BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042690
(266 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 35 GSFSTVYTGVLAPGDKTNIGVKKLDK------------VVHVAHHKNLVCLLGYHIEQEC 82
G F VY GVL G K + + + + H +LV L+G+ E+
Sbjct: 50 GVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109
Query: 83 RLLVYKFMHNRSISSLLYECLRPT----WQQRMQDCIRDC-----WRTRALACR------ 127
+L+YK+M N ++ LY PT W+QR++ CI TRA+ R
Sbjct: 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSIN 169
Query: 128 ILLHDYFTVETSDLGLAKL-LMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL + F + +D G++K ++QT ++ T GY+ PE+F +T K DVYSFGV
Sbjct: 170 ILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGV 229
Query: 187 MLLEIISCRCV 197
+L E++ R
Sbjct: 230 VLFEVLCARSA 240
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 28/191 (14%)
Query: 35 GSFSTVYTGVLAPGDKTNIGVKKLDK------------VVHVAHHKNLVCLLGYHIEQEC 82
G F VY GVL G K + + + + H +LV L+G+ E+
Sbjct: 50 GVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109
Query: 83 RLLVYKFMHNRSISSLLYECLRPT----WQQRMQDCIRDC-----WRTRALACR------ 127
+L+YK+M N ++ LY PT W+QR++ CI TRA+ R
Sbjct: 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSIN 169
Query: 128 ILLHDYFTVETSDLGLAKL-LMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL + F + +D G++K + QT ++ T GY+ PE+F +T K DVYSFGV
Sbjct: 170 ILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGV 229
Query: 187 MLLEIISCRCV 197
+L E++ R
Sbjct: 230 VLFEVLCARSA 240
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 92/208 (44%), Gaps = 40/208 (19%)
Query: 24 SHIYSLKKPCG-GSFSTVYTGVLAPGDKTNIGVKKLDK---------------VVHVAHH 67
S +S K G G F VY G LA G T + VK+L + ++ +A H
Sbjct: 37 SDNFSNKNILGRGGFGKVYKGRLADG--TLVAVKRLKEERXQGGELQFQTEVEMISMAVH 94
Query: 68 KNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRP------TWQQRMQ--------- 112
+NL+ L G+ + RLLVY +M N S++S L E RP W +R +
Sbjct: 95 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPESQPPLDWPKRQRIALGSARGL 152
Query: 113 -----DCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPP 167
C A ILL + F D GLAKL+ +R T G++ P
Sbjct: 153 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAP 212
Query: 168 EWFRNMPVTVKVDVYSFGVMLLEIISCR 195
E+ + K DV+ +GVMLLE+I+ +
Sbjct: 213 EYLSTGKSSEKTDVFGYGVMLLELITGQ 240
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 85/196 (43%), Gaps = 39/196 (19%)
Query: 35 GSFSTVYTGVLAPGDKTNIGVKKLDK---------------VVHVAHHKNLVCLLGYHIE 79
G F VY G LA G + VK+L + ++ +A H+NL+ L G+ +
Sbjct: 41 GGFGKVYKGRLADG--XLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98
Query: 80 QECRLLVYKFMHNRSISSLLYECLRP------TWQQRMQ--------------DCIRDCW 119
RLLVY +M N S++S L E RP W +R + C
Sbjct: 99 PTERLLVYPYMANGSVASCLRE--RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII 156
Query: 120 RTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKV 179
A ILL + F D GLAKL+ +R G++ PE+ + K
Sbjct: 157 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKT 216
Query: 180 DVYSFGVMLLEIISCR 195
DV+ +GVMLLE+I+ +
Sbjct: 217 DVFGYGVMLLELITGQ 232
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 90/207 (43%), Gaps = 39/207 (18%)
Query: 35 GSFSTVYTGVLAPGDKTNIGVKKLDKVVHVA------------------HHKNLVCLLGY 76
G F VY G + + T + VKKL +V + H+NLV LLG+
Sbjct: 42 GGFGVVYKGYV---NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 77 HIEQECRLLVYKFMHNRSISSLLYECLRPT----WQQR------MQDCIRDCWRTRAL-- 124
+ + LVY +M N S+ L CL T W R + I +
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 125 ---ACRILLHDYFTVETSDLGLAKLL-MINQTQTLTGMRETKGYLPPEWFRNMPVTVKVD 180
+ ILL + FT + SD GLA+ QT + + T Y+ PE R +T K D
Sbjct: 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EITPKSD 216
Query: 181 VYSFGVMLLEIISCRCVERQGSDPKTL 207
+YSFGV+LLEII+ + +P+ L
Sbjct: 217 IYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 89/207 (42%), Gaps = 39/207 (18%)
Query: 35 GSFSTVYTGVLAPGDKTNIGVKKLDKVVHVA------------------HHKNLVCLLGY 76
G F VY G + + T + VKKL +V + H+NLV LLG+
Sbjct: 42 GGFGVVYKGYV---NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 77 HIEQECRLLVYKFMHNRSISSLLYECLRPT----WQQR------MQDCIRDCWRTRAL-- 124
+ + LVY +M N S+ L CL T W R + I +
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 125 ---ACRILLHDYFTVETSDLGLAKLL-MINQTQTLTGMRETKGYLPPEWFRNMPVTVKVD 180
+ ILL + FT + SD GLA+ QT + T Y+ PE R +T K D
Sbjct: 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG-EITPKSD 216
Query: 181 VYSFGVMLLEIISCRCVERQGSDPKTL 207
+YSFGV+LLEII+ + +P+ L
Sbjct: 217 IYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 88/207 (42%), Gaps = 39/207 (18%)
Query: 35 GSFSTVYTGVLAPGDKTNIGVKKLDKVVHVA------------------HHKNLVCLLGY 76
G F VY G + + T + VKKL +V + H+NLV LLG+
Sbjct: 36 GGFGVVYKGYV---NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 92
Query: 77 HIEQECRLLVYKFMHNRSISSLLYECLRPT----WQQR------MQDCIRDCWRTRAL-- 124
+ + LVY +M N S+ L CL T W R + I +
Sbjct: 93 SSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 151
Query: 125 ---ACRILLHDYFTVETSDLGLAKLL-MINQTQTLTGMRETKGYLPPEWFRNMPVTVKVD 180
+ ILL + FT + SD GLA+ Q + T Y+ PE R +T K D
Sbjct: 152 DIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EITPKSD 210
Query: 181 VYSFGVMLLEIISCRCVERQGSDPKTL 207
+YSFGV+LLEII+ + +P+ L
Sbjct: 211 IYSFGVVLLEIITGLPAVDEHREPQLL 237
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 106/271 (39%), Gaps = 69/271 (25%)
Query: 30 KKPCGGSFSTVYTGVLAPGDKTNIGVKKLDKVVHVA------------------HHKNLV 71
K G F VY G + + T + VKKL +V + H+NLV
Sbjct: 28 NKXGEGGFGVVYKGYV---NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLV 84
Query: 72 CLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPT----WQQR------MQDCIRDCWRT 121
LLG+ + + LVY + N S+ L CL T W R + I
Sbjct: 85 ELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHXRCKIAQGAANGINFLHEN 143
Query: 122 RAL-----ACRILLHDYFTVETSDLGLAKLL-MINQTQTLTGMRETKGYLPPEWFRNMPV 175
+ + ILL + FT + SD GLA+ Q + + T Y PE R +
Sbjct: 144 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG-EI 202
Query: 176 TVKVDVYSFGVMLLEIIS----------------------------CRCVERQ--GSDPK 205
T K D+YSFGV+LLEII+ ++++ +D
Sbjct: 203 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADST 262
Query: 206 TLEKPVMIAIQFVKEKPPLRPSLRIVALMLQ 236
++E +A Q + EK RP ++ V +LQ
Sbjct: 263 SVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 126 CRILLHDYFTVETSDLGLAKLLM-----INQTQTLTGMRETKGYLPPEWFRNMPVTVKVD 180
IL+ V+ D G+A+ + + QT + G T YL PE R V + D
Sbjct: 145 ANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG---TAQYLSPEQARGDSVDARSD 201
Query: 181 VYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLR 229
VYS G +L E+++ G P T + PV +A Q V+E P+ PS R
Sbjct: 202 VYSLGCVLYEVLT-------GEPPFTGDSPVSVAYQHVRED-PIPPSAR 242
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 126 CRILLHDYFTVETSDLGLAKLLM-----INQTQTLTGMRETKGYLPPEWFRNMPVTVKVD 180
I++ V+ D G+A+ + + QT + G T YL PE R V + D
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG---TAQYLSPEQARGDSVDARSD 201
Query: 181 VYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLR 229
VYS G +L E+++ G P T + PV +A Q V+E P+ PS R
Sbjct: 202 VYSLGCVLYEVLT-------GEPPFTGDSPVSVAYQHVRED-PIPPSAR 242
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 126 CRILLHDYFTVETSDLGLAKLLM-----INQTQTLTGMRETKGYLPPEWFRNMPVTVKVD 180
I++ V+ D G+A+ + + QT + G T YL PE R V + D
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG---TAQYLSPEQARGDSVDARSD 201
Query: 181 VYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLR 229
VYS G +L E+++ G P T + PV +A Q V+E P+ PS R
Sbjct: 202 VYSLGCVLYEVLT-------GEPPFTGDSPVSVAYQHVRED-PIPPSAR 242
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 126 CRILLHDYFTVETSDLGLAKLLM-----INQTQTLTGMRETKGYLPPEWFRNMPVTVKVD 180
I++ V+ D G+A+ + + QT + G T YL PE R V + D
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG---TAQYLSPEQARGDSVDARSD 201
Query: 181 VYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLR 229
VYS G +L E+++ G P T + PV +A Q V+E P+ PS R
Sbjct: 202 VYSLGCVLYEVLT-------GEPPFTGDSPVSVAYQHVRED-PIPPSAR 242
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 126 CRILLHDYFTVETSDLGLAKLLM-----INQTQTLTGMRETKGYLPPEWFRNMPVTVKVD 180
I++ V+ D G+A+ + + QT + G T YL PE R V + D
Sbjct: 162 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG---TAQYLSPEQARGDSVDARSD 218
Query: 181 VYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLR 229
VYS G +L E+++ G P T + PV +A Q V+E P+ PS R
Sbjct: 219 VYSLGCVLYEVLT-------GEPPFTGDSPVSVAYQHVRED-PIPPSAR 259
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 103/262 (39%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG F VY GV T + VK L + V+ H NLV LLG
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPT------------WQQRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G DP + + ++ + E+P P ++ LM PS
Sbjct: 197 GVLLWEIATYGMSPYPGIDPSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 253
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 254 RPSFAEIHQAFETMFQESSISD 275
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 81
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 141
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ ++ + ++ +T
Sbjct: 142 QVA--KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSV--HNKTG 197
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 198 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 77/184 (41%), Gaps = 27/184 (14%)
Query: 35 GSFSTVYTGVLAPGDKTNI-----GVKKLDKVVHVAH------HKNLVCLLGYHIEQECR 83
G F V+ G DK I G D + A H LV L G +EQ
Sbjct: 38 GQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI 97
Query: 84 LLVYKFMHNRSIS-------------SLLYECLRPTWQQRMQDCIRDCWRTRALACR-IL 129
LV++FM + +S +LL CL + M C R LA R L
Sbjct: 98 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEEACVIHRDLAARNCL 155
Query: 130 LHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLL 189
+ + ++ SD G+ + ++ +Q + TG + + PE F + K DV+SFGV++
Sbjct: 156 VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 215
Query: 190 EIIS 193
E+ S
Sbjct: 216 EVFS 219
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 42/213 (19%)
Query: 19 VFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH--------- 66
V G S I + G G F VY G L D I VK L+++ +
Sbjct: 23 VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI 82
Query: 67 ------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECLRPT 106
H N++ LLG Y + R + HN ++ L+ L+
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 142
Query: 107 WQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYL 165
+ M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T L
Sbjct: 143 --KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSV--HNKTGAKL 198
Query: 166 PPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
P +W + T K DV+SFGV+L E+++
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 80 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 139
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 140 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 199
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 200 QVA--KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV--HNKTG 255
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 256 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 103/262 (39%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLR------------PTWQQRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G DP + + ++ + E+P P ++ LM PS
Sbjct: 197 GVLLWEIATYGMSPYPGIDPSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 253
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 254 RPSFAEIHQAFETMFQESSISD 275
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 42/226 (18%)
Query: 29 LKKPCGGSFSTVY-------------TGVLAPGDKTNIGVKKLDKVVHVAH---HKNLVC 72
+ K GG STVY + P + +K+ ++ VH + H+N+V
Sbjct: 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 73 LLGYHIEQECRLLVYKFMHNRSISSLLYECLRP-------TWQQRMQDCIRDCWRTRALA 125
++ E +C LV +++ ++S + E P + ++ D I+ R +
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAHDMRIVH 134
Query: 126 -----CRILLHDYFTVETSDLGLAKLLM---INQTQTLTGMRETKGYLPPEWFRNMPVTV 177
IL+ T++ D G+AK L + QT + G T Y PE +
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG---TVQYFSPEQAKGEATDE 191
Query: 178 KVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPP 223
D+YS G++L E++ G P E V IAI+ +++ P
Sbjct: 192 CTDIYSIGIVLYEMLV-------GEPPFNGETAVSIAIKHIQDSVP 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 140
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 141 QVA--KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV--HNKTG 196
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 197 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 140
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 141 QVA--KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV--HNKTG 196
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 197 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 81
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 141
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 142 QVA--KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV--HNKTG 197
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 198 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 26 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 85
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 86 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 145
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 146 QVA--KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV--HNKTG 201
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 202 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 13 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 72
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 73 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 132
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 133 QVA--KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTG 188
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 189 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 38/214 (17%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 19 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 78
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 138
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM---INQTQTLTGMR 159
+ + M+ + R LA R +L + FTV+ +D GLA+ + + TG +
Sbjct: 139 QVA--KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 196
Query: 160 ETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
++ E + T K DV+SFGV+L E+++
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 39 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 98
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 99 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 158
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 159 QVA--KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTG 214
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 215 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 140
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 141 QVA--KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTG 196
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 197 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 40 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 99
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 100 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 159
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 160 QVA--KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTG 215
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 216 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 27/195 (13%)
Query: 24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNI-----GVKKLDKVVHVAH------HKNLVC 72
S + +++ G F V+ G DK I G + + A H LV
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 73 LLGYHIEQECRLLVYKFMHNRSIS-------------SLLYECLRPTWQQRMQDCIRDCW 119
L G +EQ LV++FM + +S +LL CL + M C
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEEACV 124
Query: 120 RTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVK 178
R LA R L+ + ++ SD G+ + ++ +Q + TG + + PE F + K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 179 VDVYSFGVMLLEIIS 193
DV+SFGV++ E+ S
Sbjct: 185 SDVWSFGVLMWEVFS 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 106/256 (41%), Gaps = 32/256 (12%)
Query: 24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNI-----GVKKLDKVVHVAH------HKNLVC 72
S + +++ G F V+ G DK I G + + A H LV
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 73 LLGYHIEQECRLLVYKFMHNRSIS-------------SLLYECLRPTWQQRMQDCIRDCW 119
L G +EQ LV++FM + +S +LL CL + M C
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEEACV 127
Query: 120 RTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVK 178
R LA R L+ + ++ SD G+ + ++ +Q + TG + + PE F + K
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 179 VDVYSFGVMLLEIISCRCVERQG-SDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQS 237
DV+SFGV++ E+ S + + S+ + +E I+ F KP L S + +M
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVED---ISTGFRLYKPRL-ASTHVYQIMNHC 243
Query: 238 ILEVPSPPCSFAFAIR 253
E P +F+ +R
Sbjct: 244 WRERPEDRPAFSRLLR 259
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 27/195 (13%)
Query: 24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNI-----GVKKLDKVVHVAH------HKNLVC 72
S + +++ G F V+ G DK I G + + A H LV
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 73 LLGYHIEQECRLLVYKFMHNRSIS-------------SLLYECLRPTWQQRMQDCIRDCW 119
L G +EQ LV++FM + +S +LL CL + M C
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEEACV 122
Query: 120 RTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVK 178
R LA R L+ + ++ SD G+ + ++ +Q + TG + + PE F + K
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 179 VDVYSFGVMLLEIIS 193
DV+SFGV++ E+ S
Sbjct: 183 SDVWSFGVLMWEVFS 197
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 18 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 77
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 78 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 137
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 138 QVA--KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTG 193
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 194 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 19 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 78
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 138
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 139 QVA--KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTG 194
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 195 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 16 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 75
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 76 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 135
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 136 QVA--KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTG 191
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 192 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 140
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 141 QVA--KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTG 196
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 197 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 16 ENRVFGSFSHIYSLKKPCG-GSFSTVYTGVLAPGDKTNI--GVKKLDKVVHVAH------ 66
++ V G S I + G G F VY G L D I VK L+++ +
Sbjct: 20 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 79
Query: 67 ---------HKNLVCLLG--------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N++ LLG Y + R + HN ++ L+ L
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 139
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
+ + M+ + R LA R +L + FTV+ +D GLA+ + + ++ +T
Sbjct: 140 QVA--KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTG 195
Query: 163 GYLPPEW-----FRNMPVTVKVDVYSFGVMLLEIIS 193
LP +W + T K DV+SFGV+L E+++
Sbjct: 196 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 126 CRILLHDYFTVETSDLGLAKLLM-----INQTQTLTGMRETKGYLPPEWFRNMPVTVKVD 180
I++ V+ D G+A+ + + QT + G T YL PE R V + D
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG---TAQYLSPEQARGDSVDARSD 201
Query: 181 VYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLR 229
VYS G +L E+++ G P T + P +A Q V+E P+ PS R
Sbjct: 202 VYSLGCVLYEVLT-------GEPPFTGDSPDSVAYQHVRED-PIPPSAR 242
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 103/262 (39%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPT------------WQQRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G DP + + ++ + E+P P ++ LM PS
Sbjct: 197 GVLLWEIATYGMSPYPGIDPSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 253
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 254 RPSFAEIHQAFETMFQESSISD 275
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 105/256 (41%), Gaps = 32/256 (12%)
Query: 24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNI-----GVKKLDKVVHVAH------HKNLVC 72
S + +++ G F V+ G DK I G + + A H LV
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 73 LLGYHIEQECRLLVYKFMHNRSIS-------------SLLYECLRPTWQQRMQDCIRDCW 119
L G +EQ LV +FM + +S +LL CL + M C
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEEACV 125
Query: 120 RTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVK 178
R LA R L+ + ++ SD G+ + ++ +Q + TG + + PE F + K
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 179 VDVYSFGVMLLEIISCRCVERQG-SDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQS 237
DV+SFGV++ E+ S + + S+ + +E I+ F KP L S + +M
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVED---ISTGFRLYKPRL-ASTHVYQIMNHC 241
Query: 238 ILEVPSPPCSFAFAIR 253
E P +F+ +R
Sbjct: 242 WRERPEDRPAFSRLLR 257
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 60 KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECL-RPTWQQRMQDCIRDC 118
KV+ H+ LV L G +Q ++ ++M N + + L E R QQ ++ C C
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVC 130
Query: 119 WRTRALACRILLH-----------DYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPP 167
L + LH D V+ SD GL++ ++ ++ + G + + PP
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPP 190
Query: 168 EWFRNMPVTVKVDVYSFGVMLLEIIS 193
E + K D+++FGV++ EI S
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 145 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 204
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 205 GILLTEIVT 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 138 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 197
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 198 GILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 197 GILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 139 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 198
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 199 GILLTEIVT 207
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 202
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 203 GILLTEIVT 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 197 GILLTEIVT 205
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL D V SDLGLA L QT+T G T G++ PE VD ++ GV
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 188 LLEIISCR 195
L E+I+ R
Sbjct: 379 LYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL D V SDLGLA L QT+T G T G++ PE VD ++ GV
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 188 LLEIISCR 195
L E+I+ R
Sbjct: 379 LYEMIAAR 386
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 146 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 205
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 206 GILLTEIVT 214
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL D V SDLGLA L QT+T G T G++ PE VD ++ GV
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 188 LLEIISCR 195
L E+I+ R
Sbjct: 379 LYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL D V SDLGLA L QT+T G T G++ PE VD ++ GV
Sbjct: 320 VLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378
Query: 188 LLEIISCR 195
L E+I+ R
Sbjct: 379 LYEMIAAR 386
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 60 KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECL-RPTWQQRMQDCIRDC 118
KV+ H+ LV L G +Q ++ ++M N + + L E R QQ ++ C C
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVC 130
Query: 119 WRTRALACRILLH-----------DYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPP 167
L + LH D V+ SD GL++ ++ ++ + G + + PP
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP 190
Query: 168 EWFRNMPVTVKVDVYSFGVMLLEIIS 193
E + K D+++FGV++ EI S
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 197 GILLTEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 147 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 206
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 207 GILLTEIVT 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 202
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 203 GILLTEIVT 211
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 133 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 192
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 193 GILLTEIVT 201
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 132 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 191
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 192 GILLTEIVT 200
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 142 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 201
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 202 GILLTEIVT 210
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 60 KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECL-RPTWQQRMQDCIRDC 118
KV+ H+ LV L G +Q ++ ++M N + + L E R QQ ++ C C
Sbjct: 62 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVC 121
Query: 119 WRTRALACRILLH-----------DYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPP 167
L + LH D V+ SD GL++ ++ ++ + G + + PP
Sbjct: 122 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP 181
Query: 168 EWFRNMPVTVKVDVYSFGVMLLEIIS 193
E + K D+++FGV++ EI S
Sbjct: 182 EVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 104/265 (39%), Gaps = 30/265 (11%)
Query: 11 DPSQYENRVFGSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK---------- 60
DPS ++ + I K GG + VY GV T + VK L +
Sbjct: 4 DPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLK 62
Query: 61 ---VVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQ--------- 108
V+ H NLV LLG + ++ +FM ++ L EC R
Sbjct: 63 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 109 ---QRMQDCIRDCWRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGY 164
M+ + + R LA R L+ + V+ +D GL++L+ + G + +
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 165 LPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPL 224
PE ++K DV++FGV+L EI + G D + + ++ + E+P
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEG 240
Query: 225 RPSLRIVALMLQSILEVPSPPCSFA 249
P ++ LM PS SFA
Sbjct: 241 CPE-KVYELMRACWQWNPSDRPSFA 264
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 60 KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECL-RPTWQQRMQDCIRDC 118
KV+ H+ LV L G +Q ++ ++M N + + L E R QQ ++ C C
Sbjct: 51 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVC 110
Query: 119 WRTRALACRILLH-----------DYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPP 167
L + LH D V+ SD GL++ ++ ++ + G + + PP
Sbjct: 111 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP 170
Query: 168 EWFRNMPVTVKVDVYSFGVMLLEIIS 193
E + K D+++FGV++ EI S
Sbjct: 171 EVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 60 KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECL-RPTWQQRMQDCIRDC 118
KV+ H+ LV L G +Q ++ ++M N + + L E R QQ ++ C C
Sbjct: 55 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVC 114
Query: 119 WRTRALACRILLH-----------DYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPP 167
L + LH D V+ SD GL++ ++ ++ + G + + PP
Sbjct: 115 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP 174
Query: 168 EWFRNMPVTVKVDVYSFGVMLLEIIS 193
E + K D+++FGV++ EI S
Sbjct: 175 EVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 60 KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECL-RPTWQQRMQDCIRDC 118
KV+ H+ LV L G +Q ++ ++M N + + L E R QQ ++ C C
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVC 115
Query: 119 WRTRALACRILLH-----------DYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPP 167
L + LH D V+ SD GL++ ++ ++ + G + + PP
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP 175
Query: 168 EWFRNMPVTVKVDVYSFGVMLLEIIS 193
E + K D+++FGV++ EI S
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
ILL D+ + SDLGLA + + + QT+ G T GY+ PE +N T D ++ G +
Sbjct: 317 ILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCL 374
Query: 188 LLEIIS 193
L E+I+
Sbjct: 375 LYEMIA 380
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 139
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 140 ARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 200 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 256
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 257 RPSFAEIHQAFETMFQESSISD 278
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 81/195 (41%), Gaps = 27/195 (13%)
Query: 24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNI-----GVKKLDKVVHVAH------HKNLVC 72
S + +++ G F V+ G DK I G + + A H LV
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 73 LLGYHIEQECRLLVYKFMHNRSIS-------------SLLYECLRPTWQQRMQDCIRDCW 119
L G +EQ LV++FM + +S +LL CL + M
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVC--EGMAYLEEASV 124
Query: 120 RTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVK 178
R LA R L+ + ++ SD G+ + ++ +Q + TG + + PE F + K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 179 VDVYSFGVMLLEIIS 193
DV+SFGV++ E+ S
Sbjct: 185 SDVWSFGVLMWEVFS 199
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
ILL D+ + SDLGLA + + + QT+ G T GY+ PE +N T D ++ G +
Sbjct: 317 ILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCL 374
Query: 188 LLEIIS 193
L E+I+
Sbjct: 375 LYEMIA 380
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 60 KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECL-RPTWQQRMQDCIRDC 118
KV+ H+ LV L G +Q ++ ++M N + + L E R QQ ++ C C
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVC 115
Query: 119 WRTRALACRILLH-----------DYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPP 167
L + LH D V+ SD GL++ ++ ++ + G + + PP
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPP 175
Query: 168 EWFRNMPVTVKVDVYSFGVMLLEIIS 193
E + K D+++FGV++ EI S
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 30/245 (12%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 204 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 260
Query: 245 PCSFA 249
SFA
Sbjct: 261 RPSFA 265
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 92 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 151
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 152 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 211
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 212 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 268
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 269 RPSFAEIHQAFETMFQESSISD 290
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 30/245 (12%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 283 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLA 342
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 343 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 402
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 403 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 459
Query: 245 PCSFA 249
SFA
Sbjct: 460 RPSFA 464
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 204 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 260
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 261 RPSFAEIHQAFETMFQESSISD 282
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 30/245 (12%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 325 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLA 384
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 385 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 444
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 445 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 501
Query: 245 PCSFA 249
SFA
Sbjct: 502 RPSFA 506
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 30/245 (12%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 199 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 255
Query: 245 PCSFA 249
SFA
Sbjct: 256 RPSFA 260
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 140
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 141 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 201 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 257
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 258 RPSFAEIHQAFETMFQESSISD 279
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 140
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 141 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 201 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 257
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 258 RPSFAEIHQAFETMFQESSISD 279
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPT------------WQQRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 199 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 255
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 256 RPSFAEIHQAFETMFQESSISD 277
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPT------------WQQRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 199 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 255
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 256 RPSFAEIHQAFETMFQESSISD 277
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 30/245 (12%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLR------------PTWQQRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 286 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLA 345
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 346 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 405
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 406 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 462
Query: 245 PCSFA 249
SFA
Sbjct: 463 RPSFA 467
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPT------------WQQRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 199 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 255
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 256 RPSFAEIHQAFETMFQESSISD 277
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPT------------WQQRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 204 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 260
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 261 RPSFAEIHQAFETMFQESSISD 282
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 30/245 (12%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 204 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 260
Query: 245 PCSFA 249
SFA
Sbjct: 261 RPSFA 265
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 30/245 (12%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 204 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 260
Query: 245 PCSFA 249
SFA
Sbjct: 261 RPSFA 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 140
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 141 ARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 201 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 257
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 258 RPSFAEIHQAFETMFQESSISD 279
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 30/245 (12%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 199 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 255
Query: 245 PCSFA 249
SFA
Sbjct: 256 RPSFA 260
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPTWQ------------QRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 80 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 139
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 140 ARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 200 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 256
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 257 RPSFAEIHQAFETMFQESSISD 278
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 102/262 (38%), Gaps = 35/262 (13%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLR------------PTWQQRMQDCIRDCWRTRALA 125
+ ++ +FM ++ L EC R M+ + + R LA
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 198
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
GV+L EI + G D + + ++ + E+P P ++ LM PS
Sbjct: 199 GVLLWEIATYGMSPYPGIDLSQVYE--LLEKDYRMERPEGCPE-KVYELMRACWQWNPSD 255
Query: 245 PCSF-----AFAIRIGSSAISQ 261
SF AF S+IS
Sbjct: 256 RPSFAEIHQAFETMFQESSISD 277
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V+ P + + V+ H N++ +GY +
Sbjct: 47 GSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL 106
Query: 83 RLL--------VYKFMHNRSISSLLYECL---RPTWQQRMQDCIRDCWRTRALACRILLH 131
++ +YK +H + +++ + R T Q ++ + I LH
Sbjct: 107 AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH 166
Query: 132 DYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSF 184
+ TV+ D GLA + Q + TG + ++ PE R N P + + DVYS+
Sbjct: 167 EGLTVKIGDFGLATVKSRWSGSQQVEQPTG---SVLWMAPEVIRMQDNNPFSFQSDVYSY 223
Query: 185 GVMLLEIIS 193
G++L E+++
Sbjct: 224 GIVLYELMT 232
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 100
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 101 VSLQSLPRFILMELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 159
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 160 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFM 218
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 219 EGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 33 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 92
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 93 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 151
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 152 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFM 210
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 211 EGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ D + + +D GLA+L+ + G + + PE T+K DV+SF
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 197 GILLTEIVT 205
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIG 115
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 116 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 174
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 175 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFM 233
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 234 EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 100
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 101 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 159
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 160 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFM 218
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 219 EGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIG 115
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 116 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 174
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 175 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFM 233
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 234 EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 24/138 (17%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG---YLPPEWFRNMPVTVKVDVYSF 184
+L+ +TV+ D GL++L + T + G ++ PE R+ P K DVYSF
Sbjct: 170 LLVDKKYTVKVCDFGLSRL----KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSF 225
Query: 185 GVMLLEIIS----------CRCVERQGSDPKTLEKPVMIAIQFVK-------EKPPLRPS 227
GV+L E+ + + V G K LE P + Q +P RPS
Sbjct: 226 GVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPS 285
Query: 228 LRIVALMLQSILEVPSPP 245
+ +L+ +++ PP
Sbjct: 286 FATIMDLLRPLIKSAVPP 303
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 115
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 116 VSLQSLPRFILMELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 174
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 175 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFM 233
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 234 EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 101
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 102 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 160
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 161 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFM 219
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 220 EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIG 101
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 102 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 160
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 161 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFM 219
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 220 EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 21/133 (15%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ + +D GLA+++ N+ G + + PE T+K DV+SF
Sbjct: 312 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 371
Query: 185 GVMLLEIIS--------------CRCVERQGSDPKTL---EKPVMIAIQFVKEKPPLRPS 227
G++L+EI++ R +ER P+ E+ I ++ K +P RP+
Sbjct: 372 GILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 431
Query: 228 LRIVALMLQSILE 240
+ QS+L+
Sbjct: 432 FEYI----QSVLD 440
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 58 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 117
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 118 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 176
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 177 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFM 235
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 236 EGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 48 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 107
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 108 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 166
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 167 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFM 225
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 226 EGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 46 APGDKTNIGVKKLDKVVHVAHHKNLVCLLGY--H-------IEQECRLLVYKFMHNRSIS 96
A D+ + +L + H+ H+N+V LLG H E C + F+ ++ +
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 147
Query: 97 SLLYECLRPTWQQRMQDCI---------------RDCWRTRALACRILLHDYFTVETSDL 141
L E RP ++D + ++C A +LL + + D
Sbjct: 148 DLDKEDGRPL---ELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 204
Query: 142 GLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
GLA+ +M + + G R ++ PE + TV+ DV+S+G++L EI S
Sbjct: 205 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 46 APGDKTNIGVKKLDKVVHVAHHKNLVCLLGY--H-------IEQECRLLVYKFMHNRSIS 96
A D+ + +L + H+ H+N+V LLG H E C + F+ ++ +
Sbjct: 80 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 139
Query: 97 SLLYECLRPTWQQRMQDCI---------------RDCWRTRALACRILLHDYFTVETSDL 141
L E RP ++D + ++C A +LL + + D
Sbjct: 140 DLDKEDGRPL---ELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 196
Query: 142 GLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
GLA+ +M + + G R ++ PE + TV+ DV+S+G++L EI S
Sbjct: 197 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 68 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 127
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 128 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 186
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 187 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPPEAFM 245
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 246 EGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 101
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 102 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 160
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 161 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK-WMPPEAFM 219
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 220 EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 59 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 118
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 119 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 177
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 178 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK-WMPPEAFM 236
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 237 EGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ + +D GLA+++ N+ G + + PE T+K DV+SF
Sbjct: 139 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 198
Query: 185 GVMLLEIISCRCVERQG-SDPKTL 207
G++L+EI++ + G S+P+ +
Sbjct: 199 GILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 35 GSFSTVYTGVLA--PGDKT--NIGVKKLDKV---------------VHVAHHKNLVCLLG 75
G+F VY G ++ P D + + VK L +V + +H+N+V +G
Sbjct: 82 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 141
Query: 76 YHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD---CWRTRALACRILLHD 132
++ R ++ + M + S L E RP Q + D R A C+ L +
Sbjct: 142 VSLQSLPRFILLELMAGGDLKSFLRET-RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 200
Query: 133 YF-------------------TVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFR 171
+F + D G+A+ + G M K ++PPE F
Sbjct: 201 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK-WMPPEAFM 259
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T K D +SFGV+L EI S
Sbjct: 260 EGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 67 HKNLVCLLGYHIEQECRLLVY----------KFMHNRSISSLLYECLRPTWQ---QRMQD 113
H NLV LLG +E++ L + ++ +R S L +CL + M+
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 123
Query: 114 CIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRN 172
+ + R LA R +L+ + + SD GL K Q TG K + PE R
Sbjct: 124 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVK-WTAPEALRE 179
Query: 173 MPVTVKVDVYSFGVMLLEIIS 193
+ K DV+SFG++L EI S
Sbjct: 180 AAFSTKSDVWSFGILLWEIYS 200
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 27/189 (14%)
Query: 31 KPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYH 77
K GG + VY GV T + VK L + V+ H NLV LLG
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 78 IEQECRLLVYKFMHNRSISSLLYECLRPT------------WQQRMQDCIRDCWRTRALA 125
+ +V ++M ++ L EC R M+ + + R LA
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLA 157
Query: 126 CRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
R L+ + V+ +D GL++L+ + G + + PE ++K DV++F
Sbjct: 158 ARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAF 217
Query: 185 GVMLLEIIS 193
GV+L EI +
Sbjct: 218 GVLLWEIAT 226
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 25/141 (17%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-----FRNMPV 175
R LA R +L + FTV+ +D GLA+ ++ + ++ R + LP +W +
Sbjct: 148 RDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR--LPVKWTALESLQTYRF 205
Query: 176 TVKVDVYSFGVMLLEIISCRCVERQGSDP----------KTLEKP-------VMIAIQFV 218
T K DV+SFGV+L E+++ + DP + L +P + Q
Sbjct: 206 TTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCW 265
Query: 219 KEKPPLRPSLRIVALMLQSIL 239
+ P +RP+ R++ ++ I+
Sbjct: 266 EADPAVRPTFRVLVGEVEQIV 286
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 67 HKNLVCLLGYHIEQECRLLVY----------KFMHNRSISSLLYECLRPTWQ---QRMQD 113
H NLV LLG +E++ L + ++ +R S L +CL + M+
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 114 CIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRN 172
+ + R LA R +L+ + + SD GL K Q TG K + PE R
Sbjct: 133 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVK-WTAPEALRE 188
Query: 173 MPVTVKVDVYSFGVMLLEIIS 193
+ K DV+SFG++L EI S
Sbjct: 189 KKFSTKSDVWSFGILLWEIYS 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY + +
Sbjct: 24 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 83
Query: 83 RLLVY-----KFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR------ILLH 131
++ H+ I +E ++ R D +++ R I LH
Sbjct: 84 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 143
Query: 132 DYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSF 184
+ TV+ D GLA + +Q + L+G + ++ PE R P + + DVY+F
Sbjct: 144 EDLTVKIGDFGLATVKSRWSGSHQFEQLSG---SILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 185 GVMLLEIISCR 195
G++L E+++ +
Sbjct: 201 GIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY + +
Sbjct: 21 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 80
Query: 83 RLLVY-----KFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR------ILLH 131
++ H+ I +E ++ R D +++ R I LH
Sbjct: 81 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 140
Query: 132 DYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSF 184
+ TV+ D GLA + +Q + L+G + ++ PE R P + + DVY+F
Sbjct: 141 EDLTVKIGDFGLATVKSRWSGSHQFEQLSG---SILWMAPEVIRMQDKNPYSFQSDVYAF 197
Query: 185 GVMLLEIISCR 195
G++L E+++ +
Sbjct: 198 GIVLYELMTGQ 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 30/142 (21%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFR----NMPV- 175
R LA R IL+ + + + +D GL++ + +++T G LP W N V
Sbjct: 163 RNLAARNILVGENYVAKIADFGLSRGQEVY-------VKKTMGRLPVRWMAIESLNYSVY 215
Query: 176 TVKVDVYSFGVMLLEIISC--------RCVERQGSDPKT--LEKPVM-------IAIQFV 218
T DV+S+GV+L EI+S C E P+ LEKP+ + Q
Sbjct: 216 TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCW 275
Query: 219 KEKPPLRPSLRIVALMLQSILE 240
+EKP RPS + + L +LE
Sbjct: 276 REKPYERPSFAQILVSLNRMLE 297
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY + +
Sbjct: 19 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 78
Query: 83 RLLVY-----KFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR------ILLH 131
++ H+ I +E ++ R D +++ R I LH
Sbjct: 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 138
Query: 132 DYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSF 184
+ TV+ D GLA + +Q + L+G + ++ PE R P + + DVY+F
Sbjct: 139 EDLTVKIGDFGLATEKSRWSGSHQFEQLSG---SILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 185 GVMLLEIISCR 195
G++L E+++ +
Sbjct: 196 GIVLYELMTGQ 206
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 30/142 (21%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFR----NMPV- 175
R LA R IL+ + + + +D GL++ + +++T G LP W N V
Sbjct: 166 RDLAARNILVGENYVAKIADFGLSRGQEVY-------VKKTMGRLPVRWMAIESLNYSVY 218
Query: 176 TVKVDVYSFGVMLLEIISC--------RCVERQGSDPKT--LEKPVM-------IAIQFV 218
T DV+S+GV+L EI+S C E P+ LEKP+ + Q
Sbjct: 219 TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCW 278
Query: 219 KEKPPLRPSLRIVALMLQSILE 240
+EKP RPS + + L +LE
Sbjct: 279 REKPYERPSFAQILVSLNRMLE 300
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY + +
Sbjct: 19 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 78
Query: 83 RLLVY-----KFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR------ILLH 131
++ H+ I +E ++ R D +++ R I LH
Sbjct: 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 138
Query: 132 DYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSF 184
+ TV+ D GLA + +Q + L+G + ++ PE R P + + DVY+F
Sbjct: 139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSG---SILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 185 GVMLLEIISCR 195
G++L E+++ +
Sbjct: 196 GIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY + +
Sbjct: 24 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 83
Query: 83 RLLVY-----KFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR------ILLH 131
++ H+ I +E ++ R D +++ R I LH
Sbjct: 84 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 143
Query: 132 DYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSF 184
+ TV+ D GLA + +Q + L+G + ++ PE R P + + DVY+F
Sbjct: 144 EDLTVKIGDFGLATVKSRWSGSHQFEQLSG---SILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 185 GVMLLEIISCR 195
G++L E+++ +
Sbjct: 201 GIVLYELMTGQ 211
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 30/142 (21%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFR----NMPV- 175
R LA R IL+ + + + +D GL++ + +++T G LP W N V
Sbjct: 156 RDLAARNILVGENYVAKIADFGLSRGQEVY-------VKKTMGRLPVRWMAIESLNYSVY 208
Query: 176 TVKVDVYSFGVMLLEIISC--------RCVERQGSDPKT--LEKPVM-------IAIQFV 218
T DV+S+GV+L EI+S C E P+ LEKP+ + Q
Sbjct: 209 TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCW 268
Query: 219 KEKPPLRPSLRIVALMLQSILE 240
+EKP RPS + + L +LE
Sbjct: 269 REKPYERPSFAQILVSLNRMLE 290
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 67 HKNLVCLLGYHIEQECRLLVY----------KFMHNRSISSLLYECLRPTWQ---QRMQD 113
H NLV LLG +E++ L + ++ +R S L +CL + M+
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 114 CIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRN 172
+ + R LA R +L+ + + SD GL K Q TG K + PE R
Sbjct: 305 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVK-WTAPEALRE 360
Query: 173 MPVTVKVDVYSFGVMLLEIIS 193
+ K DV+SFG++L EI S
Sbjct: 361 KKFSTKSDVWSFGILLWEIYS 381
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 67 HKNLVCLLGYHIEQECRLLVY----------KFMHNRSISSLLYECLRPTWQ---QRMQD 113
H NLV LLG +E++ L + ++ +R S L +CL + M+
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117
Query: 114 CIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRN 172
+ + R LA R +L+ + + SD GL K Q TG K + PE R
Sbjct: 118 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKLPVK-WTAPEALRE 173
Query: 173 MPVTVKVDVYSFGVMLLEIIS 193
+ K DV+SFG++L EI S
Sbjct: 174 KKFSTKSDVWSFGILLWEIYS 194
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY + +
Sbjct: 39 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 98
Query: 83 RLLVY-----KFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR------ILLH 131
++ H+ I +E ++ R D +++ R I LH
Sbjct: 99 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 158
Query: 132 DYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSF 184
+ TV+ D GLA + +Q + L+G + ++ PE R P + + DVY+F
Sbjct: 159 EDLTVKIGDFGLATEKSRWSGSHQFEQLSG---SILWMAPEVIRMQDKNPYSFQSDVYAF 215
Query: 185 GVMLLEIISCR 195
G++L E+++ +
Sbjct: 216 GIVLYELMTGQ 226
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY + +
Sbjct: 46 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 105
Query: 83 RLLVY-----KFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR------ILLH 131
++ H+ I +E ++ R D +++ R I LH
Sbjct: 106 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 165
Query: 132 DYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSF 184
+ TV+ D GLA + +Q + L+G + ++ PE R P + + DVY+F
Sbjct: 166 EDLTVKIGDFGLATVKSRWSGSHQFEQLSG---SILWMAPEVIRMQDKNPYSFQSDVYAF 222
Query: 185 GVMLLEIISCR 195
G++L E+++ +
Sbjct: 223 GIVLYELMTGQ 233
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY + +
Sbjct: 47 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 106
Query: 83 RLLVY-----KFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR------ILLH 131
++ H+ I +E ++ R D +++ R I LH
Sbjct: 107 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 166
Query: 132 DYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSF 184
+ TV+ D GLA + +Q + L+G + ++ PE R P + + DVY+F
Sbjct: 167 EDLTVKIGDFGLATEKSRWSGSHQFEQLSG---SILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 185 GVMLLEIISCR 195
G++L E+++ +
Sbjct: 224 GIVLYELMTGQ 234
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY + +
Sbjct: 47 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 106
Query: 83 RLLVY-----KFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR------ILLH 131
++ H+ I +E ++ R D +++ R I LH
Sbjct: 107 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 166
Query: 132 DYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSF 184
+ TV+ D GLA + +Q + L+G + ++ PE R P + + DVY+F
Sbjct: 167 EDLTVKIGDFGLATVKSRWSGSHQFEQLSG---SILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 185 GVMLLEIISCR 195
G++L E+++ +
Sbjct: 224 GIVLYELMTGQ 234
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 33/191 (17%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY +
Sbjct: 19 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL 78
Query: 83 RLLVY-----KFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR------ILLH 131
++ H+ I +E ++ R D +++ R I LH
Sbjct: 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH 138
Query: 132 DYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSF 184
+ TV+ D GLA + +Q + L+G + ++ PE R P + + DVY+F
Sbjct: 139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSG---SILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 185 GVMLLEIISCR 195
G++L E+++ +
Sbjct: 196 GIVLYELMTGQ 206
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 35/192 (18%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY + +
Sbjct: 35 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 94
Query: 83 RLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRT-----------RAL-ACRILL 130
+V ++ S+ L+ +++ D R R R L + I L
Sbjct: 95 -AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL 153
Query: 131 HDYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYS 183
H+ TV+ D GLA + +Q + L+G + ++ PE R + P + + DVY+
Sbjct: 154 HEDNTVKIGDFGLATEKSRWSGSHQFEQLSG---SILWMAPEVIRMQDSNPYSFQSDVYA 210
Query: 184 FGVMLLEIISCR 195
FG++L E+++ +
Sbjct: 211 FGIVLYELMTGQ 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 35/192 (18%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY + +
Sbjct: 23 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 82
Query: 83 RLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRT-----------RAL-ACRILL 130
+V ++ S+ L+ +++ D R R R L + I L
Sbjct: 83 -AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL 141
Query: 131 HDYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYS 183
H+ TV+ D GLA + +Q + L+G + ++ PE R + P + + DVY+
Sbjct: 142 HEDNTVKIGDFGLATVKSRWSGSHQFEQLSG---SILWMAPEVIRMQDSNPYSFQSDVYA 198
Query: 184 FGVMLLEIISCR 195
FG++L E+++ +
Sbjct: 199 FGIVLYELMTGQ 210
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 28/191 (14%)
Query: 29 LKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLG 75
+KK G F V+ G + T + VK L ++ H LV L
Sbjct: 17 VKKLGAGQFGEVWMGYY--NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA 74
Query: 76 YHIEQECRLLVYKFMHNRSISSLLY-----ECLRPTW-------QQRMQDCIRDCWRTRA 123
++E ++ +FM S+ L + L P + M R + R
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD 134
Query: 124 L-ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVY 182
L A +L+ + + +D GLA+++ N+ G + + PE T+K +V+
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 183 SFGVMLLEIIS 193
SFG++L EI++
Sbjct: 195 SFGILLYEIVT 205
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 22/137 (16%)
Query: 128 ILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+L+ +TV+ D GL++L ++ G E ++ PE R+ P K DVYSFG
Sbjct: 170 LLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPE---WMAPEVLRDEPSNEKSDVYSFG 226
Query: 186 VMLLEIIS----------CRCVERQGSDPKTLEKPVMIAIQFVK-------EKPPLRPSL 228
V+L E+ + + V G K LE P + Q +P RPS
Sbjct: 227 VILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSF 286
Query: 229 RIVALMLQSILEVPSPP 245
+ +L+ +++ PP
Sbjct: 287 ATIMDLLRPLIKSAVPP 303
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 380 ERMNYVHRDL-----RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 434
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 435 AALYGRFTIKSDVWSFGILLTELTT 459
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 114/296 (38%), Gaps = 80/296 (27%)
Query: 22 SFSHIYSLKKPCGGSFSTVYTG----VLAPGDKTNIGVKKLDKVVHVA------------ 65
S I L++ GSF VY G ++ +T + VK +++ +
Sbjct: 12 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 71
Query: 66 -----HHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQR-------MQD 113
HH +V LLG + + L+V + M + + S L LRP + +Q+
Sbjct: 72 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQE 128
Query: 114 CIRDCWRT--------------RALACR--ILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
I+ R LA R ++ HD FTV+ D G+ + + +T
Sbjct: 129 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDI----XETDXX 183
Query: 158 MRETKGYLP-----PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG----------S 202
+ KG LP PE ++ T D++SFGV+L EI S QG
Sbjct: 184 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 243
Query: 203 DPKTLEKP----------VMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSPPCSF 248
D L++P + + QF P +RP+ + +L+ L P SF
Sbjct: 244 DGGYLDQPDNCPERVTDLMRMCWQF---NPKMRPTFLEIVNLLKDDLHPSFPEVSF 296
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 35/192 (18%)
Query: 35 GSFSTVYTG------------VLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQEC 82
GSF TVY G V AP + K V+ H N++ +GY +
Sbjct: 35 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL 94
Query: 83 RLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRT-----------RAL-ACRILL 130
+V ++ S+ L+ +++ D R R R L + I L
Sbjct: 95 -AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL 153
Query: 131 HDYFTVETSDLGLA----KLLMINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYS 183
H+ TV+ D GLA + +Q + L+G + ++ PE R + P + + DVY+
Sbjct: 154 HEDNTVKIGDFGLATEKSRWSGSHQFEQLSG---SILWMAPEVIRMQDSNPYSFQSDVYA 210
Query: 184 FGVMLLEIISCR 195
FG++L E+++ +
Sbjct: 211 FGIVLYELMTGQ 222
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 114/296 (38%), Gaps = 80/296 (27%)
Query: 22 SFSHIYSLKKPCGGSFSTVYTG----VLAPGDKTNIGVKKLDKVVHVA------------ 65
S I L++ GSF VY G ++ +T + VK +++ +
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 66 -----HHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQR-------MQD 113
HH +V LLG + + L+V + M + + S L LRP + +Q+
Sbjct: 75 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQE 131
Query: 114 CIRDCWRT--------------RALACR--ILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
I+ R LA R ++ HD FTV+ D G+ + + +T
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDI----XETDXX 186
Query: 158 MRETKGYLP-----PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG----------S 202
+ KG LP PE ++ T D++SFGV+L EI S QG
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
Query: 203 DPKTLEKP----------VMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSPPCSF 248
D L++P + + QF P +RP+ + +L+ L P SF
Sbjct: 247 DGGYLDQPDNCPERVTDLMRMCWQF---NPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 97/240 (40%), Gaps = 57/240 (23%)
Query: 22 SFSHIYSLKKPCGGSFSTVYTG----VLAPGDKTNIGVKKLDKVVHVA------------ 65
S I L++ GSF VY G ++ +T + VK +++ +
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 66 -----HHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQR-------MQD 113
HH +V LLG + + L+V + M + + S L LRP + +Q+
Sbjct: 75 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQE 131
Query: 114 CIRDCWRT--------------RALACR--ILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
I+ R LA R ++ HD FTV+ D G+ + + +T
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDI----XETDXX 186
Query: 158 MRETKGYLP-----PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVM 212
+ KG LP PE ++ T D++SFGV+L EI S QG + + K VM
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 185 GVMLLEIIS 193
G++L E+ +
Sbjct: 202 GILLTELTT 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 132 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 191
Query: 185 GVMLLEIIS 193
G++L E+ +
Sbjct: 192 GILLTELTT 200
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A +L+ + + +D GLA+++ N+ G + + PE T+K DV+SF
Sbjct: 138 AANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSF 197
Query: 185 GVMLLEIIS 193
G++L EI++
Sbjct: 198 GILLYEIVT 206
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 131 ERMNYVHRDL-----AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 297 ERMNYVHRDL-----RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 297 ERMNYVHRDL-----RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 297 ERMNYVHRDL-----RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 185 GVMLLEIIS 193
G++L E+ +
Sbjct: 202 GILLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 185 GVMLLEIIS 193
G++L E+ +
Sbjct: 202 GILLTELTT 210
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 28/176 (15%)
Query: 46 APGDKTNIGVKKLDKVVHVAHHKNLVCLLGY--H-------IEQECRLLVYKFMHNRSIS 96
A D+ + +L + H+ H+N+V LLG H E C + F+ +
Sbjct: 88 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPP 147
Query: 97 SLLYE---CLRPTWQQRMQDCI---------------RDCWRTRALACRILLHDYFTVET 138
L Y P Q +D + ++C A +LL + +
Sbjct: 148 GLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 207
Query: 139 SDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
D GLA+ +M + + G R ++ PE + TV+ DV+S+G++L EI S
Sbjct: 208 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 131 ERMNYVHRDL-----RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 185 GVMLLEIIS 193
G++L E+ +
Sbjct: 202 GILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 124 ERMNYVHRDL-----RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 178
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTT 203
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 131 ERMNYVHRDL-----RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 128 ERMNYVHRDL-----RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 182
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 120 ERMNYVHRDL-----RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 174
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 185 GVMLLEIIS 193
G++L E+ +
Sbjct: 202 GILLTELTT 210
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 114/296 (38%), Gaps = 80/296 (27%)
Query: 22 SFSHIYSLKKPCGGSFSTVYTG----VLAPGDKTNIGVKKLDKVVHVA------------ 65
S I L++ GSF VY G ++ +T + VK +++ +
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 66 -----HHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQR-------MQD 113
HH +V LLG + + L+V + M + + S L LRP + +Q+
Sbjct: 75 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQE 131
Query: 114 CIRDCWRT--------------RALACR--ILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
I+ R LA R ++ HD FTV+ D G+ + + +T
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIY----ETAYY 186
Query: 158 MRETKGYLP-----PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG----------S 202
+ KG LP PE ++ T D++SFGV+L EI S QG
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
Query: 203 DPKTLEKP----------VMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSPPCSF 248
D L++P + + QF P +RP+ + +L+ L P SF
Sbjct: 247 DGGYLDQPDNCPERVTDLMRMCWQF---NPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ + + +D GLA+L+ N+ G + + PE T+K DV+SF
Sbjct: 133 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 185 GVMLLEIIS 193
G++L E+ +
Sbjct: 193 GILLTELTT 201
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 128 ERMNYVHRDL-----RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPE 182
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVML 188
V+ +D GLA + +N ++ G T GYL PE + P + VD+++ GV+L
Sbjct: 145 AVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVML 188
V+ +D GLA + +N ++ G T GYL PE + P + VD+++ GV+L
Sbjct: 146 AVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
Query: 122 RALACRILLHDY-FTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVD 180
R LA R L D V+ SD G+ + ++ +Q + G + + PE F + K D
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 181 VYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSL---RIVALMLQS 237
V++FG+++ E+ S G P L + ++ + RP L I +M
Sbjct: 188 VWAFGILMWEVFSL------GKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSC 241
Query: 238 ILEVPSPPCSF 248
E+P +F
Sbjct: 242 WHELPEKRPTF 252
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVML 188
V+ +D GLA + +N ++ G T GYL PE + P + VD+++ GV+L
Sbjct: 146 AVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 116 RDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMP 174
++C A +LL + + D GLA+ +M + + G R ++ PE +
Sbjct: 177 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 236
Query: 175 VTVKVDVYSFGVMLLEIIS 193
TV+ DV+S+G++L EI S
Sbjct: 237 YTVQSDVWSYGILLWEIFS 255
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 114/296 (38%), Gaps = 80/296 (27%)
Query: 22 SFSHIYSLKKPCGGSFSTVYTG----VLAPGDKTNIGVKKLDKVVHVA------------ 65
S I L++ GSF VY G ++ +T + VK +++ +
Sbjct: 14 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 73
Query: 66 -----HHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQR-------MQD 113
HH +V LLG + + L+V + M + + S L LRP + +Q+
Sbjct: 74 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQE 130
Query: 114 CIRDCWRT--------------RALACR--ILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
I+ R LA R ++ HD FTV+ D G+ + + +T
Sbjct: 131 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIY----ETDYY 185
Query: 158 MRETKGYLP-----PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG----------S 202
+ KG LP PE ++ T D++SFGV+L EI S QG
Sbjct: 186 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 245
Query: 203 DPKTLEKP----------VMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSPPCSF 248
D L++P + + QF P +RP+ + +L+ L P SF
Sbjct: 246 DGGYLDQPDNCPERVTDLMRMCWQF---NPKMRPTFLEIVNLLKDDLHPSFPEVSF 298
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD + IL+ + + +D GLA+L+ N+ G + + PE
Sbjct: 122 ERMNYIHRDL-----RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+++
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVT 201
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 116 RDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMP 174
++C A +LL + + D GLA+ +M + + G R ++ PE +
Sbjct: 183 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 242
Query: 175 VTVKVDVYSFGVMLLEIIS 193
TV+ DV+S+G++L EI S
Sbjct: 243 YTVQSDVWSYGILLWEIFS 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 116 RDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMP 174
++C A +LL + + D GLA+ +M + + G R ++ PE +
Sbjct: 183 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 242
Query: 175 VTVKVDVYSFGVMLLEIIS 193
TV+ DV+S+G++L EI S
Sbjct: 243 YTVQSDVWSYGILLWEIFS 261
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 114/296 (38%), Gaps = 80/296 (27%)
Query: 22 SFSHIYSLKKPCGGSFSTVYTG----VLAPGDKTNIGVKKLDKVVHVA------------ 65
S I L++ GSF VY G ++ +T + VK +++ +
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 66 -----HHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQR-------MQD 113
HH +V LLG + + L+V + M + + S L LRP + +Q+
Sbjct: 75 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQE 131
Query: 114 CIRDCWRT--------------RALACR--ILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
I+ R LA R ++ HD FTV+ D G+ + + +T
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIY----ETDYY 186
Query: 158 MRETKGYLP-----PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG----------S 202
+ KG LP PE ++ T D++SFGV+L EI S QG
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
Query: 203 DPKTLEKP----------VMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSPPCSF 248
D L++P + + QF P +RP+ + +L+ L P SF
Sbjct: 247 DGGYLDQPDNCPERVTDLMRMCWQF---NPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 114/296 (38%), Gaps = 80/296 (27%)
Query: 22 SFSHIYSLKKPCGGSFSTVYTG----VLAPGDKTNIGVKKLDKVVHVA------------ 65
S I L++ GSF VY G ++ +T + VK +++ +
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 66 -----HHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQR-------MQD 113
HH +V LLG + + L+V + M + + S L LRP + +Q+
Sbjct: 75 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQE 131
Query: 114 CIRDCWRT--------------RALACR--ILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
I+ R LA R ++ HD FTV+ D G+ + + +T
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIY----ETDYY 186
Query: 158 MRETKGYLP-----PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG----------S 202
+ KG LP PE ++ T D++SFGV+L EI S QG
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
Query: 203 DPKTLEKP----------VMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSPPCSF 248
D L++P + + QF P +RP+ + +L+ L P SF
Sbjct: 247 DGGYLDQPDNCPERVTDLMRMCWQF---NPNMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 114/296 (38%), Gaps = 80/296 (27%)
Query: 22 SFSHIYSLKKPCGGSFSTVYTG----VLAPGDKTNIGVKKLDKVVHVA------------ 65
S I L++ GSF VY G ++ +T + VK +++ +
Sbjct: 16 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 75
Query: 66 -----HHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQR-------MQD 113
HH +V LLG + + L+V + M + + S L LRP + +Q+
Sbjct: 76 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQE 132
Query: 114 CIRDCWRT--------------RALACR--ILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
I+ R LA R ++ HD FTV+ D G+ + + +T
Sbjct: 133 MIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIY----ETDYY 187
Query: 158 MRETKGYLP-----PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG----------S 202
+ KG LP PE ++ T D++SFGV+L EI S QG
Sbjct: 188 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 247
Query: 203 DPKTLEKP----------VMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSPPCSF 248
D L++P + + QF P +RP+ + +L+ L P SF
Sbjct: 248 DGGYLDQPDNCPERVTDLMRMCWQF---NPNMRPTFLEIVNLLKDDLHPSFPEVSF 300
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 20/102 (19%)
Query: 129 LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG--------------YLPPEWFRNMP 174
L+ + V +D GLA+L++ +TQ G+R K ++ PE
Sbjct: 140 LVRENKNVVVADFGLARLMVDEKTQP-EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS 198
Query: 175 VTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQ 216
KVDV+SFG++L EII R +DP L + + +
Sbjct: 199 YDEKVDVFSFGIVLCEIIG-----RVNADPDYLPRTMDFGLN 235
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 109 QRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE 168
+RM RD A IL+ + + +D GL +L+ N+ G + + PE
Sbjct: 298 ERMNYVHRDL-----RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPE 352
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
T+K DV+SFG++L E+ +
Sbjct: 353 AALYGRFTIKSDVWSFGILLTELTT 377
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVML 188
V+ +D GLA + +N ++ G T GYL PE + P + VD+++ GV+L
Sbjct: 169 AVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 20/145 (13%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + +++ +FM N S+ S L + LR M+
Sbjct: 67 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI-AAGMKYL 125
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP-----PE 168
+ RALA R IL++ + SD GL++ L + T T G +P PE
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTAPE 184
Query: 169 WFRNMPVTVKVDVYSFGVMLLEIIS 193
+ T DV+S+G+++ E++S
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 232 DVWSFGVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 163 RDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 222
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 223 DVWSFGVLLWEIFS 236
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 81/212 (38%), Gaps = 46/212 (21%)
Query: 28 SLKKPCG-GSFSTVYTGVLAPGDKT----NIGVKKLDK----------------VVHVAH 66
+L KP G G+F V DKT + VK L + ++H+ H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 67 HKNLVCLLG-----------------------YHIEQECRLLVYKFMHNRSISSLLYECL 103
H N+V LLG Y + + YK ++ ++ C
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 104 RPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRET 161
+ M+ R LA R ILL + V+ D GLA+ + + G R
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 162 KGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
++ PE + T++ DV+SFGV+L EI S
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 232 DVWSFGVLLWEIFS 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 232 DVWSFGVLLWEIFS 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 55 VKKLDKVVHVAHHKNLVCLLGYHIEQECRLLV-YKFMHNRSISSLLYECLRPTWQQRMQD 113
+ +L ++H+ HH N+V LLG + L+V +F ++S+ L + +D
Sbjct: 80 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPED 139
Query: 114 CIRDCWR------------------------TRALACR-ILLHDYFTVETSDLGLAKLLM 148
+D R LA R ILL + V+ D GLA+ +
Sbjct: 140 LYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 149 INQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
+ G R ++ PE + T++ DV+SFGV+L EI S
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 163 RDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 222
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 223 DVWSFGVLLWEIFS 236
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 168 RDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 227
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 228 DVWSFGVLLWEIFS 241
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 55 VKKLDKVVHVAHHKNLVCLLGYHIEQECRLLV-YKFMHNRSISSLLYECLRP--TWQQRM 111
+ +L ++H+ HH N+V LLG + L+V +F ++S+ L +++
Sbjct: 80 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAP 139
Query: 112 QDCIRD--------CWR----------------TRALACR-ILLHDYFTVETSDLGLAKL 146
+D +D C+ R LA R ILL + V+ D GLA+
Sbjct: 140 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 199
Query: 147 LMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
+ + G R ++ PE + T++ DV+SFGV+L EI S
Sbjct: 200 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 163 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 222
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 223 DVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 232 DVWSFGVLLWEIFS 245
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 215 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 274
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 275 DVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 217 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 276
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 277 DVWSFGVLLWEIFS 290
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 163 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 222
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 223 DVWSFGVLLWEIFS 236
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 222 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 281
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 282 DVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 224 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 283
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 284 DVWSFGVLLWEIFS 297
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + + G R ++ PE + T++
Sbjct: 209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 268
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI S
Sbjct: 269 DVWSFGVLLWEIFS 282
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 30 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 87
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP + +M I D
Sbjct: 88 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R ++ + FTV+ D G+ + + +T + KG LP
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI----XETDXXRKGGKGLLPVRWMS 202
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 237
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 21 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 78
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP + +M I D
Sbjct: 79 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R ++ + FTV+ D G+ + + +T + KG LP
Sbjct: 138 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI----XETDXXRKGGKGLLPVRWMS 193
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 228
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 20/192 (10%)
Query: 21 GSFSHIYS--LKKPCGGSFSTVYTGVLAPG--DKTNIGVKKLDKVVHVAHHKNLVCLLGY 76
G F +Y LK G V L G +K + ++ H N++ L G
Sbjct: 55 GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGV 114
Query: 77 HIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDCIRDCWRTRAL 124
+ + +++ ++M N ++ L E LR M+ + R L
Sbjct: 115 ISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGI-AAGMKYLANMNYVHRDL 173
Query: 125 ACR-ILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRNMPVTVKVDV 181
A R IL++ + SD GL+++L + T T +G + + PE T DV
Sbjct: 174 AARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDV 233
Query: 182 YSFGVMLLEIIS 193
+SFG+++ E+++
Sbjct: 234 WSFGIVMWEVMT 245
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + V+ D GLA+ + N G R ++ PE + + K
Sbjct: 223 RDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKS 282
Query: 180 DVYSFGVMLLEIIS 193
DV+S+GV+L EI S
Sbjct: 283 DVWSYGVLLWEIFS 296
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 36/223 (16%)
Query: 9 EADPSQYEN-RVFG--SFSHIYSLKKPCGGSFSTVYT------GVLAPGDKTNIGVKKLD 59
+ADPSQ+E +V G SF ++ +KK G +Y L D+ +++ D
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER-D 79
Query: 60 KVVHVAHHKNLVCLLGYHIEQECRL-LVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDC 118
+V V H + L Y + E +L L+ F+ + + L + + T ++ ++
Sbjct: 80 ILVEVNH--PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-----EEDVKFY 132
Query: 119 WRTRALAC----------------RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
ALA ILL + ++ +D GL+K I+ + T
Sbjct: 133 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTV 191
Query: 163 GYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPK 205
Y+ PE T D +SFGV++ E+++ + QG D K
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG-TLPFQGKDRK 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 36/223 (16%)
Query: 9 EADPSQYEN-RVFG--SFSHIYSLKKPCGGSFSTVYT------GVLAPGDKTNIGVKKLD 59
+ADPSQ+E +V G SF ++ +KK G +Y L D+ +++ D
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER-D 78
Query: 60 KVVHVAHHKNLVCLLGYHIEQECRL-LVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDC 118
+V V H + L Y + E +L L+ F+ + + L + + T ++ ++
Sbjct: 79 ILVEVNH--PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-----EEDVKFY 131
Query: 119 WRTRALAC----------------RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
ALA ILL + ++ +D GL+K I+ + T
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTV 190
Query: 163 GYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPK 205
Y+ PE T D +SFGV++ E+++ + QG D K
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG-TLPFQGKDRK 232
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 36/223 (16%)
Query: 9 EADPSQYEN-RVFG--SFSHIYSLKKPCGGSFSTVYT------GVLAPGDKTNIGVKKLD 59
+ADPSQ+E +V G SF ++ +KK G +Y L D+ +++ D
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER-D 78
Query: 60 KVVHVAHHKNLVCLLGYHIEQECRL-LVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDC 118
+V V H + L Y + E +L L+ F+ + + L + + T ++ ++
Sbjct: 79 ILVEVNH--PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-----EEDVKFY 131
Query: 119 WRTRALAC----------------RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
ALA ILL + ++ +D GL+K I+ + T
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSFCGTV 190
Query: 163 GYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPK 205
Y+ PE T D +SFGV++ E+++ + QG D K
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG-TLPFQGKDRK 232
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V ++M N S+ S L + LR M+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 163
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GLA++L + T G + + PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R +L+ V+ D GLA+ +M + + G R ++ PE T+K
Sbjct: 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKS 255
Query: 180 DVYSFGVMLLEIIS 193
DV+S+G++L EI S
Sbjct: 256 DVWSYGILLWEIFS 269
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDC-------- 118
H N++ L G + +++ +FM N S+ S L + ++ +R
Sbjct: 93 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 119 ---WRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP-----PEW 169
+ R LA R IL++ + SD GL++ L + T T G +P PE
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 170 FRNMPVTVKVDVYSFGVMLLEIIS 193
+ T DV+S+G+++ E++S
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 93
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP + +M I D
Sbjct: 94 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R ++ + FTV+ D G+ + + +T + KG LP
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----ETDYYRKGGKGLLPVRWMS 208
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 29/159 (18%)
Query: 106 TWQ--QRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
WQ Q MQ R LA R IL+ + ++ SD GL++ + + + ++ ++
Sbjct: 156 AWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSXVKRSQ 211
Query: 163 GYLPPEWFR-----NMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTL---------- 207
G +P +W + T + DV+SFGV+L EI++ G P+ L
Sbjct: 212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
Query: 208 EKP-------VMIAIQFVKEKPPLRPSLRIVALMLQSIL 239
E+P + +Q K++P RP ++ L+ ++
Sbjct: 272 ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 29 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 86
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP + +M I D
Sbjct: 87 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R ++ + FTV+ D G+ + + +T + KG LP
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----ETDYYRKGGKGLLPVRWMS 201
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 236
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 83/193 (43%), Gaps = 32/193 (16%)
Query: 66 HHKNLVCLLGYHIEQECRLLVYKF--------------MHNRSISSLLYECLRPTWQQRM 111
HH N+V + ++ + +V +F M+ I+++ LR
Sbjct: 100 HHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHN 159
Query: 112 QDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLM--INQTQTLTGMRETKGYLPPEW 169
Q I ++ + ILL ++ SD G + + + + L G T ++ PE
Sbjct: 160 QGVIHRDIKSDS----ILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVG---TPYWMAPEV 212
Query: 170 FRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEK-PPLRPSL 228
+P +VD++S G+M++E+I +P +P + A++ +++ PP L
Sbjct: 213 ISRLPYGTEVDIWSLGIMVIEMID--------GEPPYFNEPPLQAMRRIRDSLPPRVKDL 264
Query: 229 RIVALMLQSILEV 241
V+ +L+ L++
Sbjct: 265 HKVSSVLRGFLDL 277
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 30 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 87
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP + +M I D
Sbjct: 88 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R ++ + FTV+ D G+ + + +T + KG LP
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----ETDYYRKGGKGLLPVRWMS 202
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 237
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 45/219 (20%)
Query: 12 PSQYENRVFGSFSHIYSLKKPCGGSFSTVYTGVLAP------------------GDKTNI 53
P+Q + R+ + + +K G+F TVY G+ P G K N+
Sbjct: 27 PNQAQLRILKE-TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 85
Query: 54 GVKKLDKVVHVAHHKNLVCLLGYHIEQECR----------LLVYKFMHNRSISS--LLYE 101
++ H +LV LLG + + LL Y H +I S LL
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 145
Query: 102 CLRPTWQQRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRET 161
C++ + R R A A +L+ V+ +D GLA+LL ++ +
Sbjct: 146 CVQIAKGMMYLEERRLVHRDLA-ARNVLVKSPNHVKITDFGLARLLEGDEKE----YNAD 200
Query: 162 KGYLPPEW-------FRNMPVTVKVDVYSFGVMLLEIIS 193
G +P +W +R T + DV+S+GV + E+++
Sbjct: 201 GGKMPIKWMALECIHYRKF--THQSDVWSYGVTIWELMT 237
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 80
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP + +M I D
Sbjct: 81 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R ++ + FTV+ D G+ + + +T + KG LP
Sbjct: 140 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----ETDYYRKGGKGLLPVRWMS 195
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 230
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 29 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 86
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP + +M I D
Sbjct: 87 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R ++ + FTV+ D G+ + + +T + KG LP
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----ETDYYRKGGKGLLPVRWMS 201
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 236
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
IL++ ++ D G++ L+ + + G T+ Y+ PE + +V+ D++S G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 186 VMLLEIISCRCVERQGSDPKTLEKPVMIAIQF----VKEKPPLRPS 227
+ L+E+ R D K +P M + V E PP PS
Sbjct: 191 LSLVEMAVGR-YPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPS 235
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ V+ +D GLAKLL +++ + +RE + PE + +
Sbjct: 135 RDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV--VREPGQSPIFWYAPESLSDNIFS 192
Query: 177 VKVDVYSFGVMLLEIIS 193
+ DV+SFGV+L E+ +
Sbjct: 193 RQSDVWSFGVVLYELFT 209
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 58 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 115
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP + +M I D
Sbjct: 116 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R ++ + FTV+ D G+ + + +T + KG LP
Sbjct: 175 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----ETDYYRKGGKGLLPVRWMS 230
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 231 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 265
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 27 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 84
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP + +M I D
Sbjct: 85 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R ++ + FTV+ D G+ + + +T + KG LP
Sbjct: 144 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----ETDYYRKGGKGLLPVRWMS 199
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVML 188
V+ +D GLA + + + Q G T GYL PE R P VD+++ GV+L
Sbjct: 171 AVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 128 ILLHDYFTVETSDLGLAKLLM--INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+L HD V+ SD G + + + + L G T ++ PE +P +VD++S G
Sbjct: 279 LLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVG---TPYWMAPELISRLPYGPEVDIWSLG 334
Query: 186 VMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEK-PPLRPSLRIVALMLQSILE 240
+M++E++ +P +P + A++ +++ PP +L V+ L+ L+
Sbjct: 335 IMVIEMVD--------GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 382
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLL------YECLRPTWQQR-----MQDCI 115
H N+V L G + ++V +FM N ++ + L + ++ R M+
Sbjct: 103 HPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 116 RDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRN 172
+ R LA R IL++ + SD GL++++ + T TG + + PE +
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 173 MPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G+++ E++S
Sbjct: 223 RKFTSASDVWSYGIVMWEVMS 243
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 41/217 (18%)
Query: 12 PSQYENRVFGSFSHIYSLKKPCGGSFSTVYTGVLAP------------------GDKTNI 53
P+Q + R+ + + +K G+F TVY G+ P G K N+
Sbjct: 4 PNQAQLRILKE-TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 62
Query: 54 GVKKLDKVVHVAHHKNLVCLLGYHIEQECR----------LLVYKFMHNRSISS--LLYE 101
++ H +LV LLG + + LL Y H +I S LL
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 122
Query: 102 CLRPTWQQRMQDCIRDCWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRET 161
C++ + R R A A +L+ V+ +D GLA+LL ++ +
Sbjct: 123 CVQIAKGMMYLEERRLVHRDLA-ARNVLVKSPNHVKITDFGLARLLEGDEKE----YNAD 177
Query: 162 KGYLPPEWF-----RNMPVTVKVDVYSFGVMLLEIIS 193
G +P +W T + DV+S+GV + E+++
Sbjct: 178 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 128 ILLHDYFTVETSDLGLAKLLM--INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+L HD V+ SD G + + + + L G T ++ PE +P +VD++S G
Sbjct: 202 LLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVG---TPYWMAPELISRLPYGPEVDIWSLG 257
Query: 186 VMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEK-PPLRPSLRIVALMLQSILE 240
+M++E++ +P +P + A++ +++ PP +L V+ L+ L+
Sbjct: 258 IMVIEMVD--------GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 305
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V ++M N S+ S L + LR M+
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 151
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GL+++L + T G + + PE
Sbjct: 152 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 211
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V ++M N S+ S L + LR M+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 163
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GL+++L + T G + + PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAK-LLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKV 179
R LA R +L+ + ++ +D GLA+ + I+ + T R ++ PE + T +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI +
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V ++M N S+ S L + LR M+
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 134
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GL+++L + T G + + PE
Sbjct: 135 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V ++M N S+ S L + LR M+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 163
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GL+++L + T G + + PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V ++M N S+ S L + LR M+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 163
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GL+++L + T G + + PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 84/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 93
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP +M I D
Sbjct: 94 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R ++ + FTV+ D G+ + + +T + KG LP
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----ETDYYRKGGKGLLPVRWMS 208
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V ++M N S+ S L + LR M+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 163
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GL ++L + T G + + PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVML 188
V+ +D GLA + + + Q G T GYL PE R P VD+++ GV+L
Sbjct: 162 AVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V ++M N S+ S L + LR M+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 163
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GL+++L + T G + + PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-----RNMPV 175
R LA R +LL + SD GL+K L ++ +T G P +W+
Sbjct: 494 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA---QTHGKWPVKWYAPECINYYKF 550
Query: 176 TVKVDVYSFGVMLLEIIS 193
+ K DV+SFGV++ E S
Sbjct: 551 SSKSDVWSFGVLMWEAFS 568
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + ++ +D GLA+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + ++ +D GLA+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V ++M N S+ S L + LR M+
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 161
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GL+++L + T G + + PE
Sbjct: 162 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 221
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 222 YRKFTSASDVWSYGIVLWEVMS 243
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVML 188
V+ +D GLA + +Q Q G T GYL PE R P VD+++ GV+L
Sbjct: 144 AVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-----RNMPV 175
R LA R +LL + SD GL+K L ++ +T G P +W+
Sbjct: 493 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA---QTHGKWPVKWYAPECINYYKF 549
Query: 176 TVKVDVYSFGVMLLEIIS 193
+ K DV+SFGV++ E S
Sbjct: 550 SSKSDVWSFGVLMWEAFS 567
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-----RNMPV 175
R LA R +LL + SD GL+K L ++ +T G P +W+
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENXYKA---QTHGKWPVKWYAPECINYYKF 191
Query: 176 TVKVDVYSFGVMLLEIIS 193
+ K DV+SFGV++ E S
Sbjct: 192 SSKSDVWSFGVLMWEAFS 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 29/159 (18%)
Query: 106 TWQ--QRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
WQ Q MQ R LA R IL+ + ++ SD GL++ + + + ++ ++
Sbjct: 156 AWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSXVKRSQ 211
Query: 163 GYLPPEWFR-----NMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTL---------- 207
G +P +W + T + DV+SFGV+L EI++ G P+ L
Sbjct: 212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
Query: 208 EKP-------VMIAIQFVKEKPPLRPSLRIVALMLQSIL 239
E+P + +Q K++P RP ++ L+ ++
Sbjct: 272 ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ V+ +D GLAKLL +++ + +RE + PE + +
Sbjct: 138 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV--VREPGQSPIFWYAPESLSDNIFS 195
Query: 177 VKVDVYSFGVMLLEIIS 193
+ DV+SFGV+L E+ +
Sbjct: 196 RQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ V+ +D GLAKLL +++ + +RE + PE + +
Sbjct: 139 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV--VREPGQSPIFWYAPESLSDNIFS 196
Query: 177 VKVDVYSFGVMLLEIIS 193
+ DV+SFGV+L E+ +
Sbjct: 197 RQSDVWSFGVVLYELFT 213
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 128 ILLHDYFTVETSDLGLAKLLM--INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+L HD V+ SD G + + + + L G T ++ PE +P +VD++S G
Sbjct: 159 LLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVG---TPYWMAPELISRLPYGPEVDIWSLG 214
Query: 186 VMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEK-PPLRPSLRIVALMLQSILE 240
+M++E++ +P +P + A++ +++ PP +L V+ L+ L+
Sbjct: 215 IMVIEMVD--------GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 262
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 39/196 (19%)
Query: 34 GGSFSTVYTGVL-APGDKTN-IGVKKLD---------------KVVHVAHHKNLVCLLGY 76
G F V G L APG K + + +K L ++ H N++ L G
Sbjct: 26 AGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGV 85
Query: 77 HIEQECRLLVYKFMHNRSISSLL------YECLRPTWQQR-----MQDCIRDCWRTRALA 125
+++ +FM N ++ S L + ++ R M+ + R LA
Sbjct: 86 VTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLA 145
Query: 126 CR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-------FRNMPVTV 177
R IL++ + SD GL++ L N + T G +P W FR T
Sbjct: 146 ARNILVNSNLVCKVSDFGLSRFLEENSSDP-TETSSLGGKIPIRWTAPEAIAFRKF--TS 202
Query: 178 KVDVYSFGVMLLEIIS 193
D +S+G+++ E++S
Sbjct: 203 ASDAWSYGIVMWEVMS 218
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ V+ +D GLAKLL +++ + +RE + PE + +
Sbjct: 151 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV--VREPGQSPIFWYAPESLSDNIFS 208
Query: 177 VKVDVYSFGVMLLEIIS 193
+ DV+SFGV+L E+ +
Sbjct: 209 RQSDVWSFGVVLYELFT 225
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 128 ILLHDYFTVETSDLGLAKLLM--INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+L HD V+ SD G + + + + L G T ++ PE +P +VD++S G
Sbjct: 152 LLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVG---TPYWMAPELISRLPYGPEVDIWSLG 207
Query: 186 VMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEK-PPLRPSLRIVALMLQSILE 240
+M++E++ +P +P + A++ +++ PP +L V+ L+ L+
Sbjct: 208 IMVIEMVD--------GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 255
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVML 188
V+ +D GLA + +Q Q G T GYL PE R P VD+++ GV+L
Sbjct: 144 AVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 128 ILLHDYFTVETSDLGLAKLLM--INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+L HD V+ SD G + + + + L G T ++ PE +P +VD++S G
Sbjct: 148 LLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVG---TPYWMAPELISRLPYGPEVDIWSLG 203
Query: 186 VMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEK-PPLRPSLRIVALMLQSILE 240
+M++E++ +P +P + A++ +++ PP +L V+ L+ L+
Sbjct: 204 IMVIEMVD--------GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 251
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
IL++ ++ D G++ L+ + + G T+ Y+ PE + +V+ D++S G
Sbjct: 153 SNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMSPERLQGTHYSVQSDIWSMG 209
Query: 186 VMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPLRPS 227
+ L+E+ R GS + + V E PP PS
Sbjct: 210 LSLVEMAVGRYPIGSGSGSMAI---FELLDYIVNEPPPKLPS 248
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 128 ILLHDYFTVETSDLGLAKLLM--INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+L HD V+ SD G + + + + L G T ++ PE +P +VD++S G
Sbjct: 157 LLTHD-GRVKLSDFGFCAQVSKEVPRRKXLVG---TPYWMAPELISRLPYGPEVDIWSLG 212
Query: 186 VMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEK-PPLRPSLRIVALMLQSILE 240
+M++E++ +P +P + A++ +++ PP +L V+ L+ L+
Sbjct: 213 IMVIEMVD--------GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLD 260
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + ++ +D GLA+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 209 NIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-----RNMPV 175
R LA R +LL + SD GL+K L ++ +T G P +W+
Sbjct: 129 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA---QTHGKWPVKWYAPECINYYKF 185
Query: 176 TVKVDVYSFGVMLLEIIS 193
+ K DV+SFGV++ E S
Sbjct: 186 SSKSDVWSFGVLMWEAFS 203
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V ++M N S+ S L + LR M+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 163
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GL+++L + T G + + PE
Sbjct: 164 SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAK-LLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKV 179
R LA R +L+ + ++ +D GLA+ + I+ + T R ++ PE + T +
Sbjct: 159 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 218
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI +
Sbjct: 219 DVWSFGVLLWEIFT 232
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-----RNMPV 175
R LA R +LL + SD GL+K L ++ +T G P +W+
Sbjct: 149 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA---QTHGKWPVKWYAPECINYYKF 205
Query: 176 TVKVDVYSFGVMLLEIIS 193
+ K DV+SFGV++ E S
Sbjct: 206 SSKSDVWSFGVLMWEAFS 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVML 188
V+ +D GLA + + + Q G T GYL PE R P VD+++ GV+L
Sbjct: 151 AVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAK-LLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKV 179
R LA R +L+ + ++ +D GLA+ + I+ + T R ++ PE + T +
Sbjct: 163 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 222
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI +
Sbjct: 223 DVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAK-LLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKV 179
R LA R +L+ + ++ +D GLA+ + I+ + T R ++ PE + T +
Sbjct: 166 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 225
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI +
Sbjct: 226 DVWSFGVLLWEIFT 239
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-----RNMPV 175
R LA R +LL + SD GL+K L ++ +T G P +W+
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA---QTHGKWPVKWYAPECINYYKF 191
Query: 176 TVKVDVYSFGVMLLEIIS 193
+ K DV+SFGV++ E S
Sbjct: 192 SSKSDVWSFGVLMWEAFS 209
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 20/144 (13%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDC-------- 118
H N++ L G ++V ++M N S+ + L ++ +R
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 119 ---WRTRALACRILLHDYFTV-ETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMP 174
+ R LA R +L D V + SD GL+++L + T T G +P W
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT---TTGGKIPIRWTAPEA 225
Query: 175 VTVKV-----DVYSFGVMLLEIIS 193
+ + DV+SFGV++ E+++
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 84/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 26 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 83
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP +M I D
Sbjct: 84 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R ++ + FTV+ D G+ + + +T + KG LP
Sbjct: 143 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----ETDYYRKGGKGLLPVRWMS 198
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 233
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-----RNMPV 175
R LA R +LL + SD GL+K L ++ +T G P +W+
Sbjct: 141 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA---QTHGKWPVKWYAPECINYYKF 197
Query: 176 TVKVDVYSFGVMLLEIIS 193
+ K DV+SFGV++ E S
Sbjct: 198 SSKSDVWSFGVLMWEAFS 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-----RNMPV 175
R LA R +LL + SD GL+K L ++ +T G P +W+
Sbjct: 131 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA---QTHGKWPVKWYAPECINYYKF 187
Query: 176 TVKVDVYSFGVMLLEIIS 193
+ K DV+SFGV++ E S
Sbjct: 188 SSKSDVWSFGVLMWEAFS 205
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + ++ +D GLA+ +
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMKIADFGLARDIN 197
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 198 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 20/144 (13%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDC-------- 118
H N++ L G ++V ++M N S+ + L ++ +R
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 119 ---WRTRALACRILLHDYFTV-ETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMP 174
+ R LA R +L D V + SD GL+++L + T T G +P W
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT---TTGGKIPIRWTAPEA 225
Query: 175 VTVKV-----DVYSFGVMLLEIIS 193
+ + DV+SFGV++ E+++
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAK-LLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKV 179
R LA R +L+ + ++ +D GLA+ + I+ + T R ++ PE + T +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI +
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAK-LLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKV 179
R LA R +L+ + ++ +D GLA+ + I+ + T R ++ PE + T +
Sbjct: 167 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 226
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI +
Sbjct: 227 DVWSFGVLLWEIFT 240
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAK-LLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKV 179
R LA R +L+ + ++ +D GLA+ + I+ + T R ++ PE + T +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI +
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + ++ +D GLA+ +
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMKIADFGLARDIN 200
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 201 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-----RNMPV 175
R LA R +LL + SD GL+K L ++ +T G P +W+
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA---QTHGKWPVKWYAPECINYYKF 207
Query: 176 TVKVDVYSFGVMLLEIIS 193
+ K DV+SFGV++ E S
Sbjct: 208 SSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-----RNMPV 175
R LA R +LL + SD GL+K L ++ +T G P +W+
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA---QTHGKWPVKWYAPECINYYKF 207
Query: 176 TVKVDVYSFGVMLLEIIS 193
+ K DV+SFGV++ E S
Sbjct: 208 SSKSDVWSFGVLMWEAFS 225
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 29/159 (18%)
Query: 106 TWQ--QRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK 162
WQ Q MQ R LA R IL+ + ++ SD GL++ + + + ++ ++
Sbjct: 156 AWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSYVKRSQ 211
Query: 163 GYLPPEWFR-----NMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTL---------- 207
G +P +W + T + DV+SFGV+L EI++ G P+ L
Sbjct: 212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
Query: 208 EKP-------VMIAIQFVKEKPPLRPSLRIVALMLQSIL 239
E+P + +Q K++P RP ++ L+ ++
Sbjct: 272 ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAK-LLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKV 179
R LA R +L+ + ++ +D GLA+ + I+ + T R ++ PE + T +
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI +
Sbjct: 234 DVWSFGVLLWEIFT 247
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + ++ +D GLA+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + ++ +D GLA+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + ++ +D GLA+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
ILL ++ +D G AK + + T L G T Y+ PE P +D +SFG++
Sbjct: 137 ILLDKNGHIKITDFGFAKYVP-DVTYXLCG---TPDYIAPEVVSTKPYNKSIDWWSFGIL 192
Query: 188 LLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPPL 224
+ E+++ + KT EK + ++F PP
Sbjct: 193 IYEMLAGYTPFYDSNTMKTYEKILNAELRF----PPF 225
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + ++ +D GLA+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 31/133 (23%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A IL+ + +D GLA++ G + + PE T+K DV+SF
Sbjct: 306 AANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIKSDVWSF 355
Query: 185 GVMLLEIIS--------------CRCVERQGSDPKTL---EKPVMIAIQFVKEKPPLRPS 227
G++L+EI++ R +ER P+ E+ I ++ K +P RP+
Sbjct: 356 GILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 415
Query: 228 LRIVALMLQSILE 240
+ QS+L+
Sbjct: 416 FEYI----QSVLD 424
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 39/196 (19%)
Query: 34 GGSFSTVYTGVL-APGDKTN-IGVKKLD---------------KVVHVAHHKNLVCLLGY 76
G F V G L APG K + + +K L ++ H N++ L G
Sbjct: 24 AGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGV 83
Query: 77 HIEQECRLLVYKFMHNRSISSLL------YECLRPTWQQR-----MQDCIRDCWRTRALA 125
+++ +FM N ++ S L + ++ R M+ + R LA
Sbjct: 84 VTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLA 143
Query: 126 CR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-------FRNMPVTV 177
R IL++ + SD GL++ L N + T G +P W FR T
Sbjct: 144 ARNILVNSNLVCKVSDFGLSRFLEENSSDP-TYTSSLGGKIPIRWTAPEAIAFRKF--TS 200
Query: 178 KVDVYSFGVMLLEIIS 193
D +S+G+++ E++S
Sbjct: 201 ASDAWSYGIVMWEVMS 216
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + ++ +D GLA+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + ++ +D GLA+ +
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMKIADFGLARDIN 254
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 255 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 140 DLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
DLG AK L +Q + T T YL PE TV VD +SFG + E I+
Sbjct: 167 DLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 218
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 84/215 (39%), Gaps = 55/215 (25%)
Query: 35 GSFSTVYTGV----LAPGDKTNIGVKKLDKVVHVA-----------------HHKNLVCL 73
GSF VY GV + +T + +K +++ + HH +V L
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VVRL 80
Query: 74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQ-------------RMQDCIRDC-- 118
LG + + L++ + M + S L LRP + +M I D
Sbjct: 81 LGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 119 ------WRTRALACRI-LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLP----- 166
+ R LA R + + FTV+ D G+ + + +T + KG LP
Sbjct: 140 YLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY----ETDYYRKGGKGLLPVRWMS 195
Query: 167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG 201
PE ++ T DV+SFGV+L EI + QG
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 230
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 24/146 (16%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDC-------- 118
H N++ L G + + ++V ++M N S+ + L + ++ +R
Sbjct: 82 HPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS 141
Query: 119 ---WRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW----- 169
+ R LA R IL++ + SD GL+++L + T G +P W
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT---TRGGKIPIRWTAPEA 198
Query: 170 --FRNMPVTVKVDVYSFGVMLLEIIS 193
FR T DV+S+G+++ E++S
Sbjct: 199 IAFRKF--TSASDVWSYGIVMWEVVS 222
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 45/231 (19%)
Query: 9 EADPSQYENRVFGSFSHIYSLKKPCGGSFSTVYTGVLAP-GDKTN--IGVKKLD------ 59
+ DP+Q+E R H+ L++ G+F +V P D T + VKKL
Sbjct: 4 DRDPTQFEER------HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 57
Query: 60 --------KVVHVAHHKNLVCLLG--YHIEQECRLLVYKFMHNRSISSLLYE-------- 101
+++ H N+V G Y + L+ +F+ S+ L +
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI 117
Query: 102 -CLRPTWQ--QRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
L+ T Q + M+ + R LA R IL+ + V+ D GL K+L Q +
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXK 175
Query: 158 MRETKG----YLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDP 204
++E + PE +V DV+SFGV+L E+ + +E+ S P
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPP 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 140 DLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
DLG AK L +Q + T T YL PE TV VD +SFG + E I+
Sbjct: 168 DLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 219
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAK-LLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKV 179
R LA R +L+ + ++ +D GLA+ + I+ + T R ++ PE + T +
Sbjct: 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 274
Query: 180 DVYSFGVMLLEIIS 193
DV+SFGV+L EI +
Sbjct: 275 DVWSFGVLLWEIFT 288
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 90 MHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLM 148
M + + S Y+ R Q CI R LA R +L+ + + +D GLA+ +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIH-----RDLAARNVLVTENNVMRIADFGLARDIN 208
Query: 149 -INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQ--TLTGMRETKGYLPPEWFRNMPVTVKVDVY 182
A +LL ++ V+ +D G+A L Q + T G T ++ PE + K D++
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG---TPFWMAPEVIKQSAYDSKADIW 188
Query: 183 SFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPP 223
S G+ +E+ +G P + P+ + K PP
Sbjct: 189 SLGITAIELA-------RGEPPHSELHPMKVLFLIPKNNPP 222
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVML 188
V+ +D GLA + +Q Q G T GYL PE R VD+++ GV+L
Sbjct: 144 AVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V + M N S+ S L + LR M+
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 134
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GL+++L + T G + + PE
Sbjct: 135 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMS 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQ--TLTGMRETKGYLPPEWFRNMPVTVKVDVY 182
A +LL ++ V+ +D G+A L Q + T G T ++ PE + K D++
Sbjct: 152 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG---TPFWMAPEVIKQSAYDSKADIW 208
Query: 183 SFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPP 223
S G+ +E+ +G P + P+ + K PP
Sbjct: 209 SLGITAIELA-------RGEPPHSELHPMKVLFLIPKNNPP 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETK-GYLPPEWFRNMPVTVKV 179
+ LA R +L++D V+ SDLGL + + L G ++ PE ++
Sbjct: 152 KDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDS 211
Query: 180 DVYSFGVMLLEIIS 193
D++S+GV+L E+ S
Sbjct: 212 DIWSYGVVLWEVFS 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 33.9 bits (76), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPV----- 175
+ LA R +L++D V+ SDLGL + + L G LP W +
Sbjct: 169 KDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG----NSLLPIRWMAPEAIMYGKF 224
Query: 176 TVKVDVYSFGVMLLEIIS 193
++ D++S+GV+L E+ S
Sbjct: 225 SIDSDIWSYGVVLWEVFS 242
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE------------CLRPTWQQRMQDC 114
H N++ L G + + ++V + M N S+ S L + LR M+
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI-ASGMKYL 163
Query: 115 IRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFR 171
+ R LA R IL++ + SD GL+++L + T G + + PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 172 NMPVTVKVDVYSFGVMLLEIIS 193
T DV+S+G++L E++S
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLT-GMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
I L TV+ D G+A++L N T L T YL PE N P K D+++ G
Sbjct: 156 IFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGC 213
Query: 187 MLLEIISCRCVERQGS 202
+L E+ + + GS
Sbjct: 214 VLYELCTLKHAFEAGS 229
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 127 RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVT--VKVDVYSF 184
IL+ V+ SD G ++ ++ + + G R T ++PPE+F N KVD++S
Sbjct: 182 NILMDKNGRVKLSDFGESEYMV---DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238
Query: 185 GVML 188
G+ L
Sbjct: 239 GICL 242
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 45/230 (19%)
Query: 10 ADPSQYENRVFGSFSHIYSLKKPCGGSFSTVYTGVLAP-GDKTN--IGVKKLD------- 59
+DP+Q+E R H+ L++ G+F +V P D T + VKKL
Sbjct: 2 SDPTQFEER------HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 55
Query: 60 -------KVVHVAHHKNLVCLLG--YHIEQECRLLVYKFMHNRSISSLLYE--------- 101
+++ H N+V G Y + L+ +++ S+ L +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 115
Query: 102 CLRPTWQ--QRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGM 158
L+ T Q + M+ + R LA R IL+ + V+ D GL K+L Q + +
Sbjct: 116 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP--QDKEFFKV 173
Query: 159 RETKG----YLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDP 204
+E + PE +V DV+SFGV+L E+ + +E+ S P
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPP 221
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R +LL + V+ D GLAK + + +RE + PE +
Sbjct: 141 RNLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDPKTLE 208
DV+SFGV L E+++ C Q K LE
Sbjct: 199 YASDVWSFGVTLYELLT-HCDSSQSPPTKFLE 229
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R +LL + V+ D GLAK + + +RE + PE +
Sbjct: 141 RNLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDPKTLE 208
DV+SFGV L E+++ C Q K LE
Sbjct: 199 YASDVWSFGVTLYELLT-HCDSSQSPPTKFLE 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
IL++ ++ D G++ L+ + + G T+ Y+ PE + +V+ D++S G
Sbjct: 144 SNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMAPERLQGTHYSVQSDIWSMG 200
Query: 186 VMLLEIISCR 195
+ L+E+ R
Sbjct: 201 LSLVELAVGR 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 12/101 (11%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQ--TLTGMRETKGYLPPEWFRNMPVTVKVDVY 182
A +LL + V+ +D G+A L Q + T G T ++ PE + K D++
Sbjct: 148 AANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVG---TPFWMAPEVIQQSAYDSKADIW 204
Query: 183 SFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPP 223
S G+ +E+ +G P + P+ + K PP
Sbjct: 205 SLGITAIELA-------KGEPPNSDMHPMRVLFLIPKNNPP 238
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
IL++ ++ D G++ L+ + + G T+ Y+ PE + +V+ D++S G
Sbjct: 161 SNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMSPERLQGTHYSVQSDIWSMG 217
Query: 186 VMLLEIISCR 195
+ L+E+ R
Sbjct: 218 LSLVEMAVGR 227
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 45/230 (19%)
Query: 10 ADPSQYENRVFGSFSHIYSLKKPCGGSFSTVYTGVLAP-GDKTN--IGVKKLD------- 59
+DP+Q+E R H+ L++ G+F +V P D T + VKKL
Sbjct: 2 SDPTQFEER------HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 55
Query: 60 -------KVVHVAHHKNLVCLLG--YHIEQECRLLVYKFMHNRSISSLLYE--------- 101
+++ H N+V G Y + L+ +++ S+ L +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 115
Query: 102 CLRPTWQ--QRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGM 158
L+ T Q + M+ + R LA R IL+ + V+ D GL K+L Q + +
Sbjct: 116 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXKV 173
Query: 159 RETKG----YLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDP 204
+E + PE +V DV+SFGV+L E+ + +E+ S P
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPP 221
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 55 VKKLDKVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLL-----------YECL 103
V +++ + + HKN++ LLG + ++ ++ ++ L Y+
Sbjct: 75 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 134
Query: 104 R-PTWQQRMQDCI---------------RDCWRTRALACRILLHDYFTVETSDLGLAK-L 146
R P Q +D + + C A +L+ + ++ +D GLA+ +
Sbjct: 135 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 147 LMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
I+ + T R ++ PE + T + DV+SFGV++ EI +
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
RALA R +LL + V+ D GLAK + + +RE + PE +
Sbjct: 135 RALAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 192
Query: 177 VKVDVYSFGVMLLEIIS 193
DV+SFGV L E+++
Sbjct: 193 YASDVWSFGVTLYELLT 209
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
IL++ ++ D G++ L+ + + G T+ Y+ PE + +V+ D++S G
Sbjct: 196 SNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMSPERLQGTHYSVQSDIWSMG 252
Query: 186 VMLLEIISCR 195
+ L+E+ R
Sbjct: 253 LSLVEMAVGR 262
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
RALA R +LL + V+ D GLAK + + +RE + PE +
Sbjct: 136 RALAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 193
Query: 177 VKVDVYSFGVMLLEIIS 193
DV+SFGV L E+++
Sbjct: 194 YASDVWSFGVTLYELLT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 143 RDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXKVKEPGESPIFWYAPESLTESKFS 200
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 201 VASDVWSFGVVLYELFT--YIEKSKSPP 226
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 137 RDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXKVKEPGESPIFWYAPESLTESKFS 194
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 195 VASDVWSFGVVLYELFT--YIEKSKSPP 220
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 45/231 (19%)
Query: 9 EADPSQYENRVFGSFSHIYSLKKPCGGSFSTVYTGVLAP-GDKTN--IGVKKLD------ 59
+ DP+Q+E R H+ L++ G+F +V P D T + VKKL
Sbjct: 32 DRDPTQFEER------HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 85
Query: 60 --------KVVHVAHHKNLVCLLG--YHIEQECRLLVYKFMHNRSISSLLYE-------- 101
+++ H N+V G Y + L+ +++ S+ L +
Sbjct: 86 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 145
Query: 102 -CLRPTWQ--QRMQDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
L+ T Q + M+ + R LA R IL+ + V+ D GL K+L Q +
Sbjct: 146 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXK 203
Query: 158 MRETKG----YLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDP 204
++E + PE +V DV+SFGV+L E+ + +E+ S P
Sbjct: 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT--YIEKSKSPP 252
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFRNMPVTVK 178
R LA R IL++ + SD GL+++L + T G + + PE T
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 179 VDVYSFGVMLLEIIS 193
DV+S+G++L E++S
Sbjct: 231 SDVWSYGIVLWEVMS 245
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 199 VASDVWSFGVVLYELFT--YIEKSKSPP 224
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
IL++ ++ D G++ L+ + + G T+ Y+ PE + +V+ D++S G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 186 VMLLEIISCR 195
+ L+E+ R
Sbjct: 191 LSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
IL++ ++ D G++ L+ + + G T+ Y+ PE + +V+ D++S G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 186 VMLLEIISCR 195
+ L+E+ R
Sbjct: 191 LSLVEMAVGR 200
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 142 RDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXKVKEPGESPIFWYAPESLTESKFS 199
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 200 VASDVWSFGVVLYELFT--YIEKSKSPP 225
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 136 RDLATRNILVENENRVKIGDFGLTKVL--PQDKEXXKVKEPGESPIFWYAPESLTESKFS 193
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 194 VASDVWSFGVVLYELFT--YIEKSKSPP 219
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
IL++ ++ D G++ L+ + + G T+ Y+ PE + +V+ D++S G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 186 VMLLEIISCR 195
+ L+E+ R
Sbjct: 191 LSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
IL++ ++ D G++ L+ + + G T+ Y+ PE + +V+ D++S G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMANSFVG---TRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 186 VMLLEIISCR 195
+ L+E+ R
Sbjct: 191 LSLVEMAVGR 200
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 145 RDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXKVKEPGESPIFWYAPESLTESKFS 202
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 203 VASDVWSFGVVLYELFT--YIEKSKSPP 228
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 199 VASDVWSFGVVLYELFT--YIEKSKSPP 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 144 RDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXKVKEPGESPIFWYAPESLTESKFS 201
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 202 VASDVWSFGVVLYELFT--YIEKSKSPP 227
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 156 RDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 214 VASDVWSFGVVLYELFT--YIEKSKSPP 239
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 156 RDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 214 VASDVWSFGVVLYELFT--YIEKSKSPP 239
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R +LL + V+ D GLAK + + +RE + PE +
Sbjct: 158 RDLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFY 215
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDPKTLE 208
DV+SFGV L E+++ C Q K LE
Sbjct: 216 YASDVWSFGVTLYELLT-HCDSSQSPPTKFLE 246
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLP--QDKEXXKVKEPGESPIFWYAPESLTESKFS 195
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 196 VASDVWSFGVVLYELFT--YIEKSKSPP 221
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKG----YLPPEWFRNMPVT 176
R LA R IL+ + V+ D GL K+L Q + ++E + PE +
Sbjct: 139 RNLATRNILVENENRVKIGDFGLTKVLP--QDKEYYKVKEPGESPIFWYAPESLTESKFS 196
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDP 204
V DV+SFGV+L E+ + +E+ S P
Sbjct: 197 VASDVWSFGVVLYELFT--YIEKSKSPP 222
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 112 QDCIRDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEW 169
++CI R LA R ILL + D GLA+ + + + G R ++ PE
Sbjct: 187 KNCIH-----RDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPES 241
Query: 170 FRNMPVTVKVDVYSFGVMLLEIIS 193
N T + DV+S+G+ L E+ S
Sbjct: 242 IFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 53/147 (36%), Gaps = 27/147 (18%)
Query: 84 LLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACRILLHDYFTVETSDLGL 143
+L + MHNR + +Y L+P ILL ++ V SDLGL
Sbjct: 302 ILGLEHMHNRFV---VYRDLKP--------------------ANILLDEHGHVRISDLGL 338
Query: 144 AKLLMINQTQTLTGMRETKGYLPPEWF-RNMPVTVKVDVYSFGVMLLEIISCRCVERQGS 202
A + G T GY+ PE + + D +S G ML +++ RQ
Sbjct: 339 ACDFSKKKPHASVG---THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
Query: 203 DPKTLEKPVMIAIQFVKEKPPLRPSLR 229
E M V+ P LR
Sbjct: 396 TKDKHEIDRMTLTMAVELPDSFSPELR 422
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + D GLA+ + + + G R ++ PE N T +
Sbjct: 185 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 244
Query: 180 DVYSFGVMLLEIIS 193
DV+S+G+ L E+ S
Sbjct: 245 DVWSYGIFLWELFS 258
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + D GLA+ + + + G R ++ PE N T +
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 228
Query: 180 DVYSFGVMLLEIIS 193
DV+S+G+ L E+ S
Sbjct: 229 DVWSYGIFLWELFS 242
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 53/147 (36%), Gaps = 27/147 (18%)
Query: 84 LLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACRILLHDYFTVETSDLGL 143
+L + MHNR + +Y L+P ILL ++ V SDLGL
Sbjct: 301 ILGLEHMHNRFV---VYRDLKP--------------------ANILLDEHGHVRISDLGL 337
Query: 144 AKLLMINQTQTLTGMRETKGYLPPEWF-RNMPVTVKVDVYSFGVMLLEIISCRCVERQGS 202
A + G T GY+ PE + + D +S G ML +++ RQ
Sbjct: 338 ACDFSKKKPHASVG---THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 394
Query: 203 DPKTLEKPVMIAIQFVKEKPPLRPSLR 229
E M V+ P LR
Sbjct: 395 TKDKHEIDRMTLTMAVELPDSFSPELR 421
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + D GLA+ + + + G R ++ PE N T +
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 251
Query: 180 DVYSFGVMLLEIIS 193
DV+S+G+ L E+ S
Sbjct: 252 DVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKV 179
R LA R ILL + D GLA+ + + + G R ++ PE N T +
Sbjct: 187 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 246
Query: 180 DVYSFGVMLLEIIS 193
DV+S+G+ L E+ S
Sbjct: 247 DVWSYGIFLWELFS 260
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A +LL ++ V+ +D G+A L Q + T ++ PE + K D++S
Sbjct: 147 AANVLLSEHGEVKLADFGVAGQLTDTQIKR-NXFVGTPFWMAPEVIKQSAYDSKADIWSL 205
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPP 223
G+ +E+ +G P + P+ + K PP
Sbjct: 206 GITAIELA-------RGEPPHSELHPMKVLFLIPKNNPP 237
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A +LL ++ V+ +D G+A L Q + T ++ PE + K D++S
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKR-NXFVGTPFWMAPEVIKQSAYDSKADIWSL 190
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPP 223
G+ +E+ +G P + P+ + K PP
Sbjct: 191 GITAIELA-------RGEPPHSELHPMKVLFLIPKNNPP 222
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 53/147 (36%), Gaps = 27/147 (18%)
Query: 84 LLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACRILLHDYFTVETSDLGL 143
+L + MHNR + +Y L+P ILL ++ V SDLGL
Sbjct: 302 ILGLEHMHNRFV---VYRDLKP--------------------ANILLDEHGHVRISDLGL 338
Query: 144 AKLLMINQTQTLTGMRETKGYLPPEWF-RNMPVTVKVDVYSFGVMLLEIISCRCVERQGS 202
A + G T GY+ PE + + D +S G ML +++ RQ
Sbjct: 339 ACDFSKKKPHASVG---THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
Query: 203 DPKTLEKPVMIAIQFVKEKPPLRPSLR 229
E M V+ P LR
Sbjct: 396 TKDKHEIDRMTLTMAVELPDSFSPELR 422
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 53/147 (36%), Gaps = 27/147 (18%)
Query: 84 LLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALACRILLHDYFTVETSDLGL 143
+L + MHNR + +Y L+P ILL ++ V SDLGL
Sbjct: 302 ILGLEHMHNRFV---VYRDLKP--------------------ANILLDEHGHVRISDLGL 338
Query: 144 AKLLMINQTQTLTGMRETKGYLPPEWF-RNMPVTVKVDVYSFGVMLLEIISCRCVERQGS 202
A + G T GY+ PE + + D +S G ML +++ RQ
Sbjct: 339 ACDFSKKKPHASVG---THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
Query: 203 DPKTLEKPVMIAIQFVKEKPPLRPSLR 229
E M V+ P LR
Sbjct: 396 TKDKHEIDRMTLTMAVELPDSFSPELR 422
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 18/106 (16%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
IL++ ++ D G++ L+ G T+ Y+ PE + +V+ D++S G
Sbjct: 137 SNILVNSRGEIKLCDFGVSGQLIDEMANEFVG---TRSYMSPERLQGTHYSVQSDIWSMG 193
Query: 186 VMLLEIISCRCVERQGSDPKTLEKPVMIAIQF----VKEKPPLRPS 227
+ L+E+ R +P M + V E PP PS
Sbjct: 194 LSLVEMAVGR-----------YPRPPMAIFELLDYIVNEPPPKLPS 228
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 75/180 (41%), Gaps = 19/180 (10%)
Query: 46 APGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHN---------RSIS 96
+PG T +K+ + H+ H ++V LL + +V++FM R+ +
Sbjct: 67 SPGLSTE-DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA 125
Query: 97 SLLY-ECLRPTWQQRMQDCIRDCWRTRALA------CRILLHDYFTVETSDLGLAKLLMI 149
+Y E + + +++ + +R C + C +L + G + +
Sbjct: 126 GFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 185
Query: 150 NQTQTLTGMR-ETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLE 208
++ + G R T ++ PE + P VDV+ GV+L ++S C+ G+ + E
Sbjct: 186 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG-CLPFYGTKERLFE 244
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
+T + + ++ PE F + K DV+S+G++L E+I+ R
Sbjct: 161 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 201
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
+T + + ++ PE F + K DV+S+G++L E+I+ R
Sbjct: 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 200
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFRNMPVTVK 178
R LA R IL++ + SD G++++L + T G + + PE T
Sbjct: 134 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 193
Query: 179 VDVYSFGVMLLEIIS 193
DV+S+G+++ E++S
Sbjct: 194 SDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFRNMPVTVK 178
R LA R IL++ + SD G++++L + T G + + PE T
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 199
Query: 179 VDVYSFGVMLLEIIS 193
DV+S+G+++ E++S
Sbjct: 200 SDVWSYGIVMWEVMS 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFRNMPVTVK 178
R LA R IL++ + SD G++++L + T G + + PE T
Sbjct: 155 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 214
Query: 179 VDVYSFGVMLLEIIS 193
DV+S+G+++ E++S
Sbjct: 215 SDVWSYGIVMWEVMS 229
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
A +LL + V+ +D G+A L Q + T ++ PE + K D++S
Sbjct: 144 AANVLLSEQGDVKLADFGVAGQLTDTQIKR-NXFVGTPFWMAPEVIKQSAYDFKADIWSL 202
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPP 223
G+ +E+ +G P + P+ + K PP
Sbjct: 203 GITAIELA-------KGEPPNSDLHPMRVLFLIPKNSPP 234
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQT--QTLTGMRETKGYLPPEWFRNMPVTVKVDVYS 183
+ L V+ D GLA++L + + +T G T Y+ PE M K D++S
Sbjct: 145 ANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVG---TPYYMSPEQMNRMSYNEKSDIWS 201
Query: 184 FGVMLLEI 191
G +L E+
Sbjct: 202 LGCLLYEL 209
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 21 GSFSHIYS-LKKPCGGSFSTVYTGVL----APGDKTNIGVKKLDKVVHVAHHKNLVCLLG 75
G+FS + + + G F+ V +PG T +K+ + H+ H ++V LL
Sbjct: 35 GAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLKHPHIVELLE 93
Query: 76 YHIEQECRLLVYKFMHN---------RSISSLLY-ECLRPTWQQRMQDCIRDCWRTRAL- 124
+ +V++FM R+ + +Y E + + +++ + +R C +
Sbjct: 94 TYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIH 153
Query: 125 ----ACRILL---HDYFTVETSDLGLAKLLMINQTQTLTGMR-ETKGYLPPEWFRNMPVT 176
+LL + V+ D G+A + + ++ + G R T ++ PE + P
Sbjct: 154 RDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHFMAPEVVKREPYG 211
Query: 177 VKVDVYSFGVMLLEIISCRCVERQGSDPKTLE 208
VDV+ GV+L ++S C+ G+ + E
Sbjct: 212 KPVDVWGCGVILFILLSG-CLPFYGTKERLFE 242
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 9 EADPSQYENRVF--------GSFSHI----YSLKKPCGGSFSTVYTGVLAPGDKTNIGVK 56
E DP+ +E R G F + Y + G V + G +K
Sbjct: 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK 71
Query: 57 KLDKVVHVAHHKNLVCLLGYHIEQECR--LLVYKFMHNRSISSLLYECLRP-TWQQRMQD 113
K +++ +H+N+V G E L+ +F+ + S+ L + +Q+++
Sbjct: 72 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 131
Query: 114 CIRDC----------WRTRALACR-ILLHDYFTVETSDLGLAKLLMIN-QTQTLTGMRET 161
++ C + R LA R +L+ V+ D GL K + + + T+ R++
Sbjct: 132 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 191
Query: 162 KGY-LPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
+ PE + DV+SFGV L E+++
Sbjct: 192 PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 75/180 (41%), Gaps = 19/180 (10%)
Query: 46 APGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHN---------RSIS 96
+PG T +K+ + H+ H ++V LL + +V++FM R+ +
Sbjct: 65 SPGLSTE-DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA 123
Query: 97 SLLY-ECLRPTWQQRMQDCIRDCWRTRALA------CRILLHDYFTVETSDLGLAKLLMI 149
+Y E + + +++ + +R C + C +L + G + +
Sbjct: 124 GFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183
Query: 150 NQTQTLTGMR-ETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLE 208
++ + G R T ++ PE + P VDV+ GV+L ++S C+ G+ + E
Sbjct: 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG-CLPFYGTKERLFE 242
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+ L V+ D GLA++L + T T Y+ PE M K D++S G
Sbjct: 145 ANVFLDGKQNVKLGDFGLARILN-HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 186 VMLLEI 191
+L E+
Sbjct: 204 CLLYEL 209
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFRNMPVTVK 178
R LA R L+ V+ D G+++ + + G M + ++PPE T +
Sbjct: 182 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-WMPPESILYRKFTTE 240
Query: 179 VDVYSFGVMLLEI----------------ISCRCVERQGSDPKTLEKPVMIAIQFV-KEK 221
DV+SFGV+L EI I C R+ P+ V ++ + +
Sbjct: 241 SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQRE 300
Query: 222 PPLRPSLRIVALMLQSILEVP 242
P R S++ V LQ++ + P
Sbjct: 301 PQQRHSIKDVHARLQALAQAP 321
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 16/95 (16%)
Query: 154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVE----RQGSDPKTLEK 209
T G TK Y+ PE + KVD++S G++L E++ + R +D + L+
Sbjct: 232 THXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKF 291
Query: 210 PVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP 244
P++ ++ +E +M+Q +L PSP
Sbjct: 292 PLLFTQKYPQEH-----------MMVQDMLS-PSP 314
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFRNMPVTVK 178
R LA R L+ V+ D G+++ + + G M + ++PPE T +
Sbjct: 153 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-WMPPESILYRKFTTE 211
Query: 179 VDVYSFGVMLLEI----------------ISCRCVERQGSDPKTLEKPVMIAIQFV-KEK 221
DV+SFGV+L EI I C R+ P+ V ++ + +
Sbjct: 212 SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQRE 271
Query: 222 PPLRPSLRIVALMLQSILEVP 242
P R S++ V LQ++ + P
Sbjct: 272 PQQRHSIKDVHARLQALAQAP 292
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 156 TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEII 192
TG TK Y+ PE + KVD++S G++L E++
Sbjct: 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG--MRETKGYLPPEWFRNMPVTVK 178
R LA R L+ V+ D G+++ + + G M + ++PPE T +
Sbjct: 159 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-WMPPESILYRKFTTE 217
Query: 179 VDVYSFGVMLLEI----------------ISCRCVERQGSDPKTLEKPVMIAIQFV-KEK 221
DV+SFGV+L EI I C R+ P+ V ++ + +
Sbjct: 218 SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQRE 277
Query: 222 PPLRPSLRIVALMLQSILEVP 242
P R S++ V LQ++ + P
Sbjct: 278 PQQRHSIKDVHARLQALAQAP 298
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 87/233 (37%), Gaps = 46/233 (19%)
Query: 13 SQYENRVFGSFSHIYS-LKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------ 59
S EN F Y L+K G++ VY + G + +LD
Sbjct: 9 SGRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR 68
Query: 60 --KVVHVAHHKNLVCLLGYHIEQECRLLVYKFM---------------HNRSISSLLYEC 102
++ HH N+V L+ + C LV++FM + I LY+
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQL 128
Query: 103 LRPTWQQRMQDCIRDCWRTRAL-----ACRILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
LR + C + R L +L++ ++ +D GLA+ I ++ T
Sbjct: 129 LR---------GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTH 178
Query: 158 MRETKGYLPPE-WFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEK 209
T Y P+ + + VD++S G + E+I+ + + +D L K
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK 231
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 78/213 (36%), Gaps = 45/213 (21%)
Query: 27 YSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK----------------VVHVAHHKNL 70
Y KP G + N+ VKKL + ++ +HKN+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 71 VCLLGYHIEQE-------------------CRLLVYKFMHNRSISSLLYECLRPTWQQRM 111
+ LL Q+ C+++ + H R +S LLY+ L
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER-MSYLLYQMLCGIKHLHS 144
Query: 112 QDCIRDCWRTRALA-CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF 170
I R L I++ T++ D GLA+ N +T T+ Y PE
Sbjct: 145 AGIIH-----RDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRYYRAPEVI 197
Query: 171 RNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD 203
M VD++S G ++ E++ CV QG+D
Sbjct: 198 LGMGYAANVDIWSVGCIMGELVKG-CVIFQGTD 229
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 128 ILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
++L ++ +D G+ K + + T+ G T Y+ PE P VD ++FG
Sbjct: 473 VMLDSEGHIKIADFGMCKENIWDGVTTKXFCG---TPDYIAPEIIAYQPYGKSVDWWAFG 529
Query: 186 VMLLEIISCRCVERQGSDPKTLEKPVM 212
V+L E+++ + +G D L + +M
Sbjct: 530 VLLYEMLAGQ-APFEGEDEDELFQSIM 555
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 127 RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRE---TKGYLPPEWFRNMPVTVKVDVYS 183
++L ++ +D G+ K M++ T RE T Y+ PE P VD ++
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDGVTT----REFCGTPDYIAPEIIAYQPYGKSVDWWA 205
Query: 184 FGVMLLEIISCRCVERQGSDPKTLEKPVM 212
+GV+L E+++ + G D L + +M
Sbjct: 206 YGVLLYEMLAGQP-PFDGEDEDELFQSIM 233
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMIN-QTQTLTGMRETKGY-LPPEWFRNMPVTVK 178
R LA R +L+ V+ D GL K + + + T+ R++ + PE +
Sbjct: 138 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA 197
Query: 179 VDVYSFGVMLLEIIS 193
DV+SFGV L E+++
Sbjct: 198 SDVWSFGVTLHELLT 212
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 82/219 (37%), Gaps = 46/219 (21%)
Query: 13 SQYENRVFGSFSHIYS-LKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------ 59
S EN F Y L+K G++ VY + G + +LD
Sbjct: 9 SGRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR 68
Query: 60 --KVVHVAHHKNLVCLLGYHIEQECRLLVYKFM---------------HNRSISSLLYEC 102
++ HH N+V L+ + C LV++FM + I LY+
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQL 128
Query: 103 LRPTWQQRMQDCIRDCWRTRAL-----ACRILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
LR + C + R L +L++ ++ +D GLA+ I ++ T
Sbjct: 129 LR---------GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTH 178
Query: 158 MRETKGYLPPE-WFRNMPVTVKVDVYSFGVMLLEIISCR 195
T Y P+ + + VD++S G + E+I+ +
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 43/221 (19%)
Query: 11 DPSQYENRVFGSF---SHIYSLKKPCGGSFSTVYTGVLAP-GDKTNIGV----------- 55
DPS+ N+V + + LK G F TV+ GV P G+ I V
Sbjct: 15 DPSEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR 74
Query: 56 ----KKLDKVVHVA--HHKNLVCLLGYHIEQECRLLVYKFM-------HNRSISSLLYEC 102
D ++ + H ++V LLG +L V +++ H R L
Sbjct: 75 QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQ 133
Query: 103 LRPTWQQRMQDCI----RDCWRTRALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTG 157
L W ++ + R LA R +LL V+ +D G+A LL + Q L
Sbjct: 134 LLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 193
Query: 158 MRETKGYLPPEWFRNMPV-----TVKVDVYSFGVMLLEIIS 193
+T P +W + T + DV+S+GV + E+++
Sbjct: 194 EAKT----PIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 30.8 bits (68), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQ--TQTLTGMRETKGYLPPEWFRNMPVTVKVDVYS 183
+ L V+ D GLA++L ++ + G T Y+ PE M K D++S
Sbjct: 145 ANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVG---TPYYMSPEQMNRMSYNEKSDIWS 201
Query: 184 FGVMLLEI 191
G +L E+
Sbjct: 202 LGCLLYEL 209
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 30.8 bits (68), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 3/130 (2%)
Query: 58 LDKVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD 117
LD + H L+ L E R++ F R S L+++ L +
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 118 CWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTV 177
+ L L D + SD GL+K M + L+ T GY+ PE P +
Sbjct: 141 DLKPENLLYYSLDEDS-KIMISDFGLSK--MEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 178 KVDVYSFGVM 187
VD +S GV+
Sbjct: 198 AVDCWSIGVI 207
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 30.8 bits (68), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 39/181 (21%)
Query: 67 HKNLVCLL-GYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALA 125
H N+V LL ++ E +L+ +F ++ +++ E RP + ++Q + + L
Sbjct: 93 HPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCK-----QTLD 146
Query: 126 CRILLHD-------------YFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-- 170
LHD FT++ D+ LA ++ T T R P W
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLD-GDIKLADF-GVSAKNTRTIQRRDSFIGTPYWMAP 204
Query: 171 --------RNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKP 222
++ P K DV+S G+ L+E+ P P+ + ++ K +P
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP-------PHHELNPMRVLLKIAKSEP 257
Query: 223 P 223
P
Sbjct: 258 P 258
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 30.8 bits (68), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRET----KGYLPPEWFRNM-PVTVKV 179
A ILL + +V+ +D G++ L T +R+T ++ PE + K
Sbjct: 144 AGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA 203
Query: 180 DVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPP 223
D++SFG+ +E+ + G+ P P+ + + ++ PP
Sbjct: 204 DIWSFGITAIELAT-------GAAPYHKYPPMKVLMLTLQNDPP 240
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 40/194 (20%)
Query: 35 GSFSTVYTGVLAP-GDKTNI--GVKKLDKVVHVAHHKNL--------------VC-LLGY 76
G+F TVY G+ P G+K I +K+L + +K + VC LLG
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 77 HIEQECRLLV----------YKFMHNRSISS--LLYECLRPTWQQRMQDCIRDCWRTRAL 124
+ +L+ Y H +I S LL C++ + R R A
Sbjct: 93 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA- 151
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPV-----TVKV 179
A +L+ V+ +D GLAKLL + + G +P +W + T +
Sbjct: 152 ARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 180 DVYSFGVMLLEIIS 193
DV+S+GV + E+++
Sbjct: 208 DVWSYGVTVWELMT 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQ---TQTLTGMRETKGYLPPEWFRNMPVTV 177
R LA R +LL + + SD GL+K L + T G K Y P E +
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP-ECINFRKFSS 518
Query: 178 KVDVYSFGVMLLEIIS 193
+ DV+S+GV + E +S
Sbjct: 519 RSDVWSYGVTMWEALS 534
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 40/194 (20%)
Query: 35 GSFSTVYTGVLAP-GDKTNI--GVKKLDKVVHVAHHKNL--------------VC-LLGY 76
G+F TVY G+ P G+K I +K+L + +K + VC LLG
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 77 HIEQECRLLV----------YKFMHNRSISS--LLYECLRPTWQQRMQDCIRDCWRTRAL 124
+ +L+ Y H +I S LL C++ + R R A
Sbjct: 86 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLA- 144
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPV-----TVKV 179
A +L+ V+ +D GLAKLL + + G +P +W + T +
Sbjct: 145 ARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 180 DVYSFGVMLLEIIS 193
DV+S+GV + E+++
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF-----RNMPV 175
R LA R +LL + + SD GL+K L + + + G P +W+
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA---RSAGKWPLKWYAPECINFRKF 190
Query: 176 TVKVDVYSFGVMLLEIIS 193
+ + DV+S+GV + E +S
Sbjct: 191 SSRSDVWSYGVTMWEALS 208
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 38/181 (20%)
Query: 67 HKNLVCLL-GYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALA 125
H N+V LL ++ E +L+ +F ++ +++ E RP + ++Q + + L
Sbjct: 66 HPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCK-----QTLD 119
Query: 126 CRILLHD-------------YFTVETSDLGLAKL-LMINQTQTLTGMRE----TKGYLPP 167
LHD FT++ D+ LA + T+T R+ T ++ P
Sbjct: 120 ALNYLHDNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 168 EWF-----RNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKP 222
E ++ P K DV+S G+ L+E+ P P+ + ++ K +P
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP-------PHHELNPMRVLLKIAKSEP 231
Query: 223 P 223
P
Sbjct: 232 P 232
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
ILL ++ +D G+ K M+ +T T Y+ PE VD +SFGV+
Sbjct: 149 ILLDKDGHIKIADFGMCKENMLGDAKT-NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVL 207
Query: 188 LLEII 192
L E++
Sbjct: 208 LYEML 212
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 164 YLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
++PPE T + DV+SFGV+L EI +
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 125 ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRET----KGYLPPEWFRNM-PVTVKV 179
A ILL + +V+ +D G++ L T +R+T ++ PE + K
Sbjct: 149 AGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA 208
Query: 180 DVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKEKPP 223
D++SFG+ +E+ + G+ P P+ + + ++ PP
Sbjct: 209 DIWSFGITAIELAT-------GAAPYHKYPPMKVLMLTLQNDPP 245
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 3/130 (2%)
Query: 58 LDKVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD 117
LD + H L+ L E R++ F R S L+++ L +
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 118 CWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTV 177
+ L L D + SD GL+K M + L+ T GY+ PE P +
Sbjct: 141 DLKPENLLYYSLDEDS-KIMISDFGLSK--MEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 178 KVDVYSFGVM 187
VD +S GV+
Sbjct: 198 AVDCWSIGVI 207
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 127 RILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSF 184
++L ++ +D G+ K + + T+ G T Y+ PE P VD ++F
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG---TPDYIAPEIIAYQPYGKSVDWWAF 207
Query: 185 GVMLLEIISCRCVERQGSDPKTLEKPVM 212
GV+L E+++ + +G D L + +M
Sbjct: 208 GVLLYEMLAGQA-PFEGEDEDELFQSIM 234
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
ILL ++ +D G+ K M+ +T T Y+ PE VD +SFGV+
Sbjct: 150 ILLDKDGHIKIADFGMCKENMLGDAKT-NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVL 208
Query: 188 LLEII 192
L E++
Sbjct: 209 LYEML 213
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
I L D V+ D GL L + +T + + T Y+ PE + +VD+Y+ G++
Sbjct: 167 IFLVDTKQVKIGDFGLVTSLKNDGKRTRS--KGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 188 LLEII 192
L E++
Sbjct: 225 LAELL 229
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 128 ILLHDYFTVETSDLGLAK--LLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+LL ++ +D G+ K L + T T G T Y+ PE R VD ++ G
Sbjct: 184 VLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG---TPNYIAPEILRGEDYGFSVDWWALG 240
Query: 186 VMLLEIISCRC 196
V++ E+++ R
Sbjct: 241 VLMFEMMAGRS 251
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPV----- 175
R LA R +LL V+ +D G+A LL + Q L +T P +W +
Sbjct: 139 RNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT----PIKWMALESIHFGKY 194
Query: 176 TVKVDVYSFGVMLLEIIS 193
T + DV+S+GV + E+++
Sbjct: 195 THQSDVWSYGVTVWELMT 212
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQT-LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE + D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGC 222
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 223 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 3/130 (2%)
Query: 58 LDKVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD 117
LD + H L+ L E R++ F R S L+++ L +
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 118 CWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTV 177
+ L L D + SD GL+K M + L+ T GY+ PE P +
Sbjct: 141 DLKPENLLYYSLDEDS-KIMISDFGLSK--MEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 178 KVDVYSFGVM 187
VD +S GV+
Sbjct: 198 AVDCWSIGVI 207
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 127 RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL +V+ +D G + Q++ T M T ++ PE KVD++S G+
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 187 MLLEIISCRCVERQGSDPKTLEKPV 211
M +E+I +G P E P+
Sbjct: 205 MAIEMI-------EGEPPYLNENPL 222
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 127 RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL +V+ +D G + Q++ T M T ++ PE KVD++S G+
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 187 MLLEIISCRCVERQGSDPKTLEKPV 211
M +E+I +G P E P+
Sbjct: 206 MAIEMI-------EGEPPYLNENPL 223
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-------FRNM 173
R +A R +L+ V+ D GL++ + + T + +KG LP +W FR
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 174 PVTVKVDVYSFGVMLLEII 192
T DV+ FGV + EI+
Sbjct: 190 --TSASDVWMFGVCMWEIL 206
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 3/130 (2%)
Query: 58 LDKVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRD 117
LD + H L+ L E R++ F R S L+++ L +
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 118 CWRTRALACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTV 177
+ L L D + SD GL+K M + L+ T GY+ PE P +
Sbjct: 141 DLKPENLLYYSLDEDS-KIMISDFGLSK--MEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 178 KVDVYSFGVM 187
VD +S GV+
Sbjct: 198 AVDCWSIGVI 207
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 22/119 (18%)
Query: 128 ILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+ L+D V+ D GLA + + + +TL G T Y+ PE + +VD++S G
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKTLCG---TPNYIAPEVLCKKGHSFEVDIWSLG 229
Query: 186 VMLLEII--------SC------RCVERQGSDPKTLEKPVMIAI--QFVKEKPPLRPSL 228
+L ++ SC R + + S P+ + PV A+ + + P LRPS+
Sbjct: 230 CILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHIN-PVASALIRRMLHADPTLRPSV 287
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 18/119 (15%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEXIEGRXHDEKVDLWSLGVL 200
Query: 188 LLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKEKPPLRPSLRIV 231
E + + + +T ++ + F +K P RP LR V
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREV 259
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 19/182 (10%)
Query: 60 KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCW 119
K++ V H +N + L+ H++Q+ + KFM +++ + ++ Q +Q + C
Sbjct: 69 KLLDVIHTENKLYLVFEHVDQDLK----KFMDASALTGIPLPLIKSYLFQLLQ-GLAFCH 123
Query: 120 RTRAL-----ACRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRN-M 173
R L +L++ ++ +D GLA+ + +T T Y PE
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCK 182
Query: 174 PVTVKVDVYSFGVMLLEIISCRCVERQGSDP-------KTLEKPVMIAIQFVKEKPPLRP 226
+ VD++S G + E+++ R + S+ +TL P + V P +P
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 227 SL 228
S
Sbjct: 243 SF 244
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 139 SDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
SD GL+K M + ++ T GY+ PE P + VD +S GV+
Sbjct: 165 SDFGLSK--MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/244 (18%), Positives = 93/244 (38%), Gaps = 41/244 (16%)
Query: 21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQ 80
G+F +Y K G+ + ++ + +++ ++ H +V LLG +
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE-ILATCDHPYIVKLLGAYYHD 80
Query: 81 ECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRT-----------RAL-ACRI 128
++ +F ++ +++ E R + ++Q R R L A +
Sbjct: 81 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNV 140
Query: 129 LLHDYFTVETSDLGLA--KLLMINQTQTLTGMRETKGYLPPE-----WFRNMPVTVKVDV 181
L+ + +D G++ L + + + G T ++ PE ++ P K D+
Sbjct: 141 LMTLEGDIRLADFGVSAKNLKTLQKRDSFIG---TPYWMAPEVVMCETMKDTPYDYKADI 197
Query: 182 YSFGVMLLEIISCRCVERQ-----------GSDPKTLEKPVMIAIQF-------VKEKPP 223
+S G+ L+E+ + SDP TL P +++F + + P
Sbjct: 198 WSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPE 257
Query: 224 LRPS 227
RPS
Sbjct: 258 TRPS 261
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 139 SDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+D GL+K+ T G T GY+ PE P + VD +S GV+
Sbjct: 151 TDFGLSKMEQNGIMSTACG---TPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/244 (18%), Positives = 93/244 (38%), Gaps = 41/244 (16%)
Query: 21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDKVVHVAHHKNLVCLLGYHIEQ 80
G+F +Y K G+ + ++ + +++ ++ H +V LLG +
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE-ILATCDHPYIVKLLGAYYHD 88
Query: 81 ECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRT-----------RAL-ACRI 128
++ +F ++ +++ E R + ++Q R R L A +
Sbjct: 89 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNV 148
Query: 129 LLHDYFTVETSDLGLA--KLLMINQTQTLTGMRETKGYLPPE-----WFRNMPVTVKVDV 181
L+ + +D G++ L + + + G T ++ PE ++ P K D+
Sbjct: 149 LMTLEGDIRLADFGVSAKNLKTLQKRDSFIG---TPYWMAPEVVMCETMKDTPYDYKADI 205
Query: 182 YSFGVMLLEIISCRCVERQ-----------GSDPKTLEKPVMIAIQF-------VKEKPP 223
+S G+ L+E+ + SDP TL P +++F + + P
Sbjct: 206 WSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPE 265
Query: 224 LRPS 227
RPS
Sbjct: 266 TRPS 269
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFR--NMPVTVKVDVYSFG 185
ILL V +D GL+K + ++T+ T Y+ P+ R + VD +S G
Sbjct: 190 ILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249
Query: 186 VMLLEIISCRCVERQGSDPKTLE----KPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV 241
V++ E+++ G+ P T++ I+ + +K +PP + +A L L +
Sbjct: 250 VLMYELLT-------GASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLM 302
Query: 242 PSP 244
P
Sbjct: 303 KDP 305
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-------FRNM 173
R +A R +L+ V+ D GL++ + + T + +KG LP +W FR
Sbjct: 138 RDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 174 PVTVKVDVYSFGVMLLEII 192
T DV+ FGV + EI+
Sbjct: 193 --TSASDVWMFGVCMWEIL 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 25/130 (19%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL+G T YLPPE KVD++S GV+
Sbjct: 140 LLLGSAGELKIADFGWSCHAPSSRRTTLSG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 196
Query: 188 LLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKEKPPLRPSLRIVA 232
E + + + +T ++ + F +K P RP
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP------ 250
Query: 233 LMLQSILEVP 242
ML+ +LE P
Sbjct: 251 -MLREVLEHP 259
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 139 SDLGLAKLLM--INQTQTLTGMR-ETKGYLPPEWF-----RN-MPVTVKVDVYSFGVMLL 189
+DLGLA + N+ R TK Y+PPE RN + D+YSFG++L
Sbjct: 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW 243
Query: 190 EIISCRCV 197
E ++ RCV
Sbjct: 244 E-VARRCV 250
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-------FRNM 173
R +A R +L+ V+ D GL++ + + T + +KG LP +W FR
Sbjct: 137 RDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 174 PVTVKVDVYSFGVMLLEII 192
T DV+ FGV + EI+
Sbjct: 192 --TSASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-------FRNM 173
R +A R +L+ V+ D GL++ + + T + +KG LP +W FR
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 174 PVTVKVDVYSFGVMLLEII 192
T DV+ FGV + EI+
Sbjct: 187 --TSASDVWMFGVCMWEIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-------FRNM 173
R +A R +L+ V+ D GL++ + + T + +KG LP +W FR
Sbjct: 140 RDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 174 PVTVKVDVYSFGVMLLEII 192
T DV+ FGV + EI+
Sbjct: 195 --TSASDVWMFGVCMWEIL 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-------FRNM 173
R +A R +L+ V+ D GL++ + + T + +KG LP +W FR
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 174 PVTVKVDVYSFGVMLLEII 192
T DV+ FGV + EI+
Sbjct: 190 --TSASDVWMFGVCMWEIL 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 94/262 (35%), Gaps = 59/262 (22%)
Query: 27 YSLKKPCG-GSFSTVYTG------------VLAPGDKTNIGVK-KLDKVVHVA---HHKN 69
+ + +P G G F VY VL GV+ +L + V + H N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 70 LVCLLGYH---------IEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWR 120
++ L GY +E R VYK + S E T+ + + + C
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQK---LSKFDEQRTATYITELANALSYCHS 131
Query: 121 TRALACRI-----LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPV 175
R + I LL ++ +D G + ++ TL G T YLPPE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRMH 188
Query: 176 TVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKE 220
KVD++S GV+ E + + + +T ++ + F +K
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 248
Query: 221 KPPLRPSLRIVALMLQSILEVP 242
P RP ML+ +LE P
Sbjct: 249 NPSQRP-------MLREVLEHP 263
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-------FRNM 173
R +A R +L+ V+ D GL++ + + T + +KG LP +W FR
Sbjct: 163 RDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 174 PVTVKVDVYSFGVMLLEII 192
T DV+ FGV + EI+
Sbjct: 218 --TSASDVWMFGVCMWEIL 234
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 25/130 (19%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 140 LLLGSAGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 196
Query: 188 LLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKEKPPLRPSLRIVA 232
E + + + +T ++ + F +K P RP
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP------ 250
Query: 233 LMLQSILEVP 242
ML+ +LE P
Sbjct: 251 -MLREVLEHP 259
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-------FRNM 173
R +A R +L+ V+ D GL++ + + T + +KG LP +W FR
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 174 PVTVKVDVYSFGVMLLEII 192
T DV+ FGV + EI+
Sbjct: 190 --TSASDVWMFGVCMWEIL 206
>pdb|1ABY|A Chain A, Cyanomet Rhb1.1 (Recombinant Hemoglobin)
pdb|1ABW|A Chain A, Deoxy Rhb1.1 (Recombinant Hemoglobin)
pdb|1C7C|A Chain A, Deoxy Rhb1.1 (Recombinant Hemoglobin)
pdb|1O1P|A Chain A, Deoxy Hemoglobin (A-Gly-C:v1m; B,D:v1m,C93a,N108k)
Length = 283
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 12/58 (20%)
Query: 1 SGCLILNLEAD-PSQYENRVFGSFSHIYSLKKPCGGSFSTV----YTGVLAPGDKTNI 53
S CL++ L A P+++ V S + S STV Y GVL+P DKTN+
Sbjct: 102 SHCLLVTLAAHLPAEFTPAVHASLDKFLA-------SVSTVLTSKYRGVLSPADKTNV 152
>pdb|1O1L|A Chain A, Deoxy Hemoglobin (A-Gly-C:v1m,L29w,H58q; B,D:v1m)
Length = 283
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 12/58 (20%)
Query: 1 SGCLILNLEAD-PSQYENRVFGSFSHIYSLKKPCGGSFSTV----YTGVLAPGDKTNI 53
S CL++ L A P+++ V S + S STV Y GVL+P DKTN+
Sbjct: 102 SHCLLVTLAAHLPAEFTPAVHASLDKFLA-------SVSTVLTSKYRGVLSPADKTNV 152
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 127 RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL +V+ +D G + Q++ + M T ++ PE KVD++S G+
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 187 MLLEIISCRCVERQGSDPKTLEKPV 211
M +E+I +G P E P+
Sbjct: 205 MAIEMI-------EGEPPYLNENPL 222
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLT--GMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
ILL + ++ +D GL+K + ++ + + G E Y+ PE + D +S+G
Sbjct: 161 ILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVE---YMAPEVVNRQGHSHSADWWSYG 217
Query: 186 VMLLEIISCRCVERQGSDPK 205
V++ E+++ + QG D K
Sbjct: 218 VLMFEMLTG-SLPFQGKDRK 236
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 122 RALACR-ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEW-------FRNM 173
R +A R +L+ V+ D GL++ + + T + +KG LP +W FR
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 174 PVTVKVDVYSFGVMLLEII 192
T DV+ FGV + EI+
Sbjct: 570 --TSASDVWMFGVCMWEIL 586
>pdb|1O1J|A Chain A, Deoxy Hemoglobin (a-gly-c:v1m,l29f,h58q; B,d:v1m,l106w)
Length = 283
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 12/58 (20%)
Query: 1 SGCLILNLEAD-PSQYENRVFGSFSHIYSLKKPCGGSFSTV----YTGVLAPGDKTNI 53
S CL++ L A P+++ V S + S STV Y GVL+P DKTN+
Sbjct: 102 SHCLLVTLAAHLPAEFTPAVHASLDKFLA-------SVSTVLTSKYRGVLSPADKTNV 152
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 127 RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL +V+ +D G + Q++ + M T ++ PE KVD++S G+
Sbjct: 147 NILLGMDGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 187 MLLEIISCRCVERQGSDPKTLEKPV 211
M +E+I +G P E P+
Sbjct: 206 MAIEMI-------EGEPPYLNENPL 223
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 127 RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL +V+ +D G + Q++ + M T ++ PE KVD++S G+
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKR-SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 187 MLLEIISCRCVERQGSDPKTLEKPV 211
M +E+I +G P E P+
Sbjct: 205 MAIEMI-------EGEPPYLNENPL 222
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 136 VETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS 193
V+ DLGL + ++T + T Y+ PE K D++S G +L E+ +
Sbjct: 175 VKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 136 VETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
++ +D G AK + +T TL G E YL PE + VD ++ GV++ E+ +
Sbjct: 166 IQVTDFGFAKRVK-GRTWTLCGTPE---YLAPEIILSKGYNKAVDWWALGVLIYEMAA-- 219
Query: 196 CVERQGSDPKTLEKPVMIAIQFVKEK 221
G P ++P+ I + V K
Sbjct: 220 -----GYPPFFADQPIQIYEKIVSGK 240
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKE 220
T ++ PE +VD++S G+M++E++ G P + PV A++ +++
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD-------GEPPYFSDSPVQ-AMKRLRD 255
Query: 221 KPPLRPSLR 229
PP P L+
Sbjct: 256 SPP--PKLK 262
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQT-LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 221 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 136 VETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
++ +D G AK + +T TL G E YL PE + VD ++ GV++ E+ +
Sbjct: 181 IQVTDFGFAKRVK-GRTWTLCGTPE---YLAPEIILSKGYNKAVDWWALGVLIYEMAA-- 234
Query: 196 CVERQGSDPKTLEKPVMIAIQFVKEK 221
G P ++P+ I + V K
Sbjct: 235 -----GYPPFFADQPIQIYEKIVSGK 255
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 25/130 (19%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 188 LLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKEKPPLRPSLRIVA 232
E + + + +T ++ + F +K P RP
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP------ 249
Query: 233 LMLQSILEVP 242
ML+ +LE P
Sbjct: 250 -MLREVLEHP 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 25/130 (19%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 188 LLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKEKPPLRPSLRIVA 232
E + + + +T ++ + F +K P RP
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP------ 254
Query: 233 LMLQSILEVP 242
ML+ +LE P
Sbjct: 255 -MLREVLEHP 263
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 25/130 (19%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 188 LLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKEKPPLRPSLRIVA 232
E + + + +T ++ + F +K P RP
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP------ 252
Query: 233 LMLQSILEVP 242
ML+ +LE P
Sbjct: 253 -MLREVLEHP 261
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 165 LLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 221
Query: 188 LLEII 192
E +
Sbjct: 222 CYEFL 226
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 25/130 (19%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 143 LLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 188 LLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKEKPPLRPSLRIVA 232
E + + + +T ++ + F +K P RP
Sbjct: 200 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP------ 253
Query: 233 LMLQSILEVP 242
ML+ +LE P
Sbjct: 254 -MLREVLEHP 262
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 156 LLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 212
Query: 188 LLEII 192
E +
Sbjct: 213 CYEFL 217
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQT-LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 223
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 224 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 25/130 (19%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 136 LLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 192
Query: 188 LLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKEKPPLRPSLRIVA 232
E + + + +T ++ + F +K P RP
Sbjct: 193 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP------ 246
Query: 233 LMLQSILEVP 242
ML+ +LE P
Sbjct: 247 -MLREVLEHP 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 25/130 (19%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 138 LLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 194
Query: 188 LLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKEKPPLRPSLRIVA 232
E + + + +T ++ + F +K P RP
Sbjct: 195 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP------ 248
Query: 233 LMLQSILEVP 242
ML+ +LE P
Sbjct: 249 -MLREVLEHP 257
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 126 CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
I L D V+ D GL L + + + + T Y+ PE + +VD+Y+ G
Sbjct: 151 SNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KGTLRYMSPEQISSQDYGKEVDLYALG 208
Query: 186 VMLLEII 192
++L E++
Sbjct: 209 LILAELL 215
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 143 LLLGSNGELKIADFGWSVHAPSSRRDTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 188 LLEII 192
E +
Sbjct: 200 CYEFL 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 25/130 (19%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 188 LLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKEKPPLRPSLRIVA 232
E + + + +T ++ + F +K P RP
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP------ 252
Query: 233 LMLQSILEVP 242
ML+ +LE P
Sbjct: 253 -MLREVLEHP 261
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGC 222
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ K + + F
Sbjct: 223 IIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF 253
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQT-LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 219
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 220 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 168 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 227
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 228 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 258
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 166 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 225
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 226 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 256
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 136 VETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
++ +D G AK + T TL G E YL PE + VD ++ GV++ E+ +
Sbjct: 201 IQVTDFGFAKRVK-GATWTLCGTPE---YLAPEIILSKGYNKAVDWWALGVLIYEMAA-- 254
Query: 196 CVERQGSDPKTLEKPVMIAIQFVKEK 221
G P ++P+ I + V K
Sbjct: 255 -----GYPPFFADQPIQIYEKIVSGK 275
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 223 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 223 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 223
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 224 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 254
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 145 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 204
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 205 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 223 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 136 VETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
++ +D GL K I T+ T YL PE + VD + GV++ E++ R
Sbjct: 148 IKITDFGLCKE-GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
Query: 196 CVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSL 228
K E +M I+F + P SL
Sbjct: 207 LPFYNQDHEKLFELILMEEIRFPRTLGPEAKSL 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 221 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 221 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 93/262 (35%), Gaps = 59/262 (22%)
Query: 27 YSLKKPCG-GSFSTVYTG------------VLAPGDKTNIGVK-KLDKVVHVA---HHKN 69
+ + +P G G F VY VL GV+ +L + V + H N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 70 LVCLLGYH---------IEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWR 120
++ L GY +E R VYK + S E T+ + + + C
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQK---LSKFDEQRTATYITELANALSYCHS 131
Query: 121 TRALACRI-----LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPV 175
R + I LL ++ +D G + ++ L G T YLPPE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXG---TLDYLPPEMIEGRMH 188
Query: 176 TVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF---------------VKE 220
KVD++S GV+ E + + + +T ++ + F +K
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 248
Query: 221 KPPLRPSLRIVALMLQSILEVP 242
P RP ML+ +LE P
Sbjct: 249 NPSQRP-------MLREVLEHP 263
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
+LL ++ +D G + ++ TL G T YLPPE KVD++S GV+
Sbjct: 143 LLLGSNGELKIADFGWSVHAPSSRRTTLCG---TLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 188 LLEII 192
E +
Sbjct: 200 CYEFL 204
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 139 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 198
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 199 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 229
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 221 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 138 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 197
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 198 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 140 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 199
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 200 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 141 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 200
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 201 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 231
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 219
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ +K + + F
Sbjct: 220 IIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 136 VETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
++ +D GL K I T+ T YL PE + VD + GV++ E++ R
Sbjct: 149 IKITDFGLCKE-GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
Query: 196 CVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSL 228
K E +M I+F + P SL
Sbjct: 208 LPFYNQDHEKLFELILMEEIRFPRTLGPEAKSL 240
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE---CLRPTWQQRMQDCIRDCW---R 120
H+++V G+ + + +V + RS+ L P + ++ + C R
Sbjct: 80 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 139
Query: 121 TRALA-----CRILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRNM 173
R + + L++ V+ D GLA + + + +TL G T Y+ PE
Sbjct: 140 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPEVLSKK 196
Query: 174 PVTVKVDVYSFGVMLLEII 192
+ +VDV+S G ++ ++
Sbjct: 197 GHSFEVDVWSIGCIMYTLL 215
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 136 VETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
++ +D GL K I T+ T YL PE + VD + GV++ E++ R
Sbjct: 150 IKITDFGLCKE-GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
Query: 196 CVERQGSDPKTLEKPVMIAIQFVKEKPPLRPSL 228
K E +M I+F + P SL
Sbjct: 209 LPFYNQDHEKLFELILMEEIRFPRTLGPEAKSL 241
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 22/119 (18%)
Query: 128 ILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+ L+D V+ D GLA + + + + L G T Y+ PE + +VD++S G
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKXLCG---TPNYIAPEVLCKKGHSFEVDIWSLG 229
Query: 186 VMLLEII--------SC------RCVERQGSDPKTLEKPVMIAI--QFVKEKPPLRPSL 228
+L ++ SC R + + S P+ + PV A+ + + P LRPS+
Sbjct: 230 CILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHIN-PVASALIRRMLHADPTLRPSV 287
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 22/119 (18%)
Query: 128 ILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+ L+D V+ D GLA + + + + L G T Y+ PE + +VD++S G
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKDLCG---TPNYIAPEVLCKKGHSFEVDIWSLG 229
Query: 186 VMLLEII--------SC------RCVERQGSDPKTLEKPVMIAI--QFVKEKPPLRPSL 228
+L ++ SC R + + S P+ + PV A+ + + P LRPS+
Sbjct: 230 CILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHIN-PVASALIRRMLHADPTLRPSV 287
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 136 VETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
++ +D GLAK + +T L G E YL PE + VD ++ GV++ E+ +
Sbjct: 180 IQVTDFGLAKRVK-GRTWXLCGTPE---YLAPEIILSKGYNKAVDWWALGVLIYEMAA-- 233
Query: 196 CVERQGSDPKTLEKPVMIAIQFVKEK 221
G P ++P+ I + V K
Sbjct: 234 -----GYPPFFADQPIQIYEKIVSGK 254
>pdb|1C7D|A Chain A, Deoxy Rhb1.2 (Recombinant Hemoglobin)
Length = 284
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 13/59 (22%)
Query: 1 SGCLILNLEAD-PSQYENRVFGSFSHIYSLKKPCGGSFSTVYT-----GVLAPGDKTNI 53
S CL++ L A P+++ V S + S STV T GVL+P DKTN+
Sbjct: 102 SHCLLVTLAAHLPAEFTPAVHASLDKFLA-------SVSTVLTSKYRGGVLSPADKTNV 153
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 22/119 (18%)
Query: 128 ILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFG 185
+ L+D V+ D GLA + + + + L G T Y+ PE + +VD++S G
Sbjct: 157 LFLNDDMDVKIGDFGLATKIEFDGERKKDLCG---TPNYIAPEVLCKKGHSFEVDIWSLG 213
Query: 186 VMLLEII--------SC------RCVERQGSDPKTLEKPVMIAI--QFVKEKPPLRPSL 228
+L ++ SC R + + S P+ + PV A+ + + P LRPS+
Sbjct: 214 CILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHI-NPVASALIRRMLHADPTLRPSV 271
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 136 VETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
++ +D G AK + +T L G E YL PE + VD ++ GV++ E+ +
Sbjct: 180 IQVTDFGFAKRVK-GRTWXLAGTPE---YLAPEIILSKGYNKAVDWWALGVLIYEMAA-- 233
Query: 196 CVERQGSDPKTLEKPVMIAIQFVKEK 221
G P ++P+ I + V K
Sbjct: 234 -----GYPPFFADQPIQIYEKIVSGK 254
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE---CLRPTWQQRMQDCIRDCW---R 120
H+++V G+ + + +V + RS+ L P + ++ + C R
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 121 TRALA-----CRILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRNM 173
R + + L++ V+ D GLA + + + +TL G T Y+ PE
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPEVLSKK 192
Query: 174 PVTVKVDVYSFGVMLLEII 192
+ +VDV+S G ++ ++
Sbjct: 193 GHSFEVDVWSIGCIMYTLL 211
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLE 190
+V+ DLGLA L + + + G E + PE + VDVY+FG LE
Sbjct: 170 SVKIGDLGLATLKRASFAKAVIGTPE---FXAPEXYEE-KYDESVDVYAFGXCXLE 221
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Query: 67 HKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYE---CLRPTWQQRMQDCIRDCW---R 120
H+++V G+ + + +V + RS+ L P + ++ + C R
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 121 TRALA-----CRILLHDYFTVETSDLGLAKLLMIN--QTQTLTGMRETKGYLPPEWFRNM 173
R + + L++ V+ D GLA + + + +TL G T Y+ PE
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCG---TPNYIAPEVLSKK 192
Query: 174 PVTVKVDVYSFGVMLLEII 192
+ +VDV+S G ++ ++
Sbjct: 193 GHSFEVDVWSIGCIMYTLL 211
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKE 220
T YLPPE KVD++ GV+ E++ S +T + V + ++F
Sbjct: 184 TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPAS 243
Query: 221 KP 222
P
Sbjct: 244 VP 245
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTG-MRETKGYLPPEWFRNMPVTVKVDVYSFGV 186
ILL++ ++ +D G AK+L Q T Y+ PE D+++ G
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 187 MLLEIISCRCVERQGSDPKTLEKPVMIAIQF 217
++ ++++ R G++ K + + F
Sbjct: 223 IIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF 253
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
IL+ ++ +D GLA++ LT + T Y PE VD++S G +
Sbjct: 151 ILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 188 LLEIISCRCVERQGSDPKTLEK 209
E+ + + R SD L K
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGK 230
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
IL+ ++ +D GLA++ LT + T Y PE VD++S G +
Sbjct: 151 ILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 188 LLEIISCRCVERQGSDPKTLEK 209
E+ + + R SD L K
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGK 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 136 VETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
++ +D G AK + +T L G E YL PE + VD ++ GV++ E+ +
Sbjct: 180 IQVTDFGFAKRVK-GRTWXLXGTPE---YLAPEIILSKGYNKAVDWWALGVLIYEMAA-- 233
Query: 196 CVERQGSDPKTLEKPVMIAIQFVKEK 221
G P ++P+ I + V K
Sbjct: 234 -----GYPPFFADQPIQIYEKIVSGK 254
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF--- 217
T YLPPE KVD++S GV+ E + + + +T ++ + F
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 233
Query: 218 ------------VKEKPPLRPSLRIVALMLQSILEVP 242
+K P RP ML+ +LE P
Sbjct: 234 VTEGARDLISRLLKHNPSQRP-------MLREVLEHP 263
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF--- 217
T YLPPE KVD++S GV+ E + + + +T ++ + F
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 231
Query: 218 ------------VKEKPPLRPSLRIVALMLQSILEVP 242
+K P RP ML+ +LE P
Sbjct: 232 VTEGARDLISRLLKHNPSQRP-------MLREVLEHP 261
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISC 194
T++ D GLA+ N +T T+ Y PE M VD++S G ++ E++
Sbjct: 162 TLKILDFGLARTASTNFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
Query: 195 RCVERQGSD 203
+ QG+D
Sbjct: 220 SVI-FQGTD 227
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 128 ILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVM 187
IL+ ++ +D GLA++ LT + T Y PE VD++S G +
Sbjct: 151 ILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 188 LLEIISCRCVERQGSDPKTLEK 209
E+ + + R SD L K
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGK 230
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 27.3 bits (59), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 136 VETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR 195
++ +D GLAK + +T L G E YL PE + VD ++ GV++ E+ +
Sbjct: 180 IKVTDFGLAKRVK-GRTWXLCGTPE---YLAPEIILSKGYNKAVDWWALGVLIYEMAA-- 233
Query: 196 CVERQGSDPKTLEKPVMIAIQFVKEK 221
G P ++P+ I + V K
Sbjct: 234 -----GYPPFFADQPIQIYEKIVSGK 254
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF--- 217
T YLPPE KVD++S GV+ E + + + +T ++ + F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 218 ------------VKEKPPLRPSLRIVALMLQSILEVP 242
+K P RP ML+ +LE P
Sbjct: 229 VTEGARDLISRLLKHNPSQRP-------MLREVLEHP 258
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 27.3 bits (59), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF--- 217
T YLPPE KVD++S GV+ E + + + +T ++ + F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 218 ------------VKEKPPLRPSLRIVALMLQSILEVP 242
+K P RP ML+ +LE P
Sbjct: 229 VTEGARDLISRLLKHNPSQRP-------MLREVLEHP 258
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 27.3 bits (59), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF--- 217
T YLPPE KVD++S GV+ E + + + +T ++ + F
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 230
Query: 218 ------------VKEKPPLRPSLRIVALMLQSILEVP 242
+K P RP ML+ +LE P
Sbjct: 231 VTEGARDLISRLLKHNPSQRP-------MLREVLEHP 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 27.3 bits (59), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF--- 217
T YLPPE KVD++S GV+ E + + + +T ++ + F
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 229
Query: 218 ------------VKEKPPLRPSLRIVALMLQSILEVP 242
+K P RP ML+ +LE P
Sbjct: 230 VTEGARDLISRLLKHNPSQRP-------MLREVLEHP 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 27.3 bits (59), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF--- 217
T YLPPE KVD++S GV+ E + + + +T ++ + F
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 230
Query: 218 ------------VKEKPPLRPSLRIVALMLQSILEVP 242
+K P RP ML+ +LE P
Sbjct: 231 VTEGARDLISRLLKHNPSQRP-------MLREVLEHP 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF--- 217
T YLPPE KVD++S GV+ E + + + +T ++ + F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 218 ------------VKEKPPLRPSLRIVALMLQSILEVP 242
+K P RP ML+ +LE P
Sbjct: 229 VTEGARDLISRLLKHNPSQRP-------MLREVLEHP 258
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 27.3 bits (59), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF--- 217
T YLPPE KVD++S GV+ E + + + +T ++ + F
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 231
Query: 218 ------------VKEKPPLRPSLRIVALMLQSILEVP 242
+K P RP ML+ +LE P
Sbjct: 232 VTEGARDLISRLLKHNPSQRP-------MLREVLEHP 261
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF--- 217
T YLPPE KVD++S GV+ E + + + +T ++ + F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 218 ------------VKEKPPLRPSLRIVALMLQSILEVP 242
+K P RP ML+ +LE P
Sbjct: 229 VTEGARDLISRLLKHNPSQRP-------MLREVLEHP 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQF--- 217
T YLPPE KVD++S GV+ E + + + +T ++ + F
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 218 ------------VKEKPPLRPSLRIVALMLQSILEVP 242
+K P RP ML+ +LE P
Sbjct: 229 VTEGARDLISRLLKHNPSQRP-------MLREVLEHP 258
>pdb|1O1N|A Chain A, Deoxy Hemoglobin (A-Glyglygly-C:v1m,L29w; B,D:v1m)
Length = 285
Score = 27.3 bits (59), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 14/60 (23%)
Query: 1 SGCLILNLEAD-PSQYENRVFGSFSHIYSLKKPCGGSFSTVYT------GVLAPGDKTNI 53
S CL++ L A P+++ V S + S STV T GVL+P DKTN+
Sbjct: 102 SHCLLVTLAAHLPAEFTPAVHASLDKFLA-------SVSTVLTSKYRGGGVLSPADKTNV 154
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.139 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,525,392
Number of Sequences: 62578
Number of extensions: 289450
Number of successful extensions: 1641
Number of sequences better than 100.0: 526
Number of HSP's better than 100.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 332
Number of HSP's that attempted gapping in prelim test: 1222
Number of HSP's gapped (non-prelim): 628
length of query: 266
length of database: 14,973,337
effective HSP length: 97
effective length of query: 169
effective length of database: 8,903,271
effective search space: 1504652799
effective search space used: 1504652799
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)