPPM---DKEKFNDV----------YIVYELMDTDLHQIIRSKQALT 136
N+V + K P M + KF ++ ++ Y++ DL+ K LT
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY-----KDFLT 183
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 26 LGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREI 85
LG+ + ++ K + LQ IG+G +G V + +VA+K I N A+ L E
Sbjct: 3 LGSGWALNMKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKN----DATAQAFLAEA 56
Query: 86 KLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSK--QALTDDHCQY 142
++ + H N+V++ +I E+ +YIV E M L +RS+ L D
Sbjct: 57 SVMTQLRHSNLVQLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 112
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
F + ++Y+ N +HRDL N+L++ + K+ DFGL + S T
Sbjct: 113 FSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 161
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 30/170 (17%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 91
Query: 95 NIVKV-----KDIIPPM---DKEKFNDV----------YIVYELMDTDLHQIIRSKQALT 136
N+V + K P M + KF ++ ++ Y++ DL+ K LT
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY-----KDFLT 146
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 30/170 (17%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 91
Query: 95 NIVKV-----KDIIPPM---DKEKFNDV----------YIVYELMDTDLHQIIRSKQALT 136
N+V + K P M + KF ++ ++ Y++ DL+ K LT
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY-----KDFLT 146
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 30/170 (17%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 91
Query: 95 NIVKV-----KDIIPPM---DKEKFNDV----------YIVYELMDTDLHQIIRSKQALT 136
N+V + K P M + KF ++ ++ Y++ DL+ K LT
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY-----KDFLT 146
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 24/167 (14%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHH- 92
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQA----------------LTDDH 139
+ V +++ K + IV +L +RSK+ LT +H
Sbjct: 93 -LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 140 CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 112 EGVV-----TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL+R
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 6 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E M+ DL I + AL ++ +
Sbjct: 64 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERMEPVQDLFDFITERGALQEELARS 118
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 173
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 112 EGVV-----TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL+R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 112 EGVV-----TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGR 195
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 112 EGVV-----TKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL+R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 99
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 100 EGVV-----TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL+R
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSR 183
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT-NAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ IG+G++G VC ++TK+ A+K + R + + + +E++++ + H +V
Sbjct: 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN 79
Query: 99 VKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSA 157
+ D+E D+++V +L+ DL ++ ++ + F+ +L+ L Y+ +
Sbjct: 80 L--WYSFQDEE---DMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLA 185
++HRD+KP N+LL+ + + I DF +A
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIA 162
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 109
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 110 EGVV-----TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL+R
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSR 193
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 112 EGVV-----TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL+R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 112 EGVV-----TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL+R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 82
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 83 EGVVT-----KSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL+R
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSR 166
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 111
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 112 EGVV-----TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL+R
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E M D+ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +K+ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG GA +V +A + KE+VAIK+I N + +L+EI+ + H NIV
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 103 IPPMDKEKFNDVYIVYELM------DTDLHQIIRSKQ---ALTDDHCQYFLYQLLRGLKY 153
D ++++V +L+ D H + + + L + L ++L GL+Y
Sbjct: 82 FVVKD-----ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 136
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLA 185
+H +HRD+K N+LL + ++I DFG++
Sbjct: 137 LHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 31 QVSSKYVPPLQPIGRGAYGIVCSA-VNSETKEE--VAIKKITNAFDNRIDAKRILREIKL 87
++ YV + IG G +G VC + + K+E VAIK + + R + L E +
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER-QRREFLSEASI 70
Query: 88 LCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTD-LHQIIR-SKQALTDDHCQYFLY 145
+ H NI++++ ++ V I+ E M+ L +R + T L
Sbjct: 71 MGQFEHPNIIRLEGVV-----TNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 125
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR-------TTSETDFMTEYV 198
+ G++Y+ + +HRDL N+L+N+N K+ DFGL+R +ET + +
Sbjct: 126 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
Query: 199 VTRW 202
RW
Sbjct: 186 PIRW 189
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G VCS + S+ + VAIK + + + + L E ++ H NI+++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIRL 82
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V IV E M+ L +R A T L + G+KY+
Sbjct: 83 EGVVT-----KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+N+N K+ DFGL+R
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSR 166
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E M D+ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +K+ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 116/265 (43%), Gaps = 30/265 (11%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IG+G++G V +++ T++ VAIK I + + + + I +EI +L + K
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSSYVTKY 86
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
K + ++I+ E + + + L ++L+GL Y+HS
Sbjct: 87 YG-----SYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQ----- 214
+HRD+K +N+LL+ D+K+ DFG+A ++T V + P + +QQ
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP--EVIQQSAYDS 199
Query: 215 --------LTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
+T I G P +SD+ +R L +PK + + +
Sbjct: 200 KADIWSLGITAIELAKGEPPNSDMHPMRV---------LFLIPKNNPPTLVGDFTKSFKE 250
Query: 267 LAERMLVFDPAKRITVEEALNHPYL 291
+ L DP+ R T +E L H ++
Sbjct: 251 FIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 41 QP-IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
QP +GRG++G V + +T + A+KK+ R++ R+ E+ ++ IV +
Sbjct: 79 QPRVGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRV-EELVACAGLSSPRIVPL 131
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ + V I EL++ L Q+I+ L +D Y+L Q L GL+Y+H+
Sbjct: 132 YGAV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR 186
Query: 159 VLHRDLKPSNLLLNANCD-LKICDFGLA 185
+LH D+K N+LL+++ +CDFG A
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 41 QP-IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
QP +GRG++G V + +T + A+KK+ R++ R+ E+ ++ IV +
Sbjct: 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRV-EELVACAGLSSPRIVPL 115
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ + V I EL++ L Q+I+ L +D Y+L Q L GL+Y+H+
Sbjct: 116 YGAV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR 170
Query: 159 VLHRDLKPSNLLLNANCD-LKICDFGLA 185
+LH D+K N+LL+++ +CDFG A
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IG GA +V +A + KE+VAIK+I N + +L+EI+ + H NIV
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 103 IPPMDKEKFNDVYIVYELM------DTDLHQIIRSKQ---ALTDDHCQYFLYQLLRGLKY 153
D ++++V +L+ D H + + + L + L ++L GL+Y
Sbjct: 77 FVVKD-----ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 131
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLA 185
+H +HRD+K N+LL + ++I DFG++
Sbjct: 132 LHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 49/294 (16%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L IGRGAYG V V+ + + +A+K+I + D + + K++L ++ ++ M + +
Sbjct: 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK-EQKQLLMDLDVV--MRSSDCPYI 83
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHC-----QYFLYQLLRGLKYI 154
+ +E D +I ELM T + + ++ DD ++ L ++
Sbjct: 84 VQFYGALFRE--GDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 155 -HSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQ 213
+ ++HRD+KPSN+LL+ + ++K+CDFG++ D++ +D
Sbjct: 142 KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-------------DSIAKTRDAGC 188
Query: 214 QLTMITELLGSPDDSDLGF-LRSD-------------------NARRYVKQLPHV----P 249
+ M E + P S G+ +RSD QL V P
Sbjct: 189 RPYMAPERI-DPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDP 247
Query: 250 KQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPTC 303
Q + + SP I+ L D +KR +E L HP++ E E C
Sbjct: 248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVAC 301
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 41 QP-IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
QP +GRG++G V + +T + A+KK+ R++ R+ E+ ++ IV +
Sbjct: 77 QPRLGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFRV-EELVACAGLSSPRIVPL 129
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ + V I EL++ L Q+I+ L +D Y+L Q L GL+Y+H+
Sbjct: 130 YGAV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR 184
Query: 159 VLHRDLKPSNLLLNANCD-LKICDFGLA 185
+LH D+K N+LL+++ +CDFG A
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHA 212
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 41 QPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHS-EHRALMSELKILIHIGHH- 90
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQA------------LTDDHCQYF 143
+ V +++ K + IV +L +RSK+ LT +H +
Sbjct: 91 -LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 144 LYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+Q+ +G++++ S +HRDL N+LL+ +KI DFGLAR
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 117/272 (43%), Gaps = 34/272 (12%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHM-THENIVK 98
L+ +G G++G V + A+K + R+ + +L+ + TH I++
Sbjct: 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIR 70
Query: 99 VKDIIPPMDKEKFNDVYIVYELMD----TDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
+ F D ++ +MD +L ++R Q + +++ ++ L+Y+
Sbjct: 71 MWGT--------FQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYL 122
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT----EYVVTRWDTLFP--- 207
HS ++++RDLKP N+LL+ N +KI DFG A+ + + +Y+ + P
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNK 182
Query: 208 GKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDL 267
D+ +I E+L F S+ + Y K L + P P + DL
Sbjct: 183 SIDWWSFGILIYEMLAGYTP----FYDSNTMKTYEKILNAELRFP-----PFFNEDVKDL 233
Query: 268 AERMLVFDPAKRI-----TVEEALNHPYLSSL 294
R++ D ++R+ E+ NHP+ +
Sbjct: 234 LSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 26/170 (15%)
Query: 43 IGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIV 97
+G GA+G V A + K VA+K + +A DN K RE +LL ++ HE+IV
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA--RKDFHREAELLTNLQHEHIV 78
Query: 98 KVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSK-------------QALTDDHCQYF 143
K + D + +V+E M DL++ +R+ LT +
Sbjct: 79 KFYGVCVEGDP-----LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 144 LYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
Q+ G+ Y+ S + +HRDL N L+ N +KI DFG++R TD+
Sbjct: 134 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY 183
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 63
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 94
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGR---RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 152 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 194
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 68
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 125
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 126 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 168
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIVCSA-VNSETKEE--VAIKKITNAFDNRIDAKRILREIKL 87
++ YV + IG G +G VC + + K+E VAIK + + R + L E +
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER-QRREFLSEASI 68
Query: 88 LCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTD-LHQIIR-SKQALTDDHCQYFLY 145
+ H NI++++ ++ V I+ E M+ L +R + T L
Sbjct: 69 MGQFEHPNIIRLEGVV-----TNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR 123
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
+ G++Y+ + +HRDL N+L+N+N K+ DFGL+R E
Sbjct: 124 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 168
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 66
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + A DH + Y
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYT 123
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 66
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 123
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 12 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 69
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 126
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 127 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 169
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 70
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 127
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 128 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 170
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 28/289 (9%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+ V+ Y Q +G G G V + T ++ A+K + D+ + +E+
Sbjct: 24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL-------YDSPKARQEVDHHW 76
Query: 90 HMTHE-NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQII--RSKQALTDDHCQYFLYQ 146
+ +IV + D+ M K + I+ + +L I R QA T+ +
Sbjct: 77 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 136
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTS----ETDFMTEYVV 199
+ ++++HS N+ HRD+KP NLL + + LK+ DFG A+ T+ +T T Y V
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYV 196
Query: 200 TRWDTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNARRYVKQLPHVPKQP 252
+ L P K + + M L G P S+ G S +R ++ + P
Sbjct: 197 AP-EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255
Query: 253 FSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEP 301
++ +S A L +L DP +R+T+ + +NHP+++ + + P
Sbjct: 256 ---EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTP 301
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT-NAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ IG G++G V A + E VAIKK++ + + + I++E++ L + H N ++
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 99 VKDIIPPMDKEKFNDVYIVYEL---MDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + + ++V E +DL ++ K+ L + + L+GL Y+H
Sbjct: 119 YRGCY-----LREHTAWLVMEYCLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLA 185
S N++HRD+K N+LL+ +K+ DFG A
Sbjct: 172 SHNMIHRDVKAGNILLSEPGLVKLGDFGSA 201
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 63
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--CS--AVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 63
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 121 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 67
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 124
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 125 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 167
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 61
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 118
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 119 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 161
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 28/289 (9%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+ V+ Y Q +G G G V + T ++ A+K + D+ + +E+
Sbjct: 5 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL-------YDSPKARQEVDHHW 57
Query: 90 HMTHE-NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQII--RSKQALTDDHCQYFLYQ 146
+ +IV + D+ M K + I+ + +L I R QA T+ +
Sbjct: 58 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 117
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTS----ETDFMTEYVV 199
+ ++++HS N+ HRD+KP NLL + + LK+ DFG A+ T+ +T T Y V
Sbjct: 118 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYV 177
Query: 200 TRWDTLFPGK------DYVQQLTMITELLGSPD-DSDLGFLRSDNARRYVKQLPHVPKQP 252
+ L P K + + M L G P S+ G S +R ++ + P
Sbjct: 178 AP-EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 236
Query: 253 FSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEP 301
++ +S A L +L DP +R+T+ + +NHP+++ + + P
Sbjct: 237 ---EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTP 282
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G + ET E + +K++ FD + L+E+K++ + H N++K +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIR-FDEETQ-RTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQY-------FLYQLLRGLKYIH 155
+ + F YI L II+S + QY F + G+ Y+H
Sbjct: 76 LYKDKRLNFITEYI----KGGTLRGIIKSMDS------QYPWSQRVSFAKDIASGMAYLH 125
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
S N++HRDL N L+ N ++ + DFGLAR
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLAR 156
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--CS--AVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 62
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 119
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 120 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 162
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVK- 98
L+ IG+G++G V +++ T++ VAIK I + + + + I +EI +L + K
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 85
Query: 99 ----VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
+KD ++I+ E + + L + L ++L+GL Y+
Sbjct: 86 YGSYLKD----------TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYL 135
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
HS +HRD+K +N+LL+ + ++K+ DFG+A ++T
Sbjct: 136 HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVK- 98
L+ IG+G++G V +++ T++ VAIK I + + + + I +EI +L + K
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 90
Query: 99 ----VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
+KD ++I+ E + + L + L ++L+GL Y+
Sbjct: 91 YGSYLKD----------TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYL 140
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
HS +HRD+K +N+LL+ + ++K+ DFG+A ++T
Sbjct: 141 HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 177
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVK- 98
L+ IG+G++G V +++ T++ VAIK I + + + + I +EI +L + K
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 99 ----VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
+KD ++I+ E + + L + L ++L+GL Y+
Sbjct: 71 YGSYLKD----------TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYL 120
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
HS +HRD+K +N+LL+ + ++K+ DFG+A ++T
Sbjct: 121 HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVK- 98
L+ IG+G++G V +++ T++ VAIK I + + + + I +EI +L + K
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 99 ----VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
+KD ++I+ E + + L + L ++L+GL Y+
Sbjct: 71 YGSYLKD----------TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYL 120
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
HS +HRD+K +N+LL+ + ++K+ DFG+A ++T
Sbjct: 121 HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 46/298 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLL--CHMTHENIVKVK 100
+G GA+ V + +N T +E A+K I + R+ RE+++L C H N++++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHI--RSRVFREVEMLYQCQ-GHRNVLELI 77
Query: 101 DIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
+ D+ Y+V+E M + I ++ + + + L ++H+ +
Sbjct: 78 EFFEEEDR-----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 160 LHRDLKPSNLLL---NANCDLKICDFGLART------------------TSETDFMTEYV 198
HRDLKP N+L N +KICDF L ++M V
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 199 VTRWD---TLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQ 255
V + +++ + + L +I +L S +G SD + P F
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES 252
Query: 256 ------KFPN-----MSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
+FP+ +S A DL ++LV D +R++ + L HP++ N PT
Sbjct: 253 IQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPT 310
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT-NAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ IG G++G V A + E VAIKK++ + + + I++E++ L + H N ++
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 99 VKDIIPPMDKEKFNDVYIVYEL---MDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+ + + ++V E +DL ++ K+ L + + L+GL Y+H
Sbjct: 80 YRGCYL-----REHTAWLVMEYCLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLA 185
S N++HRD+K N+LL+ +K+ DFG A
Sbjct: 133 SHNMIHRDVKAGNILLSEPGLVKLGDFGSA 162
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--CS--AVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ L+ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 66
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGR---RNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYT 123
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HRDL N+L+ +KI DFGL +
Sbjct: 124 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 23/195 (11%)
Query: 8 MKDRGIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKK 67
M D IP Y Q + G+ + + + IG G++G V A +VA+K
Sbjct: 10 MSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGSDVAVKI 67
Query: 68 ITNAFDNRIDAKRI---LREIKLLCHMTHENIVKVKDII--PPMDKEKFNDVYIVYE-LM 121
+ + A+R+ LRE+ ++ + H NIV + PP ++ IV E L
Sbjct: 68 L---MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP-------NLSIVTEYLS 117
Query: 122 DTDLHQIIR---SKQALTDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNANCD 176
L++++ +++ L + Y + +G+ Y+H+ N ++HR+LK NLL++
Sbjct: 118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYT 177
Query: 177 LKICDFGLARTTSET 191
+K+CDFGL+R + T
Sbjct: 178 VKVCDFGLSRLKAST 192
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 40 LQPIGRGAYG---IVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENI 96
L+ +G+G++G +V ++ A+K + A D R E +L + H +
Sbjct: 33 LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFV 92
Query: 97 VKVKDIIPPMDKEKFNDVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
VK+ K +Y++ + L DL + + T++ +++L +L GL ++H
Sbjct: 93 VKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
S +++RDLKP N+LL+ +K+ DFGL++
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 178
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCH-MTHENIVKVKD 101
+G GAY V AV+ + +E A+K I + R+ RE++ L ++NI+++ +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGH--SRSRVFREVETLYQCQGNKNILELIE 78
Query: 102 IIPPMDKEKFNDVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVL 160
D +F Y+V+E L + I+ ++ + + + L ++H+ +
Sbjct: 79 FFE--DDTRF---YLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIA 133
Query: 161 HRDLKPSNLLLNAN---CDLKICDFGLAR-----------TTSE-------TDFMTEYVV 199
HRDLKP N+L + +KICDF L TT E ++M VV
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 200 ---TRWDTLFPGKDYVQQLTMITELL--GSPD-----DSDLGFLRSDNARRYVKQL---P 246
T T + + + L ++ ++ G P +D G+ R + R +L
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI 253
Query: 247 HVPKQPFSQK-FPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
K F K + ++S A DL ++LV D +R++ + L HP++
Sbjct: 254 QEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
Query: 41 QPIGRGAYGIVCSA-VNSETKEE--VAIKKITNAFDNRIDAKRILREIKLLCHMTHENIV 97
Q IG G +G VCS + K E VAIK + + + + + L E ++ H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK-QRRDFLSEASIMGQFDHPNVI 71
Query: 98 KVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIH 155
++ ++ K V I+ E M+ L +R T L + G+KY+
Sbjct: 72 HLEGVV-----TKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 126
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HR L N+L+N+N K+ DFGL+R
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSR 157
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 23/190 (12%)
Query: 8 MKDRGIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKK 67
M D IP Y Q + G+ + + + IG G++G V A +VA+K
Sbjct: 10 MSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGSDVAVKI 67
Query: 68 ITNAFDNRIDAKRI---LREIKLLCHMTHENIVKVKDII--PPMDKEKFNDVYIVYE-LM 121
+ + A+R+ LRE+ ++ + H NIV + PP ++ IV E L
Sbjct: 68 L---MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP-------NLSIVTEYLS 117
Query: 122 DTDLHQIIR---SKQALTDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNANCD 176
L++++ +++ L + Y + +G+ Y+H+ N ++HRDLK NLL++
Sbjct: 118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYT 177
Query: 177 LKICDFGLAR 186
+K+CDFGL+R
Sbjct: 178 VKVCDFGLSR 187
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 46 GAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPP 105
G +G V A N ET A K I + ++ + EI +L H NIVK+ D
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--EIDILASCDHPNIVKLLDAF-- 76
Query: 106 MDKEKFNDVYIVYELMDTDL--HQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRD 163
N+++I+ E ++ ++ LT+ Q Q L L Y+H ++HRD
Sbjct: 77 ---YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRD 133
Query: 164 LKPSNLLLNANCDLKICDFGLARTTSET 191
LK N+L + D+K+ DFG++ + T
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSAKNTRT 161
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+ ++ K + LQ IG+G +G V + +VA+K I N A+ L E ++
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN----DATAQAFLAEASVMT 69
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSK--QALTDDHCQYFLYQ 146
+ H N+V++ +I E+ +YIV E M L +RS+ L D F
Sbjct: 70 QLRHSNLVQLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 125
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
+ ++Y+ N +HRDL N+L++ + K+ DFGL + S T
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 31 QVSSKYVPPLQPIGRGAYGIV--CS--AVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
Q +++ LQ +G+G +G V C + T E VA+KK+ ++ + + + REI+
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL--RDFEREIE 64
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY- 145
+L + H+NIVK K + + ++ ++ E + + K DH + Y
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRR---NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 121
Query: 146 -QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Q+ +G++Y+ + +HR+L N+L+ +KI DFGL +
Sbjct: 122 SQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKV 164
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 7 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 65 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 174
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 43 IGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG+G +G+V ++ + + AIK ++ + + + LRE L+ + H N++ +
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ-QVEAFLREGLLMRGLNHPNVLAL 87
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSAN 158
I+ P E V + Y + DL Q IRS Q T F Q+ RG++Y+
Sbjct: 88 IGIMLP--PEGLPHVLLPY-MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT 195
+HRDL N +L+ + +K+ DFGLAR + ++ +
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 46/277 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G GA+G V A N ET A K I + ++ + EI++L H IVK+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE--DYIVEIEILATCDHPYIVKLLGA 84
Query: 103 IPPMDKEKFND--VYIVYEL-----MDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
++D ++I+ E +D + ++ R LT+ Q Q+L L ++H
Sbjct: 85 Y-------YHDGKLWIMIEFCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLH 134
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLA----RTTSETD-------FMTEYVV---TR 201
S ++HRDLK N+L+ D+++ DFG++ +T + D +M VV T
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 202 WDTLFPGKDYVQQL--TMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQP--FSQKF 257
DT + K + L T+I P +L +R + K P P +S +F
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLKIAKSDPPTLLTPSKWSVEF 252
Query: 258 PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
+ +A+D +P R + + L HP++SS+
Sbjct: 253 RDFLKIALDK-------NPETRPSAAQLLEHPFVSSI 282
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 46/277 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G GA+G V A N ET A K I + ++ + EI++L H IVK+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE--DYIVEIEILATCDHPYIVKLLGA 76
Query: 103 IPPMDKEKFND--VYIVYEL-----MDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
++D ++I+ E +D + ++ R LT+ Q Q+L L ++H
Sbjct: 77 Y-------YHDGKLWIMIEFCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLH 126
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLA----RTTSETD-------FMTEYVV---TR 201
S ++HRDLK N+L+ D+++ DFG++ +T + D +M VV T
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 202 WDTLFPGKDYVQQL--TMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQP--FSQKF 257
DT + K + L T+I P +L +R + K P P +S +F
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--LLKIAKSDPPTLLTPSKWSVEF 244
Query: 258 PNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
+ +A+D +P R + + L HP++SS+
Sbjct: 245 RDFLKIALDK-------NPETRPSAAQLLEHPFVSSI 274
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 29 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 87 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 141
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 142 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 196
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+ ++ K + LQ IG+G +G V + +VA+K I N A+ L E ++
Sbjct: 1 WALNMKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKN----DATAQAFLAEASVMT 54
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSK--QALTDDHCQYFLYQ 146
+ H N+V++ +I E+ +YIV E M L +RS+ L D F
Sbjct: 55 QLRHSNLVQLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 110
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
+ ++Y+ N +HRDL N+L++ + K+ DFGL + S T
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 7 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 65 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 174
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 7 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 65 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 119
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 174
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 41 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 99 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 153
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 154 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 208
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 34 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 92 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 201
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+ ++ K + LQ IG+G +G V + +VA+K I N A+ L E ++
Sbjct: 188 WALNMKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCI----KNDATAQAFLAEASVMT 241
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSK--QALTDDHCQYFLYQ 146
+ H N+V++ +I E+ +YIV E M L +RS+ L D F
Sbjct: 242 QLRHSNLVQLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 297
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
+ ++Y+ N +HRDL N+L++ + K+ DFGL + S T
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 49 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 107 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 161
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 216
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 35 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 93 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 202
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 34 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 92 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 201
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 6 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 64 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 118
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 173
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 22 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 80 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 189
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 54 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 112 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 166
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 167 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 221
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 5 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 63 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 117
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 118 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 172
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 34 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 92 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 201
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K + D +++++ +K + H +E ++
Sbjct: 47 IRTLGTGSFGRVMLVKHKETGNHYAMKIL--------DKQKVVK-LKQIEHTLNEKRIQQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E ++ +R ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +K+ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 35 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 93 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 202
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 21 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 79 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 133
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 188
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 35 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 93 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 202
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 22 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 80 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 189
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 2 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 59
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 60 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 115 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 169
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 21 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 79 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 133
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 188
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 2 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 59
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 60 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 115 FFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 169
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 34 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 92 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 201
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 35 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 93 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 202
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 49 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 107 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 161
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 216
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 2 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 59
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 60 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 114
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 115 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 169
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 32 VSSKY-VPPLQPIGRGAYGIVCSAVNSETKEEVAIKKI----TNAFDNRIDAKRILREIK 86
+ S+Y V PL +G G +G V S + VAIK + + + + R+ E+
Sbjct: 22 LESQYQVGPL--LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 87 LLCHMTH--ENIVKVKDIIPPMDKEKFNDVYIVYELMD--TDLHQIIRSKQALTDDHCQY 142
LL ++ ++++ D E+ + ++ E + DL I + AL ++ +
Sbjct: 80 LLKKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDFG---LARTTSETDF 193
F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DFG L + T TDF
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 189
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +K+ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 43 IGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G G +G V A N TK VA+K + + + L E ++ + H+ +VK+
Sbjct: 23 LGAGQFGEVWMATYNKHTK--VAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKLHA 77
Query: 102 IIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQY--FLYQLLRGLKYIHSAN 158
++ KE +YI+ E M L ++S + + F Q+ G+ +I N
Sbjct: 78 VV---TKE---PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 131
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRDL+ +N+L++A+ KI DFGLAR + ++
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 166
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 53/208 (25%)
Query: 43 IGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHM-THENI 96
+G GA+G V +A + +VA+K + D+ + + ++ E+K++ + +HENI
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS-EREALMSELKMMTQLGSHENI 111
Query: 97 VKVKDIIPPMDKEKFNDVYIVYE-LMDTDLHQIIRSK-QALTDDHCQY------------ 142
V + +Y+++E DL +RSK + ++D +Y
Sbjct: 112 VNLLGACTLS-----GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 143 ----------FLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
F YQ+ +G++++ + +HRDL N+L+ +KICDFGLAR D
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR-----D 221
Query: 193 FMTE--YVV-------TRW---DTLFPG 208
M++ YVV +W ++LF G
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEG 249
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G VCS V + + VAIK + + ++ + L E ++ H NI+ +
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNIIHL 95
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V I+ E M+ L +R T L + G+KY+
Sbjct: 96 EGVV-----TKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 150
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLART 187
+ +HRDL N+L+N+N K+ DFG++R
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRV 180
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 130/278 (46%), Gaps = 18/278 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIK-LLCHMTHENIV 97
L+ IG+G++G V A + + A+K + A + + K I+ E LL ++ H +V
Sbjct: 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLV 102
Query: 98 KVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
+ DK +Y V + ++ +L ++ ++ + +++ ++ L Y+HS
Sbjct: 103 GLHFSFQTADK-----LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS 157
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQL- 215
N+++RDLKP N+LL++ + + DFGL + E + T + L P + Q
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYD 217
Query: 216 -TMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVF 274
T+ LG+ L L +R + ++ +P K PN++ A L E +L
Sbjct: 218 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK-PNITNSARHLLEGLLQK 276
Query: 275 DPAKRITVE----EALNHPYLSSLHE---INEEPTCPY 305
D KR+ + E +H + S ++ IN++ T P+
Sbjct: 277 DRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPF 314
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 43 IGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G G +G V A N TK VA+K + + + L E ++ + H+ +VK+
Sbjct: 196 LGAGQFGEVWMATYNKHTK--VAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKLHA 250
Query: 102 IIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQY--FLYQLLRGLKYIHSAN 158
++ KE +YI+ E M L ++S + + F Q+ G+ +I N
Sbjct: 251 VV---TKEP---IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 304
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRDL+ +N+L++A+ KI DFGLAR + ++
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 130/287 (45%), Gaps = 50/287 (17%)
Query: 24 NILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILR 83
N+ G+ +V + L+ +G GAYG V ++KI+ ++ A ++L+
Sbjct: 43 NLTGHAEKVGIENFELLKVLGTGAYGKV-----------FLVRKISGHDTGKLYAMKVLK 91
Query: 84 EIKLLCHM-THENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQII------------ 129
+ ++ T E+ + ++ + + F V + Y +T LH I+
Sbjct: 92 KATIVQKAKTTEHTRTERQVLEHIRQSPFL-VTLHYAFQTETKLHLILDYINGGELFTHL 150
Query: 130 RSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR--T 187
++ T+ Q ++ +++ L+++H +++RD+K N+LL++N + + DFGL++
Sbjct: 151 SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210
Query: 188 TSET----------DFMTEYVVTRWDTLF-PGKDYVQQLTMITELLGSPDDSDLGFLRSD 236
ET ++M +V D+ D+ ++ ELL + ++
Sbjct: 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS 270
Query: 237 NA---RRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFDPAKRI 280
A RR +K P P++ MS +A DL +R+L+ DP KR+
Sbjct: 271 QAEISRRILKSEPPYPQE--------MSALAKDLIQRLLMKDPKKRL 309
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 127/270 (47%), Gaps = 38/270 (14%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK----RILREIKLLCHMTHENI 96
+P+G+G +G V A ++ VA+K + F ++I+ + ++ REI++ H+ H NI
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVL---FKSQIEKEGVEHQLRREIEIQAHLHHPNI 85
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
+++ + D+ + +Y++ E +L++ ++ + + +L L Y H
Sbjct: 86 LRLYNYF--YDRRR---IYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDY 211
V+HRD+KP NLLL +LKI DFG + + + D L P G+ +
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGW--SVHAPSLRRKTMCGTLDYLPPEMIEGRMH 198
Query: 212 VQQL------TMITELL-GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPV- 263
+++ + ELL G+P ++ RR VK KFP P
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFESAS--HNETYRRIVK---------VDLKFPASVPTG 247
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLSS 293
A DL ++L +P++R+ + + HP++ +
Sbjct: 248 AQDLISKLLRHNPSERLPLAQVSAHPWVRA 277
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 65/229 (28%)
Query: 33 SSKYVP---PLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAK-RILREIKLL 88
+S+Y+ P+Q +GRG +G+V A N AIK+I NR A+ +++RE+K L
Sbjct: 1 ASRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKAL 58
Query: 89 CHMTHENIVKVKDII----PPMDKEKFNDVYIVYELMDTDLH------------------ 126
+ H IV+ + P +E+ +++++ E D L
Sbjct: 59 AKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPF 118
Query: 127 ----------------------QIIRSKQALTD-----------DH--CQYFLYQLLRGL 151
Q+ R K+ L D +H C + Q+ +
Sbjct: 119 STKNTVGQLQPSSPKVYLYIQMQLCR-KENLKDWMNRRCSLEDREHGVCLHIFIQIAEAV 177
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVT 200
+++HS ++HRDLKPSN+ + +K+ DFGL T + D + V+T
Sbjct: 178 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV-TAMDQDEEEQTVLT 225
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
+++ + + ++ +G G +G V N+ TK VA+K + + + L E L+
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTK--VAVKTLK---PGTMSVQAFLEEANLM 61
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQA-------LTDDHC 140
+ H+ +V++ ++ K +YI+ E M L ++S + L D
Sbjct: 62 KTLQHDKLVRLYAVVT-----KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLID--- 113
Query: 141 QYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
F Q+ G+ YI N +HRDL+ +N+L++ + KI DFGLAR + ++
Sbjct: 114 --FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 164
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G VCS V + + VAIK + + ++ + L E ++ H NI+ +
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNIIHL 74
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V I+ E M+ L +R T L + G+KY+
Sbjct: 75 EGVV-----TKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLART 187
+ +HRDL N+L+N+N K+ DFG++R
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRV 159
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G VCS V + + VAIK + + ++ + L E ++ H NI+ +
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNIIHL 80
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ K V I+ E M+ L +R T L + G+KY+
Sbjct: 81 EGVV-----TKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLART 187
+ +HRDL N+L+N+N K+ DFG++R
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRV 165
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G VCS + + + VAIK + + + + L E ++ H NI+ +
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEK-QRRDFLGEASIMGQFDHPNIIHL 88
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLL-------RGLK 152
+ ++ K V IV E M+ L + Q+ + QL+ G+K
Sbjct: 89 EGVV-----TKSKPVMIVTEYMENGSLDTF-----LKKNDGQFTVIQLVGMLRGISAGMK 138
Query: 153 YIHSANVLHRDLKPSNLLLNANCDLKICDFGLART 187
Y+ +HRDL N+L+N+N K+ DFGL+R
Sbjct: 139 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 173
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E ++ +R ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NL+++ +K+ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 43 IGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G G +G V A N TK VA+K + + + L E ++ + H+ +VK+
Sbjct: 190 LGAGQFGEVWMATYNKHTK--VAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKLHA 244
Query: 102 IIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQY--FLYQLLRGLKYIHSAN 158
++ KE +YI+ E M L ++S + + F Q+ G+ +I N
Sbjct: 245 VV---TKEP---IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 298
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
+HRDL+ +N+L++A+ KI DFGLAR ++
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLARVGAK 330
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E ++ +R ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NL+++ +K+ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKEIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NL+++ +K+ DFGLA+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 31/174 (17%)
Query: 43 IGRGAYGIVCSAVN---SETKEE--VAIKKITNAFDNRIDAKR-ILREIKLLCHMTHENI 96
+G GA+G V A S TK++ VA+K + D + A++ RE +LL ++ HE+I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALK---DPTLAARKDFQREAELLTNLQHEHI 79
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRS----------------KQALTDDH 139
VK + D + +V+E M DL++ +R+ K L
Sbjct: 80 VKFYGVCGDGDP-----LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 140 CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ Q+ G+ Y+ S + +HRDL N L+ AN +KI DFG++R TD+
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q ++ Y Q+ ++Y+
Sbjct: 76 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
N +HRDL N L+ N +K+ DFGL+R + F
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTF 164
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E ++ +R ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NL+++ +K+ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K + D +++++ +K + H +E +
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKIL--------DKQKVVK-LKQIEHTLNEKRILQ 89
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 149
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 35 KYVPPLQPIGRGAYGIVC----SAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCH 90
+Y+ ++ +G G +G V N T E VA+K + ++ + REI++L
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG-WQREIEILRT 67
Query: 91 MTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRG 150
+ HE+IVK K + + V +V E + + + + F Q+ G
Sbjct: 68 LYHEHIVKYKGCC---EDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEG 124
Query: 151 LKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
+ Y+H+ + +HR L N+LL+ + +KI DFGLA+ E
Sbjct: 125 MAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 164
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 35 KYVPPLQPIGRGAYGIVC----SAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCH 90
+Y+ ++ +G G +G V N T E VA+K + ++ + REI++L
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSG-WQREIEILRT 66
Query: 91 MTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRG 150
+ HE+IVK K + + V +V E + + + + F Q+ G
Sbjct: 67 LYHEHIVKYKGCC---EDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEG 123
Query: 151 LKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
+ Y+H+ + +HR L N+LL+ + +KI DFGLA+ E
Sbjct: 124 MAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 163
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 67 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 117
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 177
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q ++ Y Q+ ++Y+
Sbjct: 83 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 134
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q ++ Y Q+ ++Y+
Sbjct: 78 CTREPPF--------YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 116/274 (42%), Gaps = 34/274 (12%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRI-LREIKLLCHMTHENIVKVKD 101
+G+G +G VC+ T + A KK+ + + + L E ++L + +V +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 102 IIPPMDKEKFNDVYIVYELM---DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D + +V LM D H + + ++ ++ GL+ +H
Sbjct: 252 AYETKDA-----LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSE----------TDFMTEYVVTRWDTLFPG 208
+++RDLKP N+LL+ + ++I D GLA E +M VV F
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTF-S 365
Query: 209 KDYVQQLTMITELLG--SPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
D+ ++ E++ SP ++ + R VK++P + +S++F SP A
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP----EEYSERF---SPQARS 418
Query: 267 LAERMLVFDPAKRI-----TVEEALNHPYLSSLH 295
L ++L DPA+R+ + E HP L+
Sbjct: 419 LCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q ++ Y Q+ ++Y+
Sbjct: 78 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q ++ Y Q+ ++Y+
Sbjct: 78 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 126/284 (44%), Gaps = 40/284 (14%)
Query: 27 GNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIK 86
G +++ K + L+ +G G +G+V + +VAIK I + + + E K
Sbjct: 1 GGSWEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEAK 56
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT--------DLHQIIRSKQALTDD 138
++ +++HE +V++ + K ++I+ E M ++ +++Q L +
Sbjct: 57 VMMNLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--E 109
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYV 198
C+ + ++Y+ S LHRDL N L+N +K+ DFGL+R + EY
Sbjct: 110 MCK----DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYT 161
Query: 199 VTRWDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFP 258
+R + FP + ++ M ++ D G L + ++ + K P+ ++F
Sbjct: 162 SSR-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL--------MWEIYSLGKMPY-ERFT 211
Query: 259 NMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
N S A +A+ + ++ P + E+ Y + +E PT
Sbjct: 212 N-SETAEHIAQGLRLYRP--HLASEKVYTIMYSCWHEKADERPT 252
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q ++ Y Q+ ++Y+
Sbjct: 76 CTREPPF--------YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q ++ Y Q+ ++Y+
Sbjct: 78 CTREPPF--------YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NL+++ +K+ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K + D +++++ +K + H +E +
Sbjct: 32 IKTLGTGSFGRVMLVKHMETGNHYAMKIL--------DKQKVVK-LKQIEHTLNEKRILQ 82
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 142
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 143 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 117/274 (42%), Gaps = 34/274 (12%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRI-LREIKLLCHMTHENIVKVKD 101
+G+G +G VC+ T + A KK+ + + + L E ++L + +V +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA- 250
Query: 102 IIPPMDKEKFNDVYIVYELM---DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
E + + +V LM D H + + ++ ++ GL+ +H
Sbjct: 251 ----YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSE----------TDFMTEYVVTRWDTLFPG 208
+++RDLKP N+LL+ + ++I D GLA E +M VV F
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTF-S 365
Query: 209 KDYVQQLTMITELLG--SPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAID 266
D+ ++ E++ SP ++ + R VK++P + +S++F SP A
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP----EEYSERF---SPQARS 418
Query: 267 LAERMLVFDPAKRI-----TVEEALNHPYLSSLH 295
L ++L DPA+R+ + E HP L+
Sbjct: 419 LCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 80/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E ++ +R + H +++ Q++ +Y
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NL+++ +K+ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G VCS + + VAIK + + + + L E ++ H N+V +
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEK-QRRDFLCEASIMGQFDHPNVVHL 109
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTD-LHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ ++ + V IV E M+ L +R T L + G++Y+
Sbjct: 110 EGVV-----TRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM 164
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
+HRDL N+L+N+N K+ DFGL+R +
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIED 197
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G +G V A + + IK++ + + ++ RE+K L + H NIV
Sbjct: 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRV------KYNNEKAEREVKALAKLDHVNIVHY 69
Query: 100 KDIIPPMD-----------KEKFNDVYIVYELMDTD-LHQIIRSKQALTDDH--CQYFLY 145
D + K ++I E D L Q I ++ D
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGL 184
Q+ +G+ YIHS +++RDLKPSN+ L +KI DFGL
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 35 KYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKIT-NAFDNRIDAKRILREIKLLC 89
+++ ++ +G G +G V C T E+VA+K + + N I + +EI++L
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI--ADLKKEIEILR 78
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII-RSKQALTDDHCQYFLYQL 147
++ HENIVK K I ++ N + ++ E + + L + + ++K + + Q+
Sbjct: 79 NLYHENIVKYKGICT---EDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 135
Query: 148 LRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
+G+ Y+ S +HRDL N+L+ + +KI DFGL + ETD
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETD 179
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 35 KYVPPLQPIGRGAYGIV--C--SAVNSETKEEVAIKKIT-NAFDNRIDAKRILREIKLLC 89
+++ ++ +G G +G V C T E+VA+K + + N I + +EI++L
Sbjct: 9 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI--ADLKKEIEILR 66
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQII-RSKQALTDDHCQYFLYQL 147
++ HENIVK K I ++ N + ++ E + + L + + ++K + + Q+
Sbjct: 67 NLYHENIVKYKGICT---EDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI 123
Query: 148 LRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
+G+ Y+ S +HRDL N+L+ + +KI DFGL + ETD
Sbjct: 124 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETD 167
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 18 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 72
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 73 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 126
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR + ++
Sbjct: 127 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 174
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 103 IPPMDKEKFNDVYIVYELMD---------TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ +YIV E M ++ + +R Q L D Q+ G+ Y
Sbjct: 82 VSE------EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVD-----MAAQIASGMAY 129
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ N +HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 103 IPPMDKEKFNDVYIVYELMD---------TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ +YIV E M ++ + +R Q L D Q+ G+ Y
Sbjct: 82 VSE------EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ-LVD-----MAAQIASGMAY 129
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ N +HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 103 IPPMDKEKFNDVYIVYELMD---------TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ +YIV E M ++ + +R Q L D Q+ G+ Y
Sbjct: 71 VSE------EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVD-----MAAQIASGMAY 118
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ N +HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 119 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 158
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K + D +++++ +K + H +E +
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKIL--------DKQKVVK-LKQIEHTLNEKRILQ 89
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R + H +++ Q++ +Y
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 149
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 13 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 67
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 68 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 121
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR + ++
Sbjct: 122 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 169
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 30/203 (14%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 103 IPPMDKEKFNDVYIVYELMD---------TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ +YIV E M ++ + +R Q L D Q+ G+ Y
Sbjct: 82 VSE------EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQ-LVD-----MAAQIASGMAY 129
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQ 213
+ N +HRDL+ +N+L+ N K+ DFGLAR + ++ R FP K
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-----TARQGAKFPIKWTAP 184
Query: 214 QLTMITELLGSPDDSDLGFLRSD 236
+ + D G L ++
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTE 207
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 103 IPPMDKEKFNDVYIVYELMD---------TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ +YIV E M ++ + +R Q L D Q+ G+ Y
Sbjct: 73 VSE------EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVD-----MAAQIASGMAY 120
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ N +HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 121 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 160
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 14 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 68
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 69 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR + ++
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 170
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 51/282 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G++G V A +T + AIK + +L + + C M + ++ +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDV--------VLMDDDVECTMVEKRVLSLAWE 76
Query: 103 IPPMD------KEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
P + + K N +++ L DL I+S ++ +++ GL+++HS
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDYV 212
+++RDLK N+LL+ + +KI DFG+ + D T D + P G+ Y
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYN 196
Query: 213 QQL------TMITELL-------GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN 259
+ ++ E+L G ++ +R DN P P+
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--------PFYPRW-------- 240
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEAL-NHPYLSSLHEINEE 300
+ A DL ++ V +P KR+ V + HP EIN E
Sbjct: 241 LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL---FREINWE 279
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 62
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 63 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR + ++
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 83 CTREPPF--------YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 91 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 142
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 143 KNFIHRDLAARNCLVGENHLVKVADFGLSR 172
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 79 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKEIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NL+++ +++ DFGLA+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 79 CTREPPF--------YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 83 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 82 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 133
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 134 KNFIHRDLAARNCLVGENHLVKVADFGLSR 163
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 103 IPPMDKEKFNDVYIVYELMD---------TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ +YIV E M ++ + +R Q L D Q+ G+ Y
Sbjct: 82 VSE------EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQ-LVD-----MAAQIASGMAY 129
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ N +HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +++ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 83 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 83 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 33 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 83
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 143
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 144 LHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 80 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 3 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 57
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 58 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 111
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR + ++
Sbjct: 112 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 159
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 103 IPPMDKEKFNDVYIVYELMD---------TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ +YIV E M ++ + +R Q L D Q+ G+ Y
Sbjct: 82 VSE------EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQ-LVD-----MAAQIASGMAY 129
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ N +HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +++ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +++ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IGRG +G V S VA+K + AK L+E ++L +H NIV++ +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGV 180
Query: 103 IPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSANVL 160
+ +YIV EL+ D +R++ A L + G++Y+ S +
Sbjct: 181 C-----TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSE 190
HRDL N L+ LKI DFG++R ++
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 117
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 177
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 103 IPPMDKEKFNDVYIVYELMD---------TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ +YIV E M ++ + +R Q L D Q+ G+ Y
Sbjct: 82 VSE------EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVD-----MAAQIASGMAY 129
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ N +HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 47 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IGRG +G V S VA+K + AK L+E ++L +H NIV++ +
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-FLQEARILKQYSHPNIVRLIGV 180
Query: 103 IPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSANVL 160
+ +YIV EL+ D +R++ A L + G++Y+ S +
Sbjct: 181 C-----TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 161 HRDLKPSNLLLNANCDLKICDFGLARTTSE 190
HRDL N L+ LKI DFG++R ++
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 78 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 78 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 80 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YIV E M +L +R +++ +T Y Q+ ++Y+
Sbjct: 97 CTLEPPF--------YIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK 148
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 149 KNFIHRDLAARNCLVGENHVVKVADFGLSR 178
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 80 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIK 86
+ +++ + + ++ +G G +G V N+ TK VA+K + + + L E
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTK--VAVKTLK---PGTMSVQAFLEEAN 60
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQA-------LTDD 138
L+ + H+ +V++ ++ + +YI+ E M L ++S + L D
Sbjct: 61 LMKTLQHDKLVRLYAVVT-----REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID- 114
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
F Q+ G+ YI N +HRDL+ +N+L++ + KI DFGLAR + ++
Sbjct: 115 ----FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 165
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 51/282 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G++G V A +T + AIK + +L + + C M + ++ +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDV--------VLMDDDVECTMVEKRVLSLAWE 77
Query: 103 IPPMD------KEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
P + + K N +++ L DL I+S ++ +++ GL+++HS
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 137
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDYV 212
+++RDLK N+LL+ + +KI DFG+ + D T D + P G+ Y
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYN 197
Query: 213 QQL------TMITELL-------GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPN 259
+ ++ E+L G ++ +R DN P P+
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--------PFYPRW-------- 241
Query: 260 MSPVAIDLAERMLVFDPAKRITVEEAL-NHPYLSSLHEINEE 300
+ A DL ++ V +P KR+ V + HP EIN E
Sbjct: 242 LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL---FREINWE 280
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 26/156 (16%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IGRGA+G EVA+ K+ N RI A +IL + ++L +
Sbjct: 79 IKVIGRGAFG------------EVAVVKMKNT--ERIYAMKILNKWEMLKRAETACFREE 124
Query: 100 KDIIPPMDKE-------KFNDVYIVYELMD----TDLHQII-RSKQALTDDHCQYFLYQL 147
+D++ D + F D +Y +MD DL ++ + + L +D ++++ ++
Sbjct: 125 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 184
Query: 148 LRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFG 183
+ + IH + +HRD+KP N+LL+ N +++ DFG
Sbjct: 185 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 97
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R + H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 26/156 (16%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IGRGA+G EVA+ K+ N RI A +IL + ++L +
Sbjct: 95 IKVIGRGAFG------------EVAVVKMKNT--ERIYAMKILNKWEMLKRAETACFREE 140
Query: 100 KDIIPPMDKE-------KFNDVYIVYELMD----TDLHQII-RSKQALTDDHCQYFLYQL 147
+D++ D + F D +Y +MD DL ++ + + L +D ++++ ++
Sbjct: 141 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 200
Query: 148 LRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFG 183
+ + IH + +HRD+KP N+LL+ N +++ DFG
Sbjct: 201 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG 236
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 80/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E ++ +R + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NL+++ +K+ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 62
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 63 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA--KRILREIKLLCHMTHENIVKVK 100
IG G +G V A +EVA+K + D I + + +E KL + H NI+ ++
Sbjct: 15 IGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 101 DIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV- 159
+ K ++ +V E + S + + D + Q+ RG+ Y+H +
Sbjct: 73 GVC-----LKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 160 --LHRDLKPSNLLL--------NANCDLKICDFGLARTTSETDFMTEYVVTRW 202
+HRDLK SN+L+ +N LKI DFGLAR T M+ W
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAW 180
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 103 IPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQA--LTDDHCQYFLYQLLRGLKYIHSANV 159
+ +YIV E M+ L ++ + L Q+ G+ Y+ N
Sbjct: 79 VSE------EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY 166
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 103 IPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQA--LTDDHCQYFLYQLLRGLKYIHSANV 159
+ +YIV E M L ++ + L Q+ G+ Y+ N
Sbjct: 75 VSE------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 128
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEY 162
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 17 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 71
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 72 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 125
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR
Sbjct: 126 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 166
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 14 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 68
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 69 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 16 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 70
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 71 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 124
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR
Sbjct: 125 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 165
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 80 RILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDD 138
R RE + + H IV V D + YIV E +D L I+ ++ +T
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDT-GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 116
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
+ + L + H ++HRD+KP+N+L++A +K+ DFG+AR +++
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADS 169
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 82/323 (25%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN--AFDNRIDAKRILREIKLLCHMTHENIVKVK 100
IG+G++G V A + +E VAIK I N AF N+ E++LL + +++ ++K
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI-----EVRLL-ELMNKHDTEMK 115
Query: 101 DIIPPMDKEKF--NDVYIVYELMDTDLHQIIRSK--QALTDDHCQYFLYQLLRGLKYIHS 156
I + + N + +V+E++ +L+ ++R+ + ++ + + F Q+ L ++ +
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 157 A--NVLHRDLKPSNLLLN--ANCDLKICDFGLARTTSETDFMT----------------- 195
+++H DLKP N+LL +KI DFG + + +
Sbjct: 176 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPY 235
Query: 196 EYVVTRW------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
+ + W + LF G + V Q+ I E+LG P L ++ AR++ +
Sbjct: 236 DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD--QAPKARKFFE 293
Query: 244 QLPHVP-------------KQPFSQKFPNMSPVAI----------------------DLA 268
+LP K P ++K N+ V DL
Sbjct: 294 KLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLI 353
Query: 269 ERMLVFDPAKRITVEEALNHPYL 291
RML +DP RI AL H +
Sbjct: 354 LRMLDYDPKTRIQPYYALQHSFF 376
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 42/255 (16%)
Query: 72 FDNR-IDAKRIL--------REIKLLCHM-THENIVKVKDIIPPMDKEKFNDVYIVYELM 121
FDNR + KRIL RE++LL H N+++ D++ F YI EL
Sbjct: 46 FDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRY--FCTEKDRQ-FQ--YIAIELC 100
Query: 122 DTDLHQIIRSKQ-ALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL---NANCDL 177
L + + K A L Q GL ++HS N++HRDLKP N+L+ NA+ +
Sbjct: 101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKI 160
Query: 178 K--ICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRS 235
K I DFGL + + + + +R + PG + M++E + +
Sbjct: 161 KAMISDFGLCKKLA----VGRHSFSRRSGV-PGTEGWIAPEMLSEDCKENPTYTVDIFSA 215
Query: 236 DNARRYVKQLPHVPKQPFSQKFPNM----------------SPVAIDLAERMLVFDPAKR 279
YV P Q+ N+ +A +L E+M+ DP KR
Sbjct: 216 GCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKR 275
Query: 280 ITVEEALNHPYLSSL 294
+ + L HP+ SL
Sbjct: 276 PSAKHVLKHPFFWSL 290
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 103 IPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQA--LTDDHCQYFLYQLLRGLKYIHSANV 159
+ +YIV E M+ L ++ + L Q+ G+ Y+ N
Sbjct: 79 VSE------EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEW 166
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 10 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 64
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 65 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 118
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 159
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILRE 84
++VS + + L+ +G+G++G+V + E + VA+K + + R + L E
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNE 70
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQ-- 141
++ T ++V++ ++ K +V ELM DL +RS + +++
Sbjct: 71 ASVMKGFTCHHVVRLLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 142 --------YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 185
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFD--NRIDAKRILREIKLLCHMTHENIV 97
++ IGRGA+G V V + ++V K+ + F+ R D+ E ++ +V
Sbjct: 80 VKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 138
Query: 98 KVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
+ + +K+ +Y+V E M DL ++ S + + +++ +++ L IHS
Sbjct: 139 Q---LFCAFQDDKY--LYMVMEYMPGGDLVNLM-SNYDVPEKWAKFYTAEVVLALDAIHS 192
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
++HRD+KP N+LL+ + LK+ DFG ET
Sbjct: 193 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 227
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + ET A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NL+++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK 189
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 9 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 63
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 64 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 117
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 158
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G +G V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q ++ Y Q+ ++Y+
Sbjct: 76 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HRDL N L+ N +K+ DFGL+R
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 25/160 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 103 IPPMDKEKFNDVYIVYELMD---------TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ +YIV E M ++ + +R Q L D Q+ G+ Y
Sbjct: 82 VSE------EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVD-----MAAQIASGMAY 129
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ N +HRDL +N+L+ N K+ DFGLAR + ++
Sbjct: 130 VERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEY 169
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIKLL 88
++V + + ++ +G G +G V N TK VA+K + + L E L+
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEANLM 62
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYFLY 145
+ H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 63 KQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 103 IPPMDKEKFNDVYIVYELMD---------TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ +YIV E M ++ + +R Q L D Q+ G+ Y
Sbjct: 82 VSE------EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ-LVD-----MAAQIASGMAY 129
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ N +HRDL+ +N+L+ N K+ DFGLAR
Sbjct: 130 VERMNYVHRDLRAANILVGENLVCKVADFGLAR 162
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
IGRG++ V +++ET EVA ++ + + + +R E + L + H NIV+ D
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN--VL 160
K K V + L ++ + + + Q+L+GL+++H+ ++
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 161 HRDLKPSNLLLNA-NCDLKICDFGLA 185
HRDLK N+ + +KI D GLA
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLA 179
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 41 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 91
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R + H +++ Q++ +Y
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 151
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 152 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 137/326 (42%), Gaps = 88/326 (26%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN--AFDNRIDAKRILREIKLLCHMTHENIVKVK 100
IG+G++G V A + +E VAIK I N AF N+ E++LL + +++ ++K
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI-----EVRLL-ELMNKHDTEMK 115
Query: 101 DIIPPMDKEKF--NDVYIVYELMDTDLHQIIRSK--QALTDDHCQYFLYQLLRGLKYIHS 156
I + + N + +V+E++ +L+ ++R+ + ++ + + F Q+ L ++ +
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 157 --ANVLHRDLKPSNLLLNANCD-----LKICDFGLARTTSETDFMT-------------- 195
+++H DLKP N+LL C+ +KI DFG + + +
Sbjct: 176 PELSIIHCDLKPENILL---CNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLG 232
Query: 196 ---EYVVTRW------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARR 240
+ + W + LF G + V Q+ I E+LG P L ++ AR+
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD--QAPKARK 290
Query: 241 YVKQLPHVP-------------KQPFSQKFPNMSPVAI---------------------- 265
+ ++LP K P ++K N+ V
Sbjct: 291 FFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFK 350
Query: 266 DLAERMLVFDPAKRITVEEALNHPYL 291
DL RML +DP RI AL H +
Sbjct: 351 DLILRMLDYDPKTRIQPYYALQHSFF 376
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 117
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R + H +++ Q++ +Y
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 177
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q ++ Y Q+ ++Y+
Sbjct: 285 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 336
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HR+L N L+ N +K+ DFGL+R
Sbjct: 337 KNFIHRNLAARNCLVGENHLVKVADFGLSR 366
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R ++ H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NL+++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G G++G V + E+ A+K +D +++++ +K + H +E +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVK-LKQIEHTLNEKRILQ 96
Query: 100 KDIIPPMDKEKFN-----DVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + K +F+ ++Y+V E + ++ +R + H +++ Q++ +Y
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HS ++++RDLKP NLL++ +++ DFG A+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 31/163 (19%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 275 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD----DHCQYF--------LYQLLRG 150
+ +YIV E M SK +L D + +Y Q+ G
Sbjct: 331 VSE------EPIYIVTEYM---------SKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 375
Query: 151 LKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ Y+ N +HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 376 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 82/323 (25%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN--AFDNRIDAKRILREIKLLCHMTHENIVKVK 100
IG+G++G V A + +E VAIK I N AF N+ E++LL + +++ ++K
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI-----EVRLL-ELMNKHDTEMK 96
Query: 101 DIIPPMDKEKF--NDVYIVYELMDTDLHQIIRSK--QALTDDHCQYFLYQLLRGLKYIHS 156
I + + N + +V+E++ +L+ ++R+ + ++ + + F Q+ L ++ +
Sbjct: 97 YYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 156
Query: 157 A--NVLHRDLKPSNLLLN--ANCDLKICDFGLARTTSETDFMT----------------- 195
+++H DLKP N+LL +KI DFG + + +
Sbjct: 157 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPY 216
Query: 196 EYVVTRW------------DTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVK 243
+ + W + LF G + V Q+ I E+LG P L ++ AR++ +
Sbjct: 217 DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD--QAPKARKFFE 274
Query: 244 QLPHVP-------------KQPFSQKFPNMSPVAI----------------------DLA 268
+LP K P ++K N+ V DL
Sbjct: 275 KLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLI 334
Query: 269 ERMLVFDPAKRITVEEALNHPYL 291
RML +DP RI AL H +
Sbjct: 335 LRMLDYDPKTRIQPYYALQHSFF 357
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 22/179 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILRE 84
++VS + + L+ +G+G++G+V + E + VA+K + + R + L E
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNE 70
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQ-- 141
++ T ++V++ ++ K +V ELM DL +RS + +++
Sbjct: 71 ASVMKGFTCHHVVRLLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 142 --------YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 22/179 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILRE 84
++VS + + L+ +G+G++G+V + E + VA+K + + R + L E
Sbjct: 9 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNE 67
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQ-- 141
++ T ++V++ ++ K +V ELM DL +RS + +++
Sbjct: 68 ASVMKGFTCHHVVRLLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 142 --------YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 181
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 22/179 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILRE 84
++VS + + L+ +G+G++G+V + E + VA+K + + R + L E
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNE 70
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQ-- 141
++ T ++V++ ++ K +V ELM DL +RS + +++
Sbjct: 71 ASVMKGFTCHHVVRLLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 142 --------YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 31/163 (19%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD----DHCQYF--------LYQLLRG 150
+ +YIV E M SK +L D + +Y Q+ G
Sbjct: 248 VSE------EPIYIVTEYM---------SKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 151 LKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ Y+ N +HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 31/163 (19%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD----DHCQYF--------LYQLLRG 150
+ +YIV E M SK +L D + +Y Q+ G
Sbjct: 248 VSE------EPIYIVTEYM---------SKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 151 LKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ Y+ N +HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 81/156 (51%), Gaps = 26/156 (16%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ IGRGA+G EVA+ K+ NA +++ A +IL + ++L +
Sbjct: 79 LKVIGRGAFG------------EVAVVKLKNA--DKVFAMKILNKWEMLKRAETACFREE 124
Query: 100 KDIIPPMDKE-------KFNDVYIVYELMD----TDLHQII-RSKQALTDDHCQYFLYQL 147
+D++ D + F D +Y +MD DL ++ + + L ++ +++L ++
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEM 184
Query: 148 LRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFG 183
+ + +H + +HRD+KP N+L++ N +++ DFG
Sbjct: 185 VIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFG 220
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 35 KYVPPLQPIGRGAYGIVC----SAVNSETKEEVAIK--KITNAFDNRIDAKRILREIKLL 88
+Y+ ++ +G G +G V N T E VA+K K +R K+ EI +L
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQ---EIDIL 87
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLL 148
+ HE+I+K K + + +V E + + + ++ F Q+
Sbjct: 88 RTLYHEHIIKYKGCC---EDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC 144
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
G+ Y+H+ + +HRDL N+LL+ + +KI DFGLA+ E
Sbjct: 145 EGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 18 GKYVQY-NILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRI 76
GK Y I G +Q + L +G G G V +T +A+K++ + N+
Sbjct: 7 GKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS-GNKE 65
Query: 77 DAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFN------DVYIVYELMDTDLHQIIR 130
+ KRIL ++ + ++K D P + F DV+I ELM T ++ +
Sbjct: 66 ENKRILMDLDV--------VLKSHDC--PYIVQCFGTFITNTDVFIAMELMGTCAEKLKK 115
Query: 131 SKQA-LTDDHCQYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLLNANCDLKICDFGLA 185
Q + + +++ L Y+ V+HRD+KPSN+LL+ +K+CDFG++
Sbjct: 116 RMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 112 NDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNL 169
++ I E MD L Q+++ + + ++ +LRGL Y+ + ++HRD+KPSN+
Sbjct: 87 GEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNI 146
Query: 170 LLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
L+N+ ++K+CDFG++ ++ +V TR
Sbjct: 147 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTR 177
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 31/163 (19%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 103 IPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTD----DHCQYF--------LYQLLRG 150
+ +YIV E M SK +L D + +Y Q+ G
Sbjct: 248 VSE------EPIYIVGEYM---------SKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 151 LKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ Y+ N +HRDL+ +N+L+ N K+ DFGLAR + ++
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 47/288 (16%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIK 86
+++++ + + ++ +G G +G V N TK VAIK + + + L E +
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTK--VAIKTLK---PGTMSPESFLEEAQ 56
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQ--ALTDDHCQYF 143
++ + H+ +V++ ++ +YIV E M+ L ++ + AL +
Sbjct: 57 IMKKLKHDKLVQLYAVVSE------EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM 110
Query: 144 LYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWD 203
Q+ G+ YI N +HRDL+ +N+L+ KI DFGLAR + + R
Sbjct: 111 AAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNE-----XTARQG 165
Query: 204 TLFPGKDYVQQLTMITELLGSPDDSDLGFLRSD------------NARRYVKQLPHVPKQ 251
FP K + + D G L ++ N R ++Q+ +
Sbjct: 166 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM 225
Query: 252 PFSQKFPNMSPVAIDLAERML---VFDPAKRITVEEALNHPYLSSLHE 296
P Q P I L E M+ DP +R T E YL S E
Sbjct: 226 PCPQDCP------ISLHELMIHCWKKDPEERPTFE------YLQSFLE 261
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 27 GNLFQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREI 85
G ++V + + ++ +G G +G V N TK VA+K + + L E
Sbjct: 1 GPEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEA 55
Query: 86 KLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQY 142
L+ + H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 56 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 109
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
Q+ G+ +I N +HR+L+ +N+L++ KI DFGLAR + ++
Sbjct: 110 MAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEY 160
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 112 NDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNL 169
++ I E MD L Q+++ + + +++GL Y+ + ++HRD+KPSN+
Sbjct: 96 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 155
Query: 170 LLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP----GKDYVQQ-------LTMI 218
L+N+ ++K+CDFG++ D M V + P G Y Q L+++
Sbjct: 156 LVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV 213
Query: 219 TELLGS-PDDSDLGFLRSDNARRYV--KQLPHVPKQPFSQKFPNMSPVAIDLAERMLVFD 275
+G P S G + Y+ + P +P FS +F D + L+ +
Sbjct: 214 EMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQ-------DFVNKCLIKN 266
Query: 276 PAKRITVEEALNHPYL 291
PA+R +++ + H ++
Sbjct: 267 PAERADLKQLMVHAFI 282
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 25/160 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGNMSPEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 103 IPPMDKEKFNDVYIVYELMD---------TDLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ +YIV E M ++ + +R Q L D Q+ G+ Y
Sbjct: 249 VSE------EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVD-----MAAQIASGMAY 296
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+ N +HRDL+ +N+L+ N K+ DFGL R + ++
Sbjct: 297 VERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY 336
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 27/163 (16%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRIL------REIKLLCHMTH 93
L+ +G+G YG V ++K+T A +I A ++L R K H
Sbjct: 22 LRVLGKGGYGKV-----------FQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 94 E-NIVK------VKDIIPPMDKEKFNDVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLY 145
E NI++ + D+I + +Y++ E L +L + + +D ++L
Sbjct: 71 ERNILEEVKHPFIVDLIYAF--QTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA 128
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT 188
++ L ++H +++RDLKP N++LN +K+ DFGL + +
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 27/163 (16%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRIL------REIKLLCHMTH 93
L+ +G+G YG V ++K+T A +I A ++L R K H
Sbjct: 22 LRVLGKGGYGKV-----------FQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 94 E-NIVK------VKDIIPPMDKEKFNDVYIVYE-LMDTDLHQIIRSKQALTDDHCQYFLY 145
E NI++ + D+I + +Y++ E L +L + + +D ++L
Sbjct: 71 ERNILEEVKHPFIVDLIYAF--QTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA 128
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT 188
++ L ++H +++RDLKP N++LN +K+ DFGL + +
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 80 RILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDD 138
R RE + + H IV V D + YIV E +D L I+ ++ +T
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDT-GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 116
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
+ + L + H ++HRD+KP+N++++A +K+ DFG+AR +++
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 80 RILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDD 138
R RE + + H IV V D + YIV E +D L I+ ++ +T
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDT-GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 116
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
+ + L + H ++HRD+KP+N++++A +K+ DFG+AR +++
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 80 RILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDD 138
R RE + + H IV V D + YIV E +D L I+ ++ +T
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDT-GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 116
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
+ + L + H ++HRD+KP+N++++A +K+ DFG+AR +++
Sbjct: 117 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 22/179 (12%)
Query: 31 QVSSKYVPPLQPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILREI 85
+VS + + L+ +G+G++G+V + E + VA+K + + R + L E
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEA 70
Query: 86 KLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQ--- 141
++ T ++V++ ++ K +V ELM DL +RS + +++
Sbjct: 71 SVMKGFTCHHVVRLLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 125
Query: 142 -------YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD+
Sbjct: 126 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY 184
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 282 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 333
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HR+L N L+ N +K+ DFGL+R
Sbjct: 334 KNFIHRNLAARNCLVGENHLVKVADFGLSR 363
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G G YG V V + VA+K + ++ ++ + L+E ++ + H N+V++ +
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 103 I---PPMDKEKFNDVYIVYELMD-TDLHQIIR--SKQALTDDHCQYFLYQLLRGLKYIHS 156
PP YI+ E M +L +R ++Q + Y Q+ ++Y+
Sbjct: 324 CTREPPF--------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 375
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
N +HR+L N L+ N +K+ DFGL+R
Sbjct: 376 KNFIHRNLAARNCLVGENHLVKVADFGLSR 405
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L +G G+YG V + E A+K+ + F D R L E+ +HE + +
Sbjct: 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVG-----SHEKVGQH 116
Query: 100 KDIIP-PMDKEKFNDVYIVYELMDTDLHQIIRSKQA-LTDDHCQYFLYQLLRGLKYIHSA 157
+ E+ +Y+ EL L Q + A L + +L L L ++HS
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGL 184
++H D+KP+N+ L K+ DFGL
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 80 RILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDD 138
R RE + + H IV V D + YIV E +D L I+ ++ +T
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDT-GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 133
Query: 139 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
+ + L + H ++HRD+KP+N++++A +K+ DFG+AR +++
Sbjct: 134 RAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 43 IGRGAYGIVCSAVNSETKE---EVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G V + + VAIK N + + K L+E + H +IVK+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 104
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIR-SKQALTDDHCQYFLYQLLRGLKYIHSA 157
+I N V+I+ EL +L ++ K +L + YQL L Y+ S
Sbjct: 105 IGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 158
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L+++N +K+ DFGL+R ++ +
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 194
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 35 KYVPPLQPIGRGAYGIVC----SAVNSETKEEVAIK--KITNAFDNRIDAKRILREIKLL 88
+Y+ ++ +G G +G V N T E VA+K K +R K+ EI +L
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDIL 70
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLL 148
+ HE+I+K K ++ +V E + + + ++ F Q+
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQ---LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC 127
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP 207
G+ Y+HS + +HR+L N+LL+ + +KI DFGLA+ E EY R D P
Sbjct: 128 EGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSP 183
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 43 IGRGAYGIVCSAVNSETKE---EVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G V + + VAIK N + + K L+E + H +IVK+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 73
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIR-SKQALTDDHCQYFLYQLLRGLKYIHSA 157
+I N V+I+ EL +L ++ K +L + YQL L Y+ S
Sbjct: 74 IGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 127
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L+++N +K+ DFGL+R ++ +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 43 IGRGAYGIVCSAVNSETKE---EVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G V + + VAIK N + + K L+E + H +IVK+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 79
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIR-SKQALTDDHCQYFLYQLLRGLKYIHSA 157
+I N V+I+ EL +L ++ K +L + YQL L Y+ S
Sbjct: 80 IGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 133
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L+++N +K+ DFGL+R ++ +
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 169
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILRE 84
++VS + + L+ +G+G++G+V + E + VA+K + + R + L E
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNE 70
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQ-- 141
++ T ++V++ ++ K +V ELM DL +RS + +++
Sbjct: 71 ASVMKGFTCHHVVRLLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 142 --------YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HR+L N ++ + +KI DFG+ R ETD+
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY 185
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILRE 84
++VS + + L+ +G+G++G+V + E + VA+K + + R + L E
Sbjct: 13 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNE 71
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQ-- 141
++ T ++V++ ++ K +V ELM DL +RS + +++
Sbjct: 72 ASVMKGFTCHHVVRLLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 142 --------YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HR+L N ++ + +KI DFG+ R ETD+
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY 186
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 43 IGRGAYGIVCSAVNSETKE---EVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G V + + VAIK N + + K L+E + H +IVK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIR-SKQALTDDHCQYFLYQLLRGLKYIHSA 157
+I N V+I+ EL +L ++ K +L + YQL L Y+ S
Sbjct: 77 IGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 130
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L+++N +K+ DFGL+R ++ +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 166
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 43 IGRGAYGIVCSAVNSETKE---EVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G V + + VAIK N + + K L+E + H +IVK+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 78
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIR-SKQALTDDHCQYFLYQLLRGLKYIHSA 157
+I N V+I+ EL +L ++ K +L + YQL L Y+ S
Sbjct: 79 IGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 132
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L+++N +K+ DFGL+R ++ +
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 168
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 43 IGRGAYGIVCSAVNSETKE---EVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G V + + VAIK N + + K L+E + H +IVK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIR-SKQALTDDHCQYFLYQLLRGLKYIHSA 157
+I N V+I+ EL +L ++ K +L + YQL L Y+ S
Sbjct: 77 IGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 130
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L+++N +K+ DFGL+R ++ +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 166
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT----NAFDNRIDAKRILREIKLLCHMT-HEN 95
+ +G GA+G V A +E A+ K+ + + + + ++ E+K++ H+ HEN
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 96 IVKVKDIIPPMDKEKFNDVYIVY-----------ELMDTDLHQIIRSKQALTDDHCQYFL 144
IV + Y Y +++TD I + A T D +F
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD-LLHFS 170
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
Q+ +G+ ++ S N +HRD+ N+LL KI DFGLAR
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 28 NLFQVSSKYVPPLQPIGRGAYGIVCSAV-NSETKEEVAIKKITNAFDNRIDAKRILREIK 86
+ ++V + + ++ +G G G V N TK VA+K + + L E
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTK--VAVKSLKQG---SMSPDAFLAEAN 60
Query: 87 LLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQA--LTDDHCQYF 143
L+ + H+ +V++ ++ +YI+ E M+ L +++ LT +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM 114
Query: 144 LYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
Q+ G+ +I N +HRDL+ +N+L++ KI DFGLAR + +
Sbjct: 115 AAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAE 163
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 43 IGRGAYGIVCSAVNSETKE---EVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G V + + VAIK N + + K L+E + H +IVK+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 81
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIR-SKQALTDDHCQYFLYQLLRGLKYIHSA 157
+I N V+I+ EL +L ++ K +L + YQL L Y+ S
Sbjct: 82 IGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 135
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L+++N +K+ DFGL+R ++ +
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 43 IGRGAYGIVCSAVNSETKE---EVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G V + + VAIK N + + K L+E + H +IVK+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 456
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQ-ALTDDHCQYFLYQLLRGLKYIHSA 157
+I N V+I+ EL +L ++ ++ +L + YQL L Y+ S
Sbjct: 457 IGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 510
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L+++N +K+ DFGL+R ++ +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 33/173 (19%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ IG G +G V A + + I+++ + + ++ RE+K L + H NIV
Sbjct: 17 IELIGSGGFGQVFKAKHRIDGKTYVIRRV------KYNNEKAEREVKALAKLDHVNIVHY 70
Query: 100 KDIIPPMD------------------------KEKFNDVYIVYELMDTD-LHQIIRSKQA 134
D + K ++I E D L Q I ++
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 135 LTDDH--CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA 185
D Q+ +G+ YIHS ++HRDLKPSN+ L +KI DFGL
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 126/281 (44%), Gaps = 40/281 (14%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+++ K + L+ +G G +G+V + +VAIK I + + + E K++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMM 59
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT--------DLHQIIRSKQALTDDHCQ 141
+++HE +V++ + K ++I+ E M ++ +++Q L + C+
Sbjct: 60 NLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK 112
Query: 142 YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
+ ++Y+ S LHRDL N L+N +K+ DFGL+R + ++ T V ++
Sbjct: 113 ----DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSK 167
Query: 202 WDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMS 261
FP + ++ M ++ D G L + ++ + K P+ ++F N S
Sbjct: 168 ----FPVRWSPPEVLMYSKFSSKSDIWAFGVL--------MWEIYSLGKMPY-ERFTN-S 213
Query: 262 PVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
A +A+ + ++ P + E+ Y + +E PT
Sbjct: 214 ETAEHIAQGLRLYRP--HLASEKVYTIMYSCWHEKADERPT 252
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G G VC V + VAIK + + R + L E ++ H NI+++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER-QRRDFLSEASIMGQFDHPNIIRL 115
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLL-------RGL 151
+ ++ + IV E M+ L +R+ Q+ + QL+ G+
Sbjct: 116 EGVV-----TRGRLAMIVTEYMENGSLDTFLRTHDG------QFTIMQLVGMLRGVGAGM 164
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+Y+ +HRDL N+L+++N K+ DFGL+R
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 31/178 (17%)
Query: 41 QPIGRGAYGIVCSA----VNSETKEE---VAIKKITNAFDNRIDAKRILREIKLLCHMT- 92
+P+G GA+G V A ++ + +E VA+K + + + D ++ E++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 93 HENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSK----------------QAL 135
H+NI+ + + +Y++ E +L + +R++ + +
Sbjct: 100 HKNIINLLGAC-----TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 136 TDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
T YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G G VC V + VAIK + + R + L E ++ H NI+++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER-QRRDFLSEASIMGQFDHPNIIRL 115
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLL-------RGL 151
+ ++ + IV E M+ L +R+ Q+ + QL+ G+
Sbjct: 116 EGVV-----TRGRLAMIVTEYMENGSLDTFLRTHDG------QFTIMQLVGMLRGVGAGM 164
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+Y+ +HRDL N+L+++N K+ DFGL+R
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 31/178 (17%)
Query: 41 QPIGRGAYGIVCSA----VNSETKEE---VAIKKITNAFDNRIDAKRILREIKLLCHMT- 92
+P+G GA+G V A ++ + +E VA+K + + + D ++ E++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 93 HENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSK----------------QAL 135
H+NI+ + + +Y++ E +L + +R++ + +
Sbjct: 100 HKNIITLLGAC-----TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 136 TDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
T YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+++ K + L+ +G G +G+V + +VAIK I + + + E K++
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMM 58
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT--------DLHQIIRSKQALTDDHCQ 141
+++HE +V++ + K ++I+ E M ++ +++Q L + C+
Sbjct: 59 NLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK 111
Query: 142 YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
+ ++Y+ S LHRDL N L+N +K+ DFGL+R + ++ +
Sbjct: 112 ----DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV---- 163
Query: 202 WDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMS 261
+ FP + ++ M ++ D G L + ++ + K P+ ++F N S
Sbjct: 164 -GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL--------MWEIYSLGKMPY-ERFTN-S 212
Query: 262 PVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
A +A+ + ++ P + E+ Y + +E PT
Sbjct: 213 ETAEHIAQGLRLYRP--HLASEKVYTIMYSCWHEKADERPT 251
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 22 QYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRI 81
Q + +G ++ + + + G + V A + + E A+K++ + + + A I
Sbjct: 15 QSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRA--I 72
Query: 82 LREIKLLCHMT-HENIVKVKDIIPPMDKEKFN----DVYIVYELMDTDLHQIIR---SKQ 133
++E+ + ++ H NIV+ + KE+ + + ++ EL L + ++ S+
Sbjct: 73 IQEVCFMKKLSGHPNIVQFCSA-ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG 131
Query: 134 ALTDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNANCDLKICDFGLARTTS 189
L+ D YQ R ++++H ++HRDLK NLLL+ +K+CDFG A T S
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+++ K + L+ +G G +G+V + +VAIK I + + + E K++
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMM 65
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT--------DLHQIIRSKQALTDDHCQ 141
+++HE +V++ + K ++I+ E M ++ +++Q L + C+
Sbjct: 66 NLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK 118
Query: 142 YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
+ ++Y+ S LHRDL N L+N +K+ DFGL+R + ++ +
Sbjct: 119 ----DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV---- 170
Query: 202 WDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMS 261
+ FP + ++ M ++ D G L + ++ + K P+ ++F N S
Sbjct: 171 -GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL--------MWEIYSLGKMPY-ERFTN-S 219
Query: 262 PVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
A +A+ + ++ P + E+ Y + +E PT
Sbjct: 220 ETAEHIAQGLRLYRP--HLASEKVYTIMYSCWHEKADERPT 258
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 31/178 (17%)
Query: 41 QPIGRGAYGIVCSA----VNSETKEE---VAIKKITNAFDNRIDAKRILREIKLLCHMT- 92
+P+G GA+G V A ++ + +E VA+K + + + D ++ E++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 93 HENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSK----------------QAL 135
H+NI+ + + +Y++ E +L + +R++ + +
Sbjct: 100 HKNIIHLLGAC-----TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 136 TDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
T YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+++ K + L+ +G G +G+V + +VAIK I + + + E K++
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMM 74
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT--------DLHQIIRSKQALTDDHCQ 141
+++HE +V++ + K ++I+ E M ++ +++Q L + C+
Sbjct: 75 NLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK 127
Query: 142 YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
+ ++Y+ S LHRDL N L+N +K+ DFGL+R + ++ +
Sbjct: 128 ----DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV---- 179
Query: 202 WDTLFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMS 261
+ FP + ++ M ++ D G L + ++ + K P+ ++F N S
Sbjct: 180 -GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL--------MWEIYSLGKMPY-ERFTN-S 228
Query: 262 PVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
A +A+ + ++ P + E+ Y + +E PT
Sbjct: 229 ETAEHIAQGLRLYRP--HLASEKVYTIMYSCWHEKADERPT 267
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 139/336 (41%), Gaps = 81/336 (24%)
Query: 27 GNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRI---DAKRILR 83
G+L ++ KY IG+G+YG+V A+ ++T+ AIK + +I D +RI
Sbjct: 19 GSLLELQKKYHLK-GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT 77
Query: 84 EIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYEL----------------------M 121
E++L+ + H NI ++ ++ + E++ + +V EL M
Sbjct: 78 EVRLMKKLHHPNIARLYEV---YEDEQY--ICLVMELCHGGHLLDKLNVFIDDSTGKCAM 132
Query: 122 DTDLHQIIR----SKQALTD---------DHCQY------FLYQLLRGLKYIHSANVLHR 162
D QI +++A+ D Q + Q+ L Y+H+ + HR
Sbjct: 133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHR 192
Query: 163 DLKPSNLLLNAN--CDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYV---QQLTM 217
D+KP N L + N ++K+ DFGL++ + + Y +T G Y + L
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK----AGTPYFVAPEVLNT 248
Query: 218 ITELLGSPDDSDLGFLRSDNARRYVKQLPHVP----------KQPFSQKF----PN---M 260
E G D+ S ++ + VP Q ++K PN +
Sbjct: 249 TNESYGPKCDA-----WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL 303
Query: 261 SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHE 296
SP+A DL +L + +R AL HP++S +
Sbjct: 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 43 IGRGAYGIVCSAVNSETKE---EVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G V + + VAIK N + + K L+E + H +IVK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQ-ALTDDHCQYFLYQLLRGLKYIHSA 157
+I N V+I+ EL +L ++ ++ +L + YQL L Y+ S
Sbjct: 77 IGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 130
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRD+ N+L+++N +K+ DFGL+R
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFD--NRIDAKRILREIKLLCHMTHENIV 97
++ IGRGA+G V V ++ +V K+ + F+ R D+ E ++ +V
Sbjct: 79 VKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 98 KVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
+ + +++ +Y+V E M DL ++ S + + +++ +++ L IHS
Sbjct: 138 Q---LFYAFQDDRY--LYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQ 213
+HRD+KP N+LL+ + LK+ DFG M + + R DT DY+
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMK------MNKEGMVRCDTAVGTPDYIS 242
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 35 KYVPPLQPIGRGAYGIVC----SAVNSETKEEVAIK--KITNAFDNRIDAKRILREIKLL 88
+Y+ ++ +G G +G V N T E VA+K K +R K+ EI +L
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDIL 70
Query: 89 CHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLL 148
+ HE+I+K K ++ +V E + + + ++ F Q+
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQ---LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC 127
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFP 207
G+ Y+H+ + +HR+L N+LL+ + +KI DFGLA+ E EY R D P
Sbjct: 128 EGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSP 183
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILRE 84
++VS + + L+ +G+G++G+V + E + VA+K + + R + L E
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNE 70
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQ-- 141
++ T ++V++ ++ K +V ELM DL +RS + +++
Sbjct: 71 ASVMKGFTCHHVVRLLGVV-----SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 142 --------YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ET +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY 185
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 43 IGRGAYGIVCSAVNSETKE---EVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G V + + VAIK N + + K L+E + H +IVK+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 456
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQ-ALTDDHCQYFLYQLLRGLKYIHSA 157
+I N V+I+ EL +L ++ ++ +L + YQL L Y+ S
Sbjct: 457 IGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 510
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L++A +K+ DFGL+R ++ +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 546
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 43 IGRGAYGIVCSAVNSETKE---EVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IG G +G V + + VAIK N + + K L+E + H +IVK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVKL 76
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQ-ALTDDHCQYFLYQLLRGLKYIHSA 157
+I N V+I+ EL +L ++ ++ +L + YQL L Y+ S
Sbjct: 77 IGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 130
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L++A +K+ DFGL+R ++ +
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 166
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D+
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 119/271 (43%), Gaps = 40/271 (14%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ +G G +G+V + +VAIK I + + + E K++ +++HE +V++
Sbjct: 9 LKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT--------DLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ K ++I+ E M ++ +++Q L + C+ + +
Sbjct: 65 YGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK----DVCEAM 113
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDY 211
+Y+ S LHRDL N L+N +K+ DFGL+R + ++ + + FP +
Sbjct: 114 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-----GSKFPVRWS 168
Query: 212 VQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPVAIDLAERM 271
++ M ++ D G L + ++ + K P+ ++F N S A +A+ +
Sbjct: 169 PPEVLMYSKFSSKSDIWAFGVL--------MWEIYSLGKMPY-ERFTN-SETAEHIAQGL 218
Query: 272 LVFDPAKRITVEEALNHPYLSSLHEINEEPT 302
++ P + E+ Y + +E PT
Sbjct: 219 RLYRP--HLASEKVYTIMYSCWHEKADERPT 247
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D+
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFD--NRIDAKRILREIKLLCHMTHENIV 97
++ IGRGA+G V V ++ +V K+ + F+ R D+ E ++ +V
Sbjct: 79 VKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 98 KVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
+ + +++ +Y+V E M DL ++ S + + +++ +++ L IHS
Sbjct: 138 Q---LFYAFQDDRY--LYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQ 213
+HRD+KP N+LL+ + LK+ DFG M + + R DT DY+
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMK------MNKEGMVRCDTAVGTPDYIS 242
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D+
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFD--NRIDAKRILREIKLLCHMTHENIV 97
++ IGRGA+G V V ++ +V K+ + F+ R D+ E ++ +V
Sbjct: 74 VKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 132
Query: 98 KVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
+ + +++ +Y+V E M DL ++ S + + +++ +++ L IHS
Sbjct: 133 Q---LFYAFQDDRY--LYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLALDAIHS 186
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWDTLFPGKDYVQ 213
+HRD+KP N+LL+ + LK+ DFG M + + R DT DY+
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMK------MNKEGMVRCDTAVGTPDYIS 237
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 115 YIVYELMD-TDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA 173
YIV E +D L I+ ++ +T + + L + H ++HRD+KP+N++++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 174 NCDLKICDFGLARTTSET 191
+K+ DFG+AR +++
Sbjct: 152 TNAVKVMDFGIARAIADS 169
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 31/178 (17%)
Query: 41 QPIGRGAYGIVCSA----VNSETKEE---VAIKKITNAFDNRIDAKRILREIKLLCHMT- 92
+P+G GA+G V A ++ + +E VA+K + + + D ++ E++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 93 HENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSK----------------QAL 135
H+NI+ + + +Y++ E +L + +R++ + +
Sbjct: 100 HKNIINLLGAC-----TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 136 TDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
T YQL RG++Y+ S +HRDL N+L+ N ++I DFGLAR + D+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDY 212
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D+
Sbjct: 156 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 204
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D+
Sbjct: 153 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 201
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D+
Sbjct: 210 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 258
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 31/177 (17%)
Query: 41 QPIGRGAYGIVCSA----VNSETKEE---VAIKKITNAFDNRIDAKRILREIKLLCHMT- 92
+P+G GA+G V A ++ + +E VA+K + + + D ++ E++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 93 HENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSK----------------QAL 135
H+NI+ + + +Y++ E +L + +R++ + +
Sbjct: 100 HKNIINLLGAC-----TQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 136 TDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
T YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 43 IGRGAYGIVCSAVNSETKEE---VAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVK 98
+G G +G V V + K E VA+K T D +D K + + E ++ ++ H +IVK
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVK--TCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ II ++Y EL H + R+K +L + Q+ + + Y+ S N
Sbjct: 90 LIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 145
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L+ + +K+ DFGL+R + D+
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 180
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 31/177 (17%)
Query: 41 QPIGRGAYGIVCSA----VNSETKEE---VAIKKITNAFDNRIDAKRILREIKLLCHMT- 92
+P+G GA+G V A ++ + +E VA+K + + + D ++ E++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 93 HENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSK----------------QAL 135
H+NI+ + + +Y++ E +L + +R++ + +
Sbjct: 100 HKNIINLLGAC-----TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 136 TDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
T YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQL RG++Y+ S +HRDL N+L+ N +KI DFGLAR + D+
Sbjct: 151 YQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDY 199
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 124 DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-CDLKICDF 182
DL I + AL ++ + F +Q+L +++ H+ VLHRD+K N+L++ N +LK+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 183 G---LARTTSETDF 193
G L + T TDF
Sbjct: 203 GSGALLKDTVYTDF 216
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDI 102
+G+G +G V + T VAIK + + + L+E +++ + HE +V++ +
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-VAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 103 I---PPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
+ P ++ + + + + + +R Q L D Q+ G+ Y+ N
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQ-LVD-----MAAQIASGMAYVERMNY 125
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL+ +N+L+ N K+ DFGLAR
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLAR 152
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 43 IGRGAYGIVCSAVNSETKEE---VAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVK 98
+G G +G V V + K E VA+K T D +D K + + E ++ ++ H +IVK
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVK--TCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ II ++Y EL H + R+K +L + Q+ + + Y+ S N
Sbjct: 78 LIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 133
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L+ + +K+ DFGL+R + D+
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 43 IGRGAYGIVCSAVNSETKEE---VAIKKITNAFDNRIDAK-RILREIKLLCHMTHENIVK 98
+G G +G V V + K E VA+K T D +D K + + E ++ ++ H +IVK
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVK--TCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+ II ++Y EL H + R+K +L + Q+ + + Y+ S N
Sbjct: 74 LIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 129
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRD+ N+L+ + +K+ DFGL+R + D+
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 164
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIK-KITNAFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G G +G V V K+++ + K+ + D + ++RE +++ + + IV++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 102 IIPPMDKEKFNDVYIVYELMDTD-LHQ-IIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
+ + + +V E+ LH+ ++ ++ + + L+Q+ G+KY+ N
Sbjct: 78 VC------QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLARTTSETD-FMTEYVVTRW 202
+HRDL N+LL KI DFGL++ D + T +W
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 175
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 132 KQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
K+ +T + + +Q+ RG++++ S +HRDL N+LL+ N +KICDFGLAR
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLAR 247
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 112 NDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNL 169
++ I E MD L Q+++ + + +++GL Y+ + ++HRD+KPSN+
Sbjct: 80 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 139
Query: 170 LLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
L+N+ ++K+CDFG++ + + E+V TR
Sbjct: 140 LVNSRGEIKLCDFGVSGQLID-EMANEFVGTR 170
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 41 QPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHM-THE 94
+ +G GA+G V A + S+ VA+K + + + + + ++ E+K+L ++ H
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHM 103
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQ------------------ALT 136
NIV + Y Y DL +R K+ AL
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCY----GDLLNFLRRKRDSFICSKTSPAIMEDDELALD 159
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ F YQ+ +G+ ++ S N +HRDL N+LL KICDFGLAR
Sbjct: 160 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 209
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 41 QPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHM-THE 94
+ +G GA+G V A + S+ VA+K + + + + + ++ E+K+L ++ H
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHM 110
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQ------------------ALT 136
NIV + Y Y DL +R K+ AL
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCY----GDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ F YQ+ +G+ ++ S N +HRDL N+LL KICDFGLAR
Sbjct: 167 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 41 QPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHM-THE 94
+ +G GA+G V A + S+ VA+K + + + + + ++ E+K+L ++ H
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHM 110
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQ------------------ALT 136
NIV + Y Y DL +R K+ AL
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCY----GDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ F YQ+ +G+ ++ S N +HRDL N+LL KICDFGLAR
Sbjct: 167 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 41 QPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHM-THE 94
+ +G GA+G V A + S+ VA+K + + + + + ++ E+K+L ++ H
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHM 105
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQ------------------ALT 136
NIV + Y Y DL +R K+ AL
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCY----GDLLNFLRRKRDSFICSKTSPAIMEDDELALD 161
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ F YQ+ +G+ ++ S N +HRDL N+LL KICDFGLAR
Sbjct: 162 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 14 QRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + + +Y +++T I L D Q +G+
Sbjct: 71 GYSTAPQLAIVTQWCEG---SSLYHHLHIIETKFEMI-----KLID-----IARQTAQGM 117
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR 156
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 41 QPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHM-THE 94
+ +G GA+G V A + S+ VA+K + + + + + ++ E+K+L ++ H
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHM 87
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQ------------------ALT 136
NIV + Y Y DL +R K+ AL
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCY----GDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ F YQ+ +G+ ++ S N +HRDL N+LL KICDFGLAR
Sbjct: 144 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 193
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIK-KITNAFDNRIDAKRILREIKLLCHMTHENIVKVKD 101
+G G +G V V K+++ + K+ + D + ++RE +++ + + IV++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 102 IIPPMDKEKFNDVYIVYELMDTD-LHQ-IIRSKQALTDDHCQYFLYQLLRGLKYIHSANV 159
+ + + +V E+ LH+ ++ ++ + + L+Q+ G+KY+ N
Sbjct: 404 VC------QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 160 LHRDLKPSNLLLNANCDLKICDFGLARTTSETD-FMTEYVVTRW 202
+HR+L N+LL KI DFGL++ D + T +W
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 501
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKD- 101
IG+G +G V + EVAI+ I DN K RE+ HEN+V
Sbjct: 41 IGKGRFGQV---YHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 102 -IIPPMDKEKFNDVYIVYEL-MDTDLHQIIRSKQALTD-DHCQYFLYQLLRGLKYIHSAN 158
+ PP + I+ L L+ ++R + + D + + ++++G+ Y+H+
Sbjct: 98 CMSPP-------HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGL 184
+LH+DLK N+ + N + I DFGL
Sbjct: 151 ILHKDLKSKNVFYD-NGKVVITDFGL 175
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 40 LQPIGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHEN 95
L+ +G G++G+V S VA+K + ++ +A +RE+ + + H N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 96 IVKVKDII--PPMDKEKFNDVYIVYEL--MDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
++++ ++ PPM +V EL + + L ++ + + + Q+ G+
Sbjct: 83 LIRLYGVVLTPPMK--------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 134
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
Y+ S +HRDL NLLL +KI DFGL R + D
Sbjct: 135 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 26/185 (14%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLC 89
+++ K + L+ +G G +G+V + +VAIK I + + + E K++
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMM 74
Query: 90 HMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDT--------DLHQIIRSKQALTDDHCQ 141
+++HE +V++ + K ++I+ E M ++ +++Q L + C+
Sbjct: 75 NLSHEKLVQLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK 127
Query: 142 YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT---SETDFMTEYV 198
+ ++Y+ S LHRDL N L+N +K+ DFGL+R ET +
Sbjct: 128 ----DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF 183
Query: 199 VTRWD 203
RW
Sbjct: 184 PVRWS 188
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 40 LQPIGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHEN 95
L+ +G G++G+V S VA+K + ++ +A +RE+ + + H N
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 96 IVKVKDII--PPMDKEKFNDVYIVYEL--MDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
++++ ++ PPM +V EL + + L ++ + + + Q+ G+
Sbjct: 83 LIRLYGVVLTPPMK--------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 134
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
Y+ S +HRDL NLLL +KI DFGL R + D
Sbjct: 135 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 40 LQPIGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHEN 95
L+ +G G++G+V S VA+K + ++ +A +RE+ + + H N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 96 IVKVKDII--PPMDKEKFNDVYIVYEL--MDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
++++ ++ PPM +V EL + + L ++ + + + Q+ G+
Sbjct: 77 LIRLYGVVLTPPMK--------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 128
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
Y+ S +HRDL NLLL +KI DFGL R + D
Sbjct: 129 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 113/258 (43%), Gaps = 35/258 (13%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L +G+G++G V A T+E AIK + ++++ + C M + ++ +
Sbjct: 24 LMVLGKGSFGKVMLADRKGTEELYAIKILKKDV--------VIQDDDVECTMVEKRVLAL 75
Query: 100 KDIIPPMDK-----EKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
D P + + + + +Y V E ++ DL I+ + ++ ++ GL +
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFF 135
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR-------TTSETDFMTEYVVTRWDTLF 206
+H +++RDLK N++L++ +KI DFG+ + TT E +Y+
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQ 195
Query: 207 P-GK--DYVQQLTMITELL-GSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSP 262
P GK D+ ++ E+L G P F D + + H P S +S
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQPP-----FDGEDEDELFQSIMEHNVSYPKS-----LSK 245
Query: 263 VAIDLAERMLVFDPAKRI 280
A+ + + ++ PAKR+
Sbjct: 246 EAVSICKGLMTKHPAKRL 263
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 21 VQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRID 77
VQ+ ++G SS V + IGRG +G V N K A+K + N + +
Sbjct: 18 VQHVVIGP----SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGE 72
Query: 78 AKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALT 136
+ L E ++ +H N++ + I + + + + ++ + DL IR++ T
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPT 129
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT 195
F Q+ +G+KY+ S +HRDL N +L+ +K+ DFGLAR + ++ +
Sbjct: 130 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 188
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 43 IGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IGRG +G V N K A+K + N + + + L E ++ +H N++ +
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSAN 158
I + + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 92 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT 195
+HRDL N +L+ +K+ DFGLAR + ++ +
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 185
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 43 IGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IGRG +G V N K A+K + N + + + L E ++ +H N++ +
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSAN 158
I + + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 115 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 171
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT 195
+HRDL N +L+ +K+ DFGLAR + ++ +
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 208
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 43 IGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IGRG +G V N K A+K + N + + + L E ++ +H N++ +
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSAN 158
I + + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 89 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 145
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT 195
+HRDL N +L+ +K+ DFGLAR + ++ +
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 182
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 43 IGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IGRG +G V N K A+K + N + + + L E ++ +H N++ +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSAN 158
I + + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 96 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT 195
+HRDL N +L+ +K+ DFGLAR + ++ +
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 189
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 43 IGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IGRG +G V N K A+K + N + + + L E ++ +H N++ +
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSAN 158
I + + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 116 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 172
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT 195
+HRDL N +L+ +K+ DFGLAR + ++ +
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 209
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 21 VQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRID 77
VQ+ ++G SS V + IGRG +G V N K A+K + N + +
Sbjct: 20 VQHVVIGP----SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGE 74
Query: 78 AKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALT 136
+ L E ++ +H N++ + I + + + + ++ + DL IR++ T
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPT 131
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
F Q+ +G+K++ S +HRDL N +L+ +K+ DFGLAR + +F
Sbjct: 132 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 43 IGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IGRG +G V N K A+K + N + + + L E ++ +H N++ +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSAN 158
I + + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 97 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT 195
+HRDL N +L+ +K+ DFGLAR + ++ +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 112/284 (39%), Gaps = 44/284 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMT-HENIVK 98
L+ IG G +G V V AIK+ +D + LRE+ + H ++V+
Sbjct: 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 75
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D + Y + + + R + + L Q+ RGL+YIHS +
Sbjct: 76 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 135
Query: 159 VLHRDLKPSNLLL------NANCD-------------LKICDFG-LARTTS------ETD 192
++H D+KPSN+ + NA + KI D G + R +S ++
Sbjct: 136 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 195
Query: 193 FMTEYVVTRWDTLFPGKD-YVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQ--LPHVP 249
F+ V+ T P D + LT++ P R+ + ++Q LP +P
Sbjct: 196 FLANEVLQENYTHLPKADIFALALTVVCAAGAEP------LPRNGDQWHEIRQGRLPRIP 249
Query: 250 KQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
Q SQ+F + V M+ DP +R + + H L S
Sbjct: 250 -QVLSQEFTELLKV-------MIHPDPERRPSAMALVKHSVLLS 285
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 43 IGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IGRG +G V N K A+K + N + + + L E ++ +H N++ +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSAN 158
I + + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 97 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT 195
+HRDL N +L+ +K+ DFGLAR + ++ +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 43 IGRGAYGIVCSA-VNSETKEEVAIKKITNAFDNRID--AKRILREIKLLCHMTHENIVKV 99
+G G +G+V VN+ T VA+KK+ D + ++ +EIK++ HEN+V++
Sbjct: 39 MGEGGFGVVYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT----DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
D D+ +VY M D + L+ G+ ++H
Sbjct: 96 LGFSSDGD-----DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTT 188
+ +HRD+K +N+LL+ KI DFGLAR +
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 183
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 19 QRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + + +Y +++T I L D Q +G+
Sbjct: 76 GYSTKPQLAIVTQWCEG---SSLYHHLHIIETKFEMI-----KLID-----IARQTAQGM 122
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 123 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR 161
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 19 QRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + + +Y +++T I L D Q +G+
Sbjct: 76 GYSTKPQLAIVTQWCEG---SSLYHHLHIIETKFEMI-----KLID-----IARQTAQGM 122
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 123 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR 161
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 43 IGRGAYGIVCSA-VNSETKEEVAIKKITNAFDNRID--AKRILREIKLLCHMTHENIVKV 99
+G G +G+V VN+ T VA+KK+ D + ++ +EIK++ HEN+V++
Sbjct: 39 MGEGGFGVVYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT----DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
D D+ +VY M D + L+ G+ ++H
Sbjct: 96 LGFSSDGD-----DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTT 188
+ +HRD+K +N+LL+ KI DFGLAR +
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 183
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 32 VSSKYVPPLQPIGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDA-KRILREIKL 87
+ K + L+ +G G++G+V S VA+K + ++ +A +RE+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 88 LCHMTHENIVKVKDII--PPMDKEKFNDVYIVYEL--MDTDLHQIIRSKQALTDDHCQYF 143
+ + H N++++ ++ PPM +V EL + + L ++ + + +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK--------MVTELAPLGSLLDRLRKHQGHFLLGTLSRY 116
Query: 144 LYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
Q+ G+ Y+ S +HRDL NLLL +KI DFGL R + D
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 43 IGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IGRG +G V N K A+K + N + + + L E ++ +H N++ +
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSAN 158
I + + + + ++ + DL IR++ T F Q+ +G+KY+ S
Sbjct: 94 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 150
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT 195
+HRDL N +L+ +K+ DFGLAR + ++ +
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 187
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 40 LQPIGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHEN 95
L+ +G G++G+V S VA+K + ++ +A +RE+ + + H N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 96 IVKVKDII--PPMDKEKFNDVYIVYEL--MDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
++++ ++ PPM +V EL + + L ++ + + + Q+ G+
Sbjct: 73 LIRLYGVVLTPPMK--------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 124
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
Y+ S +HRDL NLLL +KI DFGL R + D
Sbjct: 125 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 14 QRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + + +Y +++T I L D Q +G+
Sbjct: 71 GYSTKPQLAIVTQWCEG---SSLYHHLHIIETKFEMI-----KLID-----IARQTAQGM 117
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR 156
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 40 LQPIGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHEN 95
L+ +G G++G+V S VA+K + ++ +A +RE+ + + H N
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 96 IVKVKDII--PPMDKEKFNDVYIVYEL--MDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
++++ ++ PPM +V EL + + L ++ + + + Q+ G+
Sbjct: 77 LIRLYGVVLTPPMK--------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 128
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
Y+ S +HRDL NLLL +KI DFGL R + D
Sbjct: 129 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 40 LQPIGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHEN 95
L+ +G G++G+V S VA+K + ++ +A +RE+ + + H N
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 96 IVKVKDII--PPMDKEKFNDVYIVYEL--MDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
++++ ++ PPM +V EL + + L ++ + + + Q+ G+
Sbjct: 73 LIRLYGVVLTPPMK--------MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 124
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
Y+ S +HRDL NLLL +KI DFGL R + D
Sbjct: 125 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 43 IGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
IGRG +G V N K A+K + N + + + L E ++ +H N++ +
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALTDDHCQYFLYQLLRGLKYIHSAN 158
I + + + + ++ + DL IR++ T F Q+ +G+K++ S
Sbjct: 156 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
+HRDL N +L+ +K+ DFGLAR + +F
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 16 QRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + + +Y +++T I L D Q +G+
Sbjct: 73 GYSTKPQLAIVTQWCEG---SSLYHHLHIIETKFEMI-----KLID-----IARQTAQGM 119
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 120 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR 158
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 21 VQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRID 77
VQ+ ++G SS V + IGRG +G V N K A+K + N + +
Sbjct: 25 VQHVVIGP----SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGE 79
Query: 78 AKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALT 136
+ L E ++ +H N++ + I + + + + ++ + DL IR++ T
Sbjct: 80 VSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPT 136
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
F Q+ +G+K++ S +HRDL N +L+ +K+ DFGLAR + +F
Sbjct: 137 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 193
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+Q IG G +G+V K++VAIK I + + + + E +++ ++H +V++
Sbjct: 12 VQEIGSGQFGLVHLGYWL-NKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTD-LHQIIRSKQAL-TDDHCQYFLYQLLRGLKYIHSA 157
+ + +V+E M+ L +R+++ L + + G+ Y+ A
Sbjct: 68 YGVCLEQ-----APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+V+HRDL N L+ N +K+ DFG+ R
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTR 151
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 41 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + + +Y +++T I L D Q +G+
Sbjct: 98 GYSTKPQLAIVTQWCEG---SSLYHHLHIIETKFEMI-----KLID-----IARQTAQGM 144
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 145 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR 183
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 21 VQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRID 77
VQ+ ++G SS V + IGRG +G V N K A+K + N + +
Sbjct: 19 VQHVVIGP----SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGE 73
Query: 78 AKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALT 136
+ L E ++ +H N++ + I + + + + ++ + DL IR++ T
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPT 130
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
F Q+ +G+KY+ S +HRDL N +L+ +K+ DFGLAR
Sbjct: 131 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 43 IGRGAYGIV--CS--AVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVK 98
+G+G +G V C + T VA+K++ ++ ++ + REI++L + + IVK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFIVK 76
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY--QLLRGLKYIHS 156
+ + ++ +V E + + + + D + LY Q+ +G++Y+ S
Sbjct: 77 YRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+ + +KI DFGLA+
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAK 163
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 112/284 (39%), Gaps = 44/284 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMT-HENIVK 98
L+ IG G +G V V AIK+ +D + LRE+ + H ++V+
Sbjct: 14 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D + Y + + + R + + L Q+ RGL+YIHS +
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 159 VLHRDLKPSNLLL------NANCD-------------LKICDFG-LARTTS------ETD 192
++H D+KPSN+ + NA + KI D G + R +S ++
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 193
Query: 193 FMTEYVVTRWDTLFPGKD-YVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQ--LPHVP 249
F+ V+ T P D + LT++ P R+ + ++Q LP +P
Sbjct: 194 FLANEVLQENYTHLPKADIFALALTVVCAAGAEP------LPRNGDQWHEIRQGRLPRIP 247
Query: 250 KQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
Q SQ+F + V M+ DP +R + + H L S
Sbjct: 248 -QVLSQEFTELLKV-------MIHPDPERRPSAMALVKHSVLLS 283
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 43 IGRGAYGIVCSA-VNSETKEEVAIKKITNAFDNRID--AKRILREIKLLCHMTHENIVKV 99
+G G +G+V VN+ T VA+KK+ D + ++ +EIK++ HEN+V++
Sbjct: 33 MGEGGFGVVYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 100 KDIIPPMDKEKFNDVYIVYELMDT----DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIH 155
D D+ +VY M D + L+ G+ ++H
Sbjct: 90 LGFSSDGD-----DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 156 SANVLHRDLKPSNLLLNANCDLKICDFGLARTT 188
+ +HRD+K +N+LL+ KI DFGLAR +
Sbjct: 145 ENHHIHRDIKSANILLDEAFTAKISDFGLARAS 177
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 112/284 (39%), Gaps = 44/284 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMT-HENIVK 98
L+ IG G +G V V AIK+ +D + LRE+ + H ++V+
Sbjct: 14 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D + Y + + + R + + L Q+ RGL+YIHS +
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 159 VLHRDLKPSNLLL------NANCD-------------LKICDFG-LARTTS------ETD 192
++H D+KPSN+ + NA + KI D G + R +S ++
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 193
Query: 193 FMTEYVVTRWDTLFPGKD-YVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQ--LPHVP 249
F+ V+ T P D + LT++ P R+ + ++Q LP +P
Sbjct: 194 FLANEVLQENYTHLPKADIFALALTVVCAAGAEP------LPRNGDQWHEIRQGRLPRIP 247
Query: 250 KQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
Q SQ+F + V M+ DP +R + + H L S
Sbjct: 248 -QVLSQEFTELLKV-------MIHPDPERRPSAMALVKHSVLLS 283
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 42 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + + +Y +++T I L D Q +G+
Sbjct: 99 GYSTKPQLAIVTQWCEG---SSLYHHLHIIETKFEMI-----KLID-----IARQTAQGM 145
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 146 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR 184
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 112/284 (39%), Gaps = 44/284 (15%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMT-HENIVK 98
L+ IG G +G V V AIK+ +D + LRE+ + H ++V+
Sbjct: 12 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 71
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
D + Y + + + R + + L Q+ RGL+YIHS +
Sbjct: 72 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 131
Query: 159 VLHRDLKPSNLLL------NANCD-------------LKICDFG-LARTTS------ETD 192
++H D+KPSN+ + NA + KI D G + R +S ++
Sbjct: 132 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 191
Query: 193 FMTEYVVTRWDTLFPGKD-YVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQ--LPHVP 249
F+ V+ T P D + LT++ P R+ + ++Q LP +P
Sbjct: 192 FLANEVLQENYTHLPKADIFALALTVVXAAGAEP------LPRNGDQWHEIRQGRLPRIP 245
Query: 250 KQPFSQKFPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSS 293
Q SQ+F + V M+ DP +R + + H L S
Sbjct: 246 -QVLSQEFTELLKV-------MIHPDPERRPSAMALVKHSVLLS 281
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 21 VQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRID 77
VQ+ ++G SS V + IGRG +G V N K A+K + N + +
Sbjct: 21 VQHVVIGP----SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGE 75
Query: 78 AKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALT 136
+ L E ++ +H N++ + I + + + + ++ + DL IR++ T
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPT 132
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
F Q+ +G+K++ S +HRDL N +L+ +K+ DFGLAR + +F
Sbjct: 133 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 189
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT----NAFDNRIDAKRILREIKLLCHMT-HEN 95
+ +G GA+G V A +E A+ K+ + + + + ++ E+K++ H+ HEN
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 96 IVKVKDIIPPMDKEKFNDVYIVY-----------ELMDTDLHQIIRSKQALTDDHCQYFL 144
IV + Y Y +++TD I + T D +F
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD-LLHFS 170
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
Q+ +G+ ++ S N +HRD+ N+LL KI DFGLAR
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 21 VQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRID 77
VQ+ ++G SS V + IGRG +G V N K A+K + N + +
Sbjct: 20 VQHVVIGP----SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGE 74
Query: 78 AKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALT 136
+ L E ++ +H N++ + I + + + + ++ + DL IR++ T
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPT 131
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
F Q+ +G+K++ S +HRDL N +L+ +K+ DFGLAR + +F
Sbjct: 132 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 16/151 (10%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR----ILREIKLLCHMTHEN--- 95
IGRG +G V ++T + A+K + RI K+ L E +L ++ +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
IV + DK F + +LM+ DLH + ++ +++ +++ GL+++
Sbjct: 254 IVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLA 185
H+ V++RDLKP+N+LL+ + ++I D GLA
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 43 IGRGAYGIV--CS--AVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVK 98
+G+G +G V C + T VA+K++ ++ ++ + REI++L + + IVK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFIVK 75
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY--QLLRGLKYIHS 156
+ + ++ +V E + + + + D + LY Q+ +G++Y+ S
Sbjct: 76 YRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+ + +KI DFGLA+
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAK 162
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 112 NDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNL 169
++ I E MD L Q+++ + + +++GL Y+ + ++HRD+KPSN+
Sbjct: 139 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 198
Query: 170 LLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
L+N+ ++K+CDFG++ ++ +V TR
Sbjct: 199 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTR 229
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 16/151 (10%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR----ILREIKLLCHMTHEN--- 95
IGRG +G V ++T + A+K + RI K+ L E +L ++ +
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLSLVSTGDCPF 252
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
IV + DK F + +LM+ DLH + ++ +++ +++ GL+++
Sbjct: 253 IVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 307
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLA 185
H+ V++RDLKP+N+LL+ + ++I D GLA
Sbjct: 308 HNRFVVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 43 IGRGAYGIV--CS--AVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVK 98
+G+G +G V C + T VA+K++ ++ ++ + REI++L + + IVK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFIVK 88
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY--QLLRGLKYIHS 156
+ + ++ +V E + + + + D + LY Q+ +G++Y+ S
Sbjct: 89 YRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+ + +KI DFGLA+
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAK 175
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 16/151 (10%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR----ILREIKLLCHMTHEN--- 95
IGRG +G V ++T + A+K + RI K+ L E +L ++ +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
IV + DK F + +LM+ DLH + ++ +++ +++ GL+++
Sbjct: 254 IVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLA 185
H+ V++RDLKP+N+LL+ + ++I D GLA
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 16/151 (10%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKR----ILREIKLLCHMTHEN--- 95
IGRG +G V ++T + A+K + RI K+ L E +L ++ +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
IV + DK F + +LM+ DLH + ++ +++ +++ GL+++
Sbjct: 254 IVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLA 185
H+ V++RDLKP+N+LL+ + ++I D GLA
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 21 VQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRID 77
VQ+ ++G SS V + IGRG +G V N K A+K + N + +
Sbjct: 18 VQHVVIGP----SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGE 72
Query: 78 AKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALT 136
+ L E ++ +H N++ + I + + + + ++ + DL IR++ T
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPT 129
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
F Q+ +G+K++ S +HRDL N +L+ +K+ DFGLAR + +F
Sbjct: 130 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 186
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 21 VQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAV---NSETKEEVAIKKITNAFDNRID 77
VQ+ ++G SS V + IGRG +G V N K A+K + N + +
Sbjct: 21 VQHVVIGP----SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGE 75
Query: 78 AKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK-QALT 136
+ L E ++ +H N++ + I + + + + ++ + DL IR++ T
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPT 132
Query: 137 DDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
F Q+ +G+K++ S +HRDL N +L+ +K+ DFGLAR + +F
Sbjct: 133 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEF 189
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 42 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + + +Y +++T I L D Q +G+
Sbjct: 99 GYSTKPQLAIVTQWCEG---SSLYHHLHIIETKFEMI-----KLID-----IARQTAQGM 145
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 146 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSR 184
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 14 QRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + + +Y +++T I L D Q +G+
Sbjct: 71 GYSTKPQLAIVTQWCEG---SSLYHHLHIIETKFEMI-----KLID-----IARQTAQGM 117
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSR 156
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 112 NDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNL 169
++ I E MD L Q+++ + + +++GL Y+ + ++HRD+KPSN+
Sbjct: 104 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 163
Query: 170 LLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
L+N+ ++K+CDFG++ ++ +V TR
Sbjct: 164 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTR 194
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKIT----NAFDNRIDAKRILREIKLLCHMT-HENIV 97
+G GA+G V A +E A+ K+ + + + + ++ E+K++ H+ HENIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 98 KVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK----------------QALTDDHCQ 141
+ Y Y DL +R K + L+
Sbjct: 114 NLLGACTHGGPVLVITEYCCY----GDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 142 YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+F Q+ +G+ ++ S N +HRD+ N+LL KI DFGLAR
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 34 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + + +Y +++T I L D Q +G+
Sbjct: 91 GYSTKPQLAIVTQWCEG---SSLYHHLHIIETKFEMI-----KLID-----IARQTAQGM 137
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 190
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 138 DYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSR 176
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 30 QRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + H + S+ Q RG+
Sbjct: 87 GYSTAPQLAIVTQWCEGSSL-------------YHHLHASETKFEMKKLIDIARQTARGM 133
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS 189
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 134 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 18 QRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + H + S+ Q RG+
Sbjct: 75 GYSTKPQLAIVTQWCEGSSL-------------YHHLHASETKFEMKKLIDIARQTARGM 121
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS 189
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 122 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKS 159
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT----NAFDNRIDAKRILREIKLLCHMT-HEN 95
+ +G GA+G V A +E A+ K+ + + + + ++ E+K++ H+ HEN
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDH----------CQYFLY 145
IV + Y Y DL +R K D +F
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCY----GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
Q+ +G+ ++ S N +HRD+ N+LL KI DFGLAR
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 112 NDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNL 169
++ I E MD L Q+++ + + +++GL Y+ + ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 170 LLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
L+N+ ++K+CDFG++ ++ +V TR
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTR 167
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 112 NDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNL 169
++ I E MD L Q+++ + + +++GL Y+ + ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 170 LLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
L+N+ ++K+CDFG++ ++ +V TR
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTR 167
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 132 KQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
K LT +H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 194 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 41 QPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 93
Query: 95 NIVKV 99
N+V +
Sbjct: 94 NVVNL 98
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 112 NDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNL 169
++ I E MD L Q+++ + + +++GL Y+ + ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 170 LLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
L+N+ ++K+CDFG++ ++ +V TR
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTR 167
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 132 KQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
K LT +H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 185 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 41 QPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 26 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 84
Query: 95 NIVKV 99
N+V +
Sbjct: 85 NVVNL 89
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 78
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRS-KQALTDD---- 138
++ ++V++ ++ + ++ ELM DL +RS + A+ ++
Sbjct: 79 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 139 -----HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD+
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 132 KQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
K LT +H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 187 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 41 QPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 86
Query: 95 NIVKV 99
N+V +
Sbjct: 87 NVVNL 91
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 132 KQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
K LT +H + +Q+ +G++++ S +HRDL N+LL+ +KICDFGLAR
Sbjct: 192 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 246
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 41 QPIGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE- 94
+P+GRGA+G V A + T VA+K + + + + ++ E+K+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRALMSELKILIHIGHHL 91
Query: 95 NIVKV 99
N+V +
Sbjct: 92 NVVNL 96
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT----NAFDNRIDAKRILREIKLLCHMT-HEN 95
+ +G GA+G V A +E A+ K+ + + + + ++ E+K++ H+ HEN
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDH----------CQYFLY 145
IV + Y Y DL +R K D +F
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCY----GDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 146 QLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
Q+ +G+ ++ S N +HRD+ N+LL KI DFGLAR
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 112 NDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNL 169
++ I E MD L Q+++ + + +++GL Y+ + ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 170 LLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
L+N+ ++K+CDFG++ ++ +V TR
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTR 167
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 112 NDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNL 169
++ I E MD L Q+++ + + +++GL Y+ + ++HRD+KPSN+
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 170 LLNANCDLKICDFGLARTTSETDFMTEYVVTR 201
L+N+ ++K+CDFG++ ++ +V TR
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDS-MANSFVGTR 167
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+Q IG G +G+V K++VAIK I + + + + E +++ ++H +V++
Sbjct: 15 VQEIGSGQFGLVHLGYWL-NKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQL 70
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTD-LHQIIRSKQAL-TDDHCQYFLYQLLRGLKYIHSA 157
+ + +V+E M+ L +R+++ L + + G+ Y+ A
Sbjct: 71 YGVCLEQ-----APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
V+HRDL N L+ N +K+ DFG+ R
Sbjct: 126 CVIHRDLAARNCLVGENQVIKVSDFGMTR 154
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+Q IG G +G+V K++VAIK I + + + + E +++ ++H +V++
Sbjct: 10 VQEIGSGQFGLVHLGYWL-NKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTD-LHQIIRSKQAL-TDDHCQYFLYQLLRGLKYIHSA 157
+ + +V+E M+ L +R+++ L + + G+ Y+ A
Sbjct: 66 YGVCLEQ-----APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
V+HRDL N L+ N +K+ DFG+ R
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTR 149
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+Q IG G +G+V K++VAIK I + + + + E +++ ++H +V++
Sbjct: 12 VQEIGSGQFGLVHLGYWL-NKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTD-LHQIIRSKQAL-TDDHCQYFLYQLLRGLKYIHSA 157
+ + +V+E M+ L +R+++ L + + G+ Y+ A
Sbjct: 68 YGVCLEQ-----APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
V+HRDL N L+ N +K+ DFG+ R
Sbjct: 123 CVIHRDLAARNCLVGENQVIKVSDFGMTR 151
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 43 IGRGAYGIV--CS--AVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVK 98
+G+G +G V C + T VA+K++ ++ ++ + REI++L + + IVK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFIVK 72
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY--QLLRGLKYIHS 156
+ + + + +V E + + + + D + LY Q+ +G++Y+ S
Sbjct: 73 YRGVSYGPGRPELR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+HRDL N+L+ + +KI DFGLA+
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAK 159
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G+G +G V T A+K + + + + E ++L + H +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+K D+ F ++ +L + ++ T++ +++ +++ L+Y+HS +
Sbjct: 70 LKYAFQTHDRLCF----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLAR 186
V++RD+K NL+L+ + +KI DFGL +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G+G +G V T A+K + + + + E ++L + H +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+K D+ F ++ +L + ++ T++ +++ +++ L+Y+HS +
Sbjct: 70 LKYAFQTHDRLCF----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLAR 186
V++RD+K NL+L+ + +KI DFGL +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G+G +G V T A+K + + + + E ++L + H +
Sbjct: 15 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 74
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+K D+ F ++ +L + ++ T++ +++ +++ L+Y+HS +
Sbjct: 75 LKYAFQTHDRLCF----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 130
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLAR 186
V++RD+K NL+L+ + +KI DFGL +
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G+G +G V T A+K + + + + E ++L + H +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+K D+ F ++ +L + ++ T++ +++ +++ L+Y+HS +
Sbjct: 70 LKYAFQTHDRLCF----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLAR 186
V++RD+K NL+L+ + +KI DFGL +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G+G +G V T A+K + + + + E ++L + H +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+K D+ F ++ +L + ++ T++ +++ +++ L+Y+HS +
Sbjct: 70 LKYAFQTHDRLCF----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLAR 186
V++RD+K NL+L+ + +KI DFGL +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G+G +G V T A+K + + + + E ++L + H +
Sbjct: 13 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 72
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+K D+ F ++ +L + ++ T++ +++ +++ L+Y+HS +
Sbjct: 73 LKYAFQTHDRLCF----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 128
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLAR 186
V++RD+K NL+L+ + +KI DFGL +
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 10 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 68
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRS-KQALTDD---- 138
++ ++V++ ++ + ++ ELM DL +RS + A+ ++
Sbjct: 69 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 139 -----HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD+
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 183
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 41 QPIGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLCHM 91
Q IG G++G V + +VA+K + AF N + R R + +L M
Sbjct: 30 QRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 92 THENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGL 151
+ ++ + + H + S+ Q RG+
Sbjct: 87 GYSTKPQLAIVTQWCEGSSL-------------YHHLHASETKFEMKKLIDIARQTARGM 133
Query: 152 KYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS 189
Y+H+ +++HRDLK +N+ L+ + +KI DFGLA S
Sbjct: 134 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKI-TNAFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G+G +G V T A+K + + + + E ++L + H +
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSAN 158
+K D+ F ++ +L + ++ T++ +++ +++ L+Y+HS +
Sbjct: 70 LKYAFQTHDRLCF----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 159 VLHRDLKPSNLLLNANCDLKICDFGLAR 186
V++RD+K NL+L+ + +KI DFGL +
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 39/163 (23%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKIT---------NAFDNRIDAKRILREIKLLC---H 90
IG G++G V + +VA+K + AF N + R R + +L +
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 91 MTHENIVKVKDIIPPMDKEKFNDV----YIVYELMDTDLHQIIRSKQALTDDHCQYFLYQ 146
MT +N+ V K V + +++L+D I R Q
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID-----IAR---------------Q 140
Query: 147 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS 189
+G+ Y+H+ N++HRD+K +N+ L+ +KI DFGLA S
Sbjct: 141 TAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 78
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDH---- 139
++ ++V++ ++ + ++ ELM DL +RS + +++
Sbjct: 79 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 140 ------CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD+
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+Q IG G +G+V K++VAIK I + + + E +++ ++H +V++
Sbjct: 32 VQEIGSGQFGLVHLGYWL-NKDKVAIKTIK---EGSMSEDDFIEEAEVMMKLSHPKLVQL 87
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTD-LHQIIRSKQAL-TDDHCQYFLYQLLRGLKYIHSA 157
+ + +V+E M+ L +R+++ L + + G+ Y+ A
Sbjct: 88 YGVCLEQ-----APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
V+HRDL N L+ N +K+ DFG+ R
Sbjct: 143 CVIHRDLAARNCLVGENQVIKVSDFGMTR 171
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 13 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 71
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDH---- 139
++ ++V++ ++ + ++ ELM DL +RS + +++
Sbjct: 72 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 140 ------CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD+
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 7 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 65
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDH---- 139
++ ++V++ ++ + ++ ELM DL +RS + +++
Sbjct: 66 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 140 ------CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD+
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 14 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 72
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDH---- 139
++ ++V++ ++ + ++ ELM DL +RS + +++
Sbjct: 73 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 140 ------CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD+
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 187
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 11 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 69
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDH---- 139
++ ++V++ ++ + ++ ELM DL +RS + +++
Sbjct: 70 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 140 ------CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD+
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 184
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 13 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 71
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDH---- 139
++ ++V++ ++ + ++ ELM DL +RS + +++
Sbjct: 72 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 140 ------CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD+
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 114/294 (38%), Gaps = 47/294 (15%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITN----AFDNRIDAKRILREIKLLCHMT----HE 94
+G+G +G V + + +VAIK I + D+ E+ LL + H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 95 NIVKVKDIIPPMDKEKFNDVYIVYE--LMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLK 152
++++ D E +V E L DL I K L + + F Q++ ++
Sbjct: 99 GVIRLLDWF-----ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ 153
Query: 153 YIHSANVLHRDLKPSNLL--LNANCDLKICDFG---LARTTSETDF--MTEYVVTRWDT- 204
+ HS V+HRD+K N+L L C K+ DFG L TDF Y W +
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGC-AKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISR 212
Query: 205 ----LFPGKDYVQQLTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQKFPNM 260
P + + + + G D+ F R + ++ H P ++
Sbjct: 213 HQYHALPATVWSLGILLYDMVCG-----DIPFERD---QEILEAELHFPA--------HV 256
Query: 261 SPVAIDLAERMLVFDPAKRITVEEALNHPYLSSLHE---INEEPTCPYPFNFDF 311
SP L R L P+ R ++EE L P++ + E +N P P +
Sbjct: 257 SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGPAPLAWSL 310
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
++ +G+G++G V A ET + A+K + IL++ + C MT + I+ +
Sbjct: 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV--------ILQDDDVECTMTEKRILSL 79
Query: 100 KDIIPPMDK-----EKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + + + + ++ V E ++ DL I+ + + +++ +++ L +
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+H +++RDLK N+LL+ K+ DFG+ +
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 27 GNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREI 85
G + +V+ L+ +G+G +G V T A+K + + + L E
Sbjct: 1 GAMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 60
Query: 86 KLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLY 145
++L + H + +K D+ F ++ +L + ++ ++D +++
Sbjct: 61 RVLQNSRHPFLTALKYSFQTHDRLCF----VMEYANGGELFFHLSRERVFSEDRARFYGA 116
Query: 146 QLLRGLKYIHS-ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+++ L Y+HS NV++RDLK NL+L+ + +KI DFGL +
Sbjct: 117 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 42 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 100
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDH---- 139
++ ++V++ ++ + ++ ELM DL +RS + +++
Sbjct: 101 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 140 ------CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD+
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 215
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 22/179 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 14 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 72
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDH---- 139
++ ++V++ ++ + ++ ELM DL +RS + +++
Sbjct: 73 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 140 ------CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 186
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 22/179 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 5 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 63
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDH---- 139
++ ++V++ ++ + ++ ELM DL +RS + +++
Sbjct: 64 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 140 ------CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
++ G+ Y+++ +HRDL N ++ + +KI DFG+ R ETD
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L +G+G++G V + T E A+K + ++++ + C M + ++ +
Sbjct: 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDV--------VIQDDDVECTMVEKRVLAL 76
Query: 100 KDIIPPMDK-----EKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + + + + +Y V E ++ DL I+ + H ++ ++ GL +
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ S +++RDLK N++L++ +KI DFG+ +
Sbjct: 137 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQ+ RG++Y+ S +HRDL N+L+ + +KI DFGLAR D+
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 205
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQ+ RG++Y+ S +HRDL N+L+ + +KI DFGLAR D+
Sbjct: 150 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 198
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQ+ RG++Y+ S +HRDL N+L+ + +KI DFGLAR D+
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 205
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQ+ RG++Y+ S +HRDL N+L+ + +KI DFGLAR D+
Sbjct: 149 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 197
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQ+ RG++Y+ S +HRDL N+L+ + +KI DFGLAR D+
Sbjct: 146 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 194
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 85/178 (47%), Gaps = 31/178 (17%)
Query: 41 QPIGRGAYG--IVCSAVNSETKE-----EVAIKKITNAFDNRIDAKRILREIKLLCHMT- 92
+P+G GA+G ++ A+ + + +VA+K + + + D ++ E++++ +
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGK 92
Query: 93 HENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDHCQ---------- 141
H+NI+ + + +Y++ E +L + +++++ ++C
Sbjct: 93 HKNIINLLGAC-----TQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 142 ------YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQ+ RG++Y+ S +HRDL N+L+ + +KI DFGLAR D+
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 205
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 136/338 (40%), Gaps = 79/338 (23%)
Query: 26 LGNLFQVSSKYVPPLQPIGRGAYGIVCSAVN-SETKEEVAIKKITNAFDNRIDAKRILRE 84
+G+ Q + V L G G +G V V+ VA+K I N + +A R+ E
Sbjct: 27 VGDWLQERYEIVSTL---GEGTFGRVVQCVDHRRGGARVALKIIKNV-EKYKEAARL--E 80
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFND-VYIVYELMDTDLHQIIRSKQALTD--DHCQ 141
I +L + ++ + D ++ + I +EL+ ++ L +
Sbjct: 81 INVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVR 140
Query: 142 YFLYQLLRGLKYIHSANVLHRDLKPSNLL-LNANCDL------------------KICDF 182
+ +QL + +K++H + H DLKP N+L +N++ +L ++ DF
Sbjct: 141 HMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDF 200
Query: 183 GLARTTSETDFMTEYVVTR-------------------WD------------TLFPGKDY 211
G A T + + + V TR W TLF D
Sbjct: 201 GSA--TFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDN 258
Query: 212 VQQLTMITELLGSPDDSDL------------GFLRSD---NARRYVKQLPHVPKQPFSQK 256
+ L M+ +LG P S + G L D +A RYV++ ++ + +
Sbjct: 259 REHLAMMERILG-PIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSE 317
Query: 257 FPNMSPVAIDLAERMLVFDPAKRITVEEALNHPYLSSL 294
+ DL E ML ++PAKR+T+ EAL HP+ + L
Sbjct: 318 AEEHHQL-FDLIESMLEYEPAKRLTLGEALQHPFFARL 354
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQ+ RG++Y+ S +HRDL N+L+ + +KI DFGLAR D+
Sbjct: 198 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 246
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
YQ+ RG++Y+ S +HRDL N+L+ + +KI DFGLAR D+
Sbjct: 142 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 132 KQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
++ALT F +Q+ +G++Y+ +++HRDL N+L+ +KI DFGL+R E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 192 D 192
D
Sbjct: 204 D 204
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 44 GRGAYGIVCSA-VNSETKEEVAIKKITNAFDNRID--AKRILREIKLLCHMTHENIVKVK 100
G G +G+V VN+ T VA+KK+ D + ++ +EIK+ HEN+V++
Sbjct: 31 GEGGFGVVYKGYVNNTT---VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELL 87
Query: 101 DIIPPMDKEKFNDVYIVY------ELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
D D+ +VY L+D L + + C+ G+ ++
Sbjct: 88 GFSSDGD-----DLCLVYVYXPNGSLLDR-LSCLDGTPPLSWHXRCK-IAQGAANGINFL 140
Query: 155 HSANVLHRDLKPSNLLLNANCDLKICDFGLARTT 188
H + +HRD+K +N+LL+ KI DFGLAR +
Sbjct: 141 HENHHIHRDIKSANILLDEAFTAKISDFGLARAS 174
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G+G +G V T A+K + + + L E ++L + H +
Sbjct: 15 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 74
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS-A 157
+K D+ F ++ +L + ++ ++D +++ +++ L Y+HS
Sbjct: 75 LKYSFQTHDRLCF----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
NV++RDLK NL+L+ + +KI DFGL +
Sbjct: 131 NVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 30 FQVSSKYVPPLQPIGRGAYGIVCSAV-----NSETKEEVAIKKITNAFDNRIDAKRILRE 84
++V+ + + + +G+G++G+V V E + VAIK + A R + L E
Sbjct: 7 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNE 65
Query: 85 IKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMD-TDLHQIIRSKQALTDDH---- 139
++ ++V++ ++ + ++ ELM DL +RS + +++
Sbjct: 66 ASVMKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 140 ------CQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
++ G+ Y+++ +HRDL N + + +KI DFG+ R ETD+
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 24 NILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKIT--NAFDNRIDAKRI 81
N+ V + L+ IG G V +N E K+ AIK + A + +D+ R
Sbjct: 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYR- 74
Query: 82 LREIKLLCHMTHENIVKVKDIIPPMDKEKFND-VYIVYELMDTDLHQIIRSKQALTDDHC 140
EI L + + II D E + +Y+V E + DL+ ++ K+++
Sbjct: 75 -NEIAYLNKLQQHS----DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER 129
Query: 141 QYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA 185
+ + +L + IH ++H DLKP+N L+ + LK+ DFG+A
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA 173
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+Q IG G +G+V K++VAIK I + + + + E +++ ++H +V++
Sbjct: 13 VQEIGSGQFGLVHLGYWL-NKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQL 68
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTD-LHQIIRSKQAL-TDDHCQYFLYQLLRGLKYIHSA 157
+ + +V E M+ L +R+++ L + + G+ Y+ A
Sbjct: 69 YGVCLEQ-----APICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
V+HRDL N L+ N +K+ DFG+ R
Sbjct: 124 CVIHRDLAARNCLVGENQVIKVSDFGMTR 152
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G+G +G V T A+K + + + L E ++L + H +
Sbjct: 13 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 72
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS-A 157
+K D+ F ++ +L + ++ ++D +++ +++ L Y+HS
Sbjct: 73 LKYSFQTHDRLCF----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 128
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
NV++RDLK NL+L+ + +KI DFGL +
Sbjct: 129 NVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L +G+G++G V + T E A+K + ++++ + C M + ++ +
Sbjct: 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDV--------VIQDDDVECTMVEKRVLAL 397
Query: 100 KDIIPPMDK-----EKFNDVYIVYELMDT-DLHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
P + + + + +Y V E ++ DL I+ + H ++ ++ GL +
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ S +++RDLK N++L++ +KI DFG+ +
Sbjct: 458 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT--NAFDNRIDAKRILREIKLLCHMTHENIV 97
L+ IG G V +N E K+ AIK + A + +D+ R EI L + +
Sbjct: 33 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQHS-- 87
Query: 98 KVKDIIPPMDKEKFND-VYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
II D E + +Y+V E + DL+ ++ K+++ + + +L + IH
Sbjct: 88 --DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLA 185
++H DLKP+N L+ + LK+ DFG+A
Sbjct: 146 HGIVHSDLKPANFLI-VDGMLKLIDFGIA 173
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G+G +G V T A+K + + + L E ++L + H +
Sbjct: 156 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 215
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS-A 157
+K D+ F ++ +L + ++ ++D +++ +++ L Y+HS
Sbjct: 216 LKYSFQTHDRLCF----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 271
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
NV++RDLK NL+L+ + +KI DFGL +
Sbjct: 272 NVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 132 KQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
++ALT F +Q+ +G++Y+ ++HRDL N+L+ +KI DFGL+R E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 192 D 192
D
Sbjct: 204 D 204
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 132 KQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSET 191
++ALT F +Q+ +G++Y+ ++HRDL N+L+ +KI DFGL+R E
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 192 D 192
D
Sbjct: 204 D 204
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITN-AFDNRIDAKRILREIKLLCHMTHENIVK 98
L+ +G+G +G V T A+K + + + L E ++L + H +
Sbjct: 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 212
Query: 99 VKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS-A 157
+K D+ F ++ +L + ++ ++D +++ +++ L Y+HS
Sbjct: 213 LKYSFQTHDRLCF----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 268
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLAR 186
NV++RDLK NL+L+ + +KI DFGL +
Sbjct: 269 NVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVKVKD 101
+GRG +G V + T + A KK+ + + + E K+L + IV +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 102 IIPPMDKEKFNDVYIVYELMDTD-----LHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
E D+ +V +M+ ++ + + ++ Q++ GL+++H
Sbjct: 253 AF-----ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLA 185
N+++RDLKP N+LL+ + +++I D GLA
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 22/162 (13%)
Query: 43 IGRGAYGIVCSA--VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE-NIVKV 99
IG G +G V A + + AIK++ + ++ D + E+++LC + H NI+
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNII-- 89
Query: 100 KDIIPPMDKEKFNDVYIVY-------------ELMDTDLHQIIRSKQA--LTDDHCQYFL 144
+++ + + + I Y +++TD I + A L+ +F
Sbjct: 90 -NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ RG+ Y+ +HRDL N+L+ N KI DFGL+R
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVKVKD 101
+GRG +G V + T + A KK+ + + + E K+L + IV +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 102 IIPPMDKEKFNDVYIVYELMDTD-----LHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
E D+ +V +M+ ++ + + ++ Q++ GL+++H
Sbjct: 253 AF-----ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLA 185
N+++RDLKP N+LL+ + +++I D GLA
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDA-KRILREIKLLCHMTHENIVKVKD 101
+GRG +G V + T + A KK+ + + + E K+L + IV +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 102 IIPPMDKEKFNDVYIVYELMDTD-----LHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
E D+ +V +M+ ++ + + ++ Q++ GL+++H
Sbjct: 253 AF-----ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLA 185
N+++RDLKP N+LL+ + +++I D GLA
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT--NAFDNRIDAKRILREIKLLCHMTHENIV 97
L+ IG G V +N E K+ AIK + A + +D+ R EI L + +
Sbjct: 14 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQHS-- 68
Query: 98 KVKDIIPPMDKEKFND-VYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
II D E + +Y+V E + DL+ ++ K+++ + + +L + IH
Sbjct: 69 --DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLA 185
++H DLKP+N L+ + LK+ DFG+A
Sbjct: 127 HGIVHSDLKPANFLI-VDGMLKLIDFGIA 154
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 22/162 (13%)
Query: 43 IGRGAYGIVCSA--VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHE-NIVKV 99
IG G +G V A + + AIK++ + ++ D + E+++LC + H NI+
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNII-- 79
Query: 100 KDIIPPMDKEKFNDVYIVY-------------ELMDTDLHQIIRSKQA--LTDDHCQYFL 144
+++ + + + I Y +++TD I + A L+ +F
Sbjct: 80 -NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ RG+ Y+ +HRDL N+L+ N KI DFGL+R
Sbjct: 139 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT--NAFDNRIDAKRILREIKLLCHMTHENIV 97
L+ IG G V +N E K+ AIK + A + +D+ R EI L + +
Sbjct: 61 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQHS-- 115
Query: 98 KVKDIIPPMDKEKFND-VYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
II D E + +Y+V E + DL+ ++ K+++ + + +L + IH
Sbjct: 116 --DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLA 185
++H DLKP+N L+ + LK+ DFG+A
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGIA 201
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT--NAFDNRIDAKRILREIKLLCHMTHENIV 97
L+ IG G V +N E K+ AIK + A + +D+ R EI L + +
Sbjct: 61 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQHS-- 115
Query: 98 KVKDIIPPMDKEKFND-VYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
II D E + +Y+V E + DL+ ++ K+++ + + +L + IH
Sbjct: 116 --DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLA 185
++H DLKP+N L+ + LK+ DFG+A
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGIA 201
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT--NAFDNRIDAKRILREIKLLCHMTHENIV 97
L+ IG G V +N E K+ AIK + A + +D+ R EI L + +
Sbjct: 17 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQHS-- 71
Query: 98 KVKDIIPPMDKEKFND-VYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
II D E + +Y+V E + DL+ ++ K+++ + + +L + IH
Sbjct: 72 --DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 129
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLA 185
++H DLKP+N L+ + LK+ DFG+A
Sbjct: 130 HGIVHSDLKPANFLI-VDGMLKLIDFGIA 157
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT--NAFDNRIDAKRILREIKLLCHMTHENIV 97
L+ IG G V +N E K+ AIK + A + +D+ R EI L + +
Sbjct: 61 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQHS-- 115
Query: 98 KVKDIIPPMDKEKFND-VYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
II D E + +Y+V E + DL+ ++ K+++ + + +L + IH
Sbjct: 116 --DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLA 185
++H DLKP+N L+ + LK+ DFG+A
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGIA 201
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
L+ +G G +G+V + + +VA+K I + + +E + + ++H +VK
Sbjct: 13 LKELGSGQFGVV-KLGKWKGQYDVAVKMIK---EGSMSEDEFFQEAQTMMKLSHPKLVKF 68
Query: 100 KDIIPPMDKEKFNDVYIVYELMDTD-LHQIIRS-KQALTDDHCQYFLYQLLRGLKYIHSA 157
+ K +YIV E + L +RS + L Y + G+ ++ S
Sbjct: 69 YGVC-----SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH 123
Query: 158 NVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMT 195
+HRDL N L++ + +K+ DFG+ R + +++
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 40 LQPIGRGAYGIVCSAVNSETKEEVAIKKIT--NAFDNRIDAKRILREIKLLCHMTHENIV 97
L+ IG G V +N E K+ AIK + A + +D+ R EI L + +
Sbjct: 13 LKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQHS-- 67
Query: 98 KVKDIIPPMDKEKFND-VYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
II D E + +Y+V E + DL+ ++ K+++ + + +L + IH
Sbjct: 68 --DKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLA 185
++H DLKP+N L+ + LK+ DFG+A
Sbjct: 126 HGIVHSDLKPANFLI-VDGMLKLIDFGIA 153
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 34/44 (77%)
Query: 142 YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA 185
++ Q++ GL+++H N+++RDLKP N+LL+ + +++I D GLA
Sbjct: 293 FYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 117/295 (39%), Gaps = 68/295 (23%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMT-HENIVKVKD 101
+G G+ G V S VA+K++ F L EIKLL H N+++
Sbjct: 23 LGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRY-- 74
Query: 102 IIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQY--------FLYQLLRGLKY 153
++F +YI EL + +L ++ SK ++D++ + L Q+ G+ +
Sbjct: 75 -YCSETTDRF--LYIALELCNLNLQDLVESKN-VSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 154 IHSANVLHRDLKPSNLLLNA-------------NCDLKICDFGLART--TSETDFMTEYV 198
+HS ++HRDLKP N+L++ N + I DFGL + + ++ F T
Sbjct: 131 LHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 199 VTRWDTLFPGKDYVQQ---LTMITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPFSQ 255
+ + + +++ L L S D +G + + K PF
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV--------FYYILSKGKHPFGD 242
Query: 256 KFPNMSPV---------------------AIDLAERMLVFDPAKRITVEEALNHP 289
K+ S + A DL +M+ DP KR T + L HP
Sbjct: 243 KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 145 YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
YQ+ RG++Y+ S +HRDL N+L+ + +KI DFGLAR D
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 111/269 (41%), Gaps = 57/269 (21%)
Query: 61 EEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYEL 120
++++IK + F N + +I+ +IK +T E I+ +++VYI+YE
Sbjct: 79 DKISIKSKYDDFKNEL---QIITDIKNEYCLTCEGII-----------TNYDEVYIIYEY 124
Query: 121 MDTDLHQIIRSKQALTDDHCQYFL---------YQLLRGLKYIHS-ANVLHRDLKPSNLL 170
M+ D + D + F+ +L YIH+ N+ HRD+KPSN+L
Sbjct: 125 MENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL 184
Query: 171 LNANCDLKICDFG---------LARTTSETDFMTEYVVTRWDTLFPGKDYVQQLTM---- 217
++ N +K+ DFG + + +FM + + K + L +
Sbjct: 185 MDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYV 244
Query: 218 -------------ITELLGSPDDSDLGFLRSDNARRYVKQLPHVPKQPF-SQKFPNMSPV 263
+ EL + ++ + N Y P K+ S F +S
Sbjct: 245 MFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLY----PLTNKKSTCSNNF--LSNE 298
Query: 264 AIDLAERMLVFDPAKRITVEEALNHPYLS 292
ID + L +PA+RIT E+AL H +L+
Sbjct: 299 DIDFLKLFLRKNPAERITSEDALKHEWLA 327
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 39/175 (22%)
Query: 26 LGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIK-----------KITNAFDN 74
+GN +++ K IG G++G + N + EEVAIK I + F
Sbjct: 7 VGNKYRLGRK-------IGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYK 59
Query: 75 RIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQA 134
+ + IK C + V V +++ P ++ FN + L L
Sbjct: 60 MMQGGVGIPSIKW-CGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLL--------- 109
Query: 135 LTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCD---LKICDFGLAR 186
L D Q++ ++YIHS N +HRD+KP N L+ + I DFGLA+
Sbjct: 110 LAD--------QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 26 LGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREI 85
+GN F++ K IG G++G + N +T EEVAIK + N + ++L E
Sbjct: 5 VGNKFRLGRK-------IGSGSFGEIYLGTNIQTNEEVAIK-LENV---KTKHPQLLYES 53
Query: 86 KLLCHMTHENIVKVKDIIPPMDKEKFNDVY--IVYELMDTDLHQIIR-SKQALTDDHCQY 142
K+ I++ IP + Y +V +L+ L + + L+
Sbjct: 54 KIY------RILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLM 107
Query: 143 FLYQLLRGLKYIHSANVLHRDLKPSNLLLN----ANCDLKICDFGLARTTSET 191
Q++ ++++HS + LHRD+KP N L+ AN + I DFGLA+ +T
Sbjct: 108 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRAN-QVYIIDFGLAKKYRDT 159
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 24 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 82
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 83 VCRLLGIC------LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 169
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 149 RGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETD 192
RGL Y+H+ ++HRD+K N+LL+ N KI DFG+++ +E D
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 21 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 79
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 80 VCRLLGIC------LTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 81
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 82 VCRLLGIC------LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 45 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 103
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 104 VCRLLGIC------LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 190
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 43 IGRGAYGIVCSA---VNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G G +G V T +VA+K + ++ + + L E + +H N++++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 100 KDIIPPMDKEKFNDVYIVYELMD-TDLHQ-IIRSKQALTDDHCQY-----FLYQLLRGLK 152
+ M + ++ M DLH ++ S+ H F+ + G++
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 153 YIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
Y+ + N LHRDL N +L + + + DFGL++ D+
Sbjct: 162 YLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 80
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 81 VCRLLGIC------LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 21 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 79
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 80 VCRLLGIC------LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 23/161 (14%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRI------LREIKLLCHMTHENI 96
IG+G +G+V + K VAIK + D+ + + I RE+ ++ ++ H NI
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILG-DSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 97 VKVKDII--PPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYI 154
VK+ ++ PP +F +Y + H I S + + + G++Y+
Sbjct: 86 VKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL-------RLMLDIALGIEYM 138
Query: 155 HSAN--VLHRDLKPSNLLL-----NANCDLKICDFGLARTT 188
+ N ++HRDL+ N+ L NA K+ DFGL++ +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS 179
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 81
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 82 VCRLLGIC------LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 78
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 79 VCRLLGIC------LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 78
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 79 VCRLLGIC------LTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 69/321 (21%)
Query: 17 GGKYVQYNILGNL--FQVSSK-YVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFD 73
GGK + + + N+ F+ S K V + +G G+ G V S VA+K++ F
Sbjct: 12 GGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF- 69
Query: 74 NRIDAKRILREIKLLCHMT-HENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK 132
L EIKLL H N+++ ++F +YI EL + +L ++ SK
Sbjct: 70 ----CDIALMEIKLLTESDDHPNVIRY---YCSETTDRF--LYIALELCNLNLQDLVESK 120
Query: 133 QALTDDHCQY--------FLYQLLRGLKYIHSANVLHRDLKPSNLLLNA----------- 173
++D++ + L Q+ G+ ++HS ++HRDLKP N+L++
Sbjct: 121 N-VSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTG 179
Query: 174 --NCDLKICDFGLART--TSETDFMTEYVVTRWDTLFPGKDYVQQLTMITELLGSPDDSD 229
N + I DFGL + + + F + + + +++ T L S D
Sbjct: 180 AENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTK-RRLTRSIDIFS 238
Query: 230 LGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPV---------------------AIDLA 268
+G + + K PF K+ S + A DL
Sbjct: 239 MGCV--------FYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLI 290
Query: 269 ERMLVFDPAKRITVEEALNHP 289
+M+ DP KR T + L HP
Sbjct: 291 SQMIDHDPLKRPTAMKVLRHP 311
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 43 IGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDN-RIDAKRILREIKLLCHMTHENI 96
+G GA+G V A + + K VA+K + A ++ R D +R E +LL + H++I
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 105
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQA---------------LTDDHC 140
V+ + + + +V+E M DL++ +RS L
Sbjct: 106 VRFFGVC-----TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160
Query: 141 QYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
Q+ G+ Y+ + +HRDL N L+ +KI DFG++R TD+
Sbjct: 161 LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 213
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 69/321 (21%)
Query: 17 GGKYVQYNILGNL--FQVSSK-YVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFD 73
GGK + + + N+ F+ S K V + +G G+ G V S VA+K++ F
Sbjct: 12 GGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF- 69
Query: 74 NRIDAKRILREIKLLCHMT-HENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK 132
L EIKLL H N+++ ++F +YI EL + +L ++ SK
Sbjct: 70 ----CDIALMEIKLLTESDDHPNVIRY---YCSETTDRF--LYIALELCNLNLQDLVESK 120
Query: 133 QALTDDHCQY--------FLYQLLRGLKYIHSANVLHRDLKPSNLLLNA----------- 173
++D++ + L Q+ G+ ++HS ++HRDLKP N+L++
Sbjct: 121 N-VSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTG 179
Query: 174 --NCDLKICDFGLART--TSETDFMTEYVVTRWDTLFPGKDYVQQLTMITELLGSPDDSD 229
N + I DFGL + + + F + + + +++ T L S D
Sbjct: 180 AENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTK-RRLTRSIDIFS 238
Query: 230 LGFLRSDNARRYVKQLPHVPKQPFSQKFPNMSPV---------------------AIDLA 268
+G + + K PF K+ S + A DL
Sbjct: 239 MGCV--------FYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLI 290
Query: 269 ERMLVFDPAKRITVEEALNHP 289
+M+ DP KR T + L HP
Sbjct: 291 SQMIDHDPLKRPTAMKVLRHP 311
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 81
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 82 VCRLLGIC------LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 80
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 81 VCRLLGIC------LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIK---KITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G GA+G V + E V I KI N + E ++ M H ++V++
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 100 KDI-IPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
+ + P + +V +LM L + K + + Q+ +G+ Y+
Sbjct: 106 LGVCLSP-------TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 158
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
++HRDL N+L+ + +KI DFGLAR
Sbjct: 159 RRLVHRDLAARNVLVKSPNHVKITDFGLAR 188
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 81
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 82 VCRLLGIC------LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 78
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 79 VCRLLGIC------LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 26 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 84
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 85 VCRLLGIC------LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 171
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 27 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 85
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 86 VCRLLGIC------LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIK---KITNAFDNRIDAKRILREIKLLCHMTHENIVKV 99
+G GA+G V + E V I KI N + E ++ M H ++V++
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 100 KDI-IPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKYIHS 156
+ + P + +V +LM L + K + + Q+ +G+ Y+
Sbjct: 83 LGVCLSPT-------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 135
Query: 157 ANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
++HRDL N+L+ + +KI DFGLAR
Sbjct: 136 RRLVHRDLAARNVLVKSPNHVKITDFGLAR 165
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 30 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 88
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 89 VCRLLGIC------LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 175
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 43 IGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDN-RIDAKRILREIKLLCHMTHENI 96
+G GA+G V A + + K VA+K + A ++ R D +R E +LL + H++I
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 82
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQA---------------LTDDHC 140
V+ + + + +V+E M DL++ +RS L
Sbjct: 83 VRFFGVC-----TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 137
Query: 141 QYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
Q+ G+ Y+ + +HRDL N L+ +KI DFG++R TD+
Sbjct: 138 LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 190
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 43 IGRGAYGIVCSA-----VNSETKEEVAIKKITNAFDN-RIDAKRILREIKLLCHMTHENI 96
+G GA+G V A + + K VA+K + A ++ R D +R E +LL + H++I
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 76
Query: 97 VKVKDIIPPMDKEKFNDVYIVYELM-DTDLHQIIRSKQA---------------LTDDHC 140
V+ + + + +V+E M DL++ +RS L
Sbjct: 77 VRFFGVC-----TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 131
Query: 141 QYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDF 193
Q+ G+ Y+ + +HRDL N L+ +KI DFG++R TD+
Sbjct: 132 LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 184
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 40 LQPIGRGAYGIVCSAV----NSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHEN 95
++ +G GA+G V + + K VAIK++ A + + K IL E ++ + + +
Sbjct: 14 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAYVMASVDNPH 72
Query: 96 IVKVKDIIPPMDKEKFNDVYIVYELMDTD--LHQIIRSKQALTDDHCQYFLYQLLRGLKY 153
+ ++ I + V ++ +LM L + K + + + Q+ +G+ Y
Sbjct: 73 VCRLLGICLT------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 154 IHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+ ++HRDL N+L+ +KI DFGLA+
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK 159
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 32/172 (18%)
Query: 43 IGRGAYGIVCSAVNSETKEEVAIKKIT----NAFDNRIDAKRILREIKLLCHMT-HENIV 97
+G GA+G V A +E A+ K+ + + + + ++ E+K++ H+ HENIV
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 98 KVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSK---------------QALTDDHCQ- 141
+ Y Y DL +R K + L + +
Sbjct: 99 NLLGACTHGGPVLVITEYCCY----GDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 142 -------YFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 186
+F Q+ +G+ ++ S N +HRD+ N+LL KI DFGLAR
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,218,810
Number of Sequences: 62578
Number of extensions: 423656
Number of successful extensions: 3641
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 877
Number of HSP's gapped (non-prelim): 1539
length of query: 339
length of database: 14,973,337
effective HSP length: 99
effective length of query: 240
effective length of database: 8,778,115
effective search space: 2106747600
effective search space used: 2106747600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)