BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042687
(217 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/216 (93%), Positives = 211/216 (97%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV+AEDA++LAEKEGLSFLETSALEA N+EKAFQ+ILLDIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRAVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
ALAAQEAA+STGLPQGTTINVANLSGNV + CC+N
Sbjct: 181 ALAAQEAANSTGLPQGTTINVANLSGNVNKRPCCTN 216
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/216 (93%), Positives = 209/216 (96%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNK+DLNHLRAV+AEDAQ+LAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
ALAAQEA S+ GLP GTTINVAN+SGN ++CCSN
Sbjct: 181 ALAAQEATSNPGLPHGTTINVANISGNYNKRSCCSN 216
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/216 (92%), Positives = 206/216 (95%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVDHEYDYLFK+VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAYKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV+ EDAQ LAE+EGLSFLETSALEA NVEKAFQTIL DIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
ALAAQEA SSTGLPQGTTINV+N+S N ++CCSN
Sbjct: 181 ALAAQEANSSTGLPQGTTINVSNMSSNAGNRSCCSN 216
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/216 (92%), Positives = 207/216 (95%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCL+SKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+AGNKSDLNHLR+V+AEDAQ LAEKEGLSFLETSALEA NVEKAFQTILLDIY IISKK
Sbjct: 121 MLAGNKSDLNHLRSVSAEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
AL AQEAA+STGLPQGTTI +ANLS N+ +ACCSN
Sbjct: 181 ALTAQEAANSTGLPQGTTITIANLSSNINKRACCSN 216
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/217 (91%), Positives = 208/217 (95%), Gaps = 1/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA+KVDHEYDYLFK+VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAFKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV+ EDAQ LAE+EGLSFLETSALEA NV+KAFQTIL DIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVDKAFQTILFDIYHIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKG-KACCSN 216
ALAAQEA SSTGLPQGTTINV+N++GN G ++CCSN
Sbjct: 181 ALAAQEATSSTGLPQGTTINVSNMAGNAGGNRSCCSN 217
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/216 (92%), Positives = 207/216 (95%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+AGNK+DLNHLR+V+AEDAQ+LAEKE LS LETSALEA NVEKAFQTILLDIY IISKK
Sbjct: 121 MLAGNKTDLNHLRSVSAEDAQMLAEKECLSCLETSALEASNVEKAFQTILLDIYQIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
ALAAQEAA+STGLPQGTTIN+ NLS N+ KACCSN
Sbjct: 181 ALAAQEAANSTGLPQGTTINIGNLSTNINKKACCSN 216
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/215 (92%), Positives = 205/215 (95%), Gaps = 1/215 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV+ +DAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
ALAAQEAA S LP GTTINV +LSGN+ + CCS
Sbjct: 181 ALAAQEAA-SINLPHGTTINVGDLSGNMNKRTCCS 214
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/216 (90%), Positives = 205/216 (94%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVY +TKRQTF+NV RWLRELRDHAD+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYGMTKRQTFENVQRWLRELRDHADANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV++EDAQ LAEKE LSFLETSALEALNVEKAFQTIL DIY IIS+K
Sbjct: 121 MMAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
ALAAQEAAS+T LP GTTINV+NLS NV+ K CCSN
Sbjct: 181 ALAAQEAASTTSLPHGTTINVSNLSSNVEKKTCCSN 216
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/215 (92%), Positives = 204/215 (94%), Gaps = 1/215 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNE CLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV+ +DAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
ALAAQEAA S LP GTTINV +LSGN+ + CCS
Sbjct: 181 ALAAQEAA-SINLPHGTTINVGDLSGNMNKRTCCS 214
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/216 (89%), Positives = 207/216 (95%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVD+EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT+QVEGKT
Sbjct: 1 MAYKVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+AGNKSDLNHLRAV+++DAQ LAEKE LSFLETSALEALNVEKAFQTIL DIY IISKK
Sbjct: 121 MLAGNKSDLNHLRAVSSDDAQNLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
ALAAQE+AS+T +P GTTINV+N+SG V+ K+CCSN
Sbjct: 181 ALAAQESASTTSVPHGTTINVSNMSGTVEKKSCCSN 216
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/217 (89%), Positives = 205/217 (94%), Gaps = 1/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV+ +DAQ LAE+E LSFLETSALEA NVEKAFQTIL DIY I+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSTDDAQNLAEREALSFLETSALEAFNVEKAFQTILFDIYQIMSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGK-ACCSN 216
ALAAQ AAS+T LP GTTINV+N+SG+V+ K ACCSN
Sbjct: 181 ALAAQGAASTTSLPHGTTINVSNMSGSVEKKSACCSN 217
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/208 (94%), Positives = 200/208 (96%), Gaps = 1/208 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV+ +DAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNV 208
ALAAQEAA S LP GTTINV +LSG V
Sbjct: 181 ALAAQEAA-SINLPHGTTINVGDLSGTV 207
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/216 (89%), Positives = 203/216 (93%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA+KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV+GKT
Sbjct: 1 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
+MAGNKSDLNHLRAVA ED Q LAE+E LSFLETSALEA NVEKAFQTIL +IYHIISKK
Sbjct: 121 LMAGNKSDLNHLRAVAEEDGQALAERESLSFLETSALEATNVEKAFQTILTEIYHIISKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEAA ++ LP QGTTINVA+ SGN K ++CCS
Sbjct: 181 ALAAQEAAGNSTLPGQGTTINVADTSGNTK-RSCCS 215
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/216 (87%), Positives = 201/216 (93%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDL+HLRAV+ +D Q LAE+EGLSFLETSALEA N+EKAFQTIL +IYHI+SKK
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEAA T LP QGTTINV + SGN K + CCS
Sbjct: 181 ALAAQEAAVGTTLPGQGTTINVGDASGNTK-RGCCS 215
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/216 (87%), Positives = 200/216 (92%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV+GKT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGA LVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV ED LAEKEGLSFLETSALEA N+EKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
LAAQEAA+++ +P QGTTINVA+ SGN K K CCS
Sbjct: 181 TLAAQEAAANSTVPGQGTTINVADASGNTK-KGCCS 215
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/215 (87%), Positives = 200/215 (93%), Gaps = 1/215 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV+ +D Q LAEKEGLSFLETSALEA N+EKAFQTIL +IYHI+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
ALAAQEAA ++ QGTTINVA+ S N K + CCS
Sbjct: 181 ALAAQEAAGTSLPGQGTTINVADSSANTK-RGCCS 214
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/216 (87%), Positives = 201/216 (93%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDL+HLRAV+ +D Q LAE+EGLSFLETSALEA N+EKAFQTIL +IYHI+SKK
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEAA T LP QGTTINV + SGN K + CCS
Sbjct: 181 ALAAQEAAVGTILPGQGTTINVGDASGNTK-RGCCS 215
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/216 (87%), Positives = 200/216 (92%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV+ +D L+EKEGLSFLETSALEA N+EKAFQTIL +IYHI+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEA + +P QGTTINVA+ SGN K K CCS
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGNTK-KGCCS 215
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/216 (87%), Positives = 200/216 (92%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VDHEYDYLFKIVL GDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAHRVDHEYDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDL+HLRAV+ +D Q LAE+EGLSFLETSALEA N+EKAFQTIL +IYHI+SKK
Sbjct: 121 MMAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEAA T LP QGTTINV + SGN K + CCS
Sbjct: 181 ALAAQEAAVGTTLPGQGTTINVGDASGNTK-RGCCS 215
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/216 (87%), Positives = 200/216 (92%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VDHEYDYLFKI+LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAHRVDHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLRAV+ +D LAEK+GLSFLETSALEA N+EKAFQTIL +IYHI+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALAEKDGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEA + +P QGTTINVA+ SGN K K CCS
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGNTK-KGCCS 215
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/216 (88%), Positives = 202/216 (93%), Gaps = 4/216 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA +VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDL HLRAV+ ED Q LAEKEGLSFLETSALEA+N+EKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEA+S+ LP QGTTINVA+ S N + ++CCS
Sbjct: 181 ALAAQEASSN--LPGQGTTINVADASANQR-RSCCS 213
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/216 (87%), Positives = 198/216 (91%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M ++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MTHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDL+HLRAV +D Q LAE+EGLSFLETSALEA N+EKAFQTIL +IYHI+SKK
Sbjct: 121 MMAGNKSDLSHLRAVYEDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEA T LP QGTTINV + SGN K + CCS
Sbjct: 181 ALAAQEAGVGTTLPGQGTTINVGDASGNTK-RGCCS 215
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/215 (86%), Positives = 198/215 (92%), Gaps = 1/215 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VD+EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+QTF+N+ RWLRELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+V ED Q LAEKEGLSFLETSALEALNVEKAFQTIL DI+ IISKK
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
ALAAQEAA S QGTTINVA+ SGN K K CCS
Sbjct: 181 ALAAQEAAGSGPPTQGTTINVADSSGNTK-KGCCS 214
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 199/216 (92%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VD+EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+QTF+N+ RWLRELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+V ED Q LAEKEGLSFLETSALEALNVEKAFQT+L DI+ IISKK
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
ALAAQEAA S QGTTINVA+ S N+KG CCS+
Sbjct: 181 ALAAQEAAGSGPPGQGTTINVADSSANMKG-GCCSS 215
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 199/216 (92%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA+++D+EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAHRMDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+QTF+N+ RWLRELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+VA ED Q LAEKEGLSFLETSALEALNVEKAFQT+L DI+ IISKK
Sbjct: 121 MMVGNKSDLNHLRSVAEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
ALAAQEAA S QGTTIN+A+ S N K + CCS+
Sbjct: 181 ALAAQEAAGSGPPGQGTTINIADPSANTK-RGCCSS 215
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/216 (84%), Positives = 197/216 (91%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VD+EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+QTF+N+ RWLRELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+V ED Q LAEKEGLSFLETSALEALNVEKAFQTIL DI+ IISKK
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
ALAAQEAA S QGTTINV + + N K + CCS+
Sbjct: 181 ALAAQEAAGSGPPTQGTTINVTDSAVNTK-RGCCSS 215
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 197/216 (91%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VD+EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EG+T
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+QTF+N+ RWLRELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+V ED Q LAEKEGLSFLETSALEALNVEKAFQTIL DI+ IISKK
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
ALAAQEAA S QGTTINV + + N K + CCS+
Sbjct: 181 ALAAQEAAGSGPPTQGTTINVTDSAVNTK-RGCCSS 215
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 198/216 (91%), Gaps = 4/216 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA ++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLR+VA ED + LAEKEGLSFLETSALEA N+EKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEAA + LP QGT IN+++ S + K CCS
Sbjct: 181 ALAAQEAAGN--LPGQGTAINISDSSATNR-KGCCS 213
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/217 (82%), Positives = 198/217 (91%), Gaps = 2/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VD+EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ++GKT
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLV+DITKRQTFDNV RWLRELRDHAD+NIV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+V ED+Q +EKE LSFLETSALEA+NVEKAF T+L +I+ I+SKK
Sbjct: 121 MMVGNKSDLNHLRSVPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQIVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
ALAAQE+AS+ G QGTTINVA S N KG +CCS+
Sbjct: 181 ALAAQESASANGRSMQGTTINVAEPSTNTKG-SCCSS 216
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/216 (82%), Positives = 197/216 (91%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA ++D+EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MANRIDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLR+++ ED + LAEKEGLSFLETSALEA N+EKAFQ+IL +IYHI+SKK
Sbjct: 121 MMAGNKSDLNHLRSISDEDGRSLAEKEGLSFLETSALEASNIEKAFQSILSEIYHIVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEAA S +P QGT IN+++ + + CCS
Sbjct: 181 ALAAQEAAGSMAVPGQGTAINISDTYATNR-RGCCS 215
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/216 (87%), Positives = 199/216 (92%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M ++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV+GKT
Sbjct: 1 MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDL HLRAV ED LAEKEGLSFLETSALEA N+EKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLKHLRAVLEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEAA+++ +P QGTTINVA+ SGN K CCS
Sbjct: 181 ALAAQEAAANSTVPGQGTTINVADASGNTS-KGCCS 215
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/216 (87%), Positives = 198/216 (91%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA +VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ++GKT
Sbjct: 1 MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNK DL HLRAV+ ED Q LAE+E LSFLETSALEA N+EKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKCDLKHLRAVSEEDGQGLAEREELSFLETSALEATNIEKAFQTILTEIYHIISKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEAA+ST LP QGTTINV + SGN K CCS
Sbjct: 181 ALAAQEAAASTALPGQGTTINVNDASGNQNKKTCCS 216
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 362 bits (928), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 175/217 (80%), Positives = 194/217 (89%), Gaps = 2/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VD+EYDYLFKIVLIGDSGVGKSNILSRFTRNEF LESKSTIGVEFATRTLQ+EGKT
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLV+DITKRQTFDNV RWLRELRDHAD+NIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+V ED +EKEGLSFLETSALEA+NVEKAF T+L +I+ I+SKK
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
ALAAQE+AS+ G QGTTINVA KG +CCS+
Sbjct: 181 ALAAQESASTNGRSMQGTTINVAEAPAATKG-SCCSS 216
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c; AltName:
Full=Ras-related protein Rab11A; Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 361 bits (927), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 184/218 (84%), Positives = 197/218 (90%), Gaps = 3/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M ++VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT QVEGKT
Sbjct: 1 MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNKSDLNHLR+VA ED Q LAEKEGLSFLETSALEA NVEKAFQTIL +IYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
Query: 181 -ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
A + AA+++ +P QGTTINV + SG K +ACCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAK-RACCSS 217
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 188/216 (87%), Positives = 200/216 (92%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA +VDHEYDYLFK+VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALL YDITKRQTFDNV RWLRELRDH DSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
++AGNKSDL HLRAV+ +D Q L +KEGLSFLETSALEALNV+KAFQTIL DIYHIISKK
Sbjct: 121 ILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
ALAAQEAA+ST LP QGTTINV++ S NVK + CCS
Sbjct: 181 ALAAQEAAASTALPGQGTTINVSDNSANVK-RGCCS 215
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 359 bits (921), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 179/217 (82%), Positives = 201/217 (92%), Gaps = 1/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA+KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+T+TLQVEGKT
Sbjct: 1 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQTF+NV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
+M GNKSDL+HLR+V+ +D Q +AEKEGLSF+ETSAL+A N++KAFQTIL +IYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
ALAAQEAA+S P QGTTINV++ SG+ + CCS+
Sbjct: 181 ALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 359 bits (921), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 185/233 (79%), Positives = 197/233 (84%), Gaps = 21/233 (9%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV---- 56
MA ++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVISLL 60
Query: 57 -------------EGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV 103
GKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF+NV
Sbjct: 61 SLSLNLDNFPPDQFGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENV 120
Query: 104 TRWLRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVE 163
RWLRELRDHADSNIVIMMAGNKSDLNHLR+VA ED + LAEKEGLSFLETSALEA N+E
Sbjct: 121 LRWLRELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIE 180
Query: 164 KAFQTILLDIYHIISKKALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
KAFQTIL +IYHIISKKALAAQEAA + LP QGT IN+++ S + K CCS
Sbjct: 181 KAFQTILSEIYHIISKKALAAQEAAGN--LPGQGTAINISDSSATNR-KGCCS 230
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/217 (83%), Positives = 196/217 (90%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++V+ +YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAHRVEQDYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNK+DLNHLR+VA ED Q LAE EGLSFLETSALEA NVEKAFQT+L +IYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
Query: 181 -ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
A + AA+++ +P QGTTINV + SG K + CCS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVGDTSGAGK-RGCCS 216
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 171/217 (78%), Positives = 193/217 (88%), Gaps = 2/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++V++EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR LQ++GKT
Sbjct: 130 MAHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKT 189
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+Q+FD+V RWLRELR HAD+NIV+
Sbjct: 190 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVV 249
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+V ED + +EKEGLSFLETSALEA+NVEKAF TIL +I+ +SKK
Sbjct: 250 MMVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKK 309
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
ALAAQ +AS+ G QGTTINVA S KG +CCS+
Sbjct: 310 ALAAQASASTNGRSMQGTTINVAESSTVTKG-SCCSS 345
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 180/217 (82%), Positives = 196/217 (90%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT
Sbjct: 1 MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MMAGNK+DLNHLR+VA ED Q LAE EGLSFLETSALEA NVEKAFQT+L +IYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
Query: 181 -ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
A + AA+++ +P QGTTINV + SG K + CCS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGK-RGCCS 216
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 355 bits (911), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 179/217 (82%), Positives = 199/217 (91%), Gaps = 2/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VD+EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLV+DITKRQTFDNV RWLRELRDHAD+NIV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+V ED+Q +EKEGLSFLETSALEA+NVEKAF T+L +I+ I+SKK
Sbjct: 121 MMVGNKSDLNHLRSVPEEDSQAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
ALAAQE+A++ G QGTTINVA S N KG +CCS+
Sbjct: 181 ALAAQESAAANGRSMQGTTINVAEPSTNAKG-SCCSS 216
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 352 bits (902), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 171/217 (78%), Positives = 193/217 (88%), Gaps = 2/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++V++EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR LQ++GKT
Sbjct: 1 MAHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+Q+FD+V RWLRELR HAD+NIV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+V ED + +EKEGLSFLETSALEA+NVEKAF TIL +I+ +SKK
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
ALAAQ +AS+ G QGTTINVA S KG +CCS+
Sbjct: 181 ALAAQASASTNGRSMQGTTINVAESSTVTKG-SCCSS 216
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 165/216 (76%), Positives = 190/216 (87%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TF+NV+RWL+ELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAVA EDAQ AEKEGLSF+ETSALEALNVEKAFQTIL +IY IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
++++ + ++ + +G TI+VA S + K CCS+
Sbjct: 181 SISSDQTTANASIKEGQTIDVAATSESTAKKPCCSS 216
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 172/215 (80%), Positives = 190/215 (88%), Gaps = 2/215 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT+QVEGKT
Sbjct: 1 MARRTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK TF+NV RWL+ELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR V+ EDAQ AEKEGLSFLETSALEA NVE+AFQTIL +I+ IISKK
Sbjct: 121 MLVGNKSDLKHLRGVSTEDAQSFAEKEGLSFLETSALEATNVERAFQTILAEIHRIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
ALA++EAA + G+ +G TI VA+ N K KACCS
Sbjct: 181 ALASEEAAGA-GIKEGKTIVVADPDTNTK-KACCS 213
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 192/217 (88%), Gaps = 2/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++V++EYDYLFKIVLIGDSGVGKSNI SRFTRNEFCLESKSTIGVEFATR LQ++GKT
Sbjct: 1 MAHRVNNEYDYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+Q+FD+V RWLRELR HAD+NIV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+V ED + +EKEGLSFLETSALEA+NVEKAF TIL +I+ +SKK
Sbjct: 121 MMVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
ALAAQ +AS+ G QGTTINVA S KG +CCS+
Sbjct: 181 ALAAQASASTNGRSMQGTTINVAESSTVTKG-SCCSS 216
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 168/216 (77%), Positives = 189/216 (87%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1 MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TFDNV+RWL+ELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAVA EDAQ AEKEGLSF+ETSALEA NVEKAFQTIL +IY IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+L ++E A++ + +G TI V N K KACCS+
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTK-KACCSS 215
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/216 (75%), Positives = 190/216 (87%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TF+NV+RWL+ELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAVA EDAQ AEKEGLSF+ETSALEALNVEKAFQTIL ++Y IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
++++ + ++ + +G TI+VA S + K CCS+
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 167/214 (78%), Positives = 187/214 (87%), Gaps = 1/214 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1 MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TFDNV+RWL+ELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAVA EDAQ AEKEGLSF+ETSALEA NVEKAFQTIL +IY IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
+L ++E A++ + +G TI V N K KACC
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTK-KACC 213
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 164/216 (75%), Positives = 191/216 (88%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + + EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1 MARRPEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TF+NV+RWL+ELRDHAD NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAVA EDAQ AEKEGLSF+ETSALEALNVEKAFQTIL +IY IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
++++ +A+++ + +G TI+VA S + K CCS+
Sbjct: 181 SISSDQASANANVKEGQTIDVAASSESNTKKPCCSS 216
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/216 (75%), Positives = 186/216 (86%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D EYDYLFK+VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TF+NV+RWL+ELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAVA EDAQ AEKEGL+F+ETSALEA NV+KAFQTIL +IY IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
L+++E+A+ + G TI V + K CCS+
Sbjct: 181 TLSSEESAAPVSVKDGKTIVVGGPDPSTKKTTCCSS 216
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 166/216 (76%), Positives = 187/216 (86%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TF+NV+RWL+ELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAVA EDAQ AEKEGLSF+ETSALEA NVEKAFQTIL +IY IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
L++ + A + G+ +G T+ V N K K CCS+
Sbjct: 181 TLSSDDPAPA-GIKEGKTLVVDGSDTNTK-KTCCSS 214
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 339 bits (869), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 164/216 (75%), Positives = 186/216 (86%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TF+NV+RWL+ELRDHAD+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAVA EDAQ AE+EGLSF+ETSALEA NVEKAFQTIL +IY IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+L ++E A + + +G I V N K K CCS+
Sbjct: 181 SLTSEEPAPA-NIKEGKMIVVGGSEANTK-KPCCSS 214
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/216 (74%), Positives = 185/216 (85%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + + EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG T
Sbjct: 1 MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TF+NV+RWL+ELRDHAD+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAVA EDAQ +EKEGLSF+ETSALEA NVEKAFQTIL +IY IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+L++ E AS+ + + TI V N +CC++
Sbjct: 181 SLSSNEPASA-NIKESMTITVGGPQSNASKPSCCTS 215
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 335 bits (858), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 163/216 (75%), Positives = 184/216 (85%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT+QV+GKT
Sbjct: 1 MAPRPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ T++NV RWL+ELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR VA +DAQ +EKEGLSF+ETSALEA NVEKAFQ+IL +IY I+SKK
Sbjct: 121 MLVGNKSDLKHLRGVATDDAQRFSEKEGLSFIETSALEATNVEKAFQSILTEIYRIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINV-ANLSGNVKGKACCS 215
ALA+++ G +G I V N K KACCS
Sbjct: 181 ALASEDPV-LVGPGEGKAIIVGPEQDANTKKKACCS 215
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/212 (75%), Positives = 182/212 (85%), Gaps = 1/212 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+TVKAQI
Sbjct: 9 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGA+GALLVYD+TK TFDNVTRWL+ELRDHAD+NIVIM+ GN
Sbjct: 69 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA-A 184
K+DL HLRAVA EDAQ AEKEGLSF+ETSALEA NVEKAFQT L +IY IISKK+L+ A
Sbjct: 129 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTA 188
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
E A++ + +G TI + K CC++
Sbjct: 189 NEPAAAANIKEGKTIAIGGSETTNTNKPCCTS 220
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 163/217 (75%), Positives = 188/217 (86%), Gaps = 2/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA+K D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATR++QV+GKT
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK T++NV RWL+ELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR V+ +DAQ AEKEGLSF+ETSALE+ NVEKAFQ IL +IY I+SKK
Sbjct: 121 MLVGNKSDLRHLRGVSLDDAQSFAEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTI-NVANLSGNVKGKACCSN 216
ALA++E A+ G QGT I + + S ++K K CC +
Sbjct: 181 ALASEENATE-GPGQGTNIVPLDSNSPDLKKKGCCGD 216
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/215 (74%), Positives = 187/215 (86%), Gaps = 2/215 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA+K D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATR++QV+GKT
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK T++NV RWL+ELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR V +DAQ +EKEGLSF+ETSALE+ NVEKAFQ IL +IY I+SKK
Sbjct: 121 MLVGNKSDLKHLRGVPTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTI-NVANLSGNVKGKACC 214
ALA++E +++ G QGT I + + S ++K K CC
Sbjct: 181 ALASEE-STTEGPGQGTNIVPLDSNSPDLKKKGCC 214
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/214 (76%), Positives = 186/214 (86%), Gaps = 1/214 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA KVD EYD+LFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT+QV+GKT
Sbjct: 1 MARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK TFDNV RWLRELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+H+RAV +DAQ AEKEGLSF+ETSALE+ NVEK+FQ+IL +IY I+ +K
Sbjct: 121 MLVGNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
+ A E A+S G QGT INV++ K ++CC
Sbjct: 181 S-LAAEEAASAGPSQGTPINVSDAETIAKKRSCC 213
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 162/217 (74%), Positives = 185/217 (85%), Gaps = 5/217 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA+K D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATR++QV+GKT
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK T++NV RWL+ELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR V+ +DAQ +EKEGLSF+ETSALE+ NVEKAFQ IL +IY I+SKK
Sbjct: 121 MLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKG--KACCS 215
ALA++E ++ G QGT N+ L N K CCS
Sbjct: 181 ALASEE-NTTEGPGQGT--NIVPLDSNAPDLKKGCCS 214
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 162/217 (74%), Positives = 186/217 (85%), Gaps = 6/217 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA+K D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATR++QV+GKT
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK T++NV RWL+ELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR V+ +DAQ +EKEGLSF+ETSALE+ NVEKAFQ IL +IY I+SKK
Sbjct: 121 MLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGN---VKGKACC 214
ALA++E ++ G QGT N+ L N +K K CC
Sbjct: 181 ALASEE-NTTEGPGQGT--NIVPLDSNAPDLKKKGCC 214
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 162/217 (74%), Positives = 186/217 (85%), Gaps = 6/217 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA+K D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATR++QV+GKT
Sbjct: 1 MAHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK T++NV RWL+ELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR V+ +DAQ +EKEGLSF+ETSALE+ NVEKAFQ IL +IY I+SKK
Sbjct: 121 MLVGNKSDLKHLRGVSTDDAQSFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGN---VKGKACC 214
ALA++E ++ G QGT N+ L N +K K CC
Sbjct: 181 ALASEE-NTTEGPGQGT--NIVPLDSNAPDLKKKGCC 214
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 162/214 (75%), Positives = 185/214 (86%), Gaps = 1/214 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA KVD EYD+LFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT+QV+GKT
Sbjct: 1 MARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK TFDNV RWLRELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+H+RAV +DAQ AEKEGLSF+ETSALE+ NVEK+FQ+IL +IY I+ +K
Sbjct: 121 MLVGNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
+ A E A+S G QGT IN ++ K ++CC
Sbjct: 181 S-LAAEEAASAGPSQGTPINASDAETIAKKRSCC 213
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 332 bits (851), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 186/217 (85%), Gaps = 2/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + + EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1 MARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TF+NV+RWL+ELRDHAD+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAVA EDAQ AEKEGLSF+ETSALEA NVE AFQTIL +IY IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIISKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS-GNVKGKACCSN 216
+L++ + A++ + +G TI V N +CC++
Sbjct: 181 SLSSNDPAANI-IKEGKTITVGGAPEPNTNKPSCCTS 216
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/216 (73%), Positives = 183/216 (84%), Gaps = 4/216 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M +K D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATR++QV+GKT
Sbjct: 1 MNHKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ TF+NV RWL+ELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR+V +D+Q EKEGLSF+ETSALE+ NVE+AFQ IL +IYHI+SKK
Sbjct: 121 MLVGNKSDLRHLRSVQTDDSQAFCEKEGLSFIETSALESTNVEQAFQRILTEIYHIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGK-ACCS 215
ALA+++ +GT I V+ K K ACCS
Sbjct: 181 ALASEDKPQP---DKGTRIVVSETQPEEKKKSACCS 213
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 156/217 (71%), Positives = 183/217 (84%), Gaps = 2/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M K D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT
Sbjct: 1 MVPKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ TF+NV RWL+ELRDHAD+NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR+V EDA+ E+EGLSF+ETSALEA NVE+AFQ IL +IYHI+SKK
Sbjct: 121 MLVGNKSDLRHLRSVQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKA-CCSN 216
ALA+++ ++ GT I V + K K+ CCS+
Sbjct: 181 ALASEDGPAAAPT-SGTAIKVTEAAPEAKKKSTCCSS 216
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 164/216 (75%), Positives = 189/216 (87%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TF+NV+RWL+ELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAVA EDAQ AEKEGL+F+ETSALEA NVEKAFQTIL +IY I+SKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+L+++E+A ++ + G TI V + K K CCS+
Sbjct: 181 SLSSEESAPAS-IKDGKTIVVGGPEPDTK-KTCCSS 214
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 161/217 (74%), Positives = 190/217 (87%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M +VDHEY YLFK+VLIGDSGVGKSNILSRFTRN F L+SKSTIGVEFAT++LQ+EGKT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQ+FDNV RWLRELRDHADS+IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDL HLRAV+ ++ + LAEKEGL FLETSA+EA+NVE+AFQTI+ ++Y I+++K
Sbjct: 121 MMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRK 180
Query: 181 -ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
A + AA+S LP QG TI++ + +GN K +ACCS
Sbjct: 181 ALAAKEAAAASAPLPSQGKTISIDSAAGNTK-RACCS 216
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/217 (73%), Positives = 189/217 (87%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M +VDHEY YLFK+VLIGD+GVGKSNILSRFTRN F L+SKSTIGVEFAT++LQ+EGKT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQ+FDNV RWLRELRDHADS+IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK- 179
MM GNKSDL HLRAV+ ++ + LAEKEGL FLETSA+EA+NVE+AFQTI+ ++Y I+++
Sbjct: 121 MMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRK 180
Query: 180 KALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
A + AA+S LP QG TI++ + +GN K +ACCS
Sbjct: 181 ALAAKEAAAASRPLPSQGKTISIDSAAGNTK-RACCS 216
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/215 (71%), Positives = 176/215 (81%), Gaps = 1/215 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAYKVD +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GK
Sbjct: 1 MAYKVDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKM 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT+ TF+NV RWL+ELRDH + NIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV+ EDAQ AE+EGL F+ETSALE+ NVE AF+ +L IY I+SKK
Sbjct: 121 MLVGNKSDLRHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
AL E ++ PQG TINV + K CCS
Sbjct: 181 ALDVSE-DNAAAPPQGQTINVKDDVTATKKVGCCS 214
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/217 (72%), Positives = 189/217 (87%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M +VDHEY YLFK+VLIGDSGVGKSNILSRFTRN F L+SKSTIGVEFAT++LQ++GKT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQ+FDNV RWLRELRDHADS+IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDL HLRA++ ++ + LAEKEGL FLETSA+EA+NVE+AFQTI+ ++Y I+++K
Sbjct: 121 MMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVNRK 180
Query: 181 -ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
A + AA++ LP QG I++ + +GN K +ACCS
Sbjct: 181 ALAAKEAAAATASLPSQGKIISIDSTAGNTK-RACCS 216
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 158/217 (72%), Positives = 189/217 (87%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M +VDHEY YLFK+VLIGDSGVGKSNILSRFTRN F L+SKSTIGVEFAT++LQ++GKT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAV ALLVYDITKRQ+FDNV RWLRELRDHADS+IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDL HLRA++ ++ + LAEKEGL FLETSA+EA+NVE+AFQTI+ ++Y I+++K
Sbjct: 121 MMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRK 180
Query: 181 -ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
A + AA++ LP QG TI++ + +GN K KACCS
Sbjct: 181 ALAAKEAAATAAPLPSQGKTISIDSNAGNTK-KACCS 216
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/214 (71%), Positives = 180/214 (84%), Gaps = 2/214 (0%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+ + EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTL VEGK +KA
Sbjct: 6 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKA 65
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGA+GA+LVYD++K TFDN++RWL+ELRDHAD+NI IM+
Sbjct: 66 QIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRIMLV 125
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNK+DL HLRAVA +DA AE EGLS++ETSALEA NVE+AFQ IL DIY ISKK +A
Sbjct: 126 GNKTDLKHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVA 185
Query: 184 AQE--AASSTGLPQGTTINVANLSGNVKGKACCS 215
+ E A ++ G+ +G TINVA N + K CCS
Sbjct: 186 SDEGGAGAAGGVKEGKTINVAAGDANSEKKQCCS 219
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 182/216 (84%), Gaps = 5/216 (2%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+ + EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTL VEGK +KA
Sbjct: 5 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKA 64
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGA+GA+LVYD++K TF+N++RWL+ELRDHADSNI IM+
Sbjct: 65 QIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIRIMLV 124
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNK+DL HLRAVA +DAQ AE EGLS++ETSALEA NVE+AFQ IL DIY ISKK +A
Sbjct: 125 GNKTDLRHLRAVATDDAQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVA 184
Query: 184 AQEA--ASSTGLPQGTTINVANLSGN--VKGKACCS 215
+ E+ ++ G+ +G TINVA G+ + K CCS
Sbjct: 185 SDESGQGAAGGVKEGKTINVAT-GGDAAAEKKQCCS 219
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 157/217 (72%), Positives = 188/217 (86%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M +VDHEY YLFK+VLIGDSGVGKSNILSRFTRN F L+SKSTIGVEFAT++LQ++GKT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAV ALLVYDITKRQ+FDNV RWLRELRDHADS+IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDL HLRA++ ++ + LAEKEGL FLET A+EA+NVE+AFQTI+ ++Y I+++K
Sbjct: 121 MMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETLAMEAINVEEAFQTIITEVYGIVNRK 180
Query: 181 -ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
A + AA++ LP QG TI++ + +GN K KACCS
Sbjct: 181 ALAAKEAAATAAPLPSQGKTISIDSNAGNTK-KACCS 216
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 177/216 (81%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M++K D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT
Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK TF+NV RWL+ELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR V E AQ E+EGLSF+ETSALE+ NVEKAFQ IL +IYHI+SKK
Sbjct: 121 MLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKK 180
Query: 181 ALAAQEAASSTGLPQGT-TINVANLSGNVKGKACCS 215
L +++ G + I+ A+ G K CCS
Sbjct: 181 VLDSEDNRPKIGEGRDVIVIDNAHDDGGKKKGGCCS 216
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 315 bits (807), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 153/209 (73%), Positives = 179/209 (85%), Gaps = 2/209 (0%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTL VEGK +KAQIWDT
Sbjct: 16 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDT 75
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGA+GA+LVYD+TK TF+N++RWL+ELRDHAD+NI IM+ GNK+D
Sbjct: 76 AGQERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKTD 135
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE-A 187
L HLRAV +DA AE EGLS++ETSALEA+NVE+AFQ IL DIY ISKKA+A++E
Sbjct: 136 LKHLRAVTTDDAGSYAEAEGLSYIETSALEAMNVEEAFQLILGDIYRTISKKAVASEEDR 195
Query: 188 ASSTGLPQGTTINV-ANLSGNVKGKACCS 215
A++ G+ +G TINV A S + K CCS
Sbjct: 196 AAAAGVKEGKTINVAATASDGGEKKQCCS 224
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/217 (72%), Positives = 187/217 (86%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M +VDHEY YLFK+VLIGDSGVGKSNILSRFTRN F L+SKSTIGVEFAT++LQ+EGKT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQ+F+NV RWLRELRDHADS+IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSSIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS-K 179
MM GNKSDL HLR+V+ + + LAEKEGL FLETSA+EA+NVE+AFQTI+ ++Y I++ K
Sbjct: 121 MMVGNKSDLTHLRSVSEDQGKALAEKEGLFFLETSAMEAVNVEEAFQTIIAEVYGIVNKK 180
Query: 180 KALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
A + AA++ LP QG I++ + +GN K +ACCS
Sbjct: 181 ALAAKEAAAAAAPLPSQGKAISIDSTAGNSK-RACCS 216
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 193/217 (88%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M +VDHEY YLFK+VLIGDSGVGKSNILSRFTRN F L+SKSTIGVEFAT++LQ++GKT
Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQ+F+NV RWLRELRDHADS+IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSSIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDL HLRA++ ++ + LAEKEGL FLETSA+EA+NVE+AFQTI+ ++Y I+++K
Sbjct: 121 MMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRK 180
Query: 181 ALAAQEAASSTGL--PQGTTINVANLSGNVKGKACCS 215
ALAA+EAA++T QG TI++ + +GN K +ACCS
Sbjct: 181 ALAAKEAAATTATLPSQGKTISIDSTAGNTK-RACCS 216
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/217 (72%), Positives = 182/217 (83%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + + EYDYLFK+VLIGDSGVGKSN+ SRFTRNEFCLESKSTIGVEFATRTL+VEG+
Sbjct: 1 MARRGEEEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRM 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK +F+NVTRWL+ELRDHAD+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLR VA EDAQ AEKEGLSF+ETSALEA NV+KAFQTIL IY IISKK
Sbjct: 121 MLIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRIISKK 180
Query: 181 ALAAQEA-ASSTGLPQGTTINV-ANLSGNVKGKACCS 215
+L++ S+ + QG TI + L N K+CC+
Sbjct: 181 SLSSSSTDPSAPNIKQGNTITIEGGLQPNTS-KSCCT 216
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 149/216 (68%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT++L ++ K +
Sbjct: 3 GYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+N RWL+ELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ED + AE+E L F+ETSALEA NVE AF +L IYHI+SKKA
Sbjct: 123 LIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVSKKA 182
Query: 182 LAAQEAASSTGLPQ-GTTINVANLSGNVKGKACCSN 216
+ A E+ SS+ +P G TINV S K CCSN
Sbjct: 183 VEAGESGSSSAVPSIGQTINVKEDSSVFKRFGCCSN 218
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/214 (70%), Positives = 176/214 (82%), Gaps = 2/214 (0%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+ + EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTL VEGK +KA
Sbjct: 5 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKA 64
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGA+GA+LVYD++K TF+N++RWL+ELRDHADSN IM+
Sbjct: 65 QIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTRIMLV 124
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNK+DL HLRAVA +DA+ AE EGLS++ETSALEA NVE+AFQ IL DIY +SKK +A
Sbjct: 125 GNKTDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAVSKKPVA 184
Query: 184 AQE-AASSTGLPQGTTINVA-NLSGNVKGKACCS 215
+ E A G+ +G TI+VA K CCS
Sbjct: 185 SDEVGAGQGGVKEGKTIDVATGADAAAHKKQCCS 218
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/215 (69%), Positives = 173/215 (80%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFAT+TL V+ K V
Sbjct: 3 GYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+N RWL+ELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ED + AE+E L F+ETSALEA NVE AF +L IY I+SK+A
Sbjct: 123 LIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
+ A ++ SS+GLP +G TINV S +K CCS
Sbjct: 183 VEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCS 217
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/213 (70%), Positives = 177/213 (83%), Gaps = 3/213 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTL VEGK +KAQI
Sbjct: 16 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQI 75
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGA+GA+LVYD++K TF+N++RWL+ELRDHAD+NI IM+ GN
Sbjct: 76 WDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADANIRIMLVGN 135
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL HLRAVA +D Q AE EGLS++ETSALEA NVE+AFQ IL DIY ISKKA+A
Sbjct: 136 KTDLKHLRAVATDDGQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKAVALD 195
Query: 186 E---AASSTGLPQGTTINVANLSGNVKGKACCS 215
+ + G+ +G TINVA + + K CCS
Sbjct: 196 DGGAGGAGGGVKEGKTINVAASDTSGEKKQCCS 228
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/216 (68%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V+GK +
Sbjct: 66 GYRAEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVI 125
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 126 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 185
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AE+E L F+ETSALEA NVE AF +L IY+I+SKKA
Sbjct: 186 LVGNKSDLRHLLAVSTEDGKSFAEREALFFMETSALEATNVENAFAEVLTQIYNIVSKKA 245
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
L E A+ + +P QG I+V VK CCS+
Sbjct: 246 LETSEQANGSAVPSQGEKIDVGKDVSAVKRGGCCSS 281
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 176/218 (80%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RW+REL+DH D+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV+ EDA+ AEKE F+ETSALE++NVE AF +L IYH++SKK
Sbjct: 121 MLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TINV VK ACCS+
Sbjct: 181 ALDIGDDPAAP--PKGQTINVGGKDDVSAVKKSACCSS 216
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 175/214 (81%), Gaps = 2/214 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
GNK+DL HLRAV+ EDA+ AE+E F+ETSALE+LNVE AF +L IYH++S+KA
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
L + ++ LP+G TINV + VK CCS
Sbjct: 183 LDIGDDPAA--LPKGETINVKDDVSAVKKVGCCS 214
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 308 bits (790), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/216 (68%), Positives = 173/216 (80%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
YK D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT++L ++ K +
Sbjct: 3 GYKGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+N RWL+ELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ED + AEKE L F+ETSALEA NVE AF +L IY I+SK+
Sbjct: 123 LIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRT 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ A + ASS+ +P +G TINV + S +K CCSN
Sbjct: 183 VEAGKNASSSAVPSKGQTINVKDDSSVLKKIGCCSN 218
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 174/216 (80%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L V+GK V
Sbjct: 3 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AEKE L F+ETSALEA NVE +F +L IYHI+SKKA
Sbjct: 123 LVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSKKA 182
Query: 182 LAAQEA-ASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A + A+++ P+G I+V+ VK CCS+
Sbjct: 183 MEAGDGTAAASVPPKGEKIDVSKDVSAVKKAGCCSS 218
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 176/216 (81%), Gaps = 4/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALE+LNVE AF +L IYH++SKKA
Sbjct: 123 LVGNKADLRHLRAVSTEDARTFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L + ++ LP+G TINV + VK CCS
Sbjct: 183 LEIGDDPAA--LPKGQTINVGSRDDVSAVKKSGCCS 216
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/216 (68%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
YK D EYDYLFK+V IGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT++L ++ K +
Sbjct: 3 GYKGDDEYDYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDIDAKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+N RWL+ELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ED + AEKE L F+ETSALEA NVE AF +L IY I+SK+A
Sbjct: 123 LIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ A ASS+ +P +G TINV + S +K CCSN
Sbjct: 183 VEAGNNASSSAVPSKGQTINVKDDSSVLKKIGCCSN 218
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/215 (68%), Positives = 175/215 (81%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL V+GK +
Sbjct: 3 GYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+EL++H DSNIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ED + AE+E L F+ETSALEA+NVEKAF +L IYHI+SKKA
Sbjct: 123 LVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
+ E S++ +P QG IN+ + SG + K C S
Sbjct: 183 VEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 171/211 (81%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V +GN CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTGNKPKMQCCQN 215
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/217 (68%), Positives = 175/217 (80%), Gaps = 4/217 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ EDAQ AEKE F+ETSALE+LNVE AF +L IY ++ +KA
Sbjct: 123 LVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
L E ++ LP+G TINV N +K CCS+
Sbjct: 183 LEIGEDPAA--LPKGQTINVGNKDDVSAMKKVGCCSS 217
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 175/218 (80%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RW+RELRDH D+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV EDA+ AE+E F+ETSALEA+NVE AF +L IYH++SKK
Sbjct: 121 MLVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAFTEVLTQIYHVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TI+V VK ACCS+
Sbjct: 181 ALDIGDDPAAP--PRGQTISVGGKDDVSAVKKSACCSS 216
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/210 (70%), Positives = 174/210 (82%), Gaps = 1/210 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFK+VLIGDSGVGKSN+LSRFT+N F L+SKSTIGVEFATRTLQVE K +KAQIWD
Sbjct: 14 EYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQIWD 73
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYD+TK TF+NV RWL+ELRDHADSNIV+M+ GNK+
Sbjct: 74 TAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNKT 133
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLR+VA EDA AE EGL F+ETSAL+A NVEKAF T+L +IY IISKK L+++E+
Sbjct: 134 DLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFHTVLAEIYRIISKKPLSSEES 193
Query: 188 ASSTG-LPQGTTINVANLSGNVKGKACCSN 216
+G L +G +I V+ + CCS+
Sbjct: 194 GLGSGNLREGQSIQVSATNSGALTSRCCSS 223
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/212 (69%), Positives = 173/212 (81%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKTVKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSFLETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSER 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA-CCSN 216
+ + + P +N+ K K CC N
Sbjct: 185 QESDMS--PSNNVVNIQVPPTENKPKMQCCQN 214
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/212 (69%), Positives = 173/212 (81%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKTVKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSFLETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSER 184
Query: 186 EAASSTGLPQGTTINV-ANLSGNVKGKACCSN 216
+ + + P +N+ + N CC N
Sbjct: 185 QESDMS--PSNNVVNIQVQPTENKPKMQCCQN 214
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/209 (71%), Positives = 172/209 (82%), Gaps = 5/209 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NVTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV E+A+ + + GLSF+ETSAL+A NVE AFQTIL DIY I+S K+L +++A
Sbjct: 127 LKHLRAVPTEEAKTFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL--EQSA 184
Query: 189 SSTGLPQGTTINVA---NLSGNVKGKACC 214
P G T+ V+ + S N +G CC
Sbjct: 185 DPIKPPTGDTLTVSPSVDNSANAQGGKCC 213
>gi|357123588|ref|XP_003563492.1| PREDICTED: ras-related protein RABA2b-like [Brachypodium
distachyon]
Length = 183
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/215 (73%), Positives = 167/215 (77%), Gaps = 33/215 (15%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA++VD+EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1 MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQER WLRELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQER--------------------------------WLRELRDHADSNIVI 88
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
MM GNKSDLNHLR+V ED Q LAEKEGLSFLETSALEALNVEKAFQTIL DI+ IISKK
Sbjct: 89 MMVGNKSDLNHLRSVQEEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKK 148
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
ALAAQEAA S QGTTINVA+ SGN K K CCS
Sbjct: 149 ALAAQEAAGSGPPIQGTTINVADSSGNTK-KGCCS 182
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 171/211 (81%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 109
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 110 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 169
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 170 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 229
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
++ I+V + N CC N
Sbjct: 230 RENDTSPSNNVVPIHVPPTTENKPKVQCCQN 260
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/177 (81%), Positives = 161/177 (90%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + + EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTL+VEG+
Sbjct: 1 MARRGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRM 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK +F+NVTRWL+ELRDHAD+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHII 177
M+ GNK+DL HLR VA EDAQ AEKEGLSF+ETSALEA NV+KAFQTIL IY II
Sbjct: 121 MLIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRII 177
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/217 (68%), Positives = 173/217 (79%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GK
Sbjct: 1 MAYRSDEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKL 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT+ T++NV RWL+EL+DH DSNIV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV+ ED Q +E+EGL F+ETSALE+ NVE AF+ IL IY ++SKK
Sbjct: 121 MLVGNKSDLRHLRAVSTEDGQAFSEREGLYFMETSALESTNVENAFKQILTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSG--NVKGKACCS 215
AL E S+ +G TINV K CCS
Sbjct: 181 ALDVGEDPSAAP-AKGQTINVGGKDDVTATKKVGCCS 216
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 146/218 (66%), Positives = 174/218 (79%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RW+REL+DH D+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV EDA+ AE+E F+ETSALEA+NVE AF +L IY ++SKK
Sbjct: 121 MLVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TINV VK ACCS+
Sbjct: 181 ALDIGDDPAAP--PKGQTINVGGKDDVSAVKKSACCSS 216
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 305 bits (782), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/218 (66%), Positives = 174/218 (79%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ VE K
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RW+RELRDH D+NIV+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVM 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV EDA+ AE++ F+ETSALEA+NVE AF +L IY ++SKK
Sbjct: 121 MLVGNKADLRHLRAVPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TINV VK ACCS+
Sbjct: 181 ALDIGDDPAAP--PRGHTINVGGKDDVSAVKKSACCSS 216
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 109
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 110 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 169
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 170 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 229
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 230 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 260
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 158/218 (72%), Positives = 174/218 (79%), Gaps = 5/218 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1 MARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TK TF+ V WL+ELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKPTTFEQV--WLKELRDHADSNIVI 118
Query: 121 MMAGNKSDLNHLRAVAAEDAQ-ILAEKEGLSFLETSALEALNVEKAFQTIL-LDIYHIIS 178
M+ GNK+DL H RAV EDAQ + K+ LSF+ETSAL+A NVEKAFQTIL L IIS
Sbjct: 119 MLIGNKTDLKHSRAVRTEDAQGFMLRKKALSFIETSALKATNVEKAFQTILCLRFTGIIS 178
Query: 179 KKALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
KK+L++ E A S I V N K K CCSN
Sbjct: 179 KKSLSSDEPAPSVIKEAVKHIVVGGSEANTK-KPCCSN 215
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 176/216 (81%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFAT++L ++ K +
Sbjct: 3 GYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ T++NVTRWL+ELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ++A+ LAE+EGL F+ETSALEA NVE AF L IY I+SKKA
Sbjct: 123 LIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKA 182
Query: 182 L-AAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E A+S+ P+G TIN+ + + K CCS+
Sbjct: 183 VEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/195 (74%), Positives = 171/195 (87%), Gaps = 1/195 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFKIVLIGDSGVGKSN+LSRFT+N F L+SKSTIGVEFATRT++VEGKT+KAQIWD
Sbjct: 14 EYDYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQIWD 73
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYD+TK TFDNV RWL+ELRDHADSNIVIM+ GNK
Sbjct: 74 TAGQERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLIGNKM 133
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLR+VA EDA AE+EGLSF+ETSAL+A NV++AFQT+L +IY IISKKAL+ ++
Sbjct: 134 DLKHLRSVAQEDAASFAEREGLSFIETSALDATNVDRAFQTVLGEIYRIISKKALSTDDS 193
Query: 188 ASSTGLPQGTTINVA 202
+ + +G +I V+
Sbjct: 194 GAGA-VKEGQSIQVS 207
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 174/217 (80%), Gaps = 4/217 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
GNK+DL HLRAV+ EDA+ AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
L + ++ LP+G TINV + VK CCSN
Sbjct: 183 LDIGDDPAA--LPKGQTINVGSKDDVSAVKKVGCCSN 217
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 176/219 (80%), Gaps = 4/219 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ---VE 57
M++K D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q V+
Sbjct: 1 MSHKQDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVD 60
Query: 58 GKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSN 117
GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK TF+NV RWL+ELRDHAD+N
Sbjct: 61 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADAN 120
Query: 118 IVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHII 177
IVIM+ GNKSDL HLR V E AQ E+EGLSF+ETSAL++ NVEKAFQ IL +IYHI+
Sbjct: 121 IVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILTEIYHIV 180
Query: 178 SKKALAAQEAASSTGLPQG-TTINVANLSGNVKGKACCS 215
SKK L +++ G + I+ + G K CCS
Sbjct: 181 SKKVLDSEDNRPKIGEGRDLIVIDKQHDDGAKKKGGCCS 219
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKMQCCQN 215
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/215 (67%), Positives = 174/215 (80%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL V+GK +
Sbjct: 3 GYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQ RYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+EL++H DSNIV+M
Sbjct: 63 KAQIWDTAGQGRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ED + AE+E L F+ETSALEA+NVEKAF +L IYHI+SKKA
Sbjct: 123 LVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
+ E S++ +P QG IN+ + SG + K C S
Sbjct: 183 VEGGENGSASAVPAQGEKINIKDESGLNRIKCCSS 217
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 171/216 (79%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + YDYLFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATRT+QV+GKT
Sbjct: 1 MAGEAAVSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K+ TFDNV RWL+ELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV + AQ AE+ LSF+ETSAL+A NVE AFQ+IL DIY I+S K
Sbjct: 121 MLVGNKSDLKHLRAVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
AL + T P+ TI V+ G C SN
Sbjct: 181 ALDQNQGPGLTPGPR-ETITVSKSEEKKNGGCCASN 215
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 65
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 125
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 126 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 185
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 186 RENDMSPSNNVVPIHVPPTTENKPKMQCCQN 216
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/215 (68%), Positives = 173/215 (80%), Gaps = 3/215 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV EDA+ AE+E F+ETSALE+LNVE AF +L IY ++S+KA
Sbjct: 123 LVGNKADLRHLRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVA-NLSGNVKGKACCS 215
L + ++ LP+G TINV + VK CCS
Sbjct: 183 LDVGDDPAA--LPKGQTINVGKDDVSAVKKVGCCS 215
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHMSDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 169/211 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTTKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQTILTEIYRIVSQKQMSDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKMQCCQN 215
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 171/216 (79%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
YK D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT++L ++GK +
Sbjct: 3 GYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+ RWL+ELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL V+ ED + AEKE L F+ETSALEA NVE AF +L IY I+SK+A
Sbjct: 123 LIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ A + AS++ +P QG TINV S + CCSN
Sbjct: 183 VEAGDRASTSVVPSQGQTINVNEDSSVLNRYRCCSN 218
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 174/217 (80%), Gaps = 4/217 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+N+ RWL+ELRDH DSNIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
GNK+DL HLRAV+ EDA+ AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
L + ++ LP+G TINV + VK CCSN
Sbjct: 183 LDIGDDPAA--LPKGQTINVGSKDDVSAVKKVGCCSN 217
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 175/218 (80%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+ELRDH D+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALEA+NVE AF +L IY ++SKK
Sbjct: 121 MLVGNKADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TINV VK CCS+
Sbjct: 181 ALDIGDDPAAP--PRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 175/217 (80%), Gaps = 4/217 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+N VIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAVA EDA+ AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 123 LVGNKADLRHLRAVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
L + ST LP+G TINV + VK CCS+
Sbjct: 183 LDVGD--DSTYLPKGQTINVGSRDDVSAVKKAGCCSS 217
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 173/216 (80%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFAT++L ++GK +
Sbjct: 3 GYRGDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAIT AYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ E+A+ LAE+E L F+ETSALEA NVE AF L IY I+SKKA
Sbjct: 123 LLGNKSDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSKKA 182
Query: 182 L-AAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E A+ST P+G TIN+ + K CCS+
Sbjct: 183 VEAGDEGATSTAPPKGQTINIKDEGSAWKKFGCCSS 218
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 175/218 (80%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+ELRDH D+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALEA+NVE AF +L IY ++SKK
Sbjct: 121 MLVGNKADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TINV VK CCS+
Sbjct: 181 ALDIGDDPAAP--PRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/209 (71%), Positives = 171/209 (81%), Gaps = 5/209 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NVTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ + + GLSF+ETSAL+A NVE AFQTIL DIY I+S KAL ++AA
Sbjct: 127 LKHLRAVPTDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSSKAL--EQAA 184
Query: 189 SSTGLPQGTTINVA---NLSGNVKGKACC 214
S QG +I V + N +G CC
Sbjct: 185 DSIKPTQGDSIPVRPTLDAPANKEGGKCC 213
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 169/211 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL+ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V+GK +
Sbjct: 3 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AE+E L F+ETSALEA NV+ AF +L IY I+SKKA
Sbjct: 123 LIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ A + +++ +P +G I+V +K CCSN
Sbjct: 183 MEAGDDGAASAVPSKGEKIDVGKDVSAMKRVGCCSN 218
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V+GK +
Sbjct: 3 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AEKE L F+ETSALEA NVE AF +L IY+I+SKKA
Sbjct: 123 LVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ + +++ +P +G I+V +K CCS+
Sbjct: 183 METSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 146/215 (67%), Positives = 173/215 (80%), Gaps = 3/215 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH +SNIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV EDA AE+E F+ETSALE+LNVE AF +L IYH++S+KA
Sbjct: 123 LVGNKADLRHLRAVTTEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVA-NLSGNVKGKACCS 215
L + ++ LP+G TINV + VK CCS
Sbjct: 183 LDVGDDPAA--LPKGQTINVGKDDVSAVKKVGCCS 215
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V+GK +
Sbjct: 3 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AEKE L F+ETSALEA NVE AF +L IY+++SKKA
Sbjct: 123 LVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNVVSKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ + +++ +P +G I+V +K CCS+
Sbjct: 183 METSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 175/218 (80%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K
Sbjct: 108 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV 167
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+ELRDH D+NIVI
Sbjct: 168 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVI 227
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALE++NVE AF +L IY ++SKK
Sbjct: 228 MLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKK 287
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TINV VK CCS+
Sbjct: 288 ALDIGDDPAAP--PRGQTINVGGKDDVSAVKKSGCCSS 323
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 173/216 (80%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V+GK +
Sbjct: 3 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AE+E L F+ETSALEA NV+ AF +L IY I+SKKA
Sbjct: 123 LIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVSKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ + A+++ +P +G I+V+ +K CCS+
Sbjct: 183 METGDEAAASAVPSKGEKIDVSKDVSAMKRVGCCSS 218
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/197 (72%), Positives = 169/197 (85%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K TF+NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAVA +DA+ AE+ LSF+ETSAL++ NVE+AFQTIL +IY ++S++ + A
Sbjct: 124 KSDLRHLRAVATDDARGYAEQRNLSFIETSALDSTNVEQAFQTILTEIYRLVSRRPMEAG 183
Query: 186 EAASSTGLPQGTTINVA 202
E+ S + QG + V+
Sbjct: 184 ESGDSPSVGQGEKVIVS 200
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 176/211 (83%), Gaps = 3/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A GLSF+ETSAL+A NVE AFQ IL +IY I+S KAL +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASDNGLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 186 EAASSTGLPQGTTINVANLS--GNVKGKACC 214
+ A + + GT I+++ + G+ KG CC
Sbjct: 183 DGAQAN-IGAGTNISLSKPADDGSAKGGKCC 212
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V+GK +
Sbjct: 3 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AEKE L F+ETSALEA NVE +F +L IY++ISKKA
Sbjct: 123 LVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVISKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ + +++ +P +G I+V +K CCS+
Sbjct: 183 METSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 170/216 (78%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
YK D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT++L ++GK +
Sbjct: 3 GYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+ RWL+ELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL V+ ED + AEKE L F+ETSALEA NVE AF +L IY I+SK+A
Sbjct: 123 LIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ A + S++ +P QG TINV S + CCSN
Sbjct: 183 VEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 171/209 (81%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K+QT++NVTRWL+ELRDHAD+NIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV+ +DA+ A + GLSF+ETSAL+A NVE AFQ L +IY I+S KAL
Sbjct: 123 KSDLRHLRAVSTDDAKQFASENGLSFIETSALDASNVELAFQQELAEIYRIVSSKALDQG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
E + G + +N+ + K CC
Sbjct: 183 EPSQGPGQGSAIPLGPSNMPADKKSGQCC 211
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 174/216 (80%), Gaps = 4/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
+Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 SYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 123 LVGNKADLRHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L + ++ LP+G TINV VK CCS
Sbjct: 183 LDIGDDPAA--LPKGQTINVGTKDDVSAVKKVGCCS 216
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 145/215 (67%), Positives = 173/215 (80%), Gaps = 4/215 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR H D+NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 123 LVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
Query: 182 LAAQEAASSTG-LPQGTTINVANLSGNVKGKACCS 215
L E G LP+G TINV + VK CCS
Sbjct: 183 L---EVGDDPGALPKGQTINVKDDVSAVKKVGCCS 214
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 149/218 (68%), Positives = 175/218 (80%), Gaps = 5/218 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKL 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT+ TF+NV RWL+EL+DH DSNIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKS L HLRAV+A+D Q +EKEGL F+ETSALE+ NVE AF+ IL IY ++SKK
Sbjct: 121 MLVGNKSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQILTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSG--NVKGKACCS 215
AL E S+ +P +G TI+V N K CCS
Sbjct: 181 ALDVGEDPSA--VPGKGQTISVGNKDDVTATKKVGCCS 216
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 178/211 (84%), Gaps = 5/211 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+KRQT+DNVTRWL+ELRDHAD+NIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 186 EAA-SSTGLPQGTTINVA-NLSGNVKGKACC 214
+AA + TG G I++A + + + KG CC
Sbjct: 183 DAAQAPTG---GVKIDMAPSGTPDAKGNKCC 210
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 145/215 (67%), Positives = 172/215 (80%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+V+ +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL+V+GK V
Sbjct: 3 GYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+NV RWL+EL++H D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ED + AE+E L F+ETSALEA NVE AF +L IY I SKK
Sbjct: 123 LVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQ 182
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E +++ +P+G I V N +K CCSN
Sbjct: 183 VEAGEDGNAS-VPKGEKIEVKNDVSALKKLGCCSN 216
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 176/218 (80%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ D +YDYLFK+VLIGDSGVGKSN+L+RFTRNEF LESKSTIGVEFATR+++V+ K
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+EL+DH D+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALEA+NVE AF +L IY ++SKK
Sbjct: 121 MLVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TINV + VK CCS+
Sbjct: 181 ALDIGDDPAAP--PRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 174/213 (81%), Gaps = 6/213 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALL YD+TK QTFDNVTRWL+ELRDHAD+NIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV +DA+ A + GLSF+ETSAL+A NVE AFQ L +IY I+S KAL
Sbjct: 123 KSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKAL--D 180
Query: 186 EAASSTGLP-QGTTINVAN---LSGNVKGKACC 214
A S G P QGT+I +++ G+ K CC
Sbjct: 181 NDAGSAGAPGQGTSIPLSSSNPPGGDAKKGQCC 213
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 176/218 (80%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ + +YDYLFK+VLIGDSGVGKSN+L+RFTRNEF LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWLREL+DH D+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV +EDA+ AE+E F+ETSALEA+NVE AF +L IY ++SKK
Sbjct: 121 MLVGNKADLRHLRAVQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TI+V + VK ACCS+
Sbjct: 181 ALDIGDDPAAP--PKGKTISVGSKDDVSAVKKSACCSS 216
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 145/215 (67%), Positives = 172/215 (80%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ + +YDYLFK V+IGDSGVGKSN+LSRFT+NEFCLESKSTIGVEFATR+LQV+GK V
Sbjct: 8 AYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVV 67
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TFDNV RWL+ELRDH DS+IV+M
Sbjct: 68 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDSSIVVM 127
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED Q AE E L F+ETSAL+A NV+ AF +L IY I S+K
Sbjct: 128 LVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKT 187
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A + SS +G INV + ++K CCS+
Sbjct: 188 VDAGDDGSSA-PSKGENINVKDDVSSLKRAGCCSS 221
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 172/215 (80%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+LQV+GK V
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ++ + AE+E L F+ETSALE+ NVE AF +L IY I+SK+A
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRA 183
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E A+S G +G IN+ + VK CCS+
Sbjct: 184 VEAGEDAAS-GPGKGEKINIKDDVSAVKKGGCCSS 217
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 175/217 (80%), Gaps = 4/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GK
Sbjct: 1 MAYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKL 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+EL+DH DSNIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR V+ ED Q +EKEGL F+ETSALE++NVE +F+ IL IY ++SKK
Sbjct: 121 MLVGNKSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGK-ACCS 215
AL E S+ +P +G TINV+ K CC
Sbjct: 181 ALDVGEDPSA--VPGKGQTINVSKDDVTATKKVGCCP 215
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 173/216 (80%), Gaps = 4/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ ED+ AE+E F+ETSALE++NVE AF +L IY ++SKKA
Sbjct: 123 LVGNKADLRHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L + T LP+G TI+V + VK CCS
Sbjct: 183 LEIGD--DPTALPKGQTIDVGSRDDVSAVKKSGCCS 216
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 172/215 (80%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+V+ +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL+V+GK +
Sbjct: 3 GYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+NV RWL+EL++H D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ED + AE+E L F+ETSALEA NVE AF +L IY I SKK
Sbjct: 123 LVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQ 182
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E +++ +P+G I V N +K CCSN
Sbjct: 183 VEAGEDGNAS-VPKGEKIEVKNDVSALKKLGCCSN 216
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 175/218 (80%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+ELRDH D+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALE++NVE AF +L IY ++SKK
Sbjct: 121 MLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TINV VK CCS+
Sbjct: 181 ALDIGDDPAAP--PRGQTINVGGKDDVSAVKKSGCCSS 216
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 172/215 (80%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+LQV+GK V
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ++ + AE+E L F+ETSALE+ NVE AF +L IY I+SK+A
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVSKRA 183
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E A+S G +G IN+ + VK CCS+
Sbjct: 184 VEAGEDAAS-GPGRGEKINIKDDVSAVKKGGCCSS 217
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 175/217 (80%), Gaps = 4/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GK
Sbjct: 1 MAYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKL 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+EL+DH DSNIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR V+ ED Q +EKEGL F+ETSALE++NVE +F+ IL IY ++SKK
Sbjct: 121 MLVGNKSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSGNVKGK-ACCS 215
AL E S+ +P +G TINV+ K CC
Sbjct: 181 ALDVGEDPSA--VPGKGQTINVSKDDVTATKKVGCCP 215
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 172/216 (79%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA K EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT
Sbjct: 1 MATKDSDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV +D++ AEK LSF+ETSAL+A NVE AFQ IL +IYHI+S+K
Sbjct: 121 MLVGNKSDLRHLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILTEIYHIVSQK 180
Query: 181 ALAAQE--AASSTGLPQGTTINVANLSGNVKGKACC 214
+ + A T Q T+ + + + K CC
Sbjct: 181 TIVNDDHVAKVPTSNVQTITVAPSEATDDKKKGGCC 216
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 173/216 (80%), Gaps = 4/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ EDA +E+E F+ETSALE+LNVE AF +L IY ++SKKA
Sbjct: 123 LVGNKADLRHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L + ++ LP+G TINV + VK CCS
Sbjct: 183 LEIGDDPAA--LPKGQTINVGSRDDVSAVKKAGCCS 216
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 174/216 (80%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ + +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L ++GK +
Sbjct: 3 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ T++NV +WL+ELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ EDA+ AE E L F+ETSALEA NV+ AF +L IYHI+SKKA
Sbjct: 123 LVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKA 182
Query: 182 LAAQ-EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ +AA+S + +G I+++ VK CCS+
Sbjct: 183 METNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V+GK +
Sbjct: 3 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AEKE L F+ETSALEA NVE AF +L +Y+++SKKA
Sbjct: 123 LVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQVYNVVSKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ + +++ +P +G I+V +K CCS+
Sbjct: 183 METSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 169/210 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKTVKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSFLETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ +I V K + C S
Sbjct: 185 RDNDMSPSNNVVSIQVQPTENKPKMQCCQS 214
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 169/216 (78%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
YK D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEF T++L ++GK +
Sbjct: 3 GYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+ RWL+ELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL V+ ED + AEKE L F+ETSALEA NVE AF +L IY I+SK+A
Sbjct: 123 LIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ A + AS++ P QG TINV S + CCSN
Sbjct: 183 VEAGDRASTSVAPSQGQTINVNEDSSVLNRYRCCSN 218
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 176/218 (80%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ D +YDYLFK+VLIGDSGVGKSN+L+RFTRNEF LESKSTIGVEFATR+++V+ K
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+EL+DH D+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALE++NVE AF +L IY ++SKK
Sbjct: 121 MLVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TINV + VK CCS+
Sbjct: 181 ALDIGDDPAAP--PRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/215 (69%), Positives = 173/215 (80%), Gaps = 7/215 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKTVKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL HLRAV ++A+ AE+ LSF+ETSAL++ NVE AF IL +IY I+S+K+L
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQKSL-PD 183
Query: 186 EAASSTGLPQGTTINVANL----SGNVKGKACCSN 216
S G G+TI++ + SGN K CC+N
Sbjct: 184 SGNSGAGPDDGSTIDIGSTVTENSGN--KKPCCNN 216
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/206 (71%), Positives = 168/206 (81%), Gaps = 3/206 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NVTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ A + GLSF+ETSAL+A NVE AFQTIL DIY I+S K+L E++
Sbjct: 127 LKHLRAVPTDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSL---ESS 183
Query: 189 SSTGLPQGTTINVANLSGNVKGKACC 214
S+ P I+V KG CC
Sbjct: 184 STNIEPPTQGISVTAPEPADKGGKCC 209
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 176/211 (83%), Gaps = 3/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S+KAL
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNG 182
Query: 186 EAASSTGLPQGTTINVANLS--GNVKGKACC 214
E+A + + GT I+++ + G KG CC
Sbjct: 183 ESAQAN-IGAGTNISLSKPADDGAAKGGKCC 212
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 171/215 (79%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+V+ +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRT +V+GK V
Sbjct: 3 GYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+NV RWL+EL++H D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ED + AE+E L F+ETSALEA NVE AF +L IY I SKK
Sbjct: 123 LVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQ 182
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E +++ +P+G I V N +K CCSN
Sbjct: 183 VEAGEDGNAS-VPKGEKIEVKNDVSALKKLGCCSN 216
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 172/215 (80%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL V+ K +
Sbjct: 3 GYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T++ TF+NV RWL+ELR+H D+NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AEKE L F+ETSALEA NVE AF +L IYHI+SKKA
Sbjct: 123 LVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ E +++ +G I++ N +K CCS+
Sbjct: 183 VEVAENGTTSVPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 175/216 (81%), Gaps = 4/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++V+ K +
Sbjct: 3 AYRADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVL 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+N+ RWL+ELRDH D+NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ E+A AE+E F+ETSALE++NVE AF +L IYH++SKKA
Sbjct: 123 LVGNKADLRHLRAVSTEEATAFAEREKTFFMETSALESMNVENAFTEVLTQIYHVVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L + ++ LP+G TINV + VK CCS
Sbjct: 183 LEIGDDPAA--LPKGQTINVGSRDDVSAVKKDGCCS 216
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/215 (67%), Positives = 170/215 (79%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ + +YDYLFK V+IGDSGVGKSN+LSRFT+NEFCLESKSTIGVEFATR+LQV+GK V
Sbjct: 9 AYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVV 68
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TFDNV RWL+ELRDH D +IV+M
Sbjct: 69 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDHTDPSIVVM 128
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED Q AE E L F+ETSAL+A NV+ AF +L IY I S+K
Sbjct: 129 LVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFAEVLTQIYQIASRKT 188
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E S+ +G INV + +K CCSN
Sbjct: 189 VDAGEDGSAA-PSKGEKINVKDDVSALKRVGCCSN 222
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V+GK +
Sbjct: 3 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AE+E L F+ETSALEA NV+ AF +L IY I+SKKA
Sbjct: 123 LIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ + +++ +P +G I+V+ +K CCS+
Sbjct: 183 METGDEGAASAVPSKGEKIDVSKDVSAMKRVGCCSS 218
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 174/216 (80%), Gaps = 4/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ ED+ AE+E F+ETSALE+LNVE AF +L IY ++SKKA
Sbjct: 123 LVGNKADLRHLRAVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L + ++ LP+G TINV + VK CCS
Sbjct: 183 LEIGDDPAA--LPKGQTINVGSRDDVSAVKKGGCCS 216
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 175/216 (81%), Gaps = 3/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+LQV+GK +
Sbjct: 7 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVI 66
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TFDNV RWLRELRDH D +IV+M
Sbjct: 67 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVM 126
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ +DA+ AE E + F+ETSAL+A NV+ +F +L IY I+SKK
Sbjct: 127 LVGNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKT 186
Query: 182 L-AAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A++E A++ G +G INV + +K CCSN
Sbjct: 187 VEASEEGAAAPG--KGEKINVKDDVSAMKRVGCCSN 220
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 174/218 (79%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ D +YDYLFK+VLIGDSGVGKSN+L+RFTRNEF LESKSTIGVEFATR+++V+ K
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+EL+DH D+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV EDA+ AE+E F ETSALEA+NVE AF +L IY ++SKK
Sbjct: 121 MLVGNKADLRHLRAVPVEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TINV + VK CCS+
Sbjct: 181 ALDIGDDPAAP--PRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/209 (71%), Positives = 172/209 (82%), Gaps = 1/209 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFKIVLIGDSGVGKSN+LSRFTRN F L+SKSTIGVEFATRT+QVEGK VKAQIWD
Sbjct: 14 EYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWD 73
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYD+TK TF+NV RWL+ELRDHADSNIV+M+ GNK
Sbjct: 74 TAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKI 133
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK-ALAAQE 186
DL HLR+V+ EDA AE+EGLSF+ETSAL+A NV+KAFQT+L +IY IISKK A +
Sbjct: 134 DLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKALAADEA 193
Query: 187 AASSTGLPQGTTINVANLSGNVKGKACCS 215
A + + +G +I V+ + CCS
Sbjct: 194 GAGAGAVREGQSIQVSATDSSSFTSRCCS 222
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/215 (67%), Positives = 173/215 (80%), Gaps = 5/215 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VEGKT+KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAIT+AYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 64 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHTTYENVERWLKELRDHADNNIVIMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV EDA+ AE++ LSF+ETSAL++ NVE AFQ IL +IY I+S+K L
Sbjct: 124 KSDLRHLRAVPTEDARNYAERQSLSFIETSALDSTNVETAFQNILTEIYKIVSQKQLGDS 183
Query: 186 EAASSTGLPQGTTINVA---NLSGNVKGKACCSNQ 217
+ LP +++ + GN + K+ C NQ
Sbjct: 184 DRGGD--LPDNDVVDIHVPDSTPGNQRKKSGCCNQ 216
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 170/216 (78%), Gaps = 3/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L V+ K +
Sbjct: 3 GYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV WL+ELR+H D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV EDA+ AEKE L F+ETSALEA NVE AF +L I+HI+SKKA
Sbjct: 123 LVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ A A+ S +P +G I++ VK CCSN
Sbjct: 183 MEA--ASESANVPSKGDKIDIGKDVSAVKKGGCCSN 216
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 171/215 (79%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ + +YDYLFK V+IGDSGVGKSN+LSRFT+NEFCLESKSTIGVEFATR+LQV+GK V
Sbjct: 8 AYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVV 67
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TFDNV RWL+ELRDH D +IV+M
Sbjct: 68 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVM 127
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED Q AE E L F+ETSAL+A NV+ AF +L IY I S+K
Sbjct: 128 LVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKT 187
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A + SS +G INV + ++K CCS+
Sbjct: 188 VDAGDDGSSA-PSKGENINVKDDVSSLKRAGCCSS 221
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 174/217 (80%), Gaps = 4/217 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDY FK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRADDDYDYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ ED+ AE+E F+ETSALE+LNVE AF +L IY ++SKKA
Sbjct: 123 LVGNKADLRHLRAVSTEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
L + ++ LP+G TINV + VK CCS+
Sbjct: 183 LEIGDDPAA--LPKGQTINVGSRDDVSAVKKSGCCSS 217
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/219 (67%), Positives = 172/219 (78%), Gaps = 6/219 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + EYDYLFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT+++ EGKT
Sbjct: 1 MASPREDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK TF+NV RWL+ELRDHAD+N VI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV+ E+A AEK L+F+ETSALEA V+ AFQ IL +IY ++S+K
Sbjct: 121 MLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDSAFQRILTEIYKLMSRK 180
Query: 181 ALAAQEAASSTGLPQGTTI-----NVANLSGNVKGKACC 214
+ A+E AS++ LP G +I N K CC
Sbjct: 181 TIQAEENASAS-LPTGNSIAITAENTTESQKKKKKSGCC 218
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/215 (69%), Positives = 176/215 (81%), Gaps = 7/215 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AF IL +IYHI+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQI--H 182
Query: 186 EAASSTG-LPQGT--TINVANLSGNVKGK--ACCS 215
++ SS G P TI+VA + + + K CC+
Sbjct: 183 DSPSSDGSHPSNNVQTIHVAPTTDDDRKKRVQCCN 217
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/216 (68%), Positives = 171/216 (79%), Gaps = 5/216 (2%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V K +
Sbjct: 3 GYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV EDA+ AE E L F+ETSALE+ NVE AF +L IYH++SKKA
Sbjct: 123 LVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ A E S +P +G I+V ++S VK CCSN
Sbjct: 183 MEAGE--DSGNVPSKGEKIDV-DVSA-VKKTGCCSN 214
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/215 (68%), Positives = 173/215 (80%), Gaps = 7/215 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLF++VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKTVKAQI
Sbjct: 5 DEEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL HLRAV ++A+ AE+ LSF+ETSAL++ NVE AF IL +IY I+S+K+L
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSRKSL-PD 183
Query: 186 EAASSTGLPQGTTINVANL----SGNVKGKACCSN 216
S G G+TI++ + SGN K CC+N
Sbjct: 184 SGNSGAGPDDGSTIDIGSTVTENSGN--KKPCCNN 216
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 175/218 (80%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K
Sbjct: 1 MAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+ELRDH D+NIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALE++NVE AF +L IY ++SKK
Sbjct: 121 MLVGNKADLRHLRAVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
AL + ++ P+G TINV VK CCS+
Sbjct: 181 ALDIGDDPAAP--PRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 173/210 (82%), Gaps = 1/210 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFK+VLIGDSGVGKSN+LSRFT+N F L+SKSTIGVEFATRT+QV+ KT+KAQIWD
Sbjct: 14 EYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQIWD 73
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYD+TK TF+NV RWL+ELRDHADSNIV+M+ GNK
Sbjct: 74 TAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNKI 133
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-AAQE 186
DL HLR+VA EDA AE EGL F+ETSAL+A NVEKAFQT+L +IY IISKK L + +
Sbjct: 134 DLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFQTVLAEIYRIISKKPLSSEES 193
Query: 187 AASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ S L +G +I V+ + + CCS+
Sbjct: 194 GSGSGNLREGQSIQVSATNSSALTSRCCSS 223
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 178/216 (82%), Gaps = 2/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT+++Q EGKT
Sbjct: 1 MATRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K TF+NV RWL+ELRDHA++NIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV ++A +E+ L+F+ETSAL+A V+ AFQ IL +IY ++S++
Sbjct: 121 MLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRR 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+AA++ A++ L G TI++ + N + CC+N
Sbjct: 181 NMAAEDGANAPQLSSGQTISLN--AENKPRRNCCNN 214
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 176/215 (81%), Gaps = 3/215 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ + +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DS+IVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ EDA+ AEKE F+ETSALE+ NVE AF +L IYH++S+KA
Sbjct: 123 LVGNKADLGHLRAVSTEDAKAYAEKESTFFIETSALESTNVENAFTEVLTQIYHVVSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVA-NLSGNVKGKACCS 215
L + A++ +P+G TINV + +K CCS
Sbjct: 183 LETGDEAAT--VPKGQTINVGKDDVSAIKIGGCCS 215
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 170/214 (79%), Gaps = 1/214 (0%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ + +YDYLFK VLIGDSGVGKSN+LSRFT+NEFCLESKSTIGVEFATR++QV+GK VK
Sbjct: 9 YRAEDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVK 68
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TFDNV RWL+ELRDH D +IV+M+
Sbjct: 69 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVML 128
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNKSDL HL AV+ ED + AE E L F+ETSAL+A NVE AF +L IY +SKK +
Sbjct: 129 VGNKSDLRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTV 188
Query: 183 AAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
A + S+ + +G INV + +K CCSN
Sbjct: 189 EASDDGSNAPI-KGEKINVKDDVSALKRIGCCSN 221
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/218 (67%), Positives = 174/218 (79%), Gaps = 5/218 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKL 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT+ TF+NV RWL+EL+DH DSNIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKS L HLRAV+A+D Q +EKEGL F+ETSALE+ NVE AF+ I IY ++SKK
Sbjct: 121 MLVGNKSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQIPTQIYRVVSKK 180
Query: 181 ALAAQEAASSTGLP-QGTTINVANLSG--NVKGKACCS 215
AL E S+ +P +G TI+V N K CCS
Sbjct: 181 ALDVGEDPSA--VPGKGQTISVGNKDDVTATKKVGCCS 216
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 172/208 (82%), Gaps = 1/208 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFK+VLIGDSGVGKSN+LSRFT+N F L+SKSTIGVEFATRT QVEGKT+KAQIWD
Sbjct: 15 EYDYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKAQIWD 74
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYD+TK TF+NV RWL+ELRDHADSNIVIM+ GNK+
Sbjct: 75 TAGQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLIGNKT 134
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLR+VA + A AE EGLSF+ETSAL+A NV+KAFQT+L +I+ +ISKKAL +++
Sbjct: 135 DLRHLRSVATDKAAGFAEWEGLSFIETSALDATNVDKAFQTVLAEIHRVISKKALTTEDS 194
Query: 188 ASSTGLPQGTTINVANLSGNVKGKACCS 215
+ + +G +I V+ CCS
Sbjct: 195 GAGV-VGEGQSILVSGGEPTSVSSRCCS 221
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/209 (70%), Positives = 173/209 (82%), Gaps = 7/209 (3%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NVTRWL+ELRDHAD+NIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADTNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ A + GLSF+ETSAL+A NVE AFQTIL DIY I+S K+L E++
Sbjct: 127 LKHLRAVPTDEAKTFASENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSL---ESS 183
Query: 189 SSTGLPQGTTINVANLSGNVK---GKACC 214
+S P +I+V ++ + K GK CC
Sbjct: 184 TSNIEPPKESISVG-ITQDTKQQQGKTCC 211
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/207 (70%), Positives = 170/207 (82%), Gaps = 4/207 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NVTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ A + LSF+ETSAL+A NVE AFQTIL DIY I+S K+L E++
Sbjct: 127 LKHLRAVPTDEAKSFAAENNLSFIETSALDASNVESAFQTILTDIYRIVSSKSL---ESS 183
Query: 189 SSTGLPQGTTINV-ANLSGNVKGKACC 214
++ P +++ V A + +G CC
Sbjct: 184 ANPIEPPNSSVTVSATVDPTPQGNKCC 210
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 171/215 (79%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+LQV+GK V
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ++ + AE+E L F+ETSALE+ NVE AF +L IY I+ K+A
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVDKRA 183
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E A+S G +G IN+ + VK CCS+
Sbjct: 184 VEAGEDAAS-GPGRGEKINIKDDVSAVKKGGCCSS 217
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ VEGKTVKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++N RWL+EL+DHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSFLETSAL++ NVE AFQTIL +IY I+S++ ++ +
Sbjct: 125 KSDLRHLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQMSGR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
S + + I V + K ACC N
Sbjct: 185 GDDSFSPSSKVVPITVQPTQNSGKQSACCQN 215
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/207 (70%), Positives = 167/207 (80%), Gaps = 3/207 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATRT+ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NVTRWL+ELRDHAD+NIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYANVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV E+A+ A + LSF+ETSAL+A NVE AFQTIL DIY I+S K L ++++
Sbjct: 127 LKHLRAVPTEEAKTFATENELSFIETSALDASNVESAFQTILTDIYRIVSSKTL--EQSS 184
Query: 189 SSTGLPQGTTINVA-NLSGNVKGKACC 214
P TI VA + + G CC
Sbjct: 185 DPIKAPTSDTIPVAIDSAAPASGSKCC 211
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 172/215 (80%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+LQV+GK +
Sbjct: 7 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVI 66
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TFDNV RWLRELRDH D +IV+M
Sbjct: 67 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVM 126
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ +DA+ AE E + F+ETSAL+A NV+ AF +L IY I+SKK
Sbjct: 127 LIGNKSDLRHLVAVSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQIVSKKT 186
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E ++ G +G INV + +K CCSN
Sbjct: 187 VEALEEGAA-GPGKGEKINVKDDVSAMKRVGCCSN 220
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 167/211 (79%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ VEGKTVKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++N RWL+EL+DHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ LAEK GLSFLETSAL++ NVE AFQTIL IY+I+S++ + +
Sbjct: 125 KSDLRHLRAVPMDEAKALAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMTGR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I V K ACC N
Sbjct: 185 SDTDFSPNSNVVPITVQPTQNAAKSSACCQN 215
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 149/224 (66%), Positives = 179/224 (79%), Gaps = 9/224 (4%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M+ + D EYDYLFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q +GK
Sbjct: 1 MSVRPDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KR +F+N RWL+ELRDHAD NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV E+ Q A+ GLSF+ETSAL+A +VE+AF IL DIY ++ K+
Sbjct: 121 MLVGNKSDLKHLRAVTTEEGQQYADARGLSFIETSALDASHVEEAFVRILTDIYRLVHKR 180
Query: 181 ALAAQE---AASSTG----LPQGTTINVANLSGNVKG--KACCS 215
LA+ + A S++G +G TI+V NLS + + + CCS
Sbjct: 181 HLASGDPTVAKSASGAVYQAGRGETISVGNLSHDNRSSKRKCCS 224
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 170/218 (77%), Gaps = 17/218 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 28 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 87
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 88 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 147
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 148 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 207
Query: 186 EAASSTGLPQGTTINVANLSG-------NVKG--KACC 214
P+G TI N+ N +G K CC
Sbjct: 208 --------PEGDTIRPQNVEPIDVKPTMNSEGMRKPCC 237
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 171/216 (79%), Gaps = 5/216 (2%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V K +
Sbjct: 3 GYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV EDA+ AE E L F+ETSALE+ NVE AF +L IYH++SKKA
Sbjct: 123 LVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKA 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ A + S +P +G I+V ++S VK CCSN
Sbjct: 183 MEAGQ--DSGNVPSKGEKIDV-DVSA-VKKTGCCSN 214
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE AFQ IL +IYHI+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNSLSFIETSALDSTNVETAFQNILTEIYHIVSQKQIRDS 184
Query: 186 EAASSTGLPQGTTINVANLS-GNVKGK-ACC 214
+ TI VA + + K K ACC
Sbjct: 185 PGDDESPSTNVQTITVAPTTDADTKKKLACC 215
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 147/219 (67%), Positives = 172/219 (78%), Gaps = 6/219 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + EYDYLFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT+++ EGKT
Sbjct: 1 MASPREDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK TF+NV RWL+ELRDHAD+N VI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV+ E+A AEK L+F+ETSALEA V+ AFQ IL +IY ++S+K
Sbjct: 121 MLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDTAFQRILTEIYKLMSRK 180
Query: 181 ALAAQEAASSTGLPQGTTI-----NVANLSGNVKGKACC 214
+ A+E A+++ LP G +I N K CC
Sbjct: 181 TIQAEENATAS-LPTGNSIAITAENTTESQKKKKKSGCC 218
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 149/215 (69%), Positives = 175/215 (81%), Gaps = 7/215 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMQVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQ IL +IYHI+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQI--H 182
Query: 186 EAASSTG-LPQGT--TINVANLSGNVKGK--ACCS 215
++ +S G P TI+VA + + K CC+
Sbjct: 183 DSPTSDGSHPSNNVQTIHVAPTTDEDRRKRVQCCN 217
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 148/218 (67%), Positives = 170/218 (77%), Gaps = 17/218 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANLSG-NVKG--------KACC 214
P+G TI N+ +VK K CC
Sbjct: 185 --------PEGDTIRPQNVEPIDVKPTMSSEGMRKQCC 214
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 172/216 (79%), Gaps = 4/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAVA DA+ AE+E F+ETSALE+LNV+ AF +L IY ++S+K
Sbjct: 123 LVGNKADLRHLRAVATNDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKT 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L + ++ LP+G TINV + VK CCS
Sbjct: 183 LEIGDDPAA--LPKGQTINVGSRDDVSAVKKSGCCS 216
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 148/218 (67%), Positives = 170/218 (77%), Gaps = 17/218 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANLSG-------NVKG--KACC 214
P+G TI N+ N +G K CC
Sbjct: 185 --------PEGDTIRPQNVEPIDVKPTMNSEGMRKQCC 214
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 173/210 (82%), Gaps = 3/210 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++++ KTVKAQI
Sbjct: 5 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGAL+VYD+T++ TF+NV RWL+ELRDH D+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL HLRAV E+A AE+E F+ETSALE+LNV+ AF +L +IY+++S+K L +
Sbjct: 125 KADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRKTL--E 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ LPQG TIN+ ++S VK CCS
Sbjct: 183 KGNDPGALPQGQTINLGDVSA-VKKPGCCS 211
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 173/216 (80%), Gaps = 5/216 (2%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV EDA AE+E F+ETSALE+LNVE AF +L I+ ++S+KA
Sbjct: 123 LVGNKADLRHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVA--NLSGNVKGKACCS 215
L + ++ LP+G TI V ++S VK CCS
Sbjct: 183 LDVGDDPAA--LPKGQTITVGKDDVSA-VKKVGCCS 215
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 168/211 (79%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+ IVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+ ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQMSDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKMQCCQN 215
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 170/215 (79%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+LQV+GK +
Sbjct: 7 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVI 66
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TFDNV RWLRELRDH D +IV M
Sbjct: 67 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCM 126
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AE E + F+ETSAL+A NV+ AF +L IY I++KK
Sbjct: 127 LIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKP 186
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E S+ G +G INV + +K CCSN
Sbjct: 187 VEAPEDGSA-GPGKGEKINVKDDVSAMKRVGCCSN 220
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 168/211 (79%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QVE KTVKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVESKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++N RWL+EL+DHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSFLETSAL++ NVE AFQTIL IY+I+S++ ++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
A + I V K ACC N
Sbjct: 185 SDADFSPSSNVVPITVQPTQNASKQGACCQN 215
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 170/215 (79%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+LQV+GK +
Sbjct: 7 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVI 66
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TFDNV RWLRELRDH D +IV M
Sbjct: 67 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCM 126
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AE E + F+ETSAL+A NV+ AF +L IY I++KK
Sbjct: 127 LIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKP 186
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E S+ G +G INV + +K CCSN
Sbjct: 187 VEAPEDGSA-GPGKGEKINVKDDVSAMKRVGCCSN 220
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 173/216 (80%), Gaps = 4/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ +DA+ AE+E F+ETSALE+LNV+ AF +L IY ++S+K
Sbjct: 123 LVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKT 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L + ++ LP+G TINV + VK CCS
Sbjct: 183 LEIGDDPAA--LPKGQTINVGSRDDVSAVKKSGCCS 216
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 173/217 (79%), Gaps = 4/217 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRA+ EDA A+++ F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 123 LVGNKADLRHLRAITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
L + ++ LP+G TINV + VK CCS+
Sbjct: 183 LDIGDDPAA--LPRGQTINVGSRDDVSAVKKAGCCSS 217
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/218 (67%), Positives = 170/218 (77%), Gaps = 17/218 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 39 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 98
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 99 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 158
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 159 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 218
Query: 186 EAASSTGLPQGTTINVANLSG-------NVKG--KACC 214
P+G TI N+ N +G K CC
Sbjct: 219 --------PEGDTIRPQNVEPIDVKPTMNSEGMRKQCC 248
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 176/209 (84%), Gaps = 3/209 (1%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + ++
Sbjct: 125 DLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDS 184
Query: 188 ASSTGLPQGTTINVANLSGN--VKGKACC 214
A +T + GT I+++ + + KG CC
Sbjct: 185 AQAT-IGAGTNISLSKPADDDASKGGKCC 212
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 170/214 (79%), Gaps = 1/214 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+LQV+GK V
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ++ + AE+E L F+ETSALE+ NVE AF +L IY I+SK++
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRS 183
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ A + A S G +G IN+ + VK CCS
Sbjct: 184 VEAGDDAGS-GPGKGEKINIKDDVSAVKKGGCCS 216
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/217 (66%), Positives = 173/217 (79%), Gaps = 4/217 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YD+L+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH ++NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALEALNVE AF +L IY + SKKA
Sbjct: 123 LVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
L + T LP+G +INV + VK CCS+
Sbjct: 183 LDIGD--DHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 170/215 (79%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL V+ K +
Sbjct: 3 GYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H DSNIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HL AV+ ED + AEKE L F+ETSALEA NVE AF +L IYHI+SKK
Sbjct: 123 LVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKT 182
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ E +++ +G I++ N +K CCS+
Sbjct: 183 VEGAENGNASVPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 175/209 (83%), Gaps = 3/209 (1%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + +
Sbjct: 125 DLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDG 184
Query: 188 ASSTGLPQGTTINVANLSGN--VKGKACC 214
A +T + GT I+++ + + KG CC
Sbjct: 185 AQAT-IGAGTNISLSKPADDDASKGGKCC 212
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 171/215 (79%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+LQV+GK V
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+N RWL+ELRDH D NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVVM 123
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ++ + AE+E L F+ETSALE+ NVE AF +L IY I+SK+A
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRIVSKRA 183
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ A E S++G +G IN+ + VK CCS+
Sbjct: 184 VEAGE-DSASGPGKGEKINMKDDVSAVKKGGCCSS 217
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 171/211 (81%), Gaps = 4/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QTF NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV +DA+ A + GLSF+ETSAL+A NVE AFQ L +IY I+S KAL
Sbjct: 123 KSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALDQD 182
Query: 186 EAASSTGLPQGTTINV--ANLSGNVKGKACC 214
+ + G QGT+I + + +G K CC
Sbjct: 183 TSGPAPG--QGTSIPLSASTPAGEAKKGQCC 211
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 172/211 (81%), Gaps = 5/211 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGK+N+LSRFTRNEF LESKSTIGVEFATR++QV+ KTVKAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K QT++NV RWL+ELRDHADSNIV+M+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A GLSF+ETSAL++ NVE AFQ IL +IY I+S KAL
Sbjct: 124 KSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKAL--- 180
Query: 186 EAASSTGLPQ-GTTINVANLSGNVK-GKACC 214
E+++ P G TINV + + K G CC
Sbjct: 181 ESSNDVIRPTAGQTINVNQPTEDEKQGGGCC 211
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 171/218 (78%), Gaps = 17/218 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANL-------SGNVKG--KACC 214
P+G TI N+ + N +G K CC
Sbjct: 185 --------PEGDTIRPQNVEQIEVKPTMNAEGMRKQCC 214
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/210 (70%), Positives = 172/210 (81%), Gaps = 7/210 (3%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T++NVTRWL+ELRDHAD+NIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV+ E+A+ A ++GLSF+ETSAL+A NVE AFQ IL DIY I+S K+L E++
Sbjct: 127 LKHLRAVSTEEAKAFATEQGLSFIETSALDASNVESAFQNILTDIYRIVSSKSL---ESS 183
Query: 189 SSTGLPQ-GTTINV---ANLSGNVKGKACC 214
P G TI V A+ G +G CC
Sbjct: 184 GDVIKPSGGETILVTPTADDGGAKQGGKCC 213
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/215 (65%), Positives = 172/215 (80%), Gaps = 1/215 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL V+GK +
Sbjct: 3 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AE+E L F+ETSALEA NVE AF +L IY I+SKK+
Sbjct: 123 LVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKS 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
+ + +++ +P +G INV + + +K CCS
Sbjct: 183 VEGGDEGAASSVPAKGERINVKDDASALKRVGCCS 217
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 174/217 (80%), Gaps = 4/217 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YD+L+K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH ++NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALEALNVE AF +L IY + SKKA
Sbjct: 123 LVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
L + ++ LP+G +INV + VK CCS+
Sbjct: 183 LDIGDDPAT--LPKGQSINVGSKDDVSEVKKVGCCSS 217
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 170/218 (77%), Gaps = 17/218 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANLSG-------NVKG--KACC 214
P+G TI N+ N +G K CC
Sbjct: 185 --------PEGDTIRPQNVEPIDVKPTMNSEGMRKQCC 214
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 173/210 (82%), Gaps = 5/210 (2%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + GLSF+ETSAL+A NVE AFQ L +IY I+S KA+ E
Sbjct: 125 DLRHLRAVPTEEAKEFASQNGLSFIETSALDASNVELAFQNELTEIYRIVSSKAIEQGEP 184
Query: 188 ASSTGLPQGTTINV--ANLSGNVKGKA-CC 214
+ G QGT+I + ++ G+ K CC
Sbjct: 185 SQGPG--QGTSIPLGPSHPPGDASKKGQCC 212
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 170/211 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QVEGKTVKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++N RWL+EL+DHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSFLETSAL++ NVE AFQTIL IY+I+S++ ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ + I+V + +CC N
Sbjct: 185 TDSDFSPASNVVPISVEPTQTSSSKGSCCQN 215
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 169/208 (81%), Gaps = 4/208 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
+DYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NVTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ A + LSF+ETSAL+A NVE AFQTIL DIY I+S K+L +++A
Sbjct: 127 LKHLRAVPTDEAKAFAAENALSFIETSALDASNVESAFQTILTDIYRIVSSKSL--EQSA 184
Query: 189 SSTGLPQGTTINVANL--SGNVKGKACC 214
P G +I V+ + +G CC
Sbjct: 185 DPIKPPTGDSITVSPSVDTNQQQGGKCC 212
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 170/214 (79%), Gaps = 1/214 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+LQV+GK V
Sbjct: 4 GYREEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ++ + AE+E L F+ETSALE+ NVE AF +L IY I+SK++
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRS 183
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ A + A S G +G IN+ + VK CCS
Sbjct: 184 VEAGDDAGS-GPGKGEKINIKDDVSAVKKGGCCS 216
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 172/216 (79%), Gaps = 3/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+LQV+GK +
Sbjct: 7 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVI 66
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TFDNV RWLRELRDH D +IV+M
Sbjct: 67 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQSIVVM 126
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ +DA+ AE E + F+ETSAL+A NV+ +F +L IY I+SKK
Sbjct: 127 LVGNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKT 186
Query: 182 L-AAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ +E A + G +G INV + +K CCSN
Sbjct: 187 VEVPEEGAVAPG--KGEKINVKDDVSAMKRVGCCSN 220
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/189 (75%), Positives = 161/189 (85%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VE KT+KAQI
Sbjct: 4 DDEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVENKTIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+AQ AE+ LSF+ETSALEA NV+ AF TIL IYHI+S+K +AA
Sbjct: 124 KSDLKHLRAVPTEEAQKFAEENDLSFIETSALEAENVDDAFTTILTKIYHIVSQKQVAAP 183
Query: 186 EAASSTGLP 194
E + P
Sbjct: 184 EKPDTVIDP 192
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/210 (70%), Positives = 171/210 (81%), Gaps = 7/210 (3%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K QT++NVTRWL+ELRDHAD+NIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV+ ++A+ A + GLSF+ETSAL+A NVE AFQ IL DIY I+S K+L E++
Sbjct: 127 LKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSL---ESS 183
Query: 189 SSTGLPQ-GTTINVANLS---GNVKGKACC 214
P G TI VA + G G CC
Sbjct: 184 GDVIKPSGGETILVAPTADDGGAKSGSKCC 213
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 173/214 (80%), Gaps = 2/214 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT+++Q EGKT
Sbjct: 1 MGSRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K TF+NV RWL+ELRDHA++NIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV ++A +E+ L+F+ETSAL+A V+ +FQ IL +IY ++S++
Sbjct: 121 MLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTSFQRILTEIYRLMSRR 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
+AA+E + L G TI++ N N + CC
Sbjct: 181 NMAAEEGGNQPQLSTGQTISLNN--DNKPRRNCC 212
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 173/217 (79%), Gaps = 4/217 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DS+IVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK DL HL AV+ +DA+ AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 123 LVGNKGDLRHLXAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
L + ++ LP+G TINV VK CCS+
Sbjct: 183 LDIGDDPAA--LPKGQTINVGTKDDVSAVKKAGCCSS 217
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 174/217 (80%), Gaps = 4/217 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 501 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIV 560
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DS+IVIM
Sbjct: 561 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIM 620
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK DL HLRAV+ +DA+ AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 621 LVGNKGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKA 680
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
L + ++ LP+G TINV VK CCS+
Sbjct: 681 LDIGDDPAA--LPKGQTINVGTKDDVSAVKKAGCCSS 715
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 171/218 (78%), Gaps = 17/218 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANL-------SGNVKG--KACC 214
P+G TI N+ + N +G K CC
Sbjct: 185 --------PEGDTIRPHNVEQIEVKPTMNAEGMRKQCC 214
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 175/208 (84%), Gaps = 2/208 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + +
Sbjct: 125 DLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDG 184
Query: 188 ASSTGLPQGTTINVANLSGNVKGKA-CC 214
A +T + GT I+++ + + K+ CC
Sbjct: 185 AQAT-IGAGTNISLSKPAEDATAKSGCC 211
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 173/210 (82%), Gaps = 6/210 (2%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSA +A NVE AFQ IL +IY I+S KAL ++
Sbjct: 125 DLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKAL---DS 181
Query: 188 ASSTGLPQ-GTTINVANLSGN--VKGKACC 214
+ +PQ GT I ++N + + K CC
Sbjct: 182 GDTPSMPQTGTNIALSNPTEDSAAKNGKCC 211
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 168/210 (80%), Gaps = 6/210 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YD+LFK+VLIGDSGVGKSN+LSRFTRNEF ++SKSTIGVEFATR++ V+GKT+KAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI+K T+ NV RWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV E+AQ A + LSF+ETSA++A NVE AFQ IL DIY I+S KAL + +A
Sbjct: 127 LRHLRAVPTEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSKAL--ESSA 184
Query: 189 SSTGLPQGTTINVANLSGNVK----GKACC 214
+ G G+TI V S + G CC
Sbjct: 185 DAVGPTSGSTITVTPTSDDASKASGGGKCC 214
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 171/214 (79%), Gaps = 5/214 (2%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+ D EYDYLFK+VLIGD+GVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q EGK +KA
Sbjct: 3 RSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKA 62
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ +FDNV RWL+EL+DHAD+NIVIM+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLV 122
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNKSDL HL+AV +DA AE GLSF+ETSAL+ NVE+AF++IL +IY + SKKAL
Sbjct: 123 GNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKAL- 181
Query: 184 AQEAASSTGLPQGT---TINVANLSGNVKGKACC 214
++ ++S P T IN G + CC
Sbjct: 182 -EKGSTSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/213 (68%), Positives = 169/213 (79%), Gaps = 3/213 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL--A 183
KSDL HLRAV ++A+ +EK GLSF+ETSAL++ NVE AFQ IL +IY I+S+K + +
Sbjct: 125 KSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTEIYLIVSQKQINDS 184
Query: 184 AQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ G P I+ N N K CC N
Sbjct: 185 NNDEEVKDGQPVDIVISSTNPQPN-KQSQCCKN 216
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 171/215 (79%), Gaps = 1/215 (0%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V+ K +K
Sbjct: 4 YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIK 63
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M+
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVML 123
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNKSDL HL AV+ ED + AE+E L F+ETSALEA NV+ AF +L IY I+SKKA+
Sbjct: 124 IGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAM 183
Query: 183 AAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ A+++ +P +G I+V +K CCS+
Sbjct: 184 ETGDNAAASAVPSKGEKIDVNKDVSAMKRVGCCSS 218
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 175/209 (83%), Gaps = 3/209 (1%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV ++A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + +
Sbjct: 125 DLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDG 184
Query: 188 ASSTGLPQGTTINVANLSGN--VKGKACC 214
A +T + GT I+++ + + KG CC
Sbjct: 185 AQAT-IGAGTNISLSKAADDEAAKGGKCC 212
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 173/216 (80%), Gaps = 4/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV +WL+ELRDH D+NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ +DA+ AE+E F+ETSALE+LNV+ AF +L IY ++S+K
Sbjct: 123 LVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKT 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L + ++ LP+G TINV + VK CCS
Sbjct: 183 LEIGDDPAA--LPKGQTINVGSRDDVSAVKKSGCCS 216
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 173/212 (81%), Gaps = 4/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S+KAL
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA---CC 214
++A +T + GT I + + K CC
Sbjct: 183 DSAQAT-IASGTNITLTPPPSDEAAKGGGKCC 213
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 168/209 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QVEGKT+KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++N RWL+EL+DHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSFLETSAL++ NVE AFQTIL IY+I+S++ ++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
+ + I V + ACC
Sbjct: 185 SDSDFSPASNVVPITVEPTQNSSNKGACC 213
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 171/213 (80%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+ +K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVPQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + +KG CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGLKGSKFQCCQN 217
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 172/211 (81%), Gaps = 5/211 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGK+N+LSRFTRNEF LESKSTIGVEFATR++QV+ KTVK+QI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKSQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K QT++NV RWL+ELRDHADSNIV+M+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A GLSF+ETSAL++ NVE AFQ IL +IY I+S KAL
Sbjct: 124 KSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKAL--- 180
Query: 186 EAASSTGLPQ-GTTINVANLSGNVK-GKACC 214
E+++ P G TINV + + K G CC
Sbjct: 181 ESSNDVIRPTAGQTINVNQPTEDEKQGGGCC 211
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 173/216 (80%), Gaps = 4/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ +DA+ AE+E F+ETSALE+LNV+ +F +L IY ++S+K
Sbjct: 123 LVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSRKT 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L + ++ LP+G TINV + VK CCS
Sbjct: 183 LEIGDDPAA--LPKGQTINVGSRDDVSAVKKVGCCS 216
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 170/215 (79%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL V+ K +
Sbjct: 3 GYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H D+NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + AEKE L F+ETSALEA NVE AF +L IY I+SKKA
Sbjct: 123 LVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ E +++ +G I++ N +K CCS+
Sbjct: 183 VEGAENGTASVPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 175/209 (83%), Gaps = 3/209 (1%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + +
Sbjct: 125 DLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDG 184
Query: 188 ASSTGLPQGTTINVANLSGNVKGKA--CC 214
A +T + GT I+++ + + K+ CC
Sbjct: 185 AQAT-IGAGTNISLSKPADDESAKSGKCC 212
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 167/209 (79%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT+DNVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV EDA+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL
Sbjct: 123 KSDLRHLRAVPTEDAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
E + + + ++ + CC
Sbjct: 183 EGGQNPLGERRQVVEISKTQDTETKQGCC 211
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 173/212 (81%), Gaps = 4/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S+KAL
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA---CC 214
++A +T + GT I + + K CC
Sbjct: 183 DSAQAT-IGSGTNITLTPPPSDEAAKGGGKCC 213
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 170/215 (79%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL V+ K +
Sbjct: 3 GYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H DSNIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HL AV+ ED + AEKE L F+ETSALEA NVE AF +L IY I+SKKA
Sbjct: 123 LVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ E +++ +G I++ N +K CCS+
Sbjct: 183 VEGAENGNASVPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 171/208 (82%), Gaps = 5/208 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NVTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ + + GLSF+ETSAL+A NVE AFQTIL DIY I+S K+L E++
Sbjct: 127 LKHLRAVTTDEAKAFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL---ESS 183
Query: 189 SSTGLP--QGTTINVANLSGNVKGKACC 214
++ P +G ++ + S +G CC
Sbjct: 184 TNNIEPPKEGISVGPSLDSTATQGSKCC 211
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 171/217 (78%), Gaps = 3/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ K
Sbjct: 1 MAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKV 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV+ ED + AE+E F+ETSALE+ NVE AF +L IY I+SKK
Sbjct: 121 MLVGNKADLRHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSG--NVKGKACCS 215
AL E ++ +G TI+V N +K CCS
Sbjct: 181 ALDVGEDPAAVP-SKGQTIHVGNKDDVTAMKKVGCCS 216
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 169/213 (79%), Gaps = 6/213 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE AFQ IL +IY I+S+K + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQI--R 182
Query: 186 EAASSTGLPQGTTINVANL----SGNVKGKACC 214
+ P G + ++ S + + K CC
Sbjct: 183 NDTDNDPSPSGDNVKPISIAPTDSSDTRKKQCC 215
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 179/215 (83%), Gaps = 3/215 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA +VD EYDYLFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT+++Q EGKT
Sbjct: 1 MASRVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K TF+NV RWL+ELRDHA++NIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV ++A +E+ L+F+ETSAL+A V+ AFQ IL +IY ++S++
Sbjct: 121 MLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRR 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ A+E A++ + G I+++ SG+ K K CC+
Sbjct: 181 NMQAEENANAP-MSAGHKISLSQ-SGD-KKKGCCA 212
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 168/215 (78%), Gaps = 3/215 (1%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ D EYDYLFK+VLIGDSGVGKSN+LS FT+NEF LESKSTIGVEFATR+L V+ K +K
Sbjct: 4 YRADDEYDYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDKVIK 63
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV WL+ELR+H D NIV+M+
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVML 123
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNKSDL HL AV EDA+ AEKE L F+ETSA EA NVE AF +L I+HI+SKKA+
Sbjct: 124 VGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSAFEATNVENAFAEVLTQIHHIVSKKAM 183
Query: 183 AAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
A A+ S +P +G I++ VK CCSN
Sbjct: 184 EA--ASESANVPSKGDKIDIGKDVSAVKKGGCCSN 216
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 12 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 71
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 131
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 132 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 191
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 192 AAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 224
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 148/210 (70%), Positives = 172/210 (81%), Gaps = 7/210 (3%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K QT++NVTRWL+ELRDHAD+NIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV+ ++A+ A + GLSF+ETSAL+A NVE AFQ IL DIY I+S K+L E++
Sbjct: 127 LKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSL---ESS 183
Query: 189 SSTGLPQ-GTTINVANLSGNVKGKA---CC 214
P G TI VA + + K+ CC
Sbjct: 184 GDVIKPSGGETILVAPTADDGGAKSSSKCC 213
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 175/211 (82%), Gaps = 3/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL +
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 186 EAASSTGLPQGTTINVANLSGNV--KGKACC 214
+ A + + GT+++++ + KG CC
Sbjct: 183 DGAQAN-IAAGTSLSLSKPADENADKGGKCC 212
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 175/209 (83%), Gaps = 3/209 (1%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV ++A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + +
Sbjct: 125 DLRHLRAVPTDEAKGFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDG 184
Query: 188 ASSTGLPQGTTINVANLSGN--VKGKACC 214
A +T + GT I+++ + + KG CC
Sbjct: 185 AQAT-IGAGTNISLSKAADDEASKGGKCC 212
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 174/211 (82%), Gaps = 3/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S+KAL
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDQG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK--ACC 214
E+A + + T+ + N S + + K CC
Sbjct: 183 ESAQNPIGGERRTLEITN-SADTEAKQGKCC 212
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 146/218 (66%), Positives = 169/218 (77%), Gaps = 17/218 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AE+ GLSF+ETSAL++ NVE AF IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDEARTFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANLSG-NVKG--------KACC 214
P+G TI N+ +VK K CC
Sbjct: 185 --------PEGDTIRPTNVEAIDVKPTVNTDSVRKQCC 214
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 170/215 (79%), Gaps = 1/215 (0%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V+ K +K
Sbjct: 4 YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIK 63
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M+
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVML 123
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNKSDL HL AV+ ED + AE+E L F+ETSALEA NV+ AF +L IY I+SKKA+
Sbjct: 124 IGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAM 183
Query: 183 AAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ A+++ +P +G I+V K CCS+
Sbjct: 184 ETGDNAAASAVPSKGEKIDVNKDVSAKKRVGCCSS 218
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 170/210 (80%), Gaps = 2/210 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL--A 183
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE AFQ IL +IY I+S+K + +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDS 184
Query: 184 AQEAASSTGLPQGTTINVANLSGNVKGKAC 213
+ S + Q T+ + S + K K C
Sbjct: 185 PDDENSPSNNVQTITVAPTDNSADKKQKCC 214
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ +L +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CC 214
A + I+V S KG CC
Sbjct: 185 SAHDESPGNNVVDISVPPTSDGQKGNKIQCC 215
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 171/213 (80%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + KG CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKGSKLQCCQN 217
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 169/218 (77%), Gaps = 17/218 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAIT+AYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ AE+ GLSF+ETSAL++ NV+ AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVAN---------LSGNVKGKACC 214
P+G TI N +S + K CC
Sbjct: 185 --------PEGDTIRPQNVEPIDVKPTMSSDSVRKQCC 214
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTTDGQKPNKLQCCRN 217
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 171/213 (80%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSANVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + KG CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKGSKLQCCQN 217
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTTDGQKPTKLQCCQN 217
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/194 (73%), Positives = 165/194 (85%), Gaps = 1/194 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMAVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL HLRAV E+A+ +EK GLSF+ETSAL++ NVE AFQ IL +IYHI+S+ + A
Sbjct: 125 KCDLRHLRAVPTEEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQSS-TAN 183
Query: 186 EAASSTGLPQGTTI 199
+ S+ L + TTI
Sbjct: 184 DVPSAPELGERTTI 197
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDY+FK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/216 (64%), Positives = 171/216 (79%), Gaps = 4/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF +ESKSTIGVEFATR++ V+ K +
Sbjct: 3 AYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKII 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQ+WDTAGQERYRAITSAYYRGAVGALLVYDIT+ TF+NV RWL+ELRDH D+N+VIM
Sbjct: 63 KAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV E+A+ +E+E + F+ETSAL+A NVE+AF +L IY ++S+KA
Sbjct: 123 LVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLSG--NVKGKACCS 215
L LP+G TI++ N VK CCS
Sbjct: 183 LDG--TGDPMSLPKGQTIDIGNKDDVTAVKSSGCCS 216
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSG GKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 225 YDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDT 284
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NV+RWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 285 AGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSD 344
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-AAQEA 187
L HLRAV ++A+ A + LSF+ETSAL+A NVE+AFQ IL +IY I+S KAL ++ +
Sbjct: 345 LRHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDDV 404
Query: 188 ASSTGLPQGTTINV---ANLSGNVKGKACC 214
+G G TI V A+ G K CC
Sbjct: 405 IKPSG---GETITVQPSADDGGATKKNGCC 431
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 169/208 (81%), Gaps = 1/208 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + +
Sbjct: 125 DLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDG 184
Query: 188 ASST-GLPQGTTINVANLSGNVKGKACC 214
+T G G ++ KG CC
Sbjct: 185 PQATIGAGPGISLTKPADDSAEKGGKCC 212
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 170/213 (79%), Gaps = 6/213 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE AFQ IL +IY I+S+K + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQKQI--R 182
Query: 186 EAASSTGLPQGTTINVANL----SGNVKGKACC 214
A + P G + ++ S + + + CC
Sbjct: 183 NDADNDPSPSGDNVKAISIAPTDSSDTRKRQCC 215
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSSKLQCCQN 217
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 174/210 (82%), Gaps = 6/210 (2%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NV RWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSA +A NVE AFQ IL +IY I+S KAL + +A
Sbjct: 125 DLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDSGDA 184
Query: 188 ASSTGLPQ-GTTINVANLS--GNVKGKACC 214
+ +PQ GTTI ++ + G +G CC
Sbjct: 185 QA---IPQGGTTIPLSKTADDGAGQGGKCC 211
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 36 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 95
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 96 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 155
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 156 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 215
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 216 AAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 248
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 176/217 (81%), Gaps = 5/217 (2%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRF+RNEF LESKSTIGVEFATR+++V+ K V
Sbjct: 4 GYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIV 63
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDIT+ TF+NV RWL+ELRDH D NIVIM
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIM 123
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ EDA+ AE+E F+ETSALE+LNVE AF +L +IY ++ +KA
Sbjct: 124 LVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKA 183
Query: 182 LAAQEAASSTGLPQGTTINVA--NLSGNVKGKACCSN 216
L + ++ LP+G TINV ++S VK CCS+
Sbjct: 184 LEVGDDPAA--LPKGQTINVGKDDVSA-VKKVGCCSS 217
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 171/211 (81%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A++ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARVFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CC 214
A + I+V + KG CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKGNKLQCC 215
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 171/213 (80%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + +G CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQRGSKLQCCQN 217
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 169/209 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K T++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKNITYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV +DA+ A + LSF+ETSAL+A NVE AFQ IL +IY+I+S K+ A +
Sbjct: 123 KSDLRHLRAVPTDDAKNFAAENHLSFIETSALDATNVELAFQNILTEIYNIVSTKSFAEE 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
+ GT I ++ + K CC
Sbjct: 183 DGKKFDPREGGTNITLSQEGPKGESKGCC 211
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 172/215 (80%), Gaps = 4/215 (1%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+ K VKA
Sbjct: 28 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKA 87
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+ELRDH D+NIVIM+
Sbjct: 88 QIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLV 147
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNK+DL HLRAV+ EDA+ AE+E F+ETSALE++NVE AF +L IY ++SKKAL
Sbjct: 148 GNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALD 207
Query: 184 AQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
+ ++ P+G TINV VK CCS+
Sbjct: 208 IGDDPAAP--PRGQTINVGGKDDVSAVKKSGCCSS 240
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 171/210 (81%), Gaps = 3/210 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++N+ RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRDHADANIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL HLRAV ++A+ AEK LSF+ETSAL++ NVE AFQ IL +IYHI+S+K + +
Sbjct: 125 KCDLRHLRAVPTDEAKNFAEKNTLSFIETSALDSTNVETAFQNILTEIYHIVSQKQI--K 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA-CC 214
+A ++ + + + +VK K CC
Sbjct: 183 DAPQNSEISSQPIVVGPTVDSDVKKKPQCC 212
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 172/213 (80%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK--ACCSN 216
A + I+V + + +G CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDSQRGGRLQCCQN 217
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 169/208 (81%), Gaps = 4/208 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
+D+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L ++GKTVKAQIWDT
Sbjct: 7 FDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAIDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI+K QT+ NVTRWL+ELRDHAD NIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKHQTYSNVTRWLKELRDHADQNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL--AAQE 186
L HLRAV ++A+ + + GLSF+ETSAL+A NVE AFQTIL DIY I+S K+L +A
Sbjct: 127 LKHLRAVPTDEAKAFSSENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSADP 186
Query: 187 AASSTGLPQGTTINVANLSGNVKGKACC 214
STG T +V + + G CC
Sbjct: 187 IKPSTGDNILVTPSVDPQAQS--GSKCC 212
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 170/211 (80%), Gaps = 1/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL V+GK +KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQI 66
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H D NIV+M+ GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGN 126
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HL AV+ ED + AE+E L F+ETSALEA NVE AF +L IY I+SKK++
Sbjct: 127 KSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGG 186
Query: 186 EAASSTGLP-QGTTINVANLSGNVKGKACCS 215
+ +++ +P +G INV + + +K CCS
Sbjct: 187 DEGAASSVPAKGERINVKDDASALKRVGCCS 217
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/215 (68%), Positives = 170/215 (79%), Gaps = 1/215 (0%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT++L V+ K +K
Sbjct: 4 YRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIK 63
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+N RWL+ELRDH D NIV+M+
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVML 123
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNKSDL HL AV ED + AE+E L F+ETSALEA NVE AF +L IY I+SKKA+
Sbjct: 124 IGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAV 183
Query: 183 -AAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
A + +SS+ G TINV S +K CCSN
Sbjct: 184 EAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 218
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ET+AL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLF++VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMVDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
+ I+V + +KG CC N
Sbjct: 185 PGHDESPGNNVVDISVPPTTDGLKGNKFQCCQN 217
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 170/209 (81%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
E + + + + ++ + + K CC
Sbjct: 183 EGSQNVLGGERKVLEISKSADAEQKKGCC 211
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 171/217 (78%), Gaps = 16/217 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A++ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANLSG-NVKG-------KACC 214
P+G I +N+ +VK K CC
Sbjct: 185 --------PEGDVIRPSNVEPIDVKPTVTADVRKQCC 213
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 172/215 (80%), Gaps = 6/215 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 EAASSTGLPQGTTINVA---NLSGNVKGK-ACCSN 216
+ A+ P ++++ G K CC N
Sbjct: 183 DCAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 170/213 (79%), Gaps = 6/213 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE AFQ IL +IY I+S+K + +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQKQI--R 182
Query: 186 EAASSTGLPQGTTINVANL----SGNVKGKACC 214
A + P G + ++ S + + + CC
Sbjct: 183 NDADNDPSPSGDNVKAISIAPTDSSDTRKRQCC 215
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 169/208 (81%), Gaps = 5/208 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
+DYLFK+VLIGDSGVGKSN+LSRFTRNEF LE+KSTIGVEFATR++ V+GKT+KAQIWDT
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAIT+AYYRGAVGALLVYDI+K T+ NVTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV E+A+ A + GLSF+ETSAL+A NVE AFQTIL DIY I+S K+L +++
Sbjct: 127 LKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL--EQSD 184
Query: 189 SSTGLPQGTTINVA---NLSGNVKGKAC 213
G TI V+ + N GK C
Sbjct: 185 DPIKPTSGDTITVSHSVDTPANAGGKCC 212
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 172/215 (80%), Gaps = 6/215 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-- 182
Query: 186 EAASSTGLPQGTTINVA---NLSGNVKGK-ACCSN 216
+ A+ P ++++ G K CC N
Sbjct: 183 DCAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++Q++GKT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K +F+NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+D HLRAV ED + A + GLSF+ETSALEA NV+ AFQ IL IY I+S K+LA +
Sbjct: 123 KTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLAEE 182
Query: 186 EAASSTGLP--QGTTINVANLSGNVKGKACC 214
A +G I+++ + K+CC
Sbjct: 183 GADVGKKFDPREGNNISLSQEGAKKEDKSCC 213
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/207 (69%), Positives = 169/207 (81%), Gaps = 3/207 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++ V+ KTVKAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI+K T+ NVTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV E+A+ + + LSF+ETSAL+A NVE AFQTIL D+Y I+S K+L ++++
Sbjct: 127 LKHLRAVPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYRIVSTKSL--EQSS 184
Query: 189 SSTGLPQGTTINVA-NLSGNVKGKACC 214
P TI VA + S K +CC
Sbjct: 185 DPIRAPTSDTIPVAIDSSAPTKNGSCC 211
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 169/211 (80%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CC 214
A + I+V + K CC
Sbjct: 185 AAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADS+IVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 170/210 (80%), Gaps = 1/210 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK-ACC 214
A + I+V + K K CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKNKLPCC 214
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 65 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 124
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 125 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 184
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 185 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 244
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 245 AAHDESPGNNVVDISVPPTTDGQKPSKLQCCQN 277
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 168/215 (78%), Gaps = 3/215 (1%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+ + EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QVEGKTVKA
Sbjct: 3 RTEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKA 62
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGAVGALLVYDI K T+++V RWL+ELRDHAD +IVIM+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYEHVERWLKELRDHADHHIVIMLV 122
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNK+DL HLRAV ++A+ AEK L+F+ETSAL++ NVE AFQ IL DIYHI+S+K +A
Sbjct: 123 GNKNDLRHLRAVPTDEAKAFAEKNNLNFIETSALDSTNVESAFQQILTDIYHIVSRKQMA 182
Query: 184 AQEAASSTGLPQGTTINVA---NLSGNVKGKACCS 215
A L I + + K CC+
Sbjct: 183 NDGDADIAALKNENKITIPPNESRKDPPASKKCCN 217
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 169/208 (81%), Gaps = 4/208 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
+DYLFK+VLIGDSGVGKSN+LSRFTRNEF +E+KSTIGVEFATR++ VEGKT+KAQIWDT
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAIT+AYYRGAVGALLVYDI+K T+ NVTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV E+A+ A + GLSF+ETSAL+A NVE AFQTIL DIY I+S K+L +++
Sbjct: 127 LKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL--EQSE 184
Query: 189 SSTGLPQGTTINVANL--SGNVKGKACC 214
G TI V++ +G CC
Sbjct: 185 DPIKPTSGDTIQVSHSVDQNQSQGGKCC 212
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 169/211 (80%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S++ +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQRQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK--ACC 214
A + I+V +G CC
Sbjct: 185 SAHDDSPGNNVVDISVPPTMDGQRGNKLPCC 215
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 SAHGESPGNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 169/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYR ITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSG GKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NV+RWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-AAQEA 187
L HLRAV E+A+ A + LSF+ETSAL+A NVE+AFQ IL +IY I+S KAL ++ +
Sbjct: 127 LRHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDDV 186
Query: 188 ASSTGLPQGTTINV---ANLSGNVKGKACC 214
+G G TI V A+ G K CC
Sbjct: 187 IKPSG---GETITVQPSADDGGQTKKNGCC 213
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 169/211 (80%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CC 214
A + I+V + K CC
Sbjct: 185 AAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/202 (68%), Positives = 168/202 (83%), Gaps = 2/202 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR++ V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ +DA+ AE+E F+ETSALE+LNV+ AF +L IY ++SKK
Sbjct: 123 LVGNKADLRHLRAVSTDDAKGFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSKKT 182
Query: 182 LAAQEAASSTGLPQGTTINVAN 203
L + ++ LP+G TINV +
Sbjct: 183 LEIGDDPAA--LPKGQTINVGS 202
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/215 (64%), Positives = 171/215 (79%), Gaps = 3/215 (1%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
YK + +YDYLFK+VL GDSGVGKSN+LSRFTRN+F +S+STIGVEFATR++QV+ K VK
Sbjct: 4 YKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVK 63
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+N VIM+
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIML 123
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNK+DLNHLRA++ E+ + AE+E F+ETSALEA+NVE AF +L IY ++SKKAL
Sbjct: 124 VGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKAL 183
Query: 183 AAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
A + +T LP+G INV + VK CC+
Sbjct: 184 DAGDDP-TTALPKGQMINVGSRDDVSAVKKSGCCA 217
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 169/209 (80%), Gaps = 6/209 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKT+KAQIWDT
Sbjct: 7 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAIT+AYYRGAVGALLVYDITK ++ NVTRWL+ELRDHAD+NIVIM+ GNKSD
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ + + GLSF+ETSAL+A NVE AFQT L DIY I+S++ L ++ A
Sbjct: 127 LKHLRAVPTDEAKAFSTENGLSFIETSALDATNVESAFQTTLTDIYRIVSRQTL--EQNA 184
Query: 189 SSTGLPQGT--TIN--VANLSGNVKGKAC 213
P G TIN V N + GK C
Sbjct: 185 DPIKPPTGDTRTINPSVDNSASAPSGKCC 213
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 168/211 (79%), Gaps = 3/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI-RD 183
Query: 186 EAASSTGLPQGTTINV--ANLSGNVKGKACC 214
S P I+V N + + K CC
Sbjct: 184 PPEGSVIRPNLENIDVKPTNPTTDSVRKQCC 214
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 169/214 (78%), Gaps = 5/214 (2%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+ D EYDYLFK+VLIGD+GVGKSN+LSRFTRNEF LESKSTIG EFATR++Q EGK +KA
Sbjct: 3 RSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKIIKA 62
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ +FDNV RWL+EL+DHAD+NIVIM+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLV 122
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNKSDL HL+AV +DA AE GLSF+ETSAL+ VE+AF++IL +IY + SKKAL
Sbjct: 123 GNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSILSEIYRLGSKKAL- 181
Query: 184 AQEAASSTGLPQGT---TINVANLSGNVKGKACC 214
++ ++S P T IN G + CC
Sbjct: 182 -EKGSTSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 171/217 (78%), Gaps = 16/217 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLR+V ++A++ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANLSG-NVKG-------KACC 214
P+G I +N+ +VK K CC
Sbjct: 185 --------PEGDVIRPSNVEPIDVKPTVTADVRKQCC 213
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 171/208 (82%), Gaps = 2/208 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + +
Sbjct: 125 DLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDG 184
Query: 188 ASST-GLPQGTTIN-VANLSGNVKGKAC 213
+T G G ++ A+ S GK C
Sbjct: 185 PQATIGAGPGISLTKPADDSAEKSGKCC 212
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 167/209 (79%), Gaps = 3/209 (1%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K+ T+DNVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHADNNIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL--AAQ 185
DL HLRAV EDA+ A + LSF+ETSAL++ NVE AFQTIL +IY I+S KAL Q
Sbjct: 125 DLRHLRAVPTEDAKNFAAENHLSFIETSALDSTNVELAFQTILTEIYRIVSSKALDGGDQ 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
S G Q I + K CC
Sbjct: 185 HQVSQPGSSQPLHI-TPTAENSTKDTKCC 212
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 175/216 (81%), Gaps = 8/216 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE++F+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK-----ACCSN 216
A + P ++++ ++ + G+ CC N
Sbjct: 185 AAHEDS--PGNNVVDIS-VTPTMDGQRSIKLQCCQN 217
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 168/211 (79%), Gaps = 3/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI-RD 183
Query: 186 EAASSTGLPQGTTINV--ANLSGNVKGKACC 214
S P I+V N + + K CC
Sbjct: 184 PPEGSVIRPNLENIDVKPTNPATDSVRKQCC 214
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 167/211 (79%), Gaps = 1/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT+++Q EGKT+KAQI
Sbjct: 5 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K+++F V +WL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV+ E+ + AEK LSF+ETSAL+A NVE+AF +L +IY I+ KKAL +
Sbjct: 125 KSDLKHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALTNE 184
Query: 186 EAAS-STGLPQGTTINVANLSGNVKGKACCS 215
+ S L + + K CCS
Sbjct: 185 KNPSFKPALGESVVVRDPAEDKGTHKKKCCS 215
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 175/216 (81%), Gaps = 8/216 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE++F+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK-----ACCSN 216
A + P ++++ ++ + G+ CC N
Sbjct: 185 AAHEDS--PGNNVVDIS-VTPTMDGQRSVKLQCCQN 217
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/209 (66%), Positives = 171/209 (81%), Gaps = 1/209 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+K+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYD++K QT++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +I+ I+S KAL +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
+ +S+ L + + + K + CC
Sbjct: 183 D-SSANQLGDRKVVEITKTPDSEKKQGCC 210
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 168/209 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
E + + ++ + + K CC
Sbjct: 183 EGSGPVLGNDRKVLEISKSADAEQKKGCC 211
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 169/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRG VGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSSKLQCCQN 217
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/206 (67%), Positives = 165/206 (80%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
+DYLFK+VLIGDSGVGKSN+LSRFTRNEF LE+KSTIGVEFATRT+ V+GKT+KAQIWDT
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAIT+AYYRGAVGALLVYDI K T+ NVTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV E+A+ + + GLSF+ETSAL+A NVE AFQTIL DI+ I+S K+L A
Sbjct: 127 LKHLRAVPTEEAKAFSAENGLSFIETSALDASNVESAFQTILTDIFRIVSNKSLEPSGDA 186
Query: 189 SSTGLPQGTTINVANLSGNVKGKACC 214
T++ + + N + CC
Sbjct: 187 IKPSSGDTLTVSPSVDTSNAQASKCC 212
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 168/211 (79%), Gaps = 3/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI-RD 183
Query: 186 EAASSTGLPQGTTINV--ANLSGNVKGKACC 214
S P I+V N + + K CC
Sbjct: 184 PPEGSVIRPNLENIDVKPTNPTTDSVRKQCC 214
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CC 214
A + I+V + KG CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKGNKLQCC 215
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 169/214 (78%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL V+ K +
Sbjct: 3 GYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
K+QIWDTAGQERYRAITSAYYRGA+GALLVYD+T+ TF+NV RWL+ELR+H DSNIV+M
Sbjct: 63 KSQIWDTAGQERYRAITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV+ ED + EKE L F+ETSALEA NVE AF +L IY+++SKKA
Sbjct: 123 LVGNKSDLRHLVAVSTEDGKSYTEKESLYFIETSALEASNVENAFAEVLTQIYNVVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ E +++ +G I++ N +K CCS
Sbjct: 183 VEGAENGTASVPAKGEKIDLKNDVSALKRVGCCS 216
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 168/213 (78%), Gaps = 3/213 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKTVKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL HLRAV ++A+ AE+ LSF+ETSAL++ NVE AF IL +IY I+S++ L
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQRQLREP 184
Query: 186 EAASSTGLPQGT-TINVANL--SGNVKGKACCS 215
T P TINV + NV+ + C S
Sbjct: 185 AEDEVTIRPNNVETINVKPTVSTENVRRQCCNS 217
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/209 (66%), Positives = 170/209 (81%), Gaps = 1/209 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+K+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYD++K QT++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +I+ I+S KAL +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
+ +S+ L + + + K CC
Sbjct: 183 D-SSANQLGDRKVVEITKTPDSEKKPGCC 210
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 168/218 (77%), Gaps = 17/218 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAIT+AYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ AE+ GLSF+ETSAL++ NV+ AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANLSG-------NVKG--KACC 214
P+G I N+ N G K CC
Sbjct: 185 --------PEGDVIRPHNVEPIDVKPTMNTDGVRKQCC 214
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/206 (68%), Positives = 166/206 (80%), Gaps = 2/206 (0%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YD+LFK+VLIGDSGVGKSN+LSRFTRNEF ++SKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+D+VTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYDSVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV E+A+ + + LSF+ETSAL+A NV+ AFQTIL IY I+S K+L +++A
Sbjct: 127 LKHLRAVPTEEAKAFSTENELSFIETSALDASNVDSAFQTILTGIYRIVSSKSL--EQSA 184
Query: 189 SSTGLPQGTTINVANLSGNVKGKACC 214
P TI VA S CC
Sbjct: 185 DPIRAPTSDTIPVAIDSSAPSQSKCC 210
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 171/213 (80%), Gaps = 6/213 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVA---NLSGNVKGK-ACC 214
A + P ++++ G K CC
Sbjct: 185 AAHDES--PGNNVVDISVPPTTDGQRPNKLQCC 215
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 171/218 (78%), Gaps = 7/218 (3%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA K D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MANK-DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKT 59
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+EL+DHAD NIVI
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKDHADQNIVI 119
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV ++A+ AEK LSF+ETSAL++ NVE AF IL DIYHI+S+K
Sbjct: 120 MLVGNKNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQK 179
Query: 181 ALAAQ----EAASSTGLPQGTTINVANLSGNVKGKACC 214
+ ++ + S +P TI + + N K C
Sbjct: 180 QIRSEGDNDPSPSRDNIP--ITIAPTDPTDNRKKSCAC 215
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 166/209 (79%), Gaps = 1/209 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSG GKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT+DNV RWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALEGE 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
+S G + I++ CC
Sbjct: 183 SGGASVG-ERRQIIDIEKTQDTENKGGCC 210
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 53 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 112
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 113 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 172
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 173 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 232
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + K CC N
Sbjct: 233 SAHDESPGNNVVDISVPPTTDGQKSNKLQCCQN 265
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 140/206 (67%), Positives = 165/206 (80%)
Query: 11 YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAG 70
+ FKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAG
Sbjct: 140 HFFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 199
Query: 71 QERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLN 130
QERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL
Sbjct: 200 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 259
Query: 131 HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASS 190
HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 260 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDM 319
Query: 191 TGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 320 SPSNNVVPIHVPPTTENKPKVQCCQN 345
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 174/219 (79%), Gaps = 7/219 (3%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+++ TF+NV RWL+ELRDH D+NIV+M
Sbjct: 63 KAQVWDTAGQERYRAITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRDHTDTNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQ--ILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
+ GNK+DL HLRAV+ ED+ +L E+ F+ETSALE+LNVE AF +L IY ++SK
Sbjct: 123 LVGNKADLRHLRAVSTEDSSGFLLNERTHF-FMETSALESLNVENAFTEVLTQIYRVVSK 181
Query: 180 KALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
KAL + T LP+G TINV + VK CCS+
Sbjct: 182 KALEIGD--DPTALPKGQTINVGSRDDVSPVKKSGCCSS 218
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/209 (68%), Positives = 173/209 (82%), Gaps = 4/209 (1%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + +
Sbjct: 125 DLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDG 184
Query: 188 ASSTGLPQGTTINV---ANLSGNVKGKAC 213
A ++ + G +I + A+ S GK C
Sbjct: 185 AQAS-IGTGPSIALSKPADDSAEKSGKCC 212
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF++IL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRIVSQKQISDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK--ACC 214
A + I+V +G CC
Sbjct: 185 SAHEDSPGNNVVDISVPPTMDGQRGNKLPCC 215
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 170/208 (81%), Gaps = 2/208 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT+DNV RWL+ELRDHADSNIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + ++
Sbjct: 125 DLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDS 184
Query: 188 ASSTGLPQGTTINVANLSGNVKGK-ACC 214
+ GL + N S + + K CC
Sbjct: 185 GQA-GLGDRRPVVDINPSQDPETKQGCC 211
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 172/217 (79%), Gaps = 2/217 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
YK EYDYLFK+VLIGDSGVGKSN+LSRFTRN+F LESKSTIGVEFAT++L+++GK +
Sbjct: 3 GYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+N RWL+ELRDH D N+V+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK DL HL V ED + AE+E L F+ETSAL+A NVE AF +L IY I+SK++
Sbjct: 123 LIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKRS 182
Query: 182 LAAQEAAS-STGLP-QGTTINVANLSGNVKGKACCSN 216
+ A + S ST LP +G TI+V + S +K CCS+
Sbjct: 183 VEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 145/230 (63%), Positives = 170/230 (73%), Gaps = 19/230 (8%)
Query: 6 DHEYDYLFK-------------------IVLIGDSGVGKSNILSRFTRNEFCLESKSTIG 46
D EYDYLFK +VLIGDSGVGKSN+LSRFTRNEF LESKSTIG
Sbjct: 6 DDEYDYLFKELQGCWVAIPIIPSLQIIKMVLIGDSGVGKSNLLSRFTRNEFNLESKSTIG 65
Query: 47 VEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRW 106
VEFATR++QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RW
Sbjct: 66 VEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERW 125
Query: 107 LRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAF 166
L+ELRDHADSNIVIM+ GNKSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AF
Sbjct: 126 LKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF 185
Query: 167 QTILLDIYHIISKKALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
QTIL +IY I+S+K ++ + + I+V + N CC N
Sbjct: 186 QTILTEIYRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKMQCCQN 235
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 172/212 (81%), Gaps = 5/212 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K T++NVTRWL+ELRDHAD+NIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + GLSF+ETSAL+A NVE AFQ L +IY I+S KAL
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENGLSFIETSALDASNVELAFQNELTEIYRIVSSKAL--D 180
Query: 186 EAASSTGLPQGTTINVAN--LSGNVKGKA-CC 214
+ + G QG+ I +++ G+ K CC
Sbjct: 181 QGEQTAGPSQGSAIPLSSSTPPGDATKKGQCC 212
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 172/214 (80%), Gaps = 2/214 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK--ACCSNQ 217
+ I++ + + +G CC +Q
Sbjct: 185 SGHDESPGNNVVDISLPPTTDSQRGGKLPCCQSQ 218
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YD+LFK+VLIGDSGVGKSN+LSRFTRNEF +ESKSTIGVEFATR++ V+ KT+KAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKTIKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI+K+Q++ +V RWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV E+A+ A + LSF+ETSA++A NVE AFQ IL DIY I+S KAL + +
Sbjct: 127 LRHLRAVPTEEAKAFAAENNLSFIETSAMDASNVESAFQNILTDIYRIVSSKAL--ESSG 184
Query: 189 SSTGLPQGTTINVANLS-----GNVKGKAC 213
S G G+TI V + N GK C
Sbjct: 185 DSVGPTSGSTITVTPTADDGAKSNAGGKCC 214
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 168/210 (80%), Gaps = 7/210 (3%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSG GKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NV+RWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-AAQEA 187
L HLRAV ++A+ A + LSF+ETSAL+A NVE+AFQ IL +IY I+S KAL ++ +
Sbjct: 127 LRHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDDV 186
Query: 188 ASSTGLPQGTTINV---ANLSGNVKGKACC 214
+G G TI V A+ G K CC
Sbjct: 187 IKPSG---GETITVQPSADDGGQTKKNGCC 213
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 135/177 (76%), Positives = 158/177 (89%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQI
Sbjct: 1 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 60
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 61 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 120
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
KSDL HLR+V ++A++ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 121 KSDLRHLRSVPTDEARLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 177
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 172/216 (79%), Gaps = 3/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ + +YDYLFK+VL GDSGVGKSN+LSRFTRN+F +S++TIGVEFATR++Q + K V
Sbjct: 3 AYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRA++ E+A+ AE+E F+ETSALEA+NV+ AF +L IY ++SKKA
Sbjct: 123 LVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L A + +T LP+G INV + VK CCS
Sbjct: 183 LEAGD-DPTTALPKGQMINVGSRDDISAVKKPGCCS 217
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/215 (67%), Positives = 169/215 (78%), Gaps = 1/215 (0%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT++L V+ K +K
Sbjct: 4 YRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIK 63
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+N RWL+ELRDH D NIV+M+
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVML 123
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNKSDL HL AV ED + AE+E L F+ETSALEA NVE AF +L IY I+SKKA+
Sbjct: 124 IGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAV 183
Query: 183 -AAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
A + +SS+ G TINV +K CCSN
Sbjct: 184 EAGEGGSSSSVPSVGQTINVKEDFSVLKRFGCCSN 218
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 172/212 (81%), Gaps = 3/212 (1%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
VD EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++++ K VKAQ
Sbjct: 4 VDEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQ 63
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF+NV RWL+ELRDH D+ +VIM+ G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVG 123
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NK+DL HL+AV+ E+A AEKE + F+ETSALE+LNV+ AF +L IY+++SKK L
Sbjct: 124 NKADLKHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKKTLEK 183
Query: 185 QEAASSTGLPQGTTINVA-NLSGNVKGKACCS 215
+ ++S +P+G TIN+ + +VK CCS
Sbjct: 184 ENGSAS--VPKGETINIGKDDVSDVKKSGCCS 213
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/209 (66%), Positives = 168/209 (80%), Gaps = 1/209 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+K+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A LSF+ETSAL+A NVE AFQ IL +I+ I+S KAL +
Sbjct: 123 KSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDSG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
++A + L + + + CC
Sbjct: 183 DSAQNP-LSDRKVVEITKTQDPESKQGCC 210
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 171/216 (79%), Gaps = 3/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ + +YDYLFK+VL GDSGVGKSN+LSRFTRN+F +S++TIGVEFATR++Q + K V
Sbjct: 3 AYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRA++ E+A+ AE+E F+ETSALEA+NV+ AF +L IY ++SKKA
Sbjct: 123 LVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKA 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L A + +T LP+G INV VK CCS
Sbjct: 183 LEAGD-DPTTALPKGQMINVGGRDDISAVKKPGCCS 217
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 170/217 (78%), Gaps = 16/217 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LES STIGVEFATR+++V+GKT+KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLR+V ++A++ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANLSG-NVKG-------KACC 214
P+G I +N+ +VK K CC
Sbjct: 185 --------PEGDVIRPSNVEPIDVKPTVTADVRKQCC 213
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/217 (64%), Positives = 170/217 (78%), Gaps = 4/217 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LE+KSTIGVEFATR+++V+ K V
Sbjct: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+ELR H D NIVIM
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIVIM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRAV+ EDAQ AE+E F+ETSALE+ NVE +F +L Y ++S+K
Sbjct: 123 LVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKI 182
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
L + T LP+G TI++ + VK CCS+
Sbjct: 183 LDIGD--DPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 165/207 (79%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT+DNV RWL+ELRDHADSNIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL +A
Sbjct: 125 DLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGDA 184
Query: 188 ASSTGLPQGTTINVANLSGNVKGKACC 214
+ + + + + CC
Sbjct: 185 GQTVLGDRRDMVRIDESEDPKTKQGCC 211
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 170/208 (81%), Gaps = 2/208 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L++KSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT+DNV RWL+ELRDHADSNIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + ++
Sbjct: 125 DLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDS 184
Query: 188 ASSTGLPQGTTINVANLSGNVKGK-ACC 214
+ GL + N S + + K CC
Sbjct: 185 GQA-GLGDRRPVVDINPSQDPETKQGCC 211
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 168/216 (77%), Gaps = 3/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
+Y+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFAT+T +VEGK V
Sbjct: 3 SYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALL+YD+T+ TF+N RWLRELR H D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK DL HL AV E+A+ AE+E L F+ETSAL+A NVE AF +L I+ I+SK++
Sbjct: 123 LIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVSKRS 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ ST LP +G TINV +K CCSN
Sbjct: 183 VDG--GGDSTELPGKGETINVKEDGSVLKRMGCCSN 216
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 169/211 (80%), Gaps = 7/211 (3%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T++NVTRWL+ELRDHAD NIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHADQNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-AAQEA 187
L HLRAV ++A+ + + LSF+ETSAL+A NVE AFQ IL DIY I+S KAL ++ +
Sbjct: 127 LKHLRAVPTDEAKAFSTENNLSFIETSALDASNVESAFQNILTDIYRIVSSKALDSSGDV 186
Query: 188 ASSTGLPQGTTINVANLS---GNVKGKACCS 215
G G TI VA + G +G CC+
Sbjct: 187 IKPAG---GETILVAPTADDGGAKQGSKCCA 214
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 169/210 (80%), Gaps = 1/210 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GK +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +I+ I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK-ACC 214
A + I+V + K K CC
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKNKLPCC 214
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 168/208 (80%), Gaps = 4/208 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++V+ K VKAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 60
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIV+M+ GNK+DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 120
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
HLRAV+ ED+ AE+E F+ETSALE+LNVE AF +L IY ++SKKAL + +
Sbjct: 121 RHLRAVSTEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDPA 180
Query: 190 STGLPQGTTINVANLS--GNVKGKACCS 215
+ LP+G TINV + VK CCS
Sbjct: 181 A--LPKGQTINVGSRDDVSAVKKGGCCS 206
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 169/210 (80%), Gaps = 7/210 (3%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSG GKSN+LSRFTRNEF L+S+STIGVEFATR++ V+GKT+KAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NV+RWL+ELRDHADSNIV+M+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-AAQEA 187
L HLRAV E+A+ A + LSF+ETSAL+A NVE+AFQ IL +IYHI+S KAL ++ +
Sbjct: 127 LRHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSSDDV 186
Query: 188 ASSTGLPQGTTINV---ANLSGNVKGKACC 214
+G G TI+V + G K CC
Sbjct: 187 IKPSG---GETISVQPSTDDGGQTKKGGCC 213
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 169/217 (77%), Gaps = 5/217 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + DYLFK+VLIGD+GVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q EGK
Sbjct: 1 MPFVSVRPVDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKI 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ +FDNV RWL+EL+DHAD+NIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HL+AV +DA AE GLSF+ETSAL+ NVE+AF++IL +IY + SKK
Sbjct: 121 MLVGNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKK 180
Query: 181 ALAAQEAASSTGLPQGT---TINVANLSGNVKGKACC 214
AL ++ ++S P T IN G + CC
Sbjct: 181 AL--EKGSTSNFAPNATQTIVINPPADEGKTEKAKCC 215
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/210 (66%), Positives = 165/210 (78%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
H L ++VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIW
Sbjct: 48 HPLQSLIEVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 107
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNK
Sbjct: 108 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 167
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 168 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRR 227
Query: 187 AASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 228 ENDMSPSNNVVPIHVPPTTENKPKVQCCQN 257
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 171/217 (78%), Gaps = 5/217 (2%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ + EYDYLFK+VLIGDSGVGKSN+LSRF R+EF LE++STIGVEFAT+T+QV+ K VK
Sbjct: 5 YRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVK 64
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGAL+VYD+++R TFDN RWLRELRDH D+NIV+M+
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVVML 124
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNK+DL HLRAV+ EDA AE+ G +ETSAL+A NVE+AF +L IYH++S+ AL
Sbjct: 125 VGNKADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNAL 184
Query: 183 AAQEAASSTGLPQGTTINVA---NLSGNVKGKACCSN 216
+ ++ P+G TI+V+ + V CCS+
Sbjct: 185 DIGDDPAAP--PRGKTIDVSAAKDEVSPVNAGGCCSS 219
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 167/218 (76%), Gaps = 17/218 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AE+ LSF+ETSAL++ NVE AFQ IL +IY I+S K +
Sbjct: 125 KSDLRHLRAVPTDEAKNFAERNALSFIETSALDSTNVETAFQNILTEIYRIVSXKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANLSG-NVKG--------KACC 214
P+G TI N+ +VK K CC
Sbjct: 185 --------PEGETIRPQNVEAIDVKPTVNTESVRKQCC 214
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 170/213 (79%), Gaps = 6/213 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT ++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVA---NLSGNVKGK-ACC 214
A + P ++++ G K CC
Sbjct: 185 AAHDES--PGNNVVDISVPPTTDGQRPNKLQCC 215
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/188 (75%), Positives = 157/188 (83%), Gaps = 3/188 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++ V+GKTVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T+ NVTRWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHSTYTNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ + GLSF+ETSAL+ NVE AFQ IL DIY I+S KAL EAA
Sbjct: 127 LKHLRAVPTDEAKAFSADNGLSFIETSALDGGNVEAAFQNILTDIYRIVSNKAL---EAA 183
Query: 189 SSTGLPQG 196
P G
Sbjct: 184 PDVIKPSG 191
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 167/211 (79%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++Q++ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K +F+NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+D HLRAV ED + A + GLSF+ETSALEA NV+ AFQ IL IY I+S K+LA +
Sbjct: 123 KTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLAEE 182
Query: 186 EAASSTGLP--QGTTINVANLSGNVKGKACC 214
A +G I ++ + K CC
Sbjct: 183 GADVGKKFDPREGNNITLSQEGRKEESKTCC 213
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 171/211 (81%), Gaps = 5/211 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGK+N+LSRFTRNEF LESKSTIGVEFATR++QV+ K +KAQI
Sbjct: 4 DEEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K T+++V RWL+ELRDHADSNIVIM+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ A GLSF+ETSAL+A NV+++FQ IL +IY I+S KAL
Sbjct: 124 KSDLRHLRAVPTDEAKQFASDNGLSFIETSALDATNVDQSFQQILTEIYRIVSNKAL--- 180
Query: 186 EAASSTGLP-QGTTINVANLSG-NVKGKACC 214
E++++T P G TI V+ K CC
Sbjct: 181 ESSNNTIKPTSGQTILVSQTPDEQTKQGGCC 211
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 171/212 (80%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K TF+NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV EDA+ AE+ LSF+ETSAL+A NVE AFQ IL +IY I+S K
Sbjct: 123 KSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNG 182
Query: 186 EAASSTGLPQ--GTTINVANLSGNVKGKA-CC 214
+ S+ G G +I+++ + + + K+ CC
Sbjct: 183 PSGSTEGHQNLSGQSISLSQTANDPQAKSGCC 214
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 170/217 (78%), Gaps = 16/217 (7%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELR HAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRGHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLR+V ++A++ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 186 EAASSTGLPQGTTINVANLSG-NVKG-------KACC 214
P+G I +N+ +VK K CC
Sbjct: 185 --------PEGDVIRPSNVEPIDVKPTVTADVRKQCC 213
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 138/208 (66%), Positives = 167/208 (80%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
+ ++F +VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDT
Sbjct: 76 FCFVFSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 135
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 136 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 195
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ +
Sbjct: 196 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREN 255
Query: 189 SSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V+ + N CC N
Sbjct: 256 DMSPSNNVVPIHVSPTTENKPKVQCCQN 283
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK--ACC 214
+ I++ + + +G CC
Sbjct: 185 SGHEESPGNNVVDISLPPTTDSQRGGKLPCC 215
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 172/218 (78%), Gaps = 6/218 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + +YDYLFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT+++ EGKT
Sbjct: 165 MASPKEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKT 224
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK +F+NV RWL+ELR+HAD+N VI
Sbjct: 225 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVI 284
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV E+A AEK L+F+ETSALEA+ V+ AFQ IL +IY ++S+K
Sbjct: 285 MLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRK 344
Query: 181 ALAAQEAASSTGLPQGTTINVAN--LSGNVKGK--ACC 214
+ A+E + +P G I + + VK K +CC
Sbjct: 345 TMQAEE--NQISIPSGDNIVITSDKTEEGVKKKKSSCC 380
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 171/212 (80%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K TF+NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV EDA+ AE+ LSF+ETSAL+A NVE AFQ IL +IY I+S K
Sbjct: 123 KSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNG 182
Query: 186 EAASSTGLPQ--GTTINVANLSGNVKGKA-CC 214
+ S+ G G +I+++ + + + K+ CC
Sbjct: 183 PSGSNEGHQNLSGQSISLSQTANDPQAKSGCC 214
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 167/212 (78%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QVEGKTVKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA- 184
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE AF IL +IY +S K +
Sbjct: 125 KSDLRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHVGGD 184
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
AA ST P I ++ + K CCS+
Sbjct: 185 NRAAIST--PGSNGIVISPTAEPQTKKQCCSS 214
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 172/218 (78%), Gaps = 6/218 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + +YDYLFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT+++ EGKT
Sbjct: 1 MASPKEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK +F+NV RWL+ELR+HAD+N VI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLRAV E+A AEK L+F+ETSALEA+ V+ AFQ IL +IY ++S+K
Sbjct: 121 MLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRK 180
Query: 181 ALAAQEAASSTGLPQGTTINVAN--LSGNVKGK--ACC 214
+ A+E + +P G I + + VK K +CC
Sbjct: 181 TMQAEE--NQISIPSGDNIVITSDKTEEGVKKKKSSCC 216
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 166/216 (76%), Gaps = 3/216 (1%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFAT+T +VEGK V
Sbjct: 3 GYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALL+YD+T+ TF+N RWLRELR H D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK DL HL AV E+A+ AE+E L F+ETSAL+A NVE AF +L I+ I+SK++
Sbjct: 123 LIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRS 182
Query: 182 LAAQEAASSTGLP-QGTTINVANLSGNVKGKACCSN 216
+ S LP +G TINV +K CCSN
Sbjct: 183 VDG--GGESADLPGKGETINVKEDGSVLKRMGCCSN 216
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 139/207 (67%), Positives = 163/207 (78%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 120
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
H RAV ++A+ AEK GLSF+ET AL++ NVE AFQTIL +IY I+ +K ++ +
Sbjct: 121 RHFRAVPTDEARAFAEKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQMSDRREND 180
Query: 190 STGLPQGTTINVANLSGNVKGKACCSN 216
I+V + N CC N
Sbjct: 181 MFPSNNVVPIHVPPTTENKPKVQCCQN 207
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 167/217 (76%), Gaps = 1/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA K D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT
Sbjct: 1 MANK-DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKT 59
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAV ALLVYDI K T++NV RWL+EL+DHAD NIVI
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGAVXALLVYDIAKHLTYENVERWLKELKDHADQNIVI 119
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV ++A+ AEK LSF+ETSAL++ NVE AF IL DIYHI+S+K
Sbjct: 120 MLVGNKNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQK 179
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSNQ 217
+ ++ + I +A K C+ Q
Sbjct: 180 QIRSEGDNDPSPSRDNIPITIAPTDPTDSRKKSCACQ 216
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 136/194 (70%), Positives = 166/194 (85%), Gaps = 2/194 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQI
Sbjct: 4 EEEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K +++NV+RWL+ELRDHADSNIVIM+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A AE+ LSF+ETSAL++ NVE+AF+ IL IY ++S++++ A
Sbjct: 124 KSDLKHLRAVPKEEATKFAEENSLSFIETSALDSTNVEEAFKNILTSIYRLVSQRSIKAG 183
Query: 186 EAASSTGLPQGTTI 199
E+ +T P T +
Sbjct: 184 ESDKTT--PSDTIV 195
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 166/212 (78%), Gaps = 6/212 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLR+V ++A+ AE+ LSF+ETSAL+ NVE AF IL +IY I+S++ +
Sbjct: 125 KSDLRHLRSVPTDEARAFAERHSLSFIETSALDCTNVETAFHNILTEIYRIVSQRPMHDS 184
Query: 186 EAASSTGLPQGTT--INVANLSGNVKGKA-CC 214
S P G + I ++ N K+ CC
Sbjct: 185 PDEDS---PPGNSGPIQISPTEPNAGSKSNCC 213
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 172/214 (80%), Gaps = 8/214 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AE LSF+ETSAL++ NVE+AF+ IL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK-----ACC 214
A + P ++++ L +G+ CC
Sbjct: 185 SAHDES--PGNNVVDIS-LPPTTEGQRGNKLPCC 215
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 169/208 (81%), Gaps = 4/208 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFKIVLIGDSGVGKSN+LSRFTRNEF ++KSTIGVEFATR++ VEGK +KAQIWDT
Sbjct: 7 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAIT+AYYRGAVGALLVYDI+KR +++NV RWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ A + GLSF+ETSAL+A NV+ AF+T L DIY I+S + L + +A
Sbjct: 127 LKHLRAVPTDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTL--ESSA 184
Query: 189 SSTGLPQGTTINV-ANLSGNVK-GKACC 214
+ P G T++V +L N K CC
Sbjct: 185 NPIEAPSGNTVSVGPSLDSNAKQSNGCC 212
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/217 (62%), Positives = 170/217 (78%), Gaps = 5/217 (2%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ + EYDYLFK+VLIGDSGVGKSN+LSRF R+EF LE++STIGVEFAT+T+QV+ K VK
Sbjct: 5 YRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVK 64
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGAL+VYD+++R TFDN RWLRE RDH D+NIV+M+
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVVML 124
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNK+DL HLRAV+ EDA AE+ G +ETSAL+A NVE+AF +L IYH++S+ AL
Sbjct: 125 VGNKADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNAL 184
Query: 183 AAQEAASSTGLPQGTTINVA---NLSGNVKGKACCSN 216
+ ++ P+G TI+V+ + V CCS+
Sbjct: 185 DIGDDPAAP--PRGKTIDVSAAKDEVSPVNAGGCCSS 219
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 138/204 (67%), Positives = 163/204 (79%)
Query: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
F +VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQE
Sbjct: 1 FSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 60
Query: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHL 132
RYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HL
Sbjct: 61 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 120
Query: 133 RAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTG 192
RAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ + +
Sbjct: 121 RAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSP 180
Query: 193 LPQGTTINVANLSGNVKGKACCSN 216
I+V + N CC N
Sbjct: 181 SNNVVPIHVPPTTENKPKVQCCQN 204
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 171/214 (79%), Gaps = 3/214 (1%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
K + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT++V+ T+KA
Sbjct: 3 KDNDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTIKA 62
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGAVGALLVYDITK +++++V +WL+ELRDHAD+NIVIM+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYEDVEKWLKELRDHADANIVIMLI 122
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNK DL HLR V EDA++ A EGLSF ETSALE+ NVE AF IL +++ I+SKK+
Sbjct: 123 GNKCDLKHLRCVQTEDARLFAANEGLSFTETSALESTNVELAFHQILTEVFQIVSKKS-Q 181
Query: 184 AQEAASSTGLPQGTTINVANLSGNVKGKA--CCS 215
+ E+ + +TI V ++ VK CCS
Sbjct: 182 SNESNDQSQRHGSSTIEVNAINDGVKKSKSQCCS 215
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 167/209 (79%), Gaps = 2/209 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
E L + I+ + K + CC
Sbjct: 183 EGGQQV-LDRRPVIDPSKQDSEQK-QGCC 209
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 288 bits (738), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 137/216 (63%), Positives = 168/216 (77%), Gaps = 5/216 (2%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ + EYDYLFK+VLIGDSGVGKSN+LSRF R+EF LE++STIGVEFAT+T+QV+ K VK
Sbjct: 5 YRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVK 64
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+R TFDN RWLRELRDH D+NIV+M+
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVVML 124
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNK+DL HLRAV EDA AE+ G +ETSAL+A NV++AF +L IYH++S+ AL
Sbjct: 125 VGNKADLRHLRAVTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQIYHVVSRNAL 184
Query: 183 AAQEAASSTGLPQGTTINVA---NLSGNVKGKACCS 215
E ++ P+G TI+V + V CCS
Sbjct: 185 DIGEDPAAP--PRGKTIDVGAAKDEVSPVNTGGCCS 218
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 166/214 (77%), Gaps = 5/214 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFKIVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KTVKAQI
Sbjct: 5 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++N WL+EL+DHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAECWLKELQDHADANIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSF+E SAL++ NVE AF IL +IY I+S++ LA
Sbjct: 125 KSDLRHLRAVPTDEAKSFAEKNGLSFIEASALDSTNVEAAFHNILTEIYRIVSQRQLAGG 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKG---KACCSN 216
+ S GTTI + +G CC N
Sbjct: 185 QPESE--FSHGTTIEPIKVLPTQQGARETPCCQN 216
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 166/209 (79%), Gaps = 2/209 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNG 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
E L + I+ + K CC
Sbjct: 183 EGGQQV-LDRRPVIDPSKQDSEQK-PGCC 209
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/202 (67%), Positives = 162/202 (80%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERY
Sbjct: 56 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 115
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 116 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 175
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ + +
Sbjct: 176 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 235
Query: 195 QGTTINVANLSGNVKGKACCSN 216
I+V + N CC N
Sbjct: 236 NVVPIHVPPTTENKPKMQCCQN 257
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/169 (80%), Positives = 153/169 (90%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 82
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 83 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 142
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY
Sbjct: 143 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum CS3096]
Length = 212
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 172/209 (82%), Gaps = 3/209 (1%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD +VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDREPTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + ++
Sbjct: 125 DLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDS 184
Query: 188 ASSTGLPQGTTINVANLSGN--VKGKACC 214
A +T + GT I+++ + + KG CC
Sbjct: 185 AQAT-IGAGTNISLSKPADDDAAKGGKCC 212
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/221 (65%), Positives = 170/221 (76%), Gaps = 10/221 (4%)
Query: 6 DHEYDYLFK--------IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE 57
D EYDYLFK +VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+
Sbjct: 5 DDEYDYLFKGTAGEAQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 64
Query: 58 GKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSN 117
GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSN
Sbjct: 65 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN 124
Query: 118 IVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHII 177
IVIM+ GNKSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+
Sbjct: 125 IVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIV 184
Query: 178 SKKALAAQEAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
S+K +A + A + I+V + K CC N
Sbjct: 185 SQKQIADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 225
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/215 (67%), Positives = 172/215 (80%), Gaps = 7/215 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++VEGKTVKAQI
Sbjct: 4 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++N RWL+EL+DHADSNIVIM+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK GLSFLETSAL++ NVE AF TIL IY+I+S++ ++ +
Sbjct: 124 KSDLRHLRAVPIDEARAFAEKYGLSFLETSALDSSNVELAFHTILTAIYNIVSQRQMSGR 183
Query: 186 E----AASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ +S +P T+ N KG C SN
Sbjct: 184 SDSDFSPASNVVP--ITVEPTQTLSN-KGVCCQSN 215
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/222 (63%), Positives = 170/222 (76%), Gaps = 13/222 (5%)
Query: 6 DHEYDYLFK------------IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT 53
+ EYD+LFK +VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR+
Sbjct: 3 NDEYDFLFKALADSWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRS 62
Query: 54 LQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDH 113
+Q++GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K +F+NV+RWL+ELRDH
Sbjct: 63 IQIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELRDH 122
Query: 114 ADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDI 173
ADSNIVIM+ GNK+D HLRAV+ ED + A + GLSF+ETSALEA NV+ AFQ IL I
Sbjct: 123 ADSNIVIMLVGNKTDKRHLRAVSTEDGKAFAAEHGLSFIETSALEATNVDLAFQEILTSI 182
Query: 174 YHIISKKALAAQEAASSTGLP-QGTTINVANLSGNVKGKACC 214
Y I+S K+LA + S P QG I+++ + K CC
Sbjct: 183 YQIVSSKSLAEEGDVSKKFDPSQGNNISLSQEKSQEEQKGCC 224
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/223 (64%), Positives = 169/223 (75%), Gaps = 15/223 (6%)
Query: 6 DHEYDYLFK--------------IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFAT 51
+ EYD+LFK +VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFAT
Sbjct: 3 NDEYDFLFKGNVATFPAQSPQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFAT 62
Query: 52 RTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELR 111
R++QV+ KT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K QT+DNV RWL+ELR
Sbjct: 63 RSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELR 122
Query: 112 DHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILL 171
DHADSNIVIM+ GNKSDL HLRAV ++A+ A + LSF+ETSAL+A NVE AFQ IL
Sbjct: 123 DHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILT 182
Query: 172 DIYHIISKKALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
+IY I+S KAL ++ + L G TI V+ + CC
Sbjct: 183 EIYRIVSSKALDNGDSGQAP-LSSGRTIEVSKAPDTESKQGCC 224
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/194 (70%), Positives = 164/194 (84%), Gaps = 2/194 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDT
Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 61
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYR ITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 62 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 121
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A + A
Sbjct: 122 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAH 181
Query: 189 SSTGLPQGTTINVA 202
+ P ++++
Sbjct: 182 DES--PGNNVVDIS 193
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 163/209 (77%), Gaps = 4/209 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ VEGKTVKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+I AE+ LSF+ETSAL++ NVE AF IL +IY +S K +
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTD 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
G GT I + + + K CC
Sbjct: 185 RQGYGGG--SGTII--PSPASDPPKKQCC 209
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/216 (64%), Positives = 170/216 (78%), Gaps = 4/216 (1%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT-LQVEGKTV 61
YK + +YDYLFK+VL GDSGVGKSN+LSRFTRN+F +S+STIGVEFATR +QV+ K V
Sbjct: 4 YKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDDKIV 63
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+N VIM
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIM 123
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DLNHLRA++ E+ + AE+E F+ETSALEA+NVE AF +L IY ++SKKA
Sbjct: 124 LVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKA 183
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L A + +T LP+G INV + VK CC+
Sbjct: 184 LDAGDDP-TTALPKGQMINVGSRDDVSAVKKSGCCA 218
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 162/203 (79%)
Query: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQER
Sbjct: 173 PVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 232
Query: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
YRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLR
Sbjct: 233 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 292
Query: 134 AVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGL 193
AV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ + +
Sbjct: 293 AVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPS 352
Query: 194 PQGTTINVANLSGNVKGKACCSN 216
I+V + N CC N
Sbjct: 353 NNVVPIHVPPTTENKPKVQCCQN 375
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 163/209 (77%), Gaps = 4/209 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ VEGKTVKAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+I AE+ LSF+ETSAL++ NVE AF IL +IY +S K +
Sbjct: 124 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTD 183
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
G GT I + + + K CC
Sbjct: 184 RQGYGGG--SGTII--PSPASDPPKKQCC 208
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 166/213 (77%), Gaps = 3/213 (1%)
Query: 6 DHE-YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV--EGKTVK 62
DH+ YDYLFK+VLIGDSGVGKSN+LSRFTRNEFC ESKSTIGVEFATR ++V EGKTVK
Sbjct: 4 DHDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEVCLEGKTVK 63
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYDITK +++DNV +WL+ELRDHADSNIVI +
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYDNVQKWLKELRDHADSNIVITL 123
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNK+DL HLR+V AE A + EGLSF+ETSA E+ NV+ AF+ L D+YHIISKK+
Sbjct: 124 VGNKTDLKHLRSVQAESAAEFSSIEGLSFVETSACESTNVDVAFKKNLTDVYHIISKKSC 183
Query: 183 AAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
++ E G + + S CC+
Sbjct: 184 SSAEVDDKNGGAGIIEVKAISESSKKNPSKCCN 216
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 175/217 (80%), Gaps = 4/217 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA K D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT+++Q EGKT
Sbjct: 1 MAGKED-EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKT 59
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K TF+NV RWL+ELRDHA++NIV+
Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVV 119
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR V E+A A+K L+FLETSAL+A V+ AFQ IL +IY ++S+K
Sbjct: 120 MLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRK 179
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNV--KGKACCS 215
+AA A+ L +G TI +++ + + K+ C+
Sbjct: 180 TIAAN-TATGPDLSRGETIALSSARDDASNRSKSSCA 215
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/202 (67%), Positives = 162/202 (80%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ + +
Sbjct: 121 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 180
Query: 195 QGTTINVANLSGNVKGKACCSN 216
I+V + N CC N
Sbjct: 181 NVVPIHVPPTTENKPKMQCCQN 202
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/202 (67%), Positives = 162/202 (80%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERY
Sbjct: 15 LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 74
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 75 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 134
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ + +
Sbjct: 135 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 194
Query: 195 QGTTINVANLSGNVKGKACCSN 216
I+V + N CC N
Sbjct: 195 NVVPIHVPPTTENKPKMQCCQN 216
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 167/211 (79%), Gaps = 4/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRN+F LESKSTIGVEFATR+++ + KT+KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIKCDSKTIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K T++NV RWL ELRDHADSNIVIM+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKAVTYENVERWLNELRDHADSNIVIMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS--KKALA 183
KSDL HLRAV E A LAEK GLSF+ETSAL++ NVE AFQ IL +I+HI++ K+
Sbjct: 124 KSDLRHLRAVPTEQAAALAEKHGLSFIETSALDSTNVELAFQKILTEIFHIVNGGKQLET 183
Query: 184 AQEAASSTGLPQGTTINVANLSGNVKGKACC 214
+++ S G + + V K ACC
Sbjct: 184 KKDSQSVDG--ETEVVQVGGDPAPKKAGACC 212
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 170/211 (80%), Gaps = 3/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++++ K VKAQI
Sbjct: 5 DEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYD T+ TF+NV RWL+ELRDH D+ +VIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL HL AV+ E+A AEKE + F+ETSALE++NV+ AF +L IY+++SK+AL +
Sbjct: 125 KTDLRHLCAVSTEEATAFAEKENIYFMETSALESMNVDSAFVEVLTQIYNVVSKRALEKE 184
Query: 186 EAASSTGLPQGTTINVA-NLSGNVKGKACCS 215
++S +P+G TIN+ + VK CCS
Sbjct: 185 NGSAS--VPKGETINIGRDDVSEVKKSTCCS 213
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ VEGKTVKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+I AE+ LSF+ETSAL++ NVE AF IL +IY +S K + +
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGSD 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
G GT I K CC++
Sbjct: 185 RQGYGGG--SGTIIPAP--PTEPPKKQCCNS 211
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Monodelphis
domestica]
Length = 205
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/202 (67%), Positives = 162/202 (80%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERY
Sbjct: 3 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 62
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 63 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 122
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I+S+K ++ + +
Sbjct: 123 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 182
Query: 195 QGTTINVANLSGNVKGKACCSN 216
I+V + N CC N
Sbjct: 183 NVVPIHVPPTTENKPKVQCCQN 204
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 164/209 (78%), Gaps = 1/209 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKS++LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K +++NV RWLRELRDHAD NI+IM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLR++ E+A+ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 125 KSDLRHLRSIPTEEAKAFAERNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQKQM-RD 183
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
P +V + + CC
Sbjct: 184 PPEGDVIRPDAEPADVRAAGADAVRRNCC 212
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 167/212 (78%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGKS +L+RF+RNEF +ESK+TIGVEF TRTL+++ KT+KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDHKTIKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD+V RWL ELR HAD NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL LRAV EDA+ A++E L F+ETSAL++ NVE +F T+L +IY I+SKK L A
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188
Query: 186 EAASSTG---LPQGTTINVANLSGNVKGKACC 214
E S G L QGT I VA KGK CC
Sbjct: 189 EEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 167/212 (78%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGKS +L+RF+RNEF +ESK+TIGVEF TRTL+++ KT+KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD+V RWL ELR HAD NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL LRAV EDA+ A++E L F+ETSAL++ NVE +F T+L +IY I+SKK L A
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188
Query: 186 EAASSTG---LPQGTTINVANLSGNVKGKACC 214
E S G L QGT I VA KGK CC
Sbjct: 189 EEGESGGDSSLLQGTKIVVAGEETESKGKGCC 220
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 135/185 (72%), Positives = 154/185 (83%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
YK D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT++L ++ K +
Sbjct: 3 GYKGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+N RWL+ELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNKSDL HL AV ED + AEKE L F+ETSALEA NVE AF +L IY I+SK+
Sbjct: 123 LIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRT 182
Query: 182 LAAQE 186
+A QE
Sbjct: 183 VARQE 187
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 135/168 (80%), Positives = 152/168 (90%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDT
Sbjct: 17 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 76
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSD
Sbjct: 77 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 136
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHI 176
L HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I
Sbjct: 137 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/180 (74%), Positives = 155/180 (86%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL V+ K +K
Sbjct: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIK 63
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H D+NIV+M+
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVML 123
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNKSDL HL AV+ ED + AEKE L F+ETSALEA NVE AF +L IYHI+SKKA+
Sbjct: 124 VGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAV 183
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 162/211 (76%), Gaps = 4/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ VEGKTVKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+I AE+ LSF+ETSAL++ NVE AF IL +IY +S K +
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTD 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
G GT I K CC++
Sbjct: 185 RQGYGGG--SGTIIPAP--PTEPPKKQCCNS 211
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 142/228 (62%), Positives = 167/228 (73%), Gaps = 19/228 (8%)
Query: 6 DHEYDYLFK-------------------IVLIGDSGVGKSNILSRFTRNEFCLESKSTIG 46
+ EYD+LFK +VLIGDSGVGKSN+LSRFTRNEF L+SKSTIG
Sbjct: 3 NDEYDFLFKGNVATFPAQSPQLFIPFRYVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIG 62
Query: 47 VEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRW 106
VEFATR++QV+ KT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K QT+DNV RW
Sbjct: 63 VEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRW 122
Query: 107 LRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAF 166
L+ELRDHADSNIVIM+ GNKSDL HLRAV ++A+ A + LSF+ETSAL+A NVE AF
Sbjct: 123 LKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAF 182
Query: 167 QTILLDIYHIISKKALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q IL +IY I+S KA+ + L G TI V+ + CC
Sbjct: 183 QNILTEIYRIVSSKAIIEGGDSGQATLSSGRTIEVSKTPDTESKQGCC 230
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 135/214 (63%), Positives = 169/214 (78%), Gaps = 4/214 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LE+KSTIGVEFATR++ V+ K VKAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+ELRDH ++ +V+M+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-AA 184
K+DL HLRAV+ E+A AEKE + F+ETSALE+LNV+ AF +L IY+++S+K L
Sbjct: 124 KADLRHLRAVSTEEATEFAEKESIYFMETSALESLNVDNAFIEVLTQIYNVVSRKTLETV 183
Query: 185 QEAASSTGLPQGTTINVANLSGN---VKGKACCS 215
+ S+ LP+G TI + + VK CCS
Sbjct: 184 DDDPSTKALPKGETIVIGTKDDDVSAVKKSGCCS 217
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 169/213 (79%), Gaps = 6/213 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA-- 183
KSDL HLRAV +++++ AE+ LSF+ETSAL++ NVE+AF IL +IY I+S+K +
Sbjct: 125 KSDLRHLRAVPTDESKVFAERNTLSFIETSALDSTNVEQAFVQILTEIYKIVSQKNIRDG 184
Query: 184 --AQEAASSTGLPQGTTINVANLSGNVKGKACC 214
+++ SS P TI + + CC
Sbjct: 185 GNGEDSPSSDVKP--ITIPPTHGYTEPNKRKCC 215
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 141/208 (67%), Positives = 168/208 (80%), Gaps = 4/208 (1%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF ++SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K T++NVTRWL+ELRDHADSNIVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISKHITYENVTRWLKELRDHADSNIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV ++A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S K L E
Sbjct: 125 DLRHLRAVTTDEAKAFAAENHLSFIETSALDASNVELAFQNILTEIYRIVSSKVLPENEH 184
Query: 188 ASSTGLPQGTTINVANLSGNVKGKA-CC 214
S +P I +++ N +G CC
Sbjct: 185 GGS--IPD-RGIPLSDQPKNDQGGGKCC 209
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 141/194 (72%), Positives = 163/194 (84%), Gaps = 4/194 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF +SKSTIGVEFATR+L+V+GK VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI+K+ TF NV RWL+ELRDHADS+IV+M+ GNKSD
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ A GLSF+ETSAL+A NVE AFQ IL DIY I+S K+L +AA
Sbjct: 127 LKHLRAVLTDEAKQFAMDNGLSFIETSALDASNVEAAFQQILTDIYRIVSSKSL---DAA 183
Query: 189 SSTGLP-QGTTINV 201
P +GTT+ V
Sbjct: 184 DEVIQPSRGTTVTV 197
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/169 (79%), Positives = 152/169 (89%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 82
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 83 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 142
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY
Sbjct: 143 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 163/210 (77%), Gaps = 3/210 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QVEGKTVKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AE+ LSF+ETSAL++ NVE AF IL +IY +S + +
Sbjct: 125 KSDLRHLRAVPTDEAKAYAERNQLSFIETSALDSTNVEAAFTNILTEIYRSVSTRQVPPD 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ I +++ + K CC+
Sbjct: 185 RIVP---IHSQNNITLSSTNDAQNKKQCCT 211
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 166/211 (78%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+GK VKAQI
Sbjct: 5 EEEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGAL+VYDI K T++NV RWL+EL+DHAD+NIVIM+AGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALVVYDIAKHMTYENVERWLKELKDHADTNIVIMLAGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL HLRAV+ E+A+ AE+ LSF+ETSAL++ NVE AFQ IL +IY+I+ +KA A
Sbjct: 125 KCDLRHLRAVSTEEAKKFAEQHSLSFIETSALDSTNVEAAFQNILTEIYNIVIQKAPADG 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK--ACC 214
+ + I + + G CC
Sbjct: 185 GQGGGGSVSETKVIKIDDQKDEKSGSKMKCC 215
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 166/219 (75%), Gaps = 19/219 (8%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+L+RFTRNEF LESKSTIGVEFATR+++V K +KAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K+ T+ NV RWL ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV A++A AE LSF+ETSAL++ NVE AF+ IL +IY+I+S+K +
Sbjct: 125 KSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIYNIVSQKQMRDP 184
Query: 186 EAASSTGLPQGTTINVANL----------SGNVKGKACC 214
P+G TI N+ S NV+ K CC
Sbjct: 185 --------PEGDTIRPTNIEPIDVKPTVNSDNVR-KQCC 214
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 172/215 (80%), Gaps = 5/215 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D + DY+FK+VLIGDS VGKS +LSRF R+EF LESKSTIGVEF TRT+ V+GKT+KAQI
Sbjct: 5 DVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDIT++QTF++V RWL ELR+HAD+N+VIMM GN
Sbjct: 65 WDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL++ RA++ E+ + +EKEGL F+ETSAL++ NVE AF T+L +IY I+SKK+LAA
Sbjct: 125 KSDLSNSRAMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAAD 184
Query: 186 E-----AASSTGLPQGTTINVANLSGNVKGKACCS 215
+ A +P G I + + VK +ACCS
Sbjct: 185 DPNGGLANVMPPVPSGNKILLDDELTAVKKRACCS 219
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 163/209 (77%), Gaps = 1/209 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK+VLIGDSGVGKS++LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K +++NV RWLRELRDHAD NI+IM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLR++ E+A+ AE GLSF+ETSAL++ NVE AFQ IL +IY I+S++ +
Sbjct: 125 KSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQM-RD 183
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
P +V + + CC
Sbjct: 184 PPEGDVIRPDAEPADVRPSQADSVRRQCC 212
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/209 (67%), Positives = 163/209 (77%), Gaps = 3/209 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QVEGKTVKAQIWDT
Sbjct: 33 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDT 92
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T++ V RWL+ELRDHAD NIVIM+ GNKSD
Sbjct: 93 AGQERYRAITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDHADQNIVIMLVGNKSD 152
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ AEK LSF+ETSAL++ NVE AF IL +IY +S K +
Sbjct: 153 LRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHFGGDDRV 212
Query: 189 SSTGLPQGTT-INVANLSGNVKGKACCSN 216
+ P GT I ++ + K CCSN
Sbjct: 213 QVS--PVGTNGIVISPTTDPQTKKQCCSN 239
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/165 (82%), Positives = 150/165 (90%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKTVKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
KSDL HLRAV ++A+ AEK GLSFLETSAL++ NVE AFQTIL
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTIL 169
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/169 (79%), Positives = 152/169 (89%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWD
Sbjct: 4 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 63
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAG ERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKS
Sbjct: 64 TAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKS 123
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHI 176
DL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY I
Sbjct: 124 DLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 172
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 163/215 (75%), Gaps = 12/215 (5%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ VEGKTVKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+I AE+ LSF+ETSAL++ NVE AF IL +IY +S K + +
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGSD 184
Query: 186 E----AASSTGLPQGTTINVANLSGNVKGKACCSN 216
T +P T K CC++
Sbjct: 185 RQGYGGGGGTIIPAPPT--------EPPKKQCCNS 211
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/208 (66%), Positives = 164/208 (78%), Gaps = 3/208 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ +TVKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNIDARTVKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD+V RWL ELR HAD NIVIM+ GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
LR+VA EDA+ AE+E L F+ETSALEA+NVE AF T+L +IY ++SKK L A E +
Sbjct: 135 GTLRSVATEDAKEFAERENLFFMETSALEAVNVENAFMTVLTEIYRVVSKKNLVANEESD 194
Query: 190 STG---LPQGTTINVANLSGNVKGKACC 214
S+G L +GT I V KA C
Sbjct: 195 SSGNSSLLKGTKIVVPGQEPPPTSKATC 222
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 170/213 (79%), Gaps = 5/213 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK VLIGDSGVGKSN+L RFTRNEF +ESKSTIGVEFATR + ++ K +KAQI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGAL+VYDITK+ +FDNV RWL+ELRDHADSNIVIM+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL HLRAV+ E+AQ A + LSF+ETSA++A NVE+AFQT+L +I+ I+S +A+
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAM--- 180
Query: 186 EAASSTGLPQ-GTTINVANLSGNVKGKACCSNQ 217
E P G T+N+A G+ GK+ S Q
Sbjct: 181 EGGDEGAHPSAGQTLNIAPTIGD-SGKSKSSGQ 212
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 169/213 (79%), Gaps = 4/213 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FKIVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 10 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKAQI 69
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD+V +WL ELRDHAD+NIVIM+ GN
Sbjct: 70 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLIGN 129
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA- 184
KSDL LRAV EDA+ A+KE L F+ETSALEA NVE AF ++L +IY +ISKKAL A
Sbjct: 130 KSDLGTLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALIAN 189
Query: 185 -QEAASSTGLPQGTTINVANLSGNVKGK--ACC 214
QE+ S+ L +GT I V G+ +CC
Sbjct: 190 EQESGGSSSLLKGTNIVVPEQEPVSGGRSFSCC 222
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/215 (62%), Positives = 171/215 (79%), Gaps = 5/215 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D + DY+FK+VLIGDS VGKS +LSRF R+EF LESKSTIGVEF TRT+ V+GKT+KAQI
Sbjct: 5 DVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDIT++QTF++V RWL ELR+HAD+N+VIMM GN
Sbjct: 65 WDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL++ R ++ E+ + +EKEGL F+ETSAL++ NVE AF T+L +IY I+SKK+LAA
Sbjct: 125 KSDLSNSRTMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAAD 184
Query: 186 E-----AASSTGLPQGTTINVANLSGNVKGKACCS 215
+ A +P G I + + VK +ACCS
Sbjct: 185 DPNGGLANVMPPVPSGNKILLDDELTAVKKRACCS 219
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/214 (63%), Positives = 168/214 (78%), Gaps = 4/214 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LE+KSTIGVEFATR++ V+ K VKAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RWL+ELRDH ++ +V+M+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-AA 184
K+DL HLRAV+ E+A AEKE + F+ETSALE+LNV AF +L IY+++S+K L
Sbjct: 124 KADLRHLRAVSTEEATEYAEKENIYFMETSALESLNVGNAFVEVLTQIYNVVSRKTLETM 183
Query: 185 QEAASSTGLPQGTTINVANLSGN---VKGKACCS 215
+ +S LP+G TI + + VK CCS
Sbjct: 184 DDDPNSKALPKGETIVIGTKDDDVSAVKKSGCCS 217
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 162/203 (79%), Gaps = 1/203 (0%)
Query: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
+ +VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWDTAGQ
Sbjct: 3 VLTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 62
Query: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNH 131
ERYRAITSAYYRGAVGALLVYDI+K QT+DNV RWL+ELRDHADSNIVIM+ GNKSDL H
Sbjct: 63 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRH 122
Query: 132 LRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASST 191
LRAV ++A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL ++ +
Sbjct: 123 LRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGDSGQAP 182
Query: 192 GLPQGTTINVANLSGNVKGKACC 214
L G TI V+ + CC
Sbjct: 183 -LSSGRTIEVSKAPDTESKQGCC 204
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 167/211 (79%), Gaps = 4/211 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FKIVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ KTVKAQIWDTA
Sbjct: 13 DYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTVKAQIWDTA 72
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQTFD+V RWL ELR HAD+NIVIM+ GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNNIVIMLIGNKCDL 132
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ--EA 187
+LRAV EDA+ A++EGL FLETSALEA+NVE AF T+L DIY IISKKAL A +
Sbjct: 133 GNLRAVPIEDAREFAQREGLFFLETSALEAINVESAFLTVLTDIYRIISKKALIANDDQG 192
Query: 188 ASSTGLPQGTTINVANLSGNV--KGKACCSN 216
++ L GT + V +V K CCS+
Sbjct: 193 NGNSALLTGTKLVVPGEEQDVSTNNKYCCSS 223
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 169/214 (78%), Gaps = 4/214 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVI++ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVILLVGN 124
Query: 126 KSDLNHLRAVAA-EDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
KSDL HLRAV +A+ AE+ LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A
Sbjct: 125 KSDLRHLRAVCPLTEARAFAERH-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
+ A + I+V + K CC N
Sbjct: 184 RAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 134/217 (61%), Positives = 169/217 (77%), Gaps = 5/217 (2%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ + EYDYLFK+VLIGDSGVGKSN+LSRF R+EF LE++STIGVEFAT+T++V+ + VK
Sbjct: 10 YRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVK 69
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+R TF+N RWL+ELRDH D+NIV+M+
Sbjct: 70 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVML 129
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNK+DL HLRAV AEDA+ AE G +ETSALEA NVE AF +L IY ++S+ AL
Sbjct: 130 VGNKADLRHLRAVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNAL 189
Query: 183 AAQEAASSTGLPQGTTINVA---NLSGNVKGKACCSN 216
+ ++ P+G TI+V+ + V CCS+
Sbjct: 190 DIGDDPAAP--PRGRTIDVSAKDDAVTPVNSSGCCSS 224
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 137/213 (64%), Positives = 171/213 (80%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D++ DY+FK+VLIGDS VGKS +L+RF+RNEF LESK+TIGVEF TRT+ V+ KT+KAQI
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVDHKTIKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDITK+Q+FD+V RWL ELR HAD+NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL++LR V + A+ AEKE LSFLETSA+E+ NVE AF T+L +IY ++SKKAL A
Sbjct: 129 KSDLSNLRQVETDTAREFAEKESLSFLETSAMESTNVETAFFTVLSEIYKVVSKKALLAD 188
Query: 186 EAASSTGLPQGTTINVANLSGNVKGK--ACCSN 216
E ++ L GT I +A+ + K CCS+
Sbjct: 189 ENQGNSPLLPGTKIKLADKDDVIGAKKAGCCSS 221
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 139/202 (68%), Positives = 167/202 (82%), Gaps = 3/202 (1%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWDTAGQERY
Sbjct: 4 FVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 63
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKSDL HLRA
Sbjct: 64 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRA 123
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL ++A +T +
Sbjct: 124 VPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGDSAQAT-IG 182
Query: 195 QGTTINVANLSGN--VKGKACC 214
GT I+++ + + KG CC
Sbjct: 183 AGTNISLSKPADDDASKGGKCC 204
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/169 (79%), Positives = 151/169 (89%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVI + GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
KSDL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 171/216 (79%), Gaps = 2/216 (0%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
++ D++ DY+FK+VLIGDS VGKS +LSRF+RNEF LESK+TIGVEF TRT+ V+ KT+K
Sbjct: 6 HEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIK 65
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITK+Q+FD+V RWL ELR HAD+NIVIM+
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIML 125
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNKSDL++LR V + A++ AEKE LSFLETSA+E+ NVE AF +L +IY I+SK AL
Sbjct: 126 IGNKSDLSNLRQVDTDVARVYAEKEKLSFLETSAMESTNVETAFYAVLSEIYKIVSKNAL 185
Query: 183 AAQEAASSTGLPQGTTINVANLSGNVKGK--ACCSN 216
A E T L GT IN+ + + K CCS+
Sbjct: 186 IADENQGGTPLLSGTKINLTDKDDVIGSKRAGCCSS 221
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/209 (66%), Positives = 171/209 (81%), Gaps = 6/209 (2%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD +VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWD
Sbjct: 5 EYDV---VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWD 61
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKS
Sbjct: 62 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKS 121
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV ++A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + +
Sbjct: 122 DLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDG 181
Query: 188 ASSTGLPQGTTINVANLSGNVKGKA--CC 214
A +T + GT I+++ + + K+ CC
Sbjct: 182 AQAT-IGAGTNISLSKAADDEASKSGKCC 209
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 169/216 (78%), Gaps = 7/216 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D YDYL+KIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++ +GK +KAQI
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+KR +F+NV RWL+ELRDHAD NIV+++ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A + +EKEG++ +E SAL + NVE+AF IL +IY + S++ +A Q
Sbjct: 125 KSDLKHLRAVTQEEACMFSEKEGMACMEASALNSSNVEQAFHRILSEIYMLRSERQIANQ 184
Query: 186 EAASSTGLP---QGTTINVANLSGNVKG----KACC 214
+ T LP QG ++ + + KG +CC
Sbjct: 185 HDLTKTTLPIGSQGVRVDPVRVDLDSKGLKRKSSCC 220
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/218 (61%), Positives = 168/218 (77%), Gaps = 5/218 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
+AY+ + EYDYLFK+VLIGDSGVGKSN+LSRF R+EF L+++STIGVEFAT+T+QV+GK
Sbjct: 3 VAYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQVDGKL 62
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+N RWL ELRDH D+NIV+
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHITFENAERWLAELRDHTDANIVV 122
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL HLRAV E+A+ AE+ +ETSALE+ NVE AF +L +IY ++SKK
Sbjct: 123 MLVGNKADLRHLRAVPPEEARAFAERHRTFSMETSALESTNVEGAFTEVLGEIYRVVSKK 182
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKG---KACCS 215
AL + ++ P+G TINV V CCS
Sbjct: 183 ALDIGDDPAAP--PRGKTINVGAAKDEVSPVNTGGCCS 218
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 168/211 (79%), Gaps = 3/211 (1%)
Query: 6 DHEYD--YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+ EYD Y+ +VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+K+
Sbjct: 3 NDEYDVSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKS 62
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGAVGALLVYD++K QT++NVTRWL+ELRDHADSNIVIM+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLV 122
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNKSDL HLRAV ++A+ A + LSF+ETSAL+A NVE AFQ IL +I+ I+S KAL
Sbjct: 123 GNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALE 182
Query: 184 AQEAASSTGLPQGTTINVANLSGNVKGKACC 214
+ + +S+ L + + + K CC
Sbjct: 183 SGD-SSANQLGDRKVVEITKTPDSEKKPGCC 212
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/226 (61%), Positives = 168/226 (74%), Gaps = 18/226 (7%)
Query: 6 DHEYDYLFK-----------------IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVE 48
+ EYD+LFK +VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVE
Sbjct: 3 NDEYDFLFKGTSYTPRPAMSNPILRALVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 62
Query: 49 FATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLR 108
FATR++QV+ KT+K+QIWDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+
Sbjct: 63 FATRSIQVDSKTIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLK 122
Query: 109 ELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQT 168
ELRDHADSNIVIM+ GNKSDL HLRAV E+A+ A LSF+ETSAL+A NVE AFQ
Sbjct: 123 ELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQN 182
Query: 169 ILLDIYHIISKKALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
IL +I+ I+S KAL + ++A + L + + + CC
Sbjct: 183 ILTEIFRIVSSKALDSGDSAQNP-LSDRKVVEITKTQDPESKQGCC 227
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 160/212 (75%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGKS +LSRF RNEF L+SK+TIGVEF T+TL ++ K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQTFD++ RWL ELR HAD NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL LR V EDA+ A+ E LSF+ETSALEA NVE AF TIL +IY +ISKKAL A
Sbjct: 129 KSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIAN 188
Query: 186 EAASSTG---LPQGTTINVANLSGNVKGKACC 214
+ S G L +GT I V CC
Sbjct: 189 DETDSGGSSSLLKGTKIVVPGQEPQAASSGCC 220
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 163/214 (76%), Gaps = 3/214 (1%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+V + DY+FK+VLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ +TVKA
Sbjct: 10 EVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKA 69
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD+V RWL ELR HAD NIVIM+
Sbjct: 70 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLI 129
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNKSDL LR V EDA+ AE+E L F+ETSALE+ NVE AF T+L +IY I+SKK L
Sbjct: 130 GNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLV 189
Query: 184 AQEAASSTG---LPQGTTINVANLSGNVKGKACC 214
A E S+G L +GT I V KA C
Sbjct: 190 ANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASC 223
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/182 (73%), Positives = 156/182 (85%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EY +VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYXXXXPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EA 187
A
Sbjct: 185 AA 186
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/165 (79%), Positives = 149/165 (90%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 133 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 192
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 193 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 252
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL
Sbjct: 253 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 297
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/215 (65%), Positives = 164/215 (76%), Gaps = 17/215 (7%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y + VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDT
Sbjct: 12 YTRMNPFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 71
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GNKSD
Sbjct: 72 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 131
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLRAV ++A+ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 132 LRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP--- 188
Query: 189 SSTGLPQGTTINVANL-------SGNVKG--KACC 214
P+G TI N+ + N +G K CC
Sbjct: 189 -----PEGDTIRPQNVEQIEVKPTMNAEGVRKQCC 218
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
Length = 167
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 133/167 (79%), Positives = 150/167 (89%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWD
Sbjct: 1 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 60
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAG ERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVI + GNKS
Sbjct: 61 TAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKS 120
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
DL HLRAV ++A+ AEK GLSF+ETSAL++ NVE AFQTIL +IY
Sbjct: 121 DLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 167
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/200 (68%), Positives = 167/200 (83%), Gaps = 3/200 (1%)
Query: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
+IGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWDTAGQERYRA
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 60
Query: 77 ITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAVA 136
ITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKSDL HLRAV
Sbjct: 61 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 120
Query: 137 AEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLPQG 196
E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + ++A +T + G
Sbjct: 121 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQAT-IGAG 179
Query: 197 TTINVANLSGN--VKGKACC 214
T I+++ + + KG CC
Sbjct: 180 TNISLSKPADDDAAKGGKCC 199
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 169/214 (78%), Gaps = 8/214 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFK VLIGDSGVGKSN+L RFTRNEF +ESKSTIGVEFATR + ++ K +KAQI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGAL+VYDITK+ +FDNV RWL+ELR+HADSNIVIM+ GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL HLRAV+ E+AQ A + LSF+ETSA++A NVE+AFQT+L +I+ I+S ++L
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSL--- 180
Query: 186 EAASSTGLPQ-GTTINVANLSGNVKGKA----CC 214
EA P G T+N+A ++ K CC
Sbjct: 181 EAGDDGVHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/209 (66%), Positives = 164/209 (78%), Gaps = 3/209 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD + VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQI
Sbjct: 3 NDEYDVM---VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 59
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHADSNIVIM+ GN
Sbjct: 60 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 119
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL
Sbjct: 120 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQG 179
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
E + + ++ + + K CC
Sbjct: 180 EGSGPVLGNDRKVLEISKSADAEQKKGCC 208
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 164/204 (80%), Gaps = 1/204 (0%)
Query: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
F++VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQE
Sbjct: 5 FELVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHL 132
RYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GNKSDL HL
Sbjct: 65 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 124
Query: 133 RAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTG 192
RAV ++A+ AEK LSF+ETSAL++ NVE AFQ IL +IY I+S+K + ++
Sbjct: 125 RAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDSPDDDNSP 184
Query: 193 LPQGTTINVANL-SGNVKGKACCS 215
TI+VA + + + CCS
Sbjct: 185 SNNVQTIHVAPTDNAAPRQQKCCS 208
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 166/218 (76%), Gaps = 15/218 (6%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK+VLIGDSGVGKS++LSRFTRNEF ++SKSTIGVEFATR+L+V+ KT+KAQIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTIKAQIWDT 67
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGAVGALLVYDI+K+ +F NV RWL+EL+DHADSNIVIM+ GNKSD
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIMLVGNKSD 127
Query: 129 LNHLRAVAAEDAQILAEKEG-----------LSFLETSALEALNVEKAFQTILLDIYHII 177
L HLRAV +AQ E++ + F+ETSAL++ NVE AFQ IL DIY ++
Sbjct: 128 LKHLRAVPTAEAQSYTEEKSKLEDGTESSNPIRFIETSALDSTNVEAAFQNILTDIYQLV 187
Query: 178 SKKALAAQEAASSTGLPQGTTINVANLSGNVKGKA-CC 214
+ KAL E S G TINV S + KA CC
Sbjct: 188 ATKAL---EGGDSIKPTNGETINVQPTSDSDNKKAGCC 222
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 173/216 (80%), Gaps = 4/216 (1%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ + DY+FK+VLIGDS VGKS ILSRF R+EF L+SK+TIGVEF TRT+ +E K+VKAQ
Sbjct: 3 MNPKIDYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKAQ 62
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD+V RWL ELR+HAD+NIVIM+ G
Sbjct: 63 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIMLVG 122
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-A 183
NK DL++LRAV EDA+ A+KEGL FLETSA+EA NVE AF T+L +I+ I+SKK+L A
Sbjct: 123 NKCDLDNLRAVPTEDAKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLIA 182
Query: 184 AQEAASSTGLP-QGTTINVANLSGN--VKGKACCSN 216
+Q+ + GT+I V + K K+CC++
Sbjct: 183 SQDQGNGNHASLSGTSIVVPGQEQDTTTKKKSCCTS 218
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 164/210 (78%), Gaps = 3/210 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF +ESKSTIGVEFAT+++Q E K +KAQI
Sbjct: 59 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIKAQI 118
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDITK TF+N RWL+ELRDHA+SNIV+M+ GN
Sbjct: 119 WDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVMLVGN 178
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL HLR V+ E+A+ AEK L+F+ETSAL++ V+ AFQ IL +IY +++KK ++
Sbjct: 179 KCDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNKKQMSGN 238
Query: 186 EAASSTGLPQGTTI--NVANLSGNVKGKAC 213
+S + QG I N + G AC
Sbjct: 239 -GNNSLNIGQGERIALNSGGDKASGDGSAC 267
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 159/212 (75%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGKS +LSRF RNEF L+SK+TIGVEF T+TL ++ K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQTFD++ RWL ELR HAD NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL LR V EDA+ A+ E LSF+ETSALEA NVE AF TIL +IY +ISKKAL A
Sbjct: 129 KSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIAN 188
Query: 186 EAASSTG---LPQGTTINVANLSGNVKGKACC 214
+ S G L +GT V CC
Sbjct: 189 DETDSGGSSSLLKGTKXVVPGQEPQAASSGCC 220
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/169 (77%), Positives = 151/169 (89%), Gaps = 1/169 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQIWD
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 66
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GNKS
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKS 126
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILL-DIYH 175
DL HLR+V ++A++ AE+ GLSF+ETSAL++ NVE AFQ IL D+ H
Sbjct: 127 DLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTGDVLH 175
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 163/211 (77%), Gaps = 5/211 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYD TK+QTF N RWL+ELR+HAD NIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K D H+R V DA A++ LSF+ETSAL+A NVE AFQ IL +IY I+S KAL
Sbjct: 123 KIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 EAASSTGLPQG--TTINVANLSGNVKGKACC 214
E SS+ P G I ++ + CC
Sbjct: 180 ENGSSSQNPLGDRKVIEISKTQDADAKQKCC 210
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/165 (79%), Positives = 148/165 (89%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE AFQ IL
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNIL 169
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 166/214 (77%), Gaps = 5/214 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+ DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIW
Sbjct: 10 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR HAD NIVIM+ GNK
Sbjct: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
+DL RAV EDA+ A+KEGL FLETSA+EA NVE AF T+L +I++I++KK LAA E
Sbjct: 130 TDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLTEIFNIVNKKNLAADE 189
Query: 187 AASSTGLP---QGTTINVANLSGNVKG-KACCSN 216
S G P G I V + G KACCS+
Sbjct: 190 -NQSNGNPASLTGKKILVPGPGQVIPGKKACCSS 222
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 166/212 (78%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGK+ +L+RF+RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL LRAV EDAQ AE+E L F+ETSALE+ NVE AF TIL +IY IISKK+LAA
Sbjct: 129 KCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAG 188
Query: 186 EA---ASSTGLPQGTTINVANLSGNVKGKACC 214
E S+ L +GT+I V + K CC
Sbjct: 189 EEIDIGSNPALFKGTSIVVPGQDQDSGRKGCC 220
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/209 (65%), Positives = 163/209 (77%), Gaps = 4/209 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF+RNEF L+SKSTIGVEF TRTL ++ KTVKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR+HAD NIVI++ GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGNKSDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA- 188
+ R V EDA+ AEKEGL FLETSAL+A NVE +F T+L +IY+I++KK LAA E+
Sbjct: 135 ENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNILNKKNLAADESQG 194
Query: 189 ---SSTGLPQGTTINVANLSGNVKGKACC 214
S++ L Q I K CC
Sbjct: 195 NGNSASLLGQKIVIPGPGQEVPAKSSMCC 223
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 162/203 (79%), Gaps = 2/203 (0%)
Query: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
K+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQER
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
YRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLR
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 120
Query: 134 AVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGL 193
AV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A + A +
Sbjct: 121 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPG 180
Query: 194 PQGTTINVANLSGNVKGKA--CC 214
I+V + K CC
Sbjct: 181 NNVVDISVPPTTDGQKPNKLQCC 203
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 162/204 (79%), Gaps = 2/204 (0%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A + A +
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN 180
Query: 195 QGTTINVANLSGNVKGKA--CCSN 216
I+V + K CC N
Sbjct: 181 NVVDISVPPTTDGQKPNKLQCCQN 204
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/182 (71%), Positives = 158/182 (86%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D+EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFAT+++ EGKT+KAQI
Sbjct: 5 DNEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYD+TK TF+NV RWL+ELRDHA++NIV+M+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL RAV E+A +AE+ L+F+ETSAL+A V+ AFQ IL +IY +++KK LA++
Sbjct: 125 KSDLKPQRAVPTEEAMAMAEQHNLAFIETSALDASGVDIAFQNILTEIYRLMNKKQLASE 184
Query: 186 EA 187
A
Sbjct: 185 GA 186
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/208 (65%), Positives = 160/208 (76%), Gaps = 3/208 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS +L+RF RN+F L+SK+TIGVEF TRTL ++ + VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD+V RWL ELR HAD NIVIM+ GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKSDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
LRAV EDA+ AE+E L F+ETSALEA+NVE AF T+L +IY +SKK L A E
Sbjct: 135 GTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANEEPD 194
Query: 190 STG---LPQGTTINVANLSGNVKGKACC 214
S+G L +GT I V KA C
Sbjct: 195 SSGNSSLLKGTKIVVPGQEPPSTLKATC 222
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/165 (79%), Positives = 149/165 (90%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
KSDL HLRAV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 169
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/205 (66%), Positives = 162/205 (79%), Gaps = 2/205 (0%)
Query: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
K VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQER
Sbjct: 13 KFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
YRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GNKSDL HLR
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLR 132
Query: 134 AVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGL 193
AV ++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A + A +
Sbjct: 133 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPG 192
Query: 194 PQGTTINVANLSGNVKGKA--CCSN 216
I+V + K CC N
Sbjct: 193 NNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 167/213 (78%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D++ DY+FK+VLIGDS VGKS +LSRF+RNEF LESK+TIGVEF TRT+ V+ KT+KAQI
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA++VYDITK Q+FD+V RWL ELR HAD+NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAHADANIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL++LR V + A+ AEK+GLSFLETSA+E+ NVE AF T+L +IY +SKKAL A
Sbjct: 129 KSDLSNLRQVETDTAREYAEKQGLSFLETSAMESTNVETAFFTVLSEIYKTVSKKALIAD 188
Query: 186 EAASSTGLPQGTTINVANLSGNV--KGKACCSN 216
E L GT I + + + K CCS+
Sbjct: 189 ENQGGAPLLPGTKITLTDKDDVIGTKKAGCCSS 221
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 141/219 (64%), Positives = 167/219 (76%), Gaps = 7/219 (3%)
Query: 3 YKVDH--EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
YK D+ + DY+FK+VLIGDS VGKS +L+RF RNEF L+SK+TIGVEF T+TL ++ KT
Sbjct: 5 YKGDYSQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVIDHKT 64
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD+V RWL+ELR HAD NIVI
Sbjct: 65 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVI 124
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL L+AV EDA+ AE+E L F+ETSALEA NVE AF ++L +IY IISKK
Sbjct: 125 MLVGNKSDLGTLQAVPTEDAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRIISKK 184
Query: 181 ALAAQEAASSTG---LPQGTTINVANLSGNVKGKA--CC 214
L A E S G L +GT I V +G CC
Sbjct: 185 TLVANEEVESGGNSSLLKGTKIIVPGKEPKSEGSKYNCC 223
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 168/204 (82%), Gaps = 5/204 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV-EGK 59
MA K D YDYL+KIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++ + EGK
Sbjct: 1 MAAK-DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGK 59
Query: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIV 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQ+F+NV RWL+ELRDHAD NIV
Sbjct: 60 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIV 119
Query: 120 IMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
I++ GNKSDL HLRAV+ E+A A +E L+F+ETSAL+A NVE+AF IL +IY + K
Sbjct: 120 ILLVGNKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQK 179
Query: 180 KALAAQEAASSTGLP-QGTTINVA 202
K + ++ ST P +G I+V+
Sbjct: 180 KQI--EDNPQSTAQPGRGQKIHVS 201
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/213 (64%), Positives = 164/213 (76%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIG SGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++N RWL+ELRDHADSNIVI + G
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKPLTYENGERWLKELRDHADSNIVIRLVGT 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KS L HLRAV ++A+ +EK LSF+ TSAL++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 125 KSALRHLRAVPTDEARAFSEKNNLSFIATSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 186 EAASSTGLPQGTTINVANLSG--NVKGKACCSN 216
A + I+V + N CC N
Sbjct: 185 AAHDESPGNNFVDISVPPTTDGQNPNKLQCCQN 217
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 161/203 (79%), Gaps = 2/203 (0%)
Query: 16 VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYR 75
VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 60
Query: 76 AITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAV 135
AITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRAV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 120
Query: 136 AAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLPQ 195
++A+ AEK LSF+ETSAL++ NVE+AF+ IL +IY I+S+K +A + A +
Sbjct: 121 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN 180
Query: 196 GTTINVANLSGNVKGKA--CCSN 216
I+V + K CC N
Sbjct: 181 VVDISVPPTTDGQKPSKLQCCQN 203
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 137/201 (68%), Positives = 163/201 (81%), Gaps = 2/201 (0%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF L++KSTIGVEFATR++QV+ KT+KAQIWDTAGQERY
Sbjct: 22 MVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 81
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI+K QT+DNV RWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 82 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 141
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + ++ + GL
Sbjct: 142 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQA-GLG 200
Query: 195 QGTTINVANLSGNVKGK-ACC 214
+ N S + + K CC
Sbjct: 201 DRRPVVDINPSQDPETKQGCC 221
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 135/208 (64%), Positives = 159/208 (76%), Gaps = 3/208 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTLQV+ +T+KAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIWDTA 75
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD++ RWL ELR HAD N+VIM+ GNKSDL
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGNKSDL 135
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
LR V EDA+ A +E L F+ETSALEA NVE AF+T L +IY +SKK L A E
Sbjct: 136 GTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLVANEETD 195
Query: 190 STG---LPQGTTINVANLSGNVKGKACC 214
S+G L +GT I V KA C
Sbjct: 196 SSGNSSLLKGTKIIVPGQEPAPPAKAAC 223
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 135/213 (63%), Positives = 164/213 (76%), Gaps = 4/213 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FKIVLIGDS VGKS +L+RF RNEFC++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 8 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDNKTVKAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 68 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL LRAV EDAQ A++E L F+ETSALE+ NVE AF T+L +IY +ISKK L A
Sbjct: 128 KCDLGSLRAVPIEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRVISKKTLTAN 187
Query: 186 E---AASSTGLPQGTTINVA-NLSGNVKGKACC 214
E ++GL +GT I V + K CC
Sbjct: 188 EELDTNGTSGLLKGTRIIVPGHDQAPAKKGGCC 220
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 162/209 (77%), Gaps = 3/209 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 68
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GALLVYDITKRQ+FD++ RWL ELR HAD NIVIM+ GNKSDL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 128
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV++EDA+ AEKE L FLETSAL+A NVE AFQT+L +I+ I SKK +AA A+
Sbjct: 129 EEERAVSSEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAADPKAN 188
Query: 190 STGLPQ--GTTINVANLSGNVKGKACCSN 216
P G + V + + CCS+
Sbjct: 189 GAA-PSLAGKKVIVPGPAQEIPKSKCCSS 216
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 138/215 (64%), Positives = 163/215 (75%), Gaps = 4/215 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL ++ K VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKAVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL LRAV EDAQ AE+E L F+ETSALEA NVE AF T+L DIY IISKK L A
Sbjct: 129 KSDLGSLRAVPTEDAQEFAERENLFFMETSALEATNVETAFLTVLTDIYKIISKKTLTAN 188
Query: 186 EAASSTG---LPQGTTINVANLSGNVKGK-ACCSN 216
STG L +GT I V + K CC +
Sbjct: 189 TDTDSTGSSTLLKGTKIIVPGGPDSAAQKGGCCGS 223
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 161/209 (77%), Gaps = 3/209 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL +E K+VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKSVKAQIWDTA 68
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GALLVYDITKRQ+FD++ RWL ELR HAD NIVIM+ GNKSDL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 128
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV+ EDA+ AEKE L FLETSAL+A NVE AFQT+L +I+ I SKK +AA A+
Sbjct: 129 EDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAADPRAN 188
Query: 190 STGLPQ--GTTINVANLSGNVKGKACCSN 216
P G + V + + CCS+
Sbjct: 189 GAA-PSLAGKKVIVPGPAQEIPKSKCCSS 216
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 136/208 (65%), Positives = 162/208 (77%), Gaps = 16/208 (7%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQIWDTAGQERY
Sbjct: 88 FVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERY 147
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GNKSDL HLR+
Sbjct: 148 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRS 207
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V ++A++ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K + P
Sbjct: 208 VPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP--------P 259
Query: 195 QGTTINVANLSG-NVKG-------KACC 214
+G I +N+ +VK K CC
Sbjct: 260 EGDVIRPSNVEPIDVKPTVTADVRKQCC 287
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 49/51 (96%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV 56
+ EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++V
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 168/214 (78%), Gaps = 5/214 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+ DY+FK+VLIGDSGVGKS ILSR+ RNEF L+SK+TIGVEF TRTL ++ K+VKAQIW
Sbjct: 12 QKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 71
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+RQTFD++ RWL ELR++AD NIVI++ GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNNADKNIVIILVGNK 131
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL RA++ EDA+ AEKEGL FLETSAL A+NVE AF T+L +I++I++KK+L A E
Sbjct: 132 SDLEDQRAISMEDAKDFAEKEGLFFLETSALNAVNVESAFSTVLTEIFNIVNKKSLVAGE 191
Query: 187 AASS--TGLPQGTTINVANLSGNV---KGKACCS 215
+ G G I++ G V K K CC+
Sbjct: 192 GEGNGDPGSLAGKKIDIVPGPGQVIPTKNKLCCN 225
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 134/201 (66%), Positives = 160/201 (79%), Gaps = 1/201 (0%)
Query: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
K L DSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWDTAGQER
Sbjct: 7 KPQLTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQER 66
Query: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
YRAITSAYYRGAVGALLVYDI+K QT+DNV RWL+ELRDHADSNIVIM+ GNKSDL HLR
Sbjct: 67 YRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLR 126
Query: 134 AVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGL 193
AV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + ++ + G
Sbjct: 127 AVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSQAPLG- 185
Query: 194 PQGTTINVANLSGNVKGKACC 214
+ I+V+ + + CC
Sbjct: 186 DRRPVIDVSQTPDSESKQGCC 206
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 161/214 (75%), Gaps = 3/214 (1%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+V DY+FK+VLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTLQV+ +T+KA
Sbjct: 9 EVGQRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKA 68
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD++ RWL ELR HAD N+VIM+
Sbjct: 69 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLI 128
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNKSDL LR V EDA+ A +E L F+ETSALEA NVE AF+T L +IY +SKK L
Sbjct: 129 GNKSDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLV 188
Query: 184 AQEAASSTG---LPQGTTINVANLSGNVKGKACC 214
A E S+G L +GT I V KA C
Sbjct: 189 ANEETDSSGNSSLLKGTKIIVPGQEPAPPAKAAC 222
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/197 (70%), Positives = 161/197 (81%), Gaps = 8/197 (4%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SKSTIGVEF TRTL ++ KTVKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR+HAD NIVI++ GNK DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
+ R V EDA+ AEKEGL FLETSALEA NVE AF T+L +IY+I++KK+LAA E+
Sbjct: 135 VNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADES-- 192
Query: 190 STGLPQGTTINVANLSG 206
QG N A+LSG
Sbjct: 193 -----QGNG-NSASLSG 203
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/219 (62%), Positives = 165/219 (75%), Gaps = 11/219 (5%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+YDYLFK+VL+GDSGVGKSN+LSRFTRN F L+SKSTIGVEFATRT+QV+GKT+KAQIWD
Sbjct: 15 DYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWD 74
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADS-NIVIMMAGNK 126
TAGQERYRAITSAYYRGA GALLVYD+T+ TF++ RWLRELRDHAD +M+ GNK
Sbjct: 75 TAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNK 134
Query: 127 SDL---------NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHII 177
+DL +H RAV DA LAE+EGLSF+ETSAL+A NV+ AF+T+L +IY +
Sbjct: 135 TDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEIYRAV 194
Query: 178 SKKALAAQEAASSTG-LPQGTTINVANLSGNVKGKACCS 215
S+KALAA A G + +G I V+ CC+
Sbjct: 195 SRKALAASSAGDDAGAVGEGQAIQVSASDSAGLTTRCCA 233
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 170/219 (77%), Gaps = 5/219 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV-EGK 59
MA K D YDYL+KIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++ + EGK
Sbjct: 1 MAAK-DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGK 59
Query: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIV 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQ+F+NV RWL+ELRDHAD NIV
Sbjct: 60 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIV 119
Query: 120 IMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
I++ GNKSDL HLRAV+ E+A A +E L+F+ETSAL+A NVE+AF IL +IY + K
Sbjct: 120 ILLVGNKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQK 179
Query: 180 KALAA-QEAASSTGLPQGTTINVANLSGNVKG--KACCS 215
K + ++ + G Q ++ ++ + CCS
Sbjct: 180 KQIEDNPQSTTQPGRGQKIHLDEERTDSQIRQSRRGCCS 218
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/236 (59%), Positives = 167/236 (70%), Gaps = 28/236 (11%)
Query: 6 DHEYD-------YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
+ EYD +LFK+VLIGDSG GKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+
Sbjct: 3 NDEYDVSPRPLTFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDS 62
Query: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
KT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K QT+DNV RWL+ELRDHADSNI
Sbjct: 63 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNI 122
Query: 119 VIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL-------- 170
VIM+ GNKSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL
Sbjct: 123 VIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTGIAPVGI 182
Query: 171 ------------LDIYHIISKKALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
++IY I+S KAL + +S G + I++ CC
Sbjct: 183 SKRRSLTAILFFVEIYRIVSSKALEGESGGASVG-ERRQIIDIEKTQDTENKGGCC 237
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 160/204 (78%), Gaps = 4/204 (1%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KTVKAQIWDTAGQERY
Sbjct: 30 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERY 89
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI K T++N RWL+EL+DHAD+NIVIM+ GNKSDL HLRA
Sbjct: 90 RAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRA 149
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V ++A+ AEK GLSFLETSAL++ NVE AF IL +IY I+S++ + Q A S P
Sbjct: 150 VPTDEARSFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQITGQ--AESEFGP 207
Query: 195 QGTTINVANLSGNVKGK--ACCSN 216
T + L +G+ CC N
Sbjct: 208 SSTIEPIQVLPTQQEGRQAPCCQN 231
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/233 (60%), Positives = 168/233 (72%), Gaps = 29/233 (12%)
Query: 9 YDYLFKIVLIGDSGVGKS-------------------------NILSRFTRNEFCLESKS 43
+DYLFK+VLIGDSGVGKS N+LSRFTRNEF LE+KS
Sbjct: 7 FDYLFKVVLIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLSRFTRNEFNLETKS 66
Query: 44 TIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV 103
TIGVEFATR++ V+GKT+KAQIWDTAGQERYRAIT+AYYRGAVGALLVYDI K T+ +V
Sbjct: 67 TIGVEFATRSITVDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHGTYVDV 126
Query: 104 TRWLRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVE 163
TRWL+ELRDHADSNIVIM+ GNKSDL HLRAV ++A+ A + GLSF+ETSAL+A NVE
Sbjct: 127 TRWLKELRDHADSNIVIMLVGNKSDLKHLRAVPTDEAKTFATENGLSFIETSALDASNVE 186
Query: 164 KAFQTILLDIYHIISKKALAAQEAASSTGLPQGTTINVANL--SGNVKGKACC 214
AFQTIL DIY I+S K+L ++++ G +I VA S + CC
Sbjct: 187 SAFQTILTDIYRIVSSKSL--EQSSDPIKPSSGDSITVAPSVDSNTNQNSKCC 237
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 165/210 (78%), Gaps = 1/210 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FKIVLIGDS VGKS +L+RF RNEF ++SK+TIGVEF T+TL + KTVKAQI
Sbjct: 8 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHNKTVKAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD +I+IM+ GN
Sbjct: 68 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKSIIIMLIGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL LRAV AEDA+ A++E L F+ETSALEA NVE AF T+L +IY IISK+ LA
Sbjct: 128 KCDLGSLRAVPAEDAKEFAQRENLFFMETSALEATNVETAFLTMLTEIYRIISKRTLAGN 187
Query: 186 -EAASSTGLPQGTTINVANLSGNVKGKACC 214
E+ ++G +GT I V + N + K CC
Sbjct: 188 DESNENSGAFKGTRILVPSQEQNSEKKGCC 217
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 165/215 (76%), Gaps = 5/215 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQTFD++ RWL ELR HAD NIVI++ GN
Sbjct: 71 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGN 130
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA- 184
KSDL RAV EDA+ AEKEGL FLETSALE+ NVE AF T+L +I+ I+++K LAA
Sbjct: 131 KSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFSIMNRKNLAAG 190
Query: 185 --QEAASSTGLPQGTTINVANLSGNV--KGKACCS 215
Q +S L G I + + + K K CCS
Sbjct: 191 ENQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCS 225
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 164/209 (78%), Gaps = 3/209 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWDTA 68
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GALLVYDIT+RQ+FD++ RWL ELR HAD NIVIM+ GNKSDL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKSDL 128
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA- 188
RAV+ EDA+ AEKE L FLETSAL+A NVE AFQT+L +I+ I SKK + ++ +
Sbjct: 129 EEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVSEPKSN 188
Query: 189 -SSTGLPQGTTINVANLSGNVKGKACCSN 216
++ +P GT + V + + CCS+
Sbjct: 189 GAAPAMP-GTKVLVPGPAQEIPKSKCCSS 216
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/187 (68%), Positives = 154/187 (82%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+YDYLFK+VLIGDSGVGKSNILSRFTR EF LES+STIGVEFAT+++++ K VKAQIWD
Sbjct: 14 DYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGEKVVKAQIWD 73
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI+KR +FDN RWL+ELR+HADS+IV+M+ GNK
Sbjct: 74 TAGQERYRAITSAYYRGAVGALLVYDISKRSSFDNAARWLKELREHADSDIVVMLVGNKC 133
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL+HLRA+ E+A+ L F+ETSALEA NVE+AFQ IL DIY + S K +Q A
Sbjct: 134 DLSHLRAIEEEEAEKFCSDNDLLFIETSALEATNVEEAFQNILEDIYKVNSSKPTPSQAA 193
Query: 188 ASSTGLP 194
++ G P
Sbjct: 194 GAAAGDP 200
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 166/209 (79%), Gaps = 3/209 (1%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+Y YLFK+VLIGDSGVGKSN+LSRF RNEF +SKSTIGVEFATR+++ +GKT+K+QIWD
Sbjct: 5 DYHYLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI++++TF++V RWL+ELRDHAD++IVIM+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADASIVIMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL LRAV E+A+ A + L F+ETSAL+ NVE AFQ IL ++Y ++S KA+ +
Sbjct: 125 DLKSLRAVPTEEAKEFATRNQLLFMETSALDGGNVETAFQDILANVYKVVSNKAMENESN 184
Query: 188 ASSTGLPQGTTINVANLSGNVK---GKAC 213
+TG G +I VA + N K GK C
Sbjct: 185 RVATGPGAGKSITVAPTTTNAKPASGKCC 213
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/167 (78%), Positives = 145/167 (86%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ V+ KT+KAQIWD
Sbjct: 41 EYDLLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDTKTIKAQIWD 100
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI K T+ NV RWL+EL+DHADSNIVIM+ GNKS
Sbjct: 101 TAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVQRWLKELKDHADSNIVIMLVGNKS 160
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
DL HLRAV E+A+ A EGLSF+ETSAL+A NVE AFQTIL Y
Sbjct: 161 DLRHLRAVPTEEAKQFATDEGLSFIETSALDASNVENAFQTILTGPY 207
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/229 (60%), Positives = 163/229 (71%), Gaps = 27/229 (11%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERY
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 66
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 67 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 126
Query: 135 VAAEDAQ---------------------------ILAEKEGLSFLETSALEALNVEKAFQ 167
V ++A+ IL EK GLSF+ETSAL++ NVE AFQ
Sbjct: 127 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEKNGLSFIETSALDSTNVEAAFQ 186
Query: 168 TILLDIYHIISKKALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
TIL +IY I+S+K ++ + + I+V + N CC N
Sbjct: 187 TILTEIYRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQN 235
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 162/209 (77%), Gaps = 4/209 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF+RNEF L+SKSTIGVEF TRTL ++ KTVKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR+HAD NIVI++ GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGNKSDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA- 188
+ R V EDA+ AEKEGL FLETSAL+A NVE +F T+L +IY+ ++KK LAA E+
Sbjct: 135 ENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNTVNKKNLAADESQG 194
Query: 189 ---SSTGLPQGTTINVANLSGNVKGKACC 214
S++ L Q I K CC
Sbjct: 195 NGNSASLLGQKIIIPGPAQEIPAKSNMCC 223
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 163/209 (77%), Gaps = 3/209 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKSVKAQIWDTA 67
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GALLVYDITKRQ+FD++ RWL ELR HAD NIVIM+ GNKSDL
Sbjct: 68 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 127
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV+ EDA+ AEKE + FLETSAL+A NVE AFQT+L +I+ I SKK +AA+ A+
Sbjct: 128 EDERAVSTEDAKEFAEKENVFFLETSALQATNVENAFQTVLSEIFKIHSKKNIAAEPKAN 187
Query: 190 STGLPQ--GTTINVANLSGNVKGKACCSN 216
+ P G + V + + CCS+
Sbjct: 188 GSA-PSLAGKKVLVPGPAQEIPKSKCCSS 215
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/193 (68%), Positives = 156/193 (80%), Gaps = 3/193 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M+ + D YDYLFKIVL+GDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT++++ K
Sbjct: 1 MSGETDDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNKI 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T T+DN+ +WL ELRDHAD++IVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTSGDTYDNIEKWLSELRDHADASIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK DL HLR A AQ AEKEGL F+ETSAL A NVE AF L +Y ++SK
Sbjct: 121 MLVGNKCDLEHLRVTEAATAQQFAEKEGLMFIETSALNATNVEHAFIDSLGRVYDVVSKL 180
Query: 181 ALA---AQEAASS 190
+A +Q AA+S
Sbjct: 181 KMACTPSQSAAAS 193
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/186 (72%), Positives = 154/186 (82%), Gaps = 3/186 (1%)
Query: 6 DHEYDY---LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
+ EYD VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+K
Sbjct: 3 NDEYDVSPACHTFVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIK 62
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHADSNIVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIML 122
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNKSDL HLRAV E+A+ A + LSF+ETSAL+A NVE AFQ IL +IY I+S KAL
Sbjct: 123 VGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL 182
Query: 183 AAQEAA 188
E
Sbjct: 183 DQGEGG 188
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/213 (63%), Positives = 165/213 (77%), Gaps = 3/213 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+ DY+FK+VLIGDS VGK+ IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIW
Sbjct: 10 QKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR HAD NIVIM+ GNK
Sbjct: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
+DL RAV EDA+ A+KEGL FLETSA+EA +E AF T+L +I++I++KK LAA E
Sbjct: 130 TDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADE 189
Query: 187 AASSTGLPQ--GTTINVANLSGNVKG-KACCSN 216
S++ G I V + G KACCS+
Sbjct: 190 NQSNSNPASLTGKKILVPGPGQVIPGKKACCSS 222
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/208 (64%), Positives = 159/208 (76%), Gaps = 3/208 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS GKS +L+RF RN+F L+SK+TIGVEF TRTL ++ + VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD+V RWL ELR HAD NIVIM+ GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKSDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
LRAV EDA+ AE+E L F+ETSALEA+NVE AF T+L +IY +SKK L A E
Sbjct: 135 GTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANEEPD 194
Query: 190 STG---LPQGTTINVANLSGNVKGKACC 214
S+G L +GT I V KA C
Sbjct: 195 SSGNSSLLKGTKIVVPGQEPPSTLKATC 222
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 165/214 (77%), Gaps = 5/214 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+ DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIW
Sbjct: 10 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR HAD NIVIM+ GNK
Sbjct: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
+DL RAV EDA+ A+KEGL FLETSA+EA N+E AF T+L +I++I++KK LAA +
Sbjct: 130 TDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADD 189
Query: 187 AASSTGLPQGTTINVANLSGN----VKGKACCSN 216
S G P T + G + KACCS+
Sbjct: 190 -NQSNGNPASLTGKKILVPGPGQVIPEKKACCSS 222
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 161/209 (77%), Gaps = 3/209 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF ++SK+TIGVEF TRTL ++ K+VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIWDTA 67
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GALLVYDITKRQ+FD++ RWL ELR HAD NIVIM+ GNKSDL
Sbjct: 68 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 127
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV+ EDA+ AEKE L FLETSAL+A NVE AFQT+L +I+ I SKK +AA A+
Sbjct: 128 EDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAADPKAN 187
Query: 190 STGLPQ--GTTINVANLSGNVKGKACCSN 216
P G + V + + CCS+
Sbjct: 188 GAA-PSLAGKKVVVPGPAQEIPKSKCCSS 215
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/191 (70%), Positives = 154/191 (80%), Gaps = 3/191 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYD TK QTF N RWL+ELR+HAD NIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K D H+RA+ + AE LSF+ETSAL+A NVE AFQ IL +IY I+S KAL
Sbjct: 123 KIDQKHVRAIKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 EAASSTGLPQG 196
E +S P G
Sbjct: 180 ENGTSGQNPLG 190
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/209 (62%), Positives = 164/209 (78%), Gaps = 3/209 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWDTA 68
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GALLVYDIT+RQ+FD++ RWL ELR HAD NIVIM+ GNKSDL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKSDL 128
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA- 188
RAV+ EDA+ AEKE L FLETSAL+A NVE +FQT+L +I+ I SKK + ++ +
Sbjct: 129 EEQRAVSTEDAKEFAEKENLFFLETSALQATNVESSFQTVLTEIFKIHSKKNMVSEPKSN 188
Query: 189 -SSTGLPQGTTINVANLSGNVKGKACCSN 216
++ +P GT + V + + CCS+
Sbjct: 189 GAAPAMP-GTKVLVPGPAQEIPKSKCCSS 216
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/214 (62%), Positives = 164/214 (76%), Gaps = 5/214 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DY+FK+V+IGDS VGKS ILSRF +NEF L+SKSTIGVEF TRT+ ++ KT+K QI
Sbjct: 9 DQRIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNKTIKTQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQ+FD+V RWL ELR HAD+NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNNIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA- 184
K DL +RAV EDA+ A++EGL F ETSALEA+NVE AF T L +IY I+S+KAL A
Sbjct: 129 KCDLRDMRAVPEEDAKEFAQREGLFFFETSALEAINVETAFITALTEIYRIVSRKALTAN 188
Query: 185 -QEAASSTGLPQGTTINVANLSG---NVKGKACC 214
+E + GT I +++ VK ++CC
Sbjct: 189 EEERNGNAAALTGTKIALSSPEQPVMTVKKRSCC 222
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 166/213 (77%), Gaps = 3/213 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FKIVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF T+T+ V+ KTVKAQI
Sbjct: 9 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVVDHKTVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD+V +WL ELR+HAD+NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNNIVIMLVGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL LRAV EDA+ A+KE L F+ETSALEA NVE AF ++L +IY ++SKK+L A
Sbjct: 129 KSDLESLRAVPIEDAKEFAQKENLFFMETSALEATNVESAFISVLTEIYRVVSKKSLVAN 188
Query: 186 -EAASSTGLPQGTTINVANLSGNVKG--KACCS 215
E + L +G I + ++ +CCS
Sbjct: 189 DEYGGNNSLLKGNKIVIPGQEPEMQATNSSCCS 221
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 162/210 (77%), Gaps = 3/210 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDSGVGKS ILSR+ RNEF L+SK+TIGVEF TRTL ++ K+VKAQIWDTA
Sbjct: 14 DYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSVKAQIWDTA 73
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYD+T+RQTFD++ RWL ELR HAD NIVI++ GNKSDL
Sbjct: 74 GQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNIVIILVGNKSDL 133
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RA++ EDA+ AE EGL FLETSAL A+NVE AF T+L +I++I++KK L A E
Sbjct: 134 EDQRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTEIFNIVNKKNLVAGEGNG 193
Query: 190 STGLPQGTTINVANLSGNV---KGKACCSN 216
G G I++ V K CC++
Sbjct: 194 DPGSLAGKKIDIVPGPAQVVPTKSGMCCNS 223
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 164/218 (75%), Gaps = 8/218 (3%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
++ + +YDYLFK+ LIGDSGVGKSN+ RFTRNEF LESKSTIGVEFATR+L V+GK +
Sbjct: 3 GFRAEDDYDYLFKVGLIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNVDGKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK- 180
+ GNKSDL HL AV+ ED +LAE+E LSF+ETSALEA NV+ AF +L +++++
Sbjct: 123 LIGNKSDLRHLVAVSTEDGNLLAERESLSFMETSALEATNVDNAFAEVLSKSTALLARRL 182
Query: 181 ---ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ Q+A S + I+V+ VK CCS
Sbjct: 183 WKLVIIDQDAVPS----KSEKIDVSKDVSAVKKVGCCS 216
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/208 (62%), Positives = 158/208 (75%), Gaps = 1/208 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 67
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GALLVYDITKRQ+FD++ RWL ELR HAD NI+IM+ GNKSDL
Sbjct: 68 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIIIMLVGNKSDL 127
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV+ EDA+ AEKE L FLETSAL+A NVE AFQT+L +I+ I SKK + A+
Sbjct: 128 EDERAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLSEIFKIHSKKNIVTDPKAN 187
Query: 190 STGLP-QGTTINVANLSGNVKGKACCSN 216
P G + V + + CC +
Sbjct: 188 GAAPPLAGKKVLVPGPAQEIPKSKCCGS 215
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/191 (70%), Positives = 154/191 (80%), Gaps = 3/191 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQI 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYD TK QTF N RWL+ELR+HAD NIVIM+ GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K D H+RA+ + AE LSF+ETSAL+A NVE AFQ IL +IY I+S KAL
Sbjct: 123 KIDQKHVRAIKTDQGAEFAEARKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL--- 179
Query: 186 EAASSTGLPQG 196
E +S P G
Sbjct: 180 ENGNSGQNPLG 190
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 163/213 (76%), Gaps = 4/213 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ DY+FK+VLIGDS VGKS IL+RF+ NEF L+SKSTIGVEF TRTL ++ KTVKAQI
Sbjct: 11 NQRIDYVFKVVLIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 70
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR+HAD NIVI++ GN
Sbjct: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGN 130
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL + R V EDA+ AEKEGL FLETSAL+A NVE +F T+L +IY+I++KK LAA
Sbjct: 131 KSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNIVNKKNLAAD 190
Query: 186 EAA----SSTGLPQGTTINVANLSGNVKGKACC 214
E+ S++ L Q I K CC
Sbjct: 191 ESQGNGNSASLLGQKIIIPGPAQEIPAKSNMCC 223
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 162/202 (80%), Gaps = 2/202 (0%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GNKSDL HLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRA 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V ++A+ AEK LSF+ETSAL++ VE+AF+ IL +IY I+S+K +A + A +
Sbjct: 121 VPTDEARAFAEKNTLSFIETSALDSTKVEEAFKNILTEIYRIVSQKQIADRSAHDESPGN 180
Query: 195 QGTTINVANLSGNVKGK--ACC 214
I++ + + +G CC
Sbjct: 181 NVVDISLPPTTDSQRGDKLPCC 202
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/221 (64%), Positives = 164/221 (74%), Gaps = 20/221 (9%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ DY+FK+VLIGDS VGKS IL+RF RNEF L+SKSTIGVEF TRTL ++ KTVKAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR+HAD NIVI++ GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL + R V EDA+ AEKEGL FLETSALEA NVE AF T+L +IY+I++KK L A
Sbjct: 134 KCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 193
Query: 186 EAASSTGLPQGTTINVANLSGN---VKGKA---------CC 214
E QG N A+LSG V G A CC
Sbjct: 194 EN-------QGNG-NSASLSGQKIIVPGPAQEIPAKRNMCC 226
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/217 (62%), Positives = 168/217 (77%), Gaps = 3/217 (1%)
Query: 1 MAYKVDH--EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
M+ VD+ + DY+FKIVLIGDS VGKS L+RF RNEF +SK+TIGVEF T+TL ++
Sbjct: 1 MSNYVDYNQKIDYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDN 60
Query: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
KTVKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD +I
Sbjct: 61 KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHADKSI 120
Query: 119 VIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS 178
+IM+ GNK DL LRAV EDA+ A++E L F+ETSALEA NVE AF T+L +IY IIS
Sbjct: 121 IIMLIGNKCDLGSLRAVPTEDAEEFAQRENLFFMETSALEATNVETAFWTVLTEIYRIIS 180
Query: 179 KKALAAQEAAS-STGLPQGTTINVANLSGNVKGKACC 214
KK LA + + + G+ +GT I V + + N + K CC
Sbjct: 181 KKTLAGNDKSDGNPGVFKGTRILVPSQAQNSEKKGCC 217
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 139/220 (63%), Positives = 167/220 (75%), Gaps = 19/220 (8%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K++KAQI
Sbjct: 11 NQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSIKAQI 70
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD++ RWL ELR+HAD NIVI++ GN
Sbjct: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIGN 130
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL + R V EDA+ AEKEGL FLETSALEA NVE AF T+L +I++II+KK LAA
Sbjct: 131 KSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIINKKNLAAS 190
Query: 186 EAASSTGLPQGTTINVANLSGN---VKGKA--------CC 214
+ QG N A+LSG V G A CC
Sbjct: 191 DN-------QGND-NSASLSGKKIIVPGPAQEIPKRSMCC 222
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 161/208 (77%), Gaps = 1/208 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ ++VKAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWDTA 68
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GALLVYDIT+RQ+FD++ RWL ELR HAD NIVIM+ GNKSDL
Sbjct: 69 GQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKSDL 128
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV+ EDA+ AEKE L FLETSAL+A NVE AFQT+L +I+ I SKK + ++ ++
Sbjct: 129 EEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVSEPKSN 188
Query: 190 STGLPQ-GTTINVANLSGNVKGKACCSN 216
GT + V + + CCS+
Sbjct: 189 GVAPAMAGTKVLVPGPAQEIPKSKCCSS 216
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 165/214 (77%), Gaps = 15/214 (7%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYL+KIVLIGDSGVGKSN+LSRFTRNEF LE+KSTIGVEFATRT+Q EGKT+KAQ+WD
Sbjct: 9 EYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWD 68
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI K+ T+ +V RW+ ELR++AD NI IM+ GNKS
Sbjct: 69 TAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKS 128
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLR V+ ++A+ +EK L+F+ETSAL++ NVE AFQ IL IYHI+S+
Sbjct: 129 DLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSR-------P 181
Query: 188 ASSTGLPQGT------TINVANLSGNVKGKA-CC 214
+ STG PQ T TI + S K+ CC
Sbjct: 182 SHSTG-PQTTIDSNTETIILPTTSEPPAAKSGCC 214
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 165/212 (77%), Gaps = 6/212 (2%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+YDYLFK+VL+GDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT++++ K +KAQIWD
Sbjct: 7 DYDYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKIIKAQIWD 66
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYD+T + TF NV +WL ELRDHAD+NIVIM+ GNK
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELRDHADANIVIMLVGNKC 126
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK-KALAAQE 186
DL LR + A AQ A+ E L F+ETSAL+A NVE AF L ++Y+++SK +A+ A+E
Sbjct: 127 DLAQLRVIQAVKAQQFADTEDLIFIETSALDATNVETAFINALSNVYNVVSKNQAVNAEE 186
Query: 187 AASSTGLPQGTTINVANLSGNVKGKA-CCSNQ 217
T Q +I ++ + K+ CCS Q
Sbjct: 187 ----TSNKQNRSILISAAEDGFRPKSKCCSTQ 214
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 140/220 (63%), Positives = 167/220 (75%), Gaps = 19/220 (8%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQI
Sbjct: 11 NQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD++ RWL ELR+HAD NIVI++ GN
Sbjct: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIGN 130
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL + R V EDA+ AEKEGL FLETSALEA NVE AF T+L +I++I++KK LAA
Sbjct: 131 KSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIVNKKNLAA- 189
Query: 186 EAASSTGLPQGTTINVANLSGN---VKGKA--------CC 214
G QG N A+LSG V G A CC
Sbjct: 190 ------GDNQGNG-NAASLSGKQIIVPGTAQEIPKRSMCC 222
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 132/216 (61%), Positives = 165/216 (76%), Gaps = 9/216 (4%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ + +YDYLFK+VL GDSGVGKSN+LSRFTRN+F +S++TIGVEFATR++Q + K V
Sbjct: 3 AYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIV 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQE SAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIVIM
Sbjct: 63 KAQIWDTAGQE------SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 116
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK+DL HLRA++ E+A+ AE+E F+ETSALEA+NV+ AF +L IY ++SKKA
Sbjct: 117 LVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKA 176
Query: 182 LAAQEAASSTGLPQGTTINVANLS--GNVKGKACCS 215
L A + +T LP+G INV VK CCS
Sbjct: 177 LEAGD-DPTTALPKGQMINVGGRDDISAVKKPGCCS 211
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 163/217 (75%), Gaps = 20/217 (9%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SKSTIGVEF TRTL ++ KTVKAQIWDTA
Sbjct: 11 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR+HAD NIVI++ GNK DL
Sbjct: 71 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
+ R V EDA+ AEKEGL FLETSALEA NVE AF T+L +IY+I++KK L A E
Sbjct: 131 ENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADEN-- 188
Query: 190 STGLPQGTTINVANLSGN---VKGKA---------CC 214
QG N A+LSG V G A CC
Sbjct: 189 -----QGNG-NSASLSGQKIIVPGPAQEIPAKRNMCC 219
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/181 (70%), Positives = 153/181 (84%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M+ EYDYL+KIVLIGDSGVGKSN+LSRFTRNEF LE+KSTIGVEFATRT+Q EGKT
Sbjct: 1 MSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYDI K+ T+ +V RWL ELR++AD NI I
Sbjct: 61 IKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR V+ ++A+ +EK L+F+ETSAL++ NVE AFQ IL IYH++S+
Sbjct: 121 MLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHLMSRP 180
Query: 181 A 181
+
Sbjct: 181 S 181
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/213 (63%), Positives = 164/213 (76%), Gaps = 5/213 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+ DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 71
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR+HAD NIVI++ GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNK 131
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL RAV EDA+ A+KEGL FLETSAL+A NVE AF T+L +I++I++KK L A E
Sbjct: 132 SDLEDQRAVPTEDAKEFAQKEGLFFLETSALQATNVENAFMTVLTEIFNIVNKKNLVAGE 191
Query: 187 AASSTGLP---QGTTINVANLSGNVKGKA-CCS 215
G P G I + + + K+ CCS
Sbjct: 192 -DQINGNPASLSGKKIIIPGPAQEIPAKSKCCS 223
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 172/211 (81%), Gaps = 4/211 (1%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ + DY+FK+VLIGDS VGKS +L+RF+RNEF LESK+TIGVEF TRT+ V+ KT+KAQ
Sbjct: 7 MNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQ 66
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRAITSAYYRGAVGAL+VYDITKR TF++VTRWL EL+ HAD+NIV+M+ G
Sbjct: 67 IWDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVG 126
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDL +LRAV+ E+A+ LAE+E L F+ETSALEA NV+ AF ++L +IY I+SKK+L +
Sbjct: 127 NKSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSL-S 185
Query: 185 QEAASSTGLP-QGTTINVANLSGNVKGKACC 214
+ A S +P GTT+ ++ + G CC
Sbjct: 186 EGAGGSQQVPIPGTTLLLSEKKESKTG--CC 214
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 172/211 (81%), Gaps = 4/211 (1%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ + DY+FK+VLIGDS VGKS +L+RF+RNEF LESK+TIGVEF TRT+ V+ KT+KAQ
Sbjct: 7 MNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQ 66
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRAITSAYYRGAVGAL+VYDITKR TF++VTRWL EL+ HAD+NIV+M+ G
Sbjct: 67 IWDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVG 126
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDL +LRAV+ E+A+ LAE+E L F+ETSALEA NV+ AF ++L +IY I+SKK+L +
Sbjct: 127 NKSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSL-S 185
Query: 185 QEAASSTGLP-QGTTINVANLSGNVKGKACC 214
+ A S +P GTT+ ++ + G CC
Sbjct: 186 EGAGGSQQIPIPGTTLLLSEKKESKTG--CC 214
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 166/220 (75%), Gaps = 19/220 (8%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGKS IL+RF RN+F ++SK+TIGVEF TRTL +E K+VKAQI
Sbjct: 10 NQKIDYVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQI 69
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDITKR +FD++ RWL ELR+HAD NIVI++ GN
Sbjct: 70 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVIILIGN 129
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL RAV EDA+ AEKEGL FLETSAL+A NVE AF T+L +I++I++KK LAA
Sbjct: 130 KSDLEEQRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFNIVNKKNLAAD 189
Query: 186 EAASSTGLPQGTTINVANLSGN---VKGKA--------CC 214
E QG N A+LSG V G A CC
Sbjct: 190 EN-------QGNG-NSASLSGKKIIVPGPAQEIPKKSMCC 221
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 165/211 (78%), Gaps = 2/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGK+ +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ +WL ELR HAD NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA- 184
K DL LRAV EDAQ A++E L F+ETSALEA NVE AF TIL +IY IISKK+L A
Sbjct: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTAD 188
Query: 185 -QEAASSTGLPQGTTINVANLSGNVKGKACC 214
+A ++ L +GT I + + + K CC
Sbjct: 189 DDDADGNSSLLKGTRIIIPSEQESGKRGGCC 219
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/216 (61%), Positives = 167/216 (77%), Gaps = 7/216 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D YDYL+KIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++ EGK +KAQI
Sbjct: 5 DEHYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+KR +F+NV RWL+ELRDHAD NIV+++ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA- 184
KSDL +LR V E+A +E+EG++ +E SAL + NV++AF IL +IY + S++ L A
Sbjct: 125 KSDLRNLRTVTQEEACAFSEREGMACMEASALNSSNVDEAFHRILSEIYTLRSERQLTAN 184
Query: 185 QEAASSTGLP---QGTTINVANLSGNVKG---KACC 214
Q + LP QG ++ + N KG ++CC
Sbjct: 185 QHDLNKATLPLGTQGVRVDPIRIDLNSKGSKKRSCC 220
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 162/210 (77%), Gaps = 6/210 (2%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD++ RWL ELR HAD NIVI++ GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIGNKTDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV EDA+ AEKEGL FLETSALEA NVE AF T+L +I++I++KK L A E
Sbjct: 135 EEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNLVAGE-DQ 193
Query: 190 STGLP---QGTTINVANLSGNVKGKA--CC 214
+ G P G I + + + K+ CC
Sbjct: 194 ANGNPASLTGKRITIPGPAQEIPAKSNMCC 223
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 170/218 (77%), Gaps = 6/218 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-K 59
MA K D+ YDYLFKIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++Q++ K
Sbjct: 1 MAMKEDY-YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNK 59
Query: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIV 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ +F+N+ +WL+ELRD+ADSNIV
Sbjct: 60 IIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIV 119
Query: 120 IMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
I++ GNKSDL HLR + DA A+KE L+F+ETSALEA NVE AF +L +IY++ K
Sbjct: 120 ILLVGNKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQK 179
Query: 180 KALAAQEAASSTGLPQGTTINV--ANLSGNVKGK-ACC 214
K A + + + P+G INV N K K CC
Sbjct: 180 KQ-ATKNDDNLSIQPRGKKINVDDDNDKNETKKKNKCC 216
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFK+VLIGDSGVGKSN+LSRFTR+ F LESKSTIGVEFATR + ++GK +KAQIWD
Sbjct: 12 EYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWD 71
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGAL+VYD+ K Q+F N+T WL ELRDHA+ NIV+M+ GNK
Sbjct: 72 TAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKC 131
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLR V EDA+ A+++GLSF+ETSAL++ NVE+AF IL DIY+I+S
Sbjct: 132 DLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYNIVSSHP-PVNNV 190
Query: 188 ASSTGLPQGTTINVANLSGNVKGKACCS 215
L I N G+ CC+
Sbjct: 191 DMKMSLHNNQPIVSPNADNASGGRRCCN 218
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/166 (77%), Positives = 147/166 (88%)
Query: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
LIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERYRA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 77 ITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAVA 136
ITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GNKSDL HLRAV
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 123
Query: 137 AEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
++A+ AE+ GLSF+ETSAL++ NVE AFQ IL +IY I+S+K +
Sbjct: 124 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 169
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/197 (69%), Positives = 157/197 (79%), Gaps = 8/197 (4%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SKSTIGVEF TRTL ++ KTVKAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 75
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR+HAD NIVI++ GNK DL
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDL 135
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
R V EDA+ AEKEGL FLETSALEA NVE AF T+L +IY+I++KK L A E
Sbjct: 136 ESQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADE--- 192
Query: 190 STGLPQGTTINVANLSG 206
QG N A+LSG
Sbjct: 193 ----NQGNG-NSASLSG 204
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/177 (72%), Positives = 149/177 (84%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+L+RFTRNEF LESKSTIGVEFATR+++V K +KAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K+ T+ NV RWL ELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
KSDL HLRAV A++A AE LSF+ETSAL++ NVE AF+ IL +I+ +S + +
Sbjct: 125 KSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIHRKVSARQM 181
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 166/214 (77%), Gaps = 5/214 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGK+ +L+RF+RN+F ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD+NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL L+AV EDAQ A++E L F+ETSALE+ NVE AF TIL +IY +ISKK L A
Sbjct: 129 KCDLGTLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTAN 188
Query: 186 EAASS---TGLPQGTTINVANLSGNV--KGKACC 214
+ A +GL +GT I V N + K CC
Sbjct: 189 DEADPGGGSGLLKGTRIIVPNQDASAYEKKGGCC 222
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 134/202 (66%), Positives = 164/202 (81%), Gaps = 3/202 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-K 59
M+ K D+ YDYLFKIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++Q++ K
Sbjct: 1 MSMKEDY-YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNK 59
Query: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIV 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ +F+N+ +WL+ELRD+ADSNIV
Sbjct: 60 IIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIV 119
Query: 120 IMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
I++ GNKSDL HLR + +A A+KE L+F+ETSALEA NVE AF +L +IY++ K
Sbjct: 120 ILLVGNKSDLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQK 179
Query: 180 KALAAQEAASSTGLPQGTTINV 201
K E + S P+G INV
Sbjct: 180 KQGTKNEDSMSIQ-PRGKKINV 200
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 163/221 (73%), Gaps = 20/221 (9%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ DY+FK+VLIGDS VGKS IL+RF RNEF L+SKSTIGVEF TRTL ++ KTVKAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR+HAD NIVI++ GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL + R V DA+ AEKEGL FLETSALEA NVE AF T+L +IY+I++KK L A
Sbjct: 134 KCDLENQRDVPTGDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 193
Query: 186 EAASSTGLPQGTTINVANLSGN---VKGKA---------CC 214
E QG N A+LSG V G A CC
Sbjct: 194 EN-------QGNG-NSASLSGQKIIVPGPAQEIPAKRNMCC 226
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 155/208 (74%), Gaps = 1/208 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFK+VLIGDSGVGKSN+LSRFTR+ F LESKSTIGVEFATR + ++GK +KAQIWD
Sbjct: 12 EYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWD 71
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGAL+VYD+ K Q+F N+T WL ELRDHA+ NIV+M+ GNK
Sbjct: 72 TAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKC 131
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLR V EDA+ A+++GLSF+ETSAL++ NVE+AF IL DIY I+S
Sbjct: 132 DLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHP-PVNNI 190
Query: 188 ASSTGLPQGTTINVANLSGNVKGKACCS 215
L I N G+ CC+
Sbjct: 191 DMKMSLHNNQPIVSPNADNASGGRRCCN 218
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 160/214 (74%), Gaps = 3/214 (1%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+V + DY+FK+VLIGDS VGKS +L+ F RNEF L+SK+TIGVEF TRTL ++ +TVKA
Sbjct: 10 EVGQKIDYVFKVVLIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTLHIDARTVKA 69
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
Q DTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD+V RWL ELR HAD NIVIM+
Sbjct: 70 QTRDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLI 129
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNKSDL LR V EDA+ AE+E L F+ETSALE+ N+E AF T+L +IY I+SKK L
Sbjct: 130 GNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNLENAFMTVLTEIYRIVSKKNLV 189
Query: 184 AQEAASSTG---LPQGTTINVANLSGNVKGKACC 214
A E S+G L +GT I V KA C
Sbjct: 190 ANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASC 223
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 163/212 (76%), Gaps = 5/212 (2%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+R+ R+EF L+SK+TIGVEF TRTL ++ K+VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDIT+RQTFD++ RWL ELR HAD NIVI++ GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE--A 187
RA+ EDA+ AEKEGL FLETSA A NVE AF T+L +I++I++KK+LAA E
Sbjct: 135 VDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASEDQE 194
Query: 188 ASSTGLPQGTTINVANLSGNV---KGKACCSN 216
+ G G I++ G V K CC++
Sbjct: 195 NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 139/221 (62%), Positives = 163/221 (73%), Gaps = 15/221 (6%)
Query: 6 DHEYDYLFK----------IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ 55
+ EYD+LFK +VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++Q
Sbjct: 3 NDEYDFLFKGIYLPGPVLRMVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQ 62
Query: 56 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHAD 115
V+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD TK+QTF N RWL+ELR+HAD
Sbjct: 63 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHAD 122
Query: 116 SNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH 175
NIVIM+ GNK D H+R V DA A++ LSF+ETSAL+A NVE AFQ IL +IY
Sbjct: 123 KNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYR 182
Query: 176 IISKKALAAQEAASSTGLPQG--TTINVANLSGNVKGKACC 214
I+S KAL E SS+ P G I ++ + CC
Sbjct: 183 IVSSKAL---ENGSSSQNPLGDRKVIEISKTQDADAKQKCC 220
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 161/212 (75%), Gaps = 5/212 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+ DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 71
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR HAD NIVI++ GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGNK 131
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL RAV ED A+KEGL FLETSAL+A NVE AF T+L +I++I++KK L A E
Sbjct: 132 SDLEDQRAVPTEDVNEFAQKEGLFFLETSALQATNVESAFMTLLTEIFNIVNKKNLIAGE 191
Query: 187 AASSTGLP---QGTTINVANLSGNVKGKA-CC 214
S G P G I + + + K+ CC
Sbjct: 192 -NQSNGNPASLSGKKIIIPGPAQEIPSKSKCC 222
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 132/216 (61%), Positives = 167/216 (77%), Gaps = 7/216 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGK+ +L+RF +N+F ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 95 NQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQI 154
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FDN+ +WL ELR HAD NIV+M+ GN
Sbjct: 155 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGN 214
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL LRAV EDA+ A++E L F+ETSALE+ NVE AF TIL +IY +ISKK L A
Sbjct: 215 KCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTAN 274
Query: 186 EAASS---TGLPQGTTINVANL---SGNVKGK-ACC 214
+ A +GL +GT I V + +G KGK CC
Sbjct: 275 DDADPSGISGLLKGTKIIVPSQEINAGEKKGKGGCC 310
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/202 (66%), Positives = 164/202 (81%), Gaps = 3/202 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-K 59
M+ K D+ YDYLFKIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++Q++ K
Sbjct: 1 MSMKEDY-YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNK 59
Query: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIV 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ +F+N+ +WL+ELRD+ADSNIV
Sbjct: 60 IIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIV 119
Query: 120 IMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
I++ GNKSDL HLR + +A A+KE L+F+ETSALEA NVE AF +L +IY++ K
Sbjct: 120 ILLVGNKSDLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQK 179
Query: 180 KALAAQEAASSTGLPQGTTINV 201
K E + S P+G INV
Sbjct: 180 KQGTKNEDSMSIQ-PRGKKINV 200
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 163/212 (76%), Gaps = 5/212 (2%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+R+ R+EF L+SK+TIGVEF TRTL ++ K+VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDIT+RQTFD++ RWL ELR HAD NIVI++ GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE--A 187
RA+ EDA+ AEKEGL FLETSA A NVE AF T+L +I++I++KK+LAA E
Sbjct: 135 VDQRAIPTEDAREFAEKEGLFFLETSAFNATNVESAFSTVLSEIFNIVNKKSLAASEDQE 194
Query: 188 ASSTGLPQGTTINVANLSGNV---KGKACCSN 216
+ G G I++ G V K CC++
Sbjct: 195 NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/164 (75%), Positives = 142/164 (86%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ + +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+L V+ K +K
Sbjct: 5 YRAEDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDAKVLK 64
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+R TF+N RWLRELRDH D NIV+M+
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAERWLRELRDHTDPNIVVML 124
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAF 166
GNKSDL HL AV+ +D + AE+E L F+ETSALEA NVE AF
Sbjct: 125 IGNKSDLRHLVAVSTDDGKAFAERESLYFMETSALEATNVENAF 168
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 168/215 (78%), Gaps = 1/215 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M+Y+ + DYLFK+VLIGDS VGKSN+LSR+ RNEF SK+TIGVEF T++++++GK
Sbjct: 1 MSYQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKE 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQER+RA+TSAYYRGAVGAL+V+DIT+R TF+NV+RWL EL+ H+DS++V+
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAVGALIVFDITRRGTFENVSRWLDELKVHSDSSVVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL H+R V E+A LAE +SF+ETSALE++NV +AFQT+L +I+ I+SKK
Sbjct: 121 MLVGNKSDLAHIREVTVEEATALAENNAMSFMETSALESVNVAEAFQTVLKEIHKIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
AL A S+T + G + + + G CCS
Sbjct: 181 ALTADPNKSNTVVASGQRLAGGDDTTPRTG-GCCS 214
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 168/215 (78%), Gaps = 1/215 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M+Y+ + DYLFK+VLIGDS VGKSN+LSR+ RNEF SK+TIGVEF T++++++GK
Sbjct: 1 MSYQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKE 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIT+R TF+NV+RW EL+ H+D+N+V+
Sbjct: 61 LKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRGTFENVSRWFDELKVHSDANVVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL H+R V AE+A LAEK + F+ETSALEA+NV +AFQT+L +I+ I+SKK
Sbjct: 121 MLVGNKSDLAHIREVTAEEATALAEKNTMYFMETSALEAVNVVEAFQTVLKEIHKIVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
AL A +T + G + ++ + ACCS
Sbjct: 181 ALTADPNKGNTVVASGQRLAGSD-DTTPRTTACCS 214
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 162/221 (73%), Gaps = 19/221 (8%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+ DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRA+TSAYYRGAVGA+LVYDITKRQTFD++ RWL ELR HAD NIVI++ GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHADKNIVIILVGNK 131
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
DL R V EDA+ A+KEGL FLETSALE+ NVE AF T+L +I++I++KK LA
Sbjct: 132 CDLESQRVVPTEDAKEFAQKEGLFFLETSALESTNVETAFLTVLTEIFNIVNKKTLA--- 188
Query: 187 AASSTGLPQGTTINVANLSGN---VKGKA--------CCSN 216
G T N A+L G V G A CCS+
Sbjct: 189 -----GADNQTNGNPASLGGKKIVVPGPAQVIPEKSKCCSS 224
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 124/171 (72%), Positives = 147/171 (85%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLFK+VLIGDSGVGKSN+LSRFTR+ F LESKSTIGVEFATR + ++GK +KAQIWD
Sbjct: 23 EYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWD 82
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGAL+VYD+ K Q+F N+T WL ELRDHA+ NIV+M+ GNK
Sbjct: 83 TAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKC 142
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS 178
DL HLR V EDA+ A+++GLSF+ETSAL++ NVE+AF IL DIY I+S
Sbjct: 143 DLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVS 193
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 130/219 (59%), Positives = 160/219 (73%), Gaps = 8/219 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +YDYLFK+VLIGDSGVGKSNILSRFTR EF LES+STIGVEFAT+++++ K VKAQI
Sbjct: 9 EEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+KR +F+N RWL+ELR+HADS+IV+M+ GN
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL+HLRAV ++A+ L F+ETSALEA NVE+AFQ IL DIY + S K +
Sbjct: 129 KCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLR 188
Query: 186 EAASSTGLPQGTTINVANLSGNVKG--------KACCSN 216
A + + + L G G CC++
Sbjct: 189 AGADTPSIEEQQERMRVQLEGATSGGQQIQTHHSKCCAS 227
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 169/218 (77%), Gaps = 11/218 (5%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+ DH YDYL+KIVLIGDSGVGKS++LSRFTRNEF +ESKSTIGVEFATR++QVEGK +KA
Sbjct: 5 RYDH-YDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKA 63
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
Q+WDTAGQERYRAITSAYYRGAVGA+LVYD+TK++TF +V RWL E+R+HAD IV+M+
Sbjct: 64 QVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLV 123
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHI---ISKK 180
GNK DL HLRAVA++DA+ ++ GL+F+E SAL+A NVE+AFQ + ++H+ KK
Sbjct: 124 GNKCDLKHLRAVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQTITKLHHVQLAKMKK 183
Query: 181 ALAAQ---EAASSTGLPQGTTINVANLSGNVKGKACCS 215
L + E ++ Q N +L+ +GK CC+
Sbjct: 184 ELDGKDTREGQTAASKQQ----NSVDLNKPSQGKNCCT 217
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 152/185 (82%), Gaps = 10/185 (5%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+YDYLFK+VL+GDSGVGKSN+LSRFTRN F L+SKSTIGVEFATRT+QV+GKT+KAQIWD
Sbjct: 15 DYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWD 74
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADS-NIVIMMAGNK 126
TAGQERYRAITSAYYRGA GALLVYD+T+ TF++ RWLRELRDHAD +M+ GNK
Sbjct: 75 TAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNK 134
Query: 127 SDL---------NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHII 177
+DL +H RAV DA LAE+EGLSF+ETSAL+A NV+ AF+T+L +IY +
Sbjct: 135 TDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEIYRAV 194
Query: 178 SKKAL 182
S+KAL
Sbjct: 195 SRKAL 199
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 156/205 (76%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +YDYLFK+VLIGDSGVGKSNILSRFTR EF LES+STIGVEFAT+++++ K VKAQI
Sbjct: 9 EEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+KR +F+N RWL+ELR+HADS+IV+M+ GN
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL+HLRAV ++A+ L F+ETSALEA NVE+AFQ IL DIY + S K +
Sbjct: 129 KCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLR 188
Query: 186 EAASSTGLPQGTTINVANLSGNVKG 210
A + + + L G G
Sbjct: 189 AGADTPSIEEQQERMRVQLEGATSG 213
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 163/213 (76%), Gaps = 14/213 (6%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+K+QIWDTAGQERY
Sbjct: 19 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERY 78
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYD++K QT++NVTRWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 79 RAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 138
Query: 135 VAAEDAQILAEKE---------GLSFLETSALEALNVEKAFQTILLD----IYHIISKKA 181
V E+A+ A + LSF+ETSAL+A NVE AFQ IL D I+ I+S KA
Sbjct: 139 VPTEEAKQFAIPQLTLMVLGENNLSFIETSALDASNVELAFQNILTDLLAEIFRIVSSKA 198
Query: 182 LAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
L + + +S+ L + + + K + CC
Sbjct: 199 LESGD-SSANQLGDRKVVEITKTPDSEKKQGCC 230
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 156/202 (77%), Gaps = 5/202 (2%)
Query: 16 VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYR 75
VL S + KSN+LSRFTRNEF LESKSTIGVEFATR++Q EGK +KAQIWDTAGQERYR
Sbjct: 22 VLTVPSFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYR 81
Query: 76 AITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAV 135
AITSAYYRGAVGALLVYDITK+ +FDNV RWL+EL+DHAD+NIVIM+ GNKSDL HL+AV
Sbjct: 82 AITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAV 141
Query: 136 AAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLPQ 195
+DA AE GLSF+ETSAL+ NVE+AF++IL +IY + SKKAL ++ ++S P
Sbjct: 142 TTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKAL--EKGSTSNFAPN 199
Query: 196 GT---TINVANLSGNVKGKACC 214
T IN G + CC
Sbjct: 200 ATQTIVINPPADEGKTEKAKCC 221
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 165/214 (77%), Gaps = 5/214 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+H+ DY+FK+VL+GDS VGK+ +L+RF +N+F ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 9 NHKIDYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIIDKKTVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+R +FDN+ +WL ELR HAD NIV+M+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKNIVVMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL LRAV EDA+ A++E L F+ETSALE+ NVE AF TIL +IY ++SKK L A
Sbjct: 129 KCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLVSKKTLTAN 188
Query: 186 EAASS---TGLPQGTTINVA--NLSGNVKGKACC 214
+ A +GL +GT I V +++ K CC
Sbjct: 189 DDADPSGISGLLKGTKIIVPSQDINAGEKKGGCC 222
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b; AltName:
Full=Ras-related protein GB3; Short=AtGB3; AltName:
Full=Ras-related protein Rab11G; Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 161/209 (77%), Gaps = 2/209 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS +L+RF R+EF ++SK+TIGVEF TRTL +E K++KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYD+TKR+TF+++ RWL ELR HAD NIVI++ GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV EDA+ AEKEGL FLETSAL A NVE +F T++ IY+ ++KK LA++ ++
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 190 STGLPQGTTINVANLSGNVKGK--ACCSN 216
+ G G I + + K CC++
Sbjct: 195 NPGSLAGKKILIPGSGQEIPAKTSTCCTS 223
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 165/211 (78%), Gaps = 5/211 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++G+ VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++++V+RWL+EL++HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADTNIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV E+A+ A + L F E SAL + NV+ +F +L +IY +ISK L +
Sbjct: 130 SDLDHLRAVPTEEAKSFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTND 189
Query: 187 AASSTGLPQGTTINVANLSGNVKGK---ACC 214
+ P G TI++ KGK CC
Sbjct: 190 QGAQK--PSGPTISLTPAPQEKKGKNNSNCC 218
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 162/200 (81%), Gaps = 3/200 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-K 59
M+ K D+ YDYLFKIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++Q++ K
Sbjct: 1 MSMKEDY-YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNK 59
Query: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIV 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ +F+N+ +WL+ELRD+ADSNIV
Sbjct: 60 IIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIV 119
Query: 120 IMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
I++ GNKSDL HLR + +A A+KE L+F+ETSALEA NVE AF +L +IY++ K
Sbjct: 120 ILLVGNKSDLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQK 179
Query: 180 KALAAQEAASSTGLPQGTTI 199
K E + S P+G I
Sbjct: 180 KQGTKNEDSMSIQ-PRGKKI 198
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/181 (70%), Positives = 151/181 (83%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYDITKRQ+FD++ RWL ELR HAD NIVI++ GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIGNKTDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV EDA+ AEKEGL FLETSALEA NVE AF T+L +I++I++KK L+ S
Sbjct: 135 EEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNLSNMCCKS 194
Query: 190 S 190
S
Sbjct: 195 S 195
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 161/209 (77%), Gaps = 2/209 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS +L+RF R+EF ++SK+TIGVEF TRTL +E K++KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYD+TKR+TF+++ RWL ELR HAD NIVI++ GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV EDA+ AEKEGL FLETSAL A NVE +F T++ IY+ ++KK LA++ ++
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 190 STGLPQGTTINVANLSGNVKGK--ACCSN 216
+ G G I + + K CC++
Sbjct: 195 NPGSLAGKKILIPASGQEIPAKTSTCCTS 223
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 161/212 (75%), Gaps = 5/212 (2%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS +L+RF R+EF ++SK+TIGVEF TRTL +E K++KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYD+TKR+TF+++ RWL ELR HAD NIVI++ GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV EDA+ AEKEGL FLETSAL A NVE +F T++ +IY+ ++KK LA+ E
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTEIYNTVNKKNLASVENQG 194
Query: 190 STGLP---QGTTINVANLSGNVKGK--ACCSN 216
+ P G I + ++ K CCS+
Sbjct: 195 DSNNPGSLAGKKIVIPGSGQDIPAKTSTCCSS 226
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/160 (78%), Positives = 143/160 (89%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++ V+GKTVKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDGKTVKAQIWDTAGQERY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI+K T+ NVTRWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
V E+A+ + + LSF+ETSAL+A NVE AFQTIL D+Y
Sbjct: 121 VPTEEAKNFSTENELSFIETSALDASNVESAFQTILTDVY 160
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 159/209 (76%), Gaps = 2/209 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYD+LFK+V+IGDSGVGK+NIL RFTR+EF L+SKSTIGVEFATRT+ ++ K +KAQIWD
Sbjct: 4 EYDFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNKIIKAQIWD 63
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALL+YD+T Q++ N++RWL+EL+DHADSNIV+M+ GNK
Sbjct: 64 TAGQERYRAITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDHADSNIVLMLVGNKC 123
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV E+A+ A + L F+ETSAL+ +V AF+ IL +IYH +S
Sbjct: 124 DLKHLRAVPTEEAKQFASQNKLLFIETSALDGTDVALAFRNILTEIYHRVSAAENVHANL 183
Query: 188 ASSTGLPQGTTINVANLSGNV--KGKACC 214
S QGTTI++ G+ K +CC
Sbjct: 184 EDSRKPQQGTTISLTPQPGDSDKKSSSCC 212
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 166/211 (78%), Gaps = 3/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++++V+RWL+EL++HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV ++A+ A + L F E SAL + NV+ +F +L +IY +ISK L +
Sbjct: 130 SDLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTSD 189
Query: 187 AASSTGLPQGTTINVANLSGNVKGKA---CC 214
A++ G TI++ K K+ CC
Sbjct: 190 GANANKPSGGPTISLTPAPQEKKSKSSSNCC 220
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 163/216 (75%), Gaps = 4/216 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M+ D EYDYLFK+VL+GDSGVGKSN+LSRFTRN F LE+KSTIGVEFATR++ +EGK
Sbjct: 1 MSNPRDEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKK 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHAD-SNIV 119
+KA IWDTAGQERYRAIT AYYRGA+G L+VYDI K QTF N+ +WL+ELR+HAD SNI
Sbjct: 61 IKATIWDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNIS 120
Query: 120 IMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
IM+ GNK+DL HLRAV ++A I A++ +SF+ETSAL++ NVE+A + +L DIY +S
Sbjct: 121 IMLVGNKTDLRHLRAVPTQEAAIYADRNHMSFIETSALDSTNVEEALRNLLTDIYKTVST 180
Query: 180 KALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
K + GL GT + + +VK K CC+
Sbjct: 181 KYGVDSKPVPYGGL--GTIMTNVPSTEDVK-KKCCN 213
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 168/215 (78%), Gaps = 1/215 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY D DYLFK+VLIGDS VGKSN+LSR+ RNEF L SK+TIGVEF T+++++ GK
Sbjct: 1 MAYNDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIGGKE 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI++R TF+NV RWL ELR H+D+++V+
Sbjct: 61 IKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRGTFENVGRWLDELRVHSDASVVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK DL+++R V+ E+A +LA+ E +SF+ETSA++A NV AFQ+++ +IY ++SKK
Sbjct: 121 MLVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
LA+ + S + G++ +A + K CCS
Sbjct: 181 PLASSTSMKSNTVL-GSSQRLAGIDDTQPKKNCCS 214
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 161/209 (77%), Gaps = 2/209 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS +L+RF R+EF ++SK+TIGVEF TRTL +E K++KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYD+TKR+TF+++ RWL ELR HAD NIVI++ GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV EDA+ AEKEGL FLETSAL A NVE +F T++ IY+ ++KK LA++ ++
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASECDSN 194
Query: 190 STGLPQGTTINVANLSGNVKGK--ACCSN 216
+ G G I + + K CC++
Sbjct: 195 NPGSLAGKKILIPGSGQEIPAKTSTCCTS 223
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/202 (62%), Positives = 158/202 (78%), Gaps = 5/202 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D +YDYLFK+VL GDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT++++++G+T+KAQI
Sbjct: 10 DDKYDYLFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAIT+AYYRGAVGALLVYDITKR+TF+N+ WL ELR HA+ +IVIM+ GN
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDIVIMLVGN 129
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL HLR + EDA++ AE+ GL F+ETSALE+ VE AF +IL I+ +A+ +
Sbjct: 130 KCDLRHLRTILTEDAKLWAERHGLFFMETSALESTGVENAFYSILRTIF-----EAVRSH 184
Query: 186 EAASSTGLPQGTTINVANLSGN 207
AS+ + N +S N
Sbjct: 185 PPASNVDMKMSPYPNQPIVSPN 206
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 155/210 (73%), Gaps = 1/210 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EYDYLFKIVLIGDSGVGKSN+LSRFTR+ F LESKSTIGVEFATR + ++GK +KAQI
Sbjct: 10 EEEYDYLFKIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYD+ Q+F N+ WL+EL DHA+ NIV+M+ GN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALLVYDVCVLQSFRNLEIWLKELNDHAEKNIVVMLVGN 129
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL HLR+V EDA+ A+++GLSF+ETSAL++ NVE+AF IL +IY I+S
Sbjct: 130 KCDLRHLRSVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQNIYSIVSSHP-PVN 188
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCS 215
L I N G+ CC+
Sbjct: 189 NIDMKMSLHNNQPIVSPNADNASGGRRCCN 218
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 163/208 (78%), Gaps = 3/208 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGK+ +L+RF RNEF L+SK+TIGVEF T+TL ++ KT+KAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKTIKAQIWDTA 72
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ RWL ELR HAD NIVIM+ GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHADQNIVIMLIGNKCDL 132
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
LRAV EDA+ +A++E L F+ETSALE+ NVE F TIL +IY I +KK+L A + +
Sbjct: 133 GSLRAVPMEDAEEVAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTASDDDN 192
Query: 190 -STGLPQGTTINVANLSGNVKGK--ACC 214
+GL +G+ I V N + GK CC
Sbjct: 193 WGSGLLKGSRIIVPNQEIDNGGKKGGCC 220
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/200 (62%), Positives = 158/200 (79%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGK+ +L+RF +N+F ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 10 NQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQI 69
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FDN+ +WL ELR HAD NIV+M+ GN
Sbjct: 70 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGN 129
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL LRAV EDA+ A++E L F+ETSALE+ NVE AF TIL +IY +ISKK L A
Sbjct: 130 KCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTAN 189
Query: 186 EAASSTGLPQGTTINVANLS 205
+ A +G + + N N S
Sbjct: 190 DDADPSGYFRASEGNQDNCS 209
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 165/213 (77%), Gaps = 7/213 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++++V+RWL+ELR+HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELREHADANIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV E+A+ A + L F E SAL + NV+ +F +L +IY +ISK L +
Sbjct: 130 SDLDHLRAVPTEEAKSFATENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTND 189
Query: 187 AASSTGLPQGTTINVA-----NLSGNVKGKACC 214
S+ G TI++ SG K CC
Sbjct: 190 TVGSSKPSGGPTISLTPAPQEKRSG--KNSNCC 220
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 161/207 (77%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
E D+L KIVLIGDSGVGK+N+LSRF R++F +SKSTIGVEFAT+TL++EGKTVKAQIWD
Sbjct: 5 EPDFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGA+GALL+YDIT TF++++RWL+ELR++ADSNIV+M+ GNKS
Sbjct: 65 TAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL LRAV+ ED +++E L F+ETSA A NV++AF T++ +I H +SK+ + + ++
Sbjct: 125 DLQELRAVSTEDGTGFSQQENLLFIETSARNATNVQEAFTTLITEIVHRLSKQNIVSPDS 184
Query: 188 ASSTGLPQGTTINVANLSGNVKGKACC 214
+ G +G TI K CC
Sbjct: 185 PAKVGPNKGVTITSTTADDKKKKNTCC 211
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 163/211 (77%), Gaps = 3/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI K +T+++V+RWL+EL++HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTETYESVSRWLKELKEHADANIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV E+A+ A + L F E SAL + NV+ +F +L +IY +ISK L +
Sbjct: 130 SDLDHLRAVPTEEARNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTND 189
Query: 187 AASSTGLPQGTTINVANLSGNVKGK---ACC 214
S+ G TI++ + K CC
Sbjct: 190 GGSNKPTTGGPTISLTPAPQEKRSKNNSNCC 220
>gi|342885037|gb|EGU85147.1| hypothetical protein FOXB_04325 [Fusarium oxysporum Fo5176]
Length = 197
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 129/191 (67%), Positives = 158/191 (82%), Gaps = 3/191 (1%)
Query: 26 SNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGA 85
SN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWDTAGQERYRAITSAYYRGA
Sbjct: 8 SNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGA 67
Query: 86 VGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAE 145
VGALLVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKSDL HLRAV E+A+ A
Sbjct: 68 VGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTEEAKSFAS 127
Query: 146 KEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLPQGTTINVANLS 205
+ LSF+ETSAL+A NVE AFQ IL +IY I+S KAL + ++A +T + GT I+++ +
Sbjct: 128 ENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQAT-IGAGTNISLSKPA 186
Query: 206 GN--VKGKACC 214
+ KG CC
Sbjct: 187 DDDAAKGGKCC 197
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 164/211 (77%), Gaps = 3/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++++V+RWL+EL++HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDISKAESYESVSRWLKELKEHADANIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV ++A+ A + L F E SAL + NV+ +F +L +IY +ISK L E
Sbjct: 130 SDLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNE 189
Query: 187 AASSTGLPQGTTINVANLSGNVKGK---ACC 214
++ G TI++ K K CC
Sbjct: 190 GSNGNKPSGGPTISLTPAPQEKKSKNNSNCC 220
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 162/214 (75%), Gaps = 9/214 (4%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFAT++++++G+T+KAQI
Sbjct: 10 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAIT+AYYRGAVGALLVYDITKR+TF+N+ WL ELR++ + ++V+M+ GN
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRNNVELDMVVMLVGN 129
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL HLR V EDA++ AE+ GL F+ETSALE+ VE AF IL I+ +A+ +
Sbjct: 130 KCDLRHLRTVQTEDAKLWAERHGLFFMETSALESTGVENAFYYILKTIF-----EAVRSH 184
Query: 186 EAASSTGLPQGTTINVANLSGNV----KGKACCS 215
S+ + N +S N G+ CCS
Sbjct: 185 PPVSNVDMKMSPYNNQPIVSPNTDSSKSGRRCCS 218
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 168/218 (77%), Gaps = 4/218 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE-GK 59
M + + E+DYLFKIVL+GDSGVGKSN+L RFTRNEF L+SKSTIGVEFAT+T+ +E GK
Sbjct: 1 MTSEKEEEHDYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGK 60
Query: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIV 119
VKAQIWDTAGQERY+AIT+AYYRGA GALLVYDIT+R + +N+ RWLRELR+H D+ +V
Sbjct: 61 VVKAQIWDTAGQERYKAITAAYYRGAFGALLVYDITQRASLENIPRWLRELREHVDNQMV 120
Query: 120 IMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
+M+ GNK DL HLR V E + LAE+EGL FLETSAL++ NVE+AF ++ +IY ++ K
Sbjct: 121 VMLVGNKCDLRHLRQVEIEQGKKLAEEEGLLFLETSALDSTNVEEAFTQLIREIYRLMKK 180
Query: 180 KALAAQEAASSTGLPQGTTINVAN--LSGNVKGKACCS 215
KAL E+ S L Q T+ + + + + K K CC+
Sbjct: 181 KAL-VNESTQSFALKQDNTVVIRDPSAAKSSKKKKCCT 217
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 125/160 (78%), Positives = 142/160 (88%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++ V+ KTVKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI+K T+ NVTRWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
V E+A+ + + LSF+ETSAL+A NVE AFQTIL D+Y
Sbjct: 121 VPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVY 160
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 164/211 (77%), Gaps = 5/211 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGD GVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++G+ VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI K +++++V+RWL+EL++HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDILKTESYESVSRWLKELKEHADTNIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV E+A++ A + L F E SAL + NV+ +F +L +IY +ISK L +
Sbjct: 130 SDLDHLRAVPTEEAKLFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTND 189
Query: 187 AASSTGLPQGTTINVANLSGNVKGK---ACC 214
+ P G TI++ KGK CC
Sbjct: 190 QGAQK--PSGPTISLTPAPQEKKGKNNSNCC 218
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 162/213 (76%), Gaps = 5/213 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI K +++++V+RWL+EL++HADSNIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSNIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV E+A+ A++ L F+E SAL + NV+ +F +L +IY +ISK L E
Sbjct: 130 SDLDHLRAVPTEEAKNFAQENNLLFIEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNE 189
Query: 187 -----AASSTGLPQGTTINVANLSGNVKGKACC 214
++ G P + N CC
Sbjct: 190 QGGVNKPTTAGGPTISLTPAPQSKKNKNNGGCC 222
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 168/215 (78%), Gaps = 1/215 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MAY D DYLFK+VLIGDS VGKSN+LSR+ RNEF L SK+TIGVEF T++++++GK
Sbjct: 1 MAYNDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIDGKE 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI+++ TFDNV RWL ELR H+D+++V+
Sbjct: 61 IKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRKGTFDNVGRWLDELRVHSDASVVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK DL+++R V+ E+A +LA+ E +SF+ETSA++A NV AFQ+++ +IY ++SKK
Sbjct: 121 MLVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
L + + S + G++ +A + + CCS
Sbjct: 181 PLTSSVSMKSNTVL-GSSQRLAGIDDIQPKRNCCS 214
>gi|58267306|ref|XP_570809.1| ras-related protein ypt3 (rab) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227043|gb|AAW43502.1| ras-related protein ypt3 (rab), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 205
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/192 (68%), Positives = 153/192 (79%), Gaps = 7/192 (3%)
Query: 27 NILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAV 86
N+LSRFTRNEF LESKSTIGVEFATR++ V+GKTVKAQIWDTAGQERYRAITSAYYRGAV
Sbjct: 17 NLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRAITSAYYRGAV 76
Query: 87 GALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEK 146
GALLVYDI K QT++NVTRWL+ELRDHAD+NIVIM+ GNKSDL HLRAV+ ++A+ A +
Sbjct: 77 GALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVSTDEAKQFATE 136
Query: 147 EGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLPQ-GTTINVANLS 205
GLSF+ETSAL+A NVE AFQ IL DIY I+S K+L E++ P G TI VA +
Sbjct: 137 NGLSFIETSALDASNVESAFQNILTDIYRIVSSKSL---ESSGDVIKPSGGETILVAPTA 193
Query: 206 ---GNVKGKACC 214
G G CC
Sbjct: 194 DDGGAKSGSKCC 205
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 164/210 (78%), Gaps = 6/210 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
+DYLFK V++GDSGVGK+N+LSRFTRNEF ++SKSTIGV+FAT+ + V+ K VKAQ+WDT
Sbjct: 7 HDYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNKVVKAQLWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQ+RYRAIT+AYYRGAVGALLVYDIT+R T+DN+ RWL+ELRD AD+N VIM+ GNKSD
Sbjct: 67 AGQDRYRAITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELRDFADTNAVIMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE-- 186
L H+RAV+ E+A + + GLSFLETSAL++ NV++AF T++ DI+ I+S + L E
Sbjct: 127 LKHIRAVSTEEAAAFSAEHGLSFLETSALDSSNVDEAFNTVVNDIFKIVSAQQLERSENE 186
Query: 187 -AASSTGLPQGTTINVANLSGNVKGKACCS 215
+A G P I+ + + KG CCS
Sbjct: 187 VSAPGAGAP--IKIDNSTETQTTKG-GCCS 213
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGK+ +L+RF RNEF ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER A+TSAYYRGAVGA+LVYD+TKRQ+FD++ +WL ELR HAD NIVIM+ GN
Sbjct: 69 WDTAGQER--AVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGN 126
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA- 184
K DL LRAV EDAQ A++E L F+ETSALEA NVE AF TIL +IY IISKK+L A
Sbjct: 127 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTAD 186
Query: 185 -QEAASSTGLPQGTTINVANLSGNVKGKACC 214
+A ++ L +GT I + + + K CC
Sbjct: 187 DDDADGNSSLLKGTRIIIPSEQESGKRGGCC 217
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 163/212 (76%), Gaps = 4/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGK+ +L+RF RNEF L+SK+TIGVEF T+TL ++ K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKIIKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ +WL ELR HAD NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHADQNIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-AA 184
K DL LRAV EDA+ LA++E L F+ETSALE+ NVE F TIL +IY I +KK+L +
Sbjct: 129 KCDLGSLRAVPMEDAEELAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTTS 188
Query: 185 QEAASSTGLPQGTTINVAN---LSGNVKGKAC 213
+ +GL +G+ I V N +G KG C
Sbjct: 189 DDDIGGSGLLKGSRIIVPNQEIYNGGKKGGCC 220
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/156 (78%), Positives = 141/156 (90%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
V ++A+ AEK LSF+ETSAL++ NVE+AF+ IL
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 156
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/173 (72%), Positives = 150/173 (86%), Gaps = 1/173 (0%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-KTVKAQIWD 67
YDYLFKIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++Q++ K +KAQIWD
Sbjct: 4 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 63
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDITK+ +F+N+ +WL+ELRD+ADSNIVI++ GNKS
Sbjct: 64 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 123
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
DL HLR + DA A+KE L+F+ETSALEA NVE AF +L +IY++ KK
Sbjct: 124 DLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK 176
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 156/213 (73%), Gaps = 2/213 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ A +T ++A + F +IY I+S+K +A +
Sbjct: 125 KSDLRHLRAVPTDEARAFAGNNHPKKTKTPYVQAFGISALFSFSYTEIYRIVSQKQIAER 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKA--CCSN 216
A + I+V + +G CC N
Sbjct: 185 SANDESPGNNVVDISVPPTTDGQRGSKLQCCQN 217
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/156 (78%), Positives = 141/156 (90%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERY
Sbjct: 57 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 116
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GNKSDL HLRA
Sbjct: 117 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 176
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
V ++A+ AEK LSF+ETSAL++ NVE+AF+ IL
Sbjct: 177 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 212
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 162/211 (76%), Gaps = 3/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT NEF +ESKSTIGVEFATRT++VEGK +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV ++A+ A++ L F ETSAL + NV++AF+ ++ IY ++SK + E
Sbjct: 128 SDLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLNE 187
Query: 187 AASSTG-LPQGTTINV--ANLSGNVKGKACC 214
++ G P+G TI++ A N K CC
Sbjct: 188 YGNNAGQAPKGPTISLTPAPAKKNKKSDNCC 218
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 165/211 (78%), Gaps = 4/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF L+S+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++++V+RWL+EL++HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV ++A+ A + L F E SAL + NV+ +F +L +IY +ISK L +
Sbjct: 130 SDLDHLRAVPTDEAKNFANENSLLFTEASALNSDNVDLSFHQLLKNIYEMISKHQLETDD 189
Query: 187 AASSTGLPQGTTINVANLSGNVKGK---ACC 214
S+ G TI++ + K K CC
Sbjct: 190 QPSAKP-SSGATISLTPVPQEKKSKNNANCC 219
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 120/152 (78%), Positives = 135/152 (88%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSAL 157
KSDL HLRAV ++A+ AEK LSF+ +L
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIRDLSL 156
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 120/187 (64%), Positives = 153/187 (81%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DY+FK+VLIGDS VGK+ +L+RF+RN+F ++SK+TIGVEF T+TL ++ KTVKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDSKTVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD++ +WL ELR HAD+NIVIM+ GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTNIVIMLIGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL L+AV EDAQ A++E L F+ETSALE+ NVE AF TIL +IY +I KK L A
Sbjct: 129 KCDLATLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLIGKKTLTAN 188
Query: 186 EAASSTG 192
+ +G
Sbjct: 189 DDTDPSG 195
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 160/212 (75%), Gaps = 4/212 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI K +++++V+RWL+EL++HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV E+A+ A + L F E SAL + NV+ +F +L +IY +ISK L E
Sbjct: 130 SDLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNE 189
Query: 187 AASSTGLPQGTTINVANLSGNVKGKA----CC 214
G TI++ K CC
Sbjct: 190 QGGLKAPSNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 122/169 (72%), Positives = 145/169 (85%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +YDYLFK+VLIGDSGVGKSNILSRFTR EF LES+STIGVEFAT+++++ K VKAQI
Sbjct: 9 EEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+KR +F+N RWL+ELR+HADS+IV+M+ GN
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
K DL+HLRAV ++A+ L F+ETSALEA NVE+AFQ IL DIY
Sbjct: 129 KCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIY 177
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 160/212 (75%), Gaps = 4/212 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI K +++++V+RWL+EL++HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV E+A+ A + L F E SAL + NV+ +F +L +IY +ISK L E
Sbjct: 130 SDLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNE 189
Query: 187 AASSTGLPQGTTINVANLSGNVKGKA----CC 214
G TI++ K CC
Sbjct: 190 QGGLKAASNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 161/210 (76%), Gaps = 5/210 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-KTVKAQIWD 67
+ + + +VLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++Q++ K +KAQIWD
Sbjct: 1 FSFFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWD 60
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDITK+ TF+N+ +WL+ELRD+ADSNIVI++ GNKS
Sbjct: 61 TAGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKS 120
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLR + DA A+KE L+F+ETSALEA NVE AF +L +IY++ KK E
Sbjct: 121 DLKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSED 180
Query: 188 ASSTGLPQGTTINVANLSGNVKGKA---CC 214
+ P+G INV N + + K CC
Sbjct: 181 NVNIQ-PRGKKINVDNDNDEDEKKTKTKCC 209
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI K +++++V+RWL+EL++HAD+NI+I + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV E+A+ A + L F E SAL + NV+ +F +L +IY +ISK L +
Sbjct: 130 SDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENND 189
Query: 187 AASSTGLPQGTTINVANLSGNVKGK---ACC 214
+ T G TI++ K K CC
Sbjct: 190 -SKQTNTAGGPTISLTPAPQEKKNKNNGGCC 219
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 162/211 (76%), Gaps = 3/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT N+F +ESKSTIGVEFATRT++VEGK +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV ++A+ A++ L F ETSAL++ NV+ AF+ ++ IY ++SK + +
Sbjct: 128 SDLDHLRAVPTDEAKNFAQENQLLFTETSALKSENVDLAFRELITAIYQMVSKHQVDLGD 187
Query: 187 AASSTGLPQGTTINVANLSGNVKGKA---CC 214
A + P+G TI++ K K+ CC
Sbjct: 188 ANTQGNAPKGPTISLTPAPNENKKKSANNCC 218
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/187 (67%), Positives = 150/187 (80%), Gaps = 1/187 (0%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
+D EYDYLFK+VLIGDSGVGKSN+LSRFT NEF LESKSTIGVEFAT+ L+++ TVKAQ
Sbjct: 1 MDDEYDYLFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDT+GQERYRAIT AYYRGAVGALLVYDIT++ +F NV WL+ELRDHAD NIVIM+ G
Sbjct: 61 IWDTSGQERYRAITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADPNIVIMLVG 120
Query: 125 NKSDLNH-LRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
NK DL+ R V ED LAE+EG F+ETSAL+A NV+KAF T+ IY + KK
Sbjct: 121 NKVDLSESSRQVTTEDGGSLAEQEGFLFVETSALDATNVDKAFATVFDTIYSNLPKKTNQ 180
Query: 184 AQEAASS 190
+ +AA++
Sbjct: 181 SADAATN 187
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/182 (70%), Positives = 146/182 (80%), Gaps = 3/182 (1%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+GKT+KAQIWDTAGQERY
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 70
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYD TK QTF N RWL+ELR+HAD NIVIM+ GNK D H+RA
Sbjct: 71 RAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRA 130
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
+ + AE LSF+ETSAL+A NVE AFQ IL +IY I+S KAL E +S P
Sbjct: 131 IKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL---ENGTSGQNP 187
Query: 195 QG 196
G
Sbjct: 188 LG 189
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 119/176 (67%), Positives = 148/176 (84%), Gaps = 1/176 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRN+F LE+KSTIGVEFATR++ +EGK +KA I
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHAD-SNIVIMMAG 124
WDTAGQERYRAITSAYYRG +GAL+VYDI K QTF+N+ RWL+ELR+HAD +I IM+ G
Sbjct: 66 WDTAGQERYRAITSAYYRGTLGALVVYDIAKHQTFENIERWLKELRNHADQQDISIMLVG 125
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
NK+DL HLRAV ++A + AE+ +SF+ETSAL++ NVE+A + +L IY +S K
Sbjct: 126 NKTDLRHLRAVPTDEAAVFAERNQMSFIETSALDSTNVEEALRNLLTAIYKSVSTK 181
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 162/213 (76%), Gaps = 5/213 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT NEF LESKSTIGVEFATRT++VE K +KAQIW
Sbjct: 9 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVEDKKIKAQIW 68
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K T++N WL EL+++AD N+ I + GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLTELKENADDNVAIGLIGNK 128
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-AAQ 185
SDL HLRAV E+A+ A + L F ETSAL + NV+ AF+ ++ IY +++K + +
Sbjct: 129 SDLEHLRAVPTEEARGFASENQLFFTETSALNSENVDLAFRELIEQIYKMVNKHQVDLGE 188
Query: 186 EAASSTGLPQGTTINVANLSGN----VKGKACC 214
A S+G P+G TI++A + G K +CC
Sbjct: 189 NAKGSSGAPKGPTISLAPVPGEKKKKSKSNSCC 221
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YLFKIVLIGDSGVGKSN+LSRFTRNEF LES+STIGVEFATRT++++GK VKAQIW
Sbjct: 9 YDYEYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVKAQIW 68
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGALLVYDI+K ++++NV++WL+EL+++AD NIVI + GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDISKSESYENVSKWLKELKENADENIVIELVGNK 128
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV ++A+ + + L F E SAL A NV+ +FQ +L I+ ++SK +
Sbjct: 129 SDLDHLRAVPTDEAKQFSVENQLLFTEASALNAENVDLSFQQLLKSIHDMVSKHQFDMTD 188
Query: 187 AASSTGLPQGTTINVANLSGNVKGK---ACC 214
S G TI++ GN + K CC
Sbjct: 189 -YSGPKPSGGPTISLTPTPGNEQSKNKSNCC 218
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/220 (57%), Positives = 164/220 (74%), Gaps = 4/220 (1%)
Query: 1 MAYKVDHEY--DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
MAY D E DYLFKIVL+GDS VGKSN+L+RF RNEF SKSTIGVEF T+ L ++G
Sbjct: 1 MAYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDG 60
Query: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD+V RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNV 120
Query: 119 VIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS 178
V ++ GNK+DL H R V+ + + LAE +GL F+ETSAL++ NV +AFQT++ +IY I+S
Sbjct: 121 VTILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILS 180
Query: 179 KKALAAQEAA-SSTGLPQGTTINVANLSGNVK-GKACCSN 216
+K +QE S L G + +++ + G+ CCS+
Sbjct: 181 RKVFQSQEQKRSEQSLSNGKPVMLSDSNEPTSGGRWCCSS 220
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/199 (64%), Positives = 156/199 (78%), Gaps = 3/199 (1%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+YDYL+KIVLIGDSGVGKSN+LSRFTRNEF LE+KSTIGVEFATRT+ EGKT+KAQIWD
Sbjct: 10 DYDYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKAQIWD 69
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSN--IVIMMAGN 125
TAGQERYRAITSAYYRGAVGALLVYDI K+ T+ +V RWL ELR++AD N I IM+ GN
Sbjct: 70 TAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNFDIEIMLVGN 129
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLR V+ ++A+ AEK L F+ETSAL++ NV+ AFQTIL I H +S+
Sbjct: 130 KSDLRHLREVSTDEAKEFAEKHKLLFIETSALDSSNVDVAFQTILTQICHSMSRPTPIGA 189
Query: 186 EAASSTGLPQ-GTTINVAN 203
+ P GT +++++
Sbjct: 190 PSGHDDNSPSIGTPVDISS 208
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/171 (73%), Positives = 148/171 (86%), Gaps = 2/171 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-K 59
M+ K D+ YDYLFKIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++Q++ K
Sbjct: 1 MSMKEDY-YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDK 59
Query: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIV 119
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ TF+N+ +WL+ELRD+ADSNIV
Sbjct: 60 IIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIV 119
Query: 120 IMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
I++ GNKSDL HLR + DA A+KE L+F+ETSALEA NVE AF +L
Sbjct: 120 ILLVGNKSDLKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLL 170
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI K +++++V+RWL+EL++HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV ++A+ A + L F E SAL + NV+ +F +L +IY +ISK L
Sbjct: 130 SDLDHLRAVPTDEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL-ENN 188
Query: 187 AASSTGLPQGTTINVANLSGNVKGKA---CC 214
A S+ G TI++ K+ CC
Sbjct: 189 ADSNKQSTSGPTISLTPAPKEKNSKSNSNCC 219
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 143/172 (83%), Gaps = 5/172 (2%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+YDYLFK+VL+GDSGVGKSN+LSRFTRN F L+SKSTIGVEFATRT+QV+GKT+KAQIWD
Sbjct: 16 DYDYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQVDGKTIKAQIWD 75
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADS-NIVIMMAGNK 126
TAGQERYRA+TSAYYRGAVGALLVYD+TK TF N RWLRELRDHAD +M+ GNK
Sbjct: 76 TAGQERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRDHADGRGTAVMLVGNK 135
Query: 127 SDL----NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
+DL LRAV D LAE+EGLSF+ETSAL+A NV+ AF T+L +IY
Sbjct: 136 TDLAKQRGGLRAVPRGDGAALAEREGLSFVETSALDATNVDAAFVTLLTEIY 187
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 160/216 (74%), Gaps = 8/216 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YD LFKIVLIGDSGVGKSN+LSRFT+NEF ++SKSTIGVEFATRTL++EGK +KAQIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL---- 182
SDL HLRAV E+++ A++ L F ETSAL + NV+KAF+ ++ IY +SK +
Sbjct: 128 SDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGD 187
Query: 183 -AAQEAASSTGLPQGTTINV---ANLSGNVKGKACC 214
+A A+ P G TI++ N + G CC
Sbjct: 188 SSANGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 160/212 (75%), Gaps = 4/212 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGA+GAL+VYDI K +++++V+RWL+EL++HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGALGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV ++A+ A + L F E SAL + NV+ +F +L +IY +ISK L E
Sbjct: 130 SDLDHLRAVPTDEARNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNE 189
Query: 187 AASSTGLPQGTTINVANLSG----NVKGKACC 214
G TI++ N CC
Sbjct: 190 QGGLKAATNGPTISLTPAPKERNRNKNNGGCC 221
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 157/212 (74%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D ++DY+FKIVLIGDSGVGKSN+LSRFT++EF + K+TIGVEFATR++ + K +KAQI
Sbjct: 5 DQDHDYIFKIVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADNKLIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERY AITSAYYRGAVGALL+YDITK +F N+ +WL E+RDHA+ +IV+M+ GN
Sbjct: 65 WDTAGQERYVAITSAYYRGAVGALLIYDITKHSSFINIQKWLDEIRDHAEPHIVVMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLR V EDA AEK ++F+ETSAL+A NVE FQ I+ +IY +++K+++ +
Sbjct: 125 KSDLKHLRQVRQEDATAFAEKNNIAFIETSALDASNVELTFQRIITEIYQLLNKRSMVPE 184
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSNQ 217
S +G ++ L + SNQ
Sbjct: 185 NNESQVSNKKGESLKSNKLQTKMNQSRGVSNQ 216
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 120/173 (69%), Positives = 144/173 (83%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + + DY+FK+VLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ +T
Sbjct: 4 MHGEFNQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAIDKRT 63
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TKRQ+FD+V RWL ELR HAD NIVI
Sbjct: 64 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLNELRGHADKNIVI 123
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDI 173
M+ GNKSDL LRAV EDA+ AE+E L F+ETS LE+ NVE AFQT+L +I
Sbjct: 124 MLIGNKSDLGTLRAVPTEDAKEFAERENLFFMETSVLESXNVESAFQTVLTEI 176
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 161/216 (74%), Gaps = 2/216 (0%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATRTL V+ K +
Sbjct: 3 GYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVI 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWL-RELRDHADSNIVI 120
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV + R + H + +
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHGTFENVRQMAERTAKPHRFQHCCV 122
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
++ GNK+DL HL AV+ ED + AEKE L F+ETSALEA NVE +F +L IY I+SKK
Sbjct: 123 LV-GNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRILSKK 181
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
A+ E +++ +G I++ N +K CCS+
Sbjct: 182 AVEGAENGNASVPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YL+KIVLIGDSGVGKSN+LSRFTR+EF LES+STIGVEFATRTL+++GK VKAQIW
Sbjct: 10 YDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI K +++++V+RWL+EL++HAD+NI+I + GNK
Sbjct: 70 DTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+HLRAV E+A+ A + L F E SAL + NV+ +F +L +IY +ISK L +
Sbjct: 130 SDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENND 189
Query: 187 AASSTGLPQGTTINVANLSGNVKGK 211
+ T G TI++ K K
Sbjct: 190 -SKQTNTAGGPTISLTPAPQEKKNK 213
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 160/212 (75%), Gaps = 4/212 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT NEF +ESKSTIGVEFATRT++VEGK +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K T++N WL+ELRD+AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLKELRDNADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV +A+ A + L F ETSAL + NV++AF+ ++ IY ++SK + +
Sbjct: 128 SDLAHLRAVPTAEAKNFASENELLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGD 187
Query: 187 AA-SSTGLPQGTTINVANLSGNVKGKA---CC 214
+ ++ P+G TI++ K + CC
Sbjct: 188 SGNNAAAAPKGPTISLTPTPNENKKSSSSNCC 219
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 125/184 (67%), Positives = 147/184 (79%), Gaps = 15/184 (8%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+YDYLFKIVLIGDSGVGKSNILSRFTRNEF +ESKSTIGVEFATR++++E K VKAQIWD
Sbjct: 7 DYDYLFKIVLIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEIEKKVVKAQIWD 66
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKR---------------QTFDNVTRWLRELRD 112
TAGQERYRAITSAYYRGAVGALLVYD+TK+ +TF +V +WL ELRD
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDVTKKGTAITKEIKLISYSLETFADVEKWLAELRD 126
Query: 113 HADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLD 172
HADS IVIM+ GNK DL HLR+V +DA+I A KE L FLETSAL ++N++ AFQ +L
Sbjct: 127 HADSKIVIMLTGNKCDLQHLRSVTTQDAEIYAAKEDLLFLETSALNSVNIDAAFQKVLSV 186
Query: 173 IYHI 176
I+ +
Sbjct: 187 IHEV 190
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 159/210 (75%), Gaps = 2/210 (0%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT +EF + SKSTIGVEFATRT++VEGK VKAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLAELRENADENVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV ++A+ A++ + F ETSAL A NV+ AF+ ++ IY ++SK + E
Sbjct: 128 SDLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSE 187
Query: 187 AASSTGLPQGTTINVANLSGNVKGKA--CC 214
+ +P+G TI++ S K+ CC
Sbjct: 188 KSGGGTMPRGPTISLTPASNEKTKKSNNCC 217
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 158/214 (73%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA K + EYD+LFKIVLIGDSGVGK+N+LSRFT+NEF ++SK TIGVEFAT+T+ E K
Sbjct: 1 MASKNEDEYDFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKY 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQE+YRAIT+AYYRGAVGAL +YDITK+QTFDNV +WL ELR++AD+NI+
Sbjct: 61 IKAQIWDTAGQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIIC 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK DL +R V EDA AE+ L+F+ETSA +A+NV++AFQ ++ +IY+ + +
Sbjct: 121 MLIGNKCDLQEMRQVKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYNNLKTR 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
++ A + + K K CC
Sbjct: 181 PNEEKKKAQPQQNGNNIIKDFKQPTQAEKEKKCC 214
>gi|297790260|ref|XP_002863031.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308833|gb|EFH39290.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/166 (79%), Positives = 144/166 (86%), Gaps = 3/166 (1%)
Query: 52 RTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELR 111
R + VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV RWLRELR
Sbjct: 2 RVITVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELR 61
Query: 112 DHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILL 171
DHADSNIVIMMAGNK+DLNHLR+VA ED Q LAE EGLSFLETSALEA NVEKAFQT+L
Sbjct: 62 DHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLA 121
Query: 172 DIYHIISKK-ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
+IYHIISKK A + AA+++ +P QGTTINV + SG K + CCS
Sbjct: 122 EIYHIISKKALAAQEAAAANSAIPGQGTTINVGDTSGAGK-RGCCS 166
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 154/210 (73%), Gaps = 13/210 (6%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FKIV+IGD VGKS +LS F RNEF L+SK TIGVEFATR+++ E K VKAQIWDTA
Sbjct: 11 DYVFKIVVIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIRFEDKVVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERY AITSAYYRGA GALLVYD+T+ TF+ V RWL+ELRDH DSNIVIM+ GNK+DL
Sbjct: 71 GQERYLAITSAYYRGAAGALLVYDVTRHATFETVGRWLKELRDHTDSNIVIMLVGNKADL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
HLRAV+ EDA+ AEKE + F+ETSA + NV+ +F+T+L DIY I+SKK+L A
Sbjct: 131 RHLRAVSTEDAKAFAEKESIFFMETSAQDT-NVKTSFETLLTDIYRILSKKSLVADTYVD 189
Query: 190 STGLPQGTTINVANLSGNVK----GKACCS 215
S + VA L G K CCS
Sbjct: 190 S--------LTVARLLGGTKISVGPGGCCS 211
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 160/216 (74%), Gaps = 8/216 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YD LFKIVLIGDSGVGKSN+LSRFT+NEF ++SKSTIGVEFATRTL+++GK +KAQIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL---- 182
SDL HLRAV E+++ A++ L F ETSAL + NV+KAF+ ++ IY +SK +
Sbjct: 128 SDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGD 187
Query: 183 -AAQEAASSTGLPQGTTINV---ANLSGNVKGKACC 214
+A A+ P G TI++ N + G CC
Sbjct: 188 SSANGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/159 (76%), Positives = 138/159 (86%)
Query: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
L +VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KTVKAQIWDTAGQ
Sbjct: 17 LHPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQ 76
Query: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNH 131
ERYRAITSAYYRGAVGALLVYDI K T++N RWL EL+DHAD+NI+IM+ GNKSDL H
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLTELQDHADANIIIMLVGNKSDLRH 136
Query: 132 LRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
LRAV ++A+ AEK GLSFLETSAL++ NVE AF IL
Sbjct: 137 LRAVPTDEARSFAEKNGLSFLETSALDSTNVEMAFHNIL 175
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/223 (56%), Positives = 163/223 (73%), Gaps = 7/223 (3%)
Query: 1 MAYKVDHEY--DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
MAY D + DYLFKIVL+GDS VGKSN+L+RF RNEF SKSTIGVEF T+ L ++G
Sbjct: 1 MAYGGDEQQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDG 60
Query: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDIT+RQTFD+V RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHAHSDMNV 120
Query: 119 VIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS 178
V ++ GNK+DL H R V+ + + LAE +GL F+ETSAL++ NV AFQT++ +IY I+S
Sbjct: 121 VTILIGNKTDLKHAREVSPAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVKEIYSILS 180
Query: 179 KKALAAQEAASS--TGLPQGTTINV---ANLSGNVKGKACCSN 216
+K +QE S L G + + A + + G+ CCS+
Sbjct: 181 RKVFQSQEQKKSELQSLSNGKAVVLQSDAPSATSSGGRWCCSS 223
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 158/211 (74%), Gaps = 3/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT +EF + SKSTIGVEFATRT++VEGK VKAQIW
Sbjct: 9 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIW 68
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNK 128
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV ++A+ A++ + F ETSAL A NV+ AF+ ++ IY ++SK + E
Sbjct: 129 SDLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSE 188
Query: 187 AASSTGLPQGTTINVANLSGNVKGKA---CC 214
S +P+G TI++A K CC
Sbjct: 189 NNGSGTVPRGPTISLAPAPSEKSKKKTNNCC 219
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 159/216 (73%), Gaps = 8/216 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YD LFKIVLIGDSGVGKSN+LSRFT+NEF ++SKSTIGVEFATRTL+++GK +KAQIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR+ AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREKADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL---- 182
SDL HLRAV E+++ A++ L F ETSAL + NV+KAF+ ++ IY +SK +
Sbjct: 128 SDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGD 187
Query: 183 -AAQEAASSTGLPQGTTINV---ANLSGNVKGKACC 214
+A A+ P G TI++ N + G CC
Sbjct: 188 SSANGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 154/211 (72%), Gaps = 18/211 (8%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ A E AFQTIL +IY I+S+K ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFA------------------EAAFQTILTEIYRIVSQKQMSDR 166
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + N CC N
Sbjct: 167 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 197
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 157/213 (73%), Gaps = 7/213 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D + LFKIVLIGDSGVGK+N+ SRFT EF LESKSTIGV+FAT+ + ++GK VKAQI
Sbjct: 5 DPQLGLLFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVIDGKVVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI+K TF N+ RWL ELR++A ++VIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKPDTFLNLDRWLDELREYASDDVVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK-ALAA 184
K DL HLR V EDA++ AE++G+SF+ETSAL A NVE+AF L IY+++SK+ + A
Sbjct: 125 KCDLKHLRCVLTEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVSKRPSFNA 184
Query: 185 QEA--ASSTGLPQGTTINVANLSGNVKGKACCS 215
E + LP + NL K K CC+
Sbjct: 185 DEGNIIPTNNLP----VEEPNLKETTKKKFCCT 213
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 164/221 (74%), Gaps = 6/221 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA D E DYLFK VLIGDS VGKSN+LSRF+R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MADSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKL 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TFDNV +WL ELRD S++V+
Sbjct: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
++ GNKSD++HLR V +D + LAE E L F+ETSALE LNVE+AF ++ I+ I S+K
Sbjct: 121 VLVGNKSDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQK 180
Query: 181 ALAAQ--EAASST--GLPQGT-TINVAN-LSGNVKGKACCS 215
+L A+ E ST LP G IN+ + +S + CCS
Sbjct: 181 SLEAKKNETTISTIKALPVGKEVINIDDEVSATKQASYCCS 221
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 163/214 (76%), Gaps = 7/214 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT +EF LESKSTIGVEFATRT+ V+GK +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K+ +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLAELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA--LAA 184
SDL+HLRAV ++A+ A++ L F ETSAL + NV++AF+ ++ IY +ISK L
Sbjct: 128 SDLSHLRAVPTDEAKKFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGV 187
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKA----CC 214
++ P+G TI++ + N K K+ CC
Sbjct: 188 DNNNNTLNAPKGPTISLT-PAPNEKKKSSSNNCC 220
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 163/216 (75%), Gaps = 8/216 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YD LFKIVLIGDSGVGKSN+LSRFT+NEF ++SKSTIGVEFATRTL+++GK +KAQIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV E+++ A++ L F ETSAL + NV++AF+ ++ IY +SK + +
Sbjct: 128 SDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDEAFEELINTIYQKVSKHQMDLGD 187
Query: 187 AASSTGL-----PQGTTINV---ANLSGNVKGKACC 214
++++ + P G TI++ N + N G CC
Sbjct: 188 SSTNGNVNGASAPNGPTISLTPTPNENKNGSGNNCC 223
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 146/175 (83%), Gaps = 1/175 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + EYDYL K+VLIGDSGVGKSN+LSRF +NEF LESK+TIGVEF T+T++ K
Sbjct: 1 MTSRGEDEYDYLLKVVLIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIECGSKI 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAV A LVYDITK TF NV +WL+EL+D+ADSNIV+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVAAFLVYDITKLHTFQNVEKWLQELKDYADSNIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH 175
M+ GNK+DLN+LRAV EDAQI AEK L+F+ETSAL++ NV +AF+ I + IYH
Sbjct: 121 MLVGNKTDLNNLRAVKVEDAQIYAEKNELAFIETSALDSTNVVEAFEQI-IQIYH 174
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 163/208 (78%), Gaps = 2/208 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
E DYL KIVLIGDSGVGK+N+L+RFTR++F ESKSTIGVEFA++T+Q+EGKT+KAQIWD
Sbjct: 5 EPDYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWD 64
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGA+GALL+YDIT TF+++ +WL+ELR++AD I++M+ GNK
Sbjct: 65 TAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKC 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL+ RAV + +A A+ + L F+ETSA EA NV +AFQT++ +I + ++K+ +AA+E
Sbjct: 125 DLSEQRAVTSANALEFAKAQNLLFIETSAREATNVNEAFQTLICEIVNKLNKQNVAAEEK 184
Query: 188 ASSTGLP-QGTTINVANLSGNVKGKACC 214
A+ P QG +I A S K K CC
Sbjct: 185 ANVQETPRQGVSI-TATKSPEEKKKGCC 211
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 153/206 (74%)
Query: 11 YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAG 70
+LFK+VLIG SG G+SN+LSRF RNEF L+SKST G++FATR++QV+GKT+KAQIWDTAG
Sbjct: 1 HLFKVVLIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQVDGKTIKAQIWDTAG 60
Query: 71 QERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLN 130
QER RA TSAYYR A+GALLV+DI K T++NV RWL+E RDHADSNIVIM+ NKSDL
Sbjct: 61 QERCRATTSAYYREALGALLVFDIAKHLTYENVERWLKEPRDHADSNIVIMLVRNKSDLC 120
Query: 131 HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASS 190
HLRAV ++A+ AEK GL F+E+SAL NVE AFQTIL +IY +S+K ++ +
Sbjct: 121 HLRAVPTDEARAFAEKNGLPFIESSALHWTNVEAAFQTILTEIYRTVSQKQISDRRENDM 180
Query: 191 TGLPQGTTINVANLSGNVKGKACCSN 216
+ I+V + + CC N
Sbjct: 181 SPSSNMVPIHVPPTTESKPKMQCCQN 206
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 158/211 (74%), Gaps = 5/211 (2%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFKIVLIGDS VGKSN+L+R+ RNEF SKSTIGVEF T+T+Q++GK +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDGKEIKAQIWDTA 71
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++RQTFDN++RWL EL H+D N+V ++ GNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNVVTVIVGNKTDL 131
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
R V+ E+ LAE + + F+ETSAL++ NV+ AFQT++ +IY+I+S+K L+ QE
Sbjct: 132 LDAREVSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTVVKEIYNILSRKVLSCQEQKL 191
Query: 190 STGLPQGTTINVANLSGNVKGKA-----CCS 215
+ + G T+ + K CCS
Sbjct: 192 ESKISNGKTVVLQEAESESTAKQTGKLWCCS 222
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 128/223 (57%), Positives = 160/223 (71%), Gaps = 7/223 (3%)
Query: 1 MAYKVDHEY--DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
MAY D E DYLFKIVL+GDS VGKSN+L+RF RNEF SKSTIGVEF T+ L ++G
Sbjct: 1 MAYGGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDG 60
Query: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDIT+RQTFD+V RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHTHSDMNV 120
Query: 119 VIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS 178
V ++ GNK+DL H R V+ + + LAE +GL F+ETSAL++ NV+ AFQT++ +IY I+S
Sbjct: 121 VTILIGNKTDLKHAREVSTAEGKALAEAQGLFFMETSALDSSNVKAAFQTVVKEIYSILS 180
Query: 179 KKALAAQEAASS--TGLPQGTTINV---ANLSGNVKGKACCSN 216
+K QE S L G + + A N CCS+
Sbjct: 181 RKVFQCQEQKRSDLQSLSNGKAVVLQTDAPKEANSGRGWCCSS 223
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 162/209 (77%), Gaps = 4/209 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT NEF +ESKSTIGVEFATRT+++EGK +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEMEGKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K T++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLSELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV ++A+ A + L F ETSAL + NV++AF+ ++ IY ++SK + +
Sbjct: 128 SDLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGD 187
Query: 187 AAS---STGLPQGTTINVANLSGNVKGKA 212
+ + + G P+G TI++ + N K KA
Sbjct: 188 SGNNDINNGTPKGPTISLTP-APNEKKKA 215
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/177 (67%), Positives = 146/177 (82%), Gaps = 1/177 (0%)
Query: 7 HE-YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
HE DY+FK+V+IGDS VGK+ ILSRFT+NEFC +SKSTIGVEF TRT+ ++ K +KAQI
Sbjct: 19 HEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQI 78
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQTFD+V RW+ ELR HAD++IVIM+ GN
Sbjct: 79 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGN 138
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
K+DL RAV +EDA +E +GL F ETSAL NVE AF +L +IY ++SKKAL
Sbjct: 139 KADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKAL 195
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 160/212 (75%), Gaps = 4/212 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT NEF +ESKSTIGVEFATRT++VEGK +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K T++N WL EL+++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELKENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV ++A+ A + L F ETSAL + NV++AF+ ++ IY ++SK + +
Sbjct: 128 SDLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGD 187
Query: 187 AASSTGL-PQGTTINV---ANLSGNVKGKACC 214
+ +S P+G TI++ N + CC
Sbjct: 188 SNTSGATAPKGPTISLTPAPNENKKSSSNNCC 219
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/177 (67%), Positives = 146/177 (82%), Gaps = 1/177 (0%)
Query: 7 HE-YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
HE DY+FK+V+IGDS VGK+ ILSRFT+NEFC +SKSTIGVEF TRT+ ++ K +KAQI
Sbjct: 23 HEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQI 82
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQTFD+V RW+ ELR HAD++IVIM+ GN
Sbjct: 83 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGN 142
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
K+DL RAV +EDA +E +GL F ETSAL NVE AF +L +IY ++SKKAL
Sbjct: 143 KADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKAL 199
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 151/204 (74%), Gaps = 5/204 (2%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y V + DY+FK+V+IGDS VGK+ ILSRF +NEFC +SKSTIGVEF TRT+ + GK +K
Sbjct: 23 YDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIK 82
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQ+FD+V RW+ ELR HADS+IVIM+
Sbjct: 83 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIML 142
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNK+DL R V EDA AE +GL F ETSAL NVE AF +L +I ++SKKAL
Sbjct: 143 VGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKAL 202
Query: 183 AAQEAASSTGLPQGTTINVANLSG 206
G G VA+L+G
Sbjct: 203 EC-----GYGKENGDNNVVASLNG 221
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/155 (78%), Positives = 136/155 (87%)
Query: 16 VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYR 75
VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+ KTVKAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYR 60
Query: 76 AITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAV 135
AITSAYYRGAVGALLVYDI K T++N RWL EL+DHAD+NIVIM+ GNKSDL HLRAV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLRHLRAV 120
Query: 136 AAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
++A+ AE+ GLSFLETSAL++ NVE AF IL
Sbjct: 121 PTDEARSFAERNGLSFLETSALDSTNVETAFHNIL 155
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 163/217 (75%), Gaps = 10/217 (4%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT N+F LESKSTIGVEFATRT++VE K +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K+ +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLTELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA--LAA 184
SDL+HLRAV E+A+ A++ L F ETSAL + NV++AF+ ++ IY +ISK L +
Sbjct: 128 SDLSHLRAVPTEEAKNFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGS 187
Query: 185 QEAASSTGLP---QGTTINVANLSGNVKGKA----CC 214
S G +G TI++ + N K K+ CC
Sbjct: 188 DNNGSGNGASNNIKGPTISLT-PTPNEKTKSSSNNCC 223
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 151/204 (74%), Gaps = 6/204 (2%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y V + DY+FK+V+IGDS VGK+ ILSRF +NEFC +SKSTIGVEF TRT+ + K +K
Sbjct: 23 YDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINAKVIK 82
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQ+FD+V RW+ ELR HADS+IVIM+
Sbjct: 83 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIML 142
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNK+DL R V EDA AE +GL F ETSAL NVE AF +L +I ++SKKAL
Sbjct: 143 VGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKAL 202
Query: 183 AAQEAASSTGLPQGTTINVANLSG 206
G G T NVA+L G
Sbjct: 203 EC-----GLGKENGDT-NVASLKG 220
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 159/222 (71%), Gaps = 6/222 (2%)
Query: 1 MAYKVD--HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
MAY D DYLFKIVL+GDS VGKSN+L+RF RNEF SKSTIGVEF T+ L ++G
Sbjct: 1 MAYDGDDGQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDG 60
Query: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD+V RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNV 120
Query: 119 VIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS 178
V ++ GNK+DL H R V+ + Q LAE +GL F+ETSAL++ NV AFQT++ +IY I+S
Sbjct: 121 VTILVGNKTDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILS 180
Query: 179 KKALAAQEAASS--TGLPQGTTINVANLSGNVK--GKACCSN 216
+K + E S L G + + + G+ CCS+
Sbjct: 181 RKVFQSLEQKKSELQSLSNGKAVVLQGETNQTSSGGRWCCSS 222
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 160/211 (75%), Gaps = 3/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YLFKIVL+G+S VGKSN+LSRFTR+EF +ESK+TIGVEFATRT++V+GK +KAQIW
Sbjct: 10 YDYEYLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEVDGKRIKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRA+T+AYYRGAVGALLVYDI+ +++ +RWL EL+DHAD+NIV+ + GNK
Sbjct: 70 DTAGQERYRAVTAAYYRGAVGALLVYDISNSSSYEGASRWLSELKDHADANIVVELVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDLNHLRAV ++A+ A ++GL F E SAL + NVE AFQ ++ IY ++SK +
Sbjct: 130 SDLNHLRAVPTDEAKSFATEKGLLFTEASALNSENVELAFQQLIKAIYDMVSKHQFDMND 189
Query: 187 AASST-GLPQGTTINVANLSGN--VKGKACC 214
+ + G TI + + +K +CC
Sbjct: 190 YGNDNKPITGGQTITLTPTPKDSKIKKDSCC 220
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 162/219 (73%), Gaps = 12/219 (5%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT NEF +ESKSTIGVEFATRT++VEGK +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K T++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK------K 180
SDL HLRAV ++A+ A++ L F ETSAL + NV++AF+ ++ IY ++SK
Sbjct: 128 SDLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLDN 187
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKA-----CC 214
+ A + G P+G TI++ + N K K CC
Sbjct: 188 SNGQGAAGAGNGAPRGPTISLT-PTPNEKSKKNSSSNCC 225
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 156/211 (73%), Gaps = 4/211 (1%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFKIVLIGDS VGKSN+L+RF RNEF SKSTIGVEF T+ L ++GK +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGALLVYDI++RQTFD+V RWL EL +H+D N+V ++ GNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHNHSDMNVVTILVGNKTDL 131
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
H R V+ + Q LAE +GL F+ETSAL++ NV AFQT++ +IY I+S+K + E
Sbjct: 132 KHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVFQSLEQKK 191
Query: 190 S--TGLPQGTTINVANLSGNVK--GKACCSN 216
S L G + + + G+ CCS+
Sbjct: 192 SELQSLSSGKAVVLQGEANQTSSGGRWCCSS 222
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 146/184 (79%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF SK+TIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEVKAQIWDTA 67
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TFDNV RWL EL+ HADSN+V M+ GNKSDL
Sbjct: 68 GQERFRAVTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVGNKSDL 127
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
H+R V ED + LAE EGL F+ETSAL+ NV AFQ ++ +IY+ +SKK L + S
Sbjct: 128 EHIREVPVEDGRKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKMLNSDSYKS 187
Query: 190 STGL 193
L
Sbjct: 188 ELSL 191
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 160/224 (71%), Gaps = 8/224 (3%)
Query: 1 MAYKVDHEY--DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
MA+ + E DYLFKIVL+GDS VGKSN+L+RF RNEF SKSTIGVEF T+ L + G
Sbjct: 1 MAFVSEEEKTEDYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDING 60
Query: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL+ H+D N+
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNV 120
Query: 119 VIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS 178
V ++ GNKSDL R V+ + + LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S
Sbjct: 121 VTILVGNKSDLRDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 179 KKALAAQEAASSTGLPQGTTI------NVANLSGNVKGKACCSN 216
+K + + E G T+ N + + K CCS+
Sbjct: 181 RKVMMSHELKKQDAPLDGKTVVLQGDENQERATESPKSGGCCSS 224
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 158/214 (73%), Gaps = 13/214 (6%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+YDYLFK+VLIGDSGVGK+N+L RFTRNEF LESKSTIGVEFATR++QV+ K +KAQIWD
Sbjct: 4 DYDYLFKVVLIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDNKVIKAQIWD 63
Query: 68 TAGQERYRAITS-----AYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
T Y TS +YYRGAVGALL YDI+K TF++V+RWL+ELRDHADSNIVIM+
Sbjct: 64 TGN---YFISTSYTLNISYYRGAVGALLCYDISKHSTFESVSRWLKELRDHADSNIVIML 120
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNKSDL HLRAV ++A+ A + GLSF+ETSAL+A NVE +FQ IL +I+ I+S KAL
Sbjct: 121 VGNKSDLRHLRAVPTDEAKQFASENGLSFIETSALDATNVELSFQRILTEIHRIVSNKAL 180
Query: 183 -AAQEAASSTGLPQGTTINVANLSGNVKGK-ACC 214
+ A TG G TI V+ K CC
Sbjct: 181 ETSNNAIKPTG---GQTILVSQSPDEPKPSGGCC 211
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 162/207 (78%), Gaps = 1/207 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF L SK+TIGVEF T++++++GK VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TFD+V RWL EL+ H+D+ + +M+ GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++R V+ E+A+ LAE EGL F+ETSAL++ NV+KAF+ ++ +IY+ +S+K L + +
Sbjct: 130 ENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 190 STGLPQGTTINVANLSGNVKGK-ACCS 215
L + T +N N S + +CCS
Sbjct: 190 ELSLNRVTLVNNGNDSKQAQSYFSCCS 216
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 164/214 (76%), Gaps = 12/214 (5%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFKIVLIGDS VGKSN+LSR++RNEF L S++TIGVEF T+++ +EGK VKAQIWDTA
Sbjct: 10 DYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGA++VYDI+++QTF+NV RWL ELR ++D ++V M+ GNKSDL
Sbjct: 70 GQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNKSDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
LR V+ E+A LAE+EGL F+ETSAL++ NV AF+T++ +I+ ++SKK L++ + +
Sbjct: 130 ESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSSDSSKA 189
Query: 190 ST-------GLPQGTTINVANLSGNVKGKACCSN 216
T GL G + + G +CCS+
Sbjct: 190 GTLSGTKKLGLENGNSSKPQD-----SGLSCCSS 218
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 164/214 (76%), Gaps = 12/214 (5%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFKIVLIGDS VGKSN+LSR++RNEF L S++TIGVEF T+++ +EGK VKAQIWDTA
Sbjct: 10 DYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGA++VYDI+++QTF+NV RWL ELR ++D ++V M+ GNKSDL
Sbjct: 70 GQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNKSDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
LR V+ E+A LAE+EGL F+ETSAL++ NV AF+T++ +I+ ++SKK L++ + +
Sbjct: 130 ESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSSDSSKA 189
Query: 190 ST-------GLPQGTTINVANLSGNVKGKACCSN 216
T GL G + + G +CCS+
Sbjct: 190 RTLSGTKKLGLENGNSSKPQD-----SGLSCCSS 218
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 161/219 (73%), Gaps = 10/219 (4%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK +KAQI
Sbjct: 8 DKAEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD+V RWL EL H+D N+V ++ GN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL R V + + LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S+K + +Q
Sbjct: 128 KSDLKDAREVPTVEGKDLAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVILSQ 187
Query: 186 EAASSTGLPQ---GTTINVANLSGNVKG-----KACCSN 216
E + G P+ G T+ V GN +G K CCS+
Sbjct: 188 E-LNKPGAPELGNGKTV-VLQGDGNQEGNAETKKGCCSS 224
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 153/195 (78%), Gaps = 2/195 (1%)
Query: 1 MAYKVDHEY--DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
MAY D E DYLFKIVL+GDS VGKSN+L+RF RNEF SKSTIGVEF T+ L ++G
Sbjct: 1 MAYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDG 60
Query: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD+V RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNV 120
Query: 119 VIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS 178
V ++ GNK+DL H R V+ + + LAE +GL F+ETSAL++ NV +AFQT++ +IY I+S
Sbjct: 121 VTILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILS 180
Query: 179 KKALAAQEAASSTGL 193
+K L + ++ GL
Sbjct: 181 RKDLMTEPWCNAMGL 195
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 159/215 (73%), Gaps = 7/215 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT +EF +ESKSTIGVEFATRT++VE K +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL---- 182
SDL HLRAV ++A+ A + + F ETSAL + NV+KAF+ +++ I+ ++SK +
Sbjct: 128 SDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSG 187
Query: 183 AAQEAASSTGLPQGTTINVANLSGNVKGKA---CC 214
+ S G P+G TI++ K K CC
Sbjct: 188 SGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT +EF +ESKSTIGVEFATRT++VE K +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV ++A+ A + + F ETSAL + NV+KAF+ +++ I+ ++SK +
Sbjct: 128 SDLAHLRAVPTDEARNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLNG 187
Query: 187 AAS----STGLPQGTTINVANLSGNVKGKA---CC 214
+ S S G P+G TI++ K K CC
Sbjct: 188 SGSNNVGSNGGPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 158/207 (76%), Gaps = 2/207 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYL K+VL GDSGVGK+N+LSRFTRNEF LES+STIGVEFATR++ ++GKT+KAQIWD
Sbjct: 27 EYDYLAKVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHIDGKTLKAQIWD 86
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQ+RYRAIT+AYYR AVG + VYDI KR TFDN+ +WL+E R+ D ++++M+ GNK+
Sbjct: 87 TAGQDRYRAITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDDVILMLVGNKT 146
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEA 187
DL HLRAV++++A+ AEK +S++ETSAL+ +V+ AFQ+IL +IY IS+K L ++
Sbjct: 147 DLRHLRAVSSQEARSYAEKNNMSYIETSALDCTHVDLAFQSILKEIYSTISQKGL--KDD 204
Query: 188 ASSTGLPQGTTINVANLSGNVKGKACC 214
LP ++ + + CC
Sbjct: 205 TGGFNLPSVVDSMDIGITETEEKRKCC 231
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 115/173 (66%), Positives = 147/173 (84%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT NEF LESKSTIGVEFATRT++VEGK +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVEGKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR +AD+N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCQHWLTELRGNADANVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
SDL+H+RAV ++A+ A++ L F ETSAL++ NV++AF+ ++ IY ++SK
Sbjct: 128 SDLDHMRAVPTDEAKNFAQENQLLFTETSALQSSNVDQAFRELITAIYQMVSK 180
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 160/218 (73%), Gaps = 17/218 (7%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDY+FK+V+IGDSGVGKS +L F RN LESKSTIGVEFATR+++ E K VKAQIWD
Sbjct: 7 EYDYVFKVVVIGDSGVGKSQLLMGFARNH-NLESKSTIGVEFATRSIRFEDKVVKAQIWD 65
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM+ GNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 125
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFL------ETSALEALNVEKAFQTILLDIYHIISKKA 181
DL HLRAVA EDA+ AE E F+ ETSAL ++AF+ +L DIY I S+K
Sbjct: 126 DLRHLRAVATEDAKAFAEMESTFFMGNIRYGETSAL-----KEAFKNVLTDIYRIASQKN 180
Query: 182 LAAQEAASSTGLPQGTTI---NVANLSGNVKGKACCSN 216
L+A AA + QG + +V G K ++CCSN
Sbjct: 181 LSAN-AAQTHLQGQGKVVQNDDVQEPQGKSK-RSCCSN 216
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 162/220 (73%), Gaps = 11/220 (5%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DYLFKIVLIGDS VGKSN+L+RF RNEF SKSTIGVEF T+ + + GK +KAQI
Sbjct: 8 DKADDYLFKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ +WL EL H+D N+V ++ GN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL R V+ + + LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S+K + +Q
Sbjct: 128 KSDLKDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSQ 187
Query: 186 EAASSTGLPQ---GTTINVANLSGNVKGKA------CCSN 216
E + G P+ G T+ V G+ +G A CCS+
Sbjct: 188 E-LNKPGAPELGNGKTV-VLKGDGDQEGNAGTKKGWCCSS 225
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 159/215 (73%), Gaps = 7/215 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT +EF +ESKSTIGVEFATRT++VE K +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL---- 182
SDL HLRAV ++A+ A + + F +TSAL + NV+KAF+ +++ I+ ++SK +
Sbjct: 128 SDLAHLRAVPTDEAKNFAMENQMLFTDTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSG 187
Query: 183 AAQEAASSTGLPQGTTINVANLSGNVKGKA---CC 214
+ S G P+G TI++ K K CC
Sbjct: 188 SGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 159/211 (75%), Gaps = 5/211 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D Y+++FK+VLIG+SGVGKSN+LSRFT+NEF +S++TIGVEF+TRT+Q+ G T+KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDI+K T+++ RWL+EL DHAD +IV+M+ GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL +R+V EDA+ AEK GL F ETSALE++NVE AF T+L +I+ ++ K + +
Sbjct: 124 KSDLAAVRSVPTEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIHKKVNSKEV-TR 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ S+ L Q T + K CC N
Sbjct: 183 GSISAVTLSQPKT----PAETQEEKKTCCKN 209
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 159/213 (74%), Gaps = 7/213 (3%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE--A 187
R VA + + LAE +GL F+ETSAL++ NV AF+T++ +IY+I+S+K + +QE
Sbjct: 132 KDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMISQELNK 191
Query: 188 ASSTGLPQGTTINVANLSGNVKG----KACCSN 216
T + G T+ V G+V+ K CCS+
Sbjct: 192 QDVTRIENGKTV-VLQGEGDVEAAQSKKGCCSS 223
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 158/214 (73%), Gaps = 3/214 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK +KAQI
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTF ++ RWL EL H+D N+V ++ GN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL LR V+ + + LAE +GL F+ETSAL++ NV AF+T++ +IY+I+S+K +++Q
Sbjct: 128 KSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 186 E--AASSTGLPQGTTINV-ANLSGNVKGKACCSN 216
E L G + + ++ G K CCS+
Sbjct: 188 ELNKQDPASLSNGKKVVIPSDGQGEFKKGGCCSS 221
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 162/207 (78%), Gaps = 1/207 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF L SK+TIGVEF T++++++GK VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TFD+V RWL EL+ H+D+ + +M+ GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++R V+ E+ + LAE EGL F+ETSAL++ NV+KAF+ ++ +IY+ +S+K L + +
Sbjct: 130 ENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 190 STGLPQGTTINVANLSGNVKGK-ACCS 215
L + T +N + S +G +CCS
Sbjct: 190 ELSLNRVTLVNNGSDSKQAQGYFSCCS 216
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 160/212 (75%), Gaps = 4/212 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YD+LFKIVLIGDSGVGKSN+LSRFT NEF L+SK+TIGVEFATRT++VEGK +KAQIW
Sbjct: 8 YDYDFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+AYYR AVGAL+VYDITK +++N WL EL+ +AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITTAYYRAAVGALIVYDITKSSSYENCNHWLAELKQNADENVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL+H RAV ++A+ A++ L F ETSAL A NV++AF+ ++ IY +ISK L +
Sbjct: 128 SDLDHKRAVPTDEARNYAQENQLLFTETSALNADNVDEAFRALITAIYQMISKNQLDLND 187
Query: 187 AA-SSTGLPQGTTINVANLSGNVKGKA---CC 214
A+ ++ P+G TI++ K+ CC
Sbjct: 188 ASGNNANAPKGPTISLTPAPNEKHKKSTNNCC 219
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 157/200 (78%), Gaps = 5/200 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YD LFKIVLIGDSGVGKSN+LSRFT+NEF ++SKSTIGVEFATRTL+++GK +KAQIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV E+++ A++ L F ETSAL + NV+KAF+ ++ IY +SK + +
Sbjct: 128 SDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGD 187
Query: 187 AASSTGL-----PQGTTINV 201
++++ + P G TI++
Sbjct: 188 SSTNGNVNGASAPNGPTISL 207
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 158/214 (73%), Gaps = 3/214 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK +KAQI
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTF ++ RWL EL H+D N+V ++ GN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL LR V+ + + LAE +GL F+ETSAL++ NV AF+T++ +IY+I+S+K +++Q
Sbjct: 128 KSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 186 E--AASSTGLPQGTTINV-ANLSGNVKGKACCSN 216
E L G + + ++ G K CCS+
Sbjct: 188 ELNKQDPASLSNGKKVVIPSDGQGESKKGGCCSS 221
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/141 (82%), Positives = 129/141 (91%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEK 146
KSDL HLRAV ++A+ AEK
Sbjct: 125 KSDLRHLRAVPTDEARAFAEK 145
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 160/213 (75%), Gaps = 8/213 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D Y+++FK+VLIG+SGVGKSN+LSRFT+NEF +S++TIGVEF+TRT+Q++ +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSLIIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDITK T+++V RWL+EL DHAD +IV+M+ GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH-IISKKALAA 184
K+DL R+V E+A+ AEK GL FLETSALE+ NVE AFQ +L +I+ + SKK L
Sbjct: 124 KTDLGSERSVPNEEAKDFAEKNGLLFLETSALESTNVETAFQNVLGEIHRKVSSKKVLRG 183
Query: 185 QEAASSTGLPQGTTINVANLSGNV-KGKACCSN 216
+A S P V +G+ + K CC N
Sbjct: 184 SISAVSLASP------VPRAAGDPEEKKPCCRN 210
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/141 (82%), Positives = 129/141 (91%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEK 146
KSDL HLRAV ++A+ AEK
Sbjct: 125 KSDLRHLRAVPTDEARAFAEK 145
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/200 (61%), Positives = 153/200 (76%), Gaps = 3/200 (1%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
IVLIGDSGVGKSN+L R+T+NEF LESKSTIGVEFATR++Q + KT+KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLVYDI+K T++NV +WL+ELRDHAD +IVIM+ GNKSDL HLR
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADPSIVIMLVGNKSDLRHLRN 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY-HIISKKALAAQEAASSTGL 193
V E+A+ A++ LSF+ETSAL + NVE AF TIL +IY +++ A + + +
Sbjct: 121 VPTEEAKNFAQRNNLSFIETSALHSTNVETAFHTILQEIYKNVVRTLGGGAADDKDNKNV 180
Query: 194 PQGTTINVANLSGNVKGKAC 213
G + V +G K K C
Sbjct: 181 ETGVVVTVD--TGGEKKKDC 198
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 158/215 (73%), Gaps = 7/215 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT +EF +ESKSTIGVEFATRT++VE K +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL---- 182
SDL HLRAV ++A+ A + + F TSAL + NV+KAF+ +++ I+ ++SK +
Sbjct: 128 SDLAHLRAVPTDEAKNFAMENQMLFTXTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSG 187
Query: 183 AAQEAASSTGLPQGTTINVANLSGNVKGKA---CC 214
+ S G P+G TI++ K K CC
Sbjct: 188 SGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 156/212 (73%), Gaps = 5/212 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT NEF ++SKSTIGVEFATRT+ V+GK +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVDGKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCHHWLSELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV E+A+ A + L F ETSAL + NV+ AF+ ++ I+ +SK +
Sbjct: 128 SDLAHLRAVPTEEAKQFASENQLLFTETSALNSDNVDLAFKELITAIHQKVSKHQVELSN 187
Query: 187 AASSTGLPQGTTINVANLSGNVKGKA----CC 214
A P G TI++ + N K K+ CC
Sbjct: 188 ANKPGAGPNGPTISLT-PAPNEKKKSSSNNCC 218
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/224 (54%), Positives = 161/224 (71%), Gaps = 8/224 (3%)
Query: 1 MAYKVDHEY--DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
MA+ + E DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ +++ G
Sbjct: 1 MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEING 60
Query: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 119 VIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS 178
V ++ GNKSDL R V + + LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S
Sbjct: 121 VTILVGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
Query: 179 KKALAAQEAASS--TGLPQGTTINVA----NLSGNVKGKACCSN 216
+K + +QE + + G T V + G K CCS+
Sbjct: 181 RKVMISQELKKQDVSWMENGKTTVVIQGEDQVEGEPKKGGCCSS 224
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 157/213 (73%), Gaps = 7/213 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D LFKIVLIGDSGVGK+N+ SRFT +EF LESKSTIGV+FAT+ ++++GK VKAQI
Sbjct: 5 DSNIGLLFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGA+LVYDI+K TF N+ +WL EL+++A +++IM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLIGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA---L 182
K DL HLR V EDA A+++G+SF+ETSAL+++NVE+AF + DIY++ISK +
Sbjct: 125 KCDLKHLRCVLTEDATRYAKQQGISFMETSALDSINVEEAFNQTIRDIYYLISKHPSFNM 184
Query: 183 AAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ LP I N+ + K K CC+
Sbjct: 185 NETNIIPTNNLP----IQEPNIKQSAKRKFCCT 213
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 164/220 (74%), Gaps = 18/220 (8%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ E++++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRTL V+G VK+QI
Sbjct: 5 EEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVDGHLVKSQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDITK Q+++NV RWL+EL DHAD++IV+M+ GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVVMLVGN 124
Query: 126 KSDL-NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
K DL + + V +E+A+ AE+ GL F+ETSAL+A NVE AF+TIL DIY + K
Sbjct: 125 KCDLKDEAQEVPSEEAKAYAEQNGLLFIETSALDATNVEVAFETILRDIYTRVLKL---- 180
Query: 185 QEAASSTGLPQGTTINVANLSGNVKG--------KACCSN 216
G+ Q +TIN++ + + ++CC N
Sbjct: 181 -----KGGIQQPSTINLSKEASPTQSITQVTEQKRSCCQN 215
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/178 (66%), Positives = 145/178 (81%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
V + DY+FK+V+IGDS VGK+ ILSRFT+NEFC +SKSTIGVEF TRT+ ++ K +KAQ
Sbjct: 1 VQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKDKVIKAQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRA+TSAYYRGA+GA+LVYDITKR TFD+V RW+ ELR HAD++IVIM+ G
Sbjct: 61 IWDTAGQERYRAVTSAYYRGALGAMLVYDITKRPTFDHVARWVEELRAHADNSIVIMLIG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
NK+DL LRAV EDA AE++GL F ETSAL NV+ AF +L +IY +I KK+L
Sbjct: 121 NKADLVDLRAVPTEDAVEFAEEQGLFFSETSALSGDNVDGAFFRLLEEIYGVICKKSL 178
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 166/220 (75%), Gaps = 18/220 (8%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +++++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRTL ++G VK+QI
Sbjct: 5 EEDFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDITK Q++++V RWL+EL DHAD++IV+M+ GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGN 124
Query: 126 KSDL-NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
KSDL + + V +E+A+ AE+ GL F+ETSAL+A NVE AF+TIL DIY + K
Sbjct: 125 KSDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFETILRDIYTRVLK----- 179
Query: 185 QEAASSTGLPQGTTINVANLSGNVKG--------KACCSN 216
S G+ Q +TIN++ + + ++CC N
Sbjct: 180 ----SKGGIQQPSTINLSKEASPTQSITQVTEQKRSCCQN 215
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 158/211 (74%), Gaps = 8/211 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D Y+++FK+VLIG+SGVGKSN+LSRFT+NEF +S++TIGVEF+TRT+Q+ T+KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDITK T+++V RWL+EL +HAD +IV+M+ GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVMLIGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL R+V E+A+ AEK+GL FLETSAL++ NVE AF T+L +I+ +S K +
Sbjct: 124 KSDLESERSVPTEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSKEVVR- 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
G T+N + + + K CC N
Sbjct: 183 ------GPMSAVTLNSPK-AEDTEKKPCCKN 206
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 163/218 (74%), Gaps = 17/218 (7%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
K + Y+++FK+VLIG+SGVGKSN+LSRF +NEF +S++TIGVEF+TRT+Q+ G T+KA
Sbjct: 6 KSNEAYNFVFKVVLIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLNGLTIKA 65
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAG ERYRAITSAYYRGAVGALLVYD+TK T+++V RWL+EL DHAD ++V+M+
Sbjct: 66 QIWDTAGLERYRAITSAYYRGAVGALLVYDVTKHLTYESVERWLKELYDHADPHMVVMLV 125
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNKSDL R+V E+A+ AEK+GL FLETSALE+ NVE AF +L +I+ +S K +
Sbjct: 126 GNKSDLVSERSVPTEEAKDFAEKKGLLFLETSALESTNVEAAFNDVLSEIHRKVSSKKVI 185
Query: 184 AQEAASSTGLPQGTTINVANLSGNV-----KGKACCSN 216
QG +I+ +L+G+V + K CC N
Sbjct: 186 -----------QG-SISAVSLAGHVPSNPEENKPCCKN 211
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 143/173 (82%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+V+IGDS VGK+ +LSRFT+NEFC +SKSTIGVEF TRT+ ++GK VKAQIWDTA
Sbjct: 18 DYVFKVVVIGDSAVGKTQLLSRFTKNEFCFDSKSTIGVEFQTRTVTIKGKVVKAQIWDTA 77
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GA+LVYDITKR TFD+V RW+ ELR HAD++IVI + GNK+DL
Sbjct: 78 GQERYRAVTSAYYRGALGAMLVYDITKRATFDHVARWVEELRAHADNSIVITLIGNKADL 137
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
RAV EDA AE +GL F ETSAL NV++AF +L +IY +ISKK+L
Sbjct: 138 VDQRAVPTEDAVEFAEDQGLFFSETSALSGDNVDRAFFRLLEEIYGVISKKSL 190
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 156/212 (73%), Gaps = 5/212 (2%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ +++ GK VKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTA 71
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE--A 187
R V + + LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S+K + +QE
Sbjct: 132 KDAREVPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILSRKVMMSQELKK 191
Query: 188 ASSTGLPQGTTINVANLSGNVK---GKACCSN 216
+ G T+ + V+ K CCS+
Sbjct: 192 QDTPWTENGKTVVLQEGDREVEVESKKGCCSS 223
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/141 (81%), Positives = 129/141 (91%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEK 146
KSDL HLRAV ++A+ AE+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEQ 145
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 160/207 (77%), Gaps = 1/207 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+L+R+ RNEF L SK+TIGVEF T+TL+++GK VKAQIWDTA
Sbjct: 2 EYLFKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDTA 61
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGA GAL+VYDIT+R TFD++ RWL EL+ H+D+ + M+ GNK DL
Sbjct: 62 GQERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCDL 121
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
+++RAV+ E+ + LAE EG+ F+ETSAL+A NV KAF ++ +IY+ +S+K L + +
Sbjct: 122 DNIRAVSVEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVLNSDSYKA 181
Query: 190 STGLPQGTTI-NVANLSGNVKGKACCS 215
+ + + + N + S +G +CCS
Sbjct: 182 ELSVNRVSLVDNGTDGSKQNQGYSCCS 208
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 155/211 (73%), Gaps = 1/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D E DYLFK VLIGDS VGKSN+LSRF+R+EF L+SK TIGVEFA R ++V K +KAQI
Sbjct: 7 DDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQI 66
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDIT+R TF+N+ +WLRELRD ++VI++ GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIVLVGN 126
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL H R V E+ + LAE EGL F+ETSALE LNVE+AF ++ I+ + S+K L A+
Sbjct: 127 KSDLGHSREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQKNLEAK 186
Query: 186 EAASSTGLPQGT-TINVANLSGNVKGKACCS 215
L G I+V + K +CCS
Sbjct: 187 LNEPVKPLIIGKEIIHVDHEVSATKQSSCCS 217
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 159/224 (70%), Gaps = 8/224 (3%)
Query: 1 MAYKVDHEY--DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG 58
MA+ + E DYLFKIVL GDS VGKSN+L+RF RNEF +SKSTIGVE T+ L + G
Sbjct: 1 MAFVSEEEKTEDYLFKIVLDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDING 60
Query: 59 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL+ H+D N+
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNV 120
Query: 119 VIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS 178
V ++ GNKSDL R V+ + + LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S
Sbjct: 121 VTILVGNKSDLRDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 179 KKALAAQEAASSTGLPQGTTI------NVANLSGNVKGKACCSN 216
+K + + E G T+ N + + K CCS+
Sbjct: 181 RKVMMSHELKKQDAPLDGKTVVLQGDENQERATESPKSGGCCSS 224
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D + DYLFK VLIGDSGVGKSN++SRF ++EF L+SK TIGVEFA R ++V K +KAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+GA+LVYDITKR TF NV +WL ELR+ ++V+++ GN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL+ R V E+ +++AE E L F+ETSAL+ LNV++AF ++ I+ IIS+K+L +
Sbjct: 128 KSDLDQSRQVEREEGKVVAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLETK 187
Query: 186 EAASSTGLPQGTTINVAN-LSGNVKGKACCS 215
++ LP G I++A+ ++ + K CCS
Sbjct: 188 MNGTALNLPSGKEIHIADEVTATKQAKYCCS 218
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 159/211 (75%), Gaps = 1/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D + DYLFK VLIGDSGVGKSN++SRF ++EF L+SK TIGVEFA R ++V K +KAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+GA+LVYDITKR TF NV +WL ELR+ ++V+++ GN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL+ R V E+ ++ AE E L F+ETSAL+ LNV++AF ++ I+ IIS+K+L +
Sbjct: 128 KSDLDQSRQVEREEGKVFAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLETK 187
Query: 186 EAASSTGLPQGTTINVAN-LSGNVKGKACCS 215
++ LP G I++A+ ++ + K CCS
Sbjct: 188 MNGTALNLPSGKEIHIADEVTATKQAKYCCS 218
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 158/216 (73%), Gaps = 10/216 (4%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL H+D N+V ++ GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE--A 187
R VA + + LAE +GL F+ETSAL++ NV AF+T++ +IY+I+S+K + +QE
Sbjct: 132 KDARKVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMMSQELNK 191
Query: 188 ASSTGLPQGTTINVANLSGNVKGKA-------CCSN 216
T + G T+ V G G+A CCS+
Sbjct: 192 QDVTRIENGKTV-VLQGEGEGDGEADAQSKKRCCSS 226
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 143/178 (80%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
V + DY+FK+V+IGDS VGK+ ILSRF +NEFC +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 17 VHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQ 76
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRA+TSAYYRGA+GA+LVYDI+KRQ+FD+V RW+ ELR HADS+IVIM+ G
Sbjct: 77 IWDTAGQERYRAVTSAYYRGALGAMLVYDISKRQSFDHVARWVDELRAHADSSIVIMLIG 136
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
NK DL R V AEDA AE +GL F ETSAL NVE AF +L +I+ +ISK++L
Sbjct: 137 NKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESAFFKLLEEIHRVISKRSL 194
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 116/173 (67%), Positives = 141/173 (81%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+V+IGDS VGK+ ILSRFT++EFC +SKSTIGVEF TRT+ ++GK +KAQIWDTA
Sbjct: 17 DYVFKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTIKGKVIKAQIWDTA 76
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GA+L+YDITKR TFD+V RW+ ELR HAD++IVIM+ GNK DL
Sbjct: 77 GQERYRAVTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAHADNSIVIMLIGNKVDL 136
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
LRAV AEDA AE +GL F ETSA NV+ AF +L +IY + KKAL
Sbjct: 137 VDLRAVPAEDAVEFAEDQGLFFSETSAFSGDNVDSAFFRLLEEIYDTVCKKAL 189
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 155/213 (72%), Gaps = 3/213 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK +KAQI
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TSAYYRGAVGALLVYDI+++QTF ++ RWL EL H+D N+V ++ GN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRQQTFQSIGRWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL +R V + + LAE +GL F+ETSAL++ NV AF+T++ +IY+I+S+K +++Q
Sbjct: 128 KSDLKGIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 186 E--AASSTGLPQGTTINVAN-LSGNVKGKACCS 215
E L G + + + G K CCS
Sbjct: 188 ELNKQDPASLSNGKKVVIPSEEQGESKKGGCCS 220
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 156/211 (73%), Gaps = 7/211 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D Y+++FK+VLIG+SGVGKSN+LSRFT+NEF +S++TIGVEF+TRT+Q+ T+KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDITK T+++V RWL+EL DHAD ++V+M+ GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL R+V +E+A+ A+K GL FLETSALE+ NVE AF +L +I+ +S + +
Sbjct: 124 KTDLESERSVPSEEAKDFADKNGLMFLETSALESTNVEAAFNGVLAEIHRKVSSREVL-- 181
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
G ++N + + K CC N
Sbjct: 182 -----RGPISAVSLNSSGAESTEENKPCCRN 207
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 160/208 (76%), Gaps = 1/208 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF SK+TIGVEF T+++++EGK VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDIT+R TF++V RWL EL+ H+D+ + M+ GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++RAV+ E+ + LAE+EGL F+ETSAL++ NV+ AF+ ++LDIY+ +S+K L +
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 190 STGLPQGTTINVAN-LSGNVKGKACCSN 216
+ + + + N S G +CCS+
Sbjct: 190 ELTVNRVSLVKDDNSASKQSSGFSCCSS 217
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/141 (80%), Positives = 130/141 (92%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRN+F LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+AGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLAGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEK 146
KSDL HLRAV ++A+ AEK
Sbjct: 125 KSDLRHLRAVPTDEARAFAEK 145
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 161/214 (75%), Gaps = 13/214 (6%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF SK+TIGVEF T+++++EGK VKAQIWDTA
Sbjct: 53 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 112
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDIT+R TF++V RWL EL+ H+D+ + M+ GNK DL
Sbjct: 113 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 172
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++RAV+ E+ + LAE+EGL F+ETSAL++ NV+ AF+ ++LDIY+ +S+K L +
Sbjct: 173 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL------N 226
Query: 190 STGLPQGTTINVANL-------SGNVKGKACCSN 216
S T+N +L S G +CCS+
Sbjct: 227 SDTYKDELTVNRVSLVKDDNSASKQSSGFSCCSS 260
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/201 (59%), Positives = 151/201 (75%), Gaps = 4/201 (1%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
V + DY+FK+V+IGDS VGK+ ILSRF +NEFC SKSTIGVEF TR++ + GK +KAQ
Sbjct: 17 VHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQ 76
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQ+FD+V RW+ ELR HADS+IVIM+ G
Sbjct: 77 IWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIG 136
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NK DL R V AEDA AE +GL F ETSAL NVE +F +L +I+ +ISK++L
Sbjct: 137 NKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLEC 196
Query: 185 Q----EAASSTGLPQGTTINV 201
A ++ +G+ I+V
Sbjct: 197 DNGKANADNNVATLKGSKIDV 217
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/201 (59%), Positives = 151/201 (75%), Gaps = 4/201 (1%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
V + DY+FK+V+IGDS VGK+ ILSRF +NEFC SKSTIGVEF TR++ + GK +KAQ
Sbjct: 17 VHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQ 76
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQ+FD+V RW+ ELR HADS+IVIM+ G
Sbjct: 77 IWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIG 136
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NK DL R V AEDA AE +GL F ETSAL NVE +F +L +I+ +ISK++L
Sbjct: 137 NKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLEC 196
Query: 185 Q----EAASSTGLPQGTTINV 201
A ++ +G+ I+V
Sbjct: 197 DNGKANADNNVATLKGSKIDV 217
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 142/191 (74%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
A K+ + DY+FK+V+IGDS VGK+ ILSRFT+NEFC +SKSTIGVEF T+T+ + GK +
Sbjct: 10 AEKLQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLI 69
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQTFD+V RW+ ELR HAD +IVIM
Sbjct: 70 KAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIM 129
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK DL R V EDA AE +GL F ETSA NV AF +L +I ++SK++
Sbjct: 130 LIGNKGDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRS 189
Query: 182 LAAQEAASSTG 192
L G
Sbjct: 190 LECNNGIKGNG 200
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 160/208 (76%), Gaps = 2/208 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF L SK+TIGVEF T++++++GK VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TFD+V RWL EL+ H+D+ + M+ GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++R V E+ + LAE EGL F+ETSAL++ NV+KAF+ ++ +IY+ +S+K L + +
Sbjct: 130 ENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 190 STGLPQGTTINVANLSGNVKG--KACCS 215
L + T +N ++ S + +CCS
Sbjct: 190 ELSLNRVTLVNNSDGSKQSQSYFSSCCS 217
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 159/215 (73%), Gaps = 7/215 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT +EF +ESKSTIGVEFATRT++VE K +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL---- 182
SDL HLRAV ++A+ A + + F ETSAL + NV++AF+ +++ I+ ++SK +
Sbjct: 128 SDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDRAFRELIVAIFQMVSKHQVDLNG 187
Query: 183 AAQEAASSTGLPQGTTINV---ANLSGNVKGKACC 214
+ S G P+G TI++ N K CC
Sbjct: 188 SGTNNGGSNGGPKGPTISLTPAPNEGKKKKSSNCC 222
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 156/213 (73%), Gaps = 7/213 (3%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQIWDTA 71
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++RQTFD++ RWL EL H+D N+V ++ GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
R V + + LAE +GL F+ETSAL++ NV AFQT++ +IY+I+S+K + +QE
Sbjct: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSQELTK 191
Query: 190 STGLP-----QGTTINVANLSGNVKG-KACCSN 216
+P + I NL + + K CCS+
Sbjct: 192 HE-VPRIENGKSVVIQGENLEADGQSKKGCCSS 223
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 153/200 (76%), Gaps = 5/200 (2%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YD LFKIVLIGDSGVGKSN+LSRFT+NEF ++SKSTIGVEFATRTL+++GK +KAQIW
Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL---- 182
SDL HLRAV E+++ A + L F ETSAL + NV+KAF+ ++ IY +SK +
Sbjct: 128 SDLAHLRAVPTEESKTFALENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGD 187
Query: 183 -AAQEAASSTGLPQGTTINV 201
AA A+ G TI++
Sbjct: 188 SAANGNANGMSALNGPTISL 207
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/165 (70%), Positives = 138/165 (83%)
Query: 16 VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYR 75
VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++Q GKT+KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQFGGKTIKAQIWDTAGQERYR 60
Query: 76 AITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAV 135
AITSAYYRGAVGALLVYDI+K T++NVT+WL ELRDH+D +IV+M+ GNK DL HLR V
Sbjct: 61 AITSAYYRGAVGALLVYDISKHSTYENVTQWLHELRDHSDQDIVVMLIGNKCDLRHLRMV 120
Query: 136 AAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
++A+ A +E L F ETSAL+A NV++AF +L D H ++ K
Sbjct: 121 PTDEAREFAMREKLFFTETSALDATNVDEAFVQVLKDAGHNVATK 165
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 160/208 (76%), Gaps = 1/208 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF SK+TIGVEF T+++++EGK VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDIT+R TF++V RWL +L+ H+D+ + M+ GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDQLKIHSDTTVARMLVGNKCDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++RAV+ E+ + LAE+EGL F+ETSAL++ NV+ AF+ ++LDIY+ +S+K L +
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 190 STGLPQGTTINVAN-LSGNVKGKACCSN 216
+ + + + N S G +CCS+
Sbjct: 190 ELTVNRVSLVKDDNSASKQSSGFSCCSS 217
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 158/214 (73%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + D +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A + AE GL FLETSAL++ NVE AFQT+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q + ++ + G G + +ACC
Sbjct: 181 ---KQNSTRTSAITLGNA-QAGQDPGPGEKRACC 210
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 141/189 (74%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
K+ + DY+FK+V+IGDS VGK+ ILSRFT+NEFC +SKSTIGVEF T+T+ + GK +KA
Sbjct: 1 KLQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKA 60
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQTFD+V RW+ ELR HAD +IVIM+
Sbjct: 61 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLI 120
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNK DL R V EDA AE +GL F ETSA NV AF +L +I ++SK++L
Sbjct: 121 GNKGDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLE 180
Query: 184 AQEAASSTG 192
G
Sbjct: 181 CNNGIKGNG 189
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/202 (59%), Positives = 155/202 (76%), Gaps = 4/202 (1%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
IVLIGDSGVGKSN+L R+T+NEF LESKSTIGVEFAT+++Q + KT+KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RA+TSA YRGAVGALLVYDI+K T++NV +WL+ELRD AD +IVIM+ GNKSDL HLR
Sbjct: 61 RAVTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADPSIVIMLVGNKSDLRHLRN 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY-HIISKKALAAQEAASSTGL 193
V E+A+ A++ LSF+ETSA ++ NVE AF TIL +IY +++ ++ ++ SS
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSASQSTNVESAFNTILQEIYKNVVRNTGVSGDDSKSSK-- 178
Query: 194 PQGTTINV-ANLSGNVKGKACC 214
P+G I V + G K K C
Sbjct: 179 PEGGEIVVNVDEGGGDKSKCPC 200
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 158/209 (75%), Gaps = 3/209 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ V VKAQI
Sbjct: 5 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVGDAVVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGAL+V+DITK QT+D V RWL+EL DHA++NIV+M+ GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEANIVVMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL R V E+A++ A+ GL F+ETSAL++ NVE+AF+TIL +I+H + ++ Q
Sbjct: 125 KTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKVQQQ---KQ 181
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
+ S + + + ++ + CC
Sbjct: 182 RNSQSNAVSLANESPESAAAARMEKRQCC 210
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 162/215 (75%), Gaps = 3/215 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + +YLFKIVLIGDS VGKSN+LSRF RNEF SK+TIGVEF T+ ++++GK
Sbjct: 1 MAENGEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKE 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI++R TFD++ RWL+EL DS +
Sbjct: 61 IKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQNDSTVAR 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK DL ++R V+ E+ + LAE+EGL F+ETSAL+A NV+ AF+ ++ +IY+ IS+K
Sbjct: 121 MLVGNKCDLENIREVSTEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYNNISRK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
L + + + + +++ N +G+ +G +CCS
Sbjct: 181 VLNSDSYKAELSVNR---VSLVNGAGSKQGPSCCS 212
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 159/216 (73%), Gaps = 4/216 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
Q + S + G+ G + +ACC N
Sbjct: 181 ---NQNSPRSNAIALGSA-QAGQEPGPGQKRACCIN 212
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 152/205 (74%), Gaps = 6/205 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M D E DYLFK VLIGDS VGKSN+LSRF+R+EF L+SK TIGVEFA R ++V K
Sbjct: 1 MGDSYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKL 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQER+RAITS+YYRGA+GALLVYDIT+R TFDNV +WL ELR++ + +V+
Sbjct: 61 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
++AGNK DL+H R V E+ + LAE EGL F+ETSALE LNVE+AF ++ I+ I S+K
Sbjct: 121 VLAGNKCDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQK 180
Query: 181 AL------AAQEAASSTGLPQGTTI 199
+L A + + LP G +
Sbjct: 181 SLEVRLKDANNITSKTVALPVGKEV 205
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 161/214 (75%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+H R V ++A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSHAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q A + + G+ L G+ + KACC
Sbjct: 181 ---RQNNARANAITLGSAQPGQEL-GSEEKKACC 210
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 153/211 (72%), Gaps = 3/211 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++Y+YLFKIVLIGDS VGK+N+LSRFTR+EF +S++TIGVEFATRTL++ GK +KAQIW
Sbjct: 10 YDYEYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRIKAQIW 69
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+AYYRGAVGAL+VYDI+ ++++V+RWL+E+++HAD+NIVI + GNK
Sbjct: 70 DTAGQERYRAITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADANIVIALVGNK 129
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
SDL HLRAV E+A+ A + L F E SAL A NVE F ++ IY ++SK+ E
Sbjct: 130 SDLEHLRAVPTEEARNFAAEHNLLFTEASALNADNVEFTFHQLIKSIYDMVSKRKFDMDE 189
Query: 187 AASSTGLPQGTTINVANLSGN---VKGKACC 214
+ TI + + K CC
Sbjct: 190 NGVANKDLNSKTITLTPAPKDKKVSKNSNCC 220
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 159/214 (74%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLQQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q ++ + + G+ G + +ACC
Sbjct: 181 ---RQNSSRTNAITLGSA-QAGQEPGPGEKRACC 210
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 160/214 (74%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSRAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q +A + + G+ +G + +ACC
Sbjct: 181 ---RQNSARTNAISLGSA-QAGQEAGPGEKRACC 210
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 158/214 (73%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + D +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A + AE GL FLETSAL++ NVE AFQT+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q + ++ + G G + +ACC
Sbjct: 181 ---KQNSTRTSAITLGNA-QAGQDPGLGEKRACC 210
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 159/214 (74%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + D +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A + AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q + ++ + G+ G + +ACC
Sbjct: 181 ---RQNSTRTSAITLGSA-QAGQDPGPGEKRACC 210
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + +YDYLFK++ GDS VGKSNI+SR TRN F + K T+GVEF T+Q +GKT
Sbjct: 1 MGRRCNEDYDYLFKVMFTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQDKGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+ AQIWDT G ERY + T + YRG GA+LVYDIT+R+TF+NV +WL+ELRDHA+SN VI
Sbjct: 61 IAAQIWDTCGLERYASFTKSCYRGVAGAVLVYDITRRRTFENVGKWLKELRDHANSNPVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL HLR+V+ EDAQ AEKEGL F+ETSA ++ NV+KA Q IL +I+ + S+K
Sbjct: 121 MLIGNKSDLQHLRSVSTEDAQKFAEKEGLLFMETSAFKSTNVDKALQIILQEIHRVFSEK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
L ++E ++ G A N + CC
Sbjct: 181 ELHSEE-SNGVSTQDGKPTFGAKTRTNTQRTGCC 213
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 155/210 (73%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D +YLFKIVLIGDS VGKSN+LSRF RNEF SK+TIGVEF T+T++++GK VKAQI
Sbjct: 6 DGAEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKAQI 65
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TSAYYRGA GAL+VYDI++R TFD++ RWL EL DS + M+ GN
Sbjct: 66 WDTAGQERFRAVTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVARMLVGN 125
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL LR V+ E+ + AE+EGL F+ETSAL++ NV+KAF+ ++ +IY+ IS+K L +
Sbjct: 126 KCDLESLREVSTEEGKAFAEEEGLFFMETSALDSTNVQKAFEIVIREIYNNISRKVLNSD 185
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ + + + +N A N+ +CCS
Sbjct: 186 SYKAELSVNRVSLVNGAGSKKNLLNFSCCS 215
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 157/211 (74%), Gaps = 4/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQI
Sbjct: 6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL+ R V E+A + AE GL FLETSAL++ NVE AFQT+L +I+ +SK+ Q
Sbjct: 126 KSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQ---RQ 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ + + G SG + +ACC N
Sbjct: 183 NSTRANAITLGNA-EAGQDSGPGEKRACCIN 212
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 156/206 (75%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF L SK+TIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TFD+V RWL EL+ H+D+ + +M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++R V+ ED LAE EGL F+ETSAL++ NV++AF+ ++ +IY+ +S+K L + +
Sbjct: 131 ENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKA 190
Query: 190 STGLPQGTTINVANLSGNVKGKACCS 215
+ + + +N + +CCS
Sbjct: 191 ELSVNRVSLVNNGGSKQSEGYLSCCS 216
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 153/212 (72%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK +KAQI
Sbjct: 8 DRSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TSAYYRGAVGALLVYDI+++QTF ++ RWL EL H+D N+V ++ GN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRKQTFHSIGRWLNELHTHSDMNVVTILVGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL +R V + + LAE +GL F+ETSA ++ NV AF+T++ +IY+I+S+K +++Q
Sbjct: 128 KSDLKDIREVPTAEGKALAEAQGLFFMETSARDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 186 E--AASSTGLPQGTTINVAN-LSGNVKGKACC 214
E L G + + + G K CC
Sbjct: 188 ELNKQDPASLSNGKKVVIPSEAQGEAKKGGCC 219
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 159/214 (74%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLHQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q + + + G+ G + +ACC
Sbjct: 181 ---RQNSTRTNAIALGSA-QAGQEPGAGQKRACC 210
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 158/211 (74%), Gaps = 4/211 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQI 65
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+ Q
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ---IQ 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+ S + G+ G + +ACC N
Sbjct: 183 NSPRSNAIALGSA-QAGQEPGPGQKRACCIN 212
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 159/214 (74%), Gaps = 13/214 (6%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF SK+TIGVEF T+++ +EGK VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDIT+R TF++V RWL EL+ H+D+ + M+ GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++RAV+ ++ + LAE EGL F+ETSAL++ NV+ AF+ ++LDIY+ +S+K L +
Sbjct: 130 ENIRAVSVDEGKALAEAEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL------N 183
Query: 190 STGLPQGTTINVANL-------SGNVKGKACCSN 216
S T+N +L S G +CCS+
Sbjct: 184 SDTYKDKLTVNRVSLVKDDNSASKQSSGFSCCSS 217
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 160/215 (74%), Gaps = 6/215 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK- 179
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQ 180
Query: 180 KALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
+ + + A + G QG G+ + +ACC
Sbjct: 181 RQNSTRTNAITLGGAQG-----GQEPGSGEKRACC 210
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 160/214 (74%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q ++ S+ + G+ G+ + + CC
Sbjct: 181 ---RQNSSRSSAITLGSA-QAGQEPGSGEKRTCC 210
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 160/214 (74%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLREIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q A + + G+ L G + +ACC
Sbjct: 181 ---RQNNARTNAITLGSGPTGQEL-GPGEKRACC 210
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/180 (64%), Positives = 141/180 (78%), Gaps = 4/180 (2%)
Query: 39 LESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQ 98
LESKSTIGVEFATR++ V+ K VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+
Sbjct: 3 LESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHV 62
Query: 99 TFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALE 158
TF+NV RW+REL+DH D+NIVIM+ GNK+DL HLRAV+ EDA+ AEKE F+ETSALE
Sbjct: 63 TFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALE 122
Query: 159 ALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
++NVE AF +L IYH++SKKAL + ++ P+G TINV VK ACCS+
Sbjct: 123 SMNVENAFTEVLTQIYHVVSKKALDIGDDPAAP--PKGQTINVGGKDDVSAVKKSACCSS 180
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 155/217 (71%), Gaps = 4/217 (1%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+ D +YD L K+VLIGDSGVGK+N LSRF R EF SK TIGVEFAT+ L +EG +K
Sbjct: 6 RSDDDYDMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDLIKC 65
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAIT+AYYRGAVGALLVYD+T+ +F+++ RWL ELR+HA S++V+M+
Sbjct: 66 QIWDTAGQERYRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVVMLV 125
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNK+DL R V+ + Q LA++EGL F+ETSAL+ NVE+AF + +I+ I+ K+ L
Sbjct: 126 GNKTDLVDQRDVSMQQGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHGIVRKRRLE 185
Query: 184 AQEAASS--TGLPQGTTINVA--NLSGNVKGKACCSN 216
+Q A +P+G +I +A + CCS+
Sbjct: 186 SQAAEDEELAPMPRGISIPIAVQPTQPQQQQSRCCSS 222
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 156/214 (72%), Gaps = 5/214 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DYLFK+VLIGDS VGKSN+LSR+ RNEF + SK+TIGVEF T++++ +GK +KAQI
Sbjct: 4 DPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TSAYYRGAVGAL+VYDI++R TF++V RWL EL+ H+D NIV M+ GN
Sbjct: 64 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL LR V E+++ LAE E L F+ETSAL A NV AFQ ++ ++Y+ +S+KAL +
Sbjct: 124 KCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSD 183
Query: 186 EAASSTGLPQGTTINV-----ANLSGNVKGKACC 214
S + T +++ A +K ACC
Sbjct: 184 SYKSKLLSNRSTKVSLVPNGDAATKTELKKYACC 217
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 161/212 (75%), Gaps = 2/212 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ E++++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRTL ++G VK+QI
Sbjct: 5 EEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDITK Q++++V RWL+EL DHAD++IV+M+ GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGN 124
Query: 126 KSDL-NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
K DL + + V +E+A+ AE+ GL F+ETSAL+A NVE AF++IL DIY + K
Sbjct: 125 KCDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFESILRDIYMRVLKSKGET 184
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
Q+ ++ + + L K ++CC +
Sbjct: 185 QQPSTINLSKEASPTQSITLVTEQK-RSCCQS 215
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 160/214 (74%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q A + + G+ L G + +ACC
Sbjct: 181 ---RQNNARTNAVTLGSGPAGQEL-GPGEKRACC 210
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 157/211 (74%), Gaps = 4/211 (1%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
K + +YDYLFK+VL GDSGVGKSN+L RFT+N+F +SK+TIGVEFATR++ + GK +KA
Sbjct: 3 KAEDDYDYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKIIKA 62
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGA+GA+LVYDIT +Q+F++V RW++E+R++AD +IVIM+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKDIVIMII 122
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNKSDL HLRA+ E Q LA+ ++F+E SA + NV++AF I+ IY ++K+
Sbjct: 123 GNKSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFTQIIQQIYQNLTKQLQK 182
Query: 184 AQEAASSTGLPQGTTINVANLSGNVKGKACC 214
+ + QG +++ + K + CC
Sbjct: 183 YDQMSH----LQGEKLDLEITTSGNKKQGCC 209
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 158/214 (73%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q + + + G G + +ACC
Sbjct: 181 ---RQNSTRTNAITLGGA-QAGQEPGPGEKRACC 210
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 160/214 (74%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRSEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V ++A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q ++ + + G+ G + +ACC
Sbjct: 181 ---RQNSSRTNAITLGSA-QPGQEPGPGEKRACC 210
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 158/214 (73%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 5 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 64
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 65 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 124
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 125 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 184
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q + + + G+ G + +ACC
Sbjct: 185 ---RQNSIRTNAITLGSA-QAGQEPGPGEKRACC 214
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 153/210 (72%), Gaps = 5/210 (2%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVINGKEIKAQIWDTA 71
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGALLVYDI++ QTF ++ RWL EL H+D N+V ++ GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRVQTFQSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE--A 187
+R V + + LAE +GL F+ETSAL++ NV AF+T++ +IY+I+S+K + +QE
Sbjct: 132 KDIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMTSQELNK 191
Query: 188 ASSTGLPQGTTINVANLSGNVK--GKACCS 215
L G + + + G K G CCS
Sbjct: 192 QDPASLSNGKKVVIPS-EGESKTGGGGCCS 220
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 158/214 (73%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q + + + G+ G + +ACC
Sbjct: 181 ---RQNSIRTNAITLGSA-QAGQEPGPGEKRACC 210
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 157/209 (75%), Gaps = 2/209 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF SK+TIGVEF T+ +++EGK VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TF++V RWL EL+ H+D+ + M+ GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
+RAV+ E+ + LAE EGL F+ETSAL++ NV+ AF+ ++ DIY +S+K L + +
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNVSRKQLNSDTYKT 189
Query: 190 STGLPQGTTINVANLSGNVK--GKACCSN 216
+ ++ + G+ + G +CCS+
Sbjct: 190 ELSMKNRVSLVKDDNKGSTQGFGFSCCSS 218
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 158/214 (73%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q + + + G+ G + +ACC
Sbjct: 181 ---RQNSIRTNAITLGSA-QPGQEPGPGEKRACC 210
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 158/209 (75%), Gaps = 3/209 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ V VKAQI
Sbjct: 5 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAVVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGAL+V+DITK QT+D V RWL+EL DHA+++IV+M+ GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVVMLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL R V E+A++ A+ GL F+ETSAL++ NVE+AF+TIL +I++ + K+ Q
Sbjct: 125 KTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQKQ---KQ 181
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
++ S + + + + + CC
Sbjct: 182 RSSQSNTVSLASESPASTAPVQAERRPCC 210
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 145/173 (83%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF + SK+TIGVEF T++L+++ K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSKEVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDIT+R TFD+V+RWL EL+ H D+ + +M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
++RAV+ E+ + LAE +GL F+ETSAL++ NV AF+ ++ +IY+ +S+K L
Sbjct: 131 ENIRAVSIEEGKSLAEAQGLFFMETSALDSTNVRTAFEMVIREIYNNVSRKVL 183
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 160/214 (74%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 IKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q A + + G+ L G + +ACC
Sbjct: 181 ---RQNNARTNAVILGSGPAGQEL-GPGEKRACC 210
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 157/209 (75%), Gaps = 4/209 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+ Q
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ---RQ 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
+ + + G+ G + +ACC
Sbjct: 183 NSTRTNAITLGSA-QAGQEPGPGEKRACC 210
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 147/173 (84%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFK+V+IGDS VGKSN+LSR+ RNEF + SK+TIGVEF T++++++GK VKAQIWDTA
Sbjct: 8 EYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTA 67
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TFD+V RWL EL+ H+++ + M+ GNKSDL
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDL 127
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
++R V+ E+ + LAE EGL F+ETSAL++ NV+KAF+ ++ +IY+ IS+K L
Sbjct: 128 ENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVL 180
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 155/211 (73%), Gaps = 7/211 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D Y+++FK+VLIG+SGVGKSN+LSR+T+NEF +S++TIGVEF+TRT+++ G T+KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFTIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDITK T+D++ RWL+EL +HA++NIV+M+ GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYDSMERWLKELYEHAEANIVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL R+V E+A+ AE L FLE+SALE+ NVE AF +L++I K L
Sbjct: 124 KTDLELERSVPTEEARGFAENHKLLFLESSALESTNVEAAFNNVLMEIQKKTHNKELVQ- 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCSN 216
G +G ++N + + K CC N
Sbjct: 183 ------GANRGVSLNSSKAEIITENKPCCRN 207
>gi|225678958|gb|EEH17242.1| GTP-binding protein yptV1 [Paracoccidioides brasiliensis Pb03]
Length = 222
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 128/223 (57%), Positives = 153/223 (68%), Gaps = 17/223 (7%)
Query: 6 DHEYDYLFKIVL--------IGDSGVGKSNIL----SRFTRNEFCLESKSTIGVEFATRT 53
+ EYD+LFK + S + S I+ RFTRNEF L+SKSTIGVEFATR+
Sbjct: 3 NDEYDFLFKGISPAKFCEGSTAPSTIHTSQIILPMKYRFTRNEFNLDSKSTIGVEFATRS 62
Query: 54 LQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDH 113
+QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD TK+QTF N RWL+ELR+H
Sbjct: 63 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREH 122
Query: 114 ADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDI 173
AD NIVIM+ GNK D H+R V DA A++ LSF+ETSAL+A NVE AFQ IL +I
Sbjct: 123 ADKNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEI 182
Query: 174 YHIISKKALAAQEAASSTGLPQG--TTINVANLSGNVKGKACC 214
Y I+S KAL E SS+ P G I ++ + CC
Sbjct: 183 YRIVSSKAL---ENGSSSQSPLGDRKVIEISKTQDADAKQKCC 222
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 158/207 (76%), Gaps = 2/207 (0%)
Query: 11 YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAG 70
YLFK+V+IGDS VGKSN+LSR+ RNEF L SK+TIGVEF T++L+++ K VKAQIWDT G
Sbjct: 14 YLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTTG 73
Query: 71 QERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLN 130
QER+RA+TSAYYRGAVGAL+VYDI++R TFD+V RWL EL+ H D+ + +M+ GNK DL+
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLD 133
Query: 131 HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASS 190
++R V+ E+ + LAE EGL F+ETSAL++ NV+ AF+ ++ +IY+ +S+K L + +
Sbjct: 134 NIRDVSIEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVLNSDTYKAE 193
Query: 191 TGLPQGTTINVAN-LSGNVKGK-ACCS 215
+ + + +N N S KG +CCS
Sbjct: 194 LSVNRVSLVNNGNSTSKQSKGYFSCCS 220
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 147/173 (84%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFK+V+IGDS VGKSN+LSR+ RNEF + SK+TIGVEF T++++++GK VKAQIWDTA
Sbjct: 95 EYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTA 154
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TFD+V RWL EL+ H+++ + M+ GNKSDL
Sbjct: 155 GQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDL 214
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
++R V+ E+ + LAE EGL F+ETSAL++ NV+KAF+ ++ +IY+ IS+K L
Sbjct: 215 ENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVL 267
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 161/216 (74%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + D +YLFKIVLIGDS VGKSN+LSRF+R+EF SK+TIGVEF T+ +++EGK
Sbjct: 1 MGKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKE 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQER+RA+TSAYYRGA GAL+VYDIT+ TF++V RWL+EL H D+ +
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQ 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK DL +RAV+ E+ + LAE+EGL F+ETSAL+A NV+KAF+ ++ +I++ +S+K
Sbjct: 121 MLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS-GNVKGKACCS 215
L + + + + + +N + S + + +CCS
Sbjct: 181 LLNSDAYKAELSVNRVSLVNNQDGSESSWRNPSCCS 216
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 109/170 (64%), Positives = 141/170 (82%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+ + +YDYLFKIV+IGDSGVGK+NILSRFT++EF +ESK TIGVEFAT+T+ + K +KA
Sbjct: 3 RPEEDYDYLFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLIKA 62
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQE+YRAIT+AYYRGAVGAL ++DITK+ TFDN+ +WL EL+++AD NIVIM+
Sbjct: 63 QIWDTAGQEKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPNIVIMLV 122
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDI 173
GNK DLN RAV EDA AE+ L+++ETSAL++ NV++AFQ + D
Sbjct: 123 GNKCDLNENRAVKTEDASAFAERNQLAYIETSALDSTNVDEAFQRVTRDF 172
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 158/210 (75%), Gaps = 6/210 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLV+D+TK T+ V RWL+EL DHA++ IV+M+ GN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK-KALAA 184
KSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK + +
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQRQNST 185
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACC 214
+ A + G QG G+ + +ACC
Sbjct: 186 RTNAITLGSAQG-----GQEPGSGEKRACC 210
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 210
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 156/210 (74%), Gaps = 6/210 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D Y+++FK+VLIG+SGVGKSN+LSRFT+NEF +S++TIGVEF+TRT++++ T+KAQI
Sbjct: 4 DDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLTIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDI+K T+++ RWL+EL DHAD +IV+M+ GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY-HIISKKALAA 184
KSDL +LR V ++A+ AEK+GL F+ETSAL++ NVE AF +L I+ + S++
Sbjct: 124 KSDLENLRTVPTDEARDFAEKKGLMFMETSALDSTNVEAAFSEVLTAIHTKVASREVTRG 183
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACC 214
+A + P G + + K CC
Sbjct: 184 SISAVTLSSPIGPSSEAQE-----ERKGCC 208
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 155/214 (72%), Gaps = 5/214 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DYLFK+VLIGDS VGKSN+LSR+ RNEF + SK+TIGVEF T++++ +GK +KAQI
Sbjct: 4 DPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TSAYYRGAVGAL+VYDI++R TF++V RWL EL+ H+D NIV M+ GN
Sbjct: 64 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL LR V E+++ LAE E L F+ETSAL A NV AFQ ++ ++Y+ +S+KAL +
Sbjct: 124 KCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSD 183
Query: 186 EAASSTGLPQGTTINV-----ANLSGNVKGKACC 214
+ T +++ A +K ACC
Sbjct: 184 SYKPKLLSNRSTKVSLVPNGDAATKTGLKKYACC 217
>gi|302142935|emb|CBI20230.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 24/200 (12%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK F LESKSTIGVEFATR+++V+ K V
Sbjct: 3 AYRADDDYDYLFK----------------------FSLESKSTIGVEFATRSIRVDDKIV 40
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DS+IVIM
Sbjct: 41 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIM 100
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
+ GNK DL HLRAV+ +DA+ AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 101 LVGNKGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKA 160
Query: 182 LAAQEAASSTGLPQGTTINV 201
L + LP+G TIN+
Sbjct: 161 LDIGD--DPAALPKGQTINM 178
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 146/180 (81%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 157/211 (74%), Gaps = 6/211 (2%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF SK+TIGVEF T+ +++EGK VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TF++V RWL EL+ H+D+ + M+ GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
+RAV+ E+ + LAE EGL F+ETSAL++ NV+ AF+ ++ DIY IS+K L + +
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNSDTYKT 189
Query: 190 STGLPQGTTI----NVANLSGNVKGKACCSN 216
+ ++ N ++ G G +CCS+
Sbjct: 190 ELSMKNRVSLVKDDNKSSTQGF--GFSCCSS 218
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 141/173 (81%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFK+V+IGDS VGKSN+LSR+ RNEF L SK+TIGVEF T+++ ++GK VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGA GALLVYDI++R TFDNV RWL+EL H+D+ + M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
+++R V E+ + LAE EGL F+ETSAL+A NV AF+ ++ +IY +S+K L
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSSVSRKIL 183
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
V + DY+FK+V+IGDS VGK+ ILSRF +NEFC +SK+TIGVEF TRT+ + K +KAQ
Sbjct: 20 VHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQ 79
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQ+FD+V RW+ ELR HADS+IVIM+ G
Sbjct: 80 IWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIG 139
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDI-YHIISKKALA 183
NK DL R V +EDA AE++GL F ETSAL NVE AF +L +I ++SK++L+
Sbjct: 140 NKGDLVDQRVVLSEDAVEFAEEQGLFFSETSALTGENVESAFLKLLQEINTRVVSKRSLS 199
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/145 (74%), Positives = 129/145 (88%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++V+ K +
Sbjct: 3 AYRADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVL 62
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH D+NIV+M
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVM 122
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEK 146
+ GNK+DL HLRAV+ E+ AE+
Sbjct: 123 LVGNKADLRHLRAVSTEETTNFAER 147
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 158/208 (75%), Gaps = 2/208 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF + SK+TIGVEF T+ L+++ K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TFD+V RWL EL+ H D+ + +M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++RAV+ ++ + LAE EGL F+ETSAL++ NV+ AF+ ++ +IY+ +S+K L ++ +
Sbjct: 131 ENIRAVSIDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVIREIYNNVSRKVLNSETYKA 190
Query: 190 STGLPQGTTIN--VANLSGNVKGKACCS 215
+ + + +N A N +CCS
Sbjct: 191 ELSVNRVSLVNNGAATSKQNQTYFSCCS 218
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 155/203 (76%), Gaps = 4/203 (1%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIGDSGVGKSN+LSRFT N+F +ESKSTIGVEFATRT++VEGK +KAQIWDTAGQERY
Sbjct: 28 VVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERY 87
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNKSDL+HLRA
Sbjct: 88 RAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDLDHLRA 147
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V ++A+ A++ L F ETSAL++ NVE AF+ ++ IY ++SK + ++ ++ P
Sbjct: 148 VPTDEARNFAQENQLLFTETSALKSENVELAFRELITAIYQMVSKHQVDLGDSGNNNA-P 206
Query: 195 QGTTINVANLSGNVKGKA---CC 214
+G TI++ K K+ CC
Sbjct: 207 KGPTISLTPAPNEHKKKSSGNCC 229
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 158/209 (75%), Gaps = 4/209 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + +KAQI
Sbjct: 6 EDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQI 65
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL+ R V ++A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+ Q
Sbjct: 126 KSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ---RQ 182
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
+ + + G T + S K KACC
Sbjct: 183 NSTRTNTITLGDTQPGQDPSSGEK-KACC 210
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 161/216 (74%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + D +YLFKIVLIGDS VGKSN+LSRF+R+EF SK+TIGVEF T+ +++EGK
Sbjct: 1 MGKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKE 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAGQER+RA+TSAYYRGA GAL+VYDIT+ TF++V RWL+EL H D+ +
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQ 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK DL +RAV+ E+ + LAE+EGL F+ETSAL+A NV+KAF+ ++ +I++ +S+K
Sbjct: 121 MLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRK 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLS-GNVKGKACCS 215
L + + + + + +N + S + + +CCS
Sbjct: 181 LLNSDAYKAELSVNRVSLVNNQDGSESSWRNPSCCS 216
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 156/212 (73%), Gaps = 7/212 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D Y+++FK+VLIG+SGVGKSN+LSRFT+NEF +S++TIGVEF+TR++QV+ T+KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDITK T+++V RWL+EL DHAD +IV+M+ GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH-IISKKALAA 184
K+DL +R V E+A+ A+ GL F+ETSALE+ NVE AF +L I+ + SK+
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG 183
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+A + G G + + ++CC N
Sbjct: 184 SISAVTLGQTHGPSREFQ------ESRSCCKN 209
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 159/216 (73%), Gaps = 8/216 (3%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V ++A++ AE GL F+ETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTDEARMFAENNGLLFIETSALDSTNVELAFETVLKEIFTKVSKQ 180
Query: 181 ALAAQEAASST--GLPQGTTINVANLSGNVKGKACC 214
A + T G + G+V+ KACC
Sbjct: 181 RQNNSRANAVTLSNAQPGQEL------GSVERKACC 210
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 156/216 (72%), Gaps = 1/216 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA D E DYLFK VLIGDSGVGKSN+LSRF ++EF L+SK TIGVEFA R ++V K
Sbjct: 1 MADAFDEECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKL 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQER+RAITS+YYRGA+GA+LVYDI+ R +++NV++WL ELR+ ++V+
Sbjct: 61 IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
++ GNK DL+ R V E+ + AE EGL F+ETSAL+ LNVE+ F ++ IY + S+K
Sbjct: 121 VLVGNKCDLDESREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQK 180
Query: 181 ALAAQEAASSTGLPQGTTINVAN-LSGNVKGKACCS 215
LAA+ L G I++A+ ++ + CCS
Sbjct: 181 NLAAKMEEQPINLLNGKEIHIADEVTATKQTSTCCS 216
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/173 (64%), Positives = 143/173 (82%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT +EF +ESKSTIGVEFATRT++VE K +KAQIW
Sbjct: 5 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 64
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAG ERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 65 DTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNK 124
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
SDL HLRAV ++A+ A + + F ETSAL + NV+KAF+ +++ I+ ++SK
Sbjct: 125 SDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSK 177
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 157/208 (75%), Gaps = 2/208 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF + SK+TIGVEF T+ L+++ K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TFD+V RWL EL+ H D+ + +M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++RAV+ ++ + LAE EGL F+ETSAL++ NV+ AF+ ++ +IY +S+K L ++ +
Sbjct: 131 ENIRAVSVDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKVLNSETYKA 190
Query: 190 STGLPQGTTIN--VANLSGNVKGKACCS 215
+ + + +N + N +CCS
Sbjct: 191 ELSVNRVSLVNNGASTSKQNQPYFSCCS 218
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 160/214 (74%), Gaps = 4/214 (1%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V ++A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
Q + + + G+ L G + +ACC
Sbjct: 181 ---RQNSIRTNAITLGSAQAGQEL-GPGEKRACC 210
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/174 (63%), Positives = 141/174 (81%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DYLFKIVLIGDS VGKSN+L+RF R+EF SKSTIGVEF T+ + + GK VKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGALLVYDI++RQTFD+V +WL EL H+D N+V ++ GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNVVTILVGNKSDL 131
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
R V+ + + LAE + L F+ETSAL++ NV AFQT++ +IY+I+S+K ++
Sbjct: 132 KDAREVSTAEGKALAETQDLFFMETSALDSSNVTAAFQTVVREIYNILSRKVMS 185
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 198
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 145/199 (72%), Gaps = 1/199 (0%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
IVLIGDSGVGKSN+L R+T+ EF LESKSTIGVEFAT+T+Q + K +KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDNKNIKAQIWDTAGQDRY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RA+TSAYYRGAVGALLVYD++K T++ V +WL+ELRD AD IVIM+ GNKSDL HLR
Sbjct: 61 RAVTSAYYRGAVGALLVYDVSKHSTYEGVDKWLKELRDQADPAIVIMLVGNKSDLRHLRN 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V E+A+ A++ LSF+ETSA + NVE AF TIL +IY + + A E S P
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSAQSSTNVEAAFNTILQEIYKNVVRNT-APAEVDSKGKKP 179
Query: 195 QGTTINVANLSGNVKGKAC 213
+G + G K AC
Sbjct: 180 EGGVVVDVTSGGEKKPCAC 198
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 142/177 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DY+FKIV+ GDSGVGKS +L+RF +NEF ++SK TIGVEF TRT+ ++ K VKAQI
Sbjct: 9 DEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERY+AIT+AYYRGA GALL YDITK+QTFD+V +WL ELR HAD NI++M+ GN
Sbjct: 69 WDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
KSDL+ LRAV E A+ A++EGL FLETSAL++ NVE AF +L +Y +S+K +
Sbjct: 129 KSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHI 185
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/173 (63%), Positives = 138/173 (79%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFK+V+IGDS VGKSN+LSR+ RNEF SK+TIGVEF T+++ +EGK VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKEVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGA GALLVYDIT+R TFDNV RWL+EL H+D+ + M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
+R V E+ + LAE EGL F+ETSAL+A NV AF+ ++ +IY +S+K L
Sbjct: 131 GDIRQVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSNVSRKVL 183
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 155/212 (73%), Gaps = 7/212 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D Y+++FK+VLIG+SGVGKSN+LSRFT+NEF +S++TIGVEF+TR++QV+ T+KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDITK T+++V RWL+EL DHAD +IV+M+ GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH-IISKKALAA 184
K+DL +R V E+A+ A+ GL F+ETSALE+ NVE AF +L I+ + SK+
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG 183
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+A + G G + + + CC N
Sbjct: 184 SISAVTLGQTHGPSREFQ------ESRGCCKN 209
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 146/180 (81%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V ++A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 121 MLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 142/173 (82%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFK+V+IGDS VGKSN+LSR+ RNEF L SK+TIGVEF T+++ ++GK VKAQIWDTA
Sbjct: 13 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 72
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGA GALLVYDI++R TFDNV RWL+EL H+D+ + M+ GNK DL
Sbjct: 73 GQERFRAVTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 132
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
+++R V E+ + LAE EGL F+ETSAL++ NV AF+ ++ +IY+ +S+K L
Sbjct: 133 DNIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYNSVSRKIL 185
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/181 (62%), Positives = 147/181 (81%), Gaps = 1/181 (0%)
Query: 5 VDHE-YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
+DHE DY+FK+V+IGDSGVGKS +L+RF RNEF L+SK+TIGVEF T+T+ ++ K VKA
Sbjct: 8 LDHEGIDYMFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDHKLVKA 67
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERY+AIT+AYYRGA GALL YDITKR TF+++ +WL EL +HAD NIV+M+
Sbjct: 68 QIWDTAGQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADKNIVVMLV 127
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
GNKSDL+ +R V E+A+ LA+++G F+ETSAL++ NVE AF +L IY +SKK +
Sbjct: 128 GNKSDLSSIREVPIEEAEDLAKQKGFFFIETSALDSNNVEPAFLGLLSQIYVTMSKKHIT 187
Query: 184 A 184
A
Sbjct: 188 A 188
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 144/173 (83%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQIWD
Sbjct: 6 DYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD 65
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GNKS
Sbjct: 66 TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKS 125
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
DL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 126 DLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 144/173 (83%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQIWD
Sbjct: 21 DYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD 80
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GNKS
Sbjct: 81 TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKS 140
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
DL+ R V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 141 DLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 193
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 136/180 (75%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M D EYD+LFKIVLIGDSGVGK+NIL RF N+F LESK TIGVEFAT+TLQ GK+
Sbjct: 1 MTRTNDEEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKS 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VK QIWDTAGQERYRAIT+AYYRGAVGA + YD+T+ TF N +WL EL++HAD NIVI
Sbjct: 61 VKCQIWDTAGQERYRAITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEHADGNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
+M GNK+D RAV ++A E++ + F+ETSAL+ N++ AF I+ +I+H I K
Sbjct: 121 IMIGNKTDAVDQRAVRTDEASNFCEQQKIGFIETSALDGTNIDVAFNKIVANIFHTIGSK 180
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 151/208 (72%), Gaps = 4/208 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+YD+L+KIVLIG+SGVGKSN+L RFTRNEF E +STIGVEFATR++Q EGK ++AQIW
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 63
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+AYYRGAVGAL+VYDITK TF ++ RWL EL+D+AD IVIM+ GNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 123
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
+DL R V A+ +K+ L F ETSAL+ NVE AF+++L++I+ + A A +E
Sbjct: 124 ADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFK---QNASAVEE 180
Query: 187 AASSTGLPQGTTINVANLSGNVKGKACC 214
+++ + + + KG CC
Sbjct: 181 SSNDKPTEKPDVVPIEPSPKENKG-GCC 207
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 143/173 (82%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF SK+TIGVEF T+++++EGK VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDI++R TF++V RWL EL+ H+D+ + M+ GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVARWLDELKTHSDTTVARMLVGNKCDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
+++RAV+ E+ + LAE +GL F+ETSAL + NV+ AF+ ++ DIY S+K L
Sbjct: 130 DNMRAVSVEEGKALAETQGLFFMETSALNSTNVKTAFEMVIRDIYANFSRKQL 182
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 152/209 (72%), Gaps = 4/209 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +YD+L+KIVLIG+SGVGKSN+L RFTRNEF E +STIGVEFATR++Q EGK ++AQI
Sbjct: 2 EEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQI 61
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAIT+AYYRGAVGAL+VYDITK TF ++ RWL EL+D+AD IVIM+ GN
Sbjct: 62 WDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGN 121
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K+DL R V A+ +K+ L F ETSAL+ NVE AF+++L++I+ + A A +
Sbjct: 122 KADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFK---QNASAVE 178
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACC 214
E+++ + + + KG CC
Sbjct: 179 ESSNDKPAEKPDVVPIEPSPKENKG-GCC 206
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 151/208 (72%), Gaps = 4/208 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+YD+L+KIVLIG+SGVGKSN+L RFTRNEF E +STIGVEFATR++Q EGK ++AQIW
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 63
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+AYYRGAVGAL+VYDITK TF ++ RWL EL+D+AD IVIM+ GNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 123
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
+DL R V A+ +K+ L F ETSAL+ NVE AF+++L++I+ + A A +E
Sbjct: 124 ADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFK---QNASAVEE 180
Query: 187 AASSTGLPQGTTINVANLSGNVKGKACC 214
+++ + + + KG CC
Sbjct: 181 SSNDKPAEKPDVVPIEPSPKENKG-GCC 207
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/180 (62%), Positives = 142/180 (78%), Gaps = 1/180 (0%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
V + DY+FK+V+IGDS VGK+ ILSRF +NEFC +SK+TIGVEF TRT+ + K +KAQ
Sbjct: 20 VHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQ 79
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQ+FD+V RW+ ELR HADS+IVIM+ G
Sbjct: 80 IWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIG 139
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDI-YHIISKKALA 183
NK D R V +EDA AE++GL F ETSAL NVE AF +L +I ++SK++L+
Sbjct: 140 NKGDFVDQRVVLSEDAVEFAEEQGLFFSETSALTGGNVESAFLKLLQEINTRVVSKRSLS 199
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 139/173 (80%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIVLIGDS VGKSN+L+RF RNEF SK+TIGVEF T+ + +EGK +KAQIWDTA
Sbjct: 12 EYLFKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDTA 71
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDIT+R +FD+V RWL EL H D+ M+ GNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVGNKCDL 131
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
++R V+ E+ + LAE+E L F+ETSAL++ NVE AF+ ++ +IYH +S+K L
Sbjct: 132 ENIREVSREEGKTLAEEESLFFMETSALDSTNVEAAFEVVIREIYHNMSRKTL 184
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 151/207 (72%), Gaps = 2/207 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFK+V+IGDS VGKSN+LSR+ RNEF SK+TIGVEF T+T++++ K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSKEVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGA GALLVYD+++R TFDNV RWL+EL H+D+ + M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++R V E+ + LAE EGL F+ETSAL++ NV AF+ ++ +IY +S+K L + +
Sbjct: 131 ENIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYSSVSRKILNSDSYKA 190
Query: 190 STGLPQGTTINVANLSGNVKGK--ACC 214
L + + N + G +G CC
Sbjct: 191 ELTLNRVSIHNDGSKDGQKQGSRFGCC 217
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 141/175 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ E +YLFKIV+IGDS VGKSN+L+RFTRNEF ++K+TIGV+F T++++++ KT+ AQ
Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQC 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TS YYRGAVGA++VYDIT + +F NVTRWL ELR+ A+ +I+IMM GN
Sbjct: 64 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
KSDL R V ++AQ AE +SFLETSAL + NV ++F+ +L DIYH++S K
Sbjct: 124 KSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSK 178
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 154/210 (73%), Gaps = 10/210 (4%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+L+R+ RNEF SK+TIGVEF T+++ ++GK VKAQIWDTA
Sbjct: 9 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEVKAQIWDTA 68
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDIT+ TF+NV RWL EL H+D+ + M+ GNK DL
Sbjct: 69 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 128
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
+RAV+ E+ + LAE EGL F+ETSAL++ NV+ AF+ ++ +IY IS+K L +
Sbjct: 129 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQL------N 182
Query: 190 STGLPQGTTINVANLSGN----VKGKACCS 215
S + T+N +L N K +CCS
Sbjct: 183 SDSYKEELTVNRVSLVKNENEGTKTFSCCS 212
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 142/177 (80%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DY+FKIV+ GDSGVGKS +L+RF +NEF ++SK TIG+EF TRT+ ++ K VKAQI
Sbjct: 9 DEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMDHKLVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERY+AIT+AYYRGA GALL YDITK+QTFD+V +WL ELR HAD NI++M+ GN
Sbjct: 69 WDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
KSDL+ LRAV E A+ A++EGL FLETSAL++ NVE AF +L +Y +S+K +
Sbjct: 129 KSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHI 185
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 140/173 (80%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFK+V+IGDS VGKSN+LSR+ RNEF L SK+TIGVEF T+++ + GK VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGA GALLVYDI++R TFDNV RWL+EL H+D+ + M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
+++R V E+ + LAE EGL F+ETSAL++ NV AF+ ++ +IY +S+K L
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKIL 183
>gi|221505687|gb|EEE31332.1| Rab 11 protein, putative [Toxoplasma gondii VEG]
Length = 193
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 147/192 (76%), Gaps = 4/192 (2%)
Query: 28 ILSRFTRNEFCLESKSTIGVEFATRTLQV-EGKTVKAQIWDTAGQERYRAITSAYYRGAV 86
+LSRFTR+EF LESKSTIGVEFAT+++ + EGK +KAQIWDTAGQERYRAITSAYYRGAV
Sbjct: 1 MLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAV 60
Query: 87 GALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEK 146
GALLVYDITKRQ+F+NV RWL+ELRDHAD NIVI++ GNKSDL HLRAV+ E+A A +
Sbjct: 61 GALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANR 120
Query: 147 EGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA-AQEAASSTGLPQGTTINVANLS 205
E L+F+ETSAL+A NVE+AF IL +IY + KK + ++ + G Q ++
Sbjct: 121 EHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIEDNPQSTTQPGRGQKIHLDEERTD 180
Query: 206 GNVKG--KACCS 215
++ + CCS
Sbjct: 181 SQIRQSRRGCCS 192
>gi|259089516|ref|NP_001158557.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
gi|225704820|gb|ACO08256.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
Length = 205
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 111/139 (79%), Positives = 126/139 (90%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRN+F LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM A N
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMPADN 124
Query: 126 KSDLNHLRAVAAEDAQILA 144
KSDL HLRAV ++A+ A
Sbjct: 125 KSDLRHLRAVPTDEARAFA 143
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 154/210 (73%), Gaps = 10/210 (4%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+L+R+ RNEF SK+TIGVEF T+++ ++GK VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDIT+ TF+NV RWL EL H+D+ + M+ GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
+RAV+ E+ + LAE EGL F+ETSAL++ NV+ AF+ ++ +IY IS+K L +
Sbjct: 130 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQL------N 183
Query: 190 STGLPQGTTINVANLSGN----VKGKACCS 215
S + T+N +L N K +CCS
Sbjct: 184 SDSYKEELTVNRVSLVKNENEGTKTFSCCS 213
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 147/209 (70%), Gaps = 17/209 (8%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKS IL+RF RNEF ++SK+TIGVEF TRTL ++ K
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK---------- 57
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
YRA+TSAYYRGA+GALLVYDITKRQ+FD++ RWL ELR HAD NIVIM+ GNKSDL
Sbjct: 58 ----YRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 113
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
RAV+ EDA+ AEKE L FLETSAL+A NVE AFQT+L +I+ I SKK +AA A+
Sbjct: 114 EDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAADPKAN 173
Query: 190 STGLPQ--GTTINVANLSGNVKGKACCSN 216
P G + V + + CCS+
Sbjct: 174 GAA-PSLAGKKVVVPGPAQEIPKSKCCSS 201
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 141/173 (81%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFK+V+IGDS VGKSN+LSR+ RNEF L SK+TIGVEF T+++ ++GK VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKDVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGA GALLVYDI++R TFDNV RWL+EL H+D+ + M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
+++R V E+ + LAE EGL F+ETSAL++ NV AF+ ++ +IY +S+K L
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKIL 183
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 155/214 (72%), Gaps = 20/214 (9%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y+++FK+VLIG+SGVGKSN+LSRFT+NEF +S++TIGVEF+TRT+Q+E +KAQIWDT
Sbjct: 7 YNFVFKVVLIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENFIIKAQIWDT 66
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AG ERYRAITSAYYRGAVGALLVYDI+K T+++ RWL+EL DHAD +IV+M+ GNKSD
Sbjct: 67 AGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNKSD 126
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V E+AQ A+++GL F+ETSAL++ NVE AF +L I+ K +A++E
Sbjct: 127 LQSQRTVPTEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTAIH-----KKVASREVT 181
Query: 189 SSTGLPQGTTINVANLSGNV--------KGKACC 214
+I+ LSG + + K CC
Sbjct: 182 RG-------SISAVTLSGPIGLNSEQQEERKGCC 208
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 140/169 (82%), Gaps = 1/169 (0%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV-EGKTVKAQIWD 67
YDYLFKIVLIGD+GVGKSN+L R+T+N+F + S+STIGVEFATR L++ + VKAQIWD
Sbjct: 12 YDYLFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKMGDDCYVKAQIWD 71
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAIT+AYYR AVGAL+VYDI+K +F+N+ +W++ELRDHADSNI I + GNKS
Sbjct: 72 TAGQERYRAITNAYYRNAVGALMVYDISKPNSFENIQKWMQELRDHADSNIAITLIGNKS 131
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHI 176
DL HLRAV EDAQ LA+ + F+ETSAL ++NV+ AF ++ +IY +
Sbjct: 132 DLKHLRAVKFEDAQKLAQTYQIPFIETSALNSMNVDAAFMNLINEIYRL 180
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 140/173 (80%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFK+V+IGDS VGKSN+LSR+ RNEF L SK+TIGVEF T+++ + GK VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGA GALLVYDI++R TFDNV RWL+EL H+D+ + M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
+++R V E+ + LAE EGL F+ETSAL++ NV AF+ ++ +IY +S+K L
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKIL 183
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 157/217 (72%), Gaps = 2/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA D E DYLFK VLIGDSGVGKSN+LSRF ++EF L+SK TIGVEFA R ++V K
Sbjct: 1 MADAFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKL 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAGQER+RAITS+YYRGA+GA+LVYDI++R +++NV++WL ELR+ ++V+
Sbjct: 61 IKAQIWDTAGQERFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVV 120
Query: 121 MMAGNKSDLN-HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
++ GNK DL+ R V E+ + AE EGL F+ETSAL+ LNVE+ F ++ IY + S+
Sbjct: 121 VLVGNKCDLDGQSREVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQ 180
Query: 180 KALAAQEAASSTGLPQGTTINVAN-LSGNVKGKACCS 215
K LAA+ L G I++A+ ++ + CCS
Sbjct: 181 KNLAAKMDEKPINLLNGKEIHIADEVTATKQSSTCCS 217
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 149/208 (71%), Gaps = 4/208 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+YD+L+KIVLIG+SGVGKSN+L RFTRNEF E +STIGVEFATR++Q EGK ++AQIW
Sbjct: 28 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 87
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+AYYRGAVGAL+VYDITK TF ++ RWL EL+D+AD IVIM+ GNK
Sbjct: 88 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 147
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
+DL R + A+ +K+ L F ETSAL+ NVE AF+++L++I+ + A +E
Sbjct: 148 ADLAQTREIEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFK---QNASTVEE 204
Query: 187 AASSTGLPQGTTINVANLSGNVKGKACC 214
++ + + + KG CC
Sbjct: 205 TSNDKPAEKPDVVAIEPSPKESKG-GCC 231
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 154/212 (72%), Gaps = 7/212 (3%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D Y+++FK+VLIG+SGVGKSN+LSRFT+NEF +S++TIGVEF+TR++QV+ T+KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDITK T+++V RWL+EL DHAD +IV+M+ GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH-IISKKALAA 184
K+DL +R V E+A+ A+ L F+ETSALE+ NVE AF +L I+ + SK+
Sbjct: 124 KNDLATVRTVPTEEAKDFADANDLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG 183
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
+A + G G + + + CC N
Sbjct: 184 SISAVTLGQTHGPSREFQ------ESRGCCKN 209
>gi|322694053|gb|EFY85893.1| GTP-binding protein ypt3 [Metarhizium acridum CQMa 102]
Length = 264
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/141 (77%), Positives = 126/141 (89%)
Query: 30 SRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGAL 89
SRFTRNEF L+SKSTIGVEFATR++QV+ KT+KAQIWDTAGQERYRAITSAYYRGAVGAL
Sbjct: 37 SRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGAL 96
Query: 90 LVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGL 149
LVYDI+K QT++NVTRWL+ELRDHAD+NIVIM+ GNKSDL HLRAV ++A+ A + L
Sbjct: 97 LVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTDEAKSFASENHL 156
Query: 150 SFLETSALEALNVEKAFQTIL 170
SF+ETSAL+A NVE AFQ IL
Sbjct: 157 SFIETSALDASNVELAFQNIL 177
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 147/181 (81%), Gaps = 5/181 (2%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D Y++++K+VLIG+SGVGKSN+LSRFT+NEF +S++TIGVEF+TRT+Q++ T+KAQI
Sbjct: 4 DESYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYTIKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDI+K T+++ RWL+EL +HAD +IV+M+ GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL+ LR V +E+AQ AE +G+ F+ETSAL++ NVE AF +L I +K +A+Q
Sbjct: 124 KRDLDTLRTVPSEEAQAFAENKGIMFMETSALDSTNVEAAFNEVLSAI-----QKKVASQ 178
Query: 186 E 186
+
Sbjct: 179 Q 179
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 142/175 (81%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ E +YLFKIV+IGDS VGKSN+L+RFTRNEF ++K+TIGV+F T++++++ K + AQ
Sbjct: 3 EEESEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQC 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TS YYRGAVGA++VYDIT + +F NVTRWL ELR+ A+S+I+IMM GN
Sbjct: 63 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
KSDL R V ++A+ AE +SFLETSAL + NV +AF+T+L DI++++S K
Sbjct: 123 KSDLEMSREVPTKEAKAFAESNKISFLETSALNSTNVNQAFETLLTDIFNLVSSK 177
>gi|74137312|dbj|BAE22024.1| unnamed protein product [Mus musculus]
Length = 193
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 147/213 (69%), Gaps = 31/213 (14%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK ESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFK-------------------------ESKSTIGVEFATRSIQVDGKTIKAQI 39
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHADSNIVIM+ GN
Sbjct: 40 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 99
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL HLRAV ++A+ AEK LSF+ETSA+++ NVE+AF+ IL +IY I+S+K +A +
Sbjct: 100 KSDLRHLRAVPTDEARAFAEKNNLSFIETSAMDSTNVEEAFKNILTEIYRIVSQKQIADR 159
Query: 186 EAASSTGLPQGTTINVA---NLSGNVKGK-ACC 214
A + P ++++ G K CC
Sbjct: 160 AAHDES--PGNNVVDISVPPTTDGQRPNKLQCC 190
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 154/211 (72%), Gaps = 12/211 (5%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIVLIGDS VGKSN+LSRF RNEF SK+TIGVEF T+ ++++GK VKAQIWDTA
Sbjct: 11 EYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGAVGAL+VYDIT+R TFD+ RWL EL H D+ V M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATVRMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-----AA 184
++R V+ E+ + LAE+EGL F+ETSAL++ NV AF+ ++ +IY+ +S+K L A
Sbjct: 131 ENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSRKVLNSDSYKA 190
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ + + L G + + KG +CCS
Sbjct: 191 ELSENRVSLADGG-------ASSKKGFSCCS 214
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 142/201 (70%), Gaps = 28/201 (13%)
Query: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
+IVLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR++QV+ KT+K+QIWDTAGQER
Sbjct: 31 EIVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQER 90
Query: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
YRAITSAYYRGAVGALLVYDI+K QT++NVTRWL+ELRDHADSNIVIM+ GNKSDL HLR
Sbjct: 91 YRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLR 150
Query: 134 AVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGL 193
AV E+A+ A+ I+ I+S KAL + ++A + L
Sbjct: 151 AVPTEEAKQFAK---------------------------IFRIVSSKALDSGDSAQNP-L 182
Query: 194 PQGTTINVANLSGNVKGKACC 214
+ + + CC
Sbjct: 183 SDRKVVEITKTQDPESKQGCC 203
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 155/211 (73%), Gaps = 6/211 (2%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF SK+TIGVE T+ +++EGK VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEIEGKEVKAQIWDTA 69
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
QER+RA+TSAYYRGAVGAL+VYDI++R TF++V RWL EL+ H+D+ + M+ GNK DL
Sbjct: 70 CQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
+RAV+ E+ + LAE EGL F+ETSAL++ NV+ AF+ ++ DIY IS+K L + +
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNSDTYKT 189
Query: 190 STGLPQGTTI----NVANLSGNVKGKACCSN 216
+ ++ N ++ G G +CCS+
Sbjct: 190 ELSMKNRVSLVKDDNKSSTQGF--GFSCCSS 218
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 152/199 (76%), Gaps = 5/199 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-KTVKAQIWD 67
YD++FKIVL+GDSGVGKSN++ RFT+NEF +SKSTIGVEFAT+T+Q+E K VKAQIWD
Sbjct: 6 YDFIFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWD 65
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYR+I S+YYRGAVGALLVYD+T R +F++V WL+E+ ++A+ + +IM+ GNK
Sbjct: 66 TAGQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKM 125
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ-- 185
DL+ R V D + A K GL+F+ETSAL+A V+ AFQ IL +IY +KK L +Q
Sbjct: 126 DLHEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKKQLKSQGG 185
Query: 186 --EAASSTGLPQGTTINVA 202
+A + TG G TI+++
Sbjct: 186 GGKAPAKTGPKAGQTISLS 204
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 11 YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAG 70
YLFKIVLIGDS VGKSN+LSRF RNEF SK+TIGVEF T+ ++++GK VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAG 71
Query: 71 QERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLN 130
QER+RA+TSAYYRGA GAL+VYDI++R TF+++ RWL EL DS + M+ GNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 131 HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASS 190
++R V+ E+ + LAE+EGL F+ETSAL++ NV+ AF+ ++ +IY+ IS+K L + +
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNSDSYKAE 191
Query: 191 TGLPQGTTINVANLSGNVKGKACCS 215
+ + T +N + N+ +CCS
Sbjct: 192 LSVNRVTLVNGSGSKKNM-FSSCCS 215
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 110/182 (60%), Positives = 137/182 (75%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M+ D +YDYLFKIVLIGDSGVGK+NIL RF NEF LESK TIGVEFAT+T Q +GK+
Sbjct: 1 MSRTNDEDYDYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKS 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VK QIWDTAGQER+RAIT+AYYRGAVGA + YDIT+ TF N +WL EL++HAD NIVI
Sbjct: 61 VKCQIWDTAGQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
+M GNK D RAV ++AQ E + + F+ETSAL+ N++ AF I+ +I++ I K
Sbjct: 121 IMIGNKIDAVDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIFNTIGSK 180
Query: 181 AL 182
+
Sbjct: 181 NI 182
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 154/220 (70%), Gaps = 11/220 (5%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ + DYLFKIV+IGDS VGKSN+L+RFTRNEF ++K+TIGV+F T+++++E K + AQ
Sbjct: 4 EEDNDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITAQC 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TS YYRGAVGA++VYDIT + +F NVTRWL ELR+ AD +I+IMM GN
Sbjct: 64 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMADPDILIMMVGN 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL+ R V+ ++AQ A+ +SFLETSAL + NV AF+ +L DIYH +K
Sbjct: 124 KSDLDSAREVSTQEAQSFAQSHKISFLETSALNSSNVNLAFERLLTDIYHHFGQKKQVVM 183
Query: 186 E-------AASSTG---LPQG-TTINVANLSGNVKGKACC 214
+ ++S+G P T ++ + K K CC
Sbjct: 184 DDGQEWLKPSTSSGHKITPLAETPVSSTTSTHQEKKKGCC 223
>gi|168048429|ref|XP_001776669.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671961|gb|EDQ58505.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 161
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/163 (70%), Positives = 133/163 (81%), Gaps = 5/163 (3%)
Query: 55 QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHA 114
QV+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK T++NV RWL+ELRDHA
Sbjct: 1 QVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHA 60
Query: 115 DSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
DSNIVIM+ GNKSDL HLR V+ +DAQ +EKEGLSF+ETSALE+ NVEKAFQ IL +IY
Sbjct: 61 DSNIVIMLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIY 120
Query: 175 HIISKKALAAQEAASSTGLPQGTTINVANLSGNVKG--KACCS 215
I+SKKALA++E ++ G QGT N+ L N K CCS
Sbjct: 121 RIVSKKALASEE-NTTEGPGQGT--NIVPLDSNAPDLKKGCCS 160
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 154/208 (74%), Gaps = 2/208 (0%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
+YLFKIV+IGDS VGKSN+LSR+ RNEF L SK+TIGVEF T+ + ++GK VKAQIWDTA
Sbjct: 7 EYLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKEVKAQIWDTA 66
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGA GALLVYDI++R TF+++ RWL EL+ H D+ + M+ GNK DL
Sbjct: 67 GQERFRAVTSAYYRGAFGALLVYDISRRSTFESIARWLDELKIHCDTTVARMLVGNKCDL 126
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++R V+ E+ + LAE EGL F+ETSAL+A NV+ AF+ ++ +I++ +S+K L + +
Sbjct: 127 ENIRDVSTEEGKNLAEAEGLFFMETSALDATNVKTAFEMVIREIFNNVSRKVLHSDSYKA 186
Query: 190 STGLPQGTTIN--VANLSGNVKGKACCS 215
+ + + +N A N +CCS
Sbjct: 187 ELSVNRVSLVNNGAAASKQNQIYSSCCS 214
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/174 (63%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+EY YLFKIVLIG+ GVGKSN+LSRFTRNEF L+SK TIGVEFAT+ + VEGK VK QIW
Sbjct: 3 NEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIW 62
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAG ER+R S+YYRGA+GALLVYDI+K +T+++V +WL+ LRDHA+ +IVI + GNK
Sbjct: 63 DTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNK 122
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
SDL+H AV ++A+I AE+ +SF+ETSAL+ NVE AF I+ +IY ++S+K
Sbjct: 123 SDLSH--AVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 174
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 144/208 (69%), Gaps = 3/208 (1%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+YDYL+KIVLIG+SGVGKSN+L RFTRNEF E +STIGVEFATR++Q E K ++AQIW
Sbjct: 4 EDYDYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQHEQKVIRAQIW 63
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+AYYRGAVGAL+VYDITK +F ++ RWL EL+D+AD IV+M+ GNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALIVYDITKESSFKSIERWLSELKDNADPKIVVMVVGNK 123
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
+DL+ R V A+ E + L F ETSAL+ NVE AF+ +L++IY + E
Sbjct: 124 ADLSQTREVDESTAKTFCENQKLFFFETSALDGTNVETAFKNLLIEIYK---QNVSNLDE 180
Query: 187 AASSTGLPQGTTINVANLSGNVKGKACC 214
A + + + + N CC
Sbjct: 181 NAQKVPQEKPDIVPIEPVLPNGDKSKCC 208
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 163/223 (73%), Gaps = 13/223 (5%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ E DY+FK+V++GDS VGK+ +L RFT++EF L+SKSTIGVEF TRTL + K VKAQI
Sbjct: 24 EAEIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQI 83
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRA+TSAYYRGA+GA++VYDIT+R+TF+NV RW+ ELR HAD + V+ + GN
Sbjct: 84 WDTAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGN 143
Query: 126 KSDLN-HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
K+D+ R VAA++A AE++GL F E SAL NVE+AF T+L +I+ ++S++AL
Sbjct: 144 KADMPASRREVAADEAARFAEEQGLFFSEASALSGDNVERAFLTLLEEIFAVVSRRALEL 203
Query: 185 QEA-------ASSTGLP---QGTTINVANL--SGNVKGKACCS 215
EA A + G +GTT++V ++ + +K + CS
Sbjct: 204 DEARRMRNGGAGAGGEVLSLKGTTLDVGSIMETSAMKKSSQCS 246
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 156/213 (73%), Gaps = 9/213 (4%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+V+IGDS VGK+ +LSRFT NEFC +SKSTIGVEF TRT+ + GK VKAQIWDTA
Sbjct: 26 DYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTA 85
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GA++VYDITKR +FD+V RW+ ELR HAD + VIM+ GNK+DL
Sbjct: 86 GQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNKADL 145
Query: 130 N-HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH--IISKKALAAQE 186
+ RAV EDA AE + L F E SAL NV++AF +L +I+ ++S+KA+ +
Sbjct: 146 SVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAMESDG 205
Query: 187 AASSTGLPQGTTINVANLS----GNVKGKACCS 215
A T G+ I+V + S N+K +A CS
Sbjct: 206 GA--TVKLDGSRIDVISGSDLETSNIKEQASCS 236
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 152/205 (74%), Gaps = 1/205 (0%)
Query: 11 YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAG 70
YLFKIV+IGDS VGKSN+LSRF RNEF SK+TIGVEF T+ + ++GK +KAQIWDTAG
Sbjct: 14 YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIKAQIWDTAG 73
Query: 71 QERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLN 130
QER+RA+TSAYYRGAVGAL+VYDIT+R +FD+V RWL EL H D+ I M+ GNK DL+
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARMLVGNKCDLD 133
Query: 131 HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASS 190
+R V+ ++ + LAE+E L F+ETSAL++ NVE AF+ ++ +IY+ +S+K L + +
Sbjct: 134 SIREVSRDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKILNSDSYKAE 193
Query: 191 TGLPQGTTINVANLSGNVKGKACCS 215
+ + +N + S G +CC+
Sbjct: 194 LTANRVSLVN-GDTSSKKYGFSCCN 217
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 151/217 (69%), Gaps = 2/217 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA +D + DYLFK VL GDSGVGKSN+LSRF++NEF +S+ TIGVEFA R ++V K
Sbjct: 1 MADSLDEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKL 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
VK QIWDTAGQER+RAITS+YYRGA+GALLVYDIT+ TFDN+ +WLRELR+ + +VI
Sbjct: 61 VKTQIWDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVI 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
++ GNK DL+ R V E+A+ LAE E L F+ETSA + LNVE+AF ++ I+ I S+K
Sbjct: 121 ILVGNKCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQK 180
Query: 181 ALAAQEAASS-TGLPQGT-TINVANLSGNVKGKACCS 215
L + P G I++ ++ CCS
Sbjct: 181 TLDLHKKFEKLVAFPNGKEIISIHEVTPTKHNSNCCS 217
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/163 (64%), Positives = 136/163 (83%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
K D +YDYLFKIVL GDSGVGKSN+L RFT+N+F +SK+TIGVEFATR++ + GK VKA
Sbjct: 3 KADDDYDYLFKIVLSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITISGKVVKA 62
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAIT+AYYRGA+GA+LVYDIT +Q+F+ V +W++E+R++AD +IVIM+
Sbjct: 63 QIWDTAGQERYRAITAAYYRGAIGAVLVYDITNKQSFEAVEQWIQEVRENADKDIVIMII 122
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAF 166
GNKSDL HLRA+ E Q LA+ ++F+E SA + NV++AF
Sbjct: 123 GNKSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAF 165
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 156/216 (72%), Gaps = 15/216 (6%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+V+IGDS VGK+ +LSRFT+NEFC +SKSTIGVEF TRT+ ++GK VKAQIWDTA
Sbjct: 26 DYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTVTLQGKLVKAQIWDTA 85
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GA++VYDITKR +FD+V RW+ ELR HAD + VIM+ GNK+DL
Sbjct: 86 GQERYRAVTSAYYRGALGAMVVYDITKRVSFDHVARWVEELRAHADDSAVIMLVGNKADL 145
Query: 130 N-HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH--IISKKALAAQE 186
RAV EDA AE + L F E SAL NV++AF +L +I+ ++S+KA+
Sbjct: 146 AVDKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAM---- 201
Query: 187 AASSTGLP---QGTTINVANLS----GNVKGKACCS 215
S G P G+ I+V + S +K +A CS
Sbjct: 202 -ESDGGAPVKLDGSRIDVISGSDLEISKIKEQASCS 236
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 111/182 (60%), Positives = 145/182 (79%), Gaps = 1/182 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D DY+FK+V++GDSGVGKS +L+RF RNEF ++SK+TIGVEF T+T+ ++ K VKAQI
Sbjct: 9 DEGIDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMDHKVVKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERY+AIT+AYYRGA GALL YDIT RQ+FD+V +WL ELR HAD NI++M+ GN
Sbjct: 69 WDTAGQERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHAD-NIIVMLVGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL+ RAV E+A+ A+++GL F+ETSAL++ NVE AF +L IY + KK + A+
Sbjct: 128 KSDLSSGRAVPMEEAKDFAKQKGLFFVETSALDSNNVESAFLGLLSQIYATVGKKHIIAE 187
Query: 186 EA 187
A
Sbjct: 188 GA 189
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931 [Arabidopsis
thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 145/190 (76%), Gaps = 1/190 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ E DYLFK VLIGDS VGKSN+LSRF+++EF +SK TIGVEFA R + V K +KAQI
Sbjct: 7 EEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQI 66
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+GALL+YDIT+R TFDN+ +WL ELRD A+ V+++ GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGN 126
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL R V ++ + LAE EGL FLETSALE +NVE+AF ++ I+ +++++ +A++
Sbjct: 127 KSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQR-IASE 185
Query: 186 EAASSTGLPQ 195
++ P
Sbjct: 186 NKSNGAATPH 195
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 149/200 (74%), Gaps = 4/200 (2%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GNKSDL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+ Q ++ + +
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ---RQNSSRTNAIT 177
Query: 195 QGTTINVANLSGNVKGKACC 214
G+ G + +ACC
Sbjct: 178 LGSA-QAGQEPGPGEKRACC 196
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 159/222 (71%), Gaps = 16/222 (7%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE-GKTVKAQIW 66
EYD+LFKIVLIGDSGVGKSN+LSRFT+NEF LESK+TIGVEFAT++ +E G++VK QIW
Sbjct: 9 EYDFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENGQSVKVQIW 68
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+ YYRGAVGALLVYDITK +TF++V RWL+EL +A+S IVI++ GNK
Sbjct: 69 DTAGQERYRAITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAESGIVILLVGNK 128
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA-- 184
+DL+ LR V E+A A + L+F+ETSAL + NV++AF ++ I+ S + +
Sbjct: 129 TDLHKLREVKREEAAEFASLKNLAFIETSALVSSNVDEAFDLLIQQIHKEASSRLIVPDK 188
Query: 185 -----QEAASSTGLPQGTTINVA------NLSGN--VKGKAC 213
+ + S + +G + + N GN V+G+ C
Sbjct: 189 DEQNKNQRSKSMEMKKGKGVQLHEQNQDNNKRGNSKVRGRCC 230
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 149/201 (74%), Gaps = 4/201 (1%)
Query: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
++VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQIWDTAG ER
Sbjct: 36 RVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 95
Query: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
YRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GNKSDL+ R
Sbjct: 96 YRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAR 155
Query: 134 AVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGL 193
V E+A + AE GL FLETSAL++ NVE AFQT+L +I+ +SK+ Q + ++ +
Sbjct: 156 EVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQ---KQNSTRTSAI 212
Query: 194 PQGTTINVANLSGNVKGKACC 214
G G + +ACC
Sbjct: 213 TLGNA-QAGQDPGPGEKRACC 232
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 155/207 (74%), Gaps = 10/207 (4%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
E DY+FK+V++GDS VGK+ +L RFT++EF L+SKSTIGVEF TRTL + K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRA+TSAYYRGA+GA++VYDIT+R+TF+NV RW+ ELR HAD + V+ + GNK+
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 128 DLN-HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
D+ R VAA++A AE++GL F E SAL NV++AF T+L +I+ ++S++AL E
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 187 A-----ASSTGLP----QGTTINVANL 204
A + G+ +GTT+N ++
Sbjct: 198 ARRMRDGGAGGVQVLSLKGTTLNFGSI 224
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 109/170 (64%), Positives = 138/170 (81%), Gaps = 1/170 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
DH YD+LFKIVLIGDSGVGKSN+L R+T+N+F + S+STIGVEFATR++QVE + V+AQI
Sbjct: 9 DH-YDHLFKIVLIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVEDQFVRAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAIT+AYYR AVGALLVYDITK T+ N+ RW+ ELR+HA+ +I +++ GN
Sbjct: 68 WDTAGQERYRAITNAYYRNAVGALLVYDITKYNTYQNIERWITELREHAEYSISVLLVGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH 175
KSDL RAV+ E+A A+ + F+ETSAL+A NVE AF ++ DIY
Sbjct: 128 KSDLKSQRAVSFEEANAYAKNNNIHFIETSALDATNVEIAFVKVIQDIYQ 177
>gi|291233885|ref|XP_002736881.1| PREDICTED: Ras-related protein Rab-11A-like, partial [Saccoglossus
kowalevskii]
Length = 145
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 125/142 (88%), Gaps = 1/142 (0%)
Query: 11 YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAG 70
+ F +VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAG
Sbjct: 1 FFFVVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 60
Query: 71 QERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLN 130
QERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+ GNKSDL
Sbjct: 61 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR 120
Query: 131 HLRAVAAEDAQILAEKEGLSFL 152
HLRAV ++A+ A + SFL
Sbjct: 121 HLRAVPTDEAKAFAGRTN-SFL 141
>gi|268567488|ref|XP_002647794.1| Hypothetical protein CBG23562 [Caenorhabditis briggsae]
Length = 153
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/153 (68%), Positives = 128/153 (83%), Gaps = 1/153 (0%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M+ D EYDYLFK+VL+GDSGVGKSN+LSRFTRN F LE+KSTIGVEFATR++ +EGK
Sbjct: 1 MSNPRDEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKK 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHAD-SNIV 119
+KA IWDTAGQERYRAIT AYYRGA+G L+VYDI K QTF N+ +WL+ELR+HAD SNI
Sbjct: 61 IKATIWDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNIS 120
Query: 120 IMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFL 152
IM+ GNK+DL HLRAV ++A I A++ +SF+
Sbjct: 121 IMLVGNKTDLRHLRAVPTQEAAIYADRNHMSFI 153
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 151/220 (68%), Gaps = 12/220 (5%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ E DYLFKIV+IGDS VGKSN+L+RFTRNEF ++K+TIGV+F T+++++EGK + AQ
Sbjct: 3 EEENDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITAQC 62
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RA+TS YYRGA+GA++VYDIT + +F NVTRWL ELR+ A+ +I++MM GN
Sbjct: 63 WDTAGQERFRAVTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEPDILVMMVGN 122
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA-- 183
KSDL R V+ +AQ AE +SFLETSAL + NV +F+ +L DIY+ +K
Sbjct: 123 KSDLESSREVSTREAQSFAEANKISFLETSALNSTNVNLSFEKLLTDIYNQFGQKKAQVV 182
Query: 184 ---AQEAASSTGLPQGTT------INVANLSGNVKGKACC 214
QE T Q T +NV + K K CC
Sbjct: 183 MDDGQEWLKPTQSGQKITPLNEAPVNVTSTHQEPK-KGCC 221
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 152/210 (72%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ E DYLFK VLIGDSGVGKSN+LSRF ++EF L+SK TIGVEFA R ++V K +KAQI
Sbjct: 9 EEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDIT+R ++++V RWL ELR+ +V+++ GN
Sbjct: 69 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGN 128
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL R V E+A+ AE EGL F+ETSAL+ LNVE+ F ++ I+ I ++++L A+
Sbjct: 129 KCDLGESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAK 188
Query: 186 EAASSTGLPQGTTINVANLSGNVKGKACCS 215
+ L G I++A+ K CCS
Sbjct: 189 MDETPINLSNGKEIHIADEVTATKQAPCCS 218
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/219 (52%), Positives = 151/219 (68%), Gaps = 15/219 (6%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFKIVLIGDSGVGKSN+LSR+T+NEF L SK+TIGVE A R +++EGKTV+AQIWDT
Sbjct: 15 YDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDT 74
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGA+GA+LVYDI K +F N+ +W+ ELR HA ++ I++ GNKSD
Sbjct: 75 AGQERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSD 134
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L HLR + + A + G+ F+ETSAL++ NV +AF+ I I+ + + L +++
Sbjct: 135 LKHLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNEL--EKSG 192
Query: 189 SSTGLPQGTTI----NVANLSGNVKG---------KACC 214
+ P G +I +A L G K+CC
Sbjct: 193 QAHEKPNGESIVIKAELAELPATPNGKEHARTRQSKSCC 231
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 138/175 (78%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D E DYLFK VLIGDS VGKSN+LSRF+R+EF L+SK TIGV+FA R ++V KT+KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+GALL+YDIT+R TF N+ +WL ELR + V+++ GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
KSDL R V E+ + LAE EGL FLETSALE NVE+AF +++ I+ ++++K
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK 181
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 144/181 (79%), Gaps = 1/181 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
E DY+FK+V++GDS VGK+ +L RFT++EF L+SKSTIGVEF TRTL + K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRA+TSAYYRGA+GA++VYDIT+R+TF+NV RW+ ELR HAD + V+ + GNK+
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 128 DLN-HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
D+ R VAA++A AE++GL F E SAL NV++AF T+L +I+ ++S++AL E
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 187 A 187
A
Sbjct: 198 A 198
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 138/171 (80%)
Query: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
+FKIV++GDSGVGKS +L+RF +NEF ++SK TIGVEF TRT+ ++ K VKAQIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNH 131
ERY+AIT+AYYRGA ALL YDITK+QTFD+V +WL ELR H D NI++M+ GNKSDL+
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKNILVMLVGNKSDLSS 120
Query: 132 LRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
LRAV E A+ A++EGL FLETSAL++ NVE AF +L +Y +S+K +
Sbjct: 121 LRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKLI 171
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 150/210 (71%), Gaps = 12/210 (5%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+YD L+K+VLIGDSGVGK+NIL++FTR EF +SK+TIGVEFA++ + ++ KTVKAQIW
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVKAQIW 65
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGA+++YDITK TF+NV +W++EL+++AD ++ IM+ GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNK 125
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
+D H+R VA + A A++ G++F+ETSA + NVE AF+ IL IY +
Sbjct: 126 TDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIY----------KS 175
Query: 187 AASSTGLPQGTTINVA--NLSGNVKGKACC 214
A PQ T VA ++ K CC
Sbjct: 176 AKVVKPTPQPTKFVVADTDVVKPEKSSGCC 205
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 153/211 (72%), Gaps = 1/211 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D + DYLFK VLIGDSGVGKSN++SRF ++EF L+SK TIGVEFA R ++V K +KAQI
Sbjct: 7 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 66
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+G +LVYDIT+R TF NV +WL ELR+ + ++V+++ N
Sbjct: 67 WDTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMVVVLVAN 126
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL R V E+ + AE EGL F+ETSAL+ LNVE+AF ++ I+ IIS+K+L +
Sbjct: 127 KSDLVQSREVEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQKSLETK 186
Query: 186 EAASST-GLPQGTTINVANLSGNVKGKACCS 215
+T +P G I VA+ K CCS
Sbjct: 187 MNGPTTLSVPIGKEIQVADEVTATKQANCCS 217
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 138/175 (78%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ E DYLFK VLIGDS VGKSN+LSRF+++EF +SK TIGVEFA R + V K +KAQI
Sbjct: 7 EEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQI 66
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+GALL+YDIT+R TFDN+ +WL ELRD A+ V+++ GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGN 126
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
KSDL R V ++ + LAE EGL FLETSALE +NVE+AF ++ I+ +++++
Sbjct: 127 KSDLRQSREVEEDEGKTLAESEGLFFLETSALENVNVEEAFLVMIGRIHEVVTQR 181
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 138/175 (78%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D E DYLFK VLIGDS VGKSN+LSRF+R+EF L+SK TIGV+FA R ++V KT+KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+GALL+YDIT+R TF N+ +WL ELR + V+++ GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIGKWLSELRGFSSPETVVVLVGN 126
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
KSDL R V E+ + LAE EGL FLETSALE NVE+AF +++ I+ ++++K
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK 181
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 150/200 (75%), Gaps = 4/200 (2%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GNKSDL+ R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSRE 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V E+A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+ Q A + +
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ---RQNNARTNAVT 177
Query: 195 QGTTINVANLSGNVKGKACC 214
G+ L G + +ACC
Sbjct: 178 LGSGPAGQEL-GPGEKRACC 196
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 138/175 (78%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D E DYLFK VLIGDS VGKSN+LSRF+R+EF L+SK TIGV+FA R ++V KT+KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+GALL+YDIT+R TF N+ +WL ELR + V+++ GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
KSDL R V E+ + LAE EGL FLETSALE NVE+AF +++ I+ ++++K
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK 181
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 136/167 (81%)
Query: 4 KVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
K D E+D++FKIVLIGDS VGKSN+LSRFT+++F + K+TIGVEFATR++ + K +KA
Sbjct: 5 KKDEEHDFIFKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDNKLIKA 64
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERY++IT+AYYRGAVGALL+YDITK +F N+ +WL E+RDHA+ +IVIM+
Sbjct: 65 QIWDTAGQERYKSITTAYYRGAVGALLIYDITKYLSFTNIQKWLNEIRDHAEPHIVIMLV 124
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
GNKSDL HLR V E+A + AE ++F+E SAL++ NVE +F ++
Sbjct: 125 GNKSDLKHLRQVKQEEATLFAENNNIAFIEASALDSSNVELSFYRLI 171
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 138/175 (78%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D E DYLFK VLIGDS VGKSN+LSRF+R+EF L+SK TIGV+FA R ++V KT+KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+GALL+YDIT+R TF N+ +WL ELR + V+++ GN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
KSDL R V E+ + LAE EGL FLETSALE NVE+AF +++ I+ ++++K
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK 181
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 149/200 (74%), Gaps = 4/200 (2%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQIWDTAG ERY
Sbjct: 1 MVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GNKSDL+ R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V E+A + AE GL FLETSAL++ NVE AF+T+L +I+ +SK+ Q + ++ +
Sbjct: 121 VPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ---RQNSTRTSAIT 177
Query: 195 QGTTINVANLSGNVKGKACC 214
G+ G + +ACC
Sbjct: 178 LGSA-QAGQDPGPGEKRACC 196
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/208 (52%), Positives = 151/208 (72%), Gaps = 1/208 (0%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
EYD+L+KIVL+G+SGVGKSN+L RFTRNEF + +STIGVEFATR++ K ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+AYYRGA+GAL+VYDITK+ +F++V +WL EL ++AD +V M+ GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
DLN R V + + LA+K F ETSAL+ NVE+AF T+L IY S K++ ++
Sbjct: 125 CDLNQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYD-DSSKSVDGEQ 183
Query: 187 AASSTGLPQGTTINVANLSGNVKGKACC 214
++++ P I++ + + + K CC
Sbjct: 184 SSNNEIKPATEPIDLGSQNNKPEEKKCC 211
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 147/184 (79%), Gaps = 2/184 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ E DY+FK+V++GDS VGK+ +L+RFTR+EF L+SKSTIGVEF TRTL + K VKAQI
Sbjct: 27 EAEIDYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVKAQI 86
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHAD-SNIVIMMAG 124
WDTAGQERYRA+TSAYYRGA+GA++VYD+T+R TF++V RW+ ELR HAD S+ V+ + G
Sbjct: 87 WDTAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVALIG 146
Query: 125 NKSDLNH-LRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
NK+D+ R VAA++A LAE++GL F E SAL NVE+AF T+L +++ ++S++AL
Sbjct: 147 NKADMPAGRREVAADEAARLAEEQGLFFSEASALTGDNVERAFLTLLEEVFAVVSRRALE 206
Query: 184 AQEA 187
EA
Sbjct: 207 LDEA 210
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/205 (54%), Positives = 150/205 (73%), Gaps = 1/205 (0%)
Query: 11 YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAG 70
YLFKIVLIGDS VGKSN+LSRF RNEF SK+TIGVE T+ ++++GK VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEIDGKEVKAQIWDTAG 71
Query: 71 QERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLN 130
QER+RA+TSAYYRGA GAL+VYDI++R TF+++ RWL EL DS + M+ GNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 131 HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASS 190
++R V+ E+ + LAE+EGL F+ETSAL++ NV+ AF+ ++ +IY+ IS+K L +
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNFDSYKAE 191
Query: 191 TGLPQGTTINVANLSGNVKGKACCS 215
+ + T +N N+ +CCS
Sbjct: 192 LFVNRVTLVNGFGSKKNM-FSSCCS 215
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 156/213 (73%), Gaps = 10/213 (4%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKSN+L+R+ RNEF SK+TIGVEF T+++++ GK VKAQ+WDTA
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGKEVKAQVWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGA+GAL+VYDIT++QTF+N+++WL ELR + S++V M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
++R V+ E+ + LAE E L F+ETSAL + NV+ AFQ ++ +I+ S++ + +
Sbjct: 131 TNIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRR-IVPDDYDK 189
Query: 190 STGLPQGTTINVANLSGNVKGK--------ACC 214
+P+G + + N +G+ K +CC
Sbjct: 190 DDRVPRGQKLGL-NGAGDGKSPQDDATRRFSCC 221
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 148/202 (73%), Gaps = 2/202 (0%)
Query: 1 MAYKVDHE-YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGK 59
MA D E YDYLFK+V+IGDSGVGKSN+L R+T+ +F +ESK+TIGVEFAT++++ + K
Sbjct: 1 MATTRDEEVYDYLFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDK 60
Query: 60 -TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
VKAQIWDTAGQERYRAIT+AYYRGAVGALLVYD+T +F +V+ WL+EL+ +ADSNI
Sbjct: 61 KVVKAQIWDTAGQERYRAITNAYYRGAVGALLVYDVTCMDSFQHVSNWLKELKQYADSNI 120
Query: 119 VIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIIS 178
VI++ GNK+DL R V E+A A++ L+F+ETSAL+ NV+ AF I+ +IY +IS
Sbjct: 121 VILLVGNKTDLKDKREVRKEEAAAYADQHSLAFIETSALDCSNVDLAFDRIINEIYKVIS 180
Query: 179 KKALAAQEAASSTGLPQGTTIN 200
+E QG N
Sbjct: 181 SNPQKDEEEMMMYNKKQGGASN 202
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 142/188 (75%), Gaps = 5/188 (2%)
Query: 31 RFTRNEFCLESKSTIGVEFATRTLQVEG-KTVKAQIWDTAGQERYRAITSAYYRGAVGAL 89
RFTR+EF LESKSTIGVEFAT+++Q++ K +KAQIWDTAGQERYRAITSAYYRGAVGAL
Sbjct: 16 RFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGAL 75
Query: 90 LVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGL 149
LVYDITK+ TF+N+ +WL+ELRD+ADSNIVI++ GNKSDL HLR + DA A+KE L
Sbjct: 76 LVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDATQFAKKEKL 135
Query: 150 SFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLPQGTTINVANLSGNVK 209
+F+ETSALEA NVE AF +L +IY++ KK E + P+G INV + + +
Sbjct: 136 AFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSEDNVNIQ-PRGKKINVDDDNDENE 194
Query: 210 GKA---CC 214
K CC
Sbjct: 195 KKPKTKCC 202
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium distachyon]
Length = 233
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 139/177 (78%), Gaps = 4/177 (2%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+V+IGDSGVGK+ +L RFTR+EFCL+SKSTIG+EF TRT+ + GK VKAQIWDTA
Sbjct: 12 DYVFKVVVIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTVLLAGKRVKAQIWDTA 71
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYRA+TSAYYRGA+GA+LVYD+T+R +F++ RW+ ELR HAD +IV+++ GNK+DL
Sbjct: 72 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFEHAARWVAELRAHADKSIVVVLIGNKADL 131
Query: 130 N----HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
RAV E+A AE++GL F E SAL NVE AF +L +I+ +S++ L
Sbjct: 132 AVAAVGRRAVDVEEATAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRRPL 188
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 155/213 (72%), Gaps = 10/213 (4%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
DY+FK+VLIGDS VGKSN+L+R+ RNEF SK+TIGVEF T+++++ GK VKAQ+WDTA
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGKEVKAQVWDTA 70
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RA+TSAYYRGA+GAL+VYDIT++QTF+N+++WL ELR + S++V M+ GNK DL
Sbjct: 71 GQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDL 130
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
+R V+ E+ + LAE E L F+ETSAL + NV+ AFQ ++ +I+ S++ + +
Sbjct: 131 TDIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRR-IVPDDYDK 189
Query: 190 STGLPQGTTINVANLSGNVKGK--------ACC 214
+P+G + + N +G+ K +CC
Sbjct: 190 DDRVPRGQKLGL-NGAGDGKSPQDDATRRFSCC 221
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 150/210 (71%), Gaps = 12/210 (5%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+YD L+K+VLIGDSGVGK+NIL++FTR EF +SK+TIGVEFA++ + ++ KT+KAQIW
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIKAQIW 65
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGA+++YDITK TF+NV +W++EL+++AD ++ IM+ GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNK 125
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
+D H+R VA + A A++ G++F+ETSA + NVE AF+ IL IY +
Sbjct: 126 TDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIY----------KS 175
Query: 187 AASSTGLPQGTTINVA--NLSGNVKGKACC 214
A PQ T VA ++ K CC
Sbjct: 176 AKVVKPTPQPTKFVVADTDVVKPEKSSGCC 205
>gi|413944912|gb|AFW77561.1| hypothetical protein ZEAMMB73_916842 [Zea mays]
Length = 162
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/162 (69%), Positives = 139/162 (85%), Gaps = 3/162 (1%)
Query: 56 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHAD 115
++GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQ+FDNV RWLRELRDHAD
Sbjct: 1 MDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHAD 60
Query: 116 SNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH 175
S+IVIMM GNKSDL HLRA++ ++ + LAEKEGL FLETSA+EA+NVE+AFQTI+ ++Y
Sbjct: 61 SSIVIMMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYG 120
Query: 176 IISKK-ALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
I+++K A + AA++ LP QG I++ + +GN K +ACCS
Sbjct: 121 IVNRKALAAKEAAAATASLPSQGKIISIDSTAGNTK-RACCS 161
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 140/181 (77%), Gaps = 1/181 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
E DY+FK+V++GDS VGK+ +L RF ++EF L+SKSTIGVEF TRTL + K VKAQIWD
Sbjct: 21 EIDYVFKVVVVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWD 80
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRA+TSAYYRGA+GA++VYD+T+R TFD+V RW+ ELR HAD + V+ + GNK+
Sbjct: 81 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFDHVPRWVEELRAHADGSTVVALVGNKA 140
Query: 128 DLN-HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
D H R V A++A AE++GL F E SAL NVE+AF +L +++ ++S++AL E
Sbjct: 141 DAPAHRREVPADEAARFAEEQGLFFSEASALTGDNVERAFLALLEEVFAVVSRRALELDE 200
Query: 187 A 187
A
Sbjct: 201 A 201
>gi|356531156|ref|XP_003534144.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA6a-like
[Glycine max]
Length = 218
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 154/212 (72%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ-VEGKTVKAQ 64
D DYLFK V IG+SGVGKSN++SRF ++EF L+SK +IGVEFA ++ V K +KAQ
Sbjct: 8 DEHCDYLFK-VXIGESGVGKSNLISRFAKDEFRLDSKPSIGVEFAYGNIKLVRDKLIKAQ 66
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQER+RAITS+YYRGA+GA+LVYDITKR TF NV +WL ELR+ ++V+++
Sbjct: 67 IWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVR 126
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDL+ R V E + AE EGL F+ETSAL+ LNV++AF ++ I+ IIS+K+L
Sbjct: 127 NKSDLDQSRQVEREKGKGFAETEGLCFMETSALQNLNVDEAFXEMITKIHDIISQKSLET 186
Query: 185 QEAASSTGLPQGTTINVAN-LSGNVKGKACCS 215
+ ++ LP G I++A+ ++ + K CCS
Sbjct: 187 KMNGAALNLPSGKEIHIADEVTATKQAKYCCS 218
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 146/200 (73%), Gaps = 4/200 (2%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTVTLGTAAIKAQIWDTAGLERY 60
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLV+D+TK QT+ RWL+EL DHA++ IV+M+ GNKSDL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVAERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTGLP 194
V E+A++ AE GL FLETSAL++ NVE AFQT+L +I +SK+ ++++S T
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFQTVLKEILTKVSKQ----RQSSSRTNAI 176
Query: 195 QGTTINVANLSGNVKGKACC 214
G + +ACC
Sbjct: 177 TLGGAQAGQEQGPGEKRACC 196
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 144/178 (80%), Gaps = 1/178 (0%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV-EGKTVKA 63
+D YDYLFK+V++GDSGVGKSN+L R+T+NEF + S T+G+EFAT+T+Q + + ++A
Sbjct: 1 MDDNYDYLFKLVMLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQTAQNQIIRA 60
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDT GQERYR++TSAYYRGAVGAL+VYD+T +++FDNV WL+ELR A+SNIV+++
Sbjct: 61 QIWDTCGQERYRSLTSAYYRGAVGALMVYDVTSQKSFDNVQVWLKELRQFAESNIVVLLV 120
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
GNK DL R V EDA A+++G++F+ETSALE NV+ AF+ I+ +I+ ++++++
Sbjct: 121 GNKIDLKDKREVRKEDASQFAQEQGIAFIETSALECSNVDIAFERIIYEIHRVVAQQS 178
>gi|242006346|ref|XP_002424012.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507304|gb|EEB11274.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 130
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/123 (84%), Positives = 114/123 (92%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD NIVIM+ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 126 KSD 128
K +
Sbjct: 125 KRE 127
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 150/208 (72%), Gaps = 1/208 (0%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
EYD+L+KIVL+G+SGVGKSN+L RFTRNEF + +STIGVEFATR++ K ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+AYYRGA+GAL+VYDITK+ +F++V +WL EL ++AD +V M+ GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
DL+ R V + + LA+K F ETSAL+ NVE+AF T+L IY S K++ ++
Sbjct: 125 CDLSQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYD-DSSKSVDGEQ 183
Query: 187 AASSTGLPQGTTINVANLSGNVKGKACC 214
+ ++ P I++ + + + K CC
Sbjct: 184 SNTNEIKPATEPIDLGSQNNKPEEKKCC 211
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 154/216 (71%), Gaps = 5/216 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M + + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ +
Sbjct: 1 MGNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
+KAQIWDTAG E YR T YYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+
Sbjct: 61 IKAQIWDTAGLELYRG-TRRYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 119
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDL+ R V ++A++ AE GL FLETSAL++ NVE AF+T+L +I+ +SK+
Sbjct: 120 MLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 179
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
Q + S + G + S K + CC N
Sbjct: 180 ---RQNSTRSIPITLGNAQAGQDPSPGEK-RPCCIN 211
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 150/208 (72%), Gaps = 1/208 (0%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
EYD+L+KIVL+G+SGVGKSN+L RFTRNEF + +STIGVEFATR++ K ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+AYYRGA+GAL+VYDITK+ +F++V +WL EL ++AD +V M+ GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
DL+ R V + + LA+K F ETSAL+ NVE+AF T+L IY S K++ ++
Sbjct: 125 CDLSQTREVQTTEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYD-DSSKSVDGEQ 183
Query: 187 AASSTGLPQGTTINVANLSGNVKGKACC 214
+ ++ P I++ + + + K CC
Sbjct: 184 SNTNEIKPATEPIDLGSQNNKPEEKKCC 211
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 135/168 (80%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFKIVL+GDSGVGKSN+L RF +NEF ++TIGVEF+T+++Q+EG+ VKAQIWDT
Sbjct: 10 YDYLFKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQLVKAQIWDT 69
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRA+T AYYR AVGALL+YDIT RQ+F+N+ +W EL +H+++N V+++ GNK D
Sbjct: 70 AGQERYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTVMILVGNKCD 129
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHI 176
L+ RA+ E+A+ A+ ++F+ETSAL A NV AF+ ++ +I+ I
Sbjct: 130 LSDQRAIKIEEAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEIFKI 177
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 131/166 (78%), Gaps = 1/166 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE-GKTVKAQ 64
DH YDYLFKIVLIGDS VGKSN+L RF + F L+SKSTIGVEFAT+ +Q+ GK KAQ
Sbjct: 4 DHNYDYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKAQ 63
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRAITSAYYRGA GA++VYDI RQ+F +V+RWL EL ++ D+N+VI++AG
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASRQSFQSVSRWLTELNEYGDANMVIVLAG 123
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
NKSDL +LR V+ EDA+ A+ L F ETS L + NVE AF +L
Sbjct: 124 NKSDLVNLREVSTEDAERFAKANNLLFFETSCLNSDNVETAFTELL 169
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 141/183 (77%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
M E +LFKIVLIGDS VGKSNILSRFT+ +F +S+ TIGVEFATR+L GK
Sbjct: 1 MDKPPQQEEKHLFKIVLIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSLTENGKI 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
++AQIWDT GQERY++ITSAYYRGAVGA+L+YDITK++TF+N+ +W++EL+++A++N+V
Sbjct: 61 IQAQIWDTCGQERYKSITSAYYRGAVGAMLIYDITKQKTFENIEKWIQELKEYAETNVVA 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNK+DL R V ++ A AE ++F+E SA + NV+ AF ++ +IY +I+K+
Sbjct: 121 MLIGNKADLKAQRKVPSDKAAQFAENHTMAFMEVSAFDGTNVDLAFSRLINEIYQLINKQ 180
Query: 181 ALA 183
+LA
Sbjct: 181 SLA 183
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 136/175 (77%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
++EYD+LFKI+LIGDSGVGK+NIL RF +NEF L+SK TIGVEF+T+T+ VE K+VK QI
Sbjct: 6 ENEYDFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSVKCQI 65
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAIT+AYYRGAVGA + YDIT+ TF N+ +WL E++++A NIVIMM GN
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFVCYDITREITFTNIEKWLSEIKEYAPKNIVIMMIGN 125
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
K D + R V + +A L ++ + ++ETSA LNVE+AF ++ +I+ +S K
Sbjct: 126 KIDQANDRMVRSVEAAKLCQQNKIGYIETSAQNGLNVEEAFSNLVSEIFSSMSSK 180
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 147/216 (68%), Gaps = 5/216 (2%)
Query: 1 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
MA + EYD+L+KIVL+G+SGVGKSN+L RFTRNEF + +STIGVEFATR++ K
Sbjct: 1 MANTGEDEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKN 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVI 120
++AQIWDTAGQERYRAIT+AYYRGA+GAL+VYDITK+ +F++V RWL EL ++AD ++
Sbjct: 61 IRAQIWDTAGQERYRAITNAYYRGALGALVVYDITKKSSFESVERWLNELHENADRKVLQ 120
Query: 121 MMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
M+ GNKSDLN R V E+ + LAE F ETSAL+ NVE AF T+L IY +
Sbjct: 121 MIIGNKSDLNQTREVTTEEGKKLAEDNKAFFFETSALDGNNVEDAFMTLLKKIY---DES 177
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNV--KGKACC 214
A + + P T+ + + K + CC
Sbjct: 178 AKVVVDEVKTEAKPTADTVVLTHEEPKATEKQQKCC 213
>gi|1619855|gb|AAB16973.1| rab11-like, partial [Caenorhabditis elegans]
Length = 127
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/123 (85%), Positives = 112/123 (91%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++ VEGKTVKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD NIVIM GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGN 124
Query: 126 KSD 128
K D
Sbjct: 125 KCD 127
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/155 (67%), Positives = 132/155 (85%)
Query: 16 VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYR 75
VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ V VKAQIWDTAG ERYR
Sbjct: 1 VLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYR 60
Query: 76 AITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAV 135
AITSAYYRGAVGAL+V+DITK QT+D V RWL+EL DHA+++IV+M+ GNKSDL R V
Sbjct: 61 AITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREV 120
Query: 136 AAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
E+A++ AE +GL F+ETSAL++ NVE+AF+T+L
Sbjct: 121 PTEEAKMFAENKGLLFIETSALDSTNVEEAFETVL 155
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 142/188 (75%), Gaps = 16/188 (8%)
Query: 7 HEYDYLFK--------------IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATR 52
+EY YLFK +VLIG+ GVGKSN+LSRFTRNEF L+SK TIGVEFAT+
Sbjct: 3 NEYYYLFKSNFIFQNFKRQIISVVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATK 62
Query: 53 TLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRD 112
+ VEGK VK QIWDTAG ER+R S+YYRGA+GALLVYDI+K +T+++V +WL+ LRD
Sbjct: 63 IISVEGKAVKVQIWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRD 122
Query: 113 HADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLD 172
HA+ +IVI + GNKSDL+H AV ++A+I AE+ +SF+ETSAL+ NVE AF I+ +
Sbjct: 123 HANEDIVITLVGNKSDLSH--AVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTE 180
Query: 173 IYHIISKK 180
IY ++S+K
Sbjct: 181 IYKLVSEK 188
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/167 (62%), Positives = 136/167 (81%), Gaps = 2/167 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D Y++++K+VLIG+SGVGKSN+LSRFT+NEF +S++TIGVEF+TRT+Q+ TVKAQI
Sbjct: 4 DDSYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYTVKAQI 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAG ERYRAITSAYYRGAVGALLVYDI+K T+++ RWL+EL +HAD +IV+M+ GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGN 123
Query: 126 KSDLNHLRAVAAEDAQIL--AEKEGLSFLETSALEALNVEKAFQTIL 170
K DL +LR V +E L +E +GL F+ETSAL++ NVE AF +L
Sbjct: 124 KRDLENLRTVPSEGGPGLCRSEAKGLMFMETSALDSTNVEAAFNEVL 170
>gi|361128636|gb|EHL00566.1| putative Ras-related protein Rab-11B [Glarea lozoyensis 74030]
Length = 149
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/135 (77%), Positives = 120/135 (88%)
Query: 36 EFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95
+F L+SKSTIGVEFATR++QV+ KT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+
Sbjct: 6 KFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 65
Query: 96 KRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETS 155
K QT++NVTRWL+ELRDHADSNIVIM+ GNKSDL HLRAV E+A+ A + LSF+ETS
Sbjct: 66 KHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETS 125
Query: 156 ALEALNVEKAFQTIL 170
AL+A NVE AFQ IL
Sbjct: 126 ALDASNVELAFQNIL 140
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/156 (66%), Positives = 130/156 (83%)
Query: 15 IVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERY 74
+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQIWDTAG ERY
Sbjct: 33 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 92
Query: 75 RAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRA 134
RAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GNKSDL+ R
Sbjct: 93 RAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 152
Query: 135 VAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
V ++A++ AE GL FLETSAL++ NVE AF+T+L
Sbjct: 153 VPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 188
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/202 (57%), Positives = 155/202 (76%), Gaps = 6/202 (2%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
E DY+FKIV++GDS VGK+ +L RFTR+EF L+SKSTIG+EF TRT+ + VKAQIWD
Sbjct: 2 EEDYVFKIVVVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWD 61
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRA+TSAYYRGA+GA+LVYD+T R+TFD+ TRW+ ELR HAD +IV+M+ GNK+
Sbjct: 62 TAGQERYRAVTSAYYRGALGAMLVYDVTSRRTFDHATRWVAELRAHADKSIVVMLVGNKA 121
Query: 128 DLNH---LRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-A 183
DL RAV A++A AE++GL F E SAL NVE+AF T+L +I+ I+S+K L A
Sbjct: 122 DLARDAGRRAVDADEAAAFAEEQGLFFSEASALSGDNVERAFLTLLREIHAIVSRKTLDA 181
Query: 184 AQEAASSTGL--PQGTTINVAN 203
A E +T + +GT +++A+
Sbjct: 182 AAETGGTTDVLALKGTKLSLAD 203
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 151/208 (72%), Gaps = 1/208 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D E DYLFK VLIGDSGVGKSN+LSRF ++EF L+SK TIGVEFA R ++V K +KAQI
Sbjct: 8 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQER+RAITS+YYRGA+GALLVYDIT+R ++++V RWL ELR+ +V+++ GN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGN 127
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
K DL R V E+A+ AE EGL F+ETSAL+ LNVE+ F ++ I+ I ++++L A+
Sbjct: 128 KCDLGESREVEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAK 187
Query: 186 -EAASSTGLPQGTTINVANLSGNVKGKA 212
+ L G I++A+ K KA
Sbjct: 188 MDETPINHLSNGKEIHIADEVTATKQKA 215
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 128/169 (75%), Gaps = 1/169 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE-GKTVKAQ 64
D YDYLFKIVLIGDS VGKSN+L RF + F L+SKSTIGVEFAT+T+ + GK KAQ
Sbjct: 4 DQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIAKAQ 63
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRAITSAYYRGA+GA++VYDI + +F NV++WL EL D+ADSNI I + G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIIVYDIACKTSFTNVSKWLTELHDYADSNITICLVG 123
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDI 173
NKSDL HLR V ED + A + L F ETS L + NV+ AF+ +L I
Sbjct: 124 NKSDLTHLREVNKEDGEAFARENDLLFFETSCLNSENVDVAFKELLSKI 172
>gi|326523363|dbj|BAJ88722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 163
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/163 (69%), Positives = 136/163 (83%), Gaps = 3/163 (1%)
Query: 55 QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHA 114
Q+EGKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+Q+FDNV RWL ELRDHA
Sbjct: 1 QMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDNVNRWLHELRDHA 60
Query: 115 DSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
DS+IVIMM GNKSDL HLRAV+ + + LAEKEGL FLETSA+EA+NV +AFQTI+ ++Y
Sbjct: 61 DSSIVIMMVGNKSDLTHLRAVSEDQGKALAEKEGLFFLETSAMEAVNVVEAFQTIITEVY 120
Query: 175 HIIS-KKALAAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
I++ K A + AA++ LP QG TI+V + GN K +ACC+
Sbjct: 121 GIVNKKALAAKEAAAAAVPLPSQGKTISVDSTVGNSK-RACCN 162
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 145/175 (82%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
E DY+FK+V+IGDS VGK+ +L RFT++EF ++SKSTIG+EF TRT+++ GK VKAQIWD
Sbjct: 3 EEDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWD 62
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRA+TSAYYRGA+GA+LVYD+T R++F + RWL +LR HAD++IV+M+ GNK+
Sbjct: 63 TAGQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNKA 122
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
DL+H RAVAA++A AE +GL F E SAL NVE+AF +L +I+ I+S+++L
Sbjct: 123 DLSHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSL 177
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/170 (61%), Positives = 129/170 (75%), Gaps = 1/170 (0%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE-GKTVKA 63
++H YDYLFKIVLIGDS VGKSN+L RF + F L+SKSTIGVEFAT+ + ++ GKT KA
Sbjct: 3 LEHNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKA 62
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGA GA++VYDI +Q+F NV+RWL EL ++ D N++I +
Sbjct: 63 QIWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLTELNEYGDPNMIIALV 122
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDI 173
GNKSDL HLR V++ED + A L F ETS L N++ AF +L I
Sbjct: 123 GNKSDLTHLREVSSEDGERYAHSNNLMFFETSCLNNENIDTAFTELLSSI 172
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 143/214 (66%), Gaps = 6/214 (2%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ E + ++K+V+IG+SGVGKSN+L RFTRNEF E K TIGVEFATRT++ EGKT++AQ
Sbjct: 1 MEGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQE+YRAIT AYYRGA GA+ VYD++K+ +FD + RW+ EL++ DS+I IM+ G
Sbjct: 61 IWDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA-LA 183
NK+DL R V D A+K F+ETSALE NVEKAF +L+ IY K A L
Sbjct: 121 NKADLKQEREVNTSDGTEFAQKHSAFFIETSALEGTNVEKAFSDLLIQIYK--KKNATLK 178
Query: 184 AQEAASSTGLP---QGTTINVANLSGNVKGKACC 214
S P + I+ + GK CC
Sbjct: 179 NDSVPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 144/214 (67%), Gaps = 6/214 (2%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ E + ++K+V+IG+SGVGKSN+L RFTRNEF E K TIGVEFATRT++ EGKT++AQ
Sbjct: 1 MEGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQE+YRAIT AYYRGA GA+ VYD++K+ +FD + RW+ EL++ DS+I IM+ G
Sbjct: 61 IWDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA-LA 183
NK+DL R V D A+K F+ETSAL+ NVEKAF +L+ IY K A L
Sbjct: 121 NKADLKQEREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK--KKNATLK 178
Query: 184 AQEAASSTGLP---QGTTINVANLSGNVKGKACC 214
+ S P + I+ + GK CC
Sbjct: 179 SDSVPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 137/172 (79%), Gaps = 2/172 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ YDYLF VLIGD+GVGK+NIL+R+ +NEF ++KST+GVEFA++ + ++ KT+KAQI
Sbjct: 7 EERYDYLF--VLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQERYRAITSAYYRGAVGALLVYDIT R TFDN+ WL EL ++D+++ I++ GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHYSDNDMTIVLVGN 124
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHII 177
K DL +LR + +++A AE+ ++F+ETSA ++ ++KAF+TIL IY I
Sbjct: 125 KCDLANLRVIESQEAVQFAEQHNIAFIETSAYDSTGIDKAFETILSGIYTCI 176
>gi|413950279|gb|AFW82928.1| ras protein Rab11C [Zea mays]
Length = 182
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 128/163 (78%), Gaps = 2/163 (1%)
Query: 55 QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHA 114
QVEGK +KAQIWDTAGQERYRAITSAYYRGA+GA+LVYD++K TF+N++RWL+ELRDHA
Sbjct: 19 QVEGKIIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHA 78
Query: 115 DSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
DSN IM+ GNK+DL HLRAVA +DA+ AE EGLS++ETSALEA NVE+AFQ IL DIY
Sbjct: 79 DSNTRIMLVGNKTDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIY 138
Query: 175 HIISKKALAAQE-AASSTGLPQGTTINVA-NLSGNVKGKACCS 215
+SKK +A+ E A G+ +G TI+VA K CCS
Sbjct: 139 RAVSKKPVASDEVGAGQGGVKEGKTIDVATGADAAAHKKQCCS 181
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 11 YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-KTVKAQIWDTA 69
Y FKIVL+GDSGVGKSN++ RFT+NEF +SKSTIGVEFAT+T+Q+E K VKAQIWDTA
Sbjct: 1 YSFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTA 60
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQERYR+I S+YYRGAVGALLVYD+T R +F++V WL+E+ ++A+ + +IM+ GNK DL
Sbjct: 61 GQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMDL 120
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
+ R V D + A K GL+F+ETSAL+A V+ AFQ IL +IY +KK
Sbjct: 121 HEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKK 171
>gi|125546393|gb|EAY92532.1| hypothetical protein OsI_14270 [Oryza sativa Indica Group]
Length = 168
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/162 (66%), Positives = 128/162 (79%), Gaps = 1/162 (0%)
Query: 55 QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHA 114
QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TK TF+NV RWL+ELRDHA
Sbjct: 6 QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHA 65
Query: 115 DSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
DSNIV+M+ GNK DL HLR+V+ EDA AE+EGLSF+ETSAL+A NV+KAFQT+L +IY
Sbjct: 66 DSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIY 125
Query: 175 HIISKK-ALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
IISKK A + A + + +G +I V+ + CCS
Sbjct: 126 RIISKKALAADEAGAGAGAVREGQSIQVSATDSSSFTSRCCS 167
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 128/169 (75%), Gaps = 1/169 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE-GKTVKAQ 64
D YDYLFKIVLIGDS VGKSN+L RF + F L+SKSTIGVEFAT+ + + GK KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIAKAQ 63
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRAITSAYYRGA+GA++VYDI + +F +V++WL EL D+AD+NI I + G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIIVYDIACKASFSSVSKWLTELHDYADANITICLVG 123
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDI 173
NKSDL HLR VA ED + A + L F ETS L + NV+ AF+ +L I
Sbjct: 124 NKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSKI 172
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 143/214 (66%), Gaps = 6/214 (2%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ E + ++K+V+IG+SGVGKSN+L RFTRNEF E K TIGVEFATRT++ EGKT++AQ
Sbjct: 1 MEGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQE+YRAIT AYYRGA GA+ VYD++K+ +FD + RW+ EL++ DS+I IM+ G
Sbjct: 61 IWDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA-LA 183
NK+DL R V D A+K F+ETSAL+ NVEKAF +L+ IY K A L
Sbjct: 121 NKADLKQEREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK--KKNATLK 178
Query: 184 AQEAASSTGLP---QGTTINVANLSGNVKGKACC 214
S P + I+ + GK CC
Sbjct: 179 NDSVPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 143/214 (66%), Gaps = 6/214 (2%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ E + ++K+V+IG+SGVGKSN+L RFTRNEF E K TIGVEFATRT++ EGKT++AQ
Sbjct: 1 MEGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQE+YRAIT AYYRGA GA+ VYD++K+ +FD + RW+ EL++ DS+I IM+ G
Sbjct: 61 IWDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGRDSDITIMIVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA-LA 183
NK+DL R V D A+K F+ETSAL+ NVEKAF +L+ IY K A L
Sbjct: 121 NKADLKQEREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK--KKNATLK 178
Query: 184 AQEAASSTGLP---QGTTINVANLSGNVKGKACC 214
S P + I+ + GK CC
Sbjct: 179 NDSVPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/197 (56%), Positives = 137/197 (69%), Gaps = 2/197 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT-LQVEGKTVKAQ 64
D YDYL+KIVLIGDS VGKSN+L+R+T+NEF LESKSTIGVEFAT + GK K Q
Sbjct: 4 DDSYDYLYKIVLIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFATNAHILKNGKVCKVQ 63
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRAITSAYYRGAVGAL+ YDIT R +F+NV RWL+ELRD+A + VI + G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALICYDITSRSSFENVKRWLKELRDYAPPHSVICLVG 123
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NK D+ +LR V ++ LA E + FLE SAL++ NV AF ++ IY K
Sbjct: 124 NKVDMVNLRQVTKDEGAKLARLENILFLECSALDSTNVNAAFAELIETIY-TTQAKTTNY 182
Query: 185 QEAASSTGLPQGTTINV 201
+ +S LP IN+
Sbjct: 183 EGMDTSQQLPTCVGINL 199
>gi|1370158|emb|CAA98185.1| RAB11I [Lotus japonicus]
Length = 163
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 130/165 (78%), Gaps = 3/165 (1%)
Query: 51 TRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLREL 110
TR++++ KTVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T++ TF+NV RWL+EL
Sbjct: 1 TRSVRIHDKTVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKEL 60
Query: 111 RDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
RDH D+NIVIM+ GNK+DL HLRAV E+A AE+E F+ETSALE+LNV+ AF +L
Sbjct: 61 RDHTDANIVIMLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVL 120
Query: 171 LDIYHIISKKALAAQEAASSTGLPQGTTINVANLSGNVKGKACCS 215
+IY+++S+K L ++ LPQG TIN+ ++S VK CCS
Sbjct: 121 SEIYNVVSRKTL--EKGNDPGALPQGQTINLGDVSA-VKKPGCCS 162
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/202 (53%), Positives = 141/202 (69%), Gaps = 2/202 (0%)
Query: 16 VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYR 75
VL GDSGVGKSN+LSRF++NEF +S+ TIGVEFA R ++V K VK QIWDTAGQER+R
Sbjct: 1 VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60
Query: 76 AITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAV 135
AITS+YYRGA+GALLVYDIT+ TFDN+ +WLRELR+ + +VI++ GNK DL+ R V
Sbjct: 61 AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120
Query: 136 AAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASS-TGLP 194
E+A+ LAE E L F+ETSA + LNVE+AF ++ I+ I S+K L + P
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180
Query: 195 QGT-TINVANLSGNVKGKACCS 215
G I++ ++ CCS
Sbjct: 181 NGKEIISIHEVTPTKPNSNCCS 202
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 138/195 (70%), Gaps = 2/195 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE-GKTVKAQ 64
D YDYLFKIVLIGDS VGKSN+L RF + F L+SKSTIGVEFAT+ + + GK KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNGKIAKAQ 63
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRAITSAYYRGA+GA++VYDI + +F +V++WL EL D+AD NI I + G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAMGAIVVYDIACKSSFVSVSKWLTELHDYADGNITICLVG 123
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDL HLR VA ED + A + L F ETS L + NV+ AF+ +L I ++ +
Sbjct: 124 NKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSRISEKHTRFDSST 183
Query: 185 QEAASSTGLPQGTTI 199
+ ST +P+ T +
Sbjct: 184 FPVSGST-MPKNTIV 197
>gi|357514495|ref|XP_003627536.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355521558|gb|AET02012.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 216
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/200 (54%), Positives = 142/200 (71%), Gaps = 20/200 (10%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y ++ + DY+FK+V+IGDS VGK+ ILSRF++NE T+ + GK +K
Sbjct: 17 YDMEEKIDYVFKVVVIGDSAVGKTQILSRFSKNE----------------TVTINGKVIK 60
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYDITKRQ+FD+V +W+ ELR HAD++IVIM+
Sbjct: 61 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIML 120
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
GNK DL LR V EDA AE +GL F ETSAL +NVE AF +L +I ++SKKAL
Sbjct: 121 VGNKGDLVDLRMVPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEINSVVSKKAL 180
Query: 183 AAQEAASSTGLP-QGTTINV 201
E + G+ +G+ I+V
Sbjct: 181 ---ECGNVKGIALKGSKIDV 197
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 96/166 (57%), Positives = 133/166 (80%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YD+LFKIVLIGDSGVGKS ++SRFT+++F +E + TIGVEF+T+T+++ K +KAQIWDT
Sbjct: 10 YDFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDT 69
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQERYRAITSAYYRGA GAL+V+DITK+ +F+N+ +W +EL++H+D IV M+ GNK D
Sbjct: 70 AGQERYRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCD 129
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
L R ++ + A A++ +++LETSAL + NVE+AF I+ IY
Sbjct: 130 LADQRNISKDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIY 175
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 131/167 (78%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+YDYL+K+V+IGDSGVGKSN+L RFTR+EF E KSTIGVEF+++ ++ +TV+ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+AYYRGA+GA+LVYD+TK+ +F+++ RWL ELRD+AD +V M+ GNK
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNK 123
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDI 173
DL +R V ++ + +A+K G F ETSAL+ NVE AF I+ I
Sbjct: 124 CDLEQMREVTIKEGEDMAKKIGAFFFETSALDGKNVETAFMAIIQKI 170
>gi|328872576|gb|EGG20943.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 238
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 130/174 (74%), Gaps = 19/174 (10%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYLF TRNEF LE+KSTIGVEFATR+++ EGK +KAQIWD
Sbjct: 9 EYDYLF-------------------TRNEFNLETKSTIGVEFATRSIETEGKIIKAQIWD 49
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAITSAYYRGAVGALLVYDI K+ T+ +V RWL ELR++AD NI IM+ GNK+
Sbjct: 50 TAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEIMLVGNKN 109
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
DL HLR V+ ++A+ AEK LSF+ETSAL++ NVE AFQTIL I H ++++
Sbjct: 110 DLRHLREVSTDEAKDFAEKHKLSFIETSALDSSNVEIAFQTILTQICHSMNRQP 163
>gi|149391443|gb|ABR25739.1| ras-related protein rab11b [Oryza sativa Indica Group]
Length = 165
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 127/166 (76%), Gaps = 4/166 (2%)
Query: 53 TLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRD 112
++ V+ K VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF+NV RW+REL+D
Sbjct: 1 SIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKD 60
Query: 113 HADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLD 172
H D+NIVIM+ GNK+DL HLRAV+ EDA+ AEKE F+ETSALE++NVE AF +L
Sbjct: 61 HTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQ 120
Query: 173 IYHIISKKALAAQEAASSTGLPQGTTINVANLS--GNVKGKACCSN 216
IYH++SKKAL + ++ P+G TINV VK ACCS+
Sbjct: 121 IYHVVSKKALDIGDDPAAP--PKGQTINVGGKDDVSAVKKSACCSS 164
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 131/167 (78%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+YDYL+K+V+IGDSGVGKSN+L RFTR+EF E KSTIGVEF+++ ++ +TV+ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT+AYYRGA+GA+LVYD+TK+ +F+++ RWL ELRD+AD +V M+ GNK
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNK 123
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDI 173
DL +R V+ ++ + +A+K G F ETSA + NVE AF I+ I
Sbjct: 124 CDLEQMREVSIKEGEDMAKKIGAFFFETSAFDGKNVETAFMAIIQKI 170
>gi|225716714|gb|ACO14203.1| Ras-related protein YPTC6 [Esox lucius]
Length = 138
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/117 (84%), Positives = 111/117 (94%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYD+LFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
WDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVIM+
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 137/177 (77%)
Query: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
D L+K+V+IGDSGVGKSN+++RFT+N+F ++K TIGVEF ++++ +G T+K QIWDTA
Sbjct: 4 DVLYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWDTA 63
Query: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDL 129
GQER+RAI++AYYRGA GAL+VYDIT +++FDN+ +W +E+ + ++ + ++ GNK DL
Sbjct: 64 GQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGCINILVGNKCDL 123
Query: 130 NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
NHLR V + AEK +SF+ETSAL++ NV++AF T+L +IY S+K+ +E
Sbjct: 124 NHLRQVETATGRAFAEKHNVSFMETSALDSTNVDEAFTTLLKEIYKTQSRKSKKPEE 180
>gi|323309207|gb|EGA62432.1| Ypt32p [Saccharomyces cerevisiae FostersO]
Length = 153
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/135 (71%), Positives = 118/135 (87%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
++YDYLFKIVLIGDSGVGKSN+LSRFT +EF +ESKSTIGVEFATRT++VE K +KAQIW
Sbjct: 8 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 67
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAITSAYYRGAVGAL+VYDI+K +++N WL ELR++AD N+ + + GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNK 127
Query: 127 SDLNHLRAVAAEDAQ 141
SDL HLRAV ++A+
Sbjct: 128 SDLAHLRAVPTDEAK 142
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 124/167 (74%), Gaps = 1/167 (0%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV-EGKTVKA 63
+D YDYLFKIVLIGDS VGKSN+L RF + F L+SKSTIGVEFAT+ + + GK KA
Sbjct: 3 LDQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKA 62
Query: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMA 123
QIWDTAGQERYRAITSAYYRGA GA++VYDI +Q+F NV+RWL EL ++ D+N++I +
Sbjct: 63 QIWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALV 122
Query: 124 GNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
GNKSDL HLR V ED + A+ L F ETS L N++ F +L
Sbjct: 123 GNKSDLTHLREVTYEDGERYAKSNNLIFFETSCLSNENIDTTFTELL 169
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 141/190 (74%), Gaps = 7/190 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
E DY+FK+V+IGDSGVGK+ +L RFTR +FCL+SKSTIG+EF TRT+ + + VKAQIW
Sbjct: 2 EEPDYVFKVVVIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIARRRVKAQIW 61
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+R +F + RW+ ELR HAD +IV+ + GNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTRRDSFGHAARWVAELRAHADKSIVVALVGNK 121
Query: 127 SDL----NHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
+DL R V A++A+ AE++GL F E SAL NVE AF +L +I+ +S+K L
Sbjct: 122 ADLATAAPARREVRADEAEAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRKPL 181
Query: 183 AAQEAASSTG 192
EAA G
Sbjct: 182 ---EAARGNG 188
>gi|378755008|gb|EHY65036.1| GTP-binding protein ypt3 [Nematocida sp. 1 ERTm2]
Length = 210
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EY+YL+KIVLIGDSGVGK+N+L R N F +KSTIGVEF T+ V GK +KAQI
Sbjct: 9 EQEYEYLYKIVLIGDSGVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKAQI 68
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV-TRWLRELRDHADSNIVIMMAG 124
WDTAGQERYRAITSAYYRGAVGA++VYDI++++TFDN T W+++L+D+++S +VI + G
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGAIVVYDISRKETFDNARTEWIKQLKDNSESGLVISLVG 128
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH 175
NK+DLN R V+ ++A+ A+ G ETSAL +NV++AF+T++ IY
Sbjct: 129 NKTDLNEKRQVSLQEAREAAQIGGYQLTETSALSDVNVQEAFETLIQKIYQ 179
>gi|145533477|ref|XP_001452483.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420182|emb|CAK85086.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 142/212 (66%), Gaps = 3/212 (1%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +YD L KI+++GDSGVGK+N+++RF + +F +SK T+GVEF R + + GKT+KAQ+
Sbjct: 4 EEDYDILMKIIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQV 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQE++RAIT YYRGA+GA++ YDITK Q+F NV RW+ ELR+H DSN+V+M+ G
Sbjct: 64 WDTAGQEKFRAITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGT 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
KSDL R V ED A + ++FLETSAL+A NV KAF +L IY I + Q
Sbjct: 124 KSDLESKRVVRNEDGTQKALQHNMAFLETSALKAANVGKAFSMLLEKIYVGIDNQGKEYQ 183
Query: 186 EAASSTGLPQGTTI-NVANLSGNV--KGKACC 214
+ AS + TI N N + K CC
Sbjct: 184 KRASIKLTSEPITIKNAQNTKPDTTKSKKQCC 215
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 132/195 (67%), Gaps = 16/195 (8%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+ DY+FK+V+IGDS VGK+ +LSRF +NEFC +SKSTIGVEF TRT+ + GK +KAQIW
Sbjct: 35 QKIDYVFKVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKAQIW 94
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRA+TSAYYRGA+GA+LVYDITKRQTFD+V RW+ ELR HAD++IVIM+ GNK
Sbjct: 95 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWIEELRSHADNSIVIMLIGNK 154
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
DL R V + + G FL I ++SK++L +
Sbjct: 155 GDLVDQRVVHTDKCCGVCRGSGPFFLRD----------------FKINKVVSKRSLESNN 198
Query: 187 AASSTGLPQGTTINV 201
++ +G+ I++
Sbjct: 199 GKNNIATLKGSKIDI 213
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 132/167 (79%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+YDY +KIV+IGDSGVGK+NI+++FTR EF E+K+T+GVEFA + L ++ K +KAQ+WD
Sbjct: 6 DYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKAQLWD 65
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAI S+YY+GA GAL+V+DITK+ TFDNV RW++E+++ + I I++ GNKS
Sbjct: 66 TAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMKEVQESTSNEISIILVGNKS 125
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY 174
DL HLR V+++ + A K ++FLETSA + NV +AF ++ +I+
Sbjct: 126 DLRHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLINEIH 172
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 122/166 (73%), Gaps = 1/166 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE-GKTVKAQ 64
+ YDYLFKIVLIGDS VGKSN+L RF + F L+SKSTIGVEFAT+ + ++ GK KAQ
Sbjct: 3 EQTYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAKAQ 62
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQERYRAITSAYYRGA GA++VYDI +Q+F NV+RWL EL ++ D N++I + G
Sbjct: 63 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDPNMIIALVG 122
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
NKSDL HLR V ED + A L F ETS L N++ F +L
Sbjct: 123 NKSDLTHLREVTFEDGERYARSNNLLFFETSCLNNENIDTTFGELL 168
>gi|429965625|gb|ELA47622.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 207
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFKIVLIGDSGVGK+N+LS+ TR EF E+K+TIGVEFATRT +++ +KAQIWDT
Sbjct: 4 YDYLFKIVLIGDSGVGKTNLLSQLTRGEFSAETKATIGVEFATRTFKIDNLVIKAQIWDT 63
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTR-WLRELRDHADSNIVIMMAGNKS 127
AGQERYRAITSAYYRG +GAL+VYDIT++ T N T+ WL +L++++ I IMM GNK+
Sbjct: 64 AGQERYRAITSAYYRGTLGALIVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMMVGNKT 123
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH 175
DL R V A+ L+FLETSAL+ NVEKAF ++ +Y
Sbjct: 124 DLEDERTVTVACGNDAAKSNNLNFLETSALDGSNVEKAFDELIKAVYR 171
>gi|440494412|gb|ELQ76793.1| GTPase Rab11/YPT3, small G protein superfamily [Trachipleistophora
hominis]
Length = 207
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 132/178 (74%), Gaps = 3/178 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFKIVLIGDSGVGK+N+LS+ TR EF E+K+TIGVEFAT+T +++ +KAQIWDT
Sbjct: 4 YDYLFKIVLIGDSGVGKTNLLSQLTRKEFSAETKATIGVEFATKTFKIDSLVIKAQIWDT 63
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTR-WLRELRDHADSNIVIMMAGNKS 127
AGQERYRAITSAYYRG +GAL+VYDIT++ T N T+ WL +L++++ I IM+ GNK+
Sbjct: 64 AGQERYRAITSAYYRGTLGALVVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMLVGNKT 123
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185
DL R V A+ L+FLETSAL+ NVEKAF+ ++ +Y +KAL +
Sbjct: 124 DLEDERTVTVACGNDAAKSNNLNFLETSALDGSNVEKAFEELIKAVYR--KRKALDPE 179
>gi|430811332|emb|CCJ31255.1| unnamed protein product [Pneumocystis jirovecii]
Length = 144
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/132 (74%), Positives = 116/132 (87%), Gaps = 1/132 (0%)
Query: 39 LESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQ 98
LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQERYRAITSAY GAVGALLVYDI+K+
Sbjct: 12 LESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYV-GAVGALLVYDISKQT 70
Query: 99 TFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALE 158
TF+N+ RWL+ELRDHADSNIVIM+ GNKSDL HLRAV+ +D + + GLSF+ETSAL+
Sbjct: 71 TFENIQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVSTDDGKNFSTTNGLSFIETSALD 130
Query: 159 ALNVEKAFQTIL 170
+ NV+ AFQ IL
Sbjct: 131 STNVDCAFQDIL 142
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 144/213 (67%), Gaps = 11/213 (5%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++++GKT+K Q
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL E+ +A N+ ++ G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDL + V E A+ A++ G+ FLETSA A NVE+AF T+ +I K +A+
Sbjct: 121 NKSDLASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI-----KNRMAS 175
Query: 185 QEAASSTGLPQGTTINVANLSGNV--KGKACCS 215
Q A SST P NV NL G + CCS
Sbjct: 176 QPALSSTSKPN----NVTNLRGQAIPQKSGCCS 204
>gi|297740535|emb|CBI30717.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 117/164 (71%), Gaps = 25/164 (15%)
Query: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Y+ + +YDYLFK+ SKSTIGVEFATR+L V+GK +
Sbjct: 3 GYRAEDDYDYLFKV-------------------------SKSTIGVEFATRSLNVDGKVI 37
Query: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELRDH D NIV+M
Sbjct: 38 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM 97
Query: 122 MAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKA 165
+ GNKSDL HL AV+ ED + AE+E L F+ETSALEA N+ A
Sbjct: 98 LIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNLFPA 141
>gi|157865435|ref|XP_001681425.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
gi|68124721|emb|CAJ02862.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
Length = 208
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 138/211 (65%), Gaps = 7/211 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
E + FKIVLIGDSGVGKSN+++R+T NEF E+ STIGVEF T+++++E + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIESRDAKIQIW 61
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQER+RAI+ + Y GA GA+LVYDIT + +FD++ WL+ELR + I + GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
DL HLR V E A A + GLSFLETSALE NV+KAF+ + +Y ++
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALERTNVDKAFEWLAKSVYEVV---VTPQTR 178
Query: 187 AASSTGLPQGTTINVANLSGNVKGK---ACC 214
A T QG T+N+ N S + + K CC
Sbjct: 179 EADRTAPKQGRTVNM-NPSESQEAKKSGGCC 208
>gi|401416870|ref|XP_003872929.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322489155|emb|CBZ24407.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 208
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 138/211 (65%), Gaps = 7/211 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
E + FKIVLIGDSGVGKSN+++R+T NEF E+ STIGVEF T++++++ + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIW 61
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQER+RAI+ + Y GA GA+LVYDIT + +FD++ WL+ELR + I + GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
DL HLR V E A A + GLSFLETSALE NV+KAF+ + +Y ++
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYEVV---VTPQTR 178
Query: 187 AASSTGLPQGTTINVANLSGNVKGK---ACC 214
A T QG T+N+ N S + + K CC
Sbjct: 179 EADRTAPKQGRTVNM-NPSESPEAKKSSGCC 208
>gi|146079278|ref|XP_001463744.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|398011473|ref|XP_003858932.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
gi|134067831|emb|CAM66111.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|322497143|emb|CBZ32214.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
Length = 208
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 138/211 (65%), Gaps = 7/211 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
E + FKIVLIGDSGVGKSN+++R+T NEF E+ STIGVEF T++++++ + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIW 61
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQER+RAI+ + Y GA GA+LVYDIT + +FD++ WL+ELR + I + GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
DL HLR V E A A + GLSFLETSALE NV+KAF+ + +Y ++
Sbjct: 122 CDLEHLRVVKKEAADRFARENGLSFLETSALERTNVDKAFEWLAKSVYEVV---VTPQTR 178
Query: 187 AASSTGLPQGTTINVANLSGNVKGK---ACC 214
A T QG T+N+ N S + + K CC
Sbjct: 179 EADRTAPKQGRTVNM-NPSESPETKKTSGCC 208
>gi|349804351|gb|AEQ17648.1| putative member ras oncogene protein 1 [Hymenochirus curtipes]
Length = 116
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 96/113 (84%), Positives = 106/113 (93%), Gaps = 1/113 (0%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNI 118
WDTAGQERYRAITSAYYRGA GALLVYDI K T++NV RWL+ELRDHAD+NI
Sbjct: 65 WDTAGQERYRAITSAYYRGA-GALLVYDIAKHLTYENVERWLKELRDHADNNI 116
>gi|440297845|gb|ELP90486.1| rab11, putative [Entamoeba invadens IP1]
Length = 222
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 134/204 (65%), Gaps = 3/204 (1%)
Query: 11 YLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAG 70
+ ++V+IG+SGVGKSN+L RFTRNE+ E K TIGVEFATRT++ +GKT++AQIWDTAG
Sbjct: 21 FSLEVVIIGESGVGKSNLLLRFTRNEYEPEKKFTIGVEFATRTIEYDGKTIRAQIWDTAG 80
Query: 71 QERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLN 130
QE+YRAIT AYYRGA GA+ VYD++K+ TF + RW+ EL+ ++VIM+ GNKSDL
Sbjct: 81 QEKYRAITDAYYRGAEGAVCVYDVSKKDTFTAIDRWMTELKAGCGDDVVIMIVGNKSDLE 140
Query: 131 HLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASS 190
R V + + A++ F+ETSAL NVEKAF +L+ IY K E +
Sbjct: 141 QERDVKPSEGEEFAQRHNSFFMETSALTGNNVEKAFTELLVHIYK--KKNTTITPEKTAE 198
Query: 191 TGLPQ-GTTINVANLSGNVKGKAC 213
T P +N+ S K K C
Sbjct: 199 TQKPSVEDRVNINKQSSEEKKKCC 222
>gi|312377320|gb|EFR24177.1| hypothetical protein AND_11405 [Anopheles darlingi]
Length = 1044
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 93/127 (73%), Positives = 109/127 (85%)
Query: 56 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHAD 115
V+GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWLRELRDHAD
Sbjct: 6 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD 65
Query: 116 SNIVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYH 175
NIVIM+ GNKSDL HLRAV ++A+ AE+ GLSF+ETSAL++ NVE AFQ IL +IY
Sbjct: 66 QNIVIMLVGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYR 125
Query: 176 IISKKAL 182
I+S+K +
Sbjct: 126 IVSQKQI 132
>gi|74831376|emb|CAI39292.1| rab_C68 [Paramecium tetraurelia]
Length = 174
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 125/165 (75%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ +YD L KI+++GDSGVGK+N+++RF + +F +SK T+GVEF R + + GKT+KAQ+
Sbjct: 4 EEDYDILMKIIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQV 63
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGN 125
WDTAGQE++RAIT YYRGA+GA++ YDITK Q+F NV RW+ ELR+H DSN+V+M+ G
Sbjct: 64 WDTAGQEKFRAITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGT 123
Query: 126 KSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
KSDL R V ED A + ++FLETSAL+A NV KAF +L
Sbjct: 124 KSDLESKRVVRNEDGTQKALQHNMAFLETSALKAANVGKAFSMLL 168
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 146/211 (69%), Gaps = 9/211 (4%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ +YDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++ +GKT+K Q
Sbjct: 1 MNQDYDYLFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQER+R ITS+YYRGA G ++VYD+T +Q+FDNV +WL E+ +A N+V ++ G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQWLNEIDRYASDNVVKILVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDL + V++E A+ A++ G+ FLETSA + NVE+AF T+ +I KK +A+
Sbjct: 121 NKSDLTSNKVVSSETAKAFADEIGIPFLETSAKNSTNVEQAFMTMAAEI-----KKRVAS 175
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCS 215
Q A+++T + TT+ K CCS
Sbjct: 176 QPASNAT---RPTTVPXRXXXXXQKSN-CCS 202
>gi|226507848|ref|NP_001151959.1| ras-related protein Rab11A [Zea mays]
gi|195651361|gb|ACG45148.1| ras-related protein Rab11A [Zea mays]
gi|223945145|gb|ACN26656.1| unknown [Zea mays]
gi|414886383|tpg|DAA62397.1| TPA: Ras protein Rab11A [Zea mays]
Length = 248
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 140/186 (75%), Gaps = 1/186 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
E DY+FK+V++GD+ VGK+ +L+RF R+EF L+SK TIGVEF TRTL + K VK QIWD
Sbjct: 26 EIDYVFKVVVVGDAAVGKTQLLARFARDEFALDSKPTIGVEFQTRTLTLHRKRVKTQIWD 85
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRA+TSAYYRGA+GA++VYD+T+R TF++V RW+ ELR HAD + V+ + GNK+
Sbjct: 86 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSTVVALIGNKA 145
Query: 128 DLNHL-RAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
D+ R V A++A LAE +GL F E SAL NVE+AF T+L +++ +S++AL E
Sbjct: 146 DMPAARREVPADEAARLAEDQGLFFSEASALTGDNVERAFLTLLEEVFAAVSRRALELDE 205
Query: 187 AASSTG 192
A G
Sbjct: 206 ARRMRG 211
>gi|384501465|gb|EIE91956.1| hypothetical protein RO3G_16667 [Rhizopus delemar RA 99-880]
Length = 187
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 132/184 (71%), Gaps = 1/184 (0%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
+D EYDYL+K+VL GDSGVGKSN++SRF RNEF L + T GV+F T+TL + VKAQ
Sbjct: 1 MDDEYDYLYKLVLTGDSGVGKSNVVSRFARNEFDLVYRKTYGVDFTTKTLGTDNHIVKAQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
+ DTAG+ER+R I +A+YR A GA +VYDIT R +F+NV WLR++R++AD N VIM+ G
Sbjct: 61 LCDTAGEERFRVIITAFYRNAAGAFIVYDITSRSSFENVHIWLRKIREYADPNAVIMLVG 120
Query: 125 NKSDLNH-LRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALA 183
NK DL+ R V E+ ++LAE+EGL F+ETSAL+A N++ AF ++ I S K
Sbjct: 121 NKVDLSKSSREVETEEGRLLAEEEGLLFIETSALDATNIDAAFTILISKICSNFSTKTQG 180
Query: 184 AQEA 187
E+
Sbjct: 181 CPES 184
>gi|387592730|gb|EIJ87754.1| GTPase Ypt3 [Nematocida parisii ERTm3]
gi|387595356|gb|EIJ92980.1| GTPase Ypt3 [Nematocida parisii ERTm1]
Length = 206
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 140/211 (66%), Gaps = 11/211 (5%)
Query: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
+ EY+YL+KIVLIGDS VGK+N+L R N F +KSTIGVEF T+ V GK +KAQI
Sbjct: 5 EQEYEYLYKIVLIGDSSVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKAQI 64
Query: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNV-TRWLRELRDHADSNIVIMMAG 124
WDTAGQERYRAITSAYYRGAVGA++VYDIT++++FDN T W+++L+D+++S +VI + G
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGAIVVYDITRKESFDNARTEWIKQLKDNSESGLVISLVG 124
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NK+DL R V+ ++A+ A+ ETSAL +NV++AF+ ++ IY
Sbjct: 125 NKTDLEEKRQVSQQEAREAAQIGDYLLTETSALSDVNVQEAFEALIKKIYQT-------- 176
Query: 185 QEAASSTGLPQGTTINVANLSG-NVKGKACC 214
A P+ + IN+ + S CC
Sbjct: 177 -RTAERNNGPKPSIINLEDDSSMKASSSWCC 206
>gi|72078956|ref|XP_782537.1| PREDICTED: ras-related protein Rab-2A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 212
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 135/210 (64%), Gaps = 4/210 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R TF+++T WL + R H+ SN+VIM+ GNKSD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V E+ + A + GL F+ETSA A NVE+AF +IY I + A
Sbjct: 123 LEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQEGVFDINNEA 182
Query: 189 SSTGL-PQGTTINVANLSGN---VKGKACC 214
+ L PQ T+N A SG+ G+ CC
Sbjct: 183 NGIKLGPQHNTVNPAQPSGDRGQQGGQGCC 212
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 125/158 (79%)
Query: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
F +VLIGDS VGK+NILSRF +EF L+SK+T+GVEF+ + ++V +KAQIWDTAGQE
Sbjct: 18 FVVVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQE 77
Query: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHL 132
RYR+ITSAYYRGAVGAL+VYDIT R +F+NV WL ELR H+D ++V+++ GNK DL +
Sbjct: 78 RYRSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCDLANQ 137
Query: 133 RAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
R+++ ++A+ AEK ++F+ETSA E +++AF +L
Sbjct: 138 RSISTDEARAYAEKHNMAFIETSAYERTGIDEAFTMVL 175
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/213 (49%), Positives = 144/213 (67%), Gaps = 12/213 (5%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT+++EGKTVK Q
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQER+R ITS+YYRGA G ++VYD+T ++F+NV +WL E+ +A+ N+ ++ G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLNEIDRYANENVNKLLVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDL RAV E A+ A++ G+ FLETSA A NVE+AF T+ +I K +A+
Sbjct: 121 NKSDLTAKRAVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI-----KTRMAS 175
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKA---CC 214
Q A + P+G T+ G GKA CC
Sbjct: 176 QPALNQG--PKGATVRPG--EGRPVGKANSQCC 204
>gi|348531422|ref|XP_003453208.1| PREDICTED: ras-related protein Rab-2A-like [Oreochromis niloticus]
Length = 212
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 134/210 (63%), Gaps = 4/210 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R TF+++T WL + R H++SN+VIM+ GNKSD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V E+ + A + GL F+ETSA A NVE+AF +IY I + A
Sbjct: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
Query: 189 SSTGL-PQGTTIN---VANLSGNVKGKACC 214
+ + PQ T N +N G+ G CC
Sbjct: 183 NGIKIGPQHPTTNSTLSSNQGGHQAGGGCC 212
>gi|66807211|ref|XP_637328.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122086021|sp|Q54KM9.1|RB11B_DICDI RecName: Full=Ras-related protein Rab-11B
gi|2708641|gb|AAB92559.1| GTPase rab11b [Dictyostelium discoideum]
gi|60465730|gb|EAL63807.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 220
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 130/172 (75%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
EYDYL KIV+IGDSGVGKSN+LSR+ +NEF + STIGVEF+T+TL+++ K +K Q+WD
Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWD 66
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQE+Y +IT +YY+GA+GAL+VY+I R +F+N+ +WL++ R++A + IM+ GNKS
Sbjct: 67 TAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKS 126
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISK 179
DL R V+ + + AEK + F+ETSAL++ NVE AF + IY+ + K
Sbjct: 127 DLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIYYSLFK 178
>gi|74833680|emb|CAI39320.1| rab_C09 [Paramecium tetraurelia]
Length = 212
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 128/163 (78%), Gaps = 1/163 (0%)
Query: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWD 67
+YDY +KIV+IGDSGVGK+NI+++FTR EF E+K+T+GVEFA + L ++ K +KAQ+WD
Sbjct: 6 DYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKAQLWD 65
Query: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKS 127
TAGQERYRAI S+YY+GA GAL+V+DITK+ TFDNV RW++ +++ + I I++ GNKS
Sbjct: 66 TAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMK-VQESTSNEISIILVGNKS 124
Query: 128 DLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTIL 170
DL HLR V+++ + A K ++FLETSA + NV +AF ++
Sbjct: 125 DLRHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLI 167
>gi|321478009|gb|EFX88967.1| hypothetical protein DAPPUDRAFT_304738 [Daphnia pulex]
Length = 212
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 133/210 (63%), Gaps = 4/210 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R TF+++T WL + R H++SN+VIM+ GNKSD
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V E+ + A + GL F+ETSA A NVE+AF +IY I + A
Sbjct: 123 LESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAREIYEKIQEGVFDINNEA 182
Query: 189 SSTGL-PQGTTINVANLSGNV---KGKACC 214
+ L PQ N SG +G ACC
Sbjct: 183 NGIKLGPQHLPSNANTPSGGASASQGGACC 212
>gi|442759119|gb|JAA71718.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 207
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 93/184 (50%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YD+LFK++LIGDSGVGK++IL RF+ N+F STIG++F R ++++GK +K QIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIWDT 64
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQER+R IT+AYYRGA+G +LVYD+TK TF+N+ W+R +HA +++ M+ GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTKENTFENIKTWIRNTDEHAAADVEKMILGNKCD 124
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
+N LR V+ E + LA + G+ F+ETSA+ ++NVE AF T+ DI + +K +AAQ
Sbjct: 125 MNDLRQVSRERGEKLAVEHGIKFMETSAVSSINVEDAFYTLARDIKEKMERK-VAAQAQP 183
Query: 189 SSTG 192
+G
Sbjct: 184 KPSG 187
>gi|158294114|ref|XP_556035.3| AGAP005393-PA [Anopheles gambiae str. PEST]
gi|157015414|gb|EAL39812.3| AGAP005393-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 132/211 (62%), Gaps = 5/211 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++T WL + R H++SN+VIM+ GNKSD
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L+ R V E+ + A + GL F+ETSA A NVE+AF +IY I + A
Sbjct: 123 LDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEA 182
Query: 189 SSTGL-----PQGTTINVANLSGNVKGKACC 214
+ + P ++ N G CC
Sbjct: 183 NGIKIGQQHSPTSPSLGSGNSPGGPASSGCC 213
>gi|440291835|gb|ELP85077.1| rab11, putative [Entamoeba invadens IP1]
Length = 211
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 135/210 (64%), Gaps = 2/210 (0%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+YD L+K V++GDSG GK+ +L RFTRNEF E KSTIGVEF+++ +Q + V+ QIW
Sbjct: 2 EDYDVLYKTVMMGDSGAGKTCLLMRFTRNEFDAEKKSTIGVEFSSKQIQYKDSAVRIQIW 61
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQERYRAIT AYYRG++GA++VYD+TK+ +F+ + RW EL ++ D ++V M+ GNK
Sbjct: 62 DTAGQERYRAITGAYYRGSLGAVMVYDVTKKSSFEALDRWHNELIENGDKSVVKMVIGNK 121
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
DL +R V E+A+ A+K G F ETSA++ NVEKAF ++ I +K A +
Sbjct: 122 CDLEQMREVTTEEAEEFAKKTGSYFFETSAMDGTNVEKAFMQMIETICDRQFEKKAAEAK 181
Query: 187 AASSTGLPQGTTINVANLSGNVKGKA--CC 214
A L + I + K CC
Sbjct: 182 PAQKPFLEERVVIEDPQVPQEPPKKKFQCC 211
>gi|449677940|ref|XP_002159779.2| PREDICTED: ras-related protein Rab-11B-like, partial [Hydra
magnipapillata]
Length = 162
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/162 (60%), Positives = 119/162 (73%), Gaps = 7/162 (4%)
Query: 58 GKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSN 117
GK +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+N
Sbjct: 1 GKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYENVERWLKELRDHADAN 60
Query: 118 IVIMMAGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHII 177
IVIM+ GNKSDL HLRAV E+A+ AEK LSF+ETSAL++ NVE AF+ IL +IYHI+
Sbjct: 61 IVIMLVGNKSDLRHLRAVPTEEAKAFAEKNELSFIETSALDSTNVEVAFRNILEEIYHIV 120
Query: 178 SKKALAAQEAASSTGLPQGTTINVANLSGNV-----KGKACC 214
S+K + A++ TG + ++ V K CC
Sbjct: 121 SQKQI--HNASNRTGNQPSDNVQTIQVAPTVEIDQRKSVKCC 160
>gi|56756457|gb|AAW26401.1| SJCHGC06657 protein [Schistosoma japonicum]
Length = 213
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 130/211 (61%), Gaps = 5/211 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R TF ++T WL + R H+ SN+VIM+ GNKSD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFTHLTTWLEDARQHSSSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V E+ + A + GL F+ETSA A NVE AF I+ I + AL A
Sbjct: 123 LESRRDVQKEEGEAFAREHGLVFMETSAKTAANVEDAFINTAKCIHDKIQEGALDVNNEA 182
Query: 189 SSTGL-----PQGTTINVANLSGNVKGKACC 214
+ L P G N N++ G CC
Sbjct: 183 NGIKLGPHHNPVGGVYNNNNMTNRTSGAGCC 213
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 136/194 (70%), Gaps = 1/194 (0%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFKIVL+GD GVGK+ I +R+T +EF +SKSTIGVEFA +T+ + G +K QIWDT
Sbjct: 3 YDYLFKIVLVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDIKGQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
+G+ERYRAITSAYYRG+VGA+LV+D+TK ++F+++ W +LR +AD NIV+ + GNK D
Sbjct: 63 SGEERYRAITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVGNKID 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V+ +A+ A G ++ETSAL+ VE AF+ + I+ I+ + A ++
Sbjct: 123 L-PTREVSTVEAERFARGNGFFYMETSALDGTGVENAFRQVTKKIFEIVDSRQQARKKTV 181
Query: 189 SSTGLPQGTTINVA 202
++ + Q +I +
Sbjct: 182 RASSIGQTRSIKLG 195
>gi|154333217|ref|XP_001562869.1| putative small GTP-binding protein Rab11 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059874|emb|CAM37302.1| putative small GTP-binding protein Rab11 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 208
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 135/205 (65%), Gaps = 7/205 (3%)
Query: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
FKIVLIGDSGVGKSN+++R+T +EF E+ STIGVEF T+++++E + K QIWDTAGQE
Sbjct: 8 FKIVLIGDSGVGKSNLMTRYTMSEFSQETPSTIGVEFMTKSIKIEDRDAKIQIWDTAGQE 67
Query: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHL 132
R+RAI+ + Y GA GA+LVYDIT + +FD++ WL+ELR I + GNK DL HL
Sbjct: 68 RFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPVTCCIFLIGNKCDLEHL 127
Query: 133 RAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTG 192
R V E A A + GLSFLETSALE NV+KAF+ + +Y ++ + Q +
Sbjct: 128 RVVKKEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYEVV----VTPQTREADRT 183
Query: 193 LPQ-GTTINV--ANLSGNVKGKACC 214
+P+ G T+N+ S K CC
Sbjct: 184 VPKPGRTVNMNPGETSEVKKSGGCC 208
>gi|71410719|ref|XP_807641.1| small GTP-binding protein Rab11 [Trypanosoma cruzi strain CL
Brener]
gi|70871685|gb|EAN85790.1| small GTP-binding protein Rab11, putative [Trypanosoma cruzi]
Length = 217
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 137/214 (64%), Gaps = 16/214 (7%)
Query: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
FK+V+IGDSGVGKSN+++R+T NEF ++ +TIGVEF T+++++EG+ K QIWDTAGQE
Sbjct: 8 FKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQE 67
Query: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHL 132
R+RAI+ + Y GA GA+LVYDIT + +FD++ WL+ELR + I + GNK DL HL
Sbjct: 68 RFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCSIFLIGNKCDLEHL 127
Query: 133 RAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTG 192
R V E A A + GLSFLETSALE NVEKAF+ + +Y ++ +A +AA
Sbjct: 128 RVVKKEVADRFARENGLSFLETSALEKTNVEKAFEWLAKSVYDLV----VAPVDAAGGRR 183
Query: 193 LPQGTTINV---ANLSGNVKGKA---------CC 214
P N NL + G+A CC
Sbjct: 184 PPLNAAANAKRPVNLGASNDGQAAGKKENTSRCC 217
>gi|410930247|ref|XP_003978510.1| PREDICTED: ras-related protein Rab-2A-like [Takifugu rubripes]
Length = 212
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 136/211 (64%), Gaps = 6/211 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R TF+++T WL + R H++SN+VIM+ GNKSD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V E+ + A + GL F+ETSA A NVE+AF +IY I + A
Sbjct: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
Query: 189 SSTGL-PQGTTINVANLSGNVKGK----ACC 214
+ + PQ T N + LSG+ G+ CC
Sbjct: 183 NGIKIGPQHPTTN-STLSGSQGGQHAGGGCC 212
>gi|340055447|emb|CCC49766.1| Rab11A GTPase [Trypanosoma vivax Y486]
Length = 219
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 127/185 (68%)
Query: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
FK+V++GDSGVGKSN+++R+T NEF ++ +TIGVEF T+++++EG+ K QIWDTAGQE
Sbjct: 8 FKVVIVGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQE 67
Query: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHL 132
R+RAI+ + Y GA GA+LVYDIT + +FD++ WL+ELR + I + GNK DL HL
Sbjct: 68 RFRAISRSIYHGAKGAVLVYDITNQTSFDSIPTWLQELRAFVPATCSIFLIGNKCDLEHL 127
Query: 133 RAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTG 192
R V E A A + GLSFLETSALE NV+KAF+ + +Y ++ A AA
Sbjct: 128 RVVKKEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYDVVVAPVEVASGAAGGKR 187
Query: 193 LPQGT 197
P T
Sbjct: 188 APLNT 192
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 142/211 (67%), Gaps = 8/211 (3%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++ +GKT+K Q
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL E+ +A N+ ++ G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NK DL R V+ E + LA++ G+ FLETSA +A NVEKAF T+ +I K +A+
Sbjct: 121 NKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI-----KNRMAS 175
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCS 215
Q AAS P + +S + +CCS
Sbjct: 176 QPAASGASRPATVQMRGQPVS---QQSSCCS 203
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 132/211 (62%), Gaps = 5/211 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++T WL + R H++SN+VIM+ GNKSD
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L+ R V E+ + A + GL F+ETSA A NVE+AF +IY I + A
Sbjct: 123 LDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEA 182
Query: 189 SSTGL-----PQGTTINVANLSGNVKGKACC 214
+ + P ++ N G CC
Sbjct: 183 NGIKIGQQHSPTNPSLGSGNNPGGQSSSGCC 213
>gi|407867485|gb|EKG08588.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 217
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 137/214 (64%), Gaps = 16/214 (7%)
Query: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
FK+V+IGDSGVGKSN+++R+T NEF ++ +TIGVEF T+++++EG+ K QIWDTAGQE
Sbjct: 8 FKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQE 67
Query: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHL 132
R+RAI+ + Y GA GA+LVYDIT + +FD++ WL+ELR + I + GNK DL HL
Sbjct: 68 RFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCSIFLIGNKCDLEHL 127
Query: 133 RAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTG 192
R V E A A + GLSFLETSALE NVEKAF+ + +Y ++ +A +AA
Sbjct: 128 RVVKKEVADRFARENGLSFLETSALEKTNVEKAFEWLAKSVYDLV----VAPVDAAGGRR 183
Query: 193 LPQGTTINV---ANLSGNVKGKA---------CC 214
P N NL + G+A CC
Sbjct: 184 PPLNAAANAKRPVNLGASNDGQAAGKKENTGRCC 217
>gi|71417072|ref|XP_810463.1| small GTP-binding protein Rab11 [Trypanosoma cruzi strain CL
Brener]
gi|70874996|gb|EAN88612.1| small GTP-binding protein Rab11, putative [Trypanosoma cruzi]
Length = 217
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 137/214 (64%), Gaps = 16/214 (7%)
Query: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
FK+V+IGDSGVGKSN+++R+T NEF ++ +TIGVEF T+++++EG+ K QIWDTAGQE
Sbjct: 8 FKVVIIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQE 67
Query: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSDLNHL 132
R+RAI+ + Y GA GA+LVYDIT + +FD++ WL+ELR + I + GNK DL HL
Sbjct: 68 RFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCSIFLIGNKCDLEHL 127
Query: 133 RAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASSTG 192
R V E A A + GLSFLETSALE NVEKAF+ + +Y ++ +A +AA
Sbjct: 128 RVVKKEVADRFARENGLSFLETSALEKTNVEKAFEWLAKSVYDLV----VAPVDAAGGRR 183
Query: 193 LPQGTTINV---ANLSGNVKGKA---------CC 214
P N NL + G+A CC
Sbjct: 184 PPLNAAANAKRPVNLGASNDGQAAGKKENTGRCC 217
>gi|221121860|ref|XP_002155452.1| PREDICTED: ras-related protein Rab-2-like [Hydra magnipapillata]
Length = 212
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 135/210 (64%), Gaps = 4/210 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R TF+++T WL + R H+ SN+VIM+ GNKSD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V E+ + A + GL F+ETSA A NVE+AF +IY I + A
Sbjct: 123 LEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIGTAKEIYQKIQEGVFDINNEA 182
Query: 189 SSTGL-PQGTTINVANLSG---NVKGKACC 214
+ + PQ T+ + + +SG N + CC
Sbjct: 183 NGIKIGPQHTSSSPSTISGGAANQQSGGCC 212
>gi|432915657|ref|XP_004079196.1| PREDICTED: ras-related protein Rab-2A-like [Oryzias latipes]
Length = 212
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 134/210 (63%), Gaps = 4/210 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R TF+++T WL + R H++SN+VIM+ GNKSD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V E+ + A + GL F+ETSA A NVE+AF +IY I + A
Sbjct: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
Query: 189 SSTGL-PQGTTIN---VANLSGNVKGKACC 214
+ + PQ T N ++ G+ G CC
Sbjct: 183 NGIKIGPQHPTTNSTLSSSQGGHQAGGGCC 212
>gi|226479810|emb|CAX73201.1| RAB2, member RAS oncogene family [Schistosoma japonicum]
Length = 213
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 130/211 (61%), Gaps = 5/211 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R TF ++T WL + R H+ SN+VIM+ GNKSD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFTHLTTWLEDARQHSSSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V E+ + A + GL F+ETSA A NVE AF I+ I + AL A
Sbjct: 123 LESRRDVQKEEGEAFAREHGLVFMETSAKTAANVEDAFINTAKCIHDKIQEGALDVNNEA 182
Query: 189 SSTGL-----PQGTTINVANLSGNVKGKACC 214
+ L P G N N++ G CC
Sbjct: 183 NGIKLGPHHNPVGGVYNNNNMTNCTSGAGCC 213
>gi|345311553|ref|XP_001505470.2| PREDICTED: ras-related protein Rab-11B-like [Ornithorhynchus
anatinus]
Length = 165
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/109 (83%), Positives = 102/109 (93%)
Query: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR++QV+GKT+KAQIWDTAGQE
Sbjct: 9 LSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 68
Query: 73 RYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIM 121
RYRAITSAYYRGAVGALLVYDI K T++NV RWL+ELRDHAD+NIVI+
Sbjct: 69 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVII 117
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 144/212 (67%), Gaps = 9/212 (4%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++ +GKT+K Q
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL E+ +A N+ ++ G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDL + V++E A+ A++ G+ F+ETSA A NVE+AF + I K +A+
Sbjct: 121 NKSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASI-----KDRMAS 175
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
Q AAS+ P T+ + N K +CCS+
Sbjct: 176 QPAASNARPP---TVQIRGQPVNQK-TSCCSS 203
>gi|391333703|ref|XP_003741250.1| PREDICTED: ras-related protein Rab-2A-like [Metaseiulus
occidentalis]
Length = 211
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 132/209 (63%), Gaps = 3/209 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + +E K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIEKKQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R TF+++T WL + R H++SN+VIM+ GNKSD
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V E+ + A++ GL F+ETSA A NVE AF +IY I A
Sbjct: 123 LEGRREVKKEEGEAFAQEHGLVFMETSAKTADNVEDAFINTAKEIYDKIQDGVFDINNEA 182
Query: 189 SSTGL-PQ--GTTINVANLSGNVKGKACC 214
+ + PQ T+ N SGN + CC
Sbjct: 183 NGIKIGPQQANTSPGGGNPSGNTQSGGCC 211
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 141/211 (66%), Gaps = 8/211 (3%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++ +GKT+K Q
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL E+ +A N+ ++ G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NK DL R V+ E + LA+ G+ FLETSA +A NVEKAF T+ +I K +A+
Sbjct: 121 NKCDLAENRVVSYEAGKALADDIGIPFLETSAKDATNVEKAFMTMAGEI-----KNRMAS 175
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCS 215
Q AAS P + +S + +CCS
Sbjct: 176 QPAASGASRPATVQMRGQPVS---QQSSCCS 203
>gi|74152890|dbj|BAE27741.1| unnamed protein product [Mus musculus]
Length = 208
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 135/208 (64%), Gaps = 4/208 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++GK +K QIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQER+R IT+AYYRGA+G +LVYDIT ++FDN+ W+R + +HA +++ M+ GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
+N R V+ E + LA G+ F+ETSA +NVE AF T+ DI + KK E
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL----EGN 180
Query: 189 SSTGLPQGTTINVANLSGNVKGKACCSN 216
S G G I V G + C S+
Sbjct: 181 SPQGSSHGVKITVDRFHGQSRMGVCDSD 208
>gi|302142882|emb|CBI20177.3| unnamed protein product [Vitis vinifera]
Length = 171
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 131/214 (61%), Gaps = 48/214 (22%)
Query: 3 YKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Y+ + +YDYLFK+ SKSTIGVEFATRTL V+GK +K
Sbjct: 4 YRAEDDYDYLFKV-------------------------SKSTIGVEFATRTLNVDGKVIK 38
Query: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMM 122
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H D NIV
Sbjct: 39 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV--- 95
Query: 123 AGNKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL 182
AE+E L F+ETSALEA NVE AF +L IY I+SKK++
Sbjct: 96 -------------------TYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSV 136
Query: 183 AAQEAASSTGLP-QGTTINVANLSGNVKGKACCS 215
+ +++ +P +G INV + + +K CCS
Sbjct: 137 EGGDEGAASSVPAKGERINVKDDASALKRVGCCS 170
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 141/210 (67%), Gaps = 2/210 (0%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT+ ++GKT+K Q
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQ 63
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQER+R ITS+YYRGA G ++VYD T +++F+NV +WL E+ +A N+ ++ G
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIDRYACDNVNKLLVG 123
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDL+ + V A+ A++ G+ FLETSA A+NVE+AF T+ +I + + A
Sbjct: 124 NKSDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKSRVGPPSSGA 183
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACC 214
+ S + QG I+ + + G+ G CC
Sbjct: 184 SDQTSKLKIDQGHNIDTSGIQGSKSG--CC 211
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 135/212 (63%), Gaps = 10/212 (4%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++T WL + R H++SN+VIM+ GNKSD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L R V E+ + A + GL F+ETSA A NVE+AF +IY I A A
Sbjct: 123 LESRRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGAFDINNEA 182
Query: 189 SSTGL-PQGTTINVANLSGNVKGKA-----CC 214
+ L PQ N +N S +V + CC
Sbjct: 183 NGIKLGPQ----NPSNPSTSVPDRPPQSGGCC 210
>gi|89258411|gb|ABD65429.1| Rab2 [Suberites domuncula]
Length = 214
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 133/212 (62%), Gaps = 6/212 (2%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + +EGK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R+TFD++T WL + R H+ SN+VIM+ GNKSD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFDHLTTWLEDARQHSSSNMVIMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
L+ R V +E+ A++ GL F+ETSA A NVE+AF +IY I A
Sbjct: 123 LDAKREVKSEEGLAFAKEHGLVFMETSAKTAANVEEAFINTAKEIYTKIQDGVFDVNNEA 182
Query: 189 SSTGL-PQ----GTTINVANLSGNVKGK-ACC 214
+ L PQ GT G +G CC
Sbjct: 183 NGIKLGPQHQTGGTVRPGTTEPGKPQGSGGCC 214
>gi|427782855|gb|JAA56879.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 207
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YD+LFK++LIGDSGVGK++IL RF+ N+F STIG++F R ++++GK +K QIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIWDT 64
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQER+R IT+AYYRGA+G +LVYD+TK TF+N+ W+R +HA +++ M+ GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIKTWIRNTDEHAAADVEKMILGNKCD 124
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
+N LR V+ E + LA + + F+ETSA+ ++NVE+AF T+ DI + +K +AA+
Sbjct: 125 MNELRQVSKERGEKLAIEHNIKFMETSAVSSINVEEAFYTLARDIKEKMERK-VAARAQP 183
Query: 189 SSTG 192
TG
Sbjct: 184 KPTG 187
>gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 131/186 (70%), Gaps = 2/186 (1%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++GK VK QIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWDT 64
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQER+R IT+AYYRGA+G +LVYDI+ ++F+N+ W+R + +HA S++ M+ GNK D
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDISNEKSFENIKNWIRNIEEHASSDVEKMILGNKCD 124
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAA 188
+ R V+ + + LA G+ FLETSA +LNVE+AF T+ DI H +S K A A
Sbjct: 125 MTDRRQVSKDRGEKLAIDYGVKFLETSAKSSLNVEEAFYTMARDILHNLSSK--TADPTA 182
Query: 189 SSTGLP 194
+G P
Sbjct: 183 GGSGKP 188
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 142/211 (67%), Gaps = 9/211 (4%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++ +GKT+K Q
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL E+ +A N+ ++ G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDL + V+ E A+ A++ G+ F+ETSA A NVE+AF + DI K +A+
Sbjct: 121 NKSDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADI-----KNRMAS 175
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCS 215
Q AA++ P T+ + N K CCS
Sbjct: 176 QPAANNARPP---TVQIRGQPVNQKS-GCCS 202
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 143/212 (67%), Gaps = 9/212 (4%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++ +GKT+K Q
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQER+R ITS+YYRGA G ++VYDIT +++F+NV +WL E+ +A N+ ++ G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDLN RAV+ + A+ A++ G+ F+E SA A NVE+AF + +I K +A
Sbjct: 121 NKSDLNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEI-----KNRMAT 175
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCSN 216
Q A+++ P T+ + N K CCS+
Sbjct: 176 QPASNNAKPP---TVQIRGQPVNQKS-GCCSS 203
>gi|72392927|ref|XP_847264.1| small GTP-binding protein Rab11 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|7939615|gb|AAF70820.1|AF152531_1 small GTPase Rab11 [Trypanosoma brucei]
gi|11611729|gb|AAG39034.1|AF234188_1 RAB11A GTPase [Trypanosoma brucei]
gi|62176098|gb|AAX70217.1| small GTP-binding protein Rab11 [Trypanosoma brucei]
gi|70803294|gb|AAZ13198.1| small GTP-binding protein Rab11 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 216
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 142/215 (66%), Gaps = 7/215 (3%)
Query: 7 HEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIW 66
+ + FK+V++GDSGVGKSN+++R+T +EF ++ +TIGVEF T+++++EG+ K QIW
Sbjct: 2 EDMNLTFKVVIVGDSGVGKSNLMTRYTADEFSQDTPATIGVEFMTKSIKIEGRDAKVQIW 61
Query: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNK 126
DTAGQER+RAI+ + Y GA GA+LVYDIT + +FD+++ WL+ELR + I + GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSISTWLQELRAFVPATCSIFLIGNK 121
Query: 127 SDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIY-HIISK--KALA 183
DL HLR + E A A + GLSFLETSALE NV+KAF+ + +Y H+++ A
Sbjct: 122 CDLEHLRVIKKEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYDHVVAPVDSAAT 181
Query: 184 AQEAASSTGLPQGTTINVANLSGN-VKGKA---CC 214
+ + G +N++ + N GKA CC
Sbjct: 182 GKRPPLNAGAAAKKPVNLSPSNSNQPAGKASGGCC 216
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 142/211 (67%), Gaps = 9/211 (4%)
Query: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++ +GKT+K Q
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAG 124
IWDTAGQER+R ITS+YYRGA G ++VYDIT +++F+NV +WL E+ +A N+ ++ G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVG 120
Query: 125 NKSDLNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
NKSDLN RAV+ + A+ A++ G+ F+E SA A NVE+AF + +I K +A
Sbjct: 121 NKSDLNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEI-----KNRMAT 175
Query: 185 QEAASSTGLPQGTTINVANLSGNVKGKACCS 215
Q A+++ P T+ + N K CCS
Sbjct: 176 QPASNNAKPP---TVQIRGQPVNQK-NGCCS 202
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis domestica]
Length = 207
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 128/172 (74%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++GK +K QIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQER+R IT+AYYRGA+G +LVYDIT ++FDN+ W+R + +HA S++ M+ GNKSD
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKSD 124
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKK 180
+N R V+ E + LA G+ FLETSA ++NVE+AF T+ DI +++K
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNRK 176
>gi|323445864|gb|EGB02268.1| hypothetical protein AURANDRAFT_35409 [Aureococcus anophagefferens]
Length = 210
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 144/214 (67%), Gaps = 14/214 (6%)
Query: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Y YLFK ++IGD+GVGKS +L +FT F + TIGVEF R + ++ + +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARMVAIDERQIKLQIWDT 62
Query: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVTRWLRELRDHADSNIVIMMAGNKSD 128
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++TRWL E R +++SN+V+M+ GNKSD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMVVMLIGNKSD 122
Query: 129 LNHLRAVAAEDAQILAEKEGLSFLETSALEALNVEKAF--------QTILLDIYHIISKK 180
L H RAV+ ++ + A K GL F+ETSA + NVE+AF + I ++ ++ +
Sbjct: 123 LGHRRAVSTDEGEEFARKNGLVFMETSAKTSSNVERAFIDTASTIHENITAGVFD-VTNE 181
Query: 181 ALAAQEAASSTGLPQGTTINVANLSGNVKGKACC 214
+L + +S+ LP N ++ +G+ K CC
Sbjct: 182 SLGIKVGVASSELP-----NSSSTAGSYAHKNCC 210
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.131 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,920,872,469
Number of Sequences: 23463169
Number of extensions: 103301407
Number of successful extensions: 540095
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17552
Number of HSP's successfully gapped in prelim test: 7397
Number of HSP's that attempted gapping in prelim test: 503703
Number of HSP's gapped (non-prelim): 25686
length of query: 217
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 80
effective length of database: 9,144,741,214
effective search space: 731579297120
effective search space used: 731579297120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)