Query         042690
Match_columns 266
No_of_seqs    129 out of 1641
Neff          9.9 
Searched_HMMs 29240
Date          Mon Mar 25 14:51:20 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042690.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042690hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4b9d_A Serine/threonine-protei 100.0 2.8E-50 9.5E-55  342.3  14.1  215   17-233    17-276 (350)
  2 4g3f_A NF-kappa-beta-inducing  100.0   2E-49 6.8E-54  335.6  17.6  221   22-243    56-319 (336)
  3 4aoj_A High affinity nerve gro 100.0 3.6E-49 1.2E-53  334.6  19.1  221   23-243    40-322 (329)
  4 4gt4_A Tyrosine-protein kinase 100.0 1.2E-49 3.9E-54  334.7  14.7  219   22-240    24-306 (308)
  5 4asz_A BDNF/NT-3 growth factor 100.0 1.5E-49 5.1E-54  332.7  13.2  220   23-242    12-291 (299)
  6 4fih_A Serine/threonine-protei 100.0   1E-48 3.6E-53  332.1  16.9  208   24-233    74-323 (346)
  7 3omv_A RAF proto-oncogene seri 100.0 7.3E-48 2.5E-52  322.9  19.0  214   22-240    34-300 (307)
  8 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.4E-48 4.7E-53  326.8  12.7  209   23-232    31-283 (311)
  9 4fie_A Serine/threonine-protei 100.0 7.9E-48 2.7E-52  334.4  17.2  208   24-233   151-400 (423)
 10 3hyh_A Carbon catabolite-derep 100.0   2E-47   7E-52  315.4  15.7  207   23-233    12-262 (275)
 11 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-47 4.3E-52  320.7  14.3  205   23-228    23-271 (304)
 12 3fpq_A Serine/threonine-protei 100.0 4.2E-47 1.4E-51  316.0  16.8  203   26-233    28-282 (290)
 13 4ase_A Vascular endothelial gr 100.0 6.5E-47 2.2E-51  323.3  13.0  221   22-242    62-349 (353)
 14 3hmm_A TGF-beta receptor type- 100.0 2.5E-46 8.4E-51  314.6  13.6  214   25-242     4-299 (303)
 15 4g31_A Eukaryotic translation  100.0 1.2E-45 4.1E-50  309.4  13.6  206   24-233     5-279 (299)
 16 4b99_A Mitogen-activated prote 100.0 5.5E-43 1.9E-47  303.8  16.2  208   24-233    54-344 (398)
 17 3v5w_A G-protein coupled recep 100.0 1.3E-42 4.5E-47  314.9  17.6  207   22-232   187-448 (689)
 18 4f9c_A Cell division cycle 7-r 100.0 2.8E-42 9.6E-47  296.2  18.1  210   24-233    21-352 (361)
 19 3uto_A Twitchin; kinase, muscl 100.0 4.6E-42 1.6E-46  311.2  15.6  208   23-233   156-410 (573)
 20 3p86_A Serine/threonine-protei 100.0 2.4E-40 8.3E-45  279.2  16.8  221   22-246    35-304 (309)
 21 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-39 4.2E-44  274.7  20.0  218   23-241     9-283 (310)
 22 3zgw_A Maternal embryonic leuc 100.0 6.6E-40 2.3E-44  280.5  16.7  211   23-234     9-261 (347)
 23 4eqm_A Protein kinase; transfe 100.0 7.6E-40 2.6E-44  274.2  16.4  222   24-246    11-281 (294)
 24 3fxz_A Serine/threonine-protei 100.0   8E-40 2.7E-44  274.5  16.4  209   23-233    19-269 (297)
 25 3fe3_A MAP/microtubule affinit 100.0 1.2E-39   4E-44  277.2  17.0  210   22-234    13-265 (328)
 26 1o6l_A RAC-beta serine/threoni 100.0 7.2E-39 2.4E-43  273.2  19.6  210   22-233     3-260 (337)
 27 2psq_A Fibroblast growth facto 100.0 4.4E-39 1.5E-43  278.0  18.1  218   23-240    80-364 (370)
 28 4hcu_A Tyrosine-protein kinase 100.0 2.3E-39 7.8E-44  267.6  15.3  218   22-241     8-267 (269)
 29 3kul_A Ephrin type-A receptor  100.0 2.7E-39 9.2E-44  274.6  15.1  222   23-244    48-317 (325)
 30 3soc_A Activin receptor type-2 100.0 3.1E-39 1.1E-43  273.8  15.2  216   22-241    22-319 (322)
 31 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.8E-39 9.5E-44  266.9  13.5  218   23-242     7-266 (268)
 32 3cbl_A C-FES, proto-oncogene t 100.0 2.7E-39 9.1E-44  280.0  13.2  218   22-240   112-374 (377)
 33 3gen_A Tyrosine-protein kinase 100.0 7.4E-39 2.5E-43  266.4  14.9  219   21-241    21-281 (283)
 34 3ugc_A Tyrosine-protein kinase 100.0 6.3E-39 2.2E-43  268.4  14.0  225   11-241     3-292 (295)
 35 1fot_A TPK1 delta, CAMP-depend 100.0 3.4E-38 1.1E-42  267.1  18.5  207   22-233     4-258 (318)
 36 4dc2_A Protein kinase C IOTA t 100.0 3.1E-38 1.1E-42  274.3  18.6  205   22-228    50-307 (396)
 37 4fr4_A YANK1, serine/threonine 100.0 2.3E-38 7.7E-43  274.3  17.3  210   21-233    12-271 (384)
 38 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.1E-38 3.9E-43  271.8  15.0  209   22-234     7-259 (336)
 39 2h34_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42  264.3  19.3  224   22-246    32-302 (309)
 40 3txo_A PKC-L, NPKC-ETA, protei 100.0 6.9E-39 2.3E-43  275.0  13.6  210   22-233    21-280 (353)
 41 3uim_A Brassinosteroid insensi 100.0 4.2E-39 1.4E-43  273.2  11.8  217   22-240    28-311 (326)
 42 1opk_A P150, C-ABL, proto-onco 100.0 6.4E-39 2.2E-43  286.8  13.1  218   22-240   218-478 (495)
 43 1xjd_A Protein kinase C, theta 100.0 1.6E-38 5.5E-43  271.8  14.6  210   21-232    14-268 (345)
 44 3v8s_A RHO-associated protein  100.0 2.3E-38   8E-43  276.4  15.5  211   22-233    67-329 (410)
 45 1qcf_A Haematopoetic cell kina 100.0 1.1E-38 3.7E-43  282.6  13.6  219   22-243   186-447 (454)
 46 2r5t_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42  271.6  17.1  207   22-230    36-286 (373)
 47 3soa_A Calcium/calmodulin-depe 100.0 6.3E-38 2.2E-42  276.4  18.0  209   24-234    11-268 (444)
 48 3tki_A Serine/threonine-protei 100.0 1.7E-38 5.9E-43  269.4  13.7  211   23-234     6-262 (323)
 49 2izr_A Casein kinase I isoform 100.0 1.6E-37 5.3E-42  264.1  19.5  215   24-240     9-281 (330)
 50 3kex_A Receptor tyrosine-prote 100.0 4.4E-38 1.5E-42  267.0  16.1  218   23-242    12-278 (325)
 51 3t9t_A Tyrosine-protein kinase 100.0 2.6E-38 8.8E-43  260.7  14.2  218   22-241     6-265 (267)
 52 2yab_A Death-associated protei 100.0 4.1E-38 1.4E-42  270.9  16.0  206   25-233    13-272 (361)
 53 3a8x_A Protein kinase C IOTA t 100.0 8.4E-38 2.9E-42  267.5  17.8  205   22-228     7-264 (345)
 54 1mp8_A Focal adhesion kinase 1 100.0 3.8E-38 1.3E-42  262.0  15.3  218   22-240    13-276 (281)
 55 4e5w_A Tyrosine-protein kinase 100.0 6.1E-38 2.1E-42  263.1  16.6  216   24-239    21-301 (302)
 56 1tki_A Titin; serine kinase, m 100.0 2.2E-38 7.6E-43  268.6  14.0  208   23-233     4-257 (321)
 57 3c0i_A Peripheral plasma membr 100.0 3.1E-38 1.1E-42  270.8  15.0  207   25-233    25-286 (351)
 58 3l9p_A Anaplastic lymphoma kin 100.0 2.3E-38   8E-43  273.2  14.2  220   23-242    70-347 (367)
 59 1k9a_A Carboxyl-terminal SRC k 100.0 8.3E-38 2.8E-42  276.6  18.1  214   21-241   190-446 (450)
 60 1csn_A Casein kinase-1; phosph 100.0 3.4E-37 1.2E-41  258.0  20.9  217   24-242    10-285 (298)
 61 2qkw_B Protein kinase; three-h 100.0 2.5E-38 8.4E-43  268.0  13.9  220   23-244    38-319 (321)
 62 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.6E-38 2.9E-42  267.9  17.4  207   22-233    39-293 (350)
 63 1luf_A Muscle-specific tyrosin 100.0 3.6E-38 1.2E-42  269.0  15.0  221   22-242    45-337 (343)
 64 2qol_A Ephrin receptor; recept 100.0   2E-38 6.8E-43  274.1  13.5  220   23-242    44-311 (373)
 65 3vhe_A Vascular endothelial gr 100.0 3.8E-38 1.3E-42  270.6  15.0  219   22-240    20-355 (359)
 66 1rjb_A FL cytokine receptor; k 100.0 3.8E-38 1.3E-42  269.2  15.0  223   21-243    42-337 (344)
 67 3kfa_A Tyrosine-protein kinase 100.0 2.4E-38 8.1E-43  263.8  13.3  219   22-241    11-272 (288)
 68 3tt0_A Basic fibroblast growth 100.0 6.4E-38 2.2E-42  271.8  16.5  222   22-243    67-355 (382)
 69 3poz_A Epidermal growth factor 100.0 4.4E-38 1.5E-42  267.3  15.2  217   23-241    14-279 (327)
 70 2i0e_A Protein kinase C-beta I 100.0 8.5E-38 2.9E-42  268.1  16.9  210   22-233    18-276 (353)
 71 3uc3_A Serine/threonine-protei 100.0   9E-38 3.1E-42  268.9  17.1  212   20-234    16-275 (361)
 72 2y0a_A Death-associated protei 100.0 7.2E-38 2.5E-42  265.9  16.3  206   25-233    12-271 (326)
 73 3op5_A Serine/threonine-protei 100.0 1.5E-37 5.3E-42  267.7  18.4  217   24-241    35-330 (364)
 74 2ivs_A Proto-oncogene tyrosine 100.0   7E-38 2.4E-42  264.0  15.9  219   23-241    22-312 (314)
 75 2c30_A Serine/threonine-protei 100.0 1.4E-37 4.9E-42  263.5  17.5  205   26-233    47-294 (321)
 76 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.4E-38 8.1E-43  280.2  13.2  222   22-246   182-446 (452)
 77 3q4u_A Activin receptor type-1 100.0 5.5E-38 1.9E-42  263.1  14.8  211   24-238     8-300 (301)
 78 4ejn_A RAC-alpha serine/threon 100.0 6.7E-38 2.3E-42  276.9  15.6  210   22-233   146-404 (446)
 79 3dtc_A Mitogen-activated prote 100.0   6E-38 2.1E-42  259.2  14.3  210   22-238     5-271 (271)
 80 1t46_A HOMO sapiens V-KIT hard 100.0 8.4E-38 2.9E-42  263.4  15.4  220   22-241    21-308 (313)
 81 4aw2_A Serine/threonine-protei 100.0 7.9E-38 2.7E-42  275.1  15.7  211   22-233    72-338 (437)
 82 3niz_A Rhodanese family protei 100.0 1.4E-37 4.7E-42  262.5  16.5  209   21-233    18-300 (311)
 83 2zv2_A Calcium/calmodulin-depe 100.0 1.7E-37 5.9E-42  260.1  16.9  209   22-233    11-292 (298)
 84 2bdw_A Hypothetical protein K1 100.0 9.3E-38 3.2E-42  268.9  15.4  207   24-233    29-284 (362)
 85 2y94_A 5'-AMP-activated protei 100.0 1.6E-37 5.4E-42  275.8  17.3  209   22-233    14-266 (476)
 86 3fdn_A Serine/threonine-protei 100.0 1.7E-37 5.8E-42  257.7  16.3  209   22-234     7-258 (279)
 87 3dls_A PAS domain-containing s 100.0 4.7E-37 1.6E-41  261.8  19.5  208   24-234    24-275 (335)
 88 2wqm_A Serine/threonine-protei 100.0 1.6E-37 5.6E-42  261.6  16.1  223   21-245    29-302 (310)
 89 2w4o_A Calcium/calmodulin-depe 100.0 1.9E-37 6.6E-42  265.7  16.7  206   25-233    54-305 (349)
 90 3o0g_A Cell division protein k 100.0 1.5E-37 5.3E-42  259.7  15.6  208   23-233     1-282 (292)
 91 3a62_A Ribosomal protein S6 ki 100.0 2.3E-37 7.7E-42  263.0  16.8  210   23-233    16-276 (327)
 92 3lxp_A Non-receptor tyrosine-p 100.0   1E-37 3.5E-42  264.0  14.6  226   10-241    23-311 (318)
 93 3lb7_A RAF proto-oncogene seri 100.0 2.8E-37 9.5E-42  260.2  17.0  216   21-241    33-301 (307)
 94 3qd2_B Eukaryotic translation  100.0 5.4E-38 1.8E-42  266.4  12.6  209   24-233     6-325 (332)
 95 3gni_B Strad alpha; kinase fol 100.0 2.7E-37 9.1E-42  268.4  17.0  215   19-234    20-334 (389)
 96 2a19_B Interferon-induced, dou 100.0 2.2E-37 7.7E-42  257.2  15.7  217   25-244    12-278 (284)
 97 2pvf_A Fibroblast growth facto 100.0 1.3E-37 4.5E-42  265.0  14.5  221   22-242    33-320 (334)
 98 1qpc_A LCK kinase; alpha beta  100.0 8.7E-38   3E-42  259.4  13.0  219   21-242    10-271 (279)
 99 3kmu_A ILK, integrin-linked ki 100.0 1.7E-37 5.8E-42  256.1  14.7  210   22-240     8-270 (271)
100 3cc6_A Protein tyrosine kinase 100.0 2.8E-37 9.6E-42  256.7  15.9  218   22-240    10-273 (281)
101 4agu_A Cyclin-dependent kinase 100.0 2.2E-37 7.5E-42  260.8  15.4  209   23-233     2-284 (311)
102 3qup_A Tyrosine-protein kinase 100.0 1.6E-37 5.4E-42  263.1  14.5  222   22-243    21-301 (323)
103 1ob3_A PFPK5, cell division co 100.0   2E-37 6.7E-42  258.6  14.8  207   23-233     1-280 (288)
104 2eva_A TAK1 kinase - TAB1 chim 100.0 3.1E-37 1.1E-41  259.9  16.1  211   22-241     6-264 (307)
105 2vd5_A DMPK protein; serine/th 100.0 1.9E-37 6.4E-42  270.9  15.1  211   21-233    58-327 (412)
106 3cok_A Serine/threonine-protei 100.0 3.1E-37 1.1E-41  255.9  15.7  210   22-233     9-262 (278)
107 1nxk_A MAP kinase-activated pr 100.0 2.5E-37 8.7E-42  269.5  15.9  209   23-234    60-322 (400)
108 3lzb_A Epidermal growth factor 100.0 2.6E-37 8.8E-42  262.6  15.5  218   23-242    14-280 (327)
109 3kn6_A Ribosomal protein S6 ki 100.0 9.4E-38 3.2E-42  265.1  12.8  203   29-233    16-270 (325)
110 3g2f_A Bone morphogenetic prot 100.0 2.1E-37 7.2E-42  263.7  15.0  222   22-246    11-324 (336)
111 1kob_A Twitchin; kinase, intra 100.0 2.5E-37 8.5E-42  268.2  15.6  208   23-233    50-304 (387)
112 1mqb_A Ephrin type-A receptor  100.0 4.1E-37 1.4E-41  262.0  16.7  221   23-243    43-312 (333)
113 3ork_A Serine/threonine protei 100.0 1.2E-37 4.1E-42  262.7  13.2  217   24-241    12-282 (311)
114 2pmi_A Negative RE, cyclin-dep 100.0 2.7E-37 9.2E-42  261.4  15.3  209   22-233     3-293 (317)
115 3mdy_A Bone morphogenetic prot 100.0   4E-37 1.4E-41  261.8  16.4  217   24-244    37-335 (337)
116 2vgo_A Serine/threonine-protei 100.0   1E-36 3.5E-41  253.7  18.4  215   22-240    12-271 (284)
117 2eue_A Carbon catabolite derep 100.0 2.1E-37 7.2E-42  256.6  14.2  208   22-233    11-262 (275)
118 4f0f_A Serine/threonine-protei 100.0 8.6E-37 2.9E-41  254.4  17.9  208   23-237    18-286 (287)
119 3mtl_A Cell division protein k 100.0 2.2E-37 7.6E-42  262.6  14.5  215   23-240     1-290 (324)
120 3p1a_A MYT1 kinase, membrane-a 100.0 4.8E-37 1.6E-41  259.2  16.2  205   24-233    57-304 (311)
121 4euu_A Serine/threonine-protei 100.0 8.1E-37 2.8E-41  258.5  17.5  212   24-238     9-307 (319)
122 1vzo_A Ribosomal protein S6 ki 100.0 7.8E-37 2.7E-41  262.5  17.3  213   22-234    52-322 (355)
123 1fvr_A Tyrosine-protein kinase 100.0 4.4E-37 1.5E-41  261.0  15.6  219   22-243    23-303 (327)
124 3hko_A Calcium/calmodulin-depe 100.0 5.2E-37 1.8E-41  262.1  16.1  209   24-233    26-330 (345)
125 4fvq_A Tyrosine-protein kinase 100.0 9.8E-38 3.4E-42  260.2  11.3  216   23-243     7-278 (289)
126 3kk8_A Calcium/calmodulin depe 100.0 8.6E-37 2.9E-41  253.9  16.9  207   24-233     6-261 (284)
127 4aaa_A Cyclin-dependent kinase 100.0 1.7E-37 5.8E-42  264.0  12.9  215   17-233    18-306 (331)
128 2qr7_A Ribosomal protein S6 ki 100.0 2.2E-37 7.6E-42  264.5  13.7  218   24-243    22-289 (342)
129 3lxl_A Tyrosine-protein kinase 100.0 3.7E-37 1.3E-41  261.5  14.9  219   24-242    23-305 (327)
130 2v62_A Serine/threonine-protei 100.0 6.1E-37 2.1E-41  262.1  16.4  216   24-240    37-328 (345)
131 1u59_A Tyrosine-protein kinase 100.0 4.4E-37 1.5E-41  256.3  15.1  221   23-244     8-276 (287)
132 3og7_A AKAP9-BRAF fusion prote 100.0 5.2E-37 1.8E-41  256.2  15.3  212   24-240    24-288 (289)
133 2x4f_A Myosin light chain kina 100.0 5.8E-37   2E-41  264.9  15.9  206   25-233    90-342 (373)
134 4hgt_A Casein kinase I isoform 100.0 2.8E-36 9.7E-41  252.0  19.4  218   24-243     9-283 (296)
135 2i1m_A Macrophage colony-stimu 100.0 2.6E-37 8.9E-42  262.9  13.3  220   21-240    43-326 (333)
136 3oz6_A Mitogen-activated prote 100.0 3.3E-37 1.1E-41  267.8  14.2  209   23-234     8-329 (388)
137 2a2a_A Death-associated protei 100.0 8.1E-37 2.8E-41  258.8  16.1  206   25-233    13-272 (321)
138 3uzp_A CKI-delta, CKID, casein 100.0   4E-36 1.4E-40  251.2  20.1  219   24-244     9-284 (296)
139 1p4o_A Insulin-like growth fac 100.0 1.9E-37 6.4E-42  262.5  12.1  218   23-240    24-299 (322)
140 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-37 3.9E-42  281.1  11.3  220   22-244   265-527 (535)
141 3eqc_A Dual specificity mitoge 100.0 5.9E-37   2E-41  263.5  14.9  207   23-233    32-324 (360)
142 3g33_A Cell division protein k 100.0 1.1E-36 3.8E-41  256.3  16.2  206   24-233     9-296 (308)
143 3brb_A Proto-oncogene tyrosine 100.0 2.1E-36   7E-41  255.2  17.8  228   14-241    24-309 (313)
144 3llt_A Serine/threonine kinase 100.0 7.8E-37 2.7E-41  262.7  15.5  204   24-233    35-355 (360)
145 2xir_A Vascular endothelial gr 100.0 5.2E-37 1.8E-41  258.9  14.1  220   22-241    25-311 (316)
146 1xbb_A Tyrosine-protein kinase 100.0 9.6E-37 3.3E-41  254.8  15.4  218   22-240    14-279 (291)
147 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.4E-37 2.2E-41  260.3  14.2  210   21-233    31-318 (329)
148 3com_A Serine/threonine-protei 100.0 2.7E-36 9.4E-41  254.4  17.8  209   23-233    28-278 (314)
149 1byg_A CSK, protein (C-termina 100.0 4.7E-37 1.6E-41  254.9  12.8  213   21-240    18-273 (278)
150 3ttj_A Mitogen-activated prote 100.0 5.8E-37   2E-41  272.0  14.0  208   23-234    61-356 (464)
151 3f66_A Hepatocyte growth facto 100.0 1.1E-36 3.9E-41  254.9  15.1  219   23-241    24-292 (298)
152 2acx_A G protein-coupled recep 100.0 8.8E-37   3E-41  275.2  15.4  209   22-233   182-444 (576)
153 3pfq_A PKC-B, PKC-beta, protei 100.0 1.6E-36 5.5E-41  280.0  17.5  209   22-232   339-596 (674)
154 2h6d_A 5'-AMP-activated protei 100.0 2.8E-36 9.6E-41  249.8  17.1  209   23-234    10-262 (276)
155 3pls_A Macrophage-stimulating  100.0 2.1E-36 7.1E-41  253.2  16.5  217   25-241    22-288 (298)
156 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.9E-36 6.4E-41  272.1  17.3  209   22-232   183-447 (543)
157 3c1x_A Hepatocyte growth facto 100.0 6.4E-37 2.2E-41  264.6  13.6  219   25-243    90-358 (373)
158 3a7i_A MST3 kinase, serine/thr 100.0 2.3E-36 7.9E-41  253.8  16.6  209   23-234    21-271 (303)
159 3mwu_A Calmodulin-domain prote 100.0 3.2E-36 1.1E-40  268.9  18.3  207   24-234    22-277 (486)
160 2buj_A Serine/threonine-protei 100.0 2.6E-36   9E-41  254.9  16.8  222   22-244    27-310 (317)
161 2yex_A Serine/threonine-protei 100.0 1.1E-36 3.6E-41  252.2  14.2  210   23-233     6-261 (276)
162 2owb_A Serine/threonine-protei 100.0 1.1E-36 3.9E-41  259.4  14.6  209   23-233    40-291 (335)
163 1u5q_A Serine/threonine protei 100.0 2.4E-36 8.4E-41  258.7  16.6  203   25-234    55-306 (348)
164 2ozo_A Tyrosine-protein kinase 100.0 1.8E-36 6.2E-41  277.2  16.7  216   25-241   336-599 (613)
165 2jam_A Calcium/calmodulin-depe 100.0 3.1E-36 1.1E-40  253.1  16.8  206   24-233     9-261 (304)
166 2rku_A Serine/threonine-protei 100.0 3.4E-36 1.2E-40  251.7  16.8  210   23-234    14-266 (294)
167 2jii_A Serine/threonine-protei 100.0 3.7E-36 1.3E-40  257.9  17.4  219   24-243    42-339 (352)
168 3nyv_A Calmodulin-domain prote 100.0 3.9E-37 1.3E-41  274.6  11.8  211   25-239    27-289 (484)
169 2w1i_A JAK2; chromosomal rearr 100.0 1.7E-36 5.8E-41  257.3  15.1  217   24-240    41-322 (326)
170 3f3z_A Calcium/calmodulin-depe 100.0   4E-36 1.4E-40  249.1  16.9  205   25-233    10-261 (277)
171 3dbq_A Dual specificity protei 100.0 2.7E-36 9.3E-41  257.9  16.0  207   24-234     9-274 (343)
172 1u46_A ACK-1, activated CDC42  100.0 1.6E-36 5.5E-41  253.0  14.0  219   23-242    17-286 (291)
173 2yfx_A Tyrosine-protein kinase 100.0 6.9E-37 2.4E-41  259.8  11.9  221   22-242    28-306 (327)
174 3is5_A Calcium-dependent prote 100.0 4.1E-36 1.4E-40  250.4  16.3  206   24-233    22-278 (285)
175 3lij_A Calcium/calmodulin depe 100.0 3.4E-36 1.2E-40  269.2  16.8  205   25-233    38-291 (494)
176 2ac3_A MAP kinase-interacting  100.0 3.4E-36 1.1E-40  254.1  15.7  208   25-233    13-295 (316)
177 3gxj_A TGF-beta receptor type- 100.0   4E-38 1.4E-42  264.1   3.9  216   24-242     3-299 (303)
178 3bhy_A Death-associated protei 100.0   4E-36 1.4E-40  249.8  15.9  215   25-242     6-276 (283)
179 3mi9_A Cell division protein k 100.0 3.5E-36 1.2E-40  257.9  15.9  212   21-234    14-312 (351)
180 2r3i_A Cell division protein k 100.0 6.4E-36 2.2E-40  250.4  17.2  208   23-233     2-283 (299)
181 1t4h_A Serine/threonine-protei 100.0 6.5E-36 2.2E-40  249.5  17.1  205   24-233    26-282 (290)
182 1ua2_A CAK, cell division prot 100.0 2.4E-36 8.3E-41  258.5  14.6  209   23-234     9-292 (346)
183 3rp9_A Mitogen-activated prote 100.0 2.3E-36 7.7E-41  268.0  14.9  209   24-234    53-397 (458)
184 2nru_A Interleukin-1 receptor- 100.0 2.5E-36 8.6E-41  253.9  14.2  210   27-240    34-306 (307)
185 3nsz_A CK II alpha, casein kin 100.0   6E-36 2.1E-40  254.0  16.7  210   21-233    33-319 (330)
186 4eut_A Serine/threonine-protei 100.0 1.5E-36   5E-41  264.5  13.0  215   24-241     9-310 (396)
187 2y4i_B KSR2, HKSR2, kinase sup 100.0   3E-36   1E-40  254.7  14.5  228   11-243    20-305 (319)
188 3byv_A Rhoptry kinase; malaria 100.0 2.6E-37   9E-42  267.5   8.0  204   23-233    72-359 (377)
189 2j0j_A Focal adhesion kinase 1 100.0 4.2E-36 1.4E-40  276.4  16.5  217   23-240   389-651 (656)
190 1cm8_A Phosphorylated MAP kina 100.0 4.7E-36 1.6E-40  258.7  15.8  204   23-233    24-307 (367)
191 3q5i_A Protein kinase; CDPK, m 100.0 8.3E-36 2.9E-40  267.3  17.6  219   11-233    22-301 (504)
192 3ll6_A Cyclin G-associated kin 100.0 4.5E-36 1.5E-40  255.1  15.1  216   25-242    29-310 (337)
193 3i6u_A CDS1, serine/threonine- 100.0 8.6E-36 2.9E-40  261.4  17.3  206   24-233   135-399 (419)
194 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.3E-35 7.8E-40  254.2  19.5  219   23-241    64-340 (365)
195 2w5a_A Serine/threonine-protei 100.0 1.2E-36   4E-41  252.5  10.9  213   22-236     4-270 (279)
196 2zmd_A Dual specificity protei 100.0 1.1E-35 3.8E-40  258.3  17.6  206   25-234    57-321 (390)
197 3n9x_A Phosphotransferase; mal 100.0 5.6E-36 1.9E-40  263.6  15.8  209   23-233    25-361 (432)
198 2xrw_A Mitogen-activated prote 100.0 4.3E-36 1.5E-40  259.4  14.5  208   23-234    24-319 (371)
199 4fl3_A Tyrosine-protein kinase 100.0 5.9E-36   2E-40  274.6  16.0  209   30-239   375-630 (635)
200 1x8b_A WEE1HU, WEE1-like prote 100.0 7.3E-36 2.5E-40  248.3  15.1  204   24-233    11-279 (289)
201 1b6c_B TGF-B superfamily recep 100.0 4.1E-36 1.4E-40  256.2  13.9  216   24-242    42-338 (342)
202 3eb0_A Putative uncharacterize 100.0 1.1E-35 3.6E-40  257.9  16.4  207   23-233     6-321 (383)
203 2j7t_A Serine/threonine-protei 100.0 3.4E-36 1.2E-40  252.4  12.9  210   22-233    17-275 (302)
204 3fme_A Dual specificity mitoge 100.0 3.7E-36 1.2E-40  250.7  12.6  207   23-233     6-266 (290)
205 2y7j_A Phosphorylase B kinase  100.0 1.4E-35 4.9E-40  255.6  16.6  207   24-233    94-359 (365)
206 2clq_A Mitogen-activated prote 100.0 7.7E-36 2.6E-40  249.4  13.9  208   24-233    22-278 (295)
207 3sv0_A Casein kinase I-like; t 100.0 7.1E-35 2.4E-39  259.2  20.8  215   24-240     7-278 (483)
208 2x7f_A TRAF2 and NCK-interacti 100.0 1.2E-35   4E-40  251.9  15.0  211   21-233    21-286 (326)
209 1phk_A Phosphorylase kinase; g 100.0 2.7E-35 9.3E-40  246.5  16.9  210   21-233    14-283 (298)
210 3lm5_A Serine/threonine-protei 100.0 6.7E-36 2.3E-40  253.8  13.3  207   25-234    29-288 (327)
211 1blx_A Cyclin-dependent kinase 100.0   3E-35   1E-39  249.2  16.8  207   24-233    11-296 (326)
212 2vwi_A Serine/threonine-protei 100.0   5E-36 1.7E-40  251.3  11.6  212   21-233    12-287 (303)
213 3kvw_A DYRK2, dual specificity 100.0 2.1E-35 7.2E-40  259.6  15.7  203   25-233    98-408 (429)
214 3qyz_A Mitogen-activated prote 100.0 2.8E-35 9.7E-40  253.5  16.1  208   24-233    27-313 (364)
215 3q60_A ROP5B; pseudokinase, tr 100.0 5.7E-36 1.9E-40  258.5  11.6  205   23-233    61-352 (371)
216 2ycf_A Serine/threonine-protei 100.0 2.9E-35   1E-39  249.2  15.7  206   24-233    10-274 (322)
217 1j1b_A Glycogen synthase kinas 100.0 1.8E-35   6E-40  259.5  14.8  205   25-233    55-336 (420)
218 3an0_A Dual specificity mitoge 100.0 1.3E-35 4.4E-40  253.2  12.7  208   22-233    49-310 (340)
219 3a99_A Proto-oncogene serine/t 100.0 9.7E-35 3.3E-39  246.0  17.9  207   23-233    42-293 (320)
220 2wtk_C Serine/threonine-protei 100.0   8E-35 2.7E-39  244.4  17.1  210   23-234     4-264 (305)
221 3fhr_A MAP kinase-activated pr 100.0 2.2E-35 7.6E-40  251.6  13.9  216   24-243    28-299 (336)
222 4e7w_A Glycogen synthase kinas 100.0 2.8E-35 9.5E-40  256.2  14.4  205   24-233    40-321 (394)
223 2fst_X Mitogen-activated prote 100.0 1.4E-35 4.9E-40  255.7  12.4  205   23-234    28-312 (367)
224 3aln_A Dual specificity mitoge 100.0 3.6E-35 1.2E-39  249.1  14.6  208   22-233    20-285 (327)
225 4exu_A Mitogen-activated prote 100.0 5.4E-35 1.8E-39  252.5  15.7  205   24-234    42-324 (371)
226 3e3p_A Protein kinase, putativ 100.0 2.3E-35   8E-40  253.3  13.3  216   21-240    20-323 (360)
227 2pml_X PFPK7, Ser/Thr protein  100.0 3.8E-35 1.3E-39  250.9  14.2  205   23-233    30-322 (348)
228 1zy4_A Serine/threonine-protei 100.0 7.7E-35 2.6E-39  243.8  15.6  209   24-233     6-283 (303)
229 1z57_A Dual specificity protei 100.0   6E-35   2E-39  248.2  14.4  205   24-233    14-328 (339)
230 3rgf_A Cyclin-dependent kinase 100.0 5.6E-35 1.9E-39  255.1  14.5  208   26-234    22-334 (405)
231 2i6l_A Mitogen-activated prote 100.0 7.9E-35 2.7E-39  245.7  14.8  208   24-233    11-305 (320)
232 2b9h_A MAP kinase FUS3, mitoge 100.0 6.4E-35 2.2E-39  249.9  14.1  207   24-233    11-305 (353)
233 1wak_A Serine/threonine-protei 100.0   4E-35 1.4E-39  254.7  12.9  204   24-233    37-391 (397)
234 3pg1_A Mitogen-activated prote 100.0 7.7E-35 2.6E-39  250.4  13.9  208   21-233    19-316 (362)
235 2dyl_A Dual specificity mitoge 100.0 1.4E-34 4.9E-39  244.1  15.3  211   19-233    20-283 (318)
236 2iwi_A Serine/threonine-protei 100.0 1.2E-34   4E-39  244.3  14.7  206   24-233    31-283 (312)
237 2wei_A Calmodulin-domain prote 100.0 7.6E-35 2.6E-39  242.8  13.1  206   24-233    22-276 (287)
238 3coi_A Mitogen-activated prote 100.0 1.7E-34 5.7E-39  247.7  14.2  204   24-233    24-305 (353)
239 3cek_A Dual specificity protei 100.0 3.5E-34 1.2E-38  241.6  15.7  209   22-234    26-293 (313)
240 2rio_A Serine/threonine-protei 100.0 2.1E-34 7.1E-39  253.7  14.7  205   26-233    17-295 (434)
241 2eu9_A Dual specificity protei 100.0 2.9E-34 9.9E-39  245.6  14.4  205   24-233    19-333 (355)
242 1q8y_A SR protein kinase; tran 100.0 1.5E-34 5.2E-39  249.3  12.6  205   23-233    18-333 (373)
243 2vx3_A Dual specificity tyrosi 100.0 5.7E-34 1.9E-38  246.9  14.8  172   23-200    53-260 (382)
244 3p23_A Serine/threonine-protei 100.0   1E-33 3.6E-38  248.9  15.9  207   24-233    24-283 (432)
245 3uqc_A Probable conserved tran 100.0 5.1E-33 1.7E-37  231.9  17.4  190   24-243    31-268 (286)
246 3qa8_A MGC80376 protein; kinas 100.0 1.3E-33 4.3E-38  257.5  10.9  217   23-242    13-311 (676)
247 2pzi_A Probable serine/threoni 100.0 3.1E-33 1.1E-37  259.0  11.5  208   24-238    80-326 (681)
248 3m2w_A MAP kinase-activated pr 100.0 4.6E-32 1.6E-36  227.3  16.6  199   23-245    16-270 (299)
249 3dzo_A Rhoptry kinase domain;  100.0 6.4E-31 2.2E-35  230.0  12.1  203   23-232    77-362 (413)
250 2vuw_A Serine/threonine-protei 100.0 1.1E-30 3.8E-35  222.4   0.3  195   22-232    18-329 (336)
251 4azs_A Methyltransferase WBDD;  99.9 2.2E-25 7.4E-30  201.9   2.2  166   60-227   293-469 (569)
252 3en9_A Glycoprotease, O-sialog  99.8 5.6E-22 1.9E-26  178.6   3.3  165   28-199   340-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.7 2.4E-17 8.2E-22  136.7   5.4  124   26-171    92-252 (282)
254 1zth_A RIO1 serine protein kin  99.4   8E-13 2.8E-17  108.0   7.0  116   25-147    48-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.2 1.2E-12   4E-17  112.2   0.3  120   26-147    97-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  98.6 4.1E-07 1.4E-11   73.8  11.8   74   23-99     13-101 (263)
257 1nd4_A Aminoglycoside 3'-phosp  98.4 1.3E-06 4.4E-11   70.5   9.1   72   23-96     19-103 (264)
258 3dxp_A Putative acyl-COA dehyd  97.6 5.9E-05   2E-09   63.9   5.7   71   22-95     36-128 (359)
259 4gkh_A Aminoglycoside 3'-phosp  96.8  0.0069 2.4E-07   48.7   9.0   68   31-99     31-111 (272)
260 3r70_A Aminoglycoside phosphot  96.7  0.0025 8.4E-08   53.0   6.0   69   18-96     31-115 (320)
261 3ovc_A Hygromycin-B 4-O-kinase  96.3   0.024 8.3E-07   47.9   9.7   71   22-95     39-121 (362)
262 2yle_A Protein spire homolog 1  95.9   0.046 1.6E-06   42.6   8.6  133   93-242    33-203 (229)
263 2olc_A MTR kinase, methylthior  95.2     0.2 6.7E-06   42.6  11.3   62   28-92     34-119 (397)
264 3d1u_A Putative fructosamine-3  95.0   0.072 2.5E-06   43.5   7.5   84   25-122    16-116 (288)
265 2pyw_A Uncharacterized protein  93.3    0.76 2.6E-05   39.4  10.9   61   27-92     37-122 (420)
266 3jr1_A Putative fructosamine-3  93.1    0.62 2.1E-05   38.4   9.6   87   25-122    37-137 (312)
267 3tdw_A Gentamicin resistance p  92.8    0.57   2E-05   38.3   9.0   63   29-97     24-102 (306)
268 2q83_A YTAA protein; 2635576,   92.2     1.4 4.7E-05   36.2  10.7   66   27-95     35-118 (346)
269 3sg8_A APH(2'')-ID; antibiotic  89.9   0.029   1E-06   46.0  -1.8   78  119-198   194-287 (304)
270 3f7w_A Putative fructosamine-3  83.8     2.9 9.8E-05   33.6   6.9   65   25-95     16-97  (288)
271 3dxq_A Choline/ethanolamine ki  78.9     4.4 0.00015   32.7   6.3   28  119-147   176-203 (301)
272 3cxl_A N-chimerin; SH2, RHO-GA  73.3    0.83 2.8E-05   39.9   0.5   48   27-78    145-214 (463)
273 3ats_A Putative uncharacterize  63.0     9.3 0.00032   31.5   4.9   72   26-97     22-122 (357)
274 2x6h_A GH13170P, VPS34, phosph  45.9      18  0.0006   33.3   4.0   30  116-145   545-575 (696)
275 3ats_A Putative uncharacterize  45.8     9.9 0.00034   31.3   2.2   30  118-147   224-253 (357)
276 2ppq_A HSK, HK, homoserine kin  45.6      11 0.00036   30.5   2.4   67   25-94     23-109 (322)
277 3csv_A Aminoglycoside phosphot  45.3     9.6 0.00033   31.1   2.0   29  120-148   187-219 (333)
278 3ls8_A Phosphatidylinositol 3-  43.0      17 0.00058   32.8   3.3   30  116-145   471-501 (614)
279 3f2s_A CK, chetk-alpha, cholin  37.3      17 0.00059   30.9   2.4   28  120-147   248-281 (401)
280 4ano_A ESSB; membrane protein,  37.2 1.4E+02  0.0048   22.9   7.6  106   64-199    46-163 (219)
281 2wxf_A Phosphatidylinositol-4,  37.0      28 0.00096   33.2   4.0   30  116-145   782-812 (940)
282 3c5i_A Choline kinase; choline  35.8      19 0.00064   29.8   2.4   63   28-94     37-120 (369)
283 1e7u_A Phosphatidylinositol 3-  34.9      32  0.0011   32.9   4.0   30  116-145   798-828 (961)
284 3feg_A Choline/ethanolamine ki  34.7      20 0.00069   30.1   2.4   28  120-147   224-255 (379)
285 3i1a_A Spectinomycin phosphotr  34.6      16 0.00055   30.0   1.8   27  121-147   211-237 (339)
286 2y3a_A Phosphatidylinositol-4,  34.4      33  0.0011   33.3   4.0   30  116-145   934-964 (1092)
287 1nw1_A Choline kinase (49.2 KD  33.9      15 0.00052   31.4   1.6   61   28-92     77-156 (429)
288 2qg7_A Ethanolamine kinase PV0  33.8      21 0.00072   30.9   2.4   62   28-94    112-187 (458)
289 2c6y_A Forkhead box protein K2  30.2      50  0.0017   22.4   3.3   33  207-239    18-50  (111)
290 1zyl_A Hypothetical protein YI  27.1      28 0.00094   28.1   2.0   26  120-147   199-224 (328)
291 3hhm_A Phosphatidylinositol-4,  26.8      52  0.0018   31.9   3.9   30  116-145   931-961 (1091)
292 3bpy_A FORK head domain, forkh  26.6      74  0.0025   20.3   3.5   31  209-239     9-39  (85)
293 3i1a_A Spectinomycin phosphotr  25.7 2.4E+02  0.0081   22.8   7.5   60   33-95     32-108 (339)
294 3g15_A CK, chetk-alpha, cholin  25.7      35  0.0012   28.7   2.4   29  119-147   247-281 (401)
295 2hdc_A Protein (transcription   22.3 1.1E+02  0.0038   20.1   3.8   30  209-238     6-35  (97)
296 1vtn_C HNF-3/FORK head DNA-rec  21.9 1.1E+02  0.0037   20.3   3.7   31  209-239     7-37  (102)
297 3l2c_A Forkhead box protein O4  21.9      96  0.0033   20.9   3.5   32  208-239    27-58  (110)
298 1kdx_B CREB; complex (transcri  21.6      54  0.0018   16.1   1.6   15  223-237    11-25  (28)
299 3coa_C Forkhead box protein O1  20.6 1.1E+02  0.0038   20.9   3.7   31  208-238    14-44  (117)
300 2a07_F Forkhead box protein P2  20.6 1.1E+02  0.0038   19.9   3.5   31  209-239     7-37  (93)
301 2hfh_A Genesis, HFH-2; HNF-3 h  20.1 1.1E+02  0.0036   20.7   3.4   30  209-238     7-36  (109)

No 1  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=2.8e-50  Score=342.30  Aligned_cols=215  Identities=21%  Similarity=0.255  Sum_probs=179.2

Q ss_pred             hhHhcccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeC
Q 042690           17 NRVFGSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQ   80 (266)
Q Consensus        17 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~   80 (266)
                      +.+++++++|.+++.||+|+||+||+|.++ .+++.||||++.                ++++.++|||||++++++.++
T Consensus        17 n~~f~sme~Y~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~   95 (350)
T 4b9d_A           17 NLYFQSMEKYVRLQKIGEGSFGKAILVKST-EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN   95 (350)
T ss_dssp             CCBCSCCCCEEEEEEC------CEEEEEET-TTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             ccCCCcccceEEeEEEecCCCeEEEEEEEC-CCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC
Confidence            445677889999999999999999999986 678999999874                378899999999999999999


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhcCC--C------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceee
Q 042690           81 ECRLLVYKFMHNRSISSLLYECLR--P------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLL  147 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~--~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~  147 (266)
                      +.+|+|||||++|+|.+++.....  +      .+..++..++.++|.++++|+     |||++.+|.+||+|||+|+..
T Consensus        96 ~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  175 (350)
T 4b9d_A           96 GSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL  175 (350)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceee
Confidence            999999999999999999975432  2      355677788899998888888     999999999999999999876


Q ss_pred             ccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC----------------CCccccchHH
Q 042690          148 MINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG----------------SDPKTLEKPV  211 (266)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~----------------~~~~~~~~~~  211 (266)
                      ... ........||+.|||||++.+..++.++|||||||++|+|+||+.||...                .+...+..+.
T Consensus       176 ~~~-~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~  254 (350)
T 4b9d_A          176 NST-VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLR  254 (350)
T ss_dssp             CHH-HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHH
T ss_pred             cCC-cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHH
Confidence            422 12223467999999999999999999999999999999999999999762                2234567788


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 042690          212 MIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       212 ~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      +++.+||+.||.+|||++|+++
T Consensus       255 ~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          255 SLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999999975


No 2  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=2e-49  Score=335.55  Aligned_cols=221  Identities=17%  Similarity=0.107  Sum_probs=186.7

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------HHhhhcCCCceeeeeeEEEeCCeEEEEEEcCCC
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHN   92 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   92 (266)
                      ....|.+.++||+|+||+||+|+++ .+++.||||++.         .+++.++|||||++++++.+++.+|||||||++
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~-~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  134 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDK-QTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG  134 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             chhheEeCcEeccCCCeEEEEEEEC-CCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence            4567899999999999999999986 678999999875         478889999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCC-EEEEeecCcceeecccccc----ccc
Q 042690           93 RSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYF-TVETSDLGLAKLLMINQTQ----TLT  156 (266)
Q Consensus        93 ~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~-~~~l~Dfg~a~~~~~~~~~----~~~  156 (266)
                      |+|.++++..+.++      +..++..++.++|.++++|+     |||++.+| .+||+|||+|+........    ...
T Consensus       135 g~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~  214 (336)
T 4g3f_A          135 GSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD  214 (336)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------C
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCC
Confidence            99999998777655      44566677789998888888     99999998 5999999999876432211    122


Q ss_pred             cccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------CccccchHHHHHHHhh
Q 042690          157 GMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLEKPVMIAIQFV  218 (266)
Q Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~~~~~l~~~cl  218 (266)
                      ...||+.|||||++.+.+++.++|||||||++|+|+||+.||....                  ++..+..+.+++.+||
T Consensus       215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L  294 (336)
T 4g3f_A          215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGL  294 (336)
T ss_dssp             CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHT
T ss_pred             ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHc
Confidence            3579999999999999999999999999999999999999997621                  2345567889999999


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          219 KEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       219 ~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                      +.||.+|||+.|+++.|........
T Consensus       295 ~~dP~~R~sa~el~~~l~~~l~~~~  319 (336)
T 4g3f_A          295 RKEPVHRASAMELRRKVGKALQEVG  319 (336)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             cCCHhHCcCHHHHHHHHHHHHhhhh
Confidence            9999999999999999988866544


No 3  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=3.6e-49  Score=334.61  Aligned_cols=221  Identities=19%  Similarity=0.225  Sum_probs=178.8

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcC----CCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAP----GDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~----~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ..++.+.++||+|+||+||+|.++.    .++..||||++.              ++++.++|||||++++++.+++..+
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            3578899999999999999999752    357889999875              3788999999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcC---------------CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEE
Q 042690           85 LVYKFMHNRSISSLLYECL---------------RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVET  138 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~---------------~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l  138 (266)
                      +|||||++|+|.++++...               .++      +..++..++.++|..+++|+     |||++.++.+||
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki  199 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI  199 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEE
Confidence            9999999999999997542               233      44556666788888888887     999999999999


Q ss_pred             eecCcceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccC----------------
Q 042690          139 SDLGLAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQ----------------  200 (266)
Q Consensus       139 ~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~----------------  200 (266)
                      +|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||..                
T Consensus       200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~  279 (329)
T 4aoj_A          200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL  279 (329)
T ss_dssp             CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCC
T ss_pred             cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            999999876433222 2334678999999999999999999999999999999999 8999976                


Q ss_pred             CCCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          201 GSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       201 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                      ..+...++.+.+++.+||+.||.+|||++||++.|+.+.+.|+
T Consensus       280 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp  322 (329)
T 4aoj_A          280 ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP  322 (329)
T ss_dssp             CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred             CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence            2344566788999999999999999999999999999988653


No 4  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1.2e-49  Score=334.73  Aligned_cols=219  Identities=19%  Similarity=0.247  Sum_probs=183.9

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEc----CCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCe
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLA----PGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQEC   82 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~   82 (266)
                      .++++++.++||+|+||+||+|.+.    ..+++.||||++.               .++++++|||||+++|++.+++.
T Consensus        24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~  103 (308)
T 4gt4_A           24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP  103 (308)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             CHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence            4568899999999999999999974    2356789999874               37889999999999999999999


Q ss_pred             EEEEEEcCCCCCHHHHHhhcC----------------CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCE
Q 042690           83 RLLVYKFMHNRSISSLLYECL----------------RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFT  135 (266)
Q Consensus        83 ~~lv~e~~~~~~L~~~l~~~~----------------~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~  135 (266)
                      .++|||||++|+|.+++....                .++      +..++..++.++|.++++|+     |||+++++.
T Consensus       104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCC
Confidence            999999999999999996431                233      45566677788888888887     999999999


Q ss_pred             EEEeecCcceeeccccc-cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccC-------------
Q 042690          136 VETSDLGLAKLLMINQT-QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQ-------------  200 (266)
Q Consensus       136 ~~l~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~-------------  200 (266)
                      +||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |..||.+             
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~  263 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR  263 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTT
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            99999999987643322 23345678999999999998899999999999999999998 8889876             


Q ss_pred             ---CCCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          201 ---GSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       201 ---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                         ..+...+..+.+++.+||+.||.+||++.+|++.|+.+..
T Consensus       264 ~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n  306 (308)
T 4gt4_A          264 QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN  306 (308)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred             CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence               2345566788899999999999999999999999998753


No 5  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.5e-49  Score=332.74  Aligned_cols=220  Identities=18%  Similarity=0.250  Sum_probs=183.0

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcC----CCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAP----GDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~----~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .++|.+.++||+|+||+||+|.+..    .++..||||++.              +++++++|||||++++++.+++..+
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~   91 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   91 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            3578999999999999999999742    357789999875              3788999999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcC-------------CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEee
Q 042690           85 LVYKFMHNRSISSLLYECL-------------RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSD  140 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~-------------~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~D  140 (266)
                      +|||||++|+|.++++..+             .++      +..++..++.++|.++++|+     |||++.++.+||+|
T Consensus        92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~D  171 (299)
T 4asz_A           92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGD  171 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECC
Confidence            9999999999999997532             244      44566667788888888888     99999999999999


Q ss_pred             cCcceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccC----------------CC
Q 042690          141 LGLAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQ----------------GS  202 (266)
Q Consensus       141 fg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~----------------~~  202 (266)
                      ||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||..                ..
T Consensus       172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~  251 (299)
T 4asz_A          172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQR  251 (299)
T ss_dssp             CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCC
T ss_pred             cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            9999865433222 2233568999999999999899999999999999999999 8999976                22


Q ss_pred             CccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          203 DPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       203 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                      +...+..+.+++.+||+.||.+|||+++|.+.|+.+.+.+
T Consensus       252 p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~  291 (299)
T 4asz_A          252 PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS  291 (299)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence            4456678899999999999999999999999999987643


No 6  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1e-48  Score=332.12  Aligned_cols=208  Identities=16%  Similarity=0.199  Sum_probs=179.8

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEc
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKF   89 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   89 (266)
                      +.|.++++||+|+||+||+|.++ .+++.||||++.              .+++.++|||||++++++.+++.+||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~-~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             HhcEEeEEeecCcCeEEEEEEEC-CCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            46999999999999999999986 678999999874              388899999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCC-----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccccccc
Q 042690           90 MHNRSISSLLYECLR-----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTLTGMR  159 (266)
Q Consensus        90 ~~~~~L~~~l~~~~~-----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~  159 (266)
                      |++|+|.+++....-     ..+..++..++.++|.++++|+     |||++.+|.+||+|||+|+.... .........
T Consensus       153 ~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~-~~~~~~~~~  231 (346)
T 4fih_A          153 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKSLV  231 (346)
T ss_dssp             CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS-SSCCBCCCC
T ss_pred             CCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCC-CCCcccccc
Confidence            999999999975321     2355667778899998888888     99999999999999999987643 223344578


Q ss_pred             CCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------CccccchHHHHHHHhhhcC
Q 042690          160 ETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLEKPVMIAIQFVKEK  221 (266)
Q Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~~~~~l~~~cl~~~  221 (266)
                      ||+.|||||++.+..|+.++|||||||++|||++|+.||....                  ....+..+.+++.+||+.|
T Consensus       232 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~d  311 (346)
T 4fih_A          232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD  311 (346)
T ss_dssp             SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSS
T ss_pred             cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999997621                  1234567889999999999


Q ss_pred             CCCCCCHHHHHH
Q 042690          222 PPLRPSLRIVAL  233 (266)
Q Consensus       222 p~~Rps~~~il~  233 (266)
                      |.+|||++|+++
T Consensus       312 P~~R~ta~e~l~  323 (346)
T 4fih_A          312 PAQRATAAELLK  323 (346)
T ss_dssp             TTTSCCHHHHTT
T ss_pred             hhHCcCHHHHhc
Confidence            999999999875


No 7  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=7.3e-48  Score=322.85  Aligned_cols=214  Identities=21%  Similarity=0.287  Sum_probs=172.1

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      +.+++.+.++||+|+||+||+|.++    ..||||++.                +++++++|||||++++++. ++.+++
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~----~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~i  108 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWH----GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAI  108 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESS----SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEEC----CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEE
Confidence            4678899999999999999999974    247887764                3788999999999999875 456899


Q ss_pred             EEEcCCCCCHHHHHhhc-CCCCH------HHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc-c
Q 042690           86 VYKFMHNRSISSLLYEC-LRPTW------QQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ-T  152 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~-~~~~~------~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~-~  152 (266)
                      |||||++|+|.+++... ..+++      ..++..++.++|+.+++|+     |||++.++.+||+|||+|+...... .
T Consensus       109 VmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~  188 (307)
T 3omv_A          109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS  188 (307)
T ss_dssp             EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred             EEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence            99999999999999754 34554      4556667788898888887     9999999999999999998754322 2


Q ss_pred             cccccccCCCCcCCccccCC---CCCCcccchhhHHHHHHHHHhCCCcccCCC---------------------Cccccc
Q 042690          153 QTLTGMRETKGYLPPEWFRN---MPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------------DPKTLE  208 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------------~~~~~~  208 (266)
                      .......||+.|||||++.+   .+++.++|||||||++|||+||+.||.+..                     ++..+.
T Consensus       189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  268 (307)
T 3omv_A          189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK  268 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCH
T ss_pred             eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchH
Confidence            23345679999999998853   468999999999999999999999997511                     123456


Q ss_pred             hHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          209 KPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      .+.+++.+||+.||.+|||+.+|++.|+.+..
T Consensus       269 ~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~  300 (307)
T 3omv_A          269 AMKRLVADCVKKVKEERPLFPQILSSIELLQH  300 (307)
T ss_dssp             HHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            78899999999999999999999999988754


No 8  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=1.4e-48  Score=326.83  Aligned_cols=209  Identities=16%  Similarity=0.174  Sum_probs=182.7

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      .++|.+.+.||+|+||+||+|+++ .+++.||+|++.                 ++++.++|||||++++++.+++.+|+
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~-~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLAREL-ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccccEEEEEEecccCeEEEEEEEC-CCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            457999999999999999999986 688999999874                 27889999999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc-c
Q 042690           86 VYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT-Q  153 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~-~  153 (266)
                      |||||++|+|.+++...+.++      +..++..++.++|.++++|+     |||++.+|.+||+|||+|+....... .
T Consensus       110 vmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~  189 (311)
T 4aw0_A          110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA  189 (311)
T ss_dssp             EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred             EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcc
Confidence            999999999999998776654      55677778899998888888     99999999999999999998653322 2


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhh
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl  218 (266)
                      ......||+.|||||++.+..++.++||||+||++|+|+||+.||...               .+...+..+.+++.+||
T Consensus       190 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~lL  269 (311)
T 4aw0_A          190 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLL  269 (311)
T ss_dssp             CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHS
T ss_pred             cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHHHHHc
Confidence            344578999999999999989999999999999999999999999762               24456678889999999


Q ss_pred             hcCCCCCCCHHHHH
Q 042690          219 KEKPPLRPSLRIVA  232 (266)
Q Consensus       219 ~~~p~~Rps~~~il  232 (266)
                      +.||.+|||++|++
T Consensus       270 ~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          270 VLDATKRLGCEEME  283 (311)
T ss_dssp             CSSGGGSTTSGGGT
T ss_pred             cCCHhHCcChHHHc
Confidence            99999999998864


No 9  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=7.9e-48  Score=334.36  Aligned_cols=208  Identities=16%  Similarity=0.199  Sum_probs=180.7

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEc
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKF   89 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   89 (266)
                      +.|.++++||+|+||.||+|.++ .+++.||||++.              .+|+.++|||||++++++.+++.+||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~-~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HhcEeeeEeccCcCcEEEEEEEC-CCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            46999999999999999999986 678999999874              488999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCC-----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccccccc
Q 042690           90 MHNRSISSLLYECLR-----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTLTGMR  159 (266)
Q Consensus        90 ~~~~~L~~~l~~~~~-----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~  159 (266)
                      |++|+|.+++....-     ..+..++..++.++|.++++|+     |||++.+|.+||+|||+|+.... .........
T Consensus       230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~-~~~~~~~~~  308 (423)
T 4fie_A          230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKSLV  308 (423)
T ss_dssp             CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS-SCCCBCCCE
T ss_pred             CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCC-CCccccccc
Confidence            999999999975322     3355677788899999998888     99999999999999999987643 223344578


Q ss_pred             CCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------CccccchHHHHHHHhhhcC
Q 042690          160 ETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLEKPVMIAIQFVKEK  221 (266)
Q Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~~~~~l~~~cl~~~  221 (266)
                      ||+.|||||++.+..|+.++|||||||++|||++|+.||.+..                  ....+..+.+++.+||+.|
T Consensus       309 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~d  388 (423)
T 4fie_A          309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRD  388 (423)
T ss_dssp             ECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSS
T ss_pred             cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999997621                  2345677889999999999


Q ss_pred             CCCCCCHHHHHH
Q 042690          222 PPLRPSLRIVAL  233 (266)
Q Consensus       222 p~~Rps~~~il~  233 (266)
                      |.+|||++|+++
T Consensus       389 P~~R~ta~ell~  400 (423)
T 4fie_A          389 PAQRATAAELLK  400 (423)
T ss_dssp             TTTSCCHHHHTT
T ss_pred             hhHCcCHHHHhc
Confidence            999999999875


No 10 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2e-47  Score=315.38  Aligned_cols=207  Identities=16%  Similarity=0.235  Sum_probs=166.3

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      +++|++.+.||+|+||+||+|.++ .+++.||+|.+.                 .+++.++|||||++++++.+++.+|+
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~-~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i   90 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHT-TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM   90 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECT-TTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEEC-CCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            568999999999999999999975 678999999763                 37889999999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           86 VYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      ||||| +|+|.+++.+.+.++      +..++..++.++|.++++|+     |||++.++.+||+|||+|+....  ...
T Consensus        91 vmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~--~~~  167 (275)
T 3hyh_A           91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNF  167 (275)
T ss_dssp             EEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred             EEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCC--CCc
Confidence            99999 679999998776654      55667777899999898888     99999999999999999987542  223


Q ss_pred             cccccCCCCcCCccccCCCCC-CcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhh
Q 042690          155 LTGMRETKGYLPPEWFRNMPV-TVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl  218 (266)
                      .....||+.|||||++.+..+ +.++||||+||++|+|+||+.||...               .+...+..+.+++.+||
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  247 (275)
T 3hyh_A          168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML  247 (275)
T ss_dssp             -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHS
T ss_pred             cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHc
Confidence            345679999999999988776 57899999999999999999999762               23445677889999999


Q ss_pred             hcCCCCCCCHHHHHH
Q 042690          219 KEKPPLRPSLRIVAL  233 (266)
Q Consensus       219 ~~~p~~Rps~~~il~  233 (266)
                      +.||.+|||++|+++
T Consensus       248 ~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          248 IVNPLNRISIHEIMQ  262 (275)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             cCChhHCcCHHHHHc
Confidence            999999999999986


No 11 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.3e-47  Score=320.75  Aligned_cols=205  Identities=19%  Similarity=0.187  Sum_probs=175.1

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcC--CCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAP--GDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~--~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .++|++++.||+|+||+||+|+...  .+++.||+|.+.                ++++.++|||||++++++.+++.+|
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~  102 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY  102 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence            3579999999999999999998742  357889999875                2677889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      +|||||++|+|.+++...+.++      +..++..++.++|.++++|+     |||++.+|.+||+|||+|+.... ...
T Consensus       103 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~-~~~  181 (304)
T 3ubd_A          103 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-HEK  181 (304)
T ss_dssp             EEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC------C
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccC-CCc
Confidence            9999999999999998776654      44667777899998888888     99999999999999999987542 223


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccC---------------CCCccccchHHHHHHHhh
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ---------------GSDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~---------------~~~~~~~~~~~~l~~~cl  218 (266)
                      ......||+.|||||++.+..++.++|||||||++|+|+||+.||..               ..+...++.+.+++.+||
T Consensus       182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  261 (304)
T 3ubd_A          182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF  261 (304)
T ss_dssp             CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHc
Confidence            33457799999999999999999999999999999999999999976               224456678889999999


Q ss_pred             hcCCCCCCCH
Q 042690          219 KEKPPLRPSL  228 (266)
Q Consensus       219 ~~~p~~Rps~  228 (266)
                      +.||.+|||+
T Consensus       262 ~~dP~~R~ta  271 (304)
T 3ubd_A          262 KRNPANRLGA  271 (304)
T ss_dssp             CSSGGGSTTC
T ss_pred             ccCHHHCCCC
Confidence            9999999985


No 12 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=4.2e-47  Score=316.02  Aligned_cols=203  Identities=20%  Similarity=0.289  Sum_probs=168.7

Q ss_pred             eeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEe----CCeEEE
Q 042690           26 IYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIE----QECRLL   85 (266)
Q Consensus        26 ~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~----~~~~~l   85 (266)
                      |++.++||+|+||+||+|.++ .++..||+|++.                ++++.++|||||++++++.+    +..+|+
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~-~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l  106 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEEC-CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence            366778999999999999986 678899998764                37889999999999999875    345899


Q ss_pred             EEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcC--cccc-----ceeecC-CCEEEEeecCcceeecccc
Q 042690           86 VYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTR--ALAC-----RILLHD-YFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~--~~h~-----nili~~-~~~~~l~Dfg~a~~~~~~~  151 (266)
                      |||||++|+|.+++.....++      +..++..++.++|.++  ++|+     |||++. +|.+||+|||+|+...   
T Consensus       107 vmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~---  183 (290)
T 3fpq_A          107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR---  183 (290)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC---
T ss_pred             EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC---
Confidence            999999999999998776654      4456677778888777  7777     999985 7999999999997543   


Q ss_pred             ccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------CccccchHHHH
Q 042690          152 TQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLEKPVMI  213 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~~~~~l  213 (266)
                      ........||+.|||||++.+ .++.++|||||||++|+|+||+.||.+..                  +...++.+.++
T Consensus       184 ~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  262 (290)
T 3fpq_A          184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI  262 (290)
T ss_dssp             TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHH
T ss_pred             CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHH
Confidence            223345679999999998875 69999999999999999999999997521                  11234567899


Q ss_pred             HHHhhhcCCCCCCCHHHHHH
Q 042690          214 AIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       214 ~~~cl~~~p~~Rps~~~il~  233 (266)
                      +.+||+.||.+|||++++++
T Consensus       263 i~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          263 IEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999875


No 13 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=6.5e-47  Score=323.34  Aligned_cols=221  Identities=21%  Similarity=0.223  Sum_probs=181.8

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcC----CCcceeeeeeHH---------------HHhhhcCC-CceeeeeeEEEeC-
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAP----GDKTNIGVKKLD---------------KVVHVAHH-KNLVCLLGYHIEQ-   80 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~----~~~~~vaiK~~~---------------~~l~~~~h-~~iv~~~~~~~~~-   80 (266)
                      ..++|++.+.||+|+||+||+|.+..    ...+.||+|.+.               ++++.++| ||||+++++|..+ 
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~  141 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG  141 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence            45789999999999999999999752    234678998764               26777765 9999999999764 


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhcC----------------CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCC
Q 042690           81 ECRLLVYKFMHNRSISSLLYECL----------------RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDY  133 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~----------------~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~  133 (266)
                      +.+++|||||++|+|.++++...                .++      +..++..++.++|.++++|+     |||++.+
T Consensus       142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~  221 (353)
T 4ase_A          142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK  221 (353)
T ss_dssp             SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCC
Confidence            56899999999999999997532                133      34566677788888888887     9999999


Q ss_pred             CEEEEeecCcceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccC-----------
Q 042690          134 FTVETSDLGLAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQ-----------  200 (266)
Q Consensus       134 ~~~~l~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~-----------  200 (266)
                      +.+||+|||+|+........ ......||+.|||||.+.+..++.++|||||||++|||+| |+.||.+           
T Consensus       222 ~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i  301 (353)
T 4ase_A          222 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL  301 (353)
T ss_dssp             GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH
T ss_pred             CCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999999876433332 2334568999999999999999999999999999999998 8999976           


Q ss_pred             ------CCCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          201 ------GSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       201 ------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                            ..+...+..+.+++.+||+.||.+|||+.+|++.|+.+.+.+
T Consensus       302 ~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~  349 (353)
T 4ase_A          302 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  349 (353)
T ss_dssp             HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence                  223445678889999999999999999999999999987643


No 14 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=2.5e-46  Score=314.60  Aligned_cols=214  Identities=17%  Similarity=0.163  Sum_probs=164.3

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH-------------HhhhcCCCceeeeeeEEEeCC----eEEEEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-------------VVHVAHHKNLVCLLGYHIEQE----CRLLVY   87 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~-------------~l~~~~h~~iv~~~~~~~~~~----~~~lv~   87 (266)
                      +|.+.++||+|+||+||+|.+   .++.||||++..             .+..++|||||++++++..++    .++|||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~---~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE---CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            688899999999999999997   578999998751             334678999999999997653    579999


Q ss_pred             EcCCCCCHHHHHhhcCCCCHH------HHHHHHHHHhhhc--------Ccccc-----ceeecCCCEEEEeecCcceeec
Q 042690           88 KFMHNRSISSLLYECLRPTWQ------QRMQDCIRDCWRT--------RALAC-----RILLHDYFTVETSDLGLAKLLM  148 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~~~------~~l~~~~~~~~~~--------~~~h~-----nili~~~~~~~l~Dfg~a~~~~  148 (266)
                      |||++|+|.++++.. .+++.      .++..++.++|+.        +++|+     |||++.++.+||+|||+|+...
T Consensus        81 Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  159 (303)
T 3hmm_A           81 DYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             ECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             cCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence            999999999999754 34444      3444455666643        45555     9999999999999999998765


Q ss_pred             ccccc---ccccccCCCCcCCccccCCC------CCCcccchhhHHHHHHHHHhCCCcccCCC-----------------
Q 042690          149 INQTQ---TLTGMRETKGYLPPEWFRNM------PVTVKVDVYSFGVMLLEIISCRCVERQGS-----------------  202 (266)
Q Consensus       149 ~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~i~~~l~tg~~p~~~~~-----------------  202 (266)
                      .....   ......||+.|||||++.+.      .++.++|||||||++|||+||.+|+....                 
T Consensus       160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~  239 (303)
T 3hmm_A          160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE  239 (303)
T ss_dssp             TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred             CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence            33222   22345799999999998754      36779999999999999999976553200                 


Q ss_pred             ---------------Cc-----cccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          203 ---------------DP-----KTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       203 ---------------~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                                     +.     +....+.+++.+||+.||.+|||+.+|++.|+.+.+..
T Consensus       240 ~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~  299 (303)
T 3hmm_A          240 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             HHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence                           00     11234678999999999999999999999999987653


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=1.2e-45  Score=309.35  Aligned_cols=206  Identities=16%  Similarity=0.241  Sum_probs=161.4

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCC-------
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQE-------   81 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~-------   81 (266)
                      ++|++++.||+|+||+||+|+++ .+++.||+|++.               ++++.++|||||++++++.+.+       
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~   83 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNK-VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP   83 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEET-TTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred             hhCEEeeEEecCCCeEEEEEEEC-CCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence            46899999999999999999986 678899999764               3788999999999999987544       


Q ss_pred             -----eEEEEEEcCCCCCHHHHHhhcCCC---------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecC
Q 042690           82 -----CRLLVYKFMHNRSISSLLYECLRP---------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLG  142 (266)
Q Consensus        82 -----~~~lv~e~~~~~~L~~~l~~~~~~---------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg  142 (266)
                           .+|+|||||++|+|.+++......         .+..++..++.++|.++++|+     |||++.+|.+||+|||
T Consensus        84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFG  163 (299)
T 4g31_A           84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG  163 (299)
T ss_dssp             ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred             cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCc
Confidence                 368999999999999999865432         255677888899999998887     9999999999999999


Q ss_pred             cceeecccccc-----------ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccC-----------
Q 042690          143 LAKLLMINQTQ-----------TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ-----------  200 (266)
Q Consensus       143 ~a~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~-----------  200 (266)
                      +|+........           ......||+.|||||++.+..++.++|||||||++|||++   ||..           
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~  240 (299)
T 4g31_A          164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDV  240 (299)
T ss_dssp             CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH
T ss_pred             cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHH
Confidence            99876432211           1233579999999999999999999999999999999997   5543           


Q ss_pred             ---CCCc---cccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          201 ---GSDP---KTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       201 ---~~~~---~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                         ..++   ...+...+++.+||+.||.+|||+.++++
T Consensus       241 ~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          241 RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               1111   12334567999999999999999999876


No 16 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=5.5e-43  Score=303.77  Aligned_cols=208  Identities=14%  Similarity=0.236  Sum_probs=173.0

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeC------C
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQ------E   81 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~------~   81 (266)
                      ++|.+++.||+|+||+||+|.++ .+++.||||++.                ++|+.++|||||++++++...      +
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~-~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRR-LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCeEEEEEEecccCeEEEEEEEC-CCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            36999999999999999999986 678999999874                388899999999999997643      5


Q ss_pred             eEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccc
Q 042690           82 CRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMIN  150 (266)
Q Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~  150 (266)
                      .+|+|||||+ |+|.+++...+.+.      +..++..++.++|.++++|+     |||++.+|.+||+|||+|+.....
T Consensus       133 ~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~  211 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS  211 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC---
T ss_pred             EEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccC
Confidence            6899999996 58999998776654      55677788899999999988     999999999999999999875422


Q ss_pred             ---cccccccccCCCCcCCccccCCC-CCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------------
Q 042690          151 ---QTQTLTGMRETKGYLPPEWFRNM-PVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------------  203 (266)
Q Consensus       151 ---~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------------  203 (266)
                         .........||+.|||||++.+. .++.++||||+||++|||++|++||.+...                       
T Consensus       212 ~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~  291 (398)
T 4b99_A          212 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG  291 (398)
T ss_dssp             ----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC---
T ss_pred             ccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhh
Confidence               12233457899999999998775 468999999999999999999999975211                       


Q ss_pred             -----------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 -----------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 -----------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                             +.......+++.+||..||.+|||++|+++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             --CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                                   123456788999999999999999999885


No 17 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=1.3e-42  Score=314.88  Aligned_cols=207  Identities=18%  Similarity=0.183  Sum_probs=177.7

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH--------------------HhhhcCCCceeeeeeEEEeCC
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK--------------------VVHVAHHKNLVCLLGYHIEQE   81 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~--------------------~l~~~~h~~iv~~~~~~~~~~   81 (266)
                      ++.+|.+++.||+|+||+||+|+++ .+++.||+|++.+                    +++.++|||||++++++.+.+
T Consensus       187 slddf~i~k~LG~G~fG~V~la~~~-~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~  265 (689)
T 3v5w_A          187 TMNDFSVHRIIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD  265 (689)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred             chHHeEEEEEEecccCeEEEEEEEC-CCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC
Confidence            4678999999999999999999986 7899999998741                    344668999999999999999


Q ss_pred             eEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccc
Q 042690           82 CRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMIN  150 (266)
Q Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~  150 (266)
                      .+|+|||||+||+|.+++...+.++      +..++..++.++|.++++|+     |||++.+|.+||+|||+|+.....
T Consensus       266 ~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~  345 (689)
T 3v5w_A          266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  345 (689)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence            9999999999999999998777654      45677778899999999988     999999999999999999876422


Q ss_pred             cccccccccCCCCcCCccccC-CCCCCcccchhhHHHHHHHHHhCCCcccC------------------CCCccccchHH
Q 042690          151 QTQTLTGMRETKGYLPPEWFR-NMPVTVKVDVYSFGVMLLEIISCRCVERQ------------------GSDPKTLEKPV  211 (266)
Q Consensus       151 ~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~i~~~l~tg~~p~~~------------------~~~~~~~~~~~  211 (266)
                         ......||+.|||||++. +..++.++|+|||||++|+|++|..||..                  ..+...+..+.
T Consensus       346 ---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~  422 (689)
T 3v5w_A          346 ---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR  422 (689)
T ss_dssp             ---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred             ---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHH
Confidence               234568999999999986 45799999999999999999999999965                  12344567788


Q ss_pred             HHHHHhhhcCCCCCCC-----HHHHH
Q 042690          212 MIAIQFVKEKPPLRPS-----LRIVA  232 (266)
Q Consensus       212 ~l~~~cl~~~p~~Rps-----~~~il  232 (266)
                      +++.+||+.||.+|++     ++||+
T Consensus       423 dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          423 SLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             HHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             HHHHHHccCCHhHCCCCCCCCHHHHh
Confidence            9999999999999998     57764


No 18 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=2.8e-42  Score=296.17  Aligned_cols=210  Identities=19%  Similarity=0.245  Sum_probs=169.4

Q ss_pred             CceeeeeccCCCcceEEEEEEEc--CCCcceeeeeeHH------------HHhhhc-CCCceeeeeeEEEeCCeEEEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLA--PGDKTNIGVKKLD------------KVVHVA-HHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~--~~~~~~vaiK~~~------------~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      ..|.+.+.||+|+||+||+|.++  ..+++.||+|.+.            ++++.+ +||||+++++++.+++.+|+|||
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE  100 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP  100 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence            36999999999999999999864  3467889999764            356666 69999999999999999999999


Q ss_pred             cCCCCCHHHHHhhcC---CCCHHHHHHHHHHHhhhcCcccc-----ceeecCC-CEEEEeecCcceeeccccc-------
Q 042690           89 FMHNRSISSLLYECL---RPTWQQRMQDCIRDCWRTRALAC-----RILLHDY-FTVETSDLGLAKLLMINQT-------  152 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~---~~~~~~~l~~~~~~~~~~~~~h~-----nili~~~-~~~~l~Dfg~a~~~~~~~~-------  152 (266)
                      |+++++|.+++....   ...+..++..++.++|.++++|+     |||++.+ +.+||+|||+|+.......       
T Consensus       101 ~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~  180 (361)
T 4f9c_A          101 YLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQ  180 (361)
T ss_dssp             CCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-
T ss_pred             CCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccc
Confidence            999999999996321   13456778888899998888888     9999877 8999999999986432111       


Q ss_pred             --------------------cccccccCCCCcCCccccCCCC-CCcccchhhHHHHHHHHHhCCCcccCCCC--------
Q 042690          153 --------------------QTLTGMRETKGYLPPEWFRNMP-VTVKVDVYSFGVMLLEIISCRCVERQGSD--------  203 (266)
Q Consensus       153 --------------------~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~i~~~l~tg~~p~~~~~~--------  203 (266)
                                          .......||+.|||||++.+.+ ++.++||||+||++|+|+||+.||..+..        
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I  260 (361)
T 4f9c_A          181 SEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQI  260 (361)
T ss_dssp             -------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence                                1123357999999999987754 89999999999999999999999854221        


Q ss_pred             --------------------------------------------------------------ccccchHHHHHHHhhhcC
Q 042690          204 --------------------------------------------------------------PKTLEKPVMIAIQFVKEK  221 (266)
Q Consensus       204 --------------------------------------------------------------~~~~~~~~~l~~~cl~~~  221 (266)
                                                                                    ...+....+++.+||+.|
T Consensus       261 ~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~d  340 (361)
T 4f9c_A          261 MTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLN  340 (361)
T ss_dssp             HHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSC
T ss_pred             HHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCC
Confidence                                                                          113345678999999999


Q ss_pred             CCCCCCHHHHHH
Q 042690          222 PPLRPSLRIVAL  233 (266)
Q Consensus       222 p~~Rps~~~il~  233 (266)
                      |.+|||++|+++
T Consensus       341 P~~R~ta~eaL~  352 (361)
T 4f9c_A          341 PASRITAEEALL  352 (361)
T ss_dssp             TTTSCCHHHHHT
T ss_pred             hhHCcCHHHHhc
Confidence            999999999874


No 19 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=4.6e-42  Score=311.17  Aligned_cols=208  Identities=16%  Similarity=0.180  Sum_probs=178.0

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      +.+|.+.+.||+|+||.||+|.++ .+++.||+|.+.              .+|+.++|||||++++++.+++.+|+|||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~-~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E  234 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTER-ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE  234 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEEC-CCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            357999999999999999999986 788899999764              37889999999999999999999999999


Q ss_pred             cCCCCCHHHHHhhc-CCC------CHHHHHHHHHHHhhhcCcccc-----ceeecCC--CEEEEeecCcceeeccccccc
Q 042690           89 FMHNRSISSLLYEC-LRP------TWQQRMQDCIRDCWRTRALAC-----RILLHDY--FTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        89 ~~~~~~L~~~l~~~-~~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~--~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      ||++|+|.+++... ..+      .+..++..++.++|.++++|+     |||++.+  +.+||+|||+|+.....  ..
T Consensus       235 ~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~--~~  312 (573)
T 3uto_A          235 FMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--QS  312 (573)
T ss_dssp             CCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--SE
T ss_pred             ecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC--Cc
Confidence            99999999999643 333      355677788899998888888     9999854  89999999999986532  23


Q ss_pred             cccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC---------------C----ccccchHHHHHH
Q 042690          155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------D----PKTLEKPVMIAI  215 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------~----~~~~~~~~~l~~  215 (266)
                      .....||+.|||||++.+.+++.++|||||||++|+|++|+.||.+..               +    ...+..+.+++.
T Consensus       313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~  392 (573)
T 3uto_A          313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR  392 (573)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHH
T ss_pred             eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHH
Confidence            344679999999999999999999999999999999999999997621               1    234567789999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q 042690          216 QFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       216 ~cl~~~p~~Rps~~~il~  233 (266)
                      +||+.||.+||++.|+++
T Consensus       393 ~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          393 KLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             TTSCSSGGGSCCHHHHHH
T ss_pred             HHccCChhHCcCHHHHhc
Confidence            999999999999999876


No 20 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=2.4e-40  Score=279.16  Aligned_cols=221  Identities=21%  Similarity=0.286  Sum_probs=173.7

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      ...+|.+.+.||+|+||.||+|.+   .+..||+|++.                ++++.++||||+++++++...+..++
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI  111 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE---TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred             ChhHceeeeEeecCCCeEEEEEEE---CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence            356899999999999999999987   57789998753                37888999999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhhcCC---CC------HHHHHHHHHHHhhhcC--cccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           86 VYKFMHNRSISSLLYECLR---PT------WQQRMQDCIRDCWRTR--ALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~---~~------~~~~l~~~~~~~~~~~--~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                      ||||+++++|.+++.....   +.      +..++..++.++|..+  ++|+     ||+++.++.++|+|||++.....
T Consensus       112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred             EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence            9999999999999976432   33      4456667778888888  7776     99999999999999999976432


Q ss_pred             ccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC-----------------CCccccchHHH
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG-----------------SDPKTLEKPVM  212 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~-----------------~~~~~~~~~~~  212 (266)
                       .........||+.|+|||++.+..++.++||||||+++|+|++|+.||...                 .+......+.+
T Consensus       192 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  270 (309)
T 3p86_A          192 -TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA  270 (309)
T ss_dssp             -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHH
T ss_pred             -cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHH
Confidence             222233466899999999999988999999999999999999999999752                 23345667889


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHHHHhCCCCCC
Q 042690          213 IAIQFVKEKPPLRPSLRIVALMLQSILEVPSPPC  246 (266)
Q Consensus       213 l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~~~~  246 (266)
                      ++.+||+.||.+||+++++++.|+.+.+...++.
T Consensus       271 li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~  304 (309)
T 3p86_A          271 IIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP  304 (309)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHC------
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999987655443


No 21 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=1.2e-39  Score=274.66  Aligned_cols=218  Identities=18%  Similarity=0.237  Sum_probs=182.0

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      .++|.+.+.||+|+||.||+|.+. .++..+|+|++.              ++++.++||||+++++++.+++..++|||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   87 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHR-ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE   87 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEEC-CCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence            468999999999999999999986 678889999653              37788999999999999999999999999


Q ss_pred             cCCCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc--
Q 042690           89 FMHNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT--  154 (266)
Q Consensus        89 ~~~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~--  154 (266)
                      |+++++|.+++... ..+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++..........  
T Consensus        88 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  167 (310)
T 3s95_A           88 YIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG  167 (310)
T ss_dssp             CCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred             ecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence            99999999999863 3343      44566677788888887776     9999999999999999998754322211  


Q ss_pred             -----------cccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------Ccc
Q 042690          155 -----------LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPK  205 (266)
Q Consensus       155 -----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~  205 (266)
                                 .....||+.|+|||++.+..++.++||||||+++|+|++|..|+....                  ++.
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (310)
T 3s95_A          168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPN  247 (310)
T ss_dssp             ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTT
T ss_pred             cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCCC
Confidence                       114568999999999999899999999999999999999998876521                  344


Q ss_pred             ccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          206 TLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       206 ~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      ....+.+++.+||+.||.+||+++++++.|+.+...
T Consensus       248 ~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~  283 (310)
T 3s95_A          248 CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH  283 (310)
T ss_dssp             CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            567889999999999999999999999999988654


No 22 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.6e-40  Score=280.52  Aligned_cols=211  Identities=13%  Similarity=0.154  Sum_probs=171.1

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      .++|.+.+.||+|+||+||+|.+. .++..||+|++.               ++++.++||||+++++++.+.+..++||
T Consensus         9 ~~~y~i~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~   87 (347)
T 3zgw_A            9 LKYYELHETIGTGGFAKVKLACHI-LTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL   87 (347)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEEEEEEcCCCeEEEEEEEC-CCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence            358999999999999999999976 678899999753               4788999999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccccc
Q 042690           88 KFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTLT  156 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~  156 (266)
                      ||+++++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.+||+|||++............
T Consensus        88 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~  167 (347)
T 3zgw_A           88 EYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ  167 (347)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC----------
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcccc
Confidence            9999999999998766654      44566677788888888877     999999999999999999875443333445


Q ss_pred             cccCCCCcCCccccCCCCC-CcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhhhc
Q 042690          157 GMRETKGYLPPEWFRNMPV-TVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFVKE  220 (266)
Q Consensus       157 ~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl~~  220 (266)
                      ...||+.|+|||++.+..+ +.++|||||||++|+|++|..||...               .+......+.+++.+||+.
T Consensus       168 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~  247 (347)
T 3zgw_A          168 TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQV  247 (347)
T ss_dssp             ----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             ccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccc
Confidence            5678999999999988775 88999999999999999999999762               2334566788899999999


Q ss_pred             CCCCCCCHHHHHHH
Q 042690          221 KPPLRPSLRIVALM  234 (266)
Q Consensus       221 ~p~~Rps~~~il~~  234 (266)
                      ||.+|||++++++.
T Consensus       248 dP~~Rps~~eil~h  261 (347)
T 3zgw_A          248 DPKKRISMKNLLNH  261 (347)
T ss_dssp             SGGGSCCHHHHHTC
T ss_pred             CHhHCcCHHHHhcC
Confidence            99999999999863


No 23 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=7.6e-40  Score=274.20  Aligned_cols=222  Identities=18%  Similarity=0.243  Sum_probs=180.5

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      ++|.+.+.||+|+||.||+|.+. .++..||+|.+.                 ..++.++||||+++++++..++..++|
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDT-ILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET-TTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEEC-CCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            47999999999999999999975 678889999752                 367788999999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           87 YKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      |||+++++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.++|+|||++...........
T Consensus        90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  169 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT  169 (294)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccccc
Confidence            99999999999998766554      44556666788888888877     99999999999999999987643333333


Q ss_pred             ccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC--------------------CccccchHHHHHH
Q 042690          156 TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS--------------------DPKTLEKPVMIAI  215 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~--------------------~~~~~~~~~~l~~  215 (266)
                      ....||+.|+|||++.+..++.++||||||+++|+|+||+.||....                    .+..+..+.+++.
T Consensus       170 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  249 (294)
T 4eqm_A          170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVIL  249 (294)
T ss_dssp             -----CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHH
T ss_pred             CccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHH
Confidence            44668999999999999889999999999999999999999997622                    2234567889999


Q ss_pred             HhhhcCCCCCC-CHHHHHHHHHHHHhCCCCCC
Q 042690          216 QFVKEKPPLRP-SLRIVALMLQSILEVPSPPC  246 (266)
Q Consensus       216 ~cl~~~p~~Rp-s~~~il~~l~~~~~~~~~~~  246 (266)
                      +||+.||.+|| ++.++.+.|+.+........
T Consensus       250 ~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~  281 (294)
T 4eqm_A          250 RATEKDKANRYKTIQEMKDDLSSVLHENRANE  281 (294)
T ss_dssp             HHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTC
T ss_pred             HHhcCCHhHccccHHHHHHHHHHHHhhccCCc
Confidence            99999999998 89999999998876655433


No 24 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=8e-40  Score=274.47  Aligned_cols=209  Identities=16%  Similarity=0.174  Sum_probs=176.8

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      ..+|.+.+.||+|+||+||+|.+. .++..||+|++.              .+++.++||||+++++++...+..++|||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDV-ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBT-TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEEC-CCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            457999999999999999999975 678899999763              37788999999999999999999999999


Q ss_pred             cCCCCCHHHHHhhcCC-----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccccccc
Q 042690           89 FMHNRSISSLLYECLR-----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTLTGM  158 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~~-----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~~~  158 (266)
                      |+++++|.+++.....     ..+..++..++.++|..+++|+     ||+++.++.++|+|||++...... .......
T Consensus        98 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~  176 (297)
T 3fxz_A           98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE-QSKRSTM  176 (297)
T ss_dssp             CCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST-TCCBCCC
T ss_pred             CCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc-ccccCCc
Confidence            9999999999976421     3345666777788888888877     999999999999999999876432 2233456


Q ss_pred             cCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------CccccchHHHHHHHhhhc
Q 042690          159 RETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLEKPVMIAIQFVKE  220 (266)
Q Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~~~~~l~~~cl~~  220 (266)
                      .||+.|+|||++.+..++.++||||||+++|+|++|+.||....                  +......+.+++.+||+.
T Consensus       177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  256 (297)
T 3fxz_A          177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEM  256 (297)
T ss_dssp             CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCS
T ss_pred             cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccC
Confidence            78999999999999899999999999999999999999996521                  233456678999999999


Q ss_pred             CCCCCCCHHHHHH
Q 042690          221 KPPLRPSLRIVAL  233 (266)
Q Consensus       221 ~p~~Rps~~~il~  233 (266)
                      ||.+||+++++++
T Consensus       257 dp~~Rps~~ell~  269 (297)
T 3fxz_A          257 DVEKRGSAKELLQ  269 (297)
T ss_dssp             STTTSCCHHHHTT
T ss_pred             ChhHCcCHHHHhh
Confidence            9999999999986


No 25 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.2e-39  Score=277.17  Aligned_cols=210  Identities=18%  Similarity=0.251  Sum_probs=178.9

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      .+++|.+.+.||+|+||.||+|.+. .+++.||+|++.                ++++.++||||+++++++.+.+..++
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   91 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHI-LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL   91 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence            4678999999999999999999985 678899999763                37788999999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           86 VYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      ||||+++++|.+++.....+.      +..++..++.++|..+++|+     ||+++.++.+||+|||++.....  ...
T Consensus        92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~--~~~  169 (328)
T 3fe3_A           92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV--GGK  169 (328)
T ss_dssp             EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS--SCG
T ss_pred             EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC--CCc
Confidence            999999999999998766654      44666777788888888887     99999999999999999976542  223


Q ss_pred             cccccCCCCcCCccccCCCCCC-cccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhh
Q 042690          155 LTGMRETKGYLPPEWFRNMPVT-VKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl  218 (266)
                      .....||+.|+|||.+.+..++ .++|||||||++|+|++|+.||...               .+......+.+++.+||
T Consensus       170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  249 (328)
T 3fe3_A          170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFL  249 (328)
T ss_dssp             GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHC
T ss_pred             cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHC
Confidence            3456789999999998887764 7899999999999999999999762               23345677889999999


Q ss_pred             hcCCCCCCCHHHHHHH
Q 042690          219 KEKPPLRPSLRIVALM  234 (266)
Q Consensus       219 ~~~p~~Rps~~~il~~  234 (266)
                      +.||.+|||++++++.
T Consensus       250 ~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          250 VLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             CSSTTTSCCHHHHTTC
T ss_pred             CCChhHCcCHHHHhcC
Confidence            9999999999999863


No 26 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=7.2e-39  Score=273.18  Aligned_cols=210  Identities=17%  Similarity=0.158  Sum_probs=178.4

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ++++|.+.+.||+|+||+||+|..+ .+++.||+|.+.                 .+++.++||||+++++++.+.+..+
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence            3568999999999999999999976 678899999764                 2677889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      +||||+++|+|.+++.....+.      +..++..++.++|.++++|+     ||+++.+|.+||+|||+++.... ...
T Consensus        82 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~-~~~  160 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS-DGA  160 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-TTC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhccc-CCC
Confidence            9999999999999998766554      34566677788888888887     89999999999999999986432 222


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhh
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl  218 (266)
                      ......||+.|+|||++.+..++.++|+||||+++|+|++|+.||...               .+......+.+++.+||
T Consensus       161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL  240 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL  240 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Confidence            334567899999999999989999999999999999999999999752               23345677889999999


Q ss_pred             hcCCCCCC-----CHHHHHH
Q 042690          219 KEKPPLRP-----SLRIVAL  233 (266)
Q Consensus       219 ~~~p~~Rp-----s~~~il~  233 (266)
                      +.||.+||     +++++++
T Consensus       241 ~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          241 KKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             CSSTTTSTTCSTTTHHHHHT
T ss_pred             hcCHHHhcCCCCCCHHHHHc
Confidence            99999999     8888864


No 27 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=4.4e-39  Score=277.99  Aligned_cols=218  Identities=19%  Similarity=0.244  Sum_probs=180.3

Q ss_pred             cCceeeeeccCCCcceEEEEEEEc------CCCcceeeeeeHH---------------HHhhhc-CCCceeeeeeEEEeC
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLA------PGDKTNIGVKKLD---------------KVVHVA-HHKNLVCLLGYHIEQ   80 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~~~vaiK~~~---------------~~l~~~-~h~~iv~~~~~~~~~   80 (266)
                      .++|.+.+.||+|+||.||+|.+.      ..++..||+|.+.               .+++.+ +||||+++++++...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            468999999999999999999873      1345679999764               267778 899999999999999


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhcCC----------------CC------HHHHHHHHHHHhhhcCcccc-----ceeecCC
Q 042690           81 ECRLLVYKFMHNRSISSLLYECLR----------------PT------WQQRMQDCIRDCWRTRALAC-----RILLHDY  133 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~----------------~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~  133 (266)
                      +..++||||+++|+|.+++.....                +.      +..++..++.++|.++++|+     ||+++.+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  239 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN  239 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC
Confidence            999999999999999999986431                22      45667777788888888877     9999999


Q ss_pred             CEEEEeecCcceeeccccc-cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------
Q 042690          134 FTVETSDLGLAKLLMINQT-QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------  201 (266)
Q Consensus       134 ~~~~l~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------  201 (266)
                      +.+||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|+|+| |..||...          
T Consensus       240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~  319 (370)
T 2psq_A          240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK  319 (370)
T ss_dssp             CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred             CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Confidence            9999999999986543222 12233456788999999988899999999999999999999 88888652          


Q ss_pred             ------CCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          202 ------SDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       202 ------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                            .+......+.+++.+||+.||.+||++.++++.|+.+..
T Consensus       320 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          320 EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                  223445578899999999999999999999999998865


No 28 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.3e-39  Score=267.64  Aligned_cols=218  Identities=22%  Similarity=0.281  Sum_probs=182.3

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      +.++|.+.+.||+|+||.||+|.+.  ++..||+|++.             ++++.++||||+++++++.+++..++|||
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   85 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET--TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             ChhhceeeheecCCCccEEEEEEec--CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence            4568999999999999999999985  57779999764             37889999999999999999999999999


Q ss_pred             cCCCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccccc
Q 042690           89 FMHNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTLT  156 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~  156 (266)
                      |+++++|.+++..... ++      +..++..++.++|..+++|+     ||+++.++.++|+|||++............
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  165 (269)
T 4hcu_A           86 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  165 (269)
T ss_dssp             CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             eCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence            9999999999975432 33      44556667788888888876     899999999999999999876433333334


Q ss_pred             cccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHHhhh
Q 042690          157 GMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQFVK  219 (266)
Q Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~cl~  219 (266)
                      ...++..|+|||.+.+..++.++|+||||+++|+|++ |+.||...                .+......+.+++.+||+
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  245 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWR  245 (269)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHcc
Confidence            4556788999999988889999999999999999999 88888652                123345678899999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhC
Q 042690          220 EKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       220 ~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      .||.+||+++++++.|+.+.+.
T Consensus       246 ~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          246 ERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCcccCcCHHHHHHHHHHHHHc
Confidence            9999999999999999998763


No 29 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=2.7e-39  Score=274.62  Aligned_cols=222  Identities=19%  Similarity=0.236  Sum_probs=179.5

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcC--CCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAP--GDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~--~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      .++|.+.+.||+|+||.||+|.+..  ..+..||+|.+.               .+++.++||||+++++++.+.+..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            4579999999999999999999852  134459999764               37778899999999999998889999


Q ss_pred             EEEcCCCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           86 VYKFMHNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      ||||+++++|.+++... ..+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++.........
T Consensus       128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  207 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA  207 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred             EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence            99999999999999754 3343      44556666688887777776     999999999999999999876432222


Q ss_pred             --ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccC----------------CCCccccchHHHHH
Q 042690          154 --TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQ----------------GSDPKTLEKPVMIA  214 (266)
Q Consensus       154 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~----------------~~~~~~~~~~~~l~  214 (266)
                        ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||..                ..+......+.+++
T Consensus       208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  287 (325)
T 3kul_A          208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLM  287 (325)
T ss_dssp             CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHH
Confidence              2223445778999999988889999999999999999999 9999865                22334567788999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHhCCCC
Q 042690          215 IQFVKEKPPLRPSLRIVALMLQSILEVPSP  244 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~~l~~~~~~~~~  244 (266)
                      .+||+.||.+||+++++++.|+.+...+..
T Consensus       288 ~~~l~~dp~~Rps~~eil~~L~~l~~~~~~  317 (325)
T 3kul_A          288 LDCWHKDRAQRPRFSQIVSVLDALIRSPES  317 (325)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred             HHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence            999999999999999999999999887654


No 30 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=3.1e-39  Score=273.80  Aligned_cols=216  Identities=18%  Similarity=0.215  Sum_probs=172.8

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCC----eEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQE----CRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~----~~~   84 (266)
                      +..+|.+.+.||+|+||+||+|.+   .++.||+|++.             .+++.++||||+++++++....    .++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   98 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQL---LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW   98 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             chhhchhhheecccCceEEEEEEE---CCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence            457899999999999999999997   47889999864             2467889999999999998743    479


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhc----------Ccccc-----ceeecCCCEEEEeecCc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRT----------RALAC-----RILLHDYFTVETSDLGL  143 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~----------~~~h~-----nili~~~~~~~l~Dfg~  143 (266)
                      +||||+++++|.+++... .++      +..++..++.++|..          +++|+     ||+++.++.+||+|||+
T Consensus        99 lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~  177 (322)
T 3soc_A           99 LITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL  177 (322)
T ss_dssp             EEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             EEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence            999999999999999753 333      445556666777766          66665     99999999999999999


Q ss_pred             ceeecccccc-ccccccCCCCcCCccccCCC-----CCCcccchhhHHHHHHHHHhCCCcccCCCCc-------------
Q 042690          144 AKLLMINQTQ-TLTGMRETKGYLPPEWFRNM-----PVTVKVDVYSFGVMLLEIISCRCVERQGSDP-------------  204 (266)
Q Consensus       144 a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~-----~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~-------------  204 (266)
                      +......... ......||+.|+|||++.+.     .++.++|||||||++|+|+||+.||......             
T Consensus       178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~  257 (322)
T 3soc_A          178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP  257 (322)
T ss_dssp             CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred             ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence            9876533222 23346789999999998763     4567889999999999999999988652110             


Q ss_pred             -------------------------cccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          205 -------------------------KTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       205 -------------------------~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                                               .....+.+++.+||+.||.+|||+.++++.|+.+.+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence                                     0112378899999999999999999999999998753


No 31 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=2.8e-39  Score=266.88  Aligned_cols=218  Identities=18%  Similarity=0.227  Sum_probs=181.3

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEc
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKF   89 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   89 (266)
                      .++|.+.+.||+|+||.||+|.+.  ++..||+|.+.             .+++.++||||+++++++.+++..++||||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK--GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             hhheeeeeeeccCCCceEEEEEec--CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            468999999999999999999885  66779999764             377889999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccccc
Q 042690           90 MHNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTLTG  157 (266)
Q Consensus        90 ~~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~~  157 (266)
                      +++++|.+++..... ++      +..++..++.++|..+++|+     ||+++.++.++|+|||++.............
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~  164 (268)
T 3sxs_A           85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG  164 (268)
T ss_dssp             CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred             cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence            999999999976432 33      44556666788887777776     8999999999999999998765443334444


Q ss_pred             ccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHHhhhc
Q 042690          158 MRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQFVKE  220 (266)
Q Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~cl~~  220 (266)
                      ..+++.|+|||.+.+..++.++||||||+++|+|+| |+.||...                .+......+.+++.+||+.
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  244 (268)
T 3sxs_A          165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHE  244 (268)
T ss_dssp             CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCS
T ss_pred             CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcCC
Confidence            556778999999988889999999999999999999 89898651                1233456788999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHhCC
Q 042690          221 KPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       221 ~p~~Rps~~~il~~l~~~~~~~  242 (266)
                      ||.+||++.++++.|+.+.+..
T Consensus       245 ~p~~Rps~~~ll~~L~~l~~~~  266 (268)
T 3sxs_A          245 LPEKRPTFQQLLSSIEPLREKD  266 (268)
T ss_dssp             SGGGSCCHHHHHHHHGGGCC--
T ss_pred             ChhhCcCHHHHHHHHHHhhhcc
Confidence            9999999999999999886643


No 32 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=2.7e-39  Score=280.02  Aligned_cols=218  Identities=18%  Similarity=0.191  Sum_probs=179.1

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      +.++|.+.+.||+|+||.||+|.+. .++..||+|.+.               ++++.++||||+++++++..++..++|
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  190 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLR-ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV  190 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEe-cCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence            4568999999999999999999986 578889999753               378889999999999999988899999


Q ss_pred             EEcCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           87 YKFMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      |||+++++|.+++.... .++      +..++..++.++|..+++|+     ||+++.++.+||+|||+++.........
T Consensus       191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~  270 (377)
T 3cbl_A          191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA  270 (377)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence            99999999999997543 233      44555666788888777776     9999999999999999998643221111


Q ss_pred             c-ccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHH
Q 042690          155 L-TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQ  216 (266)
Q Consensus       155 ~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~  216 (266)
                      . ....++..|+|||.+.+..++.++||||||+++|||+| |..||...                .+...+..+.+++.+
T Consensus       271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  350 (377)
T 3cbl_A          271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQ  350 (377)
T ss_dssp             CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence            1 12234678999999988889999999999999999998 88888651                223345678899999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          217 FVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       217 cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      ||+.||.+||+++++++.|+.+.+
T Consensus       351 cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          351 CWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HcCCCchhCcCHHHHHHHHHHHHh
Confidence            999999999999999999998865


No 33 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=7.4e-39  Score=266.35  Aligned_cols=219  Identities=22%  Similarity=0.282  Sum_probs=179.8

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      -+..+|.+.+.||+|+||.||++.+.  ++..||+|++.             ++++.++||||+++++++.+.+..++||
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   98 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT   98 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEET--TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEc--CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence            34568999999999999999999985  67789999765             3788899999999999999999999999


Q ss_pred             EcCCCCCHHHHHhh-cCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           88 KFMHNRSISSLLYE-CLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        88 e~~~~~~L~~~l~~-~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      ||+++++|.+++.. ...++      +..++..++.++|..+++|+     ||+++.++.++|+|||++...........
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  178 (283)
T 3gen_A           99 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS  178 (283)
T ss_dssp             CCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred             eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence            99999999999976 23333      44556667788888888776     89999999999999999987643333333


Q ss_pred             ccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccC----------------CCCccccchHHHHHHHhh
Q 042690          156 TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQ----------------GSDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~----------------~~~~~~~~~~~~l~~~cl  218 (266)
                      ....+++.|+|||.+.+..++.++||||||+++|+|+| |+.||..                ..+......+.+++.+||
T Consensus       179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  258 (283)
T 3gen_A          179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCW  258 (283)
T ss_dssp             TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTT
T ss_pred             cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHc
Confidence            44556788999999988889999999999999999998 9989865                123334567889999999


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHhC
Q 042690          219 KEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       219 ~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      +.||.+||+++++++.|+.+.+.
T Consensus       259 ~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          259 HEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCChhHCcCHHHHHHHHHHHhhc
Confidence            99999999999999999988653


No 34 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=6.3e-39  Score=268.41  Aligned_cols=225  Identities=22%  Similarity=0.296  Sum_probs=176.9

Q ss_pred             CchhhhhhHhcccCceeeeeccCCCcceEEEEEEE---cCCCcceeeeeeHH--------------HHhhhcCCCceeee
Q 042690           11 DPSQYENRVFGSFSHIYSLKKPCGGSFSTVYTGVL---APGDKTNIGVKKLD--------------KVVHVAHHKNLVCL   73 (266)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~---~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~   73 (266)
                      +|..+..      .+|++.+.||+|+||.||+|.+   ...++..||+|++.              .+++.++||||+++
T Consensus         3 ~~~~~~~------~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   76 (295)
T 3ugc_A            3 DPTQFEE------RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY   76 (295)
T ss_dssp             ---CCCG------GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CcCcCCH------HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            4555555      5899999999999999999985   23578899999754              37888999999999


Q ss_pred             eeEEEeC--CeEEEEEEcCCCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEe
Q 042690           74 LGYHIEQ--ECRLLVYKFMHNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETS  139 (266)
Q Consensus        74 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~  139 (266)
                      ++++...  ...++||||+++++|.+++..... ++      +..++..++.++|..+++|+     ||+++.++.++|+
T Consensus        77 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~  156 (295)
T 3ugc_A           77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG  156 (295)
T ss_dssp             EEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC
T ss_pred             EEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEc
Confidence            9998653  458999999999999999976432 33      45566777788888888877     9999999999999


Q ss_pred             ecCcceeeccccc--cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccC-----------------
Q 042690          140 DLGLAKLLMINQT--QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ-----------------  200 (266)
Q Consensus       140 Dfg~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~-----------------  200 (266)
                      |||++........  .......++..|+|||.+.+..++.++||||||+++|+|+||..|+..                 
T Consensus       157 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~  236 (295)
T 3ugc_A          157 DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM  236 (295)
T ss_dssp             CCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHH
T ss_pred             cCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccch
Confidence            9999987643222  122234467789999999888899999999999999999999877643                 


Q ss_pred             ---------------CCCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          201 ---------------GSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       201 ---------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                                     ..+...+..+.+++.+||+.||.+||++.++++.|+.+.+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence                           11334556788999999999999999999999999998753


No 35 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=3.4e-38  Score=267.06  Aligned_cols=207  Identities=17%  Similarity=0.208  Sum_probs=177.1

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      +.++|.+.+.||+|+||.||+|..+ .+++.||+|.+.                 .+++.++||||+++++++.+....+
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~   82 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF   82 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEE
Confidence            3568999999999999999999986 678899999764                 2667889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      +||||+++++|.+++.....+.      +..++..++.++|.++++|+     ||+++.+|.+||+|||+++....    
T Consensus        83 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~----  158 (318)
T 1fot_A           83 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----  158 (318)
T ss_dssp             EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS----
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC----
Confidence            9999999999999998766554      44566677788888888887     89999999999999999987532    


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhh
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl  218 (266)
                      ......||+.|+|||++.+..++.++|+||||+++|+|++|..||...               .++.....+.+++.+||
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL  238 (318)
T 1fot_A          159 VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLI  238 (318)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHh
Confidence            223456899999999999989999999999999999999999999652               23445667889999999


Q ss_pred             hcCCCCCC-----CHHHHHH
Q 042690          219 KEKPPLRP-----SLRIVAL  233 (266)
Q Consensus       219 ~~~p~~Rp-----s~~~il~  233 (266)
                      +.||.+||     +++++++
T Consensus       239 ~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          239 TRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             CSCTTTCTTSSTTTTHHHHT
T ss_pred             ccCHHHcCCCcCCCHHHHhc
Confidence            99999999     8888863


No 36 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=3.1e-38  Score=274.35  Aligned_cols=205  Identities=17%  Similarity=0.207  Sum_probs=172.6

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH-----------------Hhhhc-CCCceeeeeeEEEeCCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-----------------VVHVA-HHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~-----------------~l~~~-~h~~iv~~~~~~~~~~~~   83 (266)
                      ++.+|.+++.||+|+||+||+|+++ .+++.||+|++.+                 +++.+ +||||+++++++.+.+..
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~  128 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL  128 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence            4678999999999999999999986 6788899998752                 44444 899999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      ++||||+++|+|.+++.....+.      +..++..++.++|..+++|+     |||++.+|.+||+|||+++.... ..
T Consensus       129 ~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~-~~  207 (396)
T 4dc2_A          129 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PG  207 (396)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC-TT
T ss_pred             EEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc-CC
Confidence            99999999999999998766654      44556677788888888887     99999999999999999986332 22


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccC------------------------CCCccccc
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ------------------------GSDPKTLE  208 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~------------------------~~~~~~~~  208 (266)
                      .......||+.|+|||++.+..++.++|+|||||++|+|++|+.||..                        ..+.....
T Consensus       208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~  287 (396)
T 4dc2_A          208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV  287 (396)
T ss_dssp             CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSCH
T ss_pred             CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCCH
Confidence            334456799999999999999999999999999999999999999953                        12334556


Q ss_pred             hHHHHHHHhhhcCCCCCCCH
Q 042690          209 KPVMIAIQFVKEKPPLRPSL  228 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~  228 (266)
                      .+.+++.+||+.||.+||++
T Consensus       288 ~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          288 KAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHHHHHHHHTCSCTTTSTTC
T ss_pred             HHHHHHHHHhcCCHhHcCCC
Confidence            77899999999999999985


No 37 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=2.3e-38  Score=274.26  Aligned_cols=210  Identities=21%  Similarity=0.230  Sum_probs=176.9

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      -++++|.+.+.||+|+||.||++.+. .++..||+|.+.                 .+++.++||||+++++++.+.+..
T Consensus        12 v~~~~y~i~~~LG~G~fG~V~~~~~~-~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~   90 (384)
T 4fr4_A           12 VNFDHFEILRAIGKGSFGKVCIVQKN-DTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM   90 (384)
T ss_dssp             CCGGGEEEEEEEECCTTCCEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            35679999999999999999999976 678889999653                 377889999999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      ++||||+.+|+|.+++.....+.      +..++..++.++|..+++|+     ||+++.+|.++|+|||++.....  .
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~--~  168 (384)
T 4fr4_A           91 FMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--E  168 (384)
T ss_dssp             EEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT--T
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccC--C
Confidence            99999999999999998766554      44566677788888888887     99999999999999999987542  2


Q ss_pred             cccccccCCCCcCCccccCC---CCCCcccchhhHHHHHHHHHhCCCcccCC------------------CCccccchHH
Q 042690          153 QTLTGMRETKGYLPPEWFRN---MPVTVKVDVYSFGVMLLEIISCRCVERQG------------------SDPKTLEKPV  211 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~i~~~l~tg~~p~~~~------------------~~~~~~~~~~  211 (266)
                      .......||+.|+|||++.+   ..++.++|+|||||++|+|++|+.||...                  .+......+.
T Consensus       169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~  248 (384)
T 4fr4_A          169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMV  248 (384)
T ss_dssp             CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred             CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHH
Confidence            33445679999999998863   45889999999999999999999999641                  2334567788


Q ss_pred             HHHHHhhhcCCCCCCC-HHHHHH
Q 042690          212 MIAIQFVKEKPPLRPS-LRIVAL  233 (266)
Q Consensus       212 ~l~~~cl~~~p~~Rps-~~~il~  233 (266)
                      +++.+||+.||.+||+ ++++++
T Consensus       249 ~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          249 SLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             HHHHHHhcCCHhHhcccHHHHHc
Confidence            9999999999999998 666653


No 38 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=1.1e-38  Score=271.79  Aligned_cols=209  Identities=17%  Similarity=0.217  Sum_probs=175.6

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .+++|.+.+.||+|+||.||+|.+. .+++.||+|.+.                 .+++.++||||+++++++.+.+..+
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   85 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHY-KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIV   85 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            4678999999999999999999986 678899999653                 2677889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      +||||+ +|+|.+++.....++      +..++..++.++|..+++|+     ||+++.++.+||+|||++.....  ..
T Consensus        86 lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~--~~  162 (336)
T 3h4j_B           86 MVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD--GN  162 (336)
T ss_dssp             EEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT--SB
T ss_pred             EEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccC--Cc
Confidence            999999 679999998766654      44556667788887777776     99999999999999999986542  22


Q ss_pred             ccccccCCCCcCCccccCCCCC-CcccchhhHHHHHHHHHhCCCcccCCC---------------CccccchHHHHHHHh
Q 042690          154 TLTGMRETKGYLPPEWFRNMPV-TVKVDVYSFGVMLLEIISCRCVERQGS---------------DPKTLEKPVMIAIQF  217 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~i~~~l~tg~~p~~~~~---------------~~~~~~~~~~l~~~c  217 (266)
                      ......||+.|+|||++.+..+ ++++||||||+++|+|++|+.||....               +......+.+++.+|
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  242 (336)
T 3h4j_B          163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRM  242 (336)
T ss_dssp             TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHHTT
T ss_pred             ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHHHH
Confidence            3345678999999999988775 689999999999999999999997622               233556788999999


Q ss_pred             hhcCCCCCCCHHHHHHH
Q 042690          218 VKEKPPLRPSLRIVALM  234 (266)
Q Consensus       218 l~~~p~~Rps~~~il~~  234 (266)
                      |+.||.+|||++++++.
T Consensus       243 L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          243 IVADPMQRITIQEIRRD  259 (336)
T ss_dssp             SCSSGGGSCCHHHHTTC
T ss_pred             cCCChhHCcCHHHHHhC
Confidence            99999999999999853


No 39 
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=6.2e-38  Score=264.34  Aligned_cols=224  Identities=13%  Similarity=0.110  Sum_probs=172.1

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .+++|.+.+.||+|+||.||+|.+. .++..||+|.+.                 .+++.++||||+++++++..++..+
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  110 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDT-VRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY  110 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEET-TTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEc-CCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence            4678999999999999999999975 578889999764                 2677889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      +||||+++++|.+++.....+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++.........
T Consensus       111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  190 (309)
T 2h34_A          111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT  190 (309)
T ss_dssp             EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred             EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccc
Confidence            9999999999999998765544      44556666688888887776     899999999999999999876533333


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC------------------CCccccchHHHHHH
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG------------------SDPKTLEKPVMIAI  215 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~------------------~~~~~~~~~~~l~~  215 (266)
                      ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||...                  ..+.....+.+++.
T Consensus       191 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  270 (309)
T 2h34_A          191 QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIA  270 (309)
T ss_dssp             ------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHH
T ss_pred             cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHH
Confidence            334566899999999999888999999999999999999999998652                  12345667889999


Q ss_pred             HhhhcCCCCCC-CHHHHHHHHHHHHhCCCCCC
Q 042690          216 QFVKEKPPLRP-SLRIVALMLQSILEVPSPPC  246 (266)
Q Consensus       216 ~cl~~~p~~Rp-s~~~il~~l~~~~~~~~~~~  246 (266)
                      +||+.||.+|| +++++++.|+..........
T Consensus       271 ~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~~  302 (309)
T 2h34_A          271 RGMAKNPEDRYVTCGDLSAAAHAALATADQDR  302 (309)
T ss_dssp             HHTCSSGGGSCSSHHHHHHHHHHTCC------
T ss_pred             HhccCCHHHHHHhHHHHHHHHHHHHHhhcccc
Confidence            99999999999 99999999999877655433


No 40 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=6.9e-39  Score=274.95  Aligned_cols=210  Identities=17%  Similarity=0.218  Sum_probs=171.7

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhc-CCCceeeeeeEEEeCCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVA-HHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~-~h~~iv~~~~~~~~~~~~   83 (266)
                      ++++|.+.+.||+|+||.||+|.++ .+++.||+|++.                 .+++.+ +||||+++++++.+.+..
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~   99 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVK-ETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL   99 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEc-CCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence            4678999999999999999999986 678899999764                 245555 699999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      ++||||+++|+|.+++.....+.      +..++..++.++|.++++|+     ||+++.+|.+||+|||+++.... ..
T Consensus       100 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~-~~  178 (353)
T 3txo_A          100 FFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC-NG  178 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeeccc-CC
Confidence            99999999999999998766654      44566677788888888887     99999999999999999986432 22


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC---------------CccccchHHHHHHHh
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------DPKTLEKPVMIAIQF  217 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------~~~~~~~~~~l~~~c  217 (266)
                      .......||+.|+|||++.+..++.++|+|||||++|+|++|+.||....               +......+.+++.+|
T Consensus       179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~l  258 (353)
T 3txo_A          179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSF  258 (353)
T ss_dssp             -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHH
T ss_pred             ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence            33345678999999999988889999999999999999999999997622               334566788999999


Q ss_pred             hhcCCCCCCCH------HHHHH
Q 042690          218 VKEKPPLRPSL------RIVAL  233 (266)
Q Consensus       218 l~~~p~~Rps~------~~il~  233 (266)
                      |+.||.+||++      +++++
T Consensus       259 L~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          259 MTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             TCSSGGGSTTSGGGTCTHHHHT
T ss_pred             hhhCHHHccCCcccCCHHHHhh
Confidence            99999999998      66653


No 41 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=4.2e-39  Score=273.19  Aligned_cols=217  Identities=29%  Similarity=0.413  Sum_probs=179.7

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      ..++|.+.+.||+|+||.||+|.+.  ++..||+|++.               ++++.++||||+++++++.+.+..++|
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv  105 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRLA--DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV  105 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECCS--SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEE
T ss_pred             HhhccccceeEecCCCcEEEEEEec--CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEE
Confidence            4567999999999999999999864  68889999764               367788999999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhcCC----CC------HHHHHHHHHHHhhhc---Ccccc-----ceeecCCCEEEEeecCcceeec
Q 042690           87 YKFMHNRSISSLLYECLR----PT------WQQRMQDCIRDCWRT---RALAC-----RILLHDYFTVETSDLGLAKLLM  148 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~----~~------~~~~l~~~~~~~~~~---~~~h~-----nili~~~~~~~l~Dfg~a~~~~  148 (266)
                      |||+.+++|.+++.....    +.      +..++..++.++|..   +++|+     ||+++.++.++|+|||++....
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  185 (326)
T 3uim_A          106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD  185 (326)
T ss_dssp             EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccC
Confidence            999999999999986432    33      345555666777777   77776     9999999999999999998765


Q ss_pred             cccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccC----------------------------
Q 042690          149 INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ----------------------------  200 (266)
Q Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~----------------------------  200 (266)
                      ...........||+.|+|||.+.+..++.++||||||+++|+|+||+.||..                            
T Consensus       186 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (326)
T 3uim_A          186 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALV  265 (326)
T ss_dssp             SSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSS
T ss_pred             cccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhc
Confidence            4444444456689999999999888899999999999999999999999841                            


Q ss_pred             ------CCCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          201 ------GSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       201 ------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                            .........+.+++.+||+.||.+|||++++++.|+....
T Consensus       266 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          266 DVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             CTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             ChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence                  0112234678899999999999999999999999987543


No 42 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=6.4e-39  Score=286.81  Aligned_cols=218  Identities=22%  Similarity=0.310  Sum_probs=182.5

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      ...+|.+.+.||+|+||.||+|.++ ..+..||+|.+.             .+++.++||||+++++++......++|||
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E  296 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE  296 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEG-GGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEc-CCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence            3457999999999999999999986 557889999875             37889999999999999999999999999


Q ss_pred             cCCCCCHHHHHhhcCC--CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           89 FMHNRSISSLLYECLR--PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~~--~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      |+.+|+|.+++.....  +.      +..++..++.++|.++++|+     |||++.++.+||+|||+++..........
T Consensus       297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  376 (495)
T 1opk_A          297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  376 (495)
T ss_dssp             CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred             ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence            9999999999986432  33      34566677788888888877     99999999999999999987653333333


Q ss_pred             ccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHHhh
Q 042690          156 TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~cl  218 (266)
                      ....++..|+|||.+.+..++.++||||||+++|+|+| |..||...                .+......+.+++.+||
T Consensus       377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  456 (495)
T 1opk_A          377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW  456 (495)
T ss_dssp             TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            34556788999999988889999999999999999999 88888652                23345567889999999


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHh
Q 042690          219 KEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       219 ~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      +.||.+||++.++++.|+.+..
T Consensus       457 ~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          457 QWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             CSSGGGSCCHHHHHHHHHTSCS
T ss_pred             CcChhHCcCHHHHHHHHHHHHh
Confidence            9999999999999999998754


No 43 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=1.6e-38  Score=271.76  Aligned_cols=210  Identities=18%  Similarity=0.237  Sum_probs=175.2

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH-----------------Hhhhc-CCCceeeeeeEEEeCCe
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-----------------VVHVA-HHKNLVCLLGYHIEQEC   82 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~-----------------~l~~~-~h~~iv~~~~~~~~~~~   82 (266)
                      -..++|.+.+.||+|+||.||+|.++ .+++.||+|++..                 +++.+ +||||+++++++.+.+.
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            35679999999999999999999986 6788999997642                 44444 89999999999999999


Q ss_pred             EEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           83 RLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      .++||||+++|+|.+++.....++      +..++..++.++|.++++|+     ||+++.+|.++|+|||+++..... 
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-  171 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-  171 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC-
Confidence            999999999999999998766554      44566677788888888887     899999999999999999864321 


Q ss_pred             ccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC---------------CccccchHHHHHHH
Q 042690          152 TQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------DPKTLEKPVMIAIQ  216 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------~~~~~~~~~~l~~~  216 (266)
                      ........||+.|+|||++.+..++.++|+|||||++|+|++|..||....               +......+.+++.+
T Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  251 (345)
T 1xjd_A          172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVK  251 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred             CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHHHHHHH
Confidence            223345678999999999999899999999999999999999999997522               23355678899999


Q ss_pred             hhhcCCCCCCCHH-HHH
Q 042690          217 FVKEKPPLRPSLR-IVA  232 (266)
Q Consensus       217 cl~~~p~~Rps~~-~il  232 (266)
                      ||+.||.+||++. +++
T Consensus       252 lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          252 LFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HSCSSGGGSBTTBSCGG
T ss_pred             HhcCCHhHcCCChHHHH
Confidence            9999999999987 554


No 44 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=2.3e-38  Score=276.40  Aligned_cols=211  Identities=14%  Similarity=0.146  Sum_probs=177.4

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ...+|.+.+.||+|+||.||+|.++ .++..||+|++.                 .+++.++||||+++++++.+....+
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~  145 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHK-STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY  145 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CccccEEEEEEEcCCCEEEEEEEEC-CCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence            4568999999999999999999986 678899999763                 3777889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCC-----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           85 LVYKFMHNRSISSLLYECLR-----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~-----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      +||||+++|+|.+++....-     ..+..++..++.++|.++++|+     ||+++.+|.+||+|||+++.........
T Consensus       146 lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~  225 (410)
T 3v8s_A          146 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR  225 (410)
T ss_dssp             EEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE
T ss_pred             EEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc
Confidence            99999999999999975321     2345667777788888888887     9999999999999999998765433334


Q ss_pred             cccccCCCCcCCccccCCCC----CCcccchhhHHHHHHHHHhCCCcccCCC-------------------CccccchHH
Q 042690          155 LTGMRETKGYLPPEWFRNMP----VTVKVDVYSFGVMLLEIISCRCVERQGS-------------------DPKTLEKPV  211 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~----~~~~~Di~slG~i~~~l~tg~~p~~~~~-------------------~~~~~~~~~  211 (266)
                      .....||+.|+|||++.+..    ++.++|+||||+++|+|++|+.||....                   .......+.
T Consensus       226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~  305 (410)
T 3v8s_A          226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAK  305 (410)
T ss_dssp             CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHH
T ss_pred             ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHH
Confidence            44677999999999887655    7889999999999999999999997521                   124567788


Q ss_pred             HHHHHhhhcCCCC--CCCHHHHHH
Q 042690          212 MIAIQFVKEKPPL--RPSLRIVAL  233 (266)
Q Consensus       212 ~l~~~cl~~~p~~--Rps~~~il~  233 (266)
                      +++.+||+.+|.+  ||+++|+++
T Consensus       306 ~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          306 NLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             HHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             HHHHHHccChhhhCCCCCHHHHhc
Confidence            9999999988888  999999975


No 45 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=1.1e-38  Score=282.56  Aligned_cols=219  Identities=21%  Similarity=0.306  Sum_probs=181.1

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      ..++|.+.+.||+|+||.||+|.+.  .+..||+|.+.             .+++.++||||+++++++. .+..++|||
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e  262 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYN--KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE  262 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEET--TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred             chHHeEEEEEcccCCceEEEEEEEC--CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence            4567999999999999999999985  57789999765             3788999999999999986 567899999


Q ss_pred             cCCCCCHHHHHhhcC--CC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           89 FMHNRSISSLLYECL--RP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~--~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      |+.+|+|.+++....  .+      .+..++..++.++|..+++|+     |||++.++.+||+|||+++..........
T Consensus       263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~  342 (454)
T 1qcf_A          263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR  342 (454)
T ss_dssp             CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred             ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence            999999999997432  23      345667777788888888887     99999999999999999987543222223


Q ss_pred             ccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHHhh
Q 042690          156 TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~cl  218 (266)
                      ....++..|+|||.+.+..++.++||||||+++|||+| |+.||...                .+...+..+.+++.+||
T Consensus       343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  422 (454)
T 1qcf_A          343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCW  422 (454)
T ss_dssp             CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            34456788999999988889999999999999999999 99998651                23345677889999999


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          219 KEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       219 ~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                      +.||.+||++++|++.|+.+.....
T Consensus       423 ~~dp~~RPt~~~i~~~L~~~~~~~~  447 (454)
T 1qcf_A          423 KNRPEERPTFEYIQSVLDDFYTATE  447 (454)
T ss_dssp             CSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred             cCChhHCcCHHHHHHHHHHHHhccc
Confidence            9999999999999999998865443


No 46 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=4.7e-38  Score=271.56  Aligned_cols=207  Identities=18%  Similarity=0.161  Sum_probs=175.0

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH------------------HhhhcCCCceeeeeeEEEeCCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK------------------VVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~------------------~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      ..++|.+.+.||+|+||.||+|.++ .++..||+|++.+                  +++.++||||+++++++.+.+..
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHK-AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEET-TTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEc-CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence            4568999999999999999999986 6788899998742                  24567899999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      |+||||+++|+|.+++.....+.      +..++..++.++|.++++|+     ||+++.+|.+||+|||+++.... ..
T Consensus       115 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~-~~  193 (373)
T 2r5t_A          115 YFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE-HN  193 (373)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC-CC
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc-CC
Confidence            99999999999999998766544      44566677788888888887     99999999999999999976432 22


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHh
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQF  217 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~c  217 (266)
                      .......||+.|+|||++.+..++.++|+|||||++|+|++|..||...               .++.....+.+++.+|
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~l  273 (373)
T 2r5t_A          194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGL  273 (373)
T ss_dssp             CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHHHHHH
T ss_pred             CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Confidence            2334567899999999999989999999999999999999999999752               2345567788999999


Q ss_pred             hhcCCCCCCCHHH
Q 042690          218 VKEKPPLRPSLRI  230 (266)
Q Consensus       218 l~~~p~~Rps~~~  230 (266)
                      |+.||.+||++.+
T Consensus       274 L~~dp~~R~~~~~  286 (373)
T 2r5t_A          274 LQKDRTKRLGAKD  286 (373)
T ss_dssp             TCSSGGGSTTTTT
T ss_pred             cccCHHhCCCCCC
Confidence            9999999999753


No 47 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=6.3e-38  Score=276.42  Aligned_cols=209  Identities=18%  Similarity=0.205  Sum_probs=174.6

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      ++|.+.+.||+|+||.||++.+. .++..+|+|.+.                .+++.++||||+++++++.+++..++||
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~-~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKV-LAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEET-TTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             CCeEEEEEeccCCCeEEEEEEEC-CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            37999999999999999999976 678889998653                3788999999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeec---CCCEEEEeecCcceeecccccc
Q 042690           88 KFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLH---DYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~---~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      ||+.+|+|.+++.....++      +..++..++.++|..+++|+     ||+++   .++.+||+|||++...... ..
T Consensus        90 E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~-~~  168 (444)
T 3soa_A           90 DLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE-QQ  168 (444)
T ss_dssp             CCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT-CC
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC-Cc
Confidence            9999999999998766544      44666677788888888877     89998   4678999999999875422 22


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC-------------------CccccchHHHHH
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS-------------------DPKTLEKPVMIA  214 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-------------------~~~~~~~~~~l~  214 (266)
                      ......||+.|+|||++.+..++.++||||||+++|+|++|..||....                   .......+.+++
T Consensus       169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  248 (444)
T 3soa_A          169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI  248 (444)
T ss_dssp             BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHH
T ss_pred             eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHH
Confidence            3345678999999999998899999999999999999999999986521                   123567788999


Q ss_pred             HHhhhcCCCCCCCHHHHHHH
Q 042690          215 IQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~~  234 (266)
                      .+||+.||.+||++.++++.
T Consensus       249 ~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          249 NKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             HHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHcCCChhHCCCHHHHhcC
Confidence            99999999999999999863


No 48 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=1.7e-38  Score=269.42  Aligned_cols=211  Identities=19%  Similarity=0.244  Sum_probs=176.2

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      +++|.+.+.||+|+||.||+|.+. .++..||+|.+.               .+++.++||||+++++++.+++..++||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   84 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEEC-CCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            468999999999999999999986 678889999753               3778899999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc-cccc
Q 042690           88 KFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ-TQTL  155 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~-~~~~  155 (266)
                      ||+++++|.+++.....+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++....... ....
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~  164 (323)
T 3tki_A           85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL  164 (323)
T ss_dssp             ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred             EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence            9999999999998665544      44566667788888887776     9999999999999999998754322 2233


Q ss_pred             ccccCCCCcCCccccCCCCC-CcccchhhHHHHHHHHHhCCCcccCCCC------------------ccccchHHHHHHH
Q 042690          156 TGMRETKGYLPPEWFRNMPV-TVKVDVYSFGVMLLEIISCRCVERQGSD------------------PKTLEKPVMIAIQ  216 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~i~~~l~tg~~p~~~~~~------------------~~~~~~~~~l~~~  216 (266)
                      ....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||.....                  ......+.+++.+
T Consensus       165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (323)
T 3tki_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  244 (323)
T ss_dssp             CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHH
Confidence            45678999999999887665 7789999999999999999999975221                  2345677889999


Q ss_pred             hhhcCCCCCCCHHHHHHH
Q 042690          217 FVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       217 cl~~~p~~Rps~~~il~~  234 (266)
                      ||+.||.+||+++|+++.
T Consensus       245 ~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          245 ILVENPSARITIPDIKKD  262 (323)
T ss_dssp             HSCSSTTTSCCHHHHTTC
T ss_pred             HccCChhhCcCHHHHhhC
Confidence            999999999999999863


No 49 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1.6e-37  Score=264.14  Aligned_cols=215  Identities=10%  Similarity=0.078  Sum_probs=178.6

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhc-CCCceeeeeeEEEeCCeEEEEEEcC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVA-HHKNLVCLLGYHIEQECRLLVYKFM   90 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~   90 (266)
                      .+|.+.+.||+|+||.||+|.+. .+++.||+|.+.            .+++.+ +||||+++++++.+....++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~   87 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNL-YTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL   87 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEET-TTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred             CCeEEEEEeeccCCceEEEEEEC-CCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence            47999999999999999999975 678899999764            477888 8999999999999999999999999


Q ss_pred             CCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCE-----EEEeecCcceeecccccc
Q 042690           91 HNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFT-----VETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        91 ~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~-----~~l~Dfg~a~~~~~~~~~  153 (266)
                       +++|.+++... ..++      +..++..++.++|..+++|+     ||+++.++.     ++|+|||++.........
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~  166 (330)
T 2izr_A           88 -GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK  166 (330)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTC
T ss_pred             -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCC
Confidence             88999999864 3343      44566667788888888877     899999887     999999999876433222


Q ss_pred             ------ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCCcc----------------------
Q 042690          154 ------TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPK----------------------  205 (266)
Q Consensus       154 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~~----------------------  205 (266)
                            ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.......                      
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  246 (330)
T 2izr_A          167 KHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE  246 (330)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTT
T ss_pred             ccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhc
Confidence                  1235678999999999999899999999999999999999999997632211                      


Q ss_pred             ccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          206 TLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       206 ~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      ..+.+.+++..||+.||.+||++++|.+.|+.+.+
T Consensus       247 ~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~  281 (330)
T 2izr_A          247 NFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD  281 (330)
T ss_dssp             TCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             cChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence            02278889999999999999999999999988754


No 50 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=4.4e-38  Score=267.02  Aligned_cols=218  Identities=18%  Similarity=0.222  Sum_probs=175.3

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcce----eeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTN----IGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~----vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      ..+|.+.+.||+|+||.||+|.+. .++..    +++|.+.               .+++.++||||+++++++. ++..
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~   89 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWI-PEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL   89 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEEC-CTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred             HhHceeeeeeeecCCceEEEEEEc-CCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence            358999999999999999999986 34443    6666543               3777889999999999886 4568


Q ss_pred             EEEEEcCCCCCHHHHHhhcC-C------CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           84 LLVYKFMHNRSISSLLYECL-R------PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~-~------~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      ++||||+.+++|.+++.... .      ..+..++..++.++|..+++|+     ||+++.++.++|+|||+++......
T Consensus        90 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           90 QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             EEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred             EEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence            89999999999999997542 2      3355667777888888888887     9999999999999999998764332


Q ss_pred             cc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCCC----------------CccccchHHHH
Q 042690          152 TQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQGS----------------DPKTLEKPVMI  213 (266)
Q Consensus       152 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~~----------------~~~~~~~~~~l  213 (266)
                      .. ......++..|+|||++.+..++.++||||||+++|+|+| |..||....                +......+.++
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  249 (325)
T 3kex_A          170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMV  249 (325)
T ss_dssp             TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHH
T ss_pred             ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHH
Confidence            22 2234567789999999988889999999999999999999 999997522                23345678889


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          214 AIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       214 ~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                      +.+||+.||.+||++.++++.|+.+...+
T Consensus       250 i~~~l~~dp~~Rps~~el~~~l~~~~~~~  278 (325)
T 3kex_A          250 MVKCWMIDENIRPTFKELANEFTRMARDP  278 (325)
T ss_dssp             HHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred             HHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            99999999999999999999999986543


No 51 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.6e-38  Score=260.74  Aligned_cols=218  Identities=22%  Similarity=0.269  Sum_probs=181.5

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      +.++|.+.+.||+|+||.||++.+.  ++..|++|.+.             ++++.++||||+++++++.+++..++|||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE   83 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred             chhheeeeeEecCCCceeEEEEEec--CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence            4578999999999999999999985  66789999765             37788899999999999999899999999


Q ss_pred             cCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccccc
Q 042690           89 FMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTLT  156 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~  156 (266)
                      |+++++|.+++.... .++      +..++..++..+|..+++|+     ||+++.++.++|+|||++............
T Consensus        84 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  163 (267)
T 3t9t_A           84 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  163 (267)
T ss_dssp             CCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence            999999999997643 233      34556666788888887776     899999999999999999865433223333


Q ss_pred             cccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHHhhh
Q 042690          157 GMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQFVK  219 (266)
Q Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~cl~  219 (266)
                      ...++..|+|||.+.+..++.++|+||||+++|+|++ |+.||...                .+......+.+++.+||+
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~  243 (267)
T 3t9t_A          164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWR  243 (267)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHcc
Confidence            4556788999999988889999999999999999999 88888652                123345678899999999


Q ss_pred             cCCCCCCCHHHHHHHHHHHHhC
Q 042690          220 EKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       220 ~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      .||.+||+++++++.|+.+.+.
T Consensus       244 ~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          244 ERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CChhhCcCHHHHHHHHHHHHhc
Confidence            9999999999999999998763


No 52 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=4.1e-38  Score=270.86  Aligned_cols=206  Identities=15%  Similarity=0.169  Sum_probs=174.2

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .|.+.+.||+|+||.||++.++ .++..||+|.+.                    .+++.++||||+++++++.+....+
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~-~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV   91 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             ceEEeeEEeeCcCEEEEEEEEC-CCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence            6999999999999999999986 678889998653                    3677889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCC----EEEEeecCcceeecc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYF----TVETSDLGLAKLLMI  149 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~----~~~l~Dfg~a~~~~~  149 (266)
                      +||||+++++|.+++.....++      +..++..++.++|..+++|+     ||+++.++    .++|+|||++.....
T Consensus        92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~  171 (361)
T 2yab_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED  171 (361)
T ss_dssp             EEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence            9999999999999998766544      44566667788888888877     89998877    799999999987643


Q ss_pred             ccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC---------------C----ccccchH
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------D----PKTLEKP  210 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------~----~~~~~~~  210 (266)
                        ........||+.|+|||++.+..++.++||||||+++|+|++|..||....               +    ......+
T Consensus       172 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  249 (361)
T 2yab_A          172 --GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELA  249 (361)
T ss_dssp             --TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHH
T ss_pred             --CCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHH
Confidence              223345678999999999998889999999999999999999999997522               1    1234567


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 042690          211 VMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       211 ~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      .+++.+||..||.+||++.++++
T Consensus       250 ~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          250 KDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHCCCChhHCcCHHHHhc
Confidence            88999999999999999999874


No 53 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=8.4e-38  Score=267.49  Aligned_cols=205  Identities=17%  Similarity=0.204  Sum_probs=171.9

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhc-CCCceeeeeeEEEeCCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVA-HHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~-~h~~iv~~~~~~~~~~~~   83 (266)
                      +.++|.+.+.||+|+||.||+|.++ .+++.||+|++.                 .+++.+ +||||+++++++.+.+..
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   85 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL   85 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             chhheEEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEE
Confidence            3568999999999999999999986 678899999864                 245555 799999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      ++||||+++++|.+++.....++      +..++..++.++|.++++|+     ||+++.+|.++|+|||+++.... ..
T Consensus        86 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~-~~  164 (345)
T 3a8x_A           86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PG  164 (345)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC-TT
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC-CC
Confidence            99999999999999998766554      44566677788888888887     99999999999999999986432 22


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccC------------------------CCCccccc
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ------------------------GSDPKTLE  208 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~------------------------~~~~~~~~  208 (266)
                      .......||+.|+|||++.+..++.++|+|||||++|+|++|+.||..                        ..+.....
T Consensus       165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s~  244 (345)
T 3a8x_A          165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV  244 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSCH
T ss_pred             CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCCH
Confidence            233456789999999999998999999999999999999999999953                        11233456


Q ss_pred             hHHHHHHHhhhcCCCCCCCH
Q 042690          209 KPVMIAIQFVKEKPPLRPSL  228 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~  228 (266)
                      .+.+++.+||+.||.+||++
T Consensus       245 ~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          245 KAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             HHHHHHHHHTCSSTTTSTTC
T ss_pred             HHHHHHHHHhcCCHhHCCCC
Confidence            77889999999999999995


No 54 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=3.8e-38  Score=261.96  Aligned_cols=218  Identities=17%  Similarity=0.179  Sum_probs=166.4

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcC--CCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAP--GDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~--~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ..++|.+.+.||+|+||.||+|.+..  ..+..+|+|...               ..++.++||||+++++++ .++..+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~   91 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVW   91 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccE
Confidence            34689999999999999999999752  235568998753               367788999999999997 456688


Q ss_pred             EEEEcCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           85 LVYKFMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      +||||+.+++|.+++.... .++      +..++..++.++|..+++|+     ||+++.++.++|+|||++........
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  171 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY  171 (281)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred             EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence            9999999999999997543 343      33556666788888888877     99999999999999999987653333


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHH
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAI  215 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~  215 (266)
                      .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||...                .++.....+.+++.
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~  251 (281)
T 1mp8_A          172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT  251 (281)
T ss_dssp             -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence            33334456788999999988889999999999999999997 88888652                22345567889999


Q ss_pred             HhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          216 QFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       216 ~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      +||+.||.+||++.++++.|+.+.+
T Consensus       252 ~~l~~~p~~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          252 KCWAYDPSRRPRFTELKAQLSTILE  276 (281)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHccCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999998865


No 55 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=6.1e-38  Score=263.08  Aligned_cols=216  Identities=17%  Similarity=0.238  Sum_probs=177.3

Q ss_pred             CceeeeeccCCCcceEEEEEEE---cCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeC--CeE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVL---APGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQ--ECR   83 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~---~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~--~~~   83 (266)
                      ..|++.+.||+|+||.||+|.+   ...++..||+|++.               .+++.++||||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            3699999999999999999995   23578899999764               377889999999999999876  568


Q ss_pred             EEEEEcCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           84 LLVYKFMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      ++||||+++++|.+++.... .++      +..++..++.++|..+++|+     ||+++.++.++|+|||++.......
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  180 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  180 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence            99999999999999996443 333      44566677788888887776     9999999999999999998765332


Q ss_pred             c--cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccC-----------------------------
Q 042690          152 T--QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ-----------------------------  200 (266)
Q Consensus       152 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~-----------------------------  200 (266)
                      .  .......+|..|+|||.+.+..++.++||||||+++|+|+||..|+..                             
T Consensus       181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (302)
T 4e5w_A          181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK  260 (302)
T ss_dssp             CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTC
T ss_pred             cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccC
Confidence            2  122345678889999999888889999999999999999999887543                             


Q ss_pred             --CCCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042690          201 --GSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSIL  239 (266)
Q Consensus       201 --~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~  239 (266)
                        ..++.....+.+++.+||+.||.+||++.++++.|+.+.
T Consensus       261 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          261 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence              123445677899999999999999999999999999875


No 56 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.2e-38  Score=268.56  Aligned_cols=208  Identities=13%  Similarity=0.172  Sum_probs=175.6

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEc
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKF   89 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   89 (266)
                      .++|.+.+.||+|+||.||++.+. .++..+|+|.+.             .+++.++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEEC-CCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            358999999999999999999976 678889998653             478899999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecC--CCEEEEeecCcceeecccccccc
Q 042690           90 MHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHD--YFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        90 ~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~--~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      +++++|.+++.... .++      +..++..++.++|.++++|+     ||+++.  ++.++|+|||++......  ...
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~--~~~  160 (321)
T 1tki_A           83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--DNF  160 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--CEE
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC--Ccc
Confidence            99999999997643 333      44666677788888888877     899987  789999999999876432  223


Q ss_pred             ccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------ccccchHHHHHHH
Q 042690          156 TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------PKTLEKPVMIAIQ  216 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------~~~~~~~~~l~~~  216 (266)
                      ....+|+.|+|||++.+..++.++||||||+++|+|++|..||.....                   +..+..+.+++.+
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  240 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR  240 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHT
T ss_pred             ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHH
Confidence            345689999999999888889999999999999999999999976221                   1345678899999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 042690          217 FVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       217 cl~~~p~~Rps~~~il~  233 (266)
                      ||..||.+|||+.++++
T Consensus       241 ~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          241 LLVKERKSRMTASEALQ  257 (321)
T ss_dssp             TSCSSGGGSCCHHHHHH
T ss_pred             HcCCChhHCcCHHHHhc
Confidence            99999999999999986


No 57 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=3.1e-38  Score=270.79  Aligned_cols=207  Identities=18%  Similarity=0.216  Sum_probs=172.3

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      .|.+.+.||+|+||.||+|.++ .+++.||+|.+.                   .+++.++||||+++++++.+++..++
T Consensus        25 ~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           25 VYELCEVIGKGPFSVVRRCINR-ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             ceEEeeEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            7999999999999999999976 678899999652                   36778899999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhhcC----CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCE---EEEeecCcceee
Q 042690           86 VYKFMHNRSISSLLYECL----RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFT---VETSDLGLAKLL  147 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~----~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~---~~l~Dfg~a~~~  147 (266)
                      ||||+++++|.+++....    .++      +..++..++.++|..+++|+     ||+++.++.   ++|+|||++...
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~  183 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL  183 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence            999999999998886431    222      44667777788888888887     899986654   999999999876


Q ss_pred             ccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC--------------C----ccccch
Q 042690          148 MINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS--------------D----PKTLEK  209 (266)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~--------------~----~~~~~~  209 (266)
                      ... ........||+.|+|||++.+..++.++|||||||++|+|++|..||....              .    ......
T Consensus       184 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  262 (351)
T 3c0i_A          184 GES-GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISES  262 (351)
T ss_dssp             CTT-SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCHHHHTTSCHH
T ss_pred             cCC-CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCccccccCCHH
Confidence            432 222344678999999999998889999999999999999999999996521              1    234567


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          210 PVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       210 ~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      +.+++.+||+.||.+||++.++++
T Consensus       263 ~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          263 AKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhc
Confidence            889999999999999999999985


No 58 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.3e-38  Score=273.15  Aligned_cols=220  Identities=20%  Similarity=0.238  Sum_probs=179.8

Q ss_pred             cCceeeeeccCCCcceEEEEEEEc----CCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLA----PGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~----~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      ..+|.+.+.||+|+||.||+|.+.    ..++..||+|++.               .+++.++||||+++++++......
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            357999999999999999999963    2456789999863               377788999999999999998899


Q ss_pred             EEEEEcCCCCCHHHHHhhcC-------CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCC---EEEEeecC
Q 042690           84 LLVYKFMHNRSISSLLYECL-------RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYF---TVETSDLG  142 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~-------~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~---~~~l~Dfg  142 (266)
                      ++||||+++++|.+++....       .+.      +..++..++.++|..+++|+     ||+++.++   .++|+|||
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG  229 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG  229 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCc
Confidence            99999999999999998643       232      45666777788888888887     99999555   59999999


Q ss_pred             cceeeccccc-cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCc
Q 042690          143 LAKLLMINQT-QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDP  204 (266)
Q Consensus       143 ~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~  204 (266)
                      +++....... .......+|+.|+|||++.+..++.++|||||||++|+|+| |..||...                .+.
T Consensus       230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~  309 (367)
T 3l9p_A          230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK  309 (367)
T ss_dssp             HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCT
T ss_pred             cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc
Confidence            9986532222 22233557889999999988889999999999999999998 88888652                233


Q ss_pred             cccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          205 KTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       205 ~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                      .....+.+++.+||+.||.+||+++++++.|+.+...+
T Consensus       310 ~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~  347 (367)
T 3l9p_A          310 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  347 (367)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence            45567889999999999999999999999999987654


No 59 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=8.3e-38  Score=276.56  Aligned_cols=214  Identities=21%  Similarity=0.229  Sum_probs=177.9

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhcCCCceeeeeeEEEeCC-eEEEEE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVAHHKNLVCLLGYHIEQE-CRLLVY   87 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~~h~~iv~~~~~~~~~~-~~~lv~   87 (266)
                      -+.++|.+.+.||+|+||.||+|.+   .+..||+|.+.            .+++.++||||+++++++.... ..++||
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~---~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE---TTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEe---cCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence            3567899999999999999999997   46789999775            4888999999999999987765 789999


Q ss_pred             EcCCCCCHHHHHhhcCC--CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           88 KFMHNRSISSLLYECLR--PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~--~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      ||+++|+|.+++.....  +.      +..++..++.++|.++++|+     ||+++.++.+||+|||+++.....    
T Consensus       267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----  342 (450)
T 1k9a_A          267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----  342 (450)
T ss_dssp             ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----
Confidence            99999999999986543  23      44566667788888887776     999999999999999999854321    


Q ss_pred             cccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHHh
Q 042690          155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQF  217 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~c  217 (266)
                      .....++..|+|||.+.+..++.++||||||+++|+|+| |+.||...                .+...+..+.+++.+|
T Consensus       343 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c  422 (450)
T 1k9a_A          343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNC  422 (450)
T ss_dssp             ----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHH
Confidence            122356889999999998899999999999999999998 99898752                2334557788999999


Q ss_pred             hhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          218 VKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       218 l~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      |+.||.+||++.++++.|+.+...
T Consensus       423 l~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          423 WHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cCCChhHCcCHHHHHHHHHHHHHh
Confidence            999999999999999999988654


No 60 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=3.4e-37  Score=257.96  Aligned_cols=217  Identities=13%  Similarity=0.109  Sum_probs=180.5

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhc-CCCceeeeeeEEEeCCeEEEEEEcC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVA-HHKNLVCLLGYHIEQECRLLVYKFM   90 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~   90 (266)
                      ++|.+.+.||+|+||.||+|.+. .+++.||+|.+.            ..++.+ +|+|++++++++......++||||+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   88 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNL-LNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   88 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEET-TTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             cceEEEEEEeecCCEEEEEEEEC-CCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence            47999999999999999999975 678899999764            366677 7999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCE-----EEEeecCcceeecccccc
Q 042690           91 HNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFT-----VETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        91 ~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~-----~~l~Dfg~a~~~~~~~~~  153 (266)
                       +++|.+++..... ++      +..++..++.++|.++++|+     ||+++.++.     ++|+|||++.........
T Consensus        89 -~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~  167 (298)
T 1csn_A           89 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK  167 (298)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTC
T ss_pred             -CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccc
Confidence             8899999986433 33      44566667788888888877     899987776     999999999876533221


Q ss_pred             ------ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------------c
Q 042690          154 ------TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------------P  204 (266)
Q Consensus       154 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------------~  204 (266)
                            ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||.....                       +
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (298)
T 1csn_A          168 QHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCA  247 (298)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTT
T ss_pred             ccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHh
Confidence                  22345689999999999998899999999999999999999999976221                       1


Q ss_pred             cccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          205 KTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       205 ~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                      ..+..+.+++.+||+.||.+||+++++++.|+.+.+..
T Consensus       248 ~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~  285 (298)
T 1csn_A          248 GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  285 (298)
T ss_dssp             TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence            34567889999999999999999999999999987643


No 61 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=2.5e-38  Score=268.04  Aligned_cols=220  Identities=27%  Similarity=0.377  Sum_probs=179.8

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      ..+|.+.+.||+|+||.||+|.++  ++..||+|+..              .+++.++||||+++++++...+..++|||
T Consensus        38 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  115 (321)
T 2qkw_B           38 TNNFDHKFLIGHGVFGKVYKGVLR--DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK  115 (321)
T ss_dssp             CCCCSCCCCSCBCSSSEEEEEECT--TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEE
T ss_pred             HhccCccceeecCCCeeEEEEEEC--CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEE
Confidence            457889999999999999999974  68889999654              37778899999999999999999999999


Q ss_pred             cCCCCCHHHHHhhcC----CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc-
Q 042690           89 FMHNRSISSLLYECL----RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT-  152 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~----~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~-  152 (266)
                      |+++++|.+++....    .+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++........ 
T Consensus       116 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  195 (321)
T 2qkw_B          116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT  195 (321)
T ss_dssp             CCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC
T ss_pred             cCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence            999999999996543    233      44555666788888777776     89999999999999999986542222 


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------------------
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------------------  203 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------------------  203 (266)
                      .......||+.|+|||++.+..++.++||||||+++|+|+||+.||....+                             
T Consensus       196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (321)
T 2qkw_B          196 HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD  275 (321)
T ss_dssp             CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTT
T ss_pred             ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcc
Confidence            222335589999999998888899999999999999999999998864221                             


Q ss_pred             ---ccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCCC
Q 042690          204 ---PKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP  244 (266)
Q Consensus       204 ---~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~~  244 (266)
                         +.....+.+++.+||+.||.+||++.++++.|+...+..++
T Consensus       276 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~~  319 (321)
T 2qkw_B          276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES  319 (321)
T ss_dssp             CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSCC
T ss_pred             ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcccC
Confidence               12334567899999999999999999999999999876543


No 62 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=8.6e-38  Score=267.88  Aligned_cols=207  Identities=14%  Similarity=0.100  Sum_probs=177.2

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ..++|.+.+.||+|+||.||+|.++ .++..||+|.+.                 .+++.++||||+++++++.+.+..+
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  117 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEEC-CCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence            4578999999999999999999986 678899999763                 3677889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      +||||+++++|.+++.....++      +..++..++.++|.++++|+     ||+++.+|.++|+|||+++....    
T Consensus       118 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~----  193 (350)
T 1rdq_E          118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----  193 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS----
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC----
Confidence            9999999999999998766654      44566667788888888887     89999999999999999987532    


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhh
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl  218 (266)
                      ......||+.|+|||++.+..++.++|+|||||++|+|++|..||...               .+......+.+++.+||
T Consensus       194 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~lL  273 (350)
T 1rdq_E          194 RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL  273 (350)
T ss_dssp             CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHHS
T ss_pred             CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Confidence            223456899999999999888999999999999999999999999752               23445677889999999


Q ss_pred             hcCCCCCCC-----HHHHHH
Q 042690          219 KEKPPLRPS-----LRIVAL  233 (266)
Q Consensus       219 ~~~p~~Rps-----~~~il~  233 (266)
                      +.||.+||+     ++++++
T Consensus       274 ~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          274 QVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CSCTTTCTTSSTTTTHHHHT
T ss_pred             hcCHHhccCCccCCHHHHHh
Confidence            999999998     787764


No 63 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=3.6e-38  Score=269.00  Aligned_cols=221  Identities=18%  Similarity=0.191  Sum_probs=180.8

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcC----CCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCe
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAP----GDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQEC   82 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~----~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~   82 (266)
                      ..++|.+.+.||+|+||.||+|.+..    .++..||+|.+.               .+++.++||||+++++++...+.
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  124 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP  124 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence            35689999999999999999999853    345889999864               37788899999999999999999


Q ss_pred             EEEEEEcCCCCCHHHHHhhcC------------------------CCC------HHHHHHHHHHHhhhcCcccc-----c
Q 042690           83 RLLVYKFMHNRSISSLLYECL------------------------RPT------WQQRMQDCIRDCWRTRALAC-----R  127 (266)
Q Consensus        83 ~~lv~e~~~~~~L~~~l~~~~------------------------~~~------~~~~l~~~~~~~~~~~~~h~-----n  127 (266)
                      .++||||+++++|.+++....                        .+.      +..++..++.++|.++++|+     |
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N  204 (343)
T 1luf_A          125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN  204 (343)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcce
Confidence            999999999999999998642                        222      44566677788888888887     8


Q ss_pred             eeecCCCEEEEeecCcceeeccccc-cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----
Q 042690          128 ILLHDYFTVETSDLGLAKLLMINQT-QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----  201 (266)
Q Consensus       128 ili~~~~~~~l~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----  201 (266)
                      |+++.++.++|+|||++........ .......+++.|+|||++.+..++.++||||||+++|+|+| |..||...    
T Consensus       205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  284 (343)
T 1luf_A          205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE  284 (343)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH
Confidence            9999999999999999976532221 22234567889999999888889999999999999999999 88888652    


Q ss_pred             ------------CCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          202 ------------SDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       202 ------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                                  .+......+.+++.+||+.||.+||++.++++.|+.+.+..
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          285 VIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred             HHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence                        23345567889999999999999999999999999987643


No 64 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=2e-38  Score=274.11  Aligned_cols=220  Identities=20%  Similarity=0.269  Sum_probs=169.2

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcC--CCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAP--GDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~--~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      ..+|.+.+.||+|+||.||+|.+..  ..+..||+|.+.               .+++.++||||+++++++...+..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            3479999999999999999998642  357779999764               37778899999999999999899999


Q ss_pred             EEEcCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           86 VYKFMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      ||||+++++|.+++.... .+.      +..++..++.++|..+++|+     ||+++.++.+||+|||+++........
T Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  203 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA  203 (373)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence            999999999999997653 344      34556666788888888877     899999999999999999876432221


Q ss_pred             --ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccC----------------CCCccccchHHHHH
Q 042690          154 --TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQ----------------GSDPKTLEKPVMIA  214 (266)
Q Consensus       154 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~----------------~~~~~~~~~~~~l~  214 (266)
                        ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||..                ..+......+.+++
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li  283 (373)
T 2qol_A          204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLM  283 (373)
T ss_dssp             ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHH
T ss_pred             ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHH
Confidence              1122345678999999988889999999999999999998 9999864                12334567788999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          215 IQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                      .+||+.||.+||+++++++.|+.+...+
T Consensus       284 ~~cl~~dp~~RPs~~~i~~~L~~~~~~~  311 (373)
T 2qol_A          284 LDCWQKDRNNRPKFEQIVSILDKLIRNP  311 (373)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred             HHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence            9999999999999999999999997654


No 65 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=3.8e-38  Score=270.60  Aligned_cols=219  Identities=21%  Similarity=0.243  Sum_probs=179.6

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEc----CCCcceeeeeeHH---------------HHhhhc-CCCceeeeeeEEEeCC
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLA----PGDKTNIGVKKLD---------------KVVHVA-HHKNLVCLLGYHIEQE   81 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~~~vaiK~~~---------------~~l~~~-~h~~iv~~~~~~~~~~   81 (266)
                      ..++|.+.+.||+|+||.||+|.+.    ..++..||+|++.               ++++.+ +||||+++++++...+
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~   99 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   99 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence            4578999999999999999999852    3567889999874               256667 7899999999998755


Q ss_pred             e-EEEEEEcCCCCCHHHHHhhcCC--------------------------------------------------------
Q 042690           82 C-RLLVYKFMHNRSISSLLYECLR--------------------------------------------------------  104 (266)
Q Consensus        82 ~-~~lv~e~~~~~~L~~~l~~~~~--------------------------------------------------------  104 (266)
                      . .++||||+.+|+|.+++.....                                                        
T Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (359)
T 3vhe_A          100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  179 (359)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred             CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence            4 8999999999999999976432                                                        


Q ss_pred             ----------CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc-cccccccCCC
Q 042690          105 ----------PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT-QTLTGMRETK  162 (266)
Q Consensus       105 ----------~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~-~~~~~~~~~~  162 (266)
                                +.      +..++..++.++|..+++|+     ||+++.++.++|+|||++........ .......+|+
T Consensus       180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~  259 (359)
T 3vhe_A          180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL  259 (359)
T ss_dssp             ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECG
T ss_pred             ccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCc
Confidence                      22      44567777788888888887     99999999999999999986543222 2233456788


Q ss_pred             CcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCCC-----------------CccccchHHHHHHHhhhcCCCC
Q 042690          163 GYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQGS-----------------DPKTLEKPVMIAIQFVKEKPPL  224 (266)
Q Consensus       163 ~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~~-----------------~~~~~~~~~~l~~~cl~~~p~~  224 (266)
                      .|+|||++.+..++.++||||||+++|+|+| |..||....                 +......+.+++.+||+.||.+
T Consensus       260 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  339 (359)
T 3vhe_A          260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ  339 (359)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             eeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhh
Confidence            9999999988889999999999999999998 999987522                 2335567889999999999999


Q ss_pred             CCCHHHHHHHHHHHHh
Q 042690          225 RPSLRIVALMLQSILE  240 (266)
Q Consensus       225 Rps~~~il~~l~~~~~  240 (266)
                      ||+++++++.|+.+.+
T Consensus       340 Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          340 RPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             SCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHH
Confidence            9999999999998865


No 66 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.8e-38  Score=269.19  Aligned_cols=223  Identities=20%  Similarity=0.182  Sum_probs=181.6

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEc----CCCcceeeeeeHH---------------HHhhhc-CCCceeeeeeEEEeC
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLA----PGDKTNIGVKKLD---------------KVVHVA-HHKNLVCLLGYHIEQ   80 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~~~vaiK~~~---------------~~l~~~-~h~~iv~~~~~~~~~   80 (266)
                      -..++|.+.+.||+|+||.||+|.+.    .+.+..||+|.+.               .+++.+ +||||+++++++...
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  121 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS  121 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence            34568999999999999999999973    3567789999864               367788 899999999999999


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhcCC-----------------------CC------HHHHHHHHHHHhhhcCcccc-----
Q 042690           81 ECRLLVYKFMHNRSISSLLYECLR-----------------------PT------WQQRMQDCIRDCWRTRALAC-----  126 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~-----------------------~~------~~~~l~~~~~~~~~~~~~h~-----  126 (266)
                      +..++||||+++++|.+++.....                       ++      +..++..++.++|..+++|+     
T Consensus       122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~  201 (344)
T 1rjb_A          122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR  201 (344)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred             CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence            999999999999999999976432                       22      45567777788888877776     


Q ss_pred             ceeecCCCEEEEeecCcceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCCC--
Q 042690          127 RILLHDYFTVETSDLGLAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQGS--  202 (266)
Q Consensus       127 nili~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~~--  202 (266)
                      ||+++.++.++|+|||++......... ......+|+.|+|||++.+..++.++||||||+++|+|+| |..||....  
T Consensus       202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~  281 (344)
T 1rjb_A          202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD  281 (344)
T ss_dssp             GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence            899999999999999999876433222 2233456788999999988889999999999999999998 998987622  


Q ss_pred             ---------------CccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          203 ---------------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       203 ---------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                                     +......+.+++.+||+.||.+||++.++++.|+.+.....
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  337 (344)
T 1rjb_A          282 ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE  337 (344)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred             HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence                           23345678899999999999999999999999999876543


No 67 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=2.4e-38  Score=263.83  Aligned_cols=219  Identities=22%  Similarity=0.305  Sum_probs=182.9

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      ...+|.+.+.||+|+||.||+|.+. .++..+|+|.+.             .+++.++||||+++++++.+++..++|||
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEG-GGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEec-CCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            3568999999999999999999986 568889999754             47889999999999999999999999999


Q ss_pred             cCCCCCHHHHHhhcCC--CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           89 FMHNRSISSLLYECLR--PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~~--~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      |+.+++|.+++.....  ++      +..++..++.++|..+++|+     ||+++.++.++|+|||++...........
T Consensus        90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  169 (288)
T 3kfa_A           90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  169 (288)
T ss_dssp             CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred             cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence            9999999999986433  33      33556666788887777776     89999999999999999987654333344


Q ss_pred             ccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHHhh
Q 042690          156 TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~cl  218 (266)
                      ....+++.|+|||.+.+..++.++||||||+++|+|++ |..||...                .+......+.+++.+||
T Consensus       170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  249 (288)
T 3kfa_A          170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW  249 (288)
T ss_dssp             TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHh
Confidence            44556788999999988889999999999999999999 88888652                23345567889999999


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHhC
Q 042690          219 KEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       219 ~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      +.||.+||+++++++.|+.+...
T Consensus       250 ~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          250 QWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCChhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999999988653


No 68 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.4e-38  Score=271.78  Aligned_cols=222  Identities=18%  Similarity=0.233  Sum_probs=182.1

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcC------CCcceeeeeeHH---------------HHhhhc-CCCceeeeeeEEEe
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAP------GDKTNIGVKKLD---------------KVVHVA-HHKNLVCLLGYHIE   79 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~------~~~~~vaiK~~~---------------~~l~~~-~h~~iv~~~~~~~~   79 (266)
                      ...+|.+.+.||+|+||.||+|.+..      ..+..||+|++.               ++++.+ +||||+++++++..
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            34689999999999999999999742      344679999764               266677 89999999999999


Q ss_pred             CCeEEEEEEcCCCCCHHHHHhhcC----------------CC------CHHHHHHHHHHHhhhcCcccc-----ceeecC
Q 042690           80 QECRLLVYKFMHNRSISSLLYECL----------------RP------TWQQRMQDCIRDCWRTRALAC-----RILLHD  132 (266)
Q Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~----------------~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~  132 (266)
                      ++..++||||+++++|.+++....                .+      .+..++..++.++|..+++|+     ||+++.
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  226 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE  226 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcC
Confidence            999999999999999999998643                13      344566667788888888777     999999


Q ss_pred             CCEEEEeecCcceeeccccc-cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC---------
Q 042690          133 YFTVETSDLGLAKLLMINQT-QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG---------  201 (266)
Q Consensus       133 ~~~~~l~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~---------  201 (266)
                      ++.+||+|||++........ .......+++.|+|||++.+..++.++||||||+++|+|++ |..||...         
T Consensus       227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~  306 (382)
T 3tt0_A          227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL  306 (382)
T ss_dssp             TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            99999999999986543222 22334556788999999998899999999999999999999 88888752         


Q ss_pred             -------CCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          202 -------SDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       202 -------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                             .+......+.+++.+||+.||.+||+++++++.|+.+.....
T Consensus       307 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  355 (382)
T 3tt0_A          307 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS  355 (382)
T ss_dssp             HTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             HcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence                   233456778899999999999999999999999999976543


No 69 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=4.4e-38  Score=267.29  Aligned_cols=217  Identities=19%  Similarity=0.253  Sum_probs=174.1

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcc----eeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKT----NIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~----~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      ..+|.+.+.||+|+||.||+|.+. .++.    .|++|.+.               .+++.++||||+++++++.... .
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~   91 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V   91 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEC-C----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred             HHHcccceEEeeCCCeEEEEEEEc-CCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence            457999999999999999999975 3333    35777653               3778899999999999998755 7


Q ss_pred             EEEEEcCCCCCHHHHHhhcC-CC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           84 LLVYKFMHNRSISSLLYECL-RP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~-~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      ++++||+.+|+|.+++.... .+      .+..++..++.++|..+++|+     ||+++.++.+||+|||+++......
T Consensus        92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  171 (327)
T 3poz_A           92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence            78999999999999998643 23      355667777788888888887     9999999999999999998764332


Q ss_pred             cc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHH
Q 042690          152 TQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMI  213 (266)
Q Consensus       152 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l  213 (266)
                      .. ......+|..|+|||.+.+..++.++||||||+++|+|+| |+.||...                .++.....+.++
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  251 (327)
T 3poz_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI  251 (327)
T ss_dssp             C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHH
T ss_pred             ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHH
Confidence            22 2233456789999999988899999999999999999999 99998751                233455678899


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          214 AIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       214 ~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      +.+||+.||.+||++.++++.|+.+...
T Consensus       252 i~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          252 MVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence            9999999999999999999999988654


No 70 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=8.5e-38  Score=268.11  Aligned_cols=210  Identities=18%  Similarity=0.194  Sum_probs=175.2

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH-----------------Hhhhc-CCCceeeeeeEEEeCCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-----------------VVHVA-HHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~-----------------~l~~~-~h~~iv~~~~~~~~~~~~   83 (266)
                      ..++|.+.+.||+|+||.||+|.++ .+++.||+|++..                 +++.+ +||+|+++++++.+.+..
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   96 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL   96 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEET-TEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence            4678999999999999999999986 6788999997642                 44444 799999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      ++||||+++|+|.+++.....+.      +..++..++.++|.++++|+     ||+++.+|.++|+|||+++.... ..
T Consensus        97 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~-~~  175 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW-DG  175 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC-TT
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc-CC
Confidence            99999999999999998766654      44566677788888888887     99999999999999999986431 22


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC---------------CccccchHHHHHHHh
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------DPKTLEKPVMIAIQF  217 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------~~~~~~~~~~l~~~c  217 (266)
                      .......||+.|+|||++.+..++.++|+||||+++|+|++|+.||....               +......+.+++.+|
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~l  255 (353)
T 2i0e_A          176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGL  255 (353)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHH
T ss_pred             cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHH
Confidence            23345678999999999998899999999999999999999999997622               344567788999999


Q ss_pred             hhcCCCCCCC-----HHHHHH
Q 042690          218 VKEKPPLRPS-----LRIVAL  233 (266)
Q Consensus       218 l~~~p~~Rps-----~~~il~  233 (266)
                      |+.||.+||+     ++++++
T Consensus       256 L~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          256 MTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             TCSCTTSCTTCSTTHHHHHHT
T ss_pred             hhcCHHHcCCCCCCCHHHHhc
Confidence            9999999995     466643


No 71 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=9e-38  Score=268.91  Aligned_cols=212  Identities=15%  Similarity=0.149  Sum_probs=167.7

Q ss_pred             hcccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           20 FGSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        20 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      .....+|.+.+.||+|+||.||++.+. .++..||+|++.             .+++.++||||+++++++.+.+..++|
T Consensus        16 ~~~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   94 (361)
T 3uc3_A           16 MHDSDRYDFVKDIGSGNFGVARLMRDK-LTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAII   94 (361)
T ss_dssp             CCCTTTEEEEEEESSSTTSSEEEEEET-TTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCCCCcEEEEEEeccCCCEEEEEEEEC-CCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence            345678999999999999999999986 678899999764             377889999999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCE--EEEeecCcceeecccccc
Q 042690           87 YKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFT--VETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~--~~l~Dfg~a~~~~~~~~~  153 (266)
                      |||+.+++|.+++.....++      +..++..++.++|.++++|+     ||+++.++.  +||+|||+++....  ..
T Consensus        95 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~--~~  172 (361)
T 3uc3_A           95 MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--HS  172 (361)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred             EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc--cC
Confidence            99999999999998766544      44666677788888888887     899987765  99999999975321  22


Q ss_pred             ccccccCCCCcCCccccCCCCCCcc-cchhhHHHHHHHHHhCCCcccCCCC---------------------ccccchHH
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVK-VDVYSFGVMLLEIISCRCVERQGSD---------------------PKTLEKPV  211 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~i~~~l~tg~~p~~~~~~---------------------~~~~~~~~  211 (266)
                      ......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.....                     ......+.
T Consensus       173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  252 (361)
T 3uc3_A          173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECC  252 (361)
T ss_dssp             --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHH
T ss_pred             CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHH
Confidence            2334568999999999887777655 8999999999999999999975211                     12456788


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHH
Q 042690          212 MIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       212 ~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                      +++.+||+.||.+|||+.++++.
T Consensus       253 ~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          253 HLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHccCChhHCcCHHHHHhC
Confidence            99999999999999999999854


No 72 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=7.2e-38  Score=265.94  Aligned_cols=206  Identities=15%  Similarity=0.176  Sum_probs=173.9

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .|.+.+.||+|+||.||+|.+. .++..||+|.+.                    .+++.++||||+++++++.+....+
T Consensus        12 ~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           12 YYDTGEELGSGQFAVVKKCREK-STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ceEeceEEeeCCCeEEEEEEEC-CCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            6899999999999999999986 678889998652                    3778899999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCC----EEEEeecCcceeecc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYF----TVETSDLGLAKLLMI  149 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~----~~~l~Dfg~a~~~~~  149 (266)
                      +||||+++++|.+++.....++      +..++..++.++|..+++|+     ||+++.++    .++|+|||++.....
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~  170 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF  170 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT
T ss_pred             EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC
Confidence            9999999999999998765544      44566667788888887776     89999887    899999999987642


Q ss_pred             ccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------ccccchH
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------PKTLEKP  210 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------~~~~~~~  210 (266)
                      .  .......||+.|+|||++.+..++.++||||||+++|+|++|..||.....                   ......+
T Consensus       171 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (326)
T 2y0a_A          171 G--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA  248 (326)
T ss_dssp             T--SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHH
T ss_pred             C--CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHH
Confidence            2  223346689999999999988899999999999999999999999965221                   2234567


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 042690          211 VMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       211 ~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      .+++.+||+.||.+|||++++++
T Consensus       249 ~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          249 KDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhhCCCHHHHhc
Confidence            78999999999999999999986


No 73 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=1.5e-37  Score=267.67  Aligned_cols=217  Identities=11%  Similarity=0.042  Sum_probs=175.0

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCC----CcceeeeeeHHH-------------------------HhhhcCCCceeeee
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPG----DKTNIGVKKLDK-------------------------VVHVAHHKNLVCLL   74 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~----~~~~vaiK~~~~-------------------------~l~~~~h~~iv~~~   74 (266)
                      ++|.+.+.||+|+||.||+|.+..+    .+..||+|.+..                         .++.++||||++++
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~  114 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW  114 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence            4799999999999999999998633    357899998531                         34567899999999


Q ss_pred             eEEEeC----CeEEEEEEcCCCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeec--CCCEE
Q 042690           75 GYHIEQ----ECRLLVYKFMHNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLH--DYFTV  136 (266)
Q Consensus        75 ~~~~~~----~~~~lv~e~~~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~--~~~~~  136 (266)
                      +++...    ...++||||+ +++|.+++... ..++      +..++..++.++|..+++|+     ||+++  .++.+
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~  193 (364)
T 3op5_A          115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV  193 (364)
T ss_dssp             EEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCE
T ss_pred             eeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeE
Confidence            998764    4589999999 99999999865 3444      44566667788888888777     99999  88999


Q ss_pred             EEeecCcceeecccccc------ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------
Q 042690          137 ETSDLGLAKLLMINQTQ------TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------  203 (266)
Q Consensus       137 ~l~Dfg~a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------  203 (266)
                      +|+|||+++........      ......||+.|+|||++.+..++.++||||||+++|+|+||+.||.....       
T Consensus       194 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~  273 (364)
T 3op5_A          194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRD  273 (364)
T ss_dssp             EECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHH
T ss_pred             EEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHH
Confidence            99999999876432211      11234589999999999998899999999999999999999999985211       


Q ss_pred             -------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          204 -------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       204 -------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                                         ...+..+.+++..||+.+|.+||++++|++.|+.+...
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~  330 (364)
T 3op5_A          274 SKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA  330 (364)
T ss_dssp             HHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence                               23356788999999999999999999999999988654


No 74 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=7e-38  Score=264.00  Aligned_cols=219  Identities=19%  Similarity=0.228  Sum_probs=181.3

Q ss_pred             cCceeeeeccCCCcceEEEEEEEc----CCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLA----PGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~----~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      ..+|.+.+.||+|+||.||+|.+.    ..++..||+|.+.               .+++.++||||+++++++...+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            468999999999999999999873    2355789999764               367788999999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcCC------------------------C------CHHHHHHHHHHHhhhcCcccc-----ce
Q 042690           84 LLVYKFMHNRSISSLLYECLR------------------------P------TWQQRMQDCIRDCWRTRALAC-----RI  128 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~------------------------~------~~~~~l~~~~~~~~~~~~~h~-----ni  128 (266)
                      ++||||+++++|.+++.....                        +      .+..++..++.++|.++++|+     ||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NI  181 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNI  181 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheE
Confidence            999999999999999986432                        2      245567777788888888877     89


Q ss_pred             eecCCCEEEEeecCcceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC-----
Q 042690          129 LLHDYFTVETSDLGLAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG-----  201 (266)
Q Consensus       129 li~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~-----  201 (266)
                      +++.++.++|+|||++......... ......+++.|+|||.+.+..++.++||||||+++|+|+| |..||...     
T Consensus       182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  261 (314)
T 2ivs_A          182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL  261 (314)
T ss_dssp             EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            9999999999999999876432222 2233456788999999988889999999999999999999 98888652     


Q ss_pred             -----------CCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          202 -----------SDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       202 -----------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                                 .+......+.+++.+||+.||.+||++.++++.|+.+...
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          262 FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence                       2234566788999999999999999999999999998653


No 75 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1.4e-37  Score=263.52  Aligned_cols=205  Identities=17%  Similarity=0.175  Sum_probs=171.5

Q ss_pred             eeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEcCC
Q 042690           26 IYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMH   91 (266)
Q Consensus        26 ~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~   91 (266)
                      |...+.||+|+||.||+|... .+++.||+|++.              .+++.++||||+++++++...+..++||||++
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  125 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREK-HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ  125 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             hhccEEeccCCCeEEEEEEEC-CCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCC
Confidence            677789999999999999975 578899999764              37778899999999999999999999999999


Q ss_pred             CCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccccccccC
Q 042690           92 NRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRE  160 (266)
Q Consensus        92 ~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~  160 (266)
                      +++|.+++... .+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++...... ........|
T Consensus       126 ~~~L~~~l~~~-~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~g  203 (321)
T 2c30_A          126 GGALTDIVSQV-RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD-VPKRKSLVG  203 (321)
T ss_dssp             SCBHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS-SCCBCCCCS
T ss_pred             CCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccC-ccccccccC
Confidence            99999998753 333      44555666788887777776     899999999999999999876432 222345678


Q ss_pred             CCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------CccccchHHHHHHHhhhcCC
Q 042690          161 TKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLEKPVMIAIQFVKEKP  222 (266)
Q Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~~~~~l~~~cl~~~p  222 (266)
                      |+.|+|||.+.+..++.++||||||+++|+|++|+.||....                  .......+.+++.+||+.||
T Consensus       204 t~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  283 (321)
T 2c30_A          204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDP  283 (321)
T ss_dssp             CGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSST
T ss_pred             CccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCCh
Confidence            999999999998889999999999999999999999986521                  11234567899999999999


Q ss_pred             CCCCCHHHHHH
Q 042690          223 PLRPSLRIVAL  233 (266)
Q Consensus       223 ~~Rps~~~il~  233 (266)
                      .+||+++++++
T Consensus       284 ~~Rps~~ell~  294 (321)
T 2c30_A          284 QERATAQELLD  294 (321)
T ss_dssp             TTSCCHHHHHT
T ss_pred             hhCcCHHHHhc
Confidence            99999999986


No 76 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=2.4e-38  Score=280.21  Aligned_cols=222  Identities=22%  Similarity=0.287  Sum_probs=176.7

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      ..++|.+.+.||+|+||.||+|.+.  .+..||+|.+.             .+++.++||||+++++++.. +..++|||
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e  258 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE  258 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET--TTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEEC--CCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence            3467999999999999999999985  45679999765             37889999999999999865 66889999


Q ss_pred             cCCCCCHHHHHhhc--CCC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           89 FMHNRSISSLLYEC--LRP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        89 ~~~~~~L~~~l~~~--~~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      |+++|+|.+++...  ..+      .+..++..++.++|..+++|+     ||+++.++.+||+|||+++..........
T Consensus       259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  338 (452)
T 1fmk_A          259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR  338 (452)
T ss_dssp             CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred             hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence            99999999999743  223      344566677788888888877     99999999999999999987643322233


Q ss_pred             ccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHHhh
Q 042690          156 TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~cl  218 (266)
                      ....++..|+|||.+.+..++.++||||||+++|+|+| |+.||...                .++..+..+.+++.+||
T Consensus       339 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  418 (452)
T 1fmk_A          339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW  418 (452)
T ss_dssp             ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            34456788999999888889999999999999999999 88898651                23445667889999999


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHhCCCCCC
Q 042690          219 KEKPPLRPSLRIVALMLQSILEVPSPPC  246 (266)
Q Consensus       219 ~~~p~~Rps~~~il~~l~~~~~~~~~~~  246 (266)
                      +.||.+||+++++++.|+.+.....+..
T Consensus       419 ~~dP~~Rpt~~~l~~~L~~~~~~~~~~~  446 (452)
T 1fmk_A          419 RKEPEERPTFEYLQAFLEDYFTSTEPQY  446 (452)
T ss_dssp             CSSGGGSCCHHHHHHHHHTTTSCSCCCC
T ss_pred             cCChhhCcCHHHHHHHHHHHhccCCccc
Confidence            9999999999999999999877655443


No 77 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=5.5e-38  Score=263.12  Aligned_cols=211  Identities=18%  Similarity=0.210  Sum_probs=167.7

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------HHhhh--cCCCceeeeeeEEEeC----CeEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------KVVHV--AHHKNLVCLLGYHIEQ----ECRLLV   86 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------~~l~~--~~h~~iv~~~~~~~~~----~~~~lv   86 (266)
                      ++|.+.+.||+|+||.||+|.+   ++..||+|++.           +++..  ++||||+++++++...    ...++|
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv   84 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSW---QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI   84 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             CcEEEEEeeccCCCcEEEEEEE---CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence            4899999999999999999997   67889999864           23334  7899999999997543    458899


Q ss_pred             EEcCCCCCHHHHHhhcCCC------CHHHHHHHHHHHhh--------hcCcccc-----ceeecCCCEEEEeecCcceee
Q 042690           87 YKFMHNRSISSLLYECLRP------TWQQRMQDCIRDCW--------RTRALAC-----RILLHDYFTVETSDLGLAKLL  147 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~~------~~~~~l~~~~~~~~--------~~~~~h~-----nili~~~~~~~l~Dfg~a~~~  147 (266)
                      |||+++++|.++++.. .+      .+..++..++.++|        ..+++|+     ||+++.++.+||+|||++...
T Consensus        85 ~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  163 (301)
T 3q4u_A           85 THYHEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH  163 (301)
T ss_dssp             ECCCTTCBHHHHHTTC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             hhhccCCCHHHHHhhc-ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence            9999999999999643 33      34456666778888        6666665     999999999999999999876


Q ss_pred             cccccc---ccccccCCCCcCCccccCCC------CCCcccchhhHHHHHHHHHhC----------CCcccCCCC-----
Q 042690          148 MINQTQ---TLTGMRETKGYLPPEWFRNM------PVTVKVDVYSFGVMLLEIISC----------RCVERQGSD-----  203 (266)
Q Consensus       148 ~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~i~~~l~tg----------~~p~~~~~~-----  203 (266)
                      ......   ......||+.|+|||++.+.      .++.++||||||+++|+|+||          +.||.....     
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~  243 (301)
T 3q4u_A          164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF  243 (301)
T ss_dssp             ETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             ccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcch
Confidence            433222   12335789999999998776      455789999999999999999          777754111     


Q ss_pred             ----------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042690          204 ----------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSI  238 (266)
Q Consensus       204 ----------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~  238 (266)
                                            ......+.+++.+||+.||.+|||+.++++.|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence                                  01224578899999999999999999999999875


No 78 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=6.7e-38  Score=276.92  Aligned_cols=210  Identities=16%  Similarity=0.142  Sum_probs=175.0

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ...+|.+.+.||+|+||.||+|.+. .++..||+|++.                 .+++.++||||+++++++.+.+..+
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~  224 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEK-ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC  224 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEc-CCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEE
Confidence            3568999999999999999999976 678899999764                 2556778999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCCH------HHHHHHHHHHhhh-cCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           85 LVYKFMHNRSISSLLYECLRPTW------QQRMQDCIRDCWR-TRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~------~~~l~~~~~~~~~-~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      +||||+++++|.+++.....++.      ..++..++.++|. .+++|+     |||++.++.++|+|||+++.... ..
T Consensus       225 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~-~~  303 (446)
T 4ejn_A          225 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DG  303 (446)
T ss_dssp             EEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred             EEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC-CC
Confidence            99999999999999987665543      3456666677876 777776     99999999999999999975432 22


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHh
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQF  217 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~c  217 (266)
                      .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...               .+......+.+++.+|
T Consensus       304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~  383 (446)
T 4ejn_A          304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGL  383 (446)
T ss_dssp             ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHH
T ss_pred             cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHH
Confidence            2334567899999999999889999999999999999999999999762               2344567788999999


Q ss_pred             hhcCCCCCC-----CHHHHHH
Q 042690          218 VKEKPPLRP-----SLRIVAL  233 (266)
Q Consensus       218 l~~~p~~Rp-----s~~~il~  233 (266)
                      |+.||.+||     +++++++
T Consensus       384 L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          384 LKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             TCSSTTTSTTCSTTTHHHHHT
T ss_pred             cccCHHHhCCCCCCCHHHHHh
Confidence            999999999     9999875


No 79 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=6e-38  Score=259.18  Aligned_cols=210  Identities=20%  Similarity=0.275  Sum_probs=165.4

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      ++++|.+.+.||+|+||.||+|.+   .+..+|+|.+.                  ++++.++||||+++++++..++..
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFW---IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL   81 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEE---TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred             chhheeeeeeeccCCCeEEEEEEE---cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence            467899999999999999999997   47789998753                  367788999999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCC------CHHHHHHHHHHHhhhcC---cccc-----ceeecC--------CCEEEEeec
Q 042690           84 LLVYKFMHNRSISSLLYECLRP------TWQQRMQDCIRDCWRTR---ALAC-----RILLHD--------YFTVETSDL  141 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~------~~~~~l~~~~~~~~~~~---~~h~-----nili~~--------~~~~~l~Df  141 (266)
                      ++||||+++++|.+++... .+      .+..++..++.++|..+   ++|+     ||+++.        ++.++|+||
T Consensus        82 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           82 CLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EEEEECCTTEEHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEEEEcCCCCCHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            9999999999999998643 33      34455666667777666   5555     999986        778999999


Q ss_pred             CcceeeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC-----------------CCc
Q 042690          142 GLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG-----------------SDP  204 (266)
Q Consensus       142 g~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~-----------------~~~  204 (266)
                      |++......   ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||...                 .+.
T Consensus       161 g~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  237 (271)
T 3dtc_A          161 GLAREWHRT---TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPS  237 (271)
T ss_dssp             CC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCT
T ss_pred             Ccccccccc---cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCc
Confidence            999865422   222456899999999998888999999999999999999999999751                 123


Q ss_pred             cccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042690          205 KTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSI  238 (266)
Q Consensus       205 ~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~  238 (266)
                      .....+.+++.+||+.||.+||++.++++.|+.+
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          238 TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            4556788999999999999999999999999753


No 80 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=8.4e-38  Score=263.40  Aligned_cols=220  Identities=18%  Similarity=0.205  Sum_probs=181.8

Q ss_pred             ccCceeeeeccCCCcceEEEEEEE----cCCCcceeeeeeHH---------------HHhhhc-CCCceeeeeeEEEeCC
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVL----APGDKTNIGVKKLD---------------KVVHVA-HHKNLVCLLGYHIEQE   81 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~----~~~~~~~vaiK~~~---------------~~l~~~-~h~~iv~~~~~~~~~~   81 (266)
                      ..++|.+.+.||+|+||.||+|.+    ...++..||+|.+.               .+++.+ +||||+++++++..++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            456899999999999999999986    33577889999764               266777 8999999999999999


Q ss_pred             eEEEEEEcCCCCCHHHHHhhcCC------------------CC------HHHHHHHHHHHhhhcCcccc-----ceeecC
Q 042690           82 CRLLVYKFMHNRSISSLLYECLR------------------PT------WQQRMQDCIRDCWRTRALAC-----RILLHD  132 (266)
Q Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~------------------~~------~~~~l~~~~~~~~~~~~~h~-----nili~~  132 (266)
                      ..++||||+++++|.+++.....                  ++      +..++..++.++|..+++|+     ||+++.
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  180 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH  180 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEET
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcC
Confidence            99999999999999999986432                  33      44556667788888888877     899999


Q ss_pred             CCEEEEeecCcceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCCC--------
Q 042690          133 YFTVETSDLGLAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQGS--------  202 (266)
Q Consensus       133 ~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~~--------  202 (266)
                      ++.++|+|||++......... ......+++.|+|||.+.+..++.++||||||+++|+|+| |..||....        
T Consensus       181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~  260 (313)
T 1t46_A          181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM  260 (313)
T ss_dssp             TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHH
T ss_pred             CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHH
Confidence            999999999999876433222 1223456788999999888889999999999999999999 888886522        


Q ss_pred             ---------CccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          203 ---------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       203 ---------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                               +......+.+++.+||+.||.+||+++++++.|+.+...
T Consensus       261 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          261 IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence                     233556788999999999999999999999999998764


No 81 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=7.9e-38  Score=275.07  Aligned_cols=211  Identities=17%  Similarity=0.141  Sum_probs=176.8

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ..++|.+.+.||+|+||+||+|.++ .+++.||+|++.                 .+++.++||||+++++++.+++..+
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  150 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY  150 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEc-CCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence            3568999999999999999999986 678889999764                 2677889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           85 LVYKFMHNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      +||||+++|+|.+++... ..++      +..++..++.++|..+++|+     |||++.++.+||+|||+++.......
T Consensus       151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~  230 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT  230 (437)
T ss_dssp             EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred             EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence            999999999999999863 4444      45667777788888888887     99999999999999999987654444


Q ss_pred             cccccccCCCCcCCccccC-----CCCCCcccchhhHHHHHHHHHhCCCcccCCC-----------------C---cccc
Q 042690          153 QTLTGMRETKGYLPPEWFR-----NMPVTVKVDVYSFGVMLLEIISCRCVERQGS-----------------D---PKTL  207 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-----------------~---~~~~  207 (266)
                      .......||+.|+|||++.     ...++.++|+|||||++|||++|+.||....                 +   ....
T Consensus       231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s  310 (437)
T 4aw2_A          231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVS  310 (437)
T ss_dssp             EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSC
T ss_pred             cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCC
Confidence            3444567999999999886     4568999999999999999999999997521                 1   2256


Q ss_pred             chHHHHHHHhhhcCCCC--CCCHHHHHH
Q 042690          208 EKPVMIAIQFVKEKPPL--RPSLRIVAL  233 (266)
Q Consensus       208 ~~~~~l~~~cl~~~p~~--Rps~~~il~  233 (266)
                      ..+.+++.+||..+|.+  ||+++|+++
T Consensus       311 ~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          311 ENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            77889999999888877  999999875


No 82 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.4e-37  Score=262.51  Aligned_cols=209  Identities=21%  Similarity=0.317  Sum_probs=170.4

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      +-.++|.+.+.||+|+||+||+|.+.  +++.||+|++.                ++++.++||||+++++++.+++..+
T Consensus        18 ~l~~~y~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   95 (311)
T 3niz_A           18 GLMEKYQKLEKVGEGTYGVVYKAKDS--QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT   95 (311)
T ss_dssp             CSSCEEEEEEEEEECSSCEEEEEEET--TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred             chHhhhHhhhhccCCCCeEEEEEEEC--CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence            34578999999999999999999984  68899999754                3778899999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           85 LVYKFMHNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      +||||+++ +|.+++..... ++      +..++..++.++|..+++|+     ||+++.++.++|+|||++..... ..
T Consensus        96 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~-~~  173 (311)
T 3niz_A           96 LVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-PV  173 (311)
T ss_dssp             EEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS-CC
T ss_pred             EEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCC-Cc
Confidence            99999986 88888875433 33      44566677788888888777     99999999999999999987542 22


Q ss_pred             cccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCCc---------------------------
Q 042690          153 QTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSDP---------------------------  204 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~---------------------------  204 (266)
                      .......+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||......                           
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  253 (311)
T 3niz_A          174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW  253 (311)
T ss_dssp             C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred             ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence            23344568999999998876 45899999999999999999999999652211                           


Q ss_pred             ------------------cccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          205 ------------------KTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       205 ------------------~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                        .....+.+++.+||+.||.+|||++++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                              12346678999999999999999999885


No 83 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.7e-37  Score=260.13  Aligned_cols=209  Identities=15%  Similarity=0.216  Sum_probs=168.8

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeH----------------------------------------HHH
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKL----------------------------------------DKV   61 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~----------------------------------------~~~   61 (266)
                      .+++|.+.+.||+|+||.||+|.+. .+++.||+|.+                                        .++
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   89 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNE-NDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI   89 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEET-TTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEEC-CCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence            3578999999999999999999975 67888999864                                        147


Q ss_pred             hhhcCCCceeeeeeEEEe--CCeEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ce
Q 042690           62 VHVAHHKNLVCLLGYHIE--QECRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RI  128 (266)
Q Consensus        62 l~~~~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----ni  128 (266)
                      ++.++||||+++++++.+  ....++||||+++++|.+++.. ..++      +..++..++.++|..+++|+     ||
T Consensus        90 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni  168 (298)
T 2zv2_A           90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL  168 (298)
T ss_dssp             HHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred             HHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence            788899999999999986  5678999999999999886543 2333      44566677788888887776     89


Q ss_pred             eecCCCEEEEeecCcceeeccccccccccccCCCCcCCccccCCCC---CCcccchhhHHHHHHHHHhCCCcccCC----
Q 042690          129 LLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMP---VTVKVDVYSFGVMLLEIISCRCVERQG----  201 (266)
Q Consensus       129 li~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~i~~~l~tg~~p~~~~----  201 (266)
                      +++.++.++|+|||++...... ........||+.|+|||++.+..   .+.++||||||+++|+|++|+.||...    
T Consensus       169 l~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  247 (298)
T 2zv2_A          169 LVGEDGHIKIADFGVSNEFKGS-DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC  247 (298)
T ss_dssp             EECTTSCEEECCCTTCEECSSS-SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EECCCCCEEEecCCCccccccc-cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence            9999999999999999876432 22234467899999999987655   377899999999999999999998652    


Q ss_pred             -------------CCccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          202 -------------SDPKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       202 -------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                   ..+.....+.+++.+||+.||.+||++.++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          248 LHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence                         12345677889999999999999999999874


No 84 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=9.3e-38  Score=268.89  Aligned_cols=207  Identities=18%  Similarity=0.226  Sum_probs=174.0

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      ++|.+.+.||+|+||.||+|.++ .++..||+|.+.                .+++.++||||+++++++.+.+..++||
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEEC-CCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            36999999999999999999976 678899999763                3778899999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCC---CEEEEeecCcceeecccccc
Q 042690           88 KFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDY---FTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~---~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      ||+.+++|.+++.....+.      +..++..++.++|..+++|+     ||+++.+   +.+||+|||++.....  ..
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~--~~  185 (362)
T 2bdw_A          108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND--SE  185 (362)
T ss_dssp             CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT--CC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC--Cc
Confidence            9999999999998665544      44566677788888888887     8999865   4599999999987542  22


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC---------------C----ccccchHHHHH
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------D----PKTLEKPVMIA  214 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------~----~~~~~~~~~l~  214 (266)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|..||....               +    ......+.+++
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  265 (362)
T 2bdw_A          186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI  265 (362)
T ss_dssp             SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHH
T ss_pred             ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHH
Confidence            2334678999999999998889999999999999999999999986521               1    13456788999


Q ss_pred             HHhhhcCCCCCCCHHHHHH
Q 042690          215 IQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~  233 (266)
                      .+||+.||.+||++.++++
T Consensus       266 ~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          266 DSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             HHHSCSSGGGSCCHHHHTT
T ss_pred             HHHcCCChhhCcCHHHHhc
Confidence            9999999999999999874


No 85 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=1.6e-37  Score=275.77  Aligned_cols=209  Identities=15%  Similarity=0.209  Sum_probs=177.4

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ..++|.+.+.||+|+||.||+|.+. .+++.||+|++.                 .+++.++||||+++++++.+.+..+
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~-~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~   92 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHE-LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIF   92 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEET-TTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            3568999999999999999999986 678899999763                 2677889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      +||||+++++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.+||+|||++.....  ..
T Consensus        93 lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~--~~  170 (476)
T 2y94_A           93 MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GE  170 (476)
T ss_dssp             EEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCT--TC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccc--cc
Confidence            9999999999999998766554      44566677788888888877     99999999999999999987642  22


Q ss_pred             ccccccCCCCcCCccccCCCCC-CcccchhhHHHHHHHHHhCCCcccCCC---------------CccccchHHHHHHHh
Q 042690          154 TLTGMRETKGYLPPEWFRNMPV-TVKVDVYSFGVMLLEIISCRCVERQGS---------------DPKTLEKPVMIAIQF  217 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~i~~~l~tg~~p~~~~~---------------~~~~~~~~~~l~~~c  217 (266)
                      ......||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||....               +......+.+++.+|
T Consensus       171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li~~~  250 (476)
T 2y94_A          171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHM  250 (476)
T ss_dssp             CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHHHHHH
T ss_pred             cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHHHHHH
Confidence            3344678999999999988765 689999999999999999999997622               233456788999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q 042690          218 VKEKPPLRPSLRIVAL  233 (266)
Q Consensus       218 l~~~p~~Rps~~~il~  233 (266)
                      |+.||.+||+++++++
T Consensus       251 L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          251 LQVDPMKRATIKDIRE  266 (476)
T ss_dssp             TCSSTTTSCCHHHHHT
T ss_pred             cCCCchhCcCHHHHHh
Confidence            9999999999999986


No 86 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=1.7e-37  Score=257.74  Aligned_cols=209  Identities=20%  Similarity=0.253  Sum_probs=173.9

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .+++|.+.+.||+|+||.||+|.+. .++..+|+|.+.                 .+++.++||||+++++++.+.+..+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY   85 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEc-cCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence            3568999999999999999999986 677889999753                 3677889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      +||||+++++|.+++.....+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++.....   .
T Consensus        86 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~---~  162 (279)
T 3fdn_A           86 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---S  162 (279)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC------
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc---c
Confidence            9999999999999998766544      44566677788888888776     89999999999999999865432   2


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhh
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl  218 (266)
                      ......++..|+|||.+.+..++.++||||||+++|+|++|..||...               .+......+.+++.+||
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  242 (279)
T 3fdn_A          163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL  242 (279)
T ss_dssp             -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHC
T ss_pred             cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHh
Confidence            223456899999999999888999999999999999999999999752               23335567889999999


Q ss_pred             hcCCCCCCCHHHHHHH
Q 042690          219 KEKPPLRPSLRIVALM  234 (266)
Q Consensus       219 ~~~p~~Rps~~~il~~  234 (266)
                      +.||.+||+++++++.
T Consensus       243 ~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          243 KHNPSQRPMLREVLEH  258 (279)
T ss_dssp             CSSGGGSCCHHHHHHC
T ss_pred             ccChhhCCCHHHHhhC
Confidence            9999999999999964


No 87 
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=4.7e-37  Score=261.85  Aligned_cols=208  Identities=16%  Similarity=0.187  Sum_probs=175.2

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------------HHhhhcCCCceeeeeeEEEeCC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------------KVVHVAHHKNLVCLLGYHIEQE   81 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------------~~l~~~~h~~iv~~~~~~~~~~   81 (266)
                      .+|.+.+.||+|+||.||+|.+. .++..||+|.+.                      .+++.++||||+++++++.+.+
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDK-EKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEET-TTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             cceEEEeEEEecCCEEEEEEEEC-CCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            47999999999999999999976 678889998643                      4788899999999999999999


Q ss_pred             eEEEEEEcCCCC-CHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           82 CRLLVYKFMHNR-SISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        82 ~~~lv~e~~~~~-~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                      ..++||||+.+| +|.+++.....+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++.....
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  182 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER  182 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence            999999999776 9999998766655      44556666788887777776     99999999999999999987643


Q ss_pred             ccccccccccCCCCcCCccccCCCCC-CcccchhhHHHHHHHHHhCCCcccC---------CCCccccchHHHHHHHhhh
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRNMPV-TVKVDVYSFGVMLLEIISCRCVERQ---------GSDPKTLEKPVMIAIQFVK  219 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~i~~~l~tg~~p~~~---------~~~~~~~~~~~~l~~~cl~  219 (266)
                      .  .......||+.|+|||++.+..+ +.++||||||+++|+|++|..||..         ..+......+.+++.+||+
T Consensus       183 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  260 (335)
T 3dls_A          183 G--KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQ  260 (335)
T ss_dssp             T--CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCSSCCCHHHHHHHHHHTC
T ss_pred             C--CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccCCCcccCHHHHHHHHHHcc
Confidence            2  22334568999999999988776 7899999999999999999999965         2233456788999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 042690          220 EKPPLRPSLRIVALM  234 (266)
Q Consensus       220 ~~p~~Rps~~~il~~  234 (266)
                      .||.+||+++++++.
T Consensus       261 ~dP~~Rps~~ell~h  275 (335)
T 3dls_A          261 PVPERRTTLEKLVTD  275 (335)
T ss_dssp             SSGGGSCCHHHHHHC
T ss_pred             CChhhCcCHHHHhcC
Confidence            999999999999874


No 88 
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1.6e-37  Score=261.61  Aligned_cols=223  Identities=17%  Similarity=0.251  Sum_probs=171.0

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      ..+++|.+.+.||+|+||.||+|... .++..||+|++.                 .+++.++||||+++++++...+..
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  107 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACL-LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL  107 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEET-TTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             ccccceEEEEeecCCCCceEEEEEEc-CCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence            34678999999999999999999975 578899999653                 377788999999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhc----CCC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeec
Q 042690           84 LLVYKFMHNRSISSLLYEC----LRP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLM  148 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~----~~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~  148 (266)
                      ++||||+.+++|.+++...    ..+      .+..++..++.++|..+++|+     ||+++.++.++|+|||++....
T Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            9999999999999999742    223      344566667788888887776     8999999999999999998654


Q ss_pred             cccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC-------------------Cccccch
Q 042690          149 INQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS-------------------DPKTLEK  209 (266)
Q Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-------------------~~~~~~~  209 (266)
                      .. ........++..|+|||.+.+..++.++||||||+++|+|++|+.||....                   .......
T Consensus       188 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (310)
T 2wqm_A          188 SK-TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE  266 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHH
T ss_pred             CC-CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHH
Confidence            22 222234568999999999998889999999999999999999999986421                   1234567


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCCCC
Q 042690          210 PVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSPP  245 (266)
Q Consensus       210 ~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~~~  245 (266)
                      +.+++.+||+.||.+||+++++++.|+.+.....++
T Consensus       267 l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~  302 (310)
T 2wqm_A          267 LRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS  302 (310)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence            889999999999999999999999999997655443


No 89 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=1.9e-37  Score=265.68  Aligned_cols=206  Identities=15%  Similarity=0.135  Sum_probs=165.2

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEcCCC
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHN   92 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   92 (266)
                      .|.+.+.||+|+||.||+|.+. .++..||+|.+.            .+++.++||||+++++++...+..++||||+++
T Consensus        54 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  132 (349)
T 2w4o_A           54 FFEVESELGRGATSIVYRCKQK-GTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG  132 (349)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             cEEEeeEEeeCCCEEEEEEEEC-CCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence            5899999999999999999986 667889999764            478899999999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecC---CCEEEEeecCcceeeccccccccccc
Q 042690           93 RSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHD---YFTVETSDLGLAKLLMINQTQTLTGM  158 (266)
Q Consensus        93 ~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~---~~~~~l~Dfg~a~~~~~~~~~~~~~~  158 (266)
                      ++|.+++.....++      +..++..++.++|..+++|+     ||+++.   ++.++|+|||++.....  .......
T Consensus       133 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~  210 (349)
T 2w4o_A          133 GELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH--QVLMKTV  210 (349)
T ss_dssp             CBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc--ccccccc
Confidence            99999998765544      44556666788888887776     899975   88999999999986542  2222345


Q ss_pred             cCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC--------------------ccccchHHHHHHHhh
Q 042690          159 RETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD--------------------PKTLEKPVMIAIQFV  218 (266)
Q Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~--------------------~~~~~~~~~l~~~cl  218 (266)
                      .||+.|+|||.+.+..++.++|||||||++|+|++|..||.....                    ......+.+++.+||
T Consensus       211 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  290 (349)
T 2w4o_A          211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLI  290 (349)
T ss_dssp             --CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTS
T ss_pred             cCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHc
Confidence            689999999999988899999999999999999999999865221                    234557789999999


Q ss_pred             hcCCCCCCCHHHHHH
Q 042690          219 KEKPPLRPSLRIVAL  233 (266)
Q Consensus       219 ~~~p~~Rps~~~il~  233 (266)
                      +.||.+||++.++++
T Consensus       291 ~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          291 VLDPKKRLTTFQALQ  305 (349)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             cCChhhCcCHHHHhc
Confidence            999999999999886


No 90 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=1.5e-37  Score=259.68  Aligned_cols=208  Identities=18%  Similarity=0.234  Sum_probs=169.2

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      +++|.+.+.||+|+||+||+|.++ .+++.||+|++.                .+++.++||||+++++++.+++..++|
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   79 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNR-ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCceeeeEecCCCCeEEEEEEEC-CCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence            368999999999999999999986 678889999764                377788999999999999999999999


Q ss_pred             EEcCCCCCHHHHHhh-cCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           87 YKFMHNRSISSLLYE-CLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~-~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      |||+.+ ++.+++.. ...++      +..++..++.++|..+++|+     ||+++.++.++|+|||++..... ....
T Consensus        80 ~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~-~~~~  157 (292)
T 3o0g_A           80 FEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRC  157 (292)
T ss_dssp             EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS-CCSC
T ss_pred             EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCC-cccc
Confidence            999986 66666654 33433      44566677788888888877     99999999999999999987542 2233


Q ss_pred             cccccCCCCcCCccccCCCC-CCcccchhhHHHHHHHHHhCCCcccCCCC------------------------------
Q 042690          155 LTGMRETKGYLPPEWFRNMP-VTVKVDVYSFGVMLLEIISCRCVERQGSD------------------------------  203 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~i~~~l~tg~~p~~~~~~------------------------------  203 (266)
                      .....+|+.|+|||.+.+.. ++.++||||||+++|+|++|..|+.....                              
T Consensus       158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T 3o0g_A          158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence            34567899999999887665 79999999999999999998887533111                              


Q ss_pred             ---------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ---------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ---------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                     +.....+.+++.+||+.||.+|||++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence                           123456679999999999999999999885


No 91 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=2.3e-37  Score=262.98  Aligned_cols=210  Identities=14%  Similarity=0.128  Sum_probs=172.0

Q ss_pred             cCceeeeeccCCCcceEEEEEEEc--CCCcceeeeeeHH------------------HHhhhcCCCceeeeeeEEEeCCe
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLA--PGDKTNIGVKKLD------------------KVVHVAHHKNLVCLLGYHIEQEC   82 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~--~~~~~~vaiK~~~------------------~~l~~~~h~~iv~~~~~~~~~~~   82 (266)
                      .++|.+.+.||+|+||.||++...  ..++..+|+|.+.                  .+++.++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            468999999999999999999974  2478889998753                  37888999999999999999999


Q ss_pred             EEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           83 RLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      .++||||+++++|.+++.....+.      +..++..++.++|..+++|+     ||+++.++.+||+|||+++..... 
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-  174 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD-  174 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred             EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccC-
Confidence            999999999999999998765544      44566677788888888887     899999999999999999764322 


Q ss_pred             ccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHH
Q 042690          152 TQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQ  216 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~  216 (266)
                      ........||+.|+|||++.+..++.++|+||||+++|+|++|+.||...               .++.....+.+++.+
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  254 (327)
T 3a62_A          175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKK  254 (327)
T ss_dssp             ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHH
T ss_pred             CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            22233456899999999998888999999999999999999999999752               234456778899999


Q ss_pred             hhhcCCCCCC-----CHHHHHH
Q 042690          217 FVKEKPPLRP-----SLRIVAL  233 (266)
Q Consensus       217 cl~~~p~~Rp-----s~~~il~  233 (266)
                      ||+.||.+||     +++++++
T Consensus       255 ~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          255 LLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HHhcCHhhccCCCCCCHHHHHc
Confidence            9999999999     6777764


No 92 
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1e-37  Score=264.04  Aligned_cols=226  Identities=18%  Similarity=0.250  Sum_probs=180.2

Q ss_pred             CCchhhhhhHhcccCceeeeeccCCCcceEEEEEEEc---CCCcceeeeeeHH---------------HHhhhcCCCcee
Q 042690           10 ADPSQYENRVFGSFSHIYSLKKPCGGSFSTVYTGVLA---PGDKTNIGVKKLD---------------KVVHVAHHKNLV   71 (266)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~---~~~~~~vaiK~~~---------------~~l~~~~h~~iv   71 (266)
                      -+|..+..+      .|.+.+.||+|+||+||++.++   ..+++.||+|++.               ++++.++||||+
T Consensus        23 g~~~~~~~r------~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   96 (318)
T 3lxp_A           23 GDPTVFHKR------YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII   96 (318)
T ss_dssp             -CCCBCCGG------GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCceecHH------HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchh
Confidence            355555552      4689999999999999998753   2478889999764               377889999999


Q ss_pred             eeeeEEEeC--CeEEEEEEcCCCCCHHHHHhhcCC-----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEe
Q 042690           72 CLLGYHIEQ--ECRLLVYKFMHNRSISSLLYECLR-----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETS  139 (266)
Q Consensus        72 ~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~  139 (266)
                      ++++++.+.  ...++||||+++++|.+++....-     ..+..++..++..+|..+++|+     ||+++.++.++|+
T Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~  176 (318)
T 3lxp_A           97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIG  176 (318)
T ss_dssp             CEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             hEEEEEecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEEC
Confidence            999999874  578999999999999999976431     2344566667788887777776     9999999999999


Q ss_pred             ecCcceeeccccc--cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccC-----------------
Q 042690          140 DLGLAKLLMINQT--QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ-----------------  200 (266)
Q Consensus       140 Dfg~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~-----------------  200 (266)
                      |||++........  .......++..|+|||.+.+..++.++||||||+++|+|+||..||..                 
T Consensus       177 Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~  256 (318)
T 3lxp_A          177 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT  256 (318)
T ss_dssp             CGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHH
T ss_pred             CccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchh
Confidence            9999987643222  122335577889999999888889999999999999999999988854                 


Q ss_pred             --------------CCCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          201 --------------GSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       201 --------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                                    ..+......+.+++.+||+.||.+||+++++++.|+.+.+.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  311 (318)
T 3lxp_A          257 VLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK  311 (318)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence                          12334566789999999999999999999999999988654


No 93 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=2.8e-37  Score=260.21  Aligned_cols=216  Identities=21%  Similarity=0.289  Sum_probs=169.9

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      -..++|.+.+.||+|+||.||+|.+.    ..+++|.+.                .+++.++||||+++++++. .+..+
T Consensus        33 i~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~  107 (307)
T 3lb7_A           33 IEASEVMLSTRIGSGSFGTVYKGKWH----GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLA  107 (307)
T ss_dssp             CCTTSCCEEEEEEECSSCEEEEEESS----SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred             ecccceEEEeEecCCCCeEEEEEEEC----CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEE
Confidence            45678999999999999999999864    235555433                4778899999999999864 45588


Q ss_pred             EEEEcCCCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccc-c
Q 042690           85 LVYKFMHNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMIN-Q  151 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~-~  151 (266)
                      +||||+++++|.+++... ..++      +..++..++.++|..+++|+     ||+++.++.++|+|||++...... .
T Consensus       108 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~  187 (307)
T 3lb7_A          108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred             EEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence            999999999999999743 3333      44566677788888888877     899999999999999999764321 2


Q ss_pred             ccccccccCCCCcCCccccC---CCCCCcccchhhHHHHHHHHHhCCCcccCCCC---------------------cccc
Q 042690          152 TQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSFGVMLLEIISCRCVERQGSD---------------------PKTL  207 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~---------------------~~~~  207 (266)
                      ........||+.|+|||++.   +..++.++||||||+++|+|++|+.||.....                     ....
T Consensus       188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (307)
T 3lb7_A          188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCP  267 (307)
T ss_dssp             ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSC
T ss_pred             cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCc
Confidence            22333457899999999875   56788999999999999999999999975211                     2345


Q ss_pred             chHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          208 EKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       208 ~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      ..+.+++.+||+.+|.+||++.++++.|+.+...
T Consensus       268 ~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~  301 (307)
T 3lb7_A          268 KAMKRLVADCVKKVKEERPLFPQILSSIELLQHS  301 (307)
T ss_dssp             HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence            6788999999999999999999999999988764


No 94 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=5.4e-38  Score=266.43  Aligned_cols=209  Identities=16%  Similarity=0.244  Sum_probs=169.3

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCC-------
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQE-------   81 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~-------   81 (266)
                      ++|.+.+.||+|+||.||+|.++ .++..||+|++.               .+++.++||||+++++++.+..       
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNK-VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEET-TTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEc-CCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            47899999999999999999986 678899999764               3788899999999999986543       


Q ss_pred             --------------------------------------------------eEEEEEEcCCCCCHHHHHhhcCC-------
Q 042690           82 --------------------------------------------------CRLLVYKFMHNRSISSLLYECLR-------  104 (266)
Q Consensus        82 --------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~-------  104 (266)
                                                                        ..++||||+++++|.+++.....       
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                              27899999999999999986543       


Q ss_pred             --CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc-----------cccccccCCCCcCC
Q 042690          105 --PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT-----------QTLTGMRETKGYLP  166 (266)
Q Consensus       105 --~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~-----------~~~~~~~~~~~y~a  166 (266)
                        ..+..++..++.++|..+++|+     ||+++.++.++|+|||++........           .......||+.|+|
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  244 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS  244 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence              2355677778888888888887     99999999999999999987653321           12234568999999


Q ss_pred             ccccCCCCCCcccchhhHHHHHHHHHhCCCcccC----------CC-C---ccccchHHHHHHHhhhcCCCCCCCHHHHH
Q 042690          167 PEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ----------GS-D---PKTLEKPVMIAIQFVKEKPPLRPSLRIVA  232 (266)
Q Consensus       167 PE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~----------~~-~---~~~~~~~~~l~~~cl~~~p~~Rps~~~il  232 (266)
                      ||++.+..++.++||||||+++|+|++|..|+..          .. +   ......+.+++.+||+.||.+||++++++
T Consensus       245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l  324 (332)
T 3qd2_B          245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDII  324 (332)
T ss_dssp             HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHH
T ss_pred             hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHh
Confidence            9999988999999999999999999998876643          11 1   22345667899999999999999999998


Q ss_pred             H
Q 042690          233 L  233 (266)
Q Consensus       233 ~  233 (266)
                      +
T Consensus       325 ~  325 (332)
T 3qd2_B          325 E  325 (332)
T ss_dssp             H
T ss_pred             h
Confidence            5


No 95 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=2.7e-37  Score=268.42  Aligned_cols=215  Identities=16%  Similarity=0.100  Sum_probs=176.3

Q ss_pred             HhcccCceeeeeccCCC--cceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeC
Q 042690           19 VFGSFSHIYSLKKPCGG--SFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQ   80 (266)
Q Consensus        19 ~~~~~~~~~~~~~ig~G--~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~   80 (266)
                      +.++.++|.+.+.||+|  +||.||+|.+. .++..||+|++.                .+++.++||||+++++++.++
T Consensus        20 ~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   98 (389)
T 3gni_B           20 FLPEGGCYELLTVIGKGFEDLMTVNLARYK-PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD   98 (389)
T ss_dssp             CCCCGGGEEEEEEEEEETTTTEEEEEEEET-TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             ccCCCCcEEEEecccCCcCCceEEEEEEEc-CCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC
Confidence            44567899999999999  99999999986 678899999764                377889999999999999999


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhc--CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceee
Q 042690           81 ECRLLVYKFMHNRSISSLLYEC--LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLL  147 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~--~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~  147 (266)
                      +..++||||+++++|.+++...  ..+.      +..++..++.++|..+++|+     ||+++.++.++|+|||.+...
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B           99 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             CEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            9999999999999999999764  3333      44566677788888888887     999999999999999998764


Q ss_pred             ccccc------cccccccCCCCcCCccccCC--CCCCcccchhhHHHHHHHHHhCCCcccCCCC----------------
Q 042690          148 MINQT------QTLTGMRETKGYLPPEWFRN--MPVTVKVDVYSFGVMLLEIISCRCVERQGSD----------------  203 (266)
Q Consensus       148 ~~~~~------~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~----------------  203 (266)
                      .....      .......||..|+|||++.+  ..++.++|||||||++|+|++|+.||.....                
T Consensus       179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  258 (389)
T 3gni_B          179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL  258 (389)
T ss_dssp             EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred             ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence            32111      11122468899999999887  5789999999999999999999999975211                


Q ss_pred             ---------------------------------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          204 ---------------------------------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       204 ---------------------------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                                                                   ......+.+++.+||+.||.+|||++++++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence                                                         1133457789999999999999999999853


No 96 
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=2.2e-37  Score=257.19  Aligned_cols=217  Identities=18%  Similarity=0.238  Sum_probs=178.2

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------HHhhhcCCCceeeeeeEEEe---------------
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------KVVHVAHHKNLVCLLGYHIE---------------   79 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------~~l~~~~h~~iv~~~~~~~~---------------   79 (266)
                      +|.+.+.||+|+||.||+|.+. .+++.||+|.+.          ++++.++||||+++++++..               
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~   90 (284)
T 2a19_B           12 DFKEIELIGSGGFGQVFKAKHR-IDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS   90 (284)
T ss_dssp             HEEEEEEEECSSSCCEEEEEET-TTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred             ccceeeeeccCCceEEEEEEEc-CCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence            7899999999999999999985 578899999764          47889999999999998864               


Q ss_pred             -CCeEEEEEEcCCCCCHHHHHhhc--CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcce
Q 042690           80 -QECRLLVYKFMHNRSISSLLYEC--LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAK  145 (266)
Q Consensus        80 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~  145 (266)
                       ....++||||+++++|.+++...  ..++      +..++..++.++|..+++|+     ||+++.++.++|+|||++.
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  170 (284)
T 2a19_B           91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT  170 (284)
T ss_dssp             EEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             CcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhhe
Confidence             34579999999999999999754  3333      44566667788888877776     8999999999999999998


Q ss_pred             eeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccC-----------CCCccccchHHHHH
Q 042690          146 LLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ-----------GSDPKTLEKPVMIA  214 (266)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~-----------~~~~~~~~~~~~l~  214 (266)
                      .....  .......+++.|+|||.+.+..++.++||||||+++|+|++|..|+..           ..+......+.+++
T Consensus       171 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  248 (284)
T 2a19_B          171 SLKND--GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLL  248 (284)
T ss_dssp             ESSCC--SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTTSCHHHHHHH
T ss_pred             ecccc--ccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcccccccCCHHHHHHH
Confidence            76432  223345689999999999888899999999999999999999987743           22344566788999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHhCCCC
Q 042690          215 IQFVKEKPPLRPSLRIVALMLQSILEVPSP  244 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~~l~~~~~~~~~  244 (266)
                      .+||+.||.+||++.++++.|..+...++.
T Consensus       249 ~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~  278 (284)
T 2a19_B          249 QKLLSKKPEDRPNTSEILRTLTVWKKSPEK  278 (284)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred             HHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence            999999999999999999999999876553


No 97 
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=1.3e-37  Score=265.04  Aligned_cols=221  Identities=18%  Similarity=0.227  Sum_probs=179.5

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcC------CCcceeeeeeHH---------------HHhhhc-CCCceeeeeeEEEe
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAP------GDKTNIGVKKLD---------------KVVHVA-HHKNLVCLLGYHIE   79 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~------~~~~~vaiK~~~---------------~~l~~~-~h~~iv~~~~~~~~   79 (266)
                      ..++|.+.+.||+|+||.||+|.+..      .++..||+|++.               .+++.+ +||||+++++++..
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            34689999999999999999999742      356789999764               256677 89999999999999


Q ss_pred             CCeEEEEEEcCCCCCHHHHHhhcCC----------------CC------HHHHHHHHHHHhhhcCcccc-----ceeecC
Q 042690           80 QECRLLVYKFMHNRSISSLLYECLR----------------PT------WQQRMQDCIRDCWRTRALAC-----RILLHD  132 (266)
Q Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~----------------~~------~~~~l~~~~~~~~~~~~~h~-----nili~~  132 (266)
                      .+..++||||+++++|.+++.....                +.      +..++..++.++|..+++|+     ||+++.
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  192 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE  192 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcC
Confidence            9999999999999999999986432                22      34566677788888877776     899999


Q ss_pred             CCEEEEeecCcceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC---------
Q 042690          133 YFTVETSDLGLAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG---------  201 (266)
Q Consensus       133 ~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~---------  201 (266)
                      ++.++|+|||++......... ......+++.|+|||++.+..++.++||||||+++|+|++ |..||...         
T Consensus       193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~  272 (334)
T 2pvf_A          193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL  272 (334)
T ss_dssp             TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHH
Confidence            999999999999876432221 2233456788999999888888999999999999999999 88888652         


Q ss_pred             -------CCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          202 -------SDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       202 -------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                             .+......+.+++.+||+.||.+||+++++++.|+.+....
T Consensus       273 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          273 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             hcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence                   23345567889999999999999999999999999996643


No 98 
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=8.7e-38  Score=259.38  Aligned_cols=219  Identities=22%  Similarity=0.310  Sum_probs=179.7

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      -..++|.+.+.||+|+||.||+|.+.  ++..||+|.+.             ++++.++||||+++++++. .+..++||
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   86 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT   86 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET--TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEc--CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEE
Confidence            34568999999999999999999974  56789999764             3788899999999999876 45588999


Q ss_pred             EcCCCCCHHHHHhhcC--CC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           88 KFMHNRSISSLLYECL--RP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~--~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      ||+++++|.+++....  .+      .+..++..++.++|..+++|+     ||+++.++.++|+|||++..........
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  166 (279)
T 1qpc_A           87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA  166 (279)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence            9999999999997532  33      344566667788888887776     8999999999999999998765433333


Q ss_pred             cccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCCC----------------CccccchHHHHHHHh
Q 042690          155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQGS----------------DPKTLEKPVMIAIQF  217 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~~----------------~~~~~~~~~~l~~~c  217 (266)
                      .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||....                +......+.+++.+|
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  246 (279)
T 1qpc_A          167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLC  246 (279)
T ss_dssp             CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHH
Confidence            334556788999999988788999999999999999999 888886521                234456788999999


Q ss_pred             hhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          218 VKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       218 l~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                      |+.||.+||+++++++.|+.+....
T Consensus       247 l~~~p~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          247 WKERPEDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             hccChhhCCCHHHHHHHHHHHHHhc
Confidence            9999999999999999999986543


No 99 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=1.7e-37  Score=256.12  Aligned_cols=210  Identities=17%  Similarity=0.240  Sum_probs=173.0

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeC--CeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQ--ECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~--~~~   83 (266)
                      ++++|.+.+.||+|+||.||+|.+   .+..+|+|.+.                .+++.++||||+++++++.+.  ...
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   84 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRW---QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP   84 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEE---TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSC
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEE---CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCe
Confidence            467899999999999999999997   47788998764                266778999999999999876  678


Q ss_pred             EEEEEcCCCCCHHHHHhhcCC--CC------HHHHHHHHHHHhhhcC--cccc-----ceeecCCCEEEEeecCcceeec
Q 042690           84 LLVYKFMHNRSISSLLYECLR--PT------WQQRMQDCIRDCWRTR--ALAC-----RILLHDYFTVETSDLGLAKLLM  148 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~--~~------~~~~l~~~~~~~~~~~--~~h~-----nili~~~~~~~l~Dfg~a~~~~  148 (266)
                      ++||||+++++|.+++.....  ++      +..++..++.++|..+  ++|+     ||+++.++.++++|||++....
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~  164 (271)
T 3kmu_A           85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ  164 (271)
T ss_dssp             EEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred             EeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence            999999999999999986543  33      3455666667888777  7776     9999999999999998875421


Q ss_pred             cccccccccccCCCCcCCccccCCCCCCc---ccchhhHHHHHHHHHhCCCcccC-----------------CCCccccc
Q 042690          149 INQTQTLTGMRETKGYLPPEWFRNMPVTV---KVDVYSFGVMLLEIISCRCVERQ-----------------GSDPKTLE  208 (266)
Q Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~i~~~l~tg~~p~~~-----------------~~~~~~~~  208 (266)
                            .....+|+.|+|||.+.+..++.   ++||||||+++|+|++|+.||..                 ..+.....
T Consensus       165 ------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (271)
T 3kmu_A          165 ------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP  238 (271)
T ss_dssp             ------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCH
T ss_pred             ------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCH
Confidence                  22356789999999988765444   79999999999999999999965                 12334567


Q ss_pred             hHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          209 KPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      .+.+++.+||+.||.+||+++++++.|+.+.+
T Consensus       239 ~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          239 HVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            88899999999999999999999999998754


No 100
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=2.8e-37  Score=256.65  Aligned_cols=218  Identities=18%  Similarity=0.197  Sum_probs=173.8

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcC--CCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAP--GDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~--~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ..++|.+.+.||+|+||.||+|.+..  +.+..||+|.+.               .+++.++||||+++++++.. +..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            34689999999999999999999752  345568998754               36778899999999999764 4568


Q ss_pred             EEEEcCCCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           85 LVYKFMHNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      +||||+.+++|.+++..... ++      +..++..++.++|.++++|+     ||+++.++.++|+|||++........
T Consensus        89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  168 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY  168 (281)
T ss_dssp             EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred             EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence            99999999999999976432 33      34566667788888888877     89999999999999999987653333


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHH
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAI  215 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~  215 (266)
                      .......+++.|+|||.+.+..++.++||||||+++|+|+| |+.||...                .+......+.+++.
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  248 (281)
T 3cc6_A          169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMT  248 (281)
T ss_dssp             ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHHHH
T ss_pred             cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence            33334556788999999988889999999999999999998 99998541                22334567889999


Q ss_pred             HhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          216 QFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       216 ~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      +||+.||.+||++.++++.|+.+..
T Consensus       249 ~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          249 RCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHccCCchhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999998754


No 101
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.2e-37  Score=260.84  Aligned_cols=209  Identities=18%  Similarity=0.219  Sum_probs=167.7

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      +++|.+.+.||+|+||.||+|.+. .++..||+|++.                .+++.++||||+++++++...+..++|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNR-DTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV   80 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeC-CCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence            357999999999999999999986 568899999652                478889999999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           87 YKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      |||+.+++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.++|+|||++...... ....
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~  159 (311)
T 4agu_A           81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP-SDYY  159 (311)
T ss_dssp             EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred             EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc-cccc
Confidence            99999999999987665544      34556667788888887776     899999999999999999875422 2223


Q ss_pred             ccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------------------
Q 042690          156 TGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------------------  203 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------------------  203 (266)
                      ....+|..|+|||.+.+ ..++.++||||||+++|+|++|+.||.....                               
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (311)
T 4agu_A          160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV  239 (311)
T ss_dssp             ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred             CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence            34568999999998875 5689999999999999999999999865221                               


Q ss_pred             ---------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ---------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ---------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                     +.....+.+++.+||+.||.+|||++++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence                           123445778999999999999999999985


No 102
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=1.6e-37  Score=263.15  Aligned_cols=222  Identities=19%  Similarity=0.257  Sum_probs=166.9

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCc--ceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDK--TNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~--~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      ...+|.+.+.||+|+||.||+|.+....+  ..||+|.+.                .+++.++||||+++++++......
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence            44689999999999999999999752222  278999764                367788999999999999876654


Q ss_pred             ------EEEEEcCCCCCHHHHHhhcC------CC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEee
Q 042690           84 ------LLVYKFMHNRSISSLLYECL------RP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSD  140 (266)
Q Consensus        84 ------~lv~e~~~~~~L~~~l~~~~------~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~D  140 (266)
                            ++||||+.+++|.+++....      .+      .+..++..++.++|..+++|+     ||+++.++.++|+|
T Consensus       101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~D  180 (323)
T 3qup_A          101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVAD  180 (323)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECC
T ss_pred             cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEee
Confidence                  89999999999999996432      23      345566677788888888877     89999999999999


Q ss_pred             cCcceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccC----------------CC
Q 042690          141 LGLAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQ----------------GS  202 (266)
Q Consensus       141 fg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~----------------~~  202 (266)
                      ||++......... ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||..                ..
T Consensus       181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~  260 (323)
T 3qup_A          181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQ  260 (323)
T ss_dssp             CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC
T ss_pred             ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCC
Confidence            9999875432222 2223456778999999988889999999999999999999 8888865                22


Q ss_pred             CccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          203 DPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       203 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                      ++.....+.+++.+||+.||.+||++.++++.|+.+...+.
T Consensus       261 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~  301 (323)
T 3qup_A          261 PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS  301 (323)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence            34456788899999999999999999999999999987764


No 103
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2e-37  Score=258.62  Aligned_cols=207  Identities=19%  Similarity=0.268  Sum_probs=166.4

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      +++|.+.+.||+|+||.||+|.+  .+++.+|+|++.                .+++.++||||+++++++.+.+..++|
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   78 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQN--NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLV   78 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEE--TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEE
T ss_pred             CccchhhhhcccCCCEEEEEEEc--CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEE
Confidence            36899999999999999999998  467889999763                377888999999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           87 YKFMHNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      |||+.+ +|.+++... ..++      +..++..++.++|..+++|+     ||+++.++.+||+|||++...... ...
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~  156 (288)
T 1ob3_A           79 FEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP-VRK  156 (288)
T ss_dssp             EECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             EEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc-ccc
Confidence            999986 999998754 3333      44567777788888888887     899999999999999999765321 222


Q ss_pred             cccccCCCCcCCccccCCC-CCCcccchhhHHHHHHHHHhCCCcccCCCC------------------------------
Q 042690          155 LTGMRETKGYLPPEWFRNM-PVTVKVDVYSFGVMLLEIISCRCVERQGSD------------------------------  203 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~i~~~l~tg~~p~~~~~~------------------------------  203 (266)
                      .....+|+.|+|||++.+. .++.++||||||+++|+|++|+.||.....                              
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP  236 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccc
Confidence            2345679999999988754 589999999999999999999999864210                              


Q ss_pred             --------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 --------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 --------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                    ......+.+++.+||+.||.+||+++++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                          123456678999999999999999999875


No 104
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.1e-37  Score=259.85  Aligned_cols=211  Identities=18%  Similarity=0.277  Sum_probs=167.6

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEc
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKF   89 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   89 (266)
                      ++++|.+.+.||+|+||.||++.+   .+..||+|.+.            .+++.++||||+++++++.  +..++||||
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~   80 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKW---RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY   80 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEE---TTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred             CHhHeeeeeEeecCCCceEEEEEE---CCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence            567899999999999999999997   46789999874            3778889999999999876  347899999


Q ss_pred             CCCCCHHHHHhhcCC---C------CHHHHHHHHHHHhhh---cCcccc-----ceeecCCCE-EEEeecCcceeecccc
Q 042690           90 MHNRSISSLLYECLR---P------TWQQRMQDCIRDCWR---TRALAC-----RILLHDYFT-VETSDLGLAKLLMINQ  151 (266)
Q Consensus        90 ~~~~~L~~~l~~~~~---~------~~~~~l~~~~~~~~~---~~~~h~-----nili~~~~~-~~l~Dfg~a~~~~~~~  151 (266)
                      +++++|.+++.....   +      .+..++..++.++|.   .+++|+     ||+++.++. +||+|||++.....  
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~--  158 (307)
T 2eva_A           81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT--  158 (307)
T ss_dssp             CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred             CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc--
Confidence            999999999986543   2      233455566777777   667776     899988875 79999999976432  


Q ss_pred             ccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------CccccchHHHH
Q 042690          152 TQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLEKPVMI  213 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~~~~~l  213 (266)
                        ......||..|+|||++.+..++.++||||||+++|+|++|+.||....                  .......+.++
T Consensus       159 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  236 (307)
T 2eva_A          159 --HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL  236 (307)
T ss_dssp             --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHH
T ss_pred             --ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHH
Confidence              1223458999999999998889999999999999999999999986421                  12345677899


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          214 AIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       214 ~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      +.+||+.||.+||+++++++.|+.+.+.
T Consensus       237 i~~~l~~dp~~Rps~~ell~~L~~~~~~  264 (307)
T 2eva_A          237 MTRCWSKDPSQRPSMEEIVKIMTHLMRY  264 (307)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred             HHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            9999999999999999999999998653


No 105
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.9e-37  Score=270.87  Aligned_cols=211  Identities=17%  Similarity=0.121  Sum_probs=174.9

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      -..++|.+.+.||+|+||.||++.++ .+++.||+|++.                 .++..++||||+++++++.+.+..
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~-~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~  136 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMK-QTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL  136 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence            34578999999999999999999986 678899999764                 266788999999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           84 LLVYKFMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      |+||||+++|+|.+++.... .+.      +..++..++.++|.++++|+     ||+++.+|.+||+|||+++......
T Consensus       137 ~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~  216 (412)
T 2vd5_A          137 YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG  216 (412)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCC
Confidence            99999999999999998643 443      44566677788888888887     9999999999999999998765433


Q ss_pred             ccccccccCCCCcCCccccC-------CCCCCcccchhhHHHHHHHHHhCCCcccCCC-----------------C---c
Q 042690          152 TQTLTGMRETKGYLPPEWFR-------NMPVTVKVDVYSFGVMLLEIISCRCVERQGS-----------------D---P  204 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-----------------~---~  204 (266)
                      ........||+.|+|||++.       +..++.++|+|||||++|||++|+.||....                 +   .
T Consensus       217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  296 (412)
T 2vd5_A          217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDE  296 (412)
T ss_dssp             CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----
T ss_pred             ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCcccc
Confidence            33334567999999999886       3568899999999999999999999997622                 1   2


Q ss_pred             cccchHHHHHHHhhhcCCCCC---CCHHHHHH
Q 042690          205 KTLEKPVMIAIQFVKEKPPLR---PSLRIVAL  233 (266)
Q Consensus       205 ~~~~~~~~l~~~cl~~~p~~R---ps~~~il~  233 (266)
                      ..+..+.+++.+||. +|.+|   |+++|+++
T Consensus       297 ~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          297 GVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             CCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            355678899999999 99998   68888864


No 106
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=3.1e-37  Score=255.93  Aligned_cols=210  Identities=19%  Similarity=0.235  Sum_probs=155.1

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .+++|.+.+.||+|+||.||+|.+. .+++.||+|.+.                 .+++.++||||+++++++.+.+..+
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   87 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESI-HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY   87 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEc-cCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence            4678999999999999999999975 578889999763                 2666889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           85 LVYKFMHNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      +||||+++++|.+++... ..++      +..++..++.++|..+++|+     ||+++.++.++|+|||++....... 
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-  166 (278)
T 3cok_A           88 LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-  166 (278)
T ss_dssp             EEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred             EEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC-
Confidence            999999999999999864 3333      44566667788887777776     8999999999999999998754221 


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC---------------CccccchHHHHHHHh
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------DPKTLEKPVMIAIQF  217 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------~~~~~~~~~~l~~~c  217 (266)
                      .......+++.|+|||.+.+..++.++|+||||+++|+|++|+.||....               +......+.+++.+|
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  246 (278)
T 3cok_A          167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQL  246 (278)
T ss_dssp             -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHHHH
T ss_pred             CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHHHH
Confidence            22233568999999999988889999999999999999999999987522               223456778999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q 042690          218 VKEKPPLRPSLRIVAL  233 (266)
Q Consensus       218 l~~~p~~Rps~~~il~  233 (266)
                      |+.||.+||+++++++
T Consensus       247 l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          247 LRRNPADRLSLSSVLD  262 (278)
T ss_dssp             SCSSGGGSCCHHHHTT
T ss_pred             cccCHhhCCCHHHHhc
Confidence            9999999999999875


No 107
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=2.5e-37  Score=269.52  Aligned_cols=209  Identities=15%  Similarity=0.147  Sum_probs=165.2

Q ss_pred             cCceeee-eccCCCcceEEEEEEEcCCCcceeeeeeHH---------HH-hhhcCCCceeeeeeEEEe----CCeEEEEE
Q 042690           23 FSHIYSL-KKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------KV-VHVAHHKNLVCLLGYHIE----QECRLLVY   87 (266)
Q Consensus        23 ~~~~~~~-~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------~~-l~~~~h~~iv~~~~~~~~----~~~~~lv~   87 (266)
                      +.+|++. +.||+|+||+||++.++ .++..||+|++.         .+ .+..+||||+++++++..    ....++||
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~-~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~  138 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNK-RTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM  138 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEEC-CCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEE
Confidence            4567776 68999999999999976 678899999874         12 355689999999999876    55689999


Q ss_pred             EcCCCCCHHHHHhhcC--CCC------HHHHHHHHHHHhhhcCcccc-----ceeecC---CCEEEEeecCcceeecccc
Q 042690           88 KFMHNRSISSLLYECL--RPT------WQQRMQDCIRDCWRTRALAC-----RILLHD---YFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~--~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~---~~~~~l~Dfg~a~~~~~~~  151 (266)
                      ||+++|+|.+++....  .++      +..++..++.++|.++++|+     ||+++.   ++.+||+|||+++....  
T Consensus       139 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~--  216 (400)
T 1nxk_A          139 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS--  216 (400)
T ss_dssp             ECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred             EeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCC--
Confidence            9999999999998643  233      44566667788888888887     899997   78999999999986542  


Q ss_pred             ccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------------ccccc
Q 042690          152 TQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------------PKTLE  208 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------------~~~~~  208 (266)
                      ........||+.|+|||++.+..++.++|||||||++|+|++|..||.....                       .....
T Consensus       217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  296 (400)
T 1nxk_A          217 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE  296 (400)
T ss_dssp             ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCH
T ss_pred             CCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCH
Confidence            2223346689999999999988999999999999999999999999965221                       23456


Q ss_pred             hHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          209 KPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                      .+.+++.+||+.||.+||+++++++.
T Consensus       297 ~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          297 EVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            78899999999999999999999864


No 108
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.6e-37  Score=262.63  Aligned_cols=218  Identities=20%  Similarity=0.257  Sum_probs=171.1

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcce----eeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTN----IGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~----vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      ..+|.+.+.||+|+||.||+|.+. .++..    +++|.+.               .+++.++||||+++++++..+. .
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~   91 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V   91 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEEC-CTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEc-CCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence            468999999999999999999976 34444    4666442               3778899999999999998765 7


Q ss_pred             EEEEEcCCCCCHHHHHhhcC-CC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           84 LLVYKFMHNRSISSLLYECL-RP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~-~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      ++++||+.+++|.+++.... .+      .+..++..++.++|.++++|+     ||+++.++.++|+|||++.......
T Consensus        92 ~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~  171 (327)
T 3lzb_A           92 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred             eEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence            79999999999999997643 23      345667777788888888887     9999999999999999998764322


Q ss_pred             cc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHH
Q 042690          152 TQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMI  213 (266)
Q Consensus       152 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l  213 (266)
                      .. ......++..|+|||++.+..++.++||||||+++|+|++ |..||...                .+......+.++
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  251 (327)
T 3lzb_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI  251 (327)
T ss_dssp             --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHH
T ss_pred             ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHH
Confidence            22 2233456778999999988889999999999999999999 99998752                233456678899


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          214 AIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       214 ~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                      +.+||+.||.+||++.++++.|+.+...+
T Consensus       252 i~~~l~~dp~~Rps~~ell~~L~~~~~~~  280 (327)
T 3lzb_A          252 MRKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred             HHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence            99999999999999999999999997654


No 109
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=9.4e-38  Score=265.14  Aligned_cols=203  Identities=17%  Similarity=0.203  Sum_probs=150.6

Q ss_pred             eeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------HHhhhcC-CCceeeeeeEEEeCCeEEEEEEcCCCCCHH
Q 042690           29 LKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------KVVHVAH-HKNLVCLLGYHIEQECRLLVYKFMHNRSIS   96 (266)
Q Consensus        29 ~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~   96 (266)
                      .+.||+|+||.||++.++ .+++.||+|++.           .+++.+. ||||+++++++.++...++||||+++++|.
T Consensus        16 ~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~   94 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHK-KSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF   94 (325)
T ss_dssp             SCCSEEETTEEEEEEEET-TTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             CCccccCCCeEEEEEEEC-CCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence            378999999999999986 678899999865           2566676 999999999999999999999999999999


Q ss_pred             HHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCC---EEEEeecCcceeeccccccccccccCCC
Q 042690           97 SLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYF---TVETSDLGLAKLLMINQTQTLTGMRETK  162 (266)
Q Consensus        97 ~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~---~~~l~Dfg~a~~~~~~~~~~~~~~~~~~  162 (266)
                      +++.....++      +..++..++.++|..+++|+     ||+++.++   .++|+|||++..... .........+|+
T Consensus        95 ~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~t~  173 (325)
T 3kn6_A           95 ERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCFTL  173 (325)
T ss_dssp             HHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------------
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCC-CCCcccccCCCc
Confidence            9998766654      44556666788888887776     89998766   899999999986542 222334456799


Q ss_pred             CcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC--------------------------ccccchHHHHHHH
Q 042690          163 GYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD--------------------------PKTLEKPVMIAIQ  216 (266)
Q Consensus       163 ~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~--------------------------~~~~~~~~~l~~~  216 (266)
                      .|+|||.+.+..++.++||||||+++|+|++|+.||.....                          ......+.+++.+
T Consensus       174 ~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~  253 (325)
T 3kn6_A          174 HYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQG  253 (325)
T ss_dssp             ----------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHH
T ss_pred             CccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHH
Confidence            99999999988999999999999999999999999965211                          1245678889999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 042690          217 FVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       217 cl~~~p~~Rps~~~il~  233 (266)
                      ||+.||.+||+++++++
T Consensus       254 ~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          254 LLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             HHCCCTTTCCCTTTSTT
T ss_pred             HCCCChhHCCCHHHHhc
Confidence            99999999999999874


No 110
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=2.1e-37  Score=263.66  Aligned_cols=222  Identities=18%  Similarity=0.200  Sum_probs=171.6

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------HH--hhhcCCCceeeeeeEEEe-----CCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------KV--VHVAHHKNLVCLLGYHIE-----QECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------~~--l~~~~h~~iv~~~~~~~~-----~~~~   83 (266)
                      ++++|.+.+.||+|+||.||+|.+   ++..||+|++.           ++  ++.++||||+++++.+..     ...+
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSL---DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEE---TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             ChHHhheeeecccCCCeEEEEEEE---CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            567999999999999999999986   67899999864           12  335789999999986643     2357


Q ss_pred             EEEEEcCCCCCHHHHHhhcCC-----CCHHHHHHHHHHHhhhc---------Ccccc-----ceeecCCCEEEEeecCcc
Q 042690           84 LLVYKFMHNRSISSLLYECLR-----PTWQQRMQDCIRDCWRT---------RALAC-----RILLHDYFTVETSDLGLA  144 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~-----~~~~~~l~~~~~~~~~~---------~~~h~-----nili~~~~~~~l~Dfg~a  144 (266)
                      ++||||+++++|.+++.....     ..+..++..++.++|..         +++|+     ||+++.++.+||+|||++
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a  167 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS  167 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence            899999999999999975433     23455666677777777         77776     999999999999999999


Q ss_pred             eeecccc-------ccccccccCCCCcCCccccCC-------CCCCcccchhhHHHHHHHHHhCCCcccCCCC-------
Q 042690          145 KLLMINQ-------TQTLTGMRETKGYLPPEWFRN-------MPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------  203 (266)
Q Consensus       145 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------  203 (266)
                      .......       ........||+.|+|||++.+       ..++.++|||||||++|+|++|..|+.....       
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~  247 (336)
T 3g2f_A          168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA  247 (336)
T ss_dssp             EECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCT
T ss_pred             eecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHh
Confidence            8754221       112234568999999999876       3466789999999999999999776543111       


Q ss_pred             ------------------------c----------cccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCCCCC
Q 042690          204 ------------------------P----------KTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSPPC  246 (266)
Q Consensus       204 ------------------------~----------~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~~~~  246 (266)
                                              +          .....+.+++.+||+.||.+|||+.++++.|+.+...-....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~  324 (336)
T 3g2f_A          248 FQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK  324 (336)
T ss_dssp             THHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred             hhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence                                    0          012258899999999999999999999999999987654433


No 111
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=2.5e-37  Score=268.24  Aligned_cols=208  Identities=14%  Similarity=0.174  Sum_probs=173.9

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      .+.|.+.+.||+|+||.||+|.+. .++..+|+|.+.              .+++.++||||+++++++.+....++|||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEK-ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEEC-CCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            347999999999999999999986 678889998753              37788999999999999999999999999


Q ss_pred             cCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecC--CCEEEEeecCcceeeccccccc
Q 042690           89 FMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHD--YFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~--~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      |+.+++|.+++.... .++      +..++..++.++|..+++|+     ||+++.  ++.++|+|||++......  ..
T Consensus       129 ~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~--~~  206 (387)
T 1kob_A          129 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--EI  206 (387)
T ss_dssp             CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--SC
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC--cc
Confidence            999999999997543 333      44566677788888888776     899974  578999999999876432  22


Q ss_pred             cccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC-------------------CccccchHHHHHH
Q 042690          155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS-------------------DPKTLEKPVMIAI  215 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-------------------~~~~~~~~~~l~~  215 (266)
                      .....+|+.|+|||++.+..++.++|||||||++|+|++|..||....                   .......+.+++.
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  286 (387)
T 1kob_A          207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIK  286 (387)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHH
T ss_pred             eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHH
Confidence            233468999999999998889999999999999999999999997522                   1234567889999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q 042690          216 QFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       216 ~cl~~~p~~Rps~~~il~  233 (266)
                      +||+.||.+||++.++++
T Consensus       287 ~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          287 NLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             TTSCSSGGGSCCHHHHHT
T ss_pred             HHcCCChhHCcCHHHHhh
Confidence            999999999999999986


No 112
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.1e-37  Score=262.01  Aligned_cols=221  Identities=19%  Similarity=0.285  Sum_probs=173.5

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCC---cceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGD---KTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~---~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .+.|.+.+.||+|+||.||+|.+....   +..||+|.+.               .+++.++||||+++++++...+..+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            457889999999999999999975322   3458998764               3677889999999999999989999


Q ss_pred             EEEEcCCCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           85 LVYKFMHNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      +||||+++++|.+++... ..++      +..++..++.++|..+++|+     ||+++.++.++|+|||++........
T Consensus       123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  202 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  202 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence            999999999999999764 3343      44556666788888777776     89999999999999999987643222


Q ss_pred             c--ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccC----------------CCCccccchHHHH
Q 042690          153 Q--TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQ----------------GSDPKTLEKPVMI  213 (266)
Q Consensus       153 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~----------------~~~~~~~~~~~~l  213 (266)
                      .  ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||..                ..+......+.++
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  282 (333)
T 1mqb_A          203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQL  282 (333)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHH
T ss_pred             cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHHH
Confidence            1  2223445778999999988889999999999999999999 9999864                1233456678899


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          214 AIQFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       214 ~~~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                      +.+||+.||.+||++.++++.|+.+...+.
T Consensus       283 i~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  312 (333)
T 1mqb_A          283 MMQCWQQERARRPKFADIVSILDKLIRAPD  312 (333)
T ss_dssp             HHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             HHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence            999999999999999999999999877654


No 113
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.2e-37  Score=262.72  Aligned_cols=217  Identities=16%  Similarity=0.150  Sum_probs=167.5

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCC----e
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQE----C   82 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~----~   82 (266)
                      ++|.+.+.||+|+||.||+|.+. .+++.||+|++.                 .+++.++||||+++++++....    .
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDL-RDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEEC-CCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            37999999999999999999975 678899999764                 2555778999999999987654    3


Q ss_pred             EEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           83 RLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      .++||||+++++|.+++.....+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++.......
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  170 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG  170 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-------
T ss_pred             cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc
Confidence            489999999999999998766544      44556666788888888877     8999999999999999998654322


Q ss_pred             c--cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------ccccchH
Q 042690          152 T--QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------PKTLEKP  210 (266)
Q Consensus       152 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------~~~~~~~  210 (266)
                      .  .......||+.|+|||++.+..++.++||||||+++|+|+||+.||.....                   ......+
T Consensus       171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  250 (311)
T 3ork_A          171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADL  250 (311)
T ss_dssp             -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHH
T ss_pred             cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHH
Confidence            2  122335689999999999988999999999999999999999999975321                   1245668


Q ss_pred             HHHHHHhhhcCCCCCCCHHH-HHHHHHHHHhC
Q 042690          211 VMIAIQFVKEKPPLRPSLRI-VALMLQSILEV  241 (266)
Q Consensus       211 ~~l~~~cl~~~p~~Rps~~~-il~~l~~~~~~  241 (266)
                      .+++.+||+.||.+||++.+ +...+......
T Consensus       251 ~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~  282 (311)
T 3ork_A          251 DAVVLKALAKNPENRYQTAAEMRADLVRVHNG  282 (311)
T ss_dssp             HHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence            89999999999999996554 45666666443


No 114
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=2.7e-37  Score=261.38  Aligned_cols=209  Identities=20%  Similarity=0.291  Sum_probs=156.9

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      ..++|.+.+.||+|+||.||+|.+. .++..||+|++.               .+++.++||||+++++++.+++..++|
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   81 (317)
T 2pmi_A            3 SSSQFKQLEKLGNGTYATVYKGLNK-TTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV   81 (317)
T ss_dssp             ----------------CEEEEEECS-SSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred             cccceeEeeEECCCCCEEEEEEEEC-CCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence            3468999999999999999999975 578899999764               377888999999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhcC------CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           87 YKFMHNRSISSLLYECL------RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~------~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                      |||+.+ +|.+++....      .+.      +..++..++.++|..+++|+     ||+++.++.+||+|||++.....
T Consensus        82 ~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  160 (317)
T 2pmi_A           82 FEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI  160 (317)
T ss_dssp             EECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred             EEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence            999985 9999987532      233      33466777788888888777     89999999999999999987542


Q ss_pred             ccccccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------------
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------------  203 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------------  203 (266)
                      . ........+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.....                         
T Consensus       161 ~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (317)
T 2pmi_A          161 P-VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL  239 (317)
T ss_dssp             C-CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred             C-cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence            2 223334568999999998876 4589999999999999999999999864211                         


Q ss_pred             ------------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ------------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                              ......+.+++.+||+.||.+|||++++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence                                    023346789999999999999999999875


No 115
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4e-37  Score=261.80  Aligned_cols=217  Identities=19%  Similarity=0.223  Sum_probs=170.1

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------HHhh--hcCCCceeeeeeEEEeC----CeEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------KVVH--VAHHKNLVCLLGYHIEQ----ECRLLV   86 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------~~l~--~~~h~~iv~~~~~~~~~----~~~~lv   86 (266)
                      ++|.+.+.||+|+||.||+|.+   .+..||+|++.           +++.  .++||||+++++++...    ...++|
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv  113 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKW---RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI  113 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEE---TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred             cceEEEeEeecCCCeEEEEEEE---CCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence            4799999999999999999997   47889999864           1333  34899999999999887    688999


Q ss_pred             EEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhc--------Ccccc-----ceeecCCCEEEEeecCcceee
Q 042690           87 YKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRT--------RALAC-----RILLHDYFTVETSDLGLAKLL  147 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~--------~~~h~-----nili~~~~~~~l~Dfg~a~~~  147 (266)
                      |||+++++|.+++... .+.      +..++..++.++|..        +++|+     ||+++.++.+||+|||++...
T Consensus       114 ~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~  192 (337)
T 3mdy_A          114 TDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF  192 (337)
T ss_dssp             ECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence            9999999999999753 333      445556666777766        66665     999999999999999999765


Q ss_pred             cccccc---ccccccCCCCcCCccccCCCCCCcc------cchhhHHHHHHHHHhC----------CCcccCCCC-----
Q 042690          148 MINQTQ---TLTGMRETKGYLPPEWFRNMPVTVK------VDVYSFGVMLLEIISC----------RCVERQGSD-----  203 (266)
Q Consensus       148 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~------~Di~slG~i~~~l~tg----------~~p~~~~~~-----  203 (266)
                      ......   ......||+.|+|||++.+...+..      +||||||+++|+|+||          +.||.....     
T Consensus       193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~  272 (337)
T 3mdy_A          193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY  272 (337)
T ss_dssp             C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCch
Confidence            432222   1224578999999999887665554      9999999999999999          556643110     


Q ss_pred             ----------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCCC
Q 042690          204 ----------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP  244 (266)
Q Consensus       204 ----------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~~  244 (266)
                                            ......+.+++.+||+.||.+||++.++++.|+.+.+....
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~  335 (337)
T 3mdy_A          273 EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI  335 (337)
T ss_dssp             HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTTC
T ss_pred             hhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhccc
Confidence                                  12334578899999999999999999999999999887654


No 116
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=1e-36  Score=253.65  Aligned_cols=215  Identities=18%  Similarity=0.217  Sum_probs=179.4

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ..++|.+.+.||+|+||.||+|.+. .++..+|+|.+.                 ++++.++||||+++++++.+.+..+
T Consensus        12 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   90 (284)
T 2vgo_A           12 TIDDFDIGRPLGKGKFGNVYLAREK-QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY   90 (284)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhceeeheecCCCCeEEEEEEEc-CCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence            3568999999999999999999975 677889999762                 3677889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      +||||+++++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.++|+|||++.....   .
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~---~  167 (284)
T 2vgo_A           91 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS---L  167 (284)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS---S
T ss_pred             EEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcc---c
Confidence            9999999999999998765544      44566667788888887776     89999999999999999976532   2


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhh
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl  218 (266)
                      ......++..|+|||.+.+..++.++|+||||+++|+|++|..||...               .++.....+.+++.+||
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  247 (284)
T 2vgo_A          168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLL  247 (284)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHS
T ss_pred             ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHHHHHHh
Confidence            223456899999999999888999999999999999999999999652               23445677889999999


Q ss_pred             hcCCCCCCCHHHHHH--HHHHHHh
Q 042690          219 KEKPPLRPSLRIVAL--MLQSILE  240 (266)
Q Consensus       219 ~~~p~~Rps~~~il~--~l~~~~~  240 (266)
                      +.||.+||+++++++  .++....
T Consensus       248 ~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          248 RYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             CSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             hcCHhhCCCHHHHhhCHHHHhhcc
Confidence            999999999999985  4444433


No 117
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.1e-37  Score=256.64  Aligned_cols=208  Identities=16%  Similarity=0.237  Sum_probs=154.8

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .+++|.+.+.||+|+||.||+|.+. .+++.||+|++.                 .+++.++||||+++++++.+.+..+
T Consensus        11 ~~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   89 (275)
T 2eue_A           11 HIGNYQIVKTLGEGSFAKVKLAYHT-TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEII   89 (275)
T ss_dssp             BCCCBCCCC---------EEEEECT-TTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEE
T ss_pred             cccceEEEEEEEcCCCEEEEEEEEC-CCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEE
Confidence            4678999999999999999999975 678899999753                 3778889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      +||||+ +++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.++|+|||++......  .
T Consensus        90 lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~  166 (275)
T 2eue_A           90 MVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--N  166 (275)
T ss_dssp             EEEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred             EEehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCc--c
Confidence            999999 668999887766554      44556666788888888876     999999999999999999765422  2


Q ss_pred             ccccccCCCCcCCccccCCCCC-CcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHh
Q 042690          154 TLTGMRETKGYLPPEWFRNMPV-TVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQF  217 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~c  217 (266)
                      ......+|+.|+|||.+.+..+ +.++||||||+++|+|++|+.||...               .+......+.+++.+|
T Consensus       167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  246 (275)
T 2eue_A          167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM  246 (275)
T ss_dssp             --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHH
T ss_pred             cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHH
Confidence            2234568999999999887665 68999999999999999999999762               2344567788999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q 042690          218 VKEKPPLRPSLRIVAL  233 (266)
Q Consensus       218 l~~~p~~Rps~~~il~  233 (266)
                      |+.||.+|||++|+++
T Consensus       247 l~~dP~~Rps~~e~l~  262 (275)
T 2eue_A          247 LIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             SCSSGGGSCCHHHHTT
T ss_pred             hhcCHhHCCCHHHHhh
Confidence            9999999999999975


No 118
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=8.6e-37  Score=254.39  Aligned_cols=208  Identities=20%  Similarity=0.223  Sum_probs=170.5

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------------HHhhhcCCCceeeeeeEEEeCC
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------------KVVHVAHHKNLVCLLGYHIEQE   81 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------------~~l~~~~h~~iv~~~~~~~~~~   81 (266)
                      .++|.+.+.||+|+||.||+|.+. .++..||+|.+.                     .+++.++||||+++++++.+..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEET-TTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred             hccceehhccccCCceeEEEEEEc-CCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence            458999999999999999999986 678889999762                     3677889999999999986554


Q ss_pred             eEEEEEEcCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcC--cccc-----ceeecCCCE-----EEEeecC
Q 042690           82 CRLLVYKFMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTR--ALAC-----RILLHDYFT-----VETSDLG  142 (266)
Q Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~--~~h~-----nili~~~~~-----~~l~Dfg  142 (266)
                        ++||||+++++|.+++.... .+.      +..++..++.++|.++  ++|+     ||+++.++.     ++|+|||
T Consensus        97 --~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg  174 (287)
T 4f0f_A           97 --RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG  174 (287)
T ss_dssp             --EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred             --eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence              69999999999999886543 333      4455666778888888  8876     899988776     9999999


Q ss_pred             cceeeccccccccccccCCCCcCCccccC--CCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------
Q 042690          143 LAKLLMINQTQTLTGMRETKGYLPPEWFR--NMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------  202 (266)
Q Consensus       143 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------  202 (266)
                      ++....    .......+|+.|+|||++.  ...++.++||||||+++|+|++|+.||....                  
T Consensus       175 ~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  250 (287)
T 4f0f_A          175 LSQQSV----HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT  250 (287)
T ss_dssp             TCBCCS----SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCC
T ss_pred             cccccc----ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCC
Confidence            997543    2233466899999999884  4457889999999999999999999996521                  


Q ss_pred             -CccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 042690          203 -DPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQS  237 (266)
Q Consensus       203 -~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~  237 (266)
                       +......+.+++.+||+.||.+||+++++++.|+.
T Consensus       251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence             23345678899999999999999999999999975


No 119
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.2e-37  Score=262.64  Aligned_cols=215  Identities=19%  Similarity=0.291  Sum_probs=170.0

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      +++|.+.+.||+|+||.||+|.+. .++..||+|++.               .+++.++||||+++++++.+.+..++||
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSK-LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   79 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             CCceEEEEEEcCCCCEEEEEEEEC-CCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence            368999999999999999999986 678889999664               4788899999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           88 KFMHNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      ||+.+ +|.+++..... +.      +..++..++.++|..+++|+     ||+++.++.++|+|||++..... .....
T Consensus        80 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~-~~~~~  157 (324)
T 3mtl_A           80 EYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI-PTKTY  157 (324)
T ss_dssp             ECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred             ccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccC-Ccccc
Confidence            99975 99999876543 33      44566777788888887776     99999999999999999986542 22233


Q ss_pred             ccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------------------
Q 042690          156 TGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------------------  203 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------------------  203 (266)
                      ....+|+.|+|||.+.+ ..++.++||||||+++|+|++|+.||.....                               
T Consensus       158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (324)
T 3mtl_A          158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY  237 (324)
T ss_dssp             -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred             ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence            34567999999998876 5689999999999999999999999965221                               


Q ss_pred             --------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH--HHHHHHh
Q 042690          204 --------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL--MLQSILE  240 (266)
Q Consensus       204 --------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~--~l~~~~~  240 (266)
                                    +.....+.+++.+||+.||.+|||++|+++  .+..+.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence                          112345678999999999999999999986  3554433


No 120
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=4.8e-37  Score=259.17  Aligned_cols=205  Identities=16%  Similarity=0.142  Sum_probs=165.1

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH-----------------HhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-----------------VVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~-----------------~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      ..|.+.++||+|+||+||+|.+. .++..||+|++..                 ..+..+||||+++++++.+.+..++|
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv  135 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSK-EDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ  135 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-TTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEEC-CCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence            46999999999999999999986 6788999997631                 22344899999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           87 YKFMHNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      |||+ +++|.+++..... ++      +..++..++.++|..+++|+     ||+++.++.+||+|||++.....  ...
T Consensus       136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~--~~~  212 (311)
T 3p1a_A          136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT--AGA  212 (311)
T ss_dssp             EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred             Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeeccc--CCC
Confidence            9999 5699998876443 44      44566667788887777776     99999999999999999987542  222


Q ss_pred             cccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC--------------CccccchHHHHHHHhhhc
Q 042690          155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS--------------DPKTLEKPVMIAIQFVKE  220 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~--------------~~~~~~~~~~l~~~cl~~  220 (266)
                      .....||+.|+|||++.+ .++.++||||||+++|+|++|..|+....              .......+.+++.+||+.
T Consensus       213 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  291 (311)
T 3p1a_A          213 GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEP  291 (311)
T ss_dssp             --CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCS
T ss_pred             CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHHcCC
Confidence            334568999999998876 78999999999999999999977654411              123456788999999999


Q ss_pred             CCCCCCCHHHHHH
Q 042690          221 KPPLRPSLRIVAL  233 (266)
Q Consensus       221 ~p~~Rps~~~il~  233 (266)
                      ||.+||+++++++
T Consensus       292 dP~~Rpt~~ell~  304 (311)
T 3p1a_A          292 DPKLRATAEALLA  304 (311)
T ss_dssp             STTTSCCHHHHHT
T ss_pred             ChhhCcCHHHHHh
Confidence            9999999999986


No 121
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=8.1e-37  Score=258.48  Aligned_cols=212  Identities=15%  Similarity=0.148  Sum_probs=172.9

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCC--eEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQE--CRLLV   86 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~--~~~lv   86 (266)
                      ..|.+.+.||+|+||.||+|.+. .+++.||+|++.               ++++.++||||+++++++....  ..++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEEC-CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            47999999999999999999986 568899999754               3788999999999999998765  78999


Q ss_pred             EEcCCCCCHHHHHhhcCC---CC------HHHHHHHHHHHhhhcCcccc-----ceee----cCCCEEEEeecCcceeec
Q 042690           87 YKFMHNRSISSLLYECLR---PT------WQQRMQDCIRDCWRTRALAC-----RILL----HDYFTVETSDLGLAKLLM  148 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~---~~------~~~~l~~~~~~~~~~~~~h~-----nili----~~~~~~~l~Dfg~a~~~~  148 (266)
                      |||+++++|.+++.....   +.      +..++..++.++|..+++|+     ||++    +.++.+||+|||++....
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~  167 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence            999999999999986432   33      44566667788887777776     8998    788899999999998764


Q ss_pred             cccccccccccCCCCcCCccccC--------CCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------
Q 042690          149 INQTQTLTGMRETKGYLPPEWFR--------NMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------  203 (266)
Q Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------  203 (266)
                      ..  .......+|..|+|||++.        +..++.++|||||||++|+|+||+.||.....                 
T Consensus       168 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~  245 (319)
T 4euu_A          168 DD--EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS  245 (319)
T ss_dssp             TT--CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCT
T ss_pred             CC--CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCc
Confidence            32  2333456899999999875        56789999999999999999999999963111                 


Q ss_pred             ---------------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042690          204 ---------------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSI  238 (266)
Q Consensus       204 ---------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~  238 (266)
                                                 ......+.+++.+||+.||.+||+++|+++.....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence                                       11233567899999999999999999999887654


No 122
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.8e-37  Score=262.49  Aligned_cols=213  Identities=16%  Similarity=0.165  Sum_probs=174.6

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcC--CCcceeeeeeHH------------------HHhhhc-CCCceeeeeeEEEeC
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAP--GDKTNIGVKKLD------------------KVVHVA-HHKNLVCLLGYHIEQ   80 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~--~~~~~vaiK~~~------------------~~l~~~-~h~~iv~~~~~~~~~   80 (266)
                      ...+|.+.+.||+|+||.||++....  .++..||+|++.                  .+++.+ +||||+++++++...
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  131 (355)
T 1vzo_A           52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  131 (355)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence            34689999999999999999999742  478889999764                  366677 699999999999999


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           81 ECRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                      +..++||||+++++|.+++.....+.      +..++..++.++|..+++|+     ||+++.++.++|+|||+++....
T Consensus       132 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~  211 (355)
T 1vzo_A          132 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA  211 (355)
T ss_dssp             TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred             ceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeeccc
Confidence            99999999999999999998766654      33456666788888888777     99999999999999999987654


Q ss_pred             ccccccccccCCCCcCCccccCCC--CCCcccchhhHHHHHHHHHhCCCcccCC-------------------CCccccc
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRNM--PVTVKVDVYSFGVMLLEIISCRCVERQG-------------------SDPKTLE  208 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~i~~~l~tg~~p~~~~-------------------~~~~~~~  208 (266)
                      ..........||+.|+|||++.+.  .++.++||||||+++|+|++|+.||...                   .+.....
T Consensus       212 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (355)
T 1vzo_A          212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA  291 (355)
T ss_dssp             GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCH
T ss_pred             CCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCcccCH
Confidence            444444456789999999998753  4788999999999999999999999642                   1233455


Q ss_pred             hHHHHHHHhhhcCCCCCC-----CHHHHHHH
Q 042690          209 KPVMIAIQFVKEKPPLRP-----SLRIVALM  234 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rp-----s~~~il~~  234 (266)
                      .+.+++.+||+.||.+||     +++++++.
T Consensus       292 ~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          292 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             HHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            678899999999999999     88988754


No 123
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=4.4e-37  Score=260.97  Aligned_cols=219  Identities=20%  Similarity=0.241  Sum_probs=177.7

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcc--eeeeeeHH---------------HHhhhc-CCCceeeeeeEEEeCCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKT--NIGVKKLD---------------KVVHVA-HHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~--~vaiK~~~---------------~~l~~~-~h~~iv~~~~~~~~~~~~   83 (266)
                      ++++|.+.+.||+|+||.||+|.+. .++.  .+++|.+.               ++++.+ +||||+++++++.+.+..
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  101 (327)
T 1fvr_A           23 DWNDIKFQDVIGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL  101 (327)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEE-ETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred             cHHHccceeeeecCCCceEEEEEEc-cCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence            4678999999999999999999975 3444  34787654               367788 899999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcC----------------CC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEE
Q 042690           84 LLVYKFMHNRSISSLLYECL----------------RP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTV  136 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~----------------~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~  136 (266)
                      ++||||+++++|.+++....                .+      .+..++..++.++|..+++|+     ||+++.++.+
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCE
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeE
Confidence            99999999999999997643                23      344566667788888877776     8999999999


Q ss_pred             EEeecCcceeeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC--------------
Q 042690          137 ETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG--------------  201 (266)
Q Consensus       137 ~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~--------------  201 (266)
                      +|+|||++.....  ........++..|+|||.+.+..++.++||||||+++|+|+| |..||...              
T Consensus       182 kL~Dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~  259 (327)
T 1fvr_A          182 KIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR  259 (327)
T ss_dssp             EECCTTCEESSCE--ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred             EEcccCcCccccc--cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC
Confidence            9999999975321  112223446788999999988888999999999999999998 99998652              


Q ss_pred             --CCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          202 --SDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       202 --~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                        .+......+.+++.+||+.||.+||+++++++.|+.+.+...
T Consensus       260 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          260 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence              233455678899999999999999999999999999977644


No 124
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=5.2e-37  Score=262.13  Aligned_cols=209  Identities=13%  Similarity=0.101  Sum_probs=169.3

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .+|.+.+.||+|+||.||+|.+. .++..+|+|++.                   .+++.++||||+++++++.+.+..+
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIEN-QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hheeecceeeecCCeEEEEEEEC-CCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence            47999999999999999999975 678889999642                   3778899999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcC----------------------------------------------CCCHHHHHHHHHHHh
Q 042690           85 LVYKFMHNRSISSLLYECL----------------------------------------------RPTWQQRMQDCIRDC  118 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~----------------------------------------------~~~~~~~l~~~~~~~  118 (266)
                      +||||+++++|.+++....                                              ...+..++..++.++
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  184 (345)
T 3hko_A          105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL  184 (345)
T ss_dssp             EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            9999999999999985210                                              012556777777888


Q ss_pred             hhcCcccc-----ceeecCCC--EEEEeecCcceeecccccc---ccccccCCCCcCCccccCC--CCCCcccchhhHHH
Q 042690          119 WRTRALAC-----RILLHDYF--TVETSDLGLAKLLMINQTQ---TLTGMRETKGYLPPEWFRN--MPVTVKVDVYSFGV  186 (266)
Q Consensus       119 ~~~~~~h~-----nili~~~~--~~~l~Dfg~a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~  186 (266)
                      |..+++|+     ||+++.++  .++|+|||++.........   ......+|+.|+|||.+.+  ..++.++||||||+
T Consensus       185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~  264 (345)
T 3hko_A          185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV  264 (345)
T ss_dssp             HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred             HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence            88887777     89998776  8999999999875432211   2345678999999998865  56889999999999


Q ss_pred             HHHHHHhCCCcccCCC-------------------CccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          187 MLLEIISCRCVERQGS-------------------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       187 i~~~l~tg~~p~~~~~-------------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      ++|+|++|+.||....                   .......+.+++.+||+.||.+||++.++++
T Consensus       265 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          265 LLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            9999999999996511                   1124567889999999999999999999986


No 125
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=9.8e-38  Score=260.23  Aligned_cols=216  Identities=20%  Similarity=0.248  Sum_probs=173.7

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCC------cceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCe
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGD------KTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQEC   82 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~------~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~   82 (266)
                      .++|.+.+.||+|+||.||+|.+....      +..|++|.+.              .+++.++||||+++++++.+++.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            458999999999999999999975222      2568998763              37788999999999999999999


Q ss_pred             EEEEEEcCCCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCE--------EEEeecC
Q 042690           83 RLLVYKFMHNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFT--------VETSDLG  142 (266)
Q Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~--------~~l~Dfg  142 (266)
                      .++||||+++++|.+++..... ++      +..++..++.++|..+++|+     ||+++.++.        ++|+|||
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg  166 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG  166 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred             CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCc
Confidence            9999999999999999986543 33      44566677788888888877     899998887        9999999


Q ss_pred             cceeeccccccccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccC---------------CCCccc
Q 042690          143 LAKLLMINQTQTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQ---------------GSDPKT  206 (266)
Q Consensus       143 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~---------------~~~~~~  206 (266)
                      ++......     ....++..|+|||++.+ ..++.++||||||+++|+|++|..|+..               ..+...
T Consensus       167 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (289)
T 4fvq_A          167 ISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPK  241 (289)
T ss_dssp             SCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCS
T ss_pred             ccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCCC
Confidence            98654321     12346888999998877 6689999999999999999996654433               223445


Q ss_pred             cchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          207 LEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       207 ~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                      ...+.+++.+||+.||.+||+++++++.|+.+..+..
T Consensus       242 ~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~  278 (289)
T 4fvq_A          242 AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL  278 (289)
T ss_dssp             SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence            6788999999999999999999999999999877543


No 126
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=8.6e-37  Score=253.90  Aligned_cols=207  Identities=18%  Similarity=0.218  Sum_probs=173.9

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      ++|.+.+.||+|+||.||+|.+. .++..||+|++.                .+++.++||||+++++++..++..++||
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEc-CCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            47999999999999999999976 678889999753                3678899999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCE---EEEeecCcceeecccccc
Q 042690           88 KFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFT---VETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~---~~l~Dfg~a~~~~~~~~~  153 (266)
                      ||+.+++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.   ++|+|||++.....  ..
T Consensus        85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~--~~  162 (284)
T 3kk8_A           85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND--SE  162 (284)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS--SC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc--Cc
Confidence            9999999999988765543      44566667788887777776     899986655   99999999987542  22


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC-------------------CccccchHHHHH
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS-------------------DPKTLEKPVMIA  214 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-------------------~~~~~~~~~~l~  214 (266)
                      ......+++.|+|||.+.+..++.++||||||+++|+|++|..||....                   .......+.+++
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (284)
T 3kk8_A          163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI  242 (284)
T ss_dssp             BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHH
T ss_pred             cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHH
Confidence            2334668999999999999889999999999999999999999986511                   124456788999


Q ss_pred             HHhhhcCCCCCCCHHHHHH
Q 042690          215 IQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~  233 (266)
                      .+||+.||.+||+++++++
T Consensus       243 ~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          243 DSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             HHHSCSSTTTSCCHHHHTT
T ss_pred             HHHcccChhhCCCHHHHhc
Confidence            9999999999999999986


No 127
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=1.7e-37  Score=264.04  Aligned_cols=215  Identities=22%  Similarity=0.244  Sum_probs=172.9

Q ss_pred             hhHhcccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeC
Q 042690           17 NRVFGSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQ   80 (266)
Q Consensus        17 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~   80 (266)
                      +-++..+++|.+.+.||+|+||.||+|.+. .++..||+|++.                .+++.++||||+++++++.+.
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   96 (331)
T 4aaa_A           18 NLYFQSMEKYENLGLVGEGSYGMVMKCRNK-DTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK   96 (331)
T ss_dssp             -CCCBCGGGEEEEEEGGGGTTSSEEEEEET-TTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             hhhhhhhhhheeeeEEeecCCEEEEEEEEC-CCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC
Confidence            445677899999999999999999999986 668899999752                377889999999999999999


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           81 ECRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                      +..++||||+.+++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.++|+|||++.....
T Consensus        97 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  176 (331)
T 4aaa_A           97 KRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA  176 (331)
T ss_dssp             TEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             CEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence            99999999999999988876555543      44566667788888888876     89999999999999999986542


Q ss_pred             ccccccccccCCCCcCCccccCCC-CCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------------
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRNM-PVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------------  203 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------------  203 (266)
                      . ........++..|+|||.+.+. .++.++||||||+++|+|++|+.||.....                         
T Consensus       177 ~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (331)
T 4aaa_A          177 P-GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN  255 (331)
T ss_dssp             --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred             C-ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence            2 2223345689999999988765 688999999999999999999999865321                         


Q ss_pred             ---------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ---------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ---------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                           +.....+.+++.+||+.||.+||+++++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                                 123566889999999999999999998875


No 128
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=2.2e-37  Score=264.54  Aligned_cols=218  Identities=15%  Similarity=0.168  Sum_probs=176.8

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------HHhhhc-CCCceeeeeeEEEeCCeEEEEEEcCCC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------KVVHVA-HHKNLVCLLGYHIEQECRLLVYKFMHN   92 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~~   92 (266)
                      +.|.+.+.||+|+||.||++.++ .++..||+|.+.          +++..+ +||||+++++++.+....++||||+++
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g  100 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHK-ATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG  100 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             ccEEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence            47999999999999999999986 678899999875          245555 799999999999999999999999999


Q ss_pred             CCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCC----CEEEEeecCcceeecccccccccc
Q 042690           93 RSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDY----FTVETSDLGLAKLLMINQTQTLTG  157 (266)
Q Consensus        93 ~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~----~~~~l~Dfg~a~~~~~~~~~~~~~  157 (266)
                      |+|.+++.....++      +..++..++.++|.++++|+     ||++.++    +.++|+|||++....... .....
T Consensus       101 g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~  179 (342)
T 2qr7_A          101 GELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-GLLMT  179 (342)
T ss_dssp             CBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT-CCBCC
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC-Cceec
Confidence            99999998766544      44566677788888888887     8997543    359999999998764322 23334


Q ss_pred             ccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC----------------------CccccchHHHHHH
Q 042690          158 MRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS----------------------DPKTLEKPVMIAI  215 (266)
Q Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~----------------------~~~~~~~~~~l~~  215 (266)
                      ..+|+.|+|||++.+..++.++|+||||+++|+|++|..||....                      .......+.+++.
T Consensus       180 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  259 (342)
T 2qr7_A          180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVS  259 (342)
T ss_dssp             SSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHH
T ss_pred             cCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHH
Confidence            678999999999887778899999999999999999999997421                      1234567889999


Q ss_pred             HhhhcCCCCCCCHHHHHH--HHHHHHhCCC
Q 042690          216 QFVKEKPPLRPSLRIVAL--MLQSILEVPS  243 (266)
Q Consensus       216 ~cl~~~p~~Rps~~~il~--~l~~~~~~~~  243 (266)
                      +||+.||.+||++.++++  .+..+...+.
T Consensus       260 ~~L~~dP~~R~t~~~il~hp~~~~~~~~~~  289 (342)
T 2qr7_A          260 KMLHVDPHQRLTAALVLRHPWIVHWDQLPQ  289 (342)
T ss_dssp             HHTCSSTTTSCCHHHHTTSHHHHTGGGSCC
T ss_pred             HHCCCChhHCcCHHHHhcCCeecCcccccc
Confidence            999999999999999985  4555544443


No 129
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=3.7e-37  Score=261.46  Aligned_cols=219  Identities=19%  Similarity=0.246  Sum_probs=177.0

Q ss_pred             CceeeeeccCCCcceEEEEEEE---cCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEe--CCeEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVL---APGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIE--QECRL   84 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~---~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~--~~~~~   84 (266)
                      .+|.+.+.||+|+||.||++.+   ...++..||+|++.              ++++.++||||+++++++..  ....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5899999999999999999995   23578889999864              37788999999999999874  45689


Q ss_pred             EEEEcCCCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           85 LVYKFMHNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      +||||+++++|.+++... ..+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++........
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  182 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD  182 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCS
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCc
Confidence            999999999999999763 2233      44556666788887777776     99999999999999999987643222


Q ss_pred             c--ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccC------------------------------
Q 042690          153 Q--TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ------------------------------  200 (266)
Q Consensus       153 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~------------------------------  200 (266)
                      .  ......++..|+|||++.+..++.++||||||+++|+|++|..||..                              
T Consensus       183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (327)
T 3lxl_A          183 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQR  262 (327)
T ss_dssp             EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCC
T ss_pred             cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccC
Confidence            1  22335578889999999888889999999999999999999988754                              


Q ss_pred             -CCCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          201 -GSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       201 -~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                       ..+......+.+++.+||+.||.+||+++++++.|+.+....
T Consensus       263 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          263 LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred             CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence             122345567889999999999999999999999999886543


No 130
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=6.1e-37  Score=262.10  Aligned_cols=216  Identities=13%  Similarity=0.073  Sum_probs=171.0

Q ss_pred             CceeeeeccCCCcceEEEEEEEcC--CCcceeeeeeHH-------------------------HHhhhcCCCceeeeeeE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAP--GDKTNIGVKKLD-------------------------KVVHVAHHKNLVCLLGY   76 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~--~~~~~vaiK~~~-------------------------~~l~~~~h~~iv~~~~~   76 (266)
                      ++|.+.+.||+|+||.||+|.+..  ..+..+|+|...                         ..++.++||||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            579999999999999999999862  267788988753                         13556799999999999


Q ss_pred             EEe----CCeEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCC--EEEEe
Q 042690           77 HIE----QECRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYF--TVETS  139 (266)
Q Consensus        77 ~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~--~~~l~  139 (266)
                      +..    ....++||||+ +++|.+++.....++      +..++..++.++|..+++|+     ||+++.++  .++|+
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~  195 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLA  195 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEEC
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEE
Confidence            987    67899999999 899999998665544      44556666788888888777     89999887  99999


Q ss_pred             ecCcceeecccccc------ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC-----------
Q 042690          140 DLGLAKLLMINQTQ------TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS-----------  202 (266)
Q Consensus       140 Dfg~a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-----------  202 (266)
                      |||+++........      ......+|..|+|||++.+..++.++||||||+++|+|+||+.||....           
T Consensus       196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~  275 (345)
T 2v62_A          196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKT  275 (345)
T ss_dssp             CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHH
T ss_pred             eCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHH
Confidence            99999876432111      1134578999999999998889999999999999999999999995411           


Q ss_pred             ------Cc---------cccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          203 ------DP---------KTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       203 ------~~---------~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                            +.         .....+.+++.+||+.||.+||+++++++.|+....
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          276 NLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             hhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence                  11         445588899999999999999999999999988755


No 131
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.4e-37  Score=256.29  Aligned_cols=221  Identities=17%  Similarity=0.206  Sum_probs=178.2

Q ss_pred             cCceeeee-ccCCCcceEEEEEEEc-CCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           23 FSHIYSLK-KPCGGSFSTVYTGVLA-PGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        23 ~~~~~~~~-~ig~G~~g~V~~~~~~-~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      .++|++.+ .||+|+||.||+|.+. ...+..||+|.+.               ++++.++||||+++++++ ..+..++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            45778877 9999999999999863 2467789998864               377788999999999998 4566899


Q ss_pred             EEEcCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           86 VYKFMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      ||||+.+++|.+++.... .++      +..++..++.++|..+++|+     ||+++.++.++|+|||++.........
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  166 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY  166 (287)
T ss_dssp             EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred             EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence            999999999999996433 233      44566666788888877776     899999999999999999876432221


Q ss_pred             --ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHH
Q 042690          154 --TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIA  214 (266)
Q Consensus       154 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~  214 (266)
                        ......+++.|+|||.+.+..++.++|+||||+++|+|+| |+.||...                .++.....+.+++
T Consensus       167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li  246 (287)
T 1u59_A          167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALM  246 (287)
T ss_dssp             ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHH
Confidence              1223456789999999988788999999999999999998 99998652                2345567888999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHhCCCC
Q 042690          215 IQFVKEKPPLRPSLRIVALMLQSILEVPSP  244 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~~l~~~~~~~~~  244 (266)
                      .+||+.||.+||++.++++.|+.+......
T Consensus       247 ~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  276 (287)
T 1u59_A          247 SDCWIYKWEDRPDFLTVEQRMRACYYSLAS  276 (287)
T ss_dssp             HHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred             HHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999998665443


No 132
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=5.2e-37  Score=256.17  Aligned_cols=212  Identities=21%  Similarity=0.310  Sum_probs=162.8

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      ++|.+.+.||+|+||.||+|.+.    ..+|+|.+.                .+++.++||||++++++. .....++||
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~~~~~----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           24 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             TSCEEEEEEEECSSEEEEEEESS----SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred             cceeeeeEecCCCCeEEEEEEEc----CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence            57999999999999999999863    247887653                377889999999999965 556688999


Q ss_pred             EcCCCCCHHHHHhhcC-CC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc-ccc
Q 042690           88 KFMHNRSISSLLYECL-RP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ-TQT  154 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~-~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~-~~~  154 (266)
                      ||+++++|.+++.... .+      .+..++..++.++|..+++|+     ||+++.++.++|+|||++....... ...
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  178 (289)
T 3og7_A           99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ  178 (289)
T ss_dssp             ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred             EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence            9999999999996433 23      344566677788888888877     8999999999999999997654221 222


Q ss_pred             cccccCCCCcCCccccC---CCCCCcccchhhHHHHHHHHHhCCCcccCCC---------------------CccccchH
Q 042690          155 LTGMRETKGYLPPEWFR---NMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------------DPKTLEKP  210 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------------~~~~~~~~  210 (266)
                      .....+|+.|+|||.+.   +..++.++||||||+++|+|++|+.||....                     ....+..+
T Consensus       179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  258 (289)
T 3og7_A          179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM  258 (289)
T ss_dssp             -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHH
T ss_pred             ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHH
Confidence            33456899999999886   5678889999999999999999999997521                     12345678


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          211 VMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       211 ~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      .+++.+||+.||.+||++.++++.|+.+.+
T Consensus       259 ~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          259 KRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            899999999999999999999999998764


No 133
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=5.8e-37  Score=264.90  Aligned_cols=206  Identities=18%  Similarity=0.194  Sum_probs=165.2

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEcC
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKFM   90 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   90 (266)
                      .+...+.||+|+||.||+|... .++..||+|++.              ++++.++||||+++++++...+..++||||+
T Consensus        90 ~~~~~~~lG~G~~g~Vy~a~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~  168 (373)
T 2x4f_A           90 TVSKTEILGGGRFGQVHKCEET-ATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV  168 (373)
T ss_dssp             EEEEEEECC-----CEEEEEET-TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eeecceEEecCcCEEEEEEEEc-CCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence            3445678999999999999976 578889999754              3778899999999999999999999999999


Q ss_pred             CCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceee--cCCCEEEEeecCcceeeccccccccc
Q 042690           91 HNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILL--HDYFTVETSDLGLAKLLMINQTQTLT  156 (266)
Q Consensus        91 ~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili--~~~~~~~l~Dfg~a~~~~~~~~~~~~  156 (266)
                      ++++|.+++.... .+.      +..++..++.++|..+++|+     ||++  +.++.++|+|||++......  ....
T Consensus       169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~--~~~~  246 (373)
T 2x4f_A          169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR--EKLK  246 (373)
T ss_dssp             TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT--CBCC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc--cccc
Confidence            9999999886532 233      34566677788888887776     8998  56789999999999876432  2233


Q ss_pred             cccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------ccccchHHHHHHHh
Q 042690          157 GMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------PKTLEKPVMIAIQF  217 (266)
Q Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------~~~~~~~~~l~~~c  217 (266)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|..||.....                   ......+.+++.+|
T Consensus       247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  326 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKL  326 (373)
T ss_dssp             CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTT
T ss_pred             cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHH
Confidence            45689999999999888899999999999999999999999975221                   23456788999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q 042690          218 VKEKPPLRPSLRIVAL  233 (266)
Q Consensus       218 l~~~p~~Rps~~~il~  233 (266)
                      |+.||.+||+++++++
T Consensus       327 L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          327 LIKEKSWRISASEALK  342 (373)
T ss_dssp             SCSSGGGSCCHHHHHH
T ss_pred             cCCChhhCCCHHHHhc
Confidence            9999999999999986


No 134
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=2.8e-36  Score=251.98  Aligned_cols=218  Identities=14%  Similarity=0.113  Sum_probs=175.6

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhcCCCceeeeeeEE-EeCCeEEEEEEcC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVAHHKNLVCLLGYH-IEQECRLLVYKFM   90 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~~h~~iv~~~~~~-~~~~~~~lv~e~~   90 (266)
                      ++|.+.+.||+|+||.||+|.+. .++..||+|.+.            ++++.++|++++..+..+ ......++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CceEEeeeecCCCCeEEEEEEEc-CCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence            47999999999999999999975 678899999643            477888887776666655 5677889999999


Q ss_pred             CCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceee---cCCCEEEEeecCcceeeccccc---
Q 042690           91 HNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILL---HDYFTVETSDLGLAKLLMINQT---  152 (266)
Q Consensus        91 ~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili---~~~~~~~l~Dfg~a~~~~~~~~---  152 (266)
                       +++|.+++... ..++      +..++..++.++|.++++|+     ||++   +.++.++|+|||++........   
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~  166 (296)
T 4hgt_A           88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH  166 (296)
T ss_dssp             -CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB
T ss_pred             -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCcc
Confidence             88999999743 3333      44566677788888887776     8999   7889999999999987653322   


Q ss_pred             ---cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------------ccc
Q 042690          153 ---QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------------PKT  206 (266)
Q Consensus       153 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------------~~~  206 (266)
                         .......+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.....                       ...
T Consensus       167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (296)
T 4hgt_A          167 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGY  246 (296)
T ss_dssp             CCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTS
T ss_pred             CCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccC
Confidence               122346789999999999998999999999999999999999999975221                       223


Q ss_pred             cchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          207 LEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       207 ~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                      +..+.+++.+||+.||.+||+++++++.|+.+.....
T Consensus       247 ~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          247 PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence            5678899999999999999999999999999876543


No 135
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=2.6e-37  Score=262.86  Aligned_cols=220  Identities=19%  Similarity=0.203  Sum_probs=178.3

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCC----CcceeeeeeHH---------------HHhhhc-CCCceeeeeeEEEeC
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPG----DKTNIGVKKLD---------------KVVHVA-HHKNLVCLLGYHIEQ   80 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~----~~~~vaiK~~~---------------~~l~~~-~h~~iv~~~~~~~~~   80 (266)
                      -...+|.+.+.||+|+||.||+|.+...    ....||+|.+.               .+++.+ +||||+++++++...
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  122 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG  122 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence            4457899999999999999999997522    12468888653               367778 899999999999999


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhcC--------------CC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCE
Q 042690           81 ECRLLVYKFMHNRSISSLLYECL--------------RP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFT  135 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~--------------~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~  135 (266)
                      +..++||||+++++|.+++....              .+      .+..++..++.++|..+++|+     ||+++.++.
T Consensus       123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~  202 (333)
T 2i1m_A          123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV  202 (333)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGE
T ss_pred             CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCe
Confidence            99999999999999999997532              12      244566677788888887776     899999999


Q ss_pred             EEEeecCcceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCCC-----------
Q 042690          136 VETSDLGLAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQGS-----------  202 (266)
Q Consensus       136 ~~l~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~~-----------  202 (266)
                      ++|+|||++......... ......+++.|+|||++.+..++.++||||||+++|+|+| |..||....           
T Consensus       203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~  282 (333)
T 2i1m_A          203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD  282 (333)
T ss_dssp             EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHH
T ss_pred             EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhc
Confidence            999999999865433222 2223456788999999888889999999999999999999 888886522           


Q ss_pred             ------CccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          203 ------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       203 ------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                            +......+.+++.+||+.||.+||++.++++.|+....
T Consensus       283 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  326 (333)
T 2i1m_A          283 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ  326 (333)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence                  23345678899999999999999999999999998754


No 136
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.3e-37  Score=267.78  Aligned_cols=209  Identities=20%  Similarity=0.238  Sum_probs=161.1

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcC-CCceeeeeeEEEeCC--eE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAH-HKNLVCLLGYHIEQE--CR   83 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~-h~~iv~~~~~~~~~~--~~   83 (266)
                      ..+|.+.+.||+|+||.||+|.+. .+++.||+|++.                .+++.+. ||||+++++++..++  ..
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDR-RTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEET-TTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEEC-CCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            358999999999999999999976 678899999763                2666776 999999999997644  68


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccc--
Q 042690           84 LLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMIN--  150 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~--  150 (266)
                      ++||||+.+ +|.+++... .+.      +..++..++.++|..+++|+     ||+++.++.+||+|||+++.....  
T Consensus        87 ~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  164 (388)
T 3oz6_A           87 YLVFDYMET-DLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR  164 (388)
T ss_dssp             EEEEECCSE-EHHHHHHHT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred             EEEecccCc-CHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence            999999984 999999753 332      44567777788888888887     999999999999999999865321  


Q ss_pred             ------------------cccccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCC--------
Q 042690          151 ------------------QTQTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSD--------  203 (266)
Q Consensus       151 ------------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~--------  203 (266)
                                        .........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+...        
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~  244 (388)
T 3oz6_A          165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII  244 (388)
T ss_dssp             CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence                              1112234578999999998876 5789999999999999999999999975221        


Q ss_pred             ------------------------------------------------------ccccchHHHHHHHhhhcCCCCCCCHH
Q 042690          204 ------------------------------------------------------PKTLEKPVMIAIQFVKEKPPLRPSLR  229 (266)
Q Consensus       204 ------------------------------------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~  229 (266)
                                                                            ......+.+++.+||+.||.+|||++
T Consensus       245 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~  324 (388)
T 3oz6_A          245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAN  324 (388)
T ss_dssp             HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHH
Confidence                                                                  03345778999999999999999999


Q ss_pred             HHHHH
Q 042690          230 IVALM  234 (266)
Q Consensus       230 ~il~~  234 (266)
                      ++++.
T Consensus       325 e~l~H  329 (388)
T 3oz6_A          325 DALKH  329 (388)
T ss_dssp             HHTTS
T ss_pred             HHhCC
Confidence            99864


No 137
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=8.1e-37  Score=258.77  Aligned_cols=206  Identities=14%  Similarity=0.161  Sum_probs=173.7

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      .|.+.+.||+|+||.||+|.+. .++..+|+|.+.                    .+++.++||||+++++++.+.+..+
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           13 FYDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cEEEeeEeeecCCEEEEEEEEC-CCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            6899999999999999999986 678889998653                    3678899999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCC----EEEEeecCcceeecc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYF----TVETSDLGLAKLLMI  149 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~----~~~l~Dfg~a~~~~~  149 (266)
                      +||||+++++|.+++.....++      +..++..++.++|..+++|+     ||+++.++    .++|+|||++.....
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~  171 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED  171 (321)
T ss_dssp             EEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCT
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCc
Confidence            9999999999999998765543      44566677788888887776     89999888    799999999987643


Q ss_pred             ccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------ccccchH
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------PKTLEKP  210 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------~~~~~~~  210 (266)
                        ........+|+.|+|||.+.+..++.++|+||||+++|+|++|..||.....                   ......+
T Consensus       172 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (321)
T 2a2a_A          172 --GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELA  249 (321)
T ss_dssp             --TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHH
T ss_pred             --cccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHH
Confidence              2223445689999999999988899999999999999999999999965221                   2244567


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 042690          211 VMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       211 ~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      .+++.+||+.||.+||+++++++
T Consensus       250 ~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          250 KDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHhc
Confidence            89999999999999999999986


No 138
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=4e-36  Score=251.20  Aligned_cols=219  Identities=14%  Similarity=0.106  Sum_probs=177.2

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhcCCCceeeeeeEE-EeCCeEEEEEEcC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVAHHKNLVCLLGYH-IEQECRLLVYKFM   90 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~~h~~iv~~~~~~-~~~~~~~lv~e~~   90 (266)
                      ++|.+.+.||+|+||.||+|.+. .+++.||+|.+.            .+++.++|++++..+..+ ......++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             cEEEEEEEEccCCCeEEEEEEEc-CCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            57999999999999999999975 678899999754            477888888766666555 5667789999999


Q ss_pred             CCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceee---cCCCEEEEeecCcceeecccccc--
Q 042690           91 HNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILL---HDYFTVETSDLGLAKLLMINQTQ--  153 (266)
Q Consensus        91 ~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili---~~~~~~~l~Dfg~a~~~~~~~~~--  153 (266)
                       +++|.+++... ..++      +..++..++.++|.++++|+     ||++   +.++.++|+|||++.........  
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~  166 (296)
T 3uzp_A           88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH  166 (296)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB
T ss_pred             -CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccc
Confidence             88999999743 3333      44566667788888887776     8999   48899999999999876533221  


Q ss_pred             ----ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------------ccc
Q 042690          154 ----TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------------PKT  206 (266)
Q Consensus       154 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------------~~~  206 (266)
                          ......+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.....                       ...
T Consensus       167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (296)
T 3uzp_A          167 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGY  246 (296)
T ss_dssp             CCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTS
T ss_pred             cccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhC
Confidence                12346789999999999998899999999999999999999999975221                       234


Q ss_pred             cchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCCC
Q 042690          207 LEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP  244 (266)
Q Consensus       207 ~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~~  244 (266)
                      +..+.+++.+||+.||.+||+++++++.|+.+......
T Consensus       247 ~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~  284 (296)
T 3uzp_A          247 PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF  284 (296)
T ss_dssp             CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence            56788999999999999999999999999998765543


No 139
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.9e-37  Score=262.47  Aligned_cols=218  Identities=19%  Similarity=0.235  Sum_probs=179.0

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcC----CCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAP----GDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~----~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      .++|.+.+.||+|+||.||+|.+..    ..+..||+|.+.               .+++.++||||+++++++.+.+..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  103 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT  103 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence            4579999999999999999998642    357789999764               377888999999999999988899


Q ss_pred             EEEEEcCCCCCHHHHHhhcC----------C------CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecC
Q 042690           84 LLVYKFMHNRSISSLLYECL----------R------PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLG  142 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~----------~------~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg  142 (266)
                      ++||||+++++|.+++....          .      ..+..++..++.++|..+++|+     ||+++.++.++|+|||
T Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg  183 (322)
T 1p4o_A          104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG  183 (322)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred             EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCc
Confidence            99999999999999997532          1      2244566677788888888877     8999999999999999


Q ss_pred             cceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCc
Q 042690          143 LAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDP  204 (266)
Q Consensus       143 ~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~  204 (266)
                      ++......... ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||...                .+.
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  263 (322)
T 1p4o_A          184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD  263 (322)
T ss_dssp             CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCT
T ss_pred             cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCC
Confidence            99865432221 2233456888999999988889999999999999999999 78888651                234


Q ss_pred             cccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          205 KTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       205 ~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      .....+.+++.+||+.||.+||++.++++.|+....
T Consensus       264 ~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          264 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            455678899999999999999999999999988754


No 140
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=1.1e-37  Score=281.11  Aligned_cols=220  Identities=22%  Similarity=0.290  Sum_probs=180.7

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      ..++|.+.+.||+|+||.||+|.+.  .+..||+|++.             ++++.++||||+++++++.. +..++|||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e  341 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE  341 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET--TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             chhhhhhheecccCCCeEEEEEEEC--CCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence            4567999999999999999999985  45679999765             37889999999999999865 66899999


Q ss_pred             cCCCCCHHHHHhhc--CCC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           89 FMHNRSISSLLYEC--LRP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        89 ~~~~~~L~~~l~~~--~~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      |+.+++|.+++...  ..+      .+..++..++.++|.++++|+     |||++.++.+||+|||+++..........
T Consensus       342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  421 (535)
T 2h8h_A          342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR  421 (535)
T ss_dssp             CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred             hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence            99999999999743  223      344566677788888888887     89999999999999999987543222222


Q ss_pred             ccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHHhh
Q 042690          156 TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~cl  218 (266)
                      ....++..|+|||.+.+..++.++||||||+++|+|+| |+.||...                .+......+.+++.+||
T Consensus       422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl  501 (535)
T 2h8h_A          422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW  501 (535)
T ss_dssp             CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence            33456788999999888889999999999999999999 88888652                13345567889999999


Q ss_pred             hcCCCCCCCHHHHHHHHHHHHhCCCC
Q 042690          219 KEKPPLRPSLRIVALMLQSILEVPSP  244 (266)
Q Consensus       219 ~~~p~~Rps~~~il~~l~~~~~~~~~  244 (266)
                      +.||.+||++++|++.|+.+.....+
T Consensus       502 ~~dP~~RPt~~~l~~~L~~~~~~~~~  527 (535)
T 2h8h_A          502 RKEPEERPTFEYLQAFLEDYFTSTEP  527 (535)
T ss_dssp             CSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred             CCChhHCcCHHHHHHHHHHHhhccCc
Confidence            99999999999999999998765444


No 141
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=5.9e-37  Score=263.50  Aligned_cols=207  Identities=14%  Similarity=0.169  Sum_probs=169.2

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      ..+|.+.+.||+|+||.||++.+. .++..||+|.+.               .+++.++||||+++++++.+++..++||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  110 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHK-PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM  110 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceeeeeecCCCCeEEEEEEEC-CCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence            357999999999999999999986 678889999753               3777889999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCCCCH------HHHHHHHHHHhhhc-Ccccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           88 KFMHNRSISSLLYECLRPTW------QQRMQDCIRDCWRT-RALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~~------~~~l~~~~~~~~~~-~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      ||+++++|.+++.....+..      ..++..++.++|+. +++|+     ||+++.++.++|+|||++.....   ...
T Consensus       111 e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---~~~  187 (360)
T 3eqc_A          111 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---SMA  187 (360)
T ss_dssp             CCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH---HC-
T ss_pred             ECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc---ccc
Confidence            99999999999987665443      34455555666653 56665     99999999999999999975432   122


Q ss_pred             ccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC--------------------------------
Q 042690          156 TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD--------------------------------  203 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~--------------------------------  203 (266)
                      ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||.....                                
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (360)
T 3eqc_A          188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF  267 (360)
T ss_dssp             ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred             cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence            345689999999999998999999999999999999999999864211                                


Q ss_pred             ---------------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ---------------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ---------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                                 ......+.+++.+||+.||.+|||++++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                                       113456789999999999999999999985


No 142
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=1.1e-36  Score=256.34  Aligned_cols=206  Identities=18%  Similarity=0.207  Sum_probs=168.0

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------------HHh---hhcCCCceeeeeeEEEeCC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------------KVV---HVAHHKNLVCLLGYHIEQE   81 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------------~~l---~~~~h~~iv~~~~~~~~~~   81 (266)
                      ++|.+.+.||+|+||.||+|.+. .+++.||+|++.                   .++   +.++||||+++++++....
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            9 SRYEPVAEIGVGAYGTVYKARDP-HSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             -CCEEEEEECCSSSCCEEEEECT-TTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEEC-CCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            58999999999999999999975 678899999763                   133   3446999999999998755


Q ss_pred             -----eEEEEEEcCCCCCHHHHHhhcCC--CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCc
Q 042690           82 -----CRLLVYKFMHNRSISSLLYECLR--PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGL  143 (266)
Q Consensus        82 -----~~~lv~e~~~~~~L~~~l~~~~~--~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~  143 (266)
                           ..++||||+.+ +|.+++.....  ++      +..++..++.++|..+++|+     ||+++.++.++|+|||+
T Consensus        88 ~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  166 (308)
T 3g33_A           88 TDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL  166 (308)
T ss_dssp             SSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred             CCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence                 47899999975 99999986543  33      44666677788888888877     99999999999999999


Q ss_pred             ceeeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC--------------------
Q 042690          144 AKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD--------------------  203 (266)
Q Consensus       144 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~--------------------  203 (266)
                      +.....  ........+|+.|+|||++.+..++.++|||||||++|+|++|+.||.....                    
T Consensus       167 a~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  244 (308)
T 3g33_A          167 ARIYSY--QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP  244 (308)
T ss_dssp             TTTSTT--CCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSC
T ss_pred             ccccCC--CcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence            986532  2223446689999999999888899999999999999999999999965211                    


Q ss_pred             ----------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ----------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ----------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                            +.....+.+++.+||+.||.+|||+.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             SSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             chhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence                                  123456778999999999999999999885


No 143
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=2.1e-36  Score=255.19  Aligned_cols=228  Identities=21%  Similarity=0.237  Sum_probs=172.9

Q ss_pred             hhhhhHhcccCceeeeeccCCCcceEEEEEEEcC--CCcceeeeeeHH----------------HHhhhcCCCceeeeee
Q 042690           14 QYENRVFGSFSHIYSLKKPCGGSFSTVYTGVLAP--GDKTNIGVKKLD----------------KVVHVAHHKNLVCLLG   75 (266)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~--~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~   75 (266)
                      .......-+.++|.+.+.||+|+||.||+|.+..  ..+..||+|.+.                .+++.++||||+++++
T Consensus        24 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~  103 (313)
T 3brb_A           24 NKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLG  103 (313)
T ss_dssp             CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCE
T ss_pred             hhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeE
Confidence            3334444456789999999999999999998753  255689999765                2677889999999999


Q ss_pred             EEEeCC-----eEEEEEEcCCCCCHHHHHhhc------CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCC
Q 042690           76 YHIEQE-----CRLLVYKFMHNRSISSLLYEC------LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDY  133 (266)
Q Consensus        76 ~~~~~~-----~~~lv~e~~~~~~L~~~l~~~------~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~  133 (266)
                      ++....     ..++||||+++++|.+++...      ..++      +..++..++.++|..+++|+     ||+++.+
T Consensus       104 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~  183 (313)
T 3brb_A          104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD  183 (313)
T ss_dssp             EEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTT
T ss_pred             EEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC
Confidence            997654     358999999999999999532      2233      44566667788888888877     8999999


Q ss_pred             CEEEEeecCcceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------
Q 042690          134 FTVETSDLGLAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------  201 (266)
Q Consensus       134 ~~~~l~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------  201 (266)
                      +.++|+|||++......... ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||...          
T Consensus       184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~  263 (313)
T 3brb_A          184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL  263 (313)
T ss_dssp             SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred             CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH
Confidence            99999999999875432221 2223456788999999988889999999999999999999 88888652          


Q ss_pred             ------CCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          202 ------SDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       202 ------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                            .+......+.+++.+||+.||.+||+++++++.|+.+.+.
T Consensus       264 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          264 HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence                  1233456788999999999999999999999999998653


No 144
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=7.8e-37  Score=262.69  Aligned_cols=204  Identities=19%  Similarity=0.221  Sum_probs=168.6

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcC-----CCceeeeeeEEEeCCeEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAH-----HKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~-----h~~iv~~~~~~~~~~~~~l   85 (266)
                      .+|.+.+.||+|+||.||+|.+. .++..||+|++.             .+++.+.     ||||+++++++...+..++
T Consensus        35 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l  113 (360)
T 3llt_A           35 NAFLVIRKMGDGTFGRVLLCQHI-DNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL  113 (360)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred             CEEEEEEEEcccCCeEEEEEEEC-CCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence            47999999999999999999986 678899999864             2566665     9999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhhcCC--CC------HHHHHHHHHHHhhhcCcccc-----ceeecC--------------------
Q 042690           86 VYKFMHNRSISSLLYECLR--PT------WQQRMQDCIRDCWRTRALAC-----RILLHD--------------------  132 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~--~~------~~~~l~~~~~~~~~~~~~h~-----nili~~--------------------  132 (266)
                      ||||+ +++|.+++.....  +.      +..++..++.++|..+++|+     ||+++.                    
T Consensus       114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~  192 (360)
T 3llt_A          114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ  192 (360)
T ss_dssp             EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred             EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccccc
Confidence            99999 8899999986542  33      45566777788888888877     899975                    


Q ss_pred             -----CCEEEEeecCcceeeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCCcc--
Q 042690          133 -----YFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPK--  205 (266)
Q Consensus       133 -----~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~~--  205 (266)
                           ++.++|+|||++.....    ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.......  
T Consensus       193 ~~~~~~~~~kl~DFG~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  268 (360)
T 3llt_A          193 IYRTKSTGIKLIDFGCATFKSD----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL  268 (360)
T ss_dssp             EEEESCCCEEECCCTTCEETTS----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             ccccCCCCEEEEeccCceecCC----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHH
Confidence                 78999999999986432    2234568999999999999899999999999999999999999996521100  


Q ss_pred             -----------------------------------------------------------ccchHHHHHHHhhhcCCCCCC
Q 042690          206 -----------------------------------------------------------TLEKPVMIAIQFVKEKPPLRP  226 (266)
Q Consensus       206 -----------------------------------------------------------~~~~~~~l~~~cl~~~p~~Rp  226 (266)
                                                                                 ....+.+++.+||+.||.+||
T Consensus       269 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp  348 (360)
T 3llt_A          269 AMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRP  348 (360)
T ss_dssp             HHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCC
Confidence                                                                       014456899999999999999


Q ss_pred             CHHHHHH
Q 042690          227 SLRIVAL  233 (266)
Q Consensus       227 s~~~il~  233 (266)
                      |++++++
T Consensus       349 ta~elL~  355 (360)
T 3llt_A          349 SPAELLK  355 (360)
T ss_dssp             CHHHHTT
T ss_pred             CHHHHhc
Confidence            9999874


No 145
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=5.2e-37  Score=258.90  Aligned_cols=220  Identities=21%  Similarity=0.240  Sum_probs=179.2

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEc----CCCcceeeeeeHH---------------HHhhhc-CCCceeeeeeEEEeCC
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLA----PGDKTNIGVKKLD---------------KVVHVA-HHKNLVCLLGYHIEQE   81 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~~~vaiK~~~---------------~~l~~~-~h~~iv~~~~~~~~~~   81 (266)
                      ..++|.+.+.||+|+||.||+|.+.    ..++..||+|.+.               .+++.+ +||||+++++++...+
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  104 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG  104 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence            4568999999999999999999863    3567889999864               256666 6899999999987754


Q ss_pred             -eEEEEEEcCCCCCHHHHHhhcCC----------------CC------HHHHHHHHHHHhhhcCcccc-----ceeecCC
Q 042690           82 -CRLLVYKFMHNRSISSLLYECLR----------------PT------WQQRMQDCIRDCWRTRALAC-----RILLHDY  133 (266)
Q Consensus        82 -~~~lv~e~~~~~~L~~~l~~~~~----------------~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~  133 (266)
                       ..++||||+++++|.+++.....                ++      +..++..++.++|..+++|+     ||+++.+
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~  184 (316)
T 2xir_A          105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK  184 (316)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC
Confidence             48999999999999999986432                22      44566677788888888877     8999999


Q ss_pred             CEEEEeecCcceeecccccc-ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCCC---------
Q 042690          134 FTVETSDLGLAKLLMINQTQ-TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQGS---------  202 (266)
Q Consensus       134 ~~~~l~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~~---------  202 (266)
                      +.++|+|||++......... ......+++.|+|||++.+..++.++||||||+++|+|+| |..||....         
T Consensus       185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~  264 (316)
T 2xir_A          185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL  264 (316)
T ss_dssp             GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred             CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHh
Confidence            99999999999865432222 2233556889999999988889999999999999999998 998986522         


Q ss_pred             --------CccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          203 --------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       203 --------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                              +......+.+++.+||+.||.+||++.++++.|+.+.+.
T Consensus       265 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence                    233456788999999999999999999999999988653


No 146
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=9.6e-37  Score=254.76  Aligned_cols=218  Identities=19%  Similarity=0.192  Sum_probs=177.3

Q ss_pred             ccCceeeee-ccCCCcceEEEEEEEc-CCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           22 SFSHIYSLK-KPCGGSFSTVYTGVLA-PGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        22 ~~~~~~~~~-~ig~G~~g~V~~~~~~-~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      +...|.+.+ .||+|+||.||+|.+. ...+..||+|.+.                .+++.++||||+++++++ ..+..
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            456888888 9999999999999753 2457889998764                367788999999999998 56678


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      ++||||+++++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.++|+|||++........
T Consensus        93 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  172 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN  172 (291)
T ss_dssp             EEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred             EEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence            89999999999999998766544      44556666788888877776     89999999999999999987643322


Q ss_pred             c--ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHH
Q 042690          153 Q--TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMI  213 (266)
Q Consensus       153 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l  213 (266)
                      .  ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...                .+......+.++
T Consensus       173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  252 (291)
T 1xbb_A          173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDL  252 (291)
T ss_dssp             EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence            2  1222345688999999988888999999999999999999 99998752                234456788899


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          214 AIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       214 ~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      +.+||+.||.+||++.++++.|+.+..
T Consensus       253 i~~~l~~dp~~Rps~~~l~~~L~~~~~  279 (291)
T 1xbb_A          253 MNLCWTYDVENRPGFAAVELRLRNYYY  279 (291)
T ss_dssp             HHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            999999999999999999999998854


No 147
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=6.4e-37  Score=260.34  Aligned_cols=210  Identities=17%  Similarity=0.251  Sum_probs=166.9

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ..+++|.+.+.||+|+||.||+|.+. .+++.||+|++.                .+++.++||||+++++++.++...+
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDT-VTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEET-TTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEEC-CCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            34668999999999999999999976 678899999764                3788899999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeec-----CCCEEEEeecCcceeec
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLH-----DYFTVETSDLGLAKLLM  148 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~-----~~~~~~l~Dfg~a~~~~  148 (266)
                      +||||+.+ +|.+++.....+.      +..++..++.++|..+++|+     ||+++     .++.++|+|||++....
T Consensus       110 lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~  188 (329)
T 3gbz_A          110 LIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG  188 (329)
T ss_dssp             EEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred             EEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence            99999985 9999998766554      44566677788888888887     89994     55569999999997653


Q ss_pred             cccccccccccCCCCcCCccccCCC-CCCcccchhhHHHHHHHHHhCCCcccCCCCc-----------------------
Q 042690          149 INQTQTLTGMRETKGYLPPEWFRNM-PVTVKVDVYSFGVMLLEIISCRCVERQGSDP-----------------------  204 (266)
Q Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~-----------------------  204 (266)
                      .. ........+|..|+|||++.+. .++.++|||||||++|+|++|+.||......                       
T Consensus       189 ~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (329)
T 3gbz_A          189 IP-IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA  267 (329)
T ss_dssp             ------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             Cc-ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhh
Confidence            22 2233345679999999988764 4899999999999999999999998652210                       


Q ss_pred             ----------------------cccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          205 ----------------------KTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       205 ----------------------~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                            .....+.+++.+||+.||.+|||++++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             STTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence                                  03456778999999999999999999875


No 148
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.7e-36  Score=254.44  Aligned_cols=209  Identities=15%  Similarity=0.154  Sum_probs=169.4

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEcC
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKFM   90 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   90 (266)
                      ...|.+.+.||+|+||.||+|.+. .++..||+|.+.            .+++.++||||+++++++...+..++||||+
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHK-ETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC  106 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEET-TTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hhhhhhheeeccCCCeEEEEEEEC-CCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence            457999999999999999999975 568899999764            4778889999999999999999999999999


Q ss_pred             CCCCHHHHHhh-cCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccccccc
Q 042690           91 HNRSISSLLYE-CLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTLTGM  158 (266)
Q Consensus        91 ~~~~L~~~l~~-~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~~~  158 (266)
                      .+++|.+++.. ...++      +..++..++.++|..+++|.     ||+++.++.++|+|||++...... .......
T Consensus       107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~  185 (314)
T 3com_A          107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT-MAKRNTV  185 (314)
T ss_dssp             TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT-BSCBCCC
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh-ccccCcc
Confidence            99999999973 33343      44556666688887777776     899999999999999999875422 2223345


Q ss_pred             cCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------CccccchHHHHHHHhhhc
Q 042690          159 RETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLEKPVMIAIQFVKE  220 (266)
Q Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~~~~~l~~~cl~~  220 (266)
                      .++..|+|||.+.+..++.++||||||+++|+|++|+.||....                  +......+.+++.+||+.
T Consensus       186 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  265 (314)
T 3com_A          186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVK  265 (314)
T ss_dssp             CSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCS
T ss_pred             CCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccC
Confidence            68999999999998889999999999999999999999986521                  223456788999999999


Q ss_pred             CCCCCCCHHHHHH
Q 042690          221 KPPLRPSLRIVAL  233 (266)
Q Consensus       221 ~p~~Rps~~~il~  233 (266)
                      ||.+||++.++++
T Consensus       266 dp~~Rpt~~~ll~  278 (314)
T 3com_A          266 SPEQRATATQLLQ  278 (314)
T ss_dssp             CTTTSCCHHHHTT
T ss_pred             ChhhCcCHHHHHh
Confidence            9999999999975


No 149
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=4.7e-37  Score=254.92  Aligned_cols=213  Identities=22%  Similarity=0.241  Sum_probs=171.2

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhcCCCceeeeeeEEEeC-CeEEEEE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVAHHKNLVCLLGYHIEQ-ECRLLVY   87 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~~h~~iv~~~~~~~~~-~~~~lv~   87 (266)
                      -+.++|.+.+.||+|+||.||++.+   .+..||+|.+.            .+++.++||||+++++++... +..++||
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           18 LNMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEE---TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             CChhhceEEeEEecCCCceEEEEEE---cCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            4567999999999999999999987   57789999764            377888999999999997554 4689999


Q ss_pred             EcCCCCCHHHHHhhcCC--------CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           88 KFMHNRSISSLLYECLR--------PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~--------~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      ||+++++|.+++.....        ..+..++..++.++|..+++|+     ||+++.++.++|+|||++......    
T Consensus        95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----  170 (278)
T 1byg_A           95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----  170 (278)
T ss_dssp             CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc----
Confidence            99999999999975432        2344566677788888888876     899999999999999999764321    


Q ss_pred             cccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHHh
Q 042690          155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQF  217 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~c  217 (266)
                      .....++..|+|||.+.+..++.++|+||||+++|+|+| |+.||...                .+......+.+++.+|
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  250 (278)
T 1byg_A          171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNC  250 (278)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHH
Confidence            122346889999999988889999999999999999998 99888652                1234456788999999


Q ss_pred             hhcCCCCCCCHHHHHHHHHHHHh
Q 042690          218 VKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       218 l~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      |+.||.+||++.++++.|+.+..
T Consensus       251 l~~~p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          251 WHLDAAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcCChhhCCCHHHHHHHHHHHHh
Confidence            99999999999999999998865


No 150
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=5.8e-37  Score=271.97  Aligned_cols=208  Identities=20%  Similarity=0.213  Sum_probs=165.5

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeC------
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQ------   80 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~------   80 (266)
                      .++|.+.+.||+|+||+||+|.+. .+++.||+|++.                .+++.++||||+++++++...      
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDA-VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEET-TTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEEC-CCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            467999999999999999999976 678899999873                377889999999999999654      


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhcCC----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           81 ECRLLVYKFMHNRSISSLLYECLR----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      ...++||||+.+ +|.+.+...-.    ..+..++..++.++|..+++|+     ||+++.++.+||+|||+++....  
T Consensus       140 ~~~~lv~E~~~~-~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~--  216 (464)
T 3ttj_A          140 QDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--  216 (464)
T ss_dssp             CEEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-------
T ss_pred             CeEEEEEeCCCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC--
Confidence            357999999976 67777753211    2355677778899998888887     99999999999999999987542  


Q ss_pred             ccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCCcc--------------------------
Q 042690          152 TQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPK--------------------------  205 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~~--------------------------  205 (266)
                      ........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+....+                          
T Consensus       217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~  296 (464)
T 3ttj_A          217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN  296 (464)
T ss_dssp             CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHH
T ss_pred             CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhh
Confidence            223345678999999999999899999999999999999999999997522000                          


Q ss_pred             -------------------------------ccchHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          206 -------------------------------TLEKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       206 -------------------------------~~~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                                                     ....+.+++.+||+.||.+|||++|+++.
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                                           02357889999999999999999999853


No 151
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.1e-36  Score=254.94  Aligned_cols=219  Identities=21%  Similarity=0.312  Sum_probs=172.4

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCC--CcceeeeeeHH---------------HHhhhcCCCceeeeeeEEE-eCCeEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPG--DKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHI-EQECRL   84 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~--~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~-~~~~~~   84 (266)
                      ...|.+.+.||+|+||.||+|.+...  ....+++|.+.               .+++.++||||+++++++. .++..+
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  103 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence            34689999999999999999997522  33457888754               3778899999999999865 456788


Q ss_pred             EEEEcCCCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           85 LVYKFMHNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      +||||+++++|.+++..... ++      +..++..++.++|..+++|+     ||+++.++.++|+|||++........
T Consensus       104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  183 (298)
T 3f66_A          104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY  183 (298)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred             EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccch
Confidence            99999999999999975332 33      44566677788888888887     89999999999999999987543221


Q ss_pred             ---cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCC-CcccCCC----------------CccccchHHH
Q 042690          153 ---QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCR-CVERQGS----------------DPKTLEKPVM  212 (266)
Q Consensus       153 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~-~p~~~~~----------------~~~~~~~~~~  212 (266)
                         .......+++.|+|||.+.+..++.++|+||||+++|+|++|. +||....                +......+.+
T Consensus       184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  263 (298)
T 3f66_A          184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE  263 (298)
T ss_dssp             CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHH
Confidence               1223355678899999998888999999999999999999954 5554411                2334567889


Q ss_pred             HHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          213 IAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       213 l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      ++.+||+.||.+||+++++++.|+.+...
T Consensus       264 li~~~l~~~p~~Rps~~ell~~L~~~~~~  292 (298)
T 3f66_A          264 VMLKCWHPKAEMRPSFSELVSRISAIFST  292 (298)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999999999999998764


No 152
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=8.8e-37  Score=275.23  Aligned_cols=209  Identities=22%  Similarity=0.266  Sum_probs=176.2

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ...+|.+.+.||+|+||.||+|.++ .++..||+|++.                 .+++.++||||+++++++.+.+..+
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~-~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  260 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVR-ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC  260 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence            3457999999999999999999986 678899999763                 3778899999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCC--CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           85 LVYKFMHNRSISSLLYECLR--PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~--~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      +||||+++|+|.+++.....  ++      +..++..++.++|.++++|+     ||+++.+|.+||+|||++...... 
T Consensus       261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~-  339 (576)
T 2acx_A          261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-  339 (576)
T ss_dssp             EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccC-
Confidence            99999999999999976443  33      34556677788888888887     999999999999999999876422 


Q ss_pred             ccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC-------------------CccccchHHH
Q 042690          152 TQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS-------------------DPKTLEKPVM  212 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-------------------~~~~~~~~~~  212 (266)
                       .......||+.|+|||++.+..++.++|+|||||++|+|++|+.||....                   +......+.+
T Consensus       340 -~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~d  418 (576)
T 2acx_A          340 -QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARS  418 (576)
T ss_dssp             -CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred             -ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHHH
Confidence             22334579999999999998889999999999999999999999997632                   2234567788


Q ss_pred             HHHHhhhcCCCCCC-----CHHHHHH
Q 042690          213 IAIQFVKEKPPLRP-----SLRIVAL  233 (266)
Q Consensus       213 l~~~cl~~~p~~Rp-----s~~~il~  233 (266)
                      ++.+||+.||.+||     +++|+++
T Consensus       419 LI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          419 LCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            99999999999999     6788864


No 153
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=1.6e-36  Score=280.03  Aligned_cols=209  Identities=18%  Similarity=0.198  Sum_probs=176.3

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH-----------------Hhhhc-CCCceeeeeeEEEeCCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-----------------VVHVA-HHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~-----------------~l~~~-~h~~iv~~~~~~~~~~~~   83 (266)
                      .+++|.+++.||+|+||.||+|.++ .+++.||+|++..                 ++..+ +||+|+++++++.+.+.+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~-~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~  417 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL  417 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEES-SSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEEC-CCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence            4678999999999999999999986 6788899998642                 34444 699999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      |+||||+++|+|.+++.....+.      +..++..++.++|..+++|+     |||++.+|.+||+|||+++.... ..
T Consensus       418 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~-~~  496 (674)
T 3pfq_A          418 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW-DG  496 (674)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC-TT
T ss_pred             EEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeecccc-CC
Confidence            99999999999999998766654      44566677788888888887     99999999999999999986432 22


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHh
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQF  217 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~c  217 (266)
                      .......||+.|+|||++.+..++.++|+||||+++|||++|+.||...               .+......+.+++.+|
T Consensus       497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~l  576 (674)
T 3pfq_A          497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGL  576 (674)
T ss_dssp             CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHHHHHH
T ss_pred             cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHH
Confidence            3344567999999999999999999999999999999999999999762               2344667888999999


Q ss_pred             hhcCCCCCCCH-----HHHH
Q 042690          218 VKEKPPLRPSL-----RIVA  232 (266)
Q Consensus       218 l~~~p~~Rps~-----~~il  232 (266)
                      |+.||.+||++     ++|+
T Consensus       577 L~~dP~~R~~~~~~~~~ei~  596 (674)
T 3pfq_A          577 MTKHPGKRLGCGPEGERDIK  596 (674)
T ss_dssp             SCSSSTTCTTCSTTHHHHHH
T ss_pred             ccCCHHHCCCCCCCcHHHHh
Confidence            99999999997     6664


No 154
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=2.8e-36  Score=249.80  Aligned_cols=209  Identities=15%  Similarity=0.214  Sum_probs=166.6

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      .++|.+.+.||+|+||.||+|.+. .+++.|++|.+.                 ..++.++||||+++++++...+..++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQ-LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM   88 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEEC-CCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence            568999999999999999999985 578899999753                 26778899999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           86 VYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      ||||+++++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.++|+|||++......  ..
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~  166 (276)
T 2h6d_A           89 VMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EF  166 (276)
T ss_dssp             EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----
T ss_pred             EEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC--cc
Confidence            999999999999998765544      44556666677887777776     899999999999999999875422  22


Q ss_pred             cccccCCCCcCCccccCCCCC-CcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhh
Q 042690          155 LTGMRETKGYLPPEWFRNMPV-TVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFV  218 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl  218 (266)
                      .....+++.|+|||.+.+..+ +.++|+||||+++|+|++|+.||...               .+......+.+++.+||
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  246 (276)
T 2h6d_A          167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHML  246 (276)
T ss_dssp             ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHHHHHc
Confidence            234567899999999887665 68999999999999999999998652               22334567889999999


Q ss_pred             hcCCCCCCCHHHHHHH
Q 042690          219 KEKPPLRPSLRIVALM  234 (266)
Q Consensus       219 ~~~p~~Rps~~~il~~  234 (266)
                      +.||.+||+++++++.
T Consensus       247 ~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          247 QVDPLKRATIKDIREH  262 (276)
T ss_dssp             CSSGGGSCCHHHHHHS
T ss_pred             cCChhhCCCHHHHHhC
Confidence            9999999999999873


No 155
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.1e-36  Score=253.15  Aligned_cols=217  Identities=20%  Similarity=0.304  Sum_probs=173.2

Q ss_pred             ceeeeeccCCCcceEEEEEEEcC--CCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeE-EEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAP--GDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECR-LLV   86 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~--~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~-~lv   86 (266)
                      .|.+.+.||+|+||.||+|.+..  ..+..+|+|.+.               .+++.++||||+++++++.+.+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            56677999999999999999742  233468888764               377788999999999999876654 899


Q ss_pred             EEcCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc---
Q 042690           87 YKFMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ---  151 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~---  151 (266)
                      |||+.+++|.+++.... .++      +..++..++.++|..+++|+     ||+++.++.++|+|||++.......   
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  181 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS  181 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence            99999999999997633 233      44566677788888888877     8999999999999999998653221   


Q ss_pred             ccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC-----------------CCccccchHHHHH
Q 042690          152 TQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG-----------------SDPKTLEKPVMIA  214 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~-----------------~~~~~~~~~~~l~  214 (266)
                      ........++..|+|||.+.+..++.++||||||+++|+|++|..|+...                 .+......+.+++
T Consensus       182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  261 (298)
T 3pls_A          182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVM  261 (298)
T ss_dssp             SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHH
Confidence            12223356788999999999989999999999999999999966554331                 1233456788999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          215 IQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      .+||+.||.+||+++++++.|+.+.+.
T Consensus       262 ~~~l~~~p~~Rps~~~ll~~l~~~~~~  288 (298)
T 3pls_A          262 QQCWEADPAVRPTFRVLVGEVEQIVSA  288 (298)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            999999999999999999999998654


No 156
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=1.9e-36  Score=272.14  Aligned_cols=209  Identities=21%  Similarity=0.263  Sum_probs=175.1

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      ....|.+.+.||+|+||.||+|.++ .+++.||+|++.                 .+++.++||||+++++++.+....+
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~-~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  261 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMK-ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC  261 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE
Confidence            3568999999999999999999986 678899999874                 3677889999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcC----CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           85 LVYKFMHNRSISSLLYECL----RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~----~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                      +||||+++|+|.+++....    .+.      +..++..++.++|.++++|+     ||+++.+|.+||+|||++.....
T Consensus       262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence            9999999999999997543    233      34566777788888888887     99999999999999999987643


Q ss_pred             ccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC-------------------CccccchH
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS-------------------DPKTLEKP  210 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-------------------~~~~~~~~  210 (266)
                      .. .......||+.|+|||++.+..++.++|+|||||++|+|++|+.||....                   +......+
T Consensus       342 ~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~~  420 (543)
T 3c4z_A          342 GQ-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPAS  420 (543)
T ss_dssp             TC-CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred             CC-cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCHHH
Confidence            22 22234578999999999999899999999999999999999999997521                   23455677


Q ss_pred             HHHHHHhhhcCCCCCCCH-----HHHH
Q 042690          211 VMIAIQFVKEKPPLRPSL-----RIVA  232 (266)
Q Consensus       211 ~~l~~~cl~~~p~~Rps~-----~~il  232 (266)
                      .+++.+||+.||.+||++     ++++
T Consensus       421 ~~li~~lL~~dP~~R~~~~~~~a~ei~  447 (543)
T 3c4z_A          421 KDFCEALLQKDPEKRLGFRDGSCDGLR  447 (543)
T ss_dssp             HHHHHHHSCSSGGGSCCCBTTBSHHHH
T ss_pred             HHHHHHhccCCHhHCCCCcccCHHHHH
Confidence            889999999999999975     5665


No 157
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.4e-37  Score=264.60  Aligned_cols=219  Identities=21%  Similarity=0.309  Sum_probs=166.2

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCC--CcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEe-CCeEEEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPG--DKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIE-QECRLLV   86 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~--~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~-~~~~~lv   86 (266)
                      .|.+.+.||+|+||.||+|.+...  .+..+|+|.+.               .+++.++||||+++++++.. ++..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            577889999999999999997522  24567888764               26778899999999998754 5578899


Q ss_pred             EEcCCCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc-
Q 042690           87 YKFMHNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ-  153 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~-  153 (266)
                      |||+++++|.+++..... ++      +..++..++.++|..+++|+     ||+++.++.+||+|||+++........ 
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~  249 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS  249 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccccc
Confidence            999999999999975433 33      34566677788888888887     899999999999999999865322211 


Q ss_pred             --ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCCC----------------CccccchHHHHH
Q 042690          154 --TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQGS----------------DPKTLEKPVMIA  214 (266)
Q Consensus       154 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~~----------------~~~~~~~~~~l~  214 (266)
                        ......+++.|+|||.+.+..++.++||||||+++|+|+| |.+||....                +......+.+++
T Consensus       250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li  329 (373)
T 3c1x_A          250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVM  329 (373)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence              1223456788999999988889999999999999999999 566775421                233456788999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          215 IQFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                      .+||+.||.+||+++++++.|+.+...-.
T Consensus       330 ~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          330 LKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             HHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999976543


No 158
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=2.3e-36  Score=253.77  Aligned_cols=209  Identities=16%  Similarity=0.205  Sum_probs=174.8

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      -..|.+.+.||+|+||.||+|.+. .++..||+|.+.               .+++.++||||+++++++..+...++||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDN-RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEEC-CCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence            346899999999999999999975 678899999763               3777889999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCCC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccccc
Q 042690           88 KFMHNRSISSLLYECLRP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTLT  156 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~  156 (266)
                      ||+++++|.+++... .+      .+..++..++.++|..+++|+     ||+++.++.++|+|||++...... .....
T Consensus       100 e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~  177 (303)
T 3a7i_A          100 EYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRN  177 (303)
T ss_dssp             ECCTTEEHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTT-BCCBC
T ss_pred             EeCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcc-ccccC
Confidence            999999999999753 33      344566666788888777776     899999999999999999876432 22233


Q ss_pred             cccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC----------------CCccccchHHHHHHHhhhc
Q 042690          157 GMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG----------------SDPKTLEKPVMIAIQFVKE  220 (266)
Q Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~----------------~~~~~~~~~~~l~~~cl~~  220 (266)
                      ...++..|+|||.+.+..++.++||||||+++|+|++|+.||...                ........+.+++.+||+.
T Consensus       178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  257 (303)
T 3a7i_A          178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNK  257 (303)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCS
T ss_pred             ccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHcCC
Confidence            456899999999999888999999999999999999999998652                1234456788999999999


Q ss_pred             CCCCCCCHHHHHHH
Q 042690          221 KPPLRPSLRIVALM  234 (266)
Q Consensus       221 ~p~~Rps~~~il~~  234 (266)
                      ||.+||+++++++.
T Consensus       258 dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          258 EPSFRPTAKELLKH  271 (303)
T ss_dssp             SGGGSCCHHHHTTC
T ss_pred             ChhhCcCHHHHhhC
Confidence            99999999999864


No 159
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=3.2e-36  Score=268.93  Aligned_cols=207  Identities=16%  Similarity=0.162  Sum_probs=172.6

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      ++|.+.+.||+|+||+||+|.++ .+++.||+|++.                ++++.++||||+++++++.+.+..++||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEET-TTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEEEC-CCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            37999999999999999999986 678899999863                3788999999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeec---CCCEEEEeecCcceeecccccc
Q 042690           88 KFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLH---DYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~---~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      ||+.+++|.+++.....++      +..++..++.++|..+++|+     ||+++   .++.++|+|||++.....  ..
T Consensus       101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~--~~  178 (486)
T 3mwu_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NT  178 (486)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC--C-
T ss_pred             EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC--CC
Confidence            9999999999997766544      45666677788888888887     89995   456799999999986542  22


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------ccccchHHHHH
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------PKTLEKPVMIA  214 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------~~~~~~~~~l~  214 (266)
                      ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.....                   ...+..+.+++
T Consensus       179 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  257 (486)
T 3mwu_A          179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI  257 (486)
T ss_dssp             ---CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHH
T ss_pred             ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHH
Confidence            3345678999999999876 589999999999999999999999976211                   22456788999


Q ss_pred             HHhhhcCCCCCCCHHHHHHH
Q 042690          215 IQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~~  234 (266)
                      .+||+.||.+|||+.++++.
T Consensus       258 ~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          258 RKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             HHHTCSSTTTSCCHHHHHHC
T ss_pred             HHHcCCChhhCcCHHHHhcC
Confidence            99999999999999999864


No 160
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=2.6e-36  Score=254.89  Aligned_cols=222  Identities=18%  Similarity=0.175  Sum_probs=175.9

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEe----CCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIE----QECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~----~~~~   83 (266)
                      +..+|.+.+.||+|+||.||++... .++..||+|++.              .+++.++||||+++++++..    ....
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGL-HDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEET-TTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEec-CCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence            3467999999999999999999975 578899999652              37788999999999999873    3468


Q ss_pred             EEEEEcCCCCCHHHHHhhc----CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeec
Q 042690           84 LLVYKFMHNRSISSLLYEC----LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLM  148 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~----~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~  148 (266)
                      ++||||+.+++|.+++...    ..++      +..++..++.++|..+++|+     ||+++.++.++|+|||++....
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~  185 (317)
T 2buj_A          106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC  185 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred             EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence            8999999999999999752    3333      44566667788888887777     8999999999999999987643


Q ss_pred             ccccc--------ccccccCCCCcCCccccCCCC---CCcccchhhHHHHHHHHHhCCCcccC-----------------
Q 042690          149 INQTQ--------TLTGMRETKGYLPPEWFRNMP---VTVKVDVYSFGVMLLEIISCRCVERQ-----------------  200 (266)
Q Consensus       149 ~~~~~--------~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~slG~i~~~l~tg~~p~~~-----------------  200 (266)
                      .....        ......+++.|+|||.+.+..   ++.++||||||+++|+|++|+.||..                 
T Consensus       186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~  265 (317)
T 2buj_A          186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS  265 (317)
T ss_dssp             EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--
T ss_pred             cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCC
Confidence            21110        112245689999999987654   68899999999999999999999843                 


Q ss_pred             -CCCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCCC
Q 042690          201 -GSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPSP  244 (266)
Q Consensus       201 -~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~~  244 (266)
                       ...+.....+.+++.+||+.||.+||+++++++.|+.+...+..
T Consensus       266 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~  310 (317)
T 2buj_A          266 IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG  310 (317)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred             CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence             11234567889999999999999999999999999988765443


No 161
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=1.1e-36  Score=252.24  Aligned_cols=210  Identities=19%  Similarity=0.250  Sum_probs=173.5

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      .++|.+.+.||+|+||.||+|.+. .++..||+|.+.               .+++.++||||+++++++.+++..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEEC-CCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence            358999999999999999999976 578889999753               3677889999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc-ccc
Q 042690           88 KFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT-QTL  155 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~-~~~  155 (266)
                      ||+++++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.++|+|||++........ ...
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  164 (276)
T 2yex_A           85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL  164 (276)
T ss_dssp             ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred             EecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence            9999999999997654443      44556666788887777776     89999999999999999987543222 223


Q ss_pred             ccccCCCCcCCccccCCCCC-CcccchhhHHHHHHHHHhCCCcccCCCC------------------ccccchHHHHHHH
Q 042690          156 TGMRETKGYLPPEWFRNMPV-TVKVDVYSFGVMLLEIISCRCVERQGSD------------------PKTLEKPVMIAIQ  216 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~i~~~l~tg~~p~~~~~~------------------~~~~~~~~~l~~~  216 (266)
                      ....++..|+|||.+.+..+ +.++|+||||+++|+|++|+.||.....                  ......+.+++.+
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (276)
T 2yex_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHK  244 (276)
T ss_dssp             CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHH
T ss_pred             cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHH
Confidence            44668999999999887665 7789999999999999999999965221                  2345677889999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 042690          217 FVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       217 cl~~~p~~Rps~~~il~  233 (266)
                      ||+.||.+||+++++++
T Consensus       245 ~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          245 ILVENPSARITIPDIKK  261 (276)
T ss_dssp             HSCSSTTTSCCHHHHTT
T ss_pred             HCCCCchhCCCHHHHhc
Confidence            99999999999999876


No 162
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=1.1e-36  Score=259.42  Aligned_cols=209  Identities=16%  Similarity=0.222  Sum_probs=176.1

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      ..+|.+.+.||+|+||.||++.+. .++..+++|.+.                 .+++.++||||+++++++.+.+..++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            457999999999999999999986 667889998753                 36778899999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           86 VYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      ||||+.+++|.+++.....+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++...... ...
T Consensus       119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-~~~  197 (335)
T 2owb_A          119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD-GER  197 (335)
T ss_dssp             EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST-TCC
T ss_pred             EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccC-ccc
Confidence            999999999999998765544      44556666788888888777     899999999999999999875422 222


Q ss_pred             cccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhhh
Q 042690          155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFVK  219 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl~  219 (266)
                      .....++..|+|||++.+..++.++||||||+++|+|++|+.||...               .+......+.+++.+||+
T Consensus       198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  277 (335)
T 2owb_A          198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ  277 (335)
T ss_dssp             BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHTC
T ss_pred             ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcc
Confidence            33456899999999998888999999999999999999999998752               233445677899999999


Q ss_pred             cCCCCCCCHHHHHH
Q 042690          220 EKPPLRPSLRIVAL  233 (266)
Q Consensus       220 ~~p~~Rps~~~il~  233 (266)
                      .||.+||+++++++
T Consensus       278 ~dp~~Rps~~ell~  291 (335)
T 2owb_A          278 TDPTARPTINELLN  291 (335)
T ss_dssp             SSGGGSCCGGGGGG
T ss_pred             CChhHCcCHHHHhc
Confidence            99999999999986


No 163
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=2.4e-36  Score=258.71  Aligned_cols=203  Identities=19%  Similarity=0.185  Sum_probs=168.1

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      .|.+.+.||+|+||.||+|.+. .++..||+|++.                 ++++.++||||+++++++..++..++||
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             heeeeeEEccCCCEEEEEEEEc-cCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            5889999999999999999975 578899999753                 3678899999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           88 KFMHNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        88 e~~~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      ||+. |+|.+++... ..++      +..++..++.++|..+++|+     ||+++.++.+||+|||++.....     .
T Consensus       134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-----~  207 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----A  207 (348)
T ss_dssp             ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----B
T ss_pred             ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-----C
Confidence            9997 5888888643 3343      34556666788888888877     89999999999999999976532     2


Q ss_pred             ccccCCCCcCCccccC---CCCCCcccchhhHHHHHHHHHhCCCcccCCC-----------------CccccchHHHHHH
Q 042690          156 TGMRETKGYLPPEWFR---NMPVTVKVDVYSFGVMLLEIISCRCVERQGS-----------------DPKTLEKPVMIAI  215 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-----------------~~~~~~~~~~l~~  215 (266)
                      ....||+.|+|||++.   +..++.++||||||+++|+|++|+.||....                 .......+.+++.
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  287 (348)
T 1u5q_A          208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVD  287 (348)
T ss_dssp             CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHH
T ss_pred             CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence            2456899999999874   5678999999999999999999999986521                 2234567889999


Q ss_pred             HhhhcCCCCCCCHHHHHHH
Q 042690          216 QFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       216 ~cl~~~p~~Rps~~~il~~  234 (266)
                      +||+.||.+||+++++++.
T Consensus       288 ~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          288 SCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHTCSSGGGSCCHHHHTTC
T ss_pred             HHcccChhhCcCHHHHhhC
Confidence            9999999999999999864


No 164
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.8e-36  Score=277.16  Aligned_cols=216  Identities=17%  Similarity=0.208  Sum_probs=171.3

Q ss_pred             ceeeee-ccCCCcceEEEEEEEcC-CCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           25 HIYSLK-KPCGGSFSTVYTGVLAP-GDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        25 ~~~~~~-~ig~G~~g~V~~~~~~~-~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      ++.+.+ .||+|+||.||+|.++. ..+..||+|++.               ++++.++||||+++++++.. +..++||
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~  414 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM  414 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred             ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence            445555 89999999999998752 356679999875               37788999999999999876 5589999


Q ss_pred             EcCCCCCHHHHHhhcCC-CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc--
Q 042690           88 KFMHNRSISSLLYECLR-PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ--  153 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~-~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~--  153 (266)
                      ||+.+|+|.+++..... +.      +..++..++.++|..+++|+     |||++.++.+||+|||+++........  
T Consensus       415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~  494 (613)
T 2ozo_A          415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  494 (613)
T ss_dssp             ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred             EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence            99999999999975432 33      44556667788888888887     999999999999999999875432221  


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHH
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQ  216 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~  216 (266)
                      ......+++.|+|||++.+..++.++||||||+++|||+| |+.||...                .+......+.+++.+
T Consensus       495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~  574 (613)
T 2ozo_A          495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSD  574 (613)
T ss_dssp             -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred             eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence            1122345688999999988889999999999999999998 99999762                233456788899999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          217 FVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       217 cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                      ||+.||.+||+++++++.|+.+...
T Consensus       575 cl~~dP~~RPs~~~l~~~L~~~~~~  599 (613)
T 2ozo_A          575 CWIYKWEDRPDFLTVEQRMRACYYS  599 (613)
T ss_dssp             TTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HcCCChhHCcCHHHHHHHHHHHHHH
Confidence            9999999999999999999988544


No 165
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=3.1e-36  Score=253.14  Aligned_cols=206  Identities=17%  Similarity=0.171  Sum_probs=173.4

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEc
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKF   89 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   89 (266)
                      ++|.+.+.||+|+||.||++.+. .+++.||+|.+.              .+++.++||||+++++++.+.+..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQR-LTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             ccceeeeeccCCCCceEEEEEEC-CCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            47999999999999999999976 578889999753              378889999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceee---cCCCEEEEeecCcceeecccccccc
Q 042690           90 MHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILL---HDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        90 ~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili---~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      +++++|.+++.....++      +..++..++.++|..+++|+     ||++   +.++.++|+|||++.....   ...
T Consensus        88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~---~~~  164 (304)
T 2jam_A           88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN---GIM  164 (304)
T ss_dssp             CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC---BTT
T ss_pred             CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC---Ccc
Confidence            99999999998766544      44556667788888888776     8999   7789999999999976432   122


Q ss_pred             ccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC-------------------CccccchHHHHHHH
Q 042690          156 TGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS-------------------DPKTLEKPVMIAIQ  216 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-------------------~~~~~~~~~~l~~~  216 (266)
                      ....+++.|+|||.+.+..++.++||||||+++|+|++|..||....                   .......+.+++.+
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  244 (304)
T 2jam_A          165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICH  244 (304)
T ss_dssp             HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHH
T ss_pred             ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHH
Confidence            33457999999999998889999999999999999999999986521                   12345678899999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 042690          217 FVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       217 cl~~~p~~Rps~~~il~  233 (266)
                      ||+.||.+||+++++++
T Consensus       245 ~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          245 LLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHCSSTTTSCCHHHHHT
T ss_pred             HcCCChhHCcCHHHHhc
Confidence            99999999999999986


No 166
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=3.4e-36  Score=251.70  Aligned_cols=210  Identities=16%  Similarity=0.216  Sum_probs=176.2

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      .++|.+.+.||+|+||.||++.+. .++..+|+|.+.                 .+++.++||||+++++++.+.+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   92 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV   92 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEEC-CCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence            458999999999999999999986 567889998642                 36778899999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           86 VYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      ||||+.+++|.+++.....++      +..++..++.++|..+++|+     ||+++.++.++|+|||++...... ...
T Consensus        93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-~~~  171 (294)
T 2rku_A           93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD-GER  171 (294)
T ss_dssp             EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST-TCC
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC-ccc
Confidence            999999999999998765544      44556666688888777776     899999999999999999875422 222


Q ss_pred             cccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHHHHHHHhhh
Q 042690          155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPVMIAIQFVK  219 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~~l~~~cl~  219 (266)
                      .....+++.|+|||.+.+..++.++|+||||+++|+|++|+.||...               .+......+.+++.+||+
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  251 (294)
T 2rku_A          172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ  251 (294)
T ss_dssp             BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTC
T ss_pred             cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHHHHcc
Confidence            33456899999999998888999999999999999999999998652               233445678899999999


Q ss_pred             cCCCCCCCHHHHHHH
Q 042690          220 EKPPLRPSLRIVALM  234 (266)
Q Consensus       220 ~~p~~Rps~~~il~~  234 (266)
                      .||.+||+++++++.
T Consensus       252 ~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          252 TDPTARPTINELLND  266 (294)
T ss_dssp             SSGGGSCCGGGGGGS
T ss_pred             cChhhCcCHHHHhhC
Confidence            999999999999863


No 167
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.7e-36  Score=257.90  Aligned_cols=219  Identities=12%  Similarity=0.077  Sum_probs=177.1

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCC-------CcceeeeeeHH---------HHhhhcCCCceee---------------
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPG-------DKTNIGVKKLD---------KVVHVAHHKNLVC---------------   72 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~-------~~~~vaiK~~~---------~~l~~~~h~~iv~---------------   72 (266)
                      ++|.+.+.||+|+||.||+|.+...       .+..||+|.+.         ++++.++||||++               
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~  121 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT  121 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence            5899999999999999999998632       47899999764         4788889999987               


Q ss_pred             eeeEEEe-CCeEEEEEEcCCCCCHHHHHhhc--CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCC--EE
Q 042690           73 LLGYHIE-QECRLLVYKFMHNRSISSLLYEC--LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYF--TV  136 (266)
Q Consensus        73 ~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~--~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~--~~  136 (266)
                      +++++.. +...++||||+ +++|.+++...  ..++      +..++..++.++|..+++|+     ||+++.++  .+
T Consensus       122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~  200 (352)
T 2jii_A          122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQV  200 (352)
T ss_dssp             CCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEE
T ss_pred             hhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceE
Confidence            6777766 67889999999 89999999865  4444      44556666788888888887     89999998  89


Q ss_pred             EEeecCcceeecccccc------ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------
Q 042690          137 ETSDLGLAKLLMINQTQ------TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------  203 (266)
Q Consensus       137 ~l~Dfg~a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------  203 (266)
                      +|+|||++.........      ......+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.....       
T Consensus       201 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  280 (352)
T 2jii_A          201 TLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMK  280 (352)
T ss_dssp             EECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHH
T ss_pred             EEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHH
Confidence            99999999875432211      11335789999999999988899999999999999999999999976320       


Q ss_pred             -------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          204 -------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       204 -------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                                         ......+.+++.+||+.||.+||+++++++.|+.+.+...
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          281 QKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             HHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence                               1235778899999999999999999999999999976543


No 168
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=3.9e-37  Score=274.62  Aligned_cols=211  Identities=18%  Similarity=0.176  Sum_probs=176.2

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      +|.+.+.||+|+||.||+|.+. .++..||+|++.                 .+++.++||||+++++++.+.+..++||
T Consensus        27 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           27 RYKGQRVLGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEeeEEecCCCEEEEEEEEC-CCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            6999999999999999999976 678899999752                 3778899999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceee---cCCCEEEEeecCcceeecccccc
Q 042690           88 KFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILL---HDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili---~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      ||+.+++|.+++.....++      +..++..++.++|.++++|+     ||++   +.++.++|+|||++......  .
T Consensus       106 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~  183 (484)
T 3nyv_A          106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS--K  183 (484)
T ss_dssp             CCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC--C
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc--c
Confidence            9999999999998766654      45666677788888888887     8999   56789999999999865422  2


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------ccccchHHHHH
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------PKTLEKPVMIA  214 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------~~~~~~~~~l~  214 (266)
                      ......||+.|+|||++.+ .++.++||||||+++|+|++|..||.....                   ...+..+.+++
T Consensus       184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li  262 (484)
T 3nyv_A          184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI  262 (484)
T ss_dssp             SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHH
T ss_pred             ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHH
Confidence            2334568999999998876 689999999999999999999999976211                   23456788999


Q ss_pred             HHhhhcCCCCCCCHHHHHH--HHHHHH
Q 042690          215 IQFVKEKPPLRPSLRIVAL--MLQSIL  239 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~--~l~~~~  239 (266)
                      .+||+.||.+|||++++++  .++...
T Consensus       263 ~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          263 RKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             HHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             HHHCCCChhHCcCHHHHhhChhhcccc
Confidence            9999999999999999985  355443


No 169
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.7e-36  Score=257.35  Aligned_cols=217  Identities=21%  Similarity=0.270  Sum_probs=175.1

Q ss_pred             CceeeeeccCCCcceEEEEEEEc---CCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCC--eEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLA---PGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQE--CRL   84 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~---~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~--~~~   84 (266)
                      .+|.+.+.||+|+||.||++.+.   ..++..||+|++.              ++++.++||||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            47999999999999999999852   3578899999864              3778889999999999986544  688


Q ss_pred             EEEEcCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           85 LVYKFMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      +||||+++++|.+++.... .++      +..++..++..+|..+++|+     ||+++.++.++|+|||++........
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~  200 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE  200 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCS
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcccccc
Confidence            9999999999999998653 233      34556666778887777776     89999999999999999987643322


Q ss_pred             c--ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC-----------------------------
Q 042690          153 Q--TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG-----------------------------  201 (266)
Q Consensus       153 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~-----------------------------  201 (266)
                      .  ......++..|+|||.+.+..++.++||||||+++|+|+||..|+...                             
T Consensus       201 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (326)
T 2w1i_A          201 YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG  280 (326)
T ss_dssp             EEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC
T ss_pred             ccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCC
Confidence            1  122345677899999998888899999999999999999998876421                             


Q ss_pred             ---CCccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          202 ---SDPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       202 ---~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                         .+...+..+.+++.+||+.||.+||++.++++.|+.+.+
T Consensus       281 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          281 RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence               123345678899999999999999999999999998864


No 170
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=4e-36  Score=249.10  Aligned_cols=205  Identities=14%  Similarity=0.133  Sum_probs=171.6

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEcC
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKFM   90 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   90 (266)
                      .|.+.+.||+|+||.||+|.+. .++..+++|++.              ++++.++||||+++++++.+.+..++||||+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A           10 YYTLENTIGRGSWGEVKIAVQK-GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hEEeeeEEeecCCEEEEEEEeC-CCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            6899999999999999999976 667788888753              4788899999999999999999999999999


Q ss_pred             CCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceee---cCCCEEEEeecCcceeeccccccccc
Q 042690           91 HNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILL---HDYFTVETSDLGLAKLLMINQTQTLT  156 (266)
Q Consensus        91 ~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili---~~~~~~~l~Dfg~a~~~~~~~~~~~~  156 (266)
                      ++++|.+++.....++      +..++..++.++|..+++|+     ||++   +.++.++|+|||++.....  .....
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~--~~~~~  166 (277)
T 3f3z_A           89 TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP--GKMMR  166 (277)
T ss_dssp             CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT--TSCBC
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC--ccchh
Confidence            9999999998766544      44556666688887777776     8999   7889999999999987542  22334


Q ss_pred             cccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC---------------Cc----cccchHHHHHHHh
Q 042690          157 GMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------DP----KTLEKPVMIAIQF  217 (266)
Q Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------~~----~~~~~~~~l~~~c  217 (266)
                      ...+|+.|+|||.+.+. ++.++||||||+++|+|++|+.||....               +.    .....+.+++.+|
T Consensus       167 ~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  245 (277)
T 3f3z_A          167 TKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRL  245 (277)
T ss_dssp             CCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHH
T ss_pred             ccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHH
Confidence            45689999999988764 8999999999999999999999997522               11    3456788999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q 042690          218 VKEKPPLRPSLRIVAL  233 (266)
Q Consensus       218 l~~~p~~Rps~~~il~  233 (266)
                      |+.||.+||++.++++
T Consensus       246 l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          246 LTKSPKQRITSLQALE  261 (277)
T ss_dssp             TCSSTTTSCCHHHHTT
T ss_pred             ccCChhhCcCHHHHhc
Confidence            9999999999999985


No 171
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.7e-36  Score=257.88  Aligned_cols=207  Identities=17%  Similarity=0.201  Sum_probs=163.8

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCC--CceeeeeeEEEeCCeEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHH--KNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h--~~iv~~~~~~~~~~~~~l   85 (266)
                      ..|.+.+.||+|+||.||++...  +++.||+|++.                .+++.++|  |||+++++++.+++..++
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECT--TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeC--CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            47999999999999999999974  68889999753                36677776  999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc-
Q 042690           86 VYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ-  153 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~-  153 (266)
                      ||| +.+++|.+++.....+.      +..++..++.++|..+++|+     ||+++ ++.++|+|||++......... 
T Consensus        87 v~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~  164 (343)
T 3dbq_A           87 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV  164 (343)
T ss_dssp             EEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred             EEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence            999 45779999998766654      44566677788888888887     89997 678999999999876433222 


Q ss_pred             ccccccCCCCcCCccccCC-----------CCCCcccchhhHHHHHHHHHhCCCcccCC------------------CCc
Q 042690          154 TLTGMRETKGYLPPEWFRN-----------MPVTVKVDVYSFGVMLLEIISCRCVERQG------------------SDP  204 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Di~slG~i~~~l~tg~~p~~~~------------------~~~  204 (266)
                      ......||+.|+|||++.+           ..++.++||||||+++|+|++|+.||...                  .+.
T Consensus       165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  244 (343)
T 3dbq_A          165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD  244 (343)
T ss_dssp             -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCC
T ss_pred             cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcc
Confidence            2234678999999998754           56889999999999999999999999751                  122


Q ss_pred             cccchHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          205 KTLEKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       205 ~~~~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                      .....+.+++.+||+.||.+||++.++++.
T Consensus       245 ~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          245 IPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            233568899999999999999999999853


No 172
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=1.6e-36  Score=253.02  Aligned_cols=219  Identities=19%  Similarity=0.204  Sum_probs=168.3

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCC--cceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGD--KTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~--~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      ..+|.+.+.||+|+||.||+|.+...+  ...||+|.+.                 .+++.++||||+++++++..+. .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            458999999999999999999975333  3468998764                 2677889999999999987665 7


Q ss_pred             EEEEEcCCCCCHHHHHhhcC-CC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           84 LLVYKFMHNRSISSLLYECL-RP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~-~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      ++||||+.+++|.+++.... .+      .+..++..++.++|.++++|+     ||+++.++.++|+|||++.......
T Consensus        96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  175 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND  175 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred             eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccc
Confidence            89999999999999997542 23      344566667788888877776     8999999999999999998764322


Q ss_pred             cc--ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC-----------------CCccccchHH
Q 042690          152 TQ--TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG-----------------SDPKTLEKPV  211 (266)
Q Consensus       152 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~-----------------~~~~~~~~~~  211 (266)
                      ..  ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...                 .+......+.
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  255 (291)
T 1u46_A          176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY  255 (291)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHH
T ss_pred             cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHH
Confidence            21  2223456778999999988888999999999999999999 99998651                 1234556788


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          212 MIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       212 ~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                      +++.+||+.||.+||++.++++.|+......
T Consensus       256 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  286 (291)
T 1u46_A          256 NVMVQCWAHKPEDRPTFVALRDFLLEAQPTD  286 (291)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence            9999999999999999999999999886543


No 173
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=6.9e-37  Score=259.78  Aligned_cols=221  Identities=20%  Similarity=0.239  Sum_probs=174.7

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEc----CCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCe
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLA----PGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQEC   82 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~   82 (266)
                      ..++|.+.+.||+|+||.||+|.+.    ..++..||+|.+.               .+++.++||||+++++++.....
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            3468999999999999999999852    2467789999863               36778899999999999999889


Q ss_pred             EEEEEEcCCCCCHHHHHhhcCC-------CC------HHHHHHHHHHHhhhcCcccc-----ceeecC---CCEEEEeec
Q 042690           83 RLLVYKFMHNRSISSLLYECLR-------PT------WQQRMQDCIRDCWRTRALAC-----RILLHD---YFTVETSDL  141 (266)
Q Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~-------~~------~~~~l~~~~~~~~~~~~~h~-----nili~~---~~~~~l~Df  141 (266)
                      .++||||+++++|.+++.....       +.      +..++..++.++|..+++|+     ||+++.   +..++|+||
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Df  187 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF  187 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcc
Confidence            9999999999999999986532       32      44566667788888888877     899984   446999999


Q ss_pred             Ccceeeccccc-cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CC
Q 042690          142 GLAKLLMINQT-QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SD  203 (266)
Q Consensus       142 g~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~  203 (266)
                      |++........ .......+++.|+|||.+.+..++.++||||||+++|+|+| |..||...                .+
T Consensus       188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~  267 (327)
T 2yfx_A          188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP  267 (327)
T ss_dssp             HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC
T ss_pred             ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCC
Confidence            99975432221 12233557889999999888889999999999999999998 88888652                22


Q ss_pred             ccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          204 PKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       204 ~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                      ......+.+++.+||+.||.+||++.++++.|+.+...+
T Consensus       268 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~  306 (327)
T 2yfx_A          268 KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  306 (327)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence            345567889999999999999999999999999987654


No 174
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=4.1e-36  Score=250.35  Aligned_cols=206  Identities=18%  Similarity=0.216  Sum_probs=165.6

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      +.|.+.+.||+|+||.||++..+ .++..+++|.+.               ++++.++||||+++++++.+....++|||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEER-SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hheeecceeccCCCeEEEEEEEc-cCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            37999999999999999999976 678888998754               37888999999999999999999999999


Q ss_pred             cCCCCCHHHHHhhc----CCCC------HHHHHHHHHHHhhhcCcccc-----ceee---cCCCEEEEeecCcceeeccc
Q 042690           89 FMHNRSISSLLYEC----LRPT------WQQRMQDCIRDCWRTRALAC-----RILL---HDYFTVETSDLGLAKLLMIN  150 (266)
Q Consensus        89 ~~~~~~L~~~l~~~----~~~~------~~~~l~~~~~~~~~~~~~h~-----nili---~~~~~~~l~Dfg~a~~~~~~  150 (266)
                      |+++++|.+++...    ..++      +..++..++.++|..+++|+     ||++   +.++.++|+|||++......
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~  180 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD  180 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence            99999999998643    3333      44566677788888888877     8999   45678999999999865422


Q ss_pred             cccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------CccccchHHH
Q 042690          151 QTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLEKPVM  212 (266)
Q Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~~~~~  212 (266)
                        .......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||....                  .......+.+
T Consensus       181 --~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (285)
T 3is5_A          181 --EHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVD  257 (285)
T ss_dssp             --------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHH
T ss_pred             --ccCcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHH
Confidence              22334568999999998764 68899999999999999999999997521                  1124567889


Q ss_pred             HHHHhhhcCCCCCCCHHHHHH
Q 042690          213 IAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       213 l~~~cl~~~p~~Rps~~~il~  233 (266)
                      ++.+||+.||.+||+++++++
T Consensus       258 li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          258 LLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999985


No 175
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=3.4e-36  Score=269.21  Aligned_cols=205  Identities=16%  Similarity=0.189  Sum_probs=169.2

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      .|.+.+.||+|+||.||+|.++ .++..+|+|.+.                .+++.++||||+++++++.+.+..++|||
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDK-VTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEET-TTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEeeEEecCCCEEEEEEEEC-CCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            6999999999999999999986 678889998753                37888999999999999999999999999


Q ss_pred             cCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCC---CEEEEeecCcceeeccccccc
Q 042690           89 FMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDY---FTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~---~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      |+.+++|.+++.....++      +..++..++.++|..+++|+     ||+++..   +.+||+|||++......  ..
T Consensus       117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~--~~  194 (494)
T 3lij_A          117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ--KK  194 (494)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT--BC
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC--cc
Confidence            999999999988765544      45666677788888888877     8999764   55999999999876432  23


Q ss_pred             cccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------ccccchHHHHHH
Q 042690          155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------PKTLEKPVMIAI  215 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------~~~~~~~~~l~~  215 (266)
                      .....||+.|+|||++.+ .++.++||||+||++|+|++|..||.....                   ...+..+.+++.
T Consensus       195 ~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  273 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK  273 (494)
T ss_dssp             BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHH
T ss_pred             ccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHH
Confidence            345678999999998864 689999999999999999999999976221                   124567889999


Q ss_pred             HhhhcCCCCCCCHHHHHH
Q 042690          216 QFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       216 ~cl~~~p~~Rps~~~il~  233 (266)
                      +||+.||.+|||+.++++
T Consensus       274 ~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          274 QMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHTCSSTTTSCCHHHHHT
T ss_pred             HHCCCChhhCccHHHHhc
Confidence            999999999999999884


No 176
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=3.4e-36  Score=254.13  Aligned_cols=208  Identities=17%  Similarity=0.127  Sum_probs=163.4

Q ss_pred             ceeee-eccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhh-cCCCceeeeeeEEEeCCeEEEEEE
Q 042690           25 HIYSL-KKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHV-AHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        25 ~~~~~-~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~-~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      .|.+. +.||+|+||.||+|.+. .++..||+|++.              .+++. .+||||+++++++.+++..++|||
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINL-ITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECS-SSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eEEecCceecCCceEEEEEEEEc-CCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            46664 78999999999999975 678899999863              24555 579999999999999999999999


Q ss_pred             cCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCE---EEEeecCcceeecccc---
Q 042690           89 FMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFT---VETSDLGLAKLLMINQ---  151 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~---~~l~Dfg~a~~~~~~~---  151 (266)
                      |+++++|.+++.....+.      +..++..++.++|..+++|+     ||+++.++.   ++|+|||++.......   
T Consensus        92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~  171 (316)
T 2ac3_A           92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS  171 (316)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred             cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence            999999999998765544      44556667788888888877     899998776   9999999987653211   


Q ss_pred             ---ccccccccCCCCcCCccccCC-----CCCCcccchhhHHHHHHHHHhCCCcccCCCC--------------------
Q 042690          152 ---TQTLTGMRETKGYLPPEWFRN-----MPVTVKVDVYSFGVMLLEIISCRCVERQGSD--------------------  203 (266)
Q Consensus       152 ---~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~--------------------  203 (266)
                         ........||+.|+|||++.+     ..++.++|||||||++|+|++|+.||.....                    
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  251 (316)
T 2ac3_A          172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE  251 (316)
T ss_dssp             ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH
T ss_pred             cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH
Confidence               111223458999999998864     4578899999999999999999999965321                    


Q ss_pred             --------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 --------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 --------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                    ......+.+++.+||+.||.+||+++++++
T Consensus       252 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          252 SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence                          123456789999999999999999999986


No 177
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=4e-38  Score=264.06  Aligned_cols=216  Identities=17%  Similarity=0.171  Sum_probs=157.8

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------HHhhh--cCCCceeeeeeEEEeCC----eEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------KVVHV--AHHKNLVCLLGYHIEQE----CRLLV   86 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------~~l~~--~~h~~iv~~~~~~~~~~----~~~lv   86 (266)
                      ++|.+.+.||+|+||.||+|.+   .+..||+|++.           +++..  ++||||+++++++....    ..++|
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv   79 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-C---TTSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred             ceeeehhhccCCCCeEEEEEEE---cCcceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence            4788999999999999999986   57889999865           24444  78999999999998766    78999


Q ss_pred             EEcCCCCCHHHHHhhcCC-----CCHHHHHHHHHHHhh--------hcCcccc-----ceeecCCCEEEEeecCcceeec
Q 042690           87 YKFMHNRSISSLLYECLR-----PTWQQRMQDCIRDCW--------RTRALAC-----RILLHDYFTVETSDLGLAKLLM  148 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~-----~~~~~~l~~~~~~~~--------~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~  148 (266)
                      |||+++|+|.+++....-     ..+..++..++.++|        ..+++|+     ||+++.++.++|+|||++....
T Consensus        80 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~  159 (303)
T 3gxj_A           80 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             EECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEE
T ss_pred             EeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceecc
Confidence            999999999999975321     234456667778888        6666665     9999999999999999997654


Q ss_pred             ccccc---ccccccCCCCcCCccccCCC------CCCcccchhhHHHHHHHHHhC----------CCcccCCC-------
Q 042690          149 INQTQ---TLTGMRETKGYLPPEWFRNM------PVTVKVDVYSFGVMLLEIISC----------RCVERQGS-------  202 (266)
Q Consensus       149 ~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~i~~~l~tg----------~~p~~~~~-------  202 (266)
                      .....   ......||+.|+|||++.+.      .++.++||||||+++|+|+||          +.||....       
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~  239 (303)
T 3gxj_A          160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE  239 (303)
T ss_dssp             TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC
T ss_pred             CCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHH
Confidence            32222   12234689999999998765      344689999999999999999          66664311       


Q ss_pred             -----------Cc---------cccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          203 -----------DP---------KTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       203 -----------~~---------~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                                 .+         .....+.+++.+||+.||.+|||++++++.|+.+.+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~  299 (303)
T 3gxj_A          240 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             -CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred             HHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence                       01         11225788999999999999999999999999887644


No 178
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=4e-36  Score=249.78  Aligned_cols=215  Identities=16%  Similarity=0.214  Sum_probs=174.4

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------------HHhhhcCCCceeeeeeEEEeCCeEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------------KVVHVAHHKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------------~~l~~~~h~~iv~~~~~~~~~~~~~   84 (266)
                      +|.+.+.||+|+||.||++.+. .+++.+|+|.+.                    .+++.++||||+++++++.+....+
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            6 HYEMGEELGSGQFAIVRKCRQK-GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhHHhhcccCceEEEEEEEc-CCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            6899999999999999999986 578889998642                    3678899999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCC----EEEEeecCcceeecc
Q 042690           85 LVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYF----TVETSDLGLAKLLMI  149 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~----~~~l~Dfg~a~~~~~  149 (266)
                      +||||+++++|.+++.....++      +..++..++.++|..+++|+     ||+++.++    .++|+|||++.....
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~  164 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA  164 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred             EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence            9999999999999998665544      44556666688887777776     89998877    899999999987542


Q ss_pred             ccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------ccccchH
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------PKTLEKP  210 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------~~~~~~~  210 (266)
                      .  .......+++.|+|||.+.+..++.++|+||||+++|+|++|..||.....                   ......+
T Consensus       165 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (283)
T 3bhy_A          165 G--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA  242 (283)
T ss_dssp             ---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHH
T ss_pred             C--CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHH
Confidence            2  222345689999999999988899999999999999999999999865221                   2234567


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH--HHHHHHhCC
Q 042690          211 VMIAIQFVKEKPPLRPSLRIVAL--MLQSILEVP  242 (266)
Q Consensus       211 ~~l~~~cl~~~p~~Rps~~~il~--~l~~~~~~~  242 (266)
                      .+++.+||+.||.+||++.++++  .++......
T Consensus       243 ~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~  276 (283)
T 3bhy_A          243 KDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN  276 (283)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred             HHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence            88999999999999999999986  466655443


No 179
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=3.5e-36  Score=257.85  Aligned_cols=212  Identities=18%  Similarity=0.253  Sum_probs=169.6

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEe-----
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIE-----   79 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~-----   79 (266)
                      +..++|.+.+.||+|+||.||+|.+. .+++.||+|++.                .+++.++||||+++++++..     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   92 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFGEVFKARHR-KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPY   92 (351)
T ss_dssp             CBGGGEEEEEECSSCSTTSEEEEEET-TTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC----
T ss_pred             ccccceeEEEEEecCCCcEEEEEEEC-CCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccc
Confidence            45779999999999999999999986 678899999653                47889999999999999877     


Q ss_pred             ---CCeEEEEEEcCCCCCHHHHHhhc-CCC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcc
Q 042690           80 ---QECRLLVYKFMHNRSISSLLYEC-LRP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLA  144 (266)
Q Consensus        80 ---~~~~~lv~e~~~~~~L~~~l~~~-~~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a  144 (266)
                         .+..++||||+.+ +|.+.+... ..+      .+..++..++.++|..+++|+     ||+++.++.++|+|||++
T Consensus        93 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           93 NRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA  171 (351)
T ss_dssp             ----CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             ccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence               3468999999986 777777643 333      344566677788888887776     999999999999999999


Q ss_pred             eeeccc---cccccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCC---------------cc
Q 042690          145 KLLMIN---QTQTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSD---------------PK  205 (266)
Q Consensus       145 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~---------------~~  205 (266)
                      ......   .........+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||.....               +.
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  251 (351)
T 3mi9_A          172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE  251 (351)
T ss_dssp             EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence            875422   1222344678999999998876 4579999999999999999999999875221               00


Q ss_pred             --------------------------------ccchHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          206 --------------------------------TLEKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       206 --------------------------------~~~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                                                      ....+.+++.+||+.||.+||+++++++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence                                            13347789999999999999999998863


No 180
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=6.4e-36  Score=250.42  Aligned_cols=208  Identities=20%  Similarity=0.303  Sum_probs=170.9

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      +++|.+.+.||+|+||.||+|.+. .+++.||+|++.                .+++.++||||+++++++..++..++|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNK-LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   80 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEc-CCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence            578999999999999999999986 578899999764                367788999999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhcC--CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           87 YKFMHNRSISSLLYECL--RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~--~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      |||+. ++|.+++....  .+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++...... ..
T Consensus        81 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~~  158 (299)
T 2r3i_A           81 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VR  158 (299)
T ss_dssp             EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC-SB
T ss_pred             EEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCC-cc
Confidence            99998 59999997653  232      44566677788888888877     899999999999999999765321 22


Q ss_pred             ccccccCCCCcCCccccCCCC-CCcccchhhHHHHHHHHHhCCCcccCCCC-----------------------------
Q 042690          154 TLTGMRETKGYLPPEWFRNMP-VTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------------------  203 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------------------  203 (266)
                      ......++..|+|||.+.+.. ++.++||||||+++|+|+||+.||.....                             
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (299)
T 2r3i_A          159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK  238 (299)
T ss_dssp             CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccc
Confidence            233456799999999887655 78999999999999999999999865221                             


Q ss_pred             ---------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ---------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ---------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                     +.....+.+++.+||+.||.+||+++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~  283 (299)
T 2r3i_A          239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  283 (299)
T ss_dssp             TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                           113456788999999999999999999986


No 181
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=6.5e-36  Score=249.51  Aligned_cols=205  Identities=20%  Similarity=0.282  Sum_probs=167.1

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEe----CCeE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIE----QECR   83 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~----~~~~   83 (266)
                      ..|.+.+.||+|+||.||+|.+. .++..|++|.+.                .+++.++||||+++++++..    ....
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  104 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEec-CCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence            35888899999999999999976 678888888753                36778899999999999875    3458


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcC--cccc-----ceeec-CCCEEEEeecCcceeecc
Q 042690           84 LLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTR--ALAC-----RILLH-DYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~--~~h~-----nili~-~~~~~~l~Dfg~a~~~~~  149 (266)
                      ++||||+++++|.+++.....+.      +..++..++.++|..+  ++|+     ||+++ .++.++|+|||++.....
T Consensus       105 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~  184 (290)
T 1t4h_A          105 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence            99999999999999998765544      4456666778888777  7776     89997 789999999999975432


Q ss_pred             ccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------CccccchHH
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLEKPV  211 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~~~~  211 (266)
                         .......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||....                  +......+.
T Consensus       185 ---~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  260 (290)
T 1t4h_A          185 ---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK  260 (290)
T ss_dssp             ---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHH
T ss_pred             ---cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHH
Confidence               22234568999999998875 58899999999999999999999997511                  112335688


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHH
Q 042690          212 MIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       212 ~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      +++.+||+.||.+||+++++++
T Consensus       261 ~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          261 EIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHccCChhhCCCHHHHhh
Confidence            9999999999999999999885


No 182
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.4e-36  Score=258.50  Aligned_cols=209  Identities=20%  Similarity=0.212  Sum_probs=168.8

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------------HHhhhcCCCceeeeeeEEEeCCeE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------------KVVHVAHHKNLVCLLGYHIEQECR   83 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------------~~l~~~~h~~iv~~~~~~~~~~~~   83 (266)
                      .++|.+.+.||+|+||.||+|.+. .+++.||+|++.                   ++++.++||||+++++++...+..
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDK-NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECS-SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             hcccEEEeEEeecCCEEEEEEEEC-CCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            468999999999999999999975 568899999764                   367788999999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcCC-------CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           84 LLVYKFMHNRSISSLLYECLR-------PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~-------~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      ++||||+++ +|.+++.....       ..+..++..++.++|..+++|+     ||+++.++.++|+|||++..... .
T Consensus        88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~-~  165 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS-P  165 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS-C
T ss_pred             EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccC-C
Confidence            999999986 89998875432       2355667777788888888887     89999999999999999986542 2


Q ss_pred             ccccccccCCCCcCCccccCCC-CCCcccchhhHHHHHHHHHhCCCcccCCCC---------------------------
Q 042690          152 TQTLTGMRETKGYLPPEWFRNM-PVTVKVDVYSFGVMLLEIISCRCVERQGSD---------------------------  203 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~i~~~l~tg~~p~~~~~~---------------------------  203 (266)
                      ........+|+.|+|||++.+. .++.++||||||+++|+|++|.+||.....                           
T Consensus       166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  245 (346)
T 1ua2_A          166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD  245 (346)
T ss_dssp             CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred             cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence            2233446789999999988654 478999999999999999999988865210                           


Q ss_pred             ----------------ccccchHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          204 ----------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       204 ----------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                                      ......+.+++.+||+.||.+|||++++++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence                            1223567889999999999999999999864


No 183
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=2.3e-36  Score=267.96  Aligned_cols=209  Identities=18%  Similarity=0.203  Sum_probs=156.3

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeC-----Ce
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQ-----EC   82 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~-----~~   82 (266)
                      ++|.+.+.||+|+||+||+|.+. .++..||+|++.                .+++.++||||+++++++...     ..
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDK-LEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             TTEEECCC-------CEEEEEEC-C--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCeEEeeEeeecCCeEEEEEEEC-CCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            57999999999999999999976 678899999653                378889999999999998543     46


Q ss_pred             EEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           83 RLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      .|+||||+. ++|.+++.....+.      +..++..++.++|..+++|+     |||++.++.+||+|||+++......
T Consensus       132 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  210 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE  210 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCT
T ss_pred             EEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCcc
Confidence            899999985 59999998766544      45667777788998888887     9999999999999999998753211


Q ss_pred             c--------------------------cccccccCCCCcCCcccc-CCCCCCcccchhhHHHHHHHHHh-----------
Q 042690          152 T--------------------------QTLTGMRETKGYLPPEWF-RNMPVTVKVDVYSFGVMLLEIIS-----------  193 (266)
Q Consensus       152 ~--------------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~i~~~l~t-----------  193 (266)
                      .                          .......||+.|+|||++ .+..++.++|||||||++|||+|           
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~  290 (458)
T 3rp9_A          211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHAD  290 (458)
T ss_dssp             TCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGG
T ss_pred             ccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccccc
Confidence            1                          122345789999999975 46679999999999999999999           


Q ss_pred             CCCcccCCC------------------------------------------------------------------Ccccc
Q 042690          194 CRCVERQGS------------------------------------------------------------------DPKTL  207 (266)
Q Consensus       194 g~~p~~~~~------------------------------------------------------------------~~~~~  207 (266)
                      |+++|++..                                                                  .+...
T Consensus       291 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  370 (458)
T 3rp9_A          291 RGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASS  370 (458)
T ss_dssp             CCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSC
T ss_pred             ccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCC
Confidence            555554321                                                                  01225


Q ss_pred             chHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          208 EKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       208 ~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                      ..+.+++.+||..||.+|||++|+++.
T Consensus       371 ~~~~dLl~~mL~~dP~~R~t~~e~L~H  397 (458)
T 3rp9_A          371 ADAIHLLKRMLVFNPNKRITINECLAH  397 (458)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcC
Confidence            667899999999999999999999863


No 184
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=2.5e-36  Score=253.89  Aligned_cols=210  Identities=32%  Similarity=0.436  Sum_probs=169.1

Q ss_pred             eeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------------HHhhhcCCCceeeeeeEEEeCCeEEEEEE
Q 042690           27 YSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------------KVVHVAHHKNLVCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        27 ~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   88 (266)
                      ...+.||+|+||.||+|.+   ++..+|+|++.                  .+++.++||||+++++++.+.+..++|||
T Consensus        34 ~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  110 (307)
T 2nru_A           34 VGGNKMGEGGFGVVYKGYV---NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV  110 (307)
T ss_dssp             TTCCEEEECSSEEEEEEES---SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             ccCCccccCCCeEEEEEEE---CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEE
Confidence            3448899999999999996   57788888653                  37788999999999999999999999999


Q ss_pred             cCCCCCHHHHHhhc---CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc-
Q 042690           89 FMHNRSISSLLYEC---LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ-  153 (266)
Q Consensus        89 ~~~~~~L~~~l~~~---~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~-  153 (266)
                      |+++++|.+++...   ..++      +..++..++.++|..+++|+     ||+++.++.++|+|||++......... 
T Consensus       111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  190 (307)
T 2nru_A          111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV  190 (307)
T ss_dssp             CCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred             ecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence            99999999999742   2244      34455666678887777776     899999999999999999875432222 


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCCc-----------------------------
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDP-----------------------------  204 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~-----------------------------  204 (266)
                      ......|++.|+|||.+.+ .++.++||||||+++|+|++|..||......                             
T Consensus       191 ~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (307)
T 2nru_A          191 MTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD  269 (307)
T ss_dssp             ECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCC
T ss_pred             cccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccc
Confidence            2234568999999998865 4788999999999999999999998753221                             


Q ss_pred             -cccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          205 -KTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       205 -~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                       .....+.+++.+||+.||.+||+++++++.|+.+..
T Consensus       270 ~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             HHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             hHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence             122456789999999999999999999999998753


No 185
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=6e-36  Score=254.04  Aligned_cols=210  Identities=16%  Similarity=0.216  Sum_probs=172.5

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------HHhhhcC-CCceeeeeeEEEe--CCeEEEE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------KVVHVAH-HKNLVCLLGYHIE--QECRLLV   86 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------~~l~~~~-h~~iv~~~~~~~~--~~~~~lv   86 (266)
                      ++.++|.+.+.||+|+||.||+|.+. .++..||+|.+.           .+++.++ ||||+++++++.+  ....++|
T Consensus        33 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           33 GNQDDYQLVRKLGRGKYSEVFEAINI-TNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             EEGGGEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             cCCCceEEEEEecccCCeEEEEEEEC-CCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            44578999999999999999999976 678899999864           3777886 9999999999987  5678999


Q ss_pred             EEcCCCCCHHHHHhhcCC---CCHHHHHHHHHHHhhhcCcccc-----ceeecCCC-EEEEeecCcceeecccccccccc
Q 042690           87 YKFMHNRSISSLLYECLR---PTWQQRMQDCIRDCWRTRALAC-----RILLHDYF-TVETSDLGLAKLLMINQTQTLTG  157 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~---~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~-~~~l~Dfg~a~~~~~~~~~~~~~  157 (266)
                      |||+.+++|.+++.....   ..+..++..++.++|..+++|+     ||+++.++ .++|+|||++......  .....
T Consensus       112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~--~~~~~  189 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNV  189 (330)
T ss_dssp             EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT--CCCCS
T ss_pred             EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC--Ccccc
Confidence            999999999999864221   3455677777888888888877     89999776 9999999999875422  22344


Q ss_pred             ccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCC---------------------------------
Q 042690          158 MRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSD---------------------------------  203 (266)
Q Consensus       158 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~---------------------------------  203 (266)
                      ..++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.....                                 
T Consensus       190 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (330)
T 3nsz_A          190 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFN  269 (330)
T ss_dssp             CCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHH
T ss_pred             ccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchh
Confidence            568999999998876 6689999999999999999999999843211                                 


Q ss_pred             --------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 --------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 --------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                          ......+.+++.+||+.||.+|||++++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          270 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                                114567889999999999999999999986


No 186
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.5e-36  Score=264.46  Aligned_cols=215  Identities=15%  Similarity=0.146  Sum_probs=175.5

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCC--eEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQE--CRLLV   86 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~--~~~lv   86 (266)
                      ..|.+.+.||+|+||.||+|.+. .++..||+|++.               ++++.++||||+++++++...+  ..++|
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEEC-CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            47999999999999999999986 668899999754               3788899999999999998755  67999


Q ss_pred             EEcCCCCCHHHHHhhcCC---CC------HHHHHHHHHHHhhhcCcccc-----ceee----cCCCEEEEeecCcceeec
Q 042690           87 YKFMHNRSISSLLYECLR---PT------WQQRMQDCIRDCWRTRALAC-----RILL----HDYFTVETSDLGLAKLLM  148 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~---~~------~~~~l~~~~~~~~~~~~~h~-----nili----~~~~~~~l~Dfg~a~~~~  148 (266)
                      |||+++++|.+++.....   +.      +..++..++.++|..+++|+     ||++    +.++.+||+|||+++...
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~  167 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence            999999999999975432   33      44566667788888777776     8998    788889999999998764


Q ss_pred             cccccccccccCCCCcCCccccCC--------CCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------
Q 042690          149 INQTQTLTGMRETKGYLPPEWFRN--------MPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------  203 (266)
Q Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------  203 (266)
                      .  ........||..|+|||++.+        ..++.++|||||||++|+|++|+.||.....                 
T Consensus       168 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~  245 (396)
T 4eut_A          168 D--DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS  245 (396)
T ss_dssp             C--GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCT
T ss_pred             C--CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCc
Confidence            3  223334668999999998764        4577899999999999999999999864111                 


Q ss_pred             ---------------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhC
Q 042690          204 ---------------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEV  241 (266)
Q Consensus       204 ---------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~  241 (266)
                                                 ......+.+++.+||+.||.+||+++++++.++.+...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence                                       11233566899999999999999999999999998764


No 187
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=3e-36  Score=254.67  Aligned_cols=228  Identities=15%  Similarity=0.175  Sum_probs=174.2

Q ss_pred             CchhhhhhHhcccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeee
Q 042690           11 DPSQYENRVFGSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLL   74 (266)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~   74 (266)
                      .+..+...+.-..++|.+.+.||+|+||.||+|.+.  .  .+++|.+.                .+++.++||||++++
T Consensus        20 ~~~~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~--~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~   95 (319)
T 2y4i_B           20 QTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWH--G--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM   95 (319)
T ss_dssp             --CCCGGGSSSCCSCEECCCBCCCSSSSEEEEEEES--S--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCC
T ss_pred             ccccccccccCCHHHeEEeeEeccCCceEEEEEEEc--C--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEE
Confidence            333444445556789999999999999999999974  1  36666654                478888999999999


Q ss_pred             eEEEeCCeEEEEEEcCCCCCHHHHHhhcC-CC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecC
Q 042690           75 GYHIEQECRLLVYKFMHNRSISSLLYECL-RP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLG  142 (266)
Q Consensus        75 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg  142 (266)
                      +++.+....++||||+++++|.+++.... .+      .+..++..++.++|.++++|+     ||+++ ++.++|+|||
T Consensus        96 ~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg  174 (319)
T 2y4i_B           96 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFG  174 (319)
T ss_dssp             EEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCS
T ss_pred             EEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecC
Confidence            99999999999999999999999998654 23      345666677788888888877     89998 6799999999


Q ss_pred             cceeeccc----cccccccccCCCCcCCccccCC---------CCCCcccchhhHHHHHHHHHhCCCcccCCC-------
Q 042690          143 LAKLLMIN----QTQTLTGMRETKGYLPPEWFRN---------MPVTVKVDVYSFGVMLLEIISCRCVERQGS-------  202 (266)
Q Consensus       143 ~a~~~~~~----~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-------  202 (266)
                      ++......    .........++..|+|||.+.+         ..++.++||||||+++|+|++|+.||....       
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  254 (319)
T 2y4i_B          175 LFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ  254 (319)
T ss_dssp             CCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH
T ss_pred             CccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            98764311    1112233458899999998764         357889999999999999999999987521       


Q ss_pred             ----------CccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          203 ----------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       203 ----------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                                .......+.+++.+||+.||.+||++.++++.|+.+.+...
T Consensus       255 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~  305 (319)
T 2y4i_B          255 MGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR  305 (319)
T ss_dssp             HHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred             hccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence                      12345688999999999999999999999999999877654


No 188
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=2.6e-37  Score=267.46  Aligned_cols=204  Identities=9%  Similarity=0.002  Sum_probs=164.0

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------------HHhhhcCCCceeeee-------e
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------------KVVHVAHHKNLVCLL-------G   75 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------------~~l~~~~h~~iv~~~-------~   75 (266)
                      ..+|.+.+.||+|+||.||+|.+. .++..||+|++.                    +.++.++||||++++       +
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQ-ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC--CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CceEEEcceeecCCCEEEEEEEEC-CCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            357999999999999999999975 578899999863                    134455899999998       6


Q ss_pred             EEEeCCe-----------------EEEEEEcCCCCCHHHHHhhcCC-------------CCHHHHHHHHHHHhhhcCccc
Q 042690           76 YHIEQEC-----------------RLLVYKFMHNRSISSLLYECLR-------------PTWQQRMQDCIRDCWRTRALA  125 (266)
Q Consensus        76 ~~~~~~~-----------------~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~l~~~~~~~~~~~~~h  125 (266)
                      ++.+++.                 .++||||+ +|+|.+++.....             ..+..++..++.++|.++++|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  229 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  229 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            6665532                 78999999 5799999985322             235567777778888888888


Q ss_pred             c-----ceeecCCCEEEEeecCcceeeccccccccccccCCCCcCCccccCCC-----------CCCcccchhhHHHHHH
Q 042690          126 C-----RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNM-----------PVTVKVDVYSFGVMLL  189 (266)
Q Consensus       126 ~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~Di~slG~i~~  189 (266)
                      +     |||++.++.+||+|||+++...    .......| +.|+|||++.+.           .++.++|||||||++|
T Consensus       230 rDikp~NIll~~~~~~kL~DFG~a~~~~----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~  304 (377)
T 3byv_A          230 TYLRPVDIVLDQRGGVFLTGFEHLVRDG----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY  304 (377)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETT----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred             CCCCHHHEEEcCCCCEEEEechhheecC----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence            7     9999999999999999998632    22334556 999999998876           7899999999999999


Q ss_pred             HHHhCCCcccCCC-----------CccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          190 EIISCRCVERQGS-----------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       190 ~l~tg~~p~~~~~-----------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      +|++|+.||....           .......+.+++.+||+.||.+||++.++++
T Consensus       305 elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          305 WIWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            9999999997622           2345567889999999999999999999985


No 189
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=4.2e-36  Score=276.44  Aligned_cols=217  Identities=17%  Similarity=0.179  Sum_probs=174.3

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcC--CCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAP--GDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~--~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      .++|.+.+.||+|+||.||+|.+..  ..+..+|+|...               .+++.++||||+++++++. ++..++
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l  467 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI  467 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence            4579999999999999999999853  235678998753               3777889999999999984 556899


Q ss_pred             EEEcCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           86 VYKFMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      ||||+++|+|.+++.... .++      +..++..++.++|.++++|+     ||+++.++.++|+|||+++........
T Consensus       468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~  547 (656)
T 2j0j_A          468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY  547 (656)
T ss_dssp             EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----
T ss_pred             EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcce
Confidence            999999999999997543 333      44566677788888888887     999999999999999999876433333


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHH
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQ  216 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~  216 (266)
                      ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||...                .++.....+.+++.+
T Consensus       548 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~  627 (656)
T 2j0j_A          548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK  627 (656)
T ss_dssp             ------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred             eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHH
Confidence            3334556789999999988889999999999999999997 88888651                234455788899999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          217 FVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       217 cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      ||+.||.+||++.++++.|+.+.+
T Consensus       628 ~l~~dP~~RPs~~el~~~L~~il~  651 (656)
T 2j0j_A          628 CWAYDPSRRPRFTELKAQLSTILE  651 (656)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HcCCChhHCcCHHHHHHHHHHHHH
Confidence            999999999999999999998864


No 190
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.7e-36  Score=258.75  Aligned_cols=204  Identities=20%  Similarity=0.257  Sum_probs=163.7

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCC-----
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQE-----   81 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~-----   81 (266)
                      ...|.+.+.||+|+||.||+|.+. .++..||+|++.                .+++.++||||+++++++....     
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDG-RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEET-TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cceEEEeEEeeecCCeEEEEEEEC-CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            357999999999999999999975 678899999773                3778899999999999997653     


Q ss_pred             -eEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           82 -CRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        82 -~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                       .+++||||+ +++|.+++.. ..+.      +..++..++.++|..+++|+     ||+++.++.+||+|||+++....
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  180 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS  180 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             ceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence             469999999 7799999975 3333      45667777788888888887     89999999999999999987532


Q ss_pred             ccccccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------------
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------------  203 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------------  203 (266)
                          ......+|+.|+|||++.+ ..++.++||||+||++++|++|+.||.+...                         
T Consensus       181 ----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~  256 (367)
T 1cm8_A          181 ----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD  256 (367)
T ss_dssp             ----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCH
T ss_pred             ----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhH
Confidence                2334568999999998876 6789999999999999999999999975211                         


Q ss_pred             ---------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ---------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ---------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                           +.....+.+++.+||..||.+|||++++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          257 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             HHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence                                 123456788999999999999999999986


No 191
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=8.3e-36  Score=267.32  Aligned_cols=219  Identities=15%  Similarity=0.205  Sum_probs=177.3

Q ss_pred             CchhhhhhHhccc-CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------------------HHh
Q 042690           11 DPSQYENRVFGSF-SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------------------KVV   62 (266)
Q Consensus        11 ~~~~~~~~~~~~~-~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------------------~~l   62 (266)
                      .|..+.....+.+ ..|.+.+.||+|+||+||+|.++ .++..+|+|.+.                           .++
T Consensus        22 ~~~~~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  100 (504)
T 3q5i_A           22 NPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEK-NGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL  100 (504)
T ss_dssp             CGGGGCCEECSCGGGTEEEEEEEEC--CEEEEEEEET-TTCCEEEEEEEEC----------------CTHHHHHHHHHHH
T ss_pred             chhheeeccCCCcccceEEEeEecccCCeEEEEEEEC-CCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHH
Confidence            4444444444443 46999999999999999999986 677889998742                           367


Q ss_pred             hhcCCCceeeeeeEEEeCCeEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeec
Q 042690           63 HVAHHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLH  131 (266)
Q Consensus        63 ~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~  131 (266)
                      +.++||||+++++++.+....++|||||++++|.+++.....++      +..++..++.++|..+++|+     ||+++
T Consensus       101 ~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~  180 (504)
T 3q5i_A          101 KSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLE  180 (504)
T ss_dssp             HTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEES
T ss_pred             HhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEe
Confidence            78899999999999999999999999999999999998766654      44566677788888888877     89999


Q ss_pred             CCC---EEEEeecCcceeeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----
Q 042690          132 DYF---TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----  203 (266)
Q Consensus       132 ~~~---~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----  203 (266)
                      .++   .++|+|||++.....  ........||+.|+|||.+.+ .++.++||||+|+++|+|++|..||.....     
T Consensus       181 ~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~  257 (504)
T 3q5i_A          181 NKNSLLNIKIVDFGLSSFFSK--DYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK  257 (504)
T ss_dssp             STTCCSSEEECCCTTCEECCT--TSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             cCCCCccEEEEECCCCEEcCC--CCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            876   699999999987643  223345678999999998874 689999999999999999999999976221     


Q ss_pred             --------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 --------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 --------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                    ...+..+.+++.+||+.||.+|||++++++
T Consensus       258 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          258 KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                          234567889999999999999999999985


No 192
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=4.5e-36  Score=255.09  Aligned_cols=216  Identities=18%  Similarity=0.189  Sum_probs=158.7

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcC-CCceeeeeeEEEe--------CC
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAH-HKNLVCLLGYHIE--------QE   81 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~-h~~iv~~~~~~~~--------~~   81 (266)
                      +|.+.+.||+|+||.||+|.+. .++..||+|++.              .+++.+. ||||+++++++..        ..
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~  107 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDV-GSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA  107 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred             eEEEEEEEccCCceEEEEEEEC-CCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence            7999999999999999999976 678899999762              2666775 9999999999842        34


Q ss_pred             eEEEEEEcCCCCCHHHHHhh---cCCCC------HHHHHHHHHHHhhhcC--cccc-----ceeecCCCEEEEeecCcce
Q 042690           82 CRLLVYKFMHNRSISSLLYE---CLRPT------WQQRMQDCIRDCWRTR--ALAC-----RILLHDYFTVETSDLGLAK  145 (266)
Q Consensus        82 ~~~lv~e~~~~~~L~~~l~~---~~~~~------~~~~l~~~~~~~~~~~--~~h~-----nili~~~~~~~l~Dfg~a~  145 (266)
                      .++++|||+. |+|.+++..   ...+.      +..++..++.++|..+  ++|+     ||+++.++.++|+|||++.
T Consensus       108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  186 (337)
T 3ll6_A          108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT  186 (337)
T ss_dssp             EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred             eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence            5889999996 599998864   23333      4455666678888777  7776     8999999999999999998


Q ss_pred             eecccccc-----------ccccccCCCCcCCcccc---CCCCCCcccchhhHHHHHHHHHhCCCcccCCC---------
Q 042690          146 LLMINQTQ-----------TLTGMRETKGYLPPEWF---RNMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------  202 (266)
Q Consensus       146 ~~~~~~~~-----------~~~~~~~~~~y~aPE~~---~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------  202 (266)
                      ........           ......+|+.|+|||++   .+..++.++||||||+++|+|++|+.||....         
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~  266 (337)
T 3ll6_A          187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKY  266 (337)
T ss_dssp             CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------C
T ss_pred             eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCcc
Confidence            75432211           11134589999999988   56678999999999999999999999986521         


Q ss_pred             ----CccccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          203 ----DPKTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       203 ----~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                          .......+.+++.+||+.||.+||+++++++.|+.+....
T Consensus       267 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          267 SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             CCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             cCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence                2334466889999999999999999999999999996643


No 193
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=8.6e-36  Score=261.38  Aligned_cols=206  Identities=16%  Similarity=0.177  Sum_probs=162.9

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------------HHhhhcCCCceeeeeeEEEeCC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------------KVVHVAHHKNLVCLLGYHIEQE   81 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------------~~l~~~~h~~iv~~~~~~~~~~   81 (266)
                      .+|.+.+.||+|+||.||+|.+. .++..||+|++.                      .+++.++||||+++++++. .+
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~  212 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFER-KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AE  212 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SS
T ss_pred             ccEEEEeEEeeCCCeEEEEEEEC-CCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence            47999999999999999999976 678889998642                      3788899999999999975 45


Q ss_pred             eEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCC---EEEEeecCcceee
Q 042690           82 CRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYF---TVETSDLGLAKLL  147 (266)
Q Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~---~~~l~Dfg~a~~~  147 (266)
                      ..++||||+++++|.+++.....+.      +..++..++.++|..+++|+     ||+++.++   .+||+|||+++..
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~  292 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL  292 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSC
T ss_pred             ceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceec
Confidence            6889999999999999987766654      34566677788888888887     89997554   5999999999875


Q ss_pred             ccccccccccccCCCCcCCccccCC---CCCCcccchhhHHHHHHHHHhCCCcccCCCC--------------------c
Q 042690          148 MINQTQTLTGMRETKGYLPPEWFRN---MPVTVKVDVYSFGVMLLEIISCRCVERQGSD--------------------P  204 (266)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~--------------------~  204 (266)
                      ..  ........||+.|+|||++.+   ..++.++||||||+++|+|++|..||.....                    .
T Consensus       293 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~  370 (419)
T 3i6u_A          293 GE--TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA  370 (419)
T ss_dssp             C-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHT
T ss_pred             CC--CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhc
Confidence            42  223334668999999998753   5678899999999999999999999975221                    1


Q ss_pred             cccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          205 KTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       205 ~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      .....+.+++.+||+.||.+||+++++++
T Consensus       371 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          371 EVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            23567788999999999999999999876


No 194
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=2.3e-35  Score=254.16  Aligned_cols=219  Identities=14%  Similarity=0.163  Sum_probs=176.7

Q ss_pred             cCceeeeeccCCCcceEEEEEEE----cCCCcceeeeeeHH-----------HHhhhcC---CCceeeeeeEEEeCCeEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVL----APGDKTNIGVKKLD-----------KVVHVAH---HKNLVCLLGYHIEQECRL   84 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~----~~~~~~~vaiK~~~-----------~~l~~~~---h~~iv~~~~~~~~~~~~~   84 (266)
                      -..|.+.+.||+|+||.||+|.+    ....+..||+|++.           .+++.++   |+||+++++++..++..+
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~  143 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV  143 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE
Confidence            35699999999999999999952    22578899999865           2455555   999999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhh-----cCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecC-----------CCEEE
Q 042690           85 LVYKFMHNRSISSLLYE-----CLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHD-----------YFTVE  137 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~-----~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~-----------~~~~~  137 (266)
                      +||||+++|+|.+++..     ...++      +..++..++.++|..+++|+     |||++.           ++.+|
T Consensus       144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k  223 (365)
T 3e7e_A          144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLA  223 (365)
T ss_dssp             EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred             EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEE
Confidence            99999999999999974     22333      45666677788888888887     999998           89999


Q ss_pred             EeecCcceeecc-ccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------cc
Q 042690          138 TSDLGLAKLLMI-NQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------PK  205 (266)
Q Consensus       138 l~Dfg~a~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------~~  205 (266)
                      |+|||+++.... ..........||+.|+|||++.+..++.++|||||||++|+|+||+.||.....           ..
T Consensus       224 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~  303 (365)
T 3e7e_A          224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLP  303 (365)
T ss_dssp             ECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEECSCCTTCS
T ss_pred             EeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeechhccccC
Confidence            999999976532 222334456799999999999998999999999999999999999998854211           11


Q ss_pred             ccchHHHHHHHhhhcCCCCC-CCHHHHHHHHHHHHhC
Q 042690          206 TLEKPVMIAIQFVKEKPPLR-PSLRIVALMLQSILEV  241 (266)
Q Consensus       206 ~~~~~~~l~~~cl~~~p~~R-ps~~~il~~l~~~~~~  241 (266)
                      ....+.+++..|++.+|.+| |++.++.+.|+.+...
T Consensus       304 ~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          304 HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence            24466789999999999998 6788999999998765


No 195
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.2e-36  Score=252.48  Aligned_cols=213  Identities=18%  Similarity=0.206  Sum_probs=169.7

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEe--CCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIE--QECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~--~~~~   83 (266)
                      ..++|.+.+.||+|+||.||++.+. .+++.+++|.+.                .+++.++||||+++++++..  ....
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   82 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL   82 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred             chhheeeehhccCCCCcEEEEEEEC-CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence            3568999999999999999999986 678889998763                36788899999999998854  5678


Q ss_pred             EEEEEcCCCCCHHHHHhhcC----CCC------HHHHHHHHHHHhhhcC-----cccc-----ceeecCCCEEEEeecCc
Q 042690           84 LLVYKFMHNRSISSLLYECL----RPT------WQQRMQDCIRDCWRTR-----ALAC-----RILLHDYFTVETSDLGL  143 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~----~~~------~~~~l~~~~~~~~~~~-----~~h~-----nili~~~~~~~l~Dfg~  143 (266)
                      ++||||+++++|.+++....    .++      +..++..++.++|..+     ++|+     ||+++.++.++|+|||+
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~  162 (279)
T 2w5a_A           83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL  162 (279)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred             EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence            99999999999999997532    133      3445555666666665     6665     99999999999999999


Q ss_pred             ceeeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC----------------CCcccc
Q 042690          144 AKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG----------------SDPKTL  207 (266)
Q Consensus       144 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~----------------~~~~~~  207 (266)
                      +....... .......++..|+|||.+.+..++.++||||||+++|+|++|+.||...                .+....
T Consensus       163 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~  241 (279)
T 2w5a_A          163 ARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS  241 (279)
T ss_dssp             HHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSC
T ss_pred             heeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccC
Confidence            97654221 1122346799999999998888999999999999999999999998652                123345


Q ss_pred             chHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 042690          208 EKPVMIAIQFVKEKPPLRPSLRIVALMLQ  236 (266)
Q Consensus       208 ~~~~~l~~~cl~~~p~~Rps~~~il~~l~  236 (266)
                      ..+.+++.+||+.||.+||+++++++.+.
T Consensus       242 ~~l~~li~~~l~~~p~~Rps~~~ll~~~~  270 (279)
T 2w5a_A          242 DELNEIITRMLNLKDYHRPSVEEILENPL  270 (279)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence            67889999999999999999999998654


No 196
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=1.1e-35  Score=258.34  Aligned_cols=206  Identities=17%  Similarity=0.199  Sum_probs=164.4

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcC--CCceeeeeeEEEeCCeEEEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAH--HKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~--h~~iv~~~~~~~~~~~~~lv   86 (266)
                      .|.+.+.||+|+||.||++.+.  .++.||+|++.                .+++.++  ||||+++++++..++..++|
T Consensus        57 ~y~~~~~LG~G~fg~Vy~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           57 IYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             EEEEEEEEECCSSEEEEEEECT--TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             ceEEEEEEccCCCeEEEEEEcC--CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            5999999999999999999975  48889999763                2666776  59999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc-c
Q 042690           87 YKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ-T  154 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~-~  154 (266)
                      || +.+++|.+++.....+.      +..++..++.++|..+++|+     |||++ ++.+||+|||+++........ .
T Consensus       135 ~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~  212 (390)
T 2zmd_A          135 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVV  212 (390)
T ss_dssp             EE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--------
T ss_pred             Ee-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcccc
Confidence            99 56789999998766554      34566677788888888887     89995 589999999999876433222 2


Q ss_pred             cccccCCCCcCCccccCC-----------CCCCcccchhhHHHHHHHHHhCCCcccCCC------------------Ccc
Q 042690          155 LTGMRETKGYLPPEWFRN-----------MPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPK  205 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~-----------~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~  205 (266)
                      .....||+.|+|||++.+           ..++.++|||||||++|+|++|+.||....                  +..
T Consensus       213 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  292 (390)
T 2zmd_A          213 KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI  292 (390)
T ss_dssp             -CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCC
T ss_pred             CCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCcc
Confidence            334678999999998764           368899999999999999999999996521                  222


Q ss_pred             ccchHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          206 TLEKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       206 ~~~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                      ....+.+++.+||+.||.+||++.++++.
T Consensus       293 ~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          293 PEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            34568899999999999999999999854


No 197
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=5.6e-36  Score=263.59  Aligned_cols=209  Identities=17%  Similarity=0.189  Sum_probs=166.2

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeC-----C
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQ-----E   81 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~-----~   81 (266)
                      -++|.+.+.||+|+||.||+|.+. .++..||+|++.                .+++.++||||+++++++...     .
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDK-NTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEEC-CCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            357999999999999999999986 678899999763                378889999999999998765     5


Q ss_pred             eEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccc
Q 042690           82 CRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMIN  150 (266)
Q Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~  150 (266)
                      ..|+||||+.+ +|.+++.....++      +..++..++.++|..+++|+     ||+++.++.+||+|||+++.....
T Consensus       104 ~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~  182 (432)
T 3n9x_A          104 ELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE  182 (432)
T ss_dssp             CEEEEEECCSE-EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred             eEEEEEecCCc-CHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence            68999999975 9999998765544      44566677788888888887     999999999999999999876432


Q ss_pred             cc---------------------cccccccCCCCcCCcccc-CCCCCCcccchhhHHHHHHHHHhCCCc-----------
Q 042690          151 QT---------------------QTLTGMRETKGYLPPEWF-RNMPVTVKVDVYSFGVMLLEIISCRCV-----------  197 (266)
Q Consensus       151 ~~---------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~slG~i~~~l~tg~~p-----------  197 (266)
                      ..                     .......||+.|+|||++ .+..++.++|||||||++|+|++|..|           
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~  262 (432)
T 3n9x_A          183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPL  262 (432)
T ss_dssp             ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCS
T ss_pred             ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccccccc
Confidence            21                     122456789999999985 566699999999999999999985433           


Q ss_pred             ccCCCC---------------------------------------------------------------ccccchHHHHH
Q 042690          198 ERQGSD---------------------------------------------------------------PKTLEKPVMIA  214 (266)
Q Consensus       198 ~~~~~~---------------------------------------------------------------~~~~~~~~~l~  214 (266)
                      |.+...                                                               +.....+.+++
T Consensus       263 f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl  342 (432)
T 3n9x_A          263 FPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLL  342 (432)
T ss_dssp             CCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHH
T ss_pred             CCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHH
Confidence            322110                                                               23456778999


Q ss_pred             HHhhhcCCCCCCCHHHHHH
Q 042690          215 IQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~  233 (266)
                      .+||+.||.+|||++++++
T Consensus       343 ~~mL~~dP~~R~ta~e~L~  361 (432)
T 3n9x_A          343 ESMLKFNPNKRITIDQALD  361 (432)
T ss_dssp             HHHSCSSTTTSCCHHHHHT
T ss_pred             HHHhcCCcccCCCHHHHhc
Confidence            9999999999999999986


No 198
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=4.3e-36  Score=259.36  Aligned_cols=208  Identities=19%  Similarity=0.194  Sum_probs=161.6

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCC-----
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQE-----   81 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~-----   81 (266)
                      .++|.+.+.||+|+||.||+|.+. .++..||+|++.                .+++.++||||+++++++....     
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~  102 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDA-ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  102 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred             hhheeEeeeeEecCCEEEEEEEEC-CCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence            468999999999999999999975 678889999763                3777889999999999997654     


Q ss_pred             -eEEEEEEcCCCCCHHHHHhhcCC----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccc
Q 042690           82 -CRLLVYKFMHNRSISSLLYECLR----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        82 -~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~  151 (266)
                       ..++||||+.+ +|.+++.....    ..+..++..++.++|..+++|+     ||+++.++.+||+|||++.....  
T Consensus       103 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~--  179 (371)
T 2xrw_A          103 QDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--  179 (371)
T ss_dssp             CEEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC--------
T ss_pred             cceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccc--
Confidence             68999999975 88888863211    2355667777788888888887     89999999999999999986532  


Q ss_pred             ccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCCc---------------------------
Q 042690          152 TQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDP---------------------------  204 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~---------------------------  204 (266)
                      ........+|+.|+|||++.+..++.++|||||||++|+|++|+.||......                           
T Consensus       180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  259 (371)
T 2xrw_A          180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT  259 (371)
T ss_dssp             ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHH
T ss_pred             ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence            22233467899999999999888999999999999999999999999652210                           


Q ss_pred             ------------------------------cccchHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          205 ------------------------------KTLEKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       205 ------------------------------~~~~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                                                    .....+.+++.+||+.||.+|||++++++.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                                          003456789999999999999999999863


No 199
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=5.9e-36  Score=274.57  Aligned_cols=209  Identities=20%  Similarity=0.218  Sum_probs=169.0

Q ss_pred             eccCCCcceEEEEEEEc-CCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEcCCC
Q 042690           30 KKPCGGSFSTVYTGVLA-PGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKFMHN   92 (266)
Q Consensus        30 ~~ig~G~~g~V~~~~~~-~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   92 (266)
                      +.||+|+||.||+|.+. ...+..||+|++.                .+++.++||||+++++++.. +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            47999999999999764 2456789999764                37888999999999999864 458899999999


Q ss_pred             CCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc--ccccccc
Q 042690           93 RSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT--QTLTGMR  159 (266)
Q Consensus        93 ~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~--~~~~~~~  159 (266)
                      |+|.+++.....+.      +..++..++.++|.++++|+     |||++.++.+||+|||+++.......  .......
T Consensus       454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~  533 (635)
T 4fl3_A          454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK  533 (635)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------------
T ss_pred             CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCC
Confidence            99999998766554      44566667788888888887     99999999999999999987543222  1222345


Q ss_pred             CCCCcCCccccCCCCCCcccchhhHHHHHHHHHh-CCCcccCC----------------CCccccchHHHHHHHhhhcCC
Q 042690          160 ETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIIS-CRCVERQG----------------SDPKTLEKPVMIAIQFVKEKP  222 (266)
Q Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~----------------~~~~~~~~~~~l~~~cl~~~p  222 (266)
                      +++.|+|||++.+..++.++||||||+++|+|++ |+.||...                .+......+.+++.+||+.||
T Consensus       534 ~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP  613 (635)
T 4fl3_A          534 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDV  613 (635)
T ss_dssp             -CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSST
T ss_pred             CceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCH
Confidence            6788999999988889999999999999999998 99999762                234456788999999999999


Q ss_pred             CCCCCHHHHHHHHHHHH
Q 042690          223 PLRPSLRIVALMLQSIL  239 (266)
Q Consensus       223 ~~Rps~~~il~~l~~~~  239 (266)
                      .+||+++++++.|+.+.
T Consensus       614 ~~RPs~~~l~~~L~~~~  630 (635)
T 4fl3_A          614 ENRPGFAAVELRLRNYY  630 (635)
T ss_dssp             TTSCCHHHHHHHHHHHH
T ss_pred             hHCcCHHHHHHHHHHHH
Confidence            99999999999998864


No 200
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=7.3e-36  Score=248.25  Aligned_cols=204  Identities=14%  Similarity=0.164  Sum_probs=166.6

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhc-CCCceeeeeeEEEeCCeEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVA-HHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~-~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      ++|.+.+.||+|+||.||+|.+. .++..||+|.+.                ..+..+ +||||+++++++.+++..++|
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKR-LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEc-CCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            37999999999999999999985 578899999764                144455 899999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhc----CCC------CHHHHHHHHHHHhhhcCcccc-----ceeecCC------------------
Q 042690           87 YKFMHNRSISSLLYEC----LRP------TWQQRMQDCIRDCWRTRALAC-----RILLHDY------------------  133 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~----~~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~------------------  133 (266)
                      |||+++++|.+++...    ..+      .+..++..++.++|..+++|+     ||+++.+                  
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence            9999999999999754    333      345666777788888887777     8999844                  


Q ss_pred             -CEEEEeecCcceeeccccccccccccCCCCcCCccccCCC-CCCcccchhhHHHHHHHHHhCCCcccC-----------
Q 042690          134 -FTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNM-PVTVKVDVYSFGVMLLEIISCRCVERQ-----------  200 (266)
Q Consensus       134 -~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~i~~~l~tg~~p~~~-----------  200 (266)
                       ..++|+|||.+......     ....++..|+|||.+.+. .++.++||||||+++|+|++|.+++..           
T Consensus       170 ~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~  244 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQGR  244 (289)
T ss_dssp             CCCEEECCCTTCEETTCS-----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTTC
T ss_pred             ceEEEEcccccccccCCc-----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcCC
Confidence             47899999999875422     223489999999988765 567899999999999999999986644           


Q ss_pred             --CCCccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          201 --GSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       201 --~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                        ..+......+.+++.+||+.||.+||++.++++
T Consensus       245 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          245 LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence              223455678899999999999999999999875


No 201
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=4.1e-36  Score=256.19  Aligned_cols=216  Identities=17%  Similarity=0.167  Sum_probs=171.0

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------HHhhh--cCCCceeeeeeEEEeCC----eEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------KVVHV--AHHKNLVCLLGYHIEQE----CRLLV   86 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------~~l~~--~~h~~iv~~~~~~~~~~----~~~lv   86 (266)
                      .+|.+.+.||+|+||.||+|.+   +++.||+|.+.           ++++.  ++||||+++++++....    ..++|
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv  118 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV  118 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred             ccEEEEeeecCCCCcEEEEEEE---cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence            4799999999999999999997   57899999864           24444  78999999999998775    78999


Q ss_pred             EEcCCCCCHHHHHhhcCC-----CCHHHHHHHHHHHhh--------hcCcccc-----ceeecCCCEEEEeecCcceeec
Q 042690           87 YKFMHNRSISSLLYECLR-----PTWQQRMQDCIRDCW--------RTRALAC-----RILLHDYFTVETSDLGLAKLLM  148 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~-----~~~~~~l~~~~~~~~--------~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~  148 (266)
                      |||+++++|.+++.....     ..+..++..++.++|        ..+++|+     ||+++.++.++|+|||++....
T Consensus       119 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~  198 (342)
T 1b6c_B          119 SDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  198 (342)
T ss_dssp             ECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             EeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceecc
Confidence            999999999999975321     234455666667777        5666665     9999999999999999998765


Q ss_pred             ccccc---ccccccCCCCcCCccccCCCC------CCcccchhhHHHHHHHHHhC----------CCcccCCCC------
Q 042690          149 INQTQ---TLTGMRETKGYLPPEWFRNMP------VTVKVDVYSFGVMLLEIISC----------RCVERQGSD------  203 (266)
Q Consensus       149 ~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~~Di~slG~i~~~l~tg----------~~p~~~~~~------  203 (266)
                      .....   ......+|+.|+|||++.+..      ++.++||||||+++|+|+||          ..||.....      
T Consensus       199 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~  278 (342)
T 1b6c_B          199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE  278 (342)
T ss_dssp             TTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred             ccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHH
Confidence            33221   223457899999999887652      34689999999999999999          667754210      


Q ss_pred             ------------c---------cccchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHhCC
Q 042690          204 ------------P---------KTLEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       204 ------------~---------~~~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~~~  242 (266)
                                  +         .....+.+++.+||+.||.+||++.++++.|+.+.+..
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          279 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             HHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence                        1         11235778999999999999999999999999997753


No 202
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.1e-35  Score=257.88  Aligned_cols=207  Identities=16%  Similarity=0.175  Sum_probs=166.8

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------HHhhhcCCCceeeeeeEEEeC------------
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------KVVHVAHHKNLVCLLGYHIEQ------------   80 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------~~l~~~~h~~iv~~~~~~~~~------------   80 (266)
                      ..+|.+.+.||+|+||.||+|.+. .++..||+|++.          .+++.++||||+++++++...            
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~   84 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDI-ESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD   84 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEET-TTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred             cceEEEEEEEEeccCEEEEEEEEC-CCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence            458999999999999999999976 678899999764          588899999999999998543            


Q ss_pred             --------------------------CeEEEEEEcCCCCCHHHHHhh----cCCCC------HHHHHHHHHHHhhhcCcc
Q 042690           81 --------------------------ECRLLVYKFMHNRSISSLLYE----CLRPT------WQQRMQDCIRDCWRTRAL  124 (266)
Q Consensus        81 --------------------------~~~~lv~e~~~~~~L~~~l~~----~~~~~------~~~~l~~~~~~~~~~~~~  124 (266)
                                                ...++||||+.+ +|.+.+..    ...+.      +..++..++.++|..+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~  163 (383)
T 3eb0_A           85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGIC  163 (383)
T ss_dssp             -------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             ccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCc
Confidence                                      238899999985 88777763    23333      456677777888888888


Q ss_pred             cc-----ceeec-CCCEEEEeecCcceeeccccccccccccCCCCcCCccccCCCC-CCcccchhhHHHHHHHHHhCCCc
Q 042690          125 AC-----RILLH-DYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMP-VTVKVDVYSFGVMLLEIISCRCV  197 (266)
Q Consensus       125 h~-----nili~-~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~i~~~l~tg~~p  197 (266)
                      |+     ||+++ .++.++|+|||+++.....  .......+|+.|+|||.+.+.. ++.++||||+||++|+|++|+.|
T Consensus       164 H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p  241 (383)
T 3eb0_A          164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS--EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL  241 (383)
T ss_dssp             CSCCCGGGEEEETTTTEEEECCCTTCEECCTT--SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCccCHHHEEEcCCCCcEEEEECCCCcccCCC--CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCC
Confidence            77     89998 6899999999999876422  2334456799999999887654 89999999999999999999999


Q ss_pred             ccCCC--------------------------------------------CccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          198 ERQGS--------------------------------------------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       198 ~~~~~--------------------------------------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      |....                                            +......+.+++.+||+.||.+|||+.|+++
T Consensus       242 f~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          242 FSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             SCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            97632                                            1123445789999999999999999999974


No 203
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=3.4e-36  Score=252.42  Aligned_cols=210  Identities=16%  Similarity=0.196  Sum_probs=168.3

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      ..+.|.+.+.||+|+||.||+|.+. .++..+++|.+.              .+++.++||||+++++++..++..++||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   95 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNK-ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI   95 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEET-TTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEc-CCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence            3457999999999999999999986 568889998753              3778899999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccc
Q 042690           88 KFMHNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTL  155 (266)
Q Consensus        88 e~~~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~  155 (266)
                      ||+++++|.+++... ..++      +..++..++.++|..+++|+     ||+++.++.++|+|||++...... ....
T Consensus        96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~  174 (302)
T 2j7t_A           96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQKR  174 (302)
T ss_dssp             ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC-
T ss_pred             EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-cccc
Confidence            999999999998753 3333      44556666788888888776     899999999999999997643211 1122


Q ss_pred             ccccCCCCcCCcccc-----CCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------CccccchHHH
Q 042690          156 TGMRETKGYLPPEWF-----RNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLEKPVM  212 (266)
Q Consensus       156 ~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~~~~~  212 (266)
                      ....++..|+|||.+     .+..++.++||||||+++|+|++|..||....                  +......+.+
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  254 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRD  254 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHH
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHH
Confidence            335689999999987     46678899999999999999999999987521                  2234456889


Q ss_pred             HHHHhhhcCCCCCCCHHHHHH
Q 042690          213 IAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       213 l~~~cl~~~p~~Rps~~~il~  233 (266)
                      ++.+||+.||.+||+++++++
T Consensus       255 li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          255 FLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHHHHSCSCTTTSCCHHHHTT
T ss_pred             HHHHHcccChhhCCCHHHHhc
Confidence            999999999999999998875


No 204
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=3.7e-36  Score=250.73  Aligned_cols=207  Identities=14%  Similarity=0.175  Sum_probs=160.0

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH----------------HhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK----------------VVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~----------------~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      .++|.+.+.||+|+||.||+|.+. .+++.||+|++..                .++.++||||+++++++.+++..++|
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHV-PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEec-CCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            468999999999999999999986 6788999997641                36678999999999999999999999


Q ss_pred             EEcCCCCCHHHHHhh----cCCCC------HHHHHHHHHHHhhhc-Ccccc-----ceeecCCCEEEEeecCcceeeccc
Q 042690           87 YKFMHNRSISSLLYE----CLRPT------WQQRMQDCIRDCWRT-RALAC-----RILLHDYFTVETSDLGLAKLLMIN  150 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~----~~~~~------~~~~l~~~~~~~~~~-~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~  150 (266)
                      |||+++ +|.+++..    ...++      +..++..++.++|.. +++|+     ||+++.++.++|+|||++......
T Consensus        85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  163 (290)
T 3fme_A           85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD  163 (290)
T ss_dssp             EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred             Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence            999975 88887754    23333      445666667777776 77776     899999999999999999875422


Q ss_pred             cccccccccCCCCcCCcccc----CCCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------Cccccc
Q 042690          151 QTQTLTGMRETKGYLPPEWF----RNMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTLE  208 (266)
Q Consensus       151 ~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~~  208 (266)
                        .......+|+.|+|||++    .+..++.++||||||+++|+|+||+.||....                  ......
T Consensus       164 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (290)
T 3fme_A          164 --VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA  241 (290)
T ss_dssp             --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCH
T ss_pred             --ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCH
Confidence              222334689999999985    45678999999999999999999999996411                  123556


Q ss_pred             hHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          209 KPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      .+.+++.+||+.||.+||++.++++
T Consensus       242 ~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          242 EFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHHh
Confidence            7889999999999999999999986


No 205
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.4e-35  Score=255.56  Aligned_cols=207  Identities=17%  Similarity=0.220  Sum_probs=170.3

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------------HHhhhc-CCCceeeeeeEEEeC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------------KVVHVA-HHKNLVCLLGYHIEQ   80 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------------~~l~~~-~h~~iv~~~~~~~~~   80 (266)
                      .+|.+.+.||+|++|.||+|.+. .++..||+|++.                      .+++.+ +||||+++++++...
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  172 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHR-ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS  172 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred             hhcccceEEecCCCEEEEEEEEC-CCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence            46999999999999999999985 568899999642                      255666 799999999999999


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           81 ECRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                      +..++||||+++++|.+++.....+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++.....
T Consensus       173 ~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~  252 (365)
T 2y7j_A          173 SFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP  252 (365)
T ss_dssp             SEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             CEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence            99999999999999999998765544      44556666677887777776     99999999999999999987642


Q ss_pred             ccccccccccCCCCcCCccccCC------CCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------c
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRN------MPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------P  204 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------~  204 (266)
                      .  .......||+.|+|||.+.+      ..++.++||||||+++|+|++|..||.....                   .
T Consensus       253 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  330 (365)
T 2y7j_A          253 G--EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWD  330 (365)
T ss_dssp             T--CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHS
T ss_pred             C--cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccc
Confidence            2  23345678999999998752      3578899999999999999999999865211                   1


Q ss_pred             cccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          205 KTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       205 ~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      .....+.+++.+||+.||.+||+++++++
T Consensus       331 ~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          331 DRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            23445889999999999999999999986


No 206
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=7.7e-36  Score=249.37  Aligned_cols=208  Identities=16%  Similarity=0.218  Sum_probs=168.1

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEEeCCeEEEEEEc
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHIEQECRLLVYKF   89 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   89 (266)
                      .++.....||+|+||.||+|.+. .++..||+|.+.              .+++.++||||+++++++...+..++||||
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  100 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDL-SNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ  100 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEET-TTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cCCCCcEEEeecCcEEEEEEEEC-CCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence            34445558999999999999976 678889999653              477889999999999999999999999999


Q ss_pred             CCCCCHHHHHhhcCC---CC------HHHHHHHHHHHhhhcCcccc-----ceeecC-CCEEEEeecCcceeeccccccc
Q 042690           90 MHNRSISSLLYECLR---PT------WQQRMQDCIRDCWRTRALAC-----RILLHD-YFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        90 ~~~~~L~~~l~~~~~---~~------~~~~l~~~~~~~~~~~~~h~-----nili~~-~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      +++++|.+++.....   ..      +..++..++.++|..+++|+     ||+++. ++.++|+|||++...... ...
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~-~~~  179 (295)
T 2clq_A          101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI-NPC  179 (295)
T ss_dssp             CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred             CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCC-CCc
Confidence            999999999986422   12      34566777788888888877     899987 899999999999875422 122


Q ss_pred             cccccCCCCcCCccccCCCC--CCcccchhhHHHHHHHHHhCCCcccC------------------CCCccccchHHHHH
Q 042690          155 LTGMRETKGYLPPEWFRNMP--VTVKVDVYSFGVMLLEIISCRCVERQ------------------GSDPKTLEKPVMIA  214 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~i~~~l~tg~~p~~~------------------~~~~~~~~~~~~l~  214 (266)
                      .....+++.|+|||.+.+..  ++.++||||||+++|+|++|+.||..                  ..+......+.+++
T Consensus       180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  259 (295)
T 2clq_A          180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFI  259 (295)
T ss_dssp             -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHH
T ss_pred             ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHH
Confidence            23456899999999886543  78899999999999999999999864                  12334566788999


Q ss_pred             HHhhhcCCCCCCCHHHHHH
Q 042690          215 IQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~  233 (266)
                      .+||+.||.+||+++++++
T Consensus       260 ~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          260 LKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHTTCSSTTTSCCHHHHHT
T ss_pred             HHHccCChhhCCCHHHHhc
Confidence            9999999999999999975


No 207
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=7.1e-35  Score=259.20  Aligned_cols=215  Identities=14%  Similarity=0.156  Sum_probs=175.7

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhcCC-CceeeeeeEEEeCCeEEEEEEcC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVAHH-KNLVCLLGYHIEQECRLLVYKFM   90 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~~h-~~iv~~~~~~~~~~~~~lv~e~~   90 (266)
                      .+|.+.+.||+|+||.||+|.+. .++..||||.+.            ++++.++| +++..+..++......++||||+
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~-~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEET-TTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CcEEEEEEEeeCCCEEEEEEEEC-CCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            47999999999999999999975 678899999654            47778876 56666667777788899999999


Q ss_pred             CCCCHHHHHhhc-CCCC------HHHHHHHHHHHhhhcCcccc-----ceee---cCCCEEEEeecCcceeecccccc--
Q 042690           91 HNRSISSLLYEC-LRPT------WQQRMQDCIRDCWRTRALAC-----RILL---HDYFTVETSDLGLAKLLMINQTQ--  153 (266)
Q Consensus        91 ~~~~L~~~l~~~-~~~~------~~~~l~~~~~~~~~~~~~h~-----nili---~~~~~~~l~Dfg~a~~~~~~~~~--  153 (266)
                       +++|.+++... ..+.      +..++..++.++|..+++|+     |||+   +.++.++|+|||+++........  
T Consensus        86 -g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~  164 (483)
T 3sv0_A           86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH  164 (483)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB
T ss_pred             -CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc
Confidence             88999999753 3333      44566667788888888877     8999   68899999999999876533221  


Q ss_pred             ----ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------------ccc
Q 042690          154 ----TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------------PKT  206 (266)
Q Consensus       154 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------------~~~  206 (266)
                          ......||..|+|||.+.+..++.++|||||||++|+|++|+.||.....                       ...
T Consensus       165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  244 (483)
T 3sv0_A          165 IPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGY  244 (483)
T ss_dssp             CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTS
T ss_pred             cccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCC
Confidence                12246789999999999999999999999999999999999999976322                       233


Q ss_pred             cchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHh
Q 042690          207 LEKPVMIAIQFVKEKPPLRPSLRIVALMLQSILE  240 (266)
Q Consensus       207 ~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~~  240 (266)
                      ...+.+++..||+.+|.+||++++|++.|+.+..
T Consensus       245 p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~  278 (483)
T 3sv0_A          245 PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI  278 (483)
T ss_dssp             CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            5678889999999999999999999999988844


No 208
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-35  Score=251.88  Aligned_cols=211  Identities=16%  Similarity=0.205  Sum_probs=165.4

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhc-CCCceeeeeeEEEe------C
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVA-HHKNLVCLLGYHIE------Q   80 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~-~h~~iv~~~~~~~~------~   80 (266)
                      ...+.|.+.+.||+|+||.||+|.+. .+++.||+|.+.             .+++.+ +||||+++++++..      .
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   99 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHV-KTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   99 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEEC-CCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence            34568999999999999999999986 578899999763             356676 79999999999987      4


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhcC--CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceee
Q 042690           81 ECRLLVYKFMHNRSISSLLYECL--RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLL  147 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~--~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~  147 (266)
                      +..++||||+++++|.+++....  .+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++...
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  179 (326)
T 2x7f_A          100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  179 (326)
T ss_dssp             CEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred             ceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence            67899999999999999998542  333      44566677788888888877     899999999999999999865


Q ss_pred             ccccccccccccCCCCcCCccccC-----CCCCCcccchhhHHHHHHHHHhCCCcccCCC-----------------Ccc
Q 042690          148 MINQTQTLTGMRETKGYLPPEWFR-----NMPVTVKVDVYSFGVMLLEIISCRCVERQGS-----------------DPK  205 (266)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-----------------~~~  205 (266)
                      ... ........++..|+|||++.     +..++.++||||||+++|+|++|..||....                 ...
T Consensus       180 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  258 (326)
T 2x7f_A          180 DRT-VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK  258 (326)
T ss_dssp             ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSC
T ss_pred             CcC-ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccc
Confidence            422 11223456899999999886     4568899999999999999999999986521                 223


Q ss_pred             ccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          206 TLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       206 ~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      ....+.+++.+||+.||.+||+++++++
T Consensus       259 ~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          259 WSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            4567889999999999999999999876


No 209
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=2.7e-35  Score=246.47  Aligned_cols=210  Identities=18%  Similarity=0.201  Sum_probs=173.1

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------------HHhhhcC-CCceeeeeeE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------------KVVHVAH-HKNLVCLLGY   76 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------------~~l~~~~-h~~iv~~~~~   76 (266)
                      +-.++|.+.+.||+|++|.||+|.++ .+++.||+|.+.                       .+++.+. ||||++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT   92 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEc-CcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence            44678999999999999999999986 678899999752                       2566775 9999999999


Q ss_pred             EEeCCeEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcce
Q 042690           77 HIEQECRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAK  145 (266)
Q Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~  145 (266)
                      +..++..++||||+++++|.+++.....++      +..++..++.++|.++++|+     ||+++.++.++|+|||++.
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  172 (298)
T 1phk_A           93 YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC  172 (298)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             eccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchh
Confidence            999999999999999999999998765544      44556666688888877776     8999999999999999998


Q ss_pred             eeccccccccccccCCCCcCCccccC------CCCCCcccchhhHHHHHHHHHhCCCcccCCC-----------------
Q 042690          146 LLMINQTQTLTGMRETKGYLPPEWFR------NMPVTVKVDVYSFGVMLLEIISCRCVERQGS-----------------  202 (266)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-----------------  202 (266)
                      .....  .......+++.|+|||.+.      ...++.++||||||+++|+|++|..||....                 
T Consensus       173 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  250 (298)
T 1phk_A          173 QLDPG--EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS  250 (298)
T ss_dssp             ECCTT--CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred             hcCCC--cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCc
Confidence            75422  2233456899999999874      4567889999999999999999999986521                 


Q ss_pred             --CccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          203 --DPKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       203 --~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                        .......+.+++.+||+.||.+||+++++++
T Consensus       251 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence              1234567889999999999999999999875


No 210
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=6.7e-36  Score=253.84  Aligned_cols=207  Identities=15%  Similarity=0.182  Sum_probs=166.5

Q ss_pred             ceeee-eccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhc-CCCceeeeeeEEEeCCeEEEE
Q 042690           25 HIYSL-KKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVA-HHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        25 ~~~~~-~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~-~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      .|.+. +.||+|+||.||+|.+. .++..||+|.+.                .+++.+ .||||+++++++...+..++|
T Consensus        29 ~y~~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv  107 (327)
T 3lm5_A           29 FYILTSKELGRGKFAVVRQCISK-STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI  107 (327)
T ss_dssp             HEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             EEeeccceeCCCCCeEEEEEEEC-CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence            46665 88999999999999986 678899999764                255566 469999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhc--CCC------CHHHHHHHHHHHhhhcCcccc-----ceeecC---CCEEEEeecCcceeeccc
Q 042690           87 YKFMHNRSISSLLYEC--LRP------TWQQRMQDCIRDCWRTRALAC-----RILLHD---YFTVETSDLGLAKLLMIN  150 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~--~~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~---~~~~~l~Dfg~a~~~~~~  150 (266)
                      |||+.+++|.+++...  ..+      .+..++..++.++|..+++|+     ||+++.   ++.++|+|||++......
T Consensus       108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~  187 (327)
T 3lm5_A          108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA  187 (327)
T ss_dssp             EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred             EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence            9999999999998643  233      345666677788888777776     899987   789999999999876422


Q ss_pred             cccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC-------------------CccccchHH
Q 042690          151 QTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS-------------------DPKTLEKPV  211 (266)
Q Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-------------------~~~~~~~~~  211 (266)
                        .......+|+.|+|||++.+..++.++||||||+++|+|++|+.||....                   .......+.
T Consensus       188 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  265 (327)
T 3lm5_A          188 --CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLAT  265 (327)
T ss_dssp             --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred             --cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHH
Confidence              22334568999999999998899999999999999999999999986521                   123456688


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHH
Q 042690          212 MIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       212 ~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                      +++.+||+.||.+||+++++++.
T Consensus       266 ~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          266 DFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHcCCChhhCcCHHHHhCC
Confidence            99999999999999999999753


No 211
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=3e-35  Score=249.23  Aligned_cols=207  Identities=17%  Similarity=0.212  Sum_probs=167.9

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhh---cCCCceeeeeeEEE-----e
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHV---AHHKNLVCLLGYHI-----E   79 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~---~~h~~iv~~~~~~~-----~   79 (266)
                      .+|.+.+.||+|+||.||+|.+...++..||+|++.                .+++.   ++||||+++++++.     .
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~   90 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   90 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence            579999999999999999999854578889999763                23343   48999999999987     4


Q ss_pred             CCeEEEEEEcCCCCCHHHHHhhcCC--CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCccee
Q 042690           80 QECRLLVYKFMHNRSISSLLYECLR--PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKL  146 (266)
Q Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~--~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~  146 (266)
                      ....++||||+. ++|.+++.....  +.      +..++..++.++|..+++|+     ||+++.++.++|+|||++..
T Consensus        91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~  169 (326)
T 1blx_A           91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI  169 (326)
T ss_dssp             EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred             CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccccc
Confidence            557899999998 599999976432  33      44566667788888888877     89999999999999999986


Q ss_pred             eccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------------
Q 042690          147 LMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------------  203 (266)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------------  203 (266)
                      ...  ........++..|+|||.+.+..++.++||||||+++|+|++|+.||.....                       
T Consensus       170 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  247 (326)
T 1blx_A          170 YSF--QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV  247 (326)
T ss_dssp             CCG--GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTC
T ss_pred             ccC--CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcccc
Confidence            542  2233346689999999999888899999999999999999999999865211                       


Q ss_pred             -------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 -------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 -------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                         +.....+.+++.+||+.||.+||++.++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             SSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                               123445678999999999999999999984


No 212
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=5e-36  Score=251.30  Aligned_cols=212  Identities=16%  Similarity=0.197  Sum_probs=161.7

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      -...+|.+.+.||+|+||.||+|.+. .++..||+|.+.               ..++.++||||+++++++...+..++
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   90 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCA-PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL   90 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC-----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEEC-CCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence            34678999999999999999999965 567889999663               25567789999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhh--------cCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCccee
Q 042690           86 VYKFMHNRSISSLLYE--------CLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKL  146 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~--------~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~  146 (266)
                      ||||+++++|.+++..        ...++      +..++..++.++|..+++|+     ||+++.++.++|+|||++..
T Consensus        91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  170 (303)
T 2vwi_A           91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF  170 (303)
T ss_dssp             EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred             EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence            9999999999999974        12233      44566677788888888877     89999999999999999876


Q ss_pred             eccccc----cccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCC-------------------
Q 042690          147 LMINQT----QTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGS-------------------  202 (266)
Q Consensus       147 ~~~~~~----~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-------------------  202 (266)
                      ......    .......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||....                   
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  250 (303)
T 2vwi_A          171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG  250 (303)
T ss_dssp             CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-
T ss_pred             eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccc
Confidence            532211    11233568999999998765 457899999999999999999999986511                   


Q ss_pred             ------CccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          203 ------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       203 ------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                            .......+.+++.+||+.||.+||+++++++
T Consensus       251 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             ----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence                  1123456788999999999999999999985


No 213
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=2.1e-35  Score=259.62  Aligned_cols=203  Identities=15%  Similarity=0.197  Sum_probs=166.4

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhc------CCCceeeeeeEEEeCCeEEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVA------HHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~------~h~~iv~~~~~~~~~~~~~l   85 (266)
                      +|.+.+.||+|+||.||+|.+. .++..||+|++.             .+++.+      .|+||+++++++...+..++
T Consensus        98 ry~~~~~LG~G~fg~V~~a~~~-~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  176 (429)
T 3kvw_A           98 RYEVLKVIGKGSFGQVVKAYDH-KVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM  176 (429)
T ss_dssp             TEEEEEEEEESSSEEEEEEEET-TTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred             cEEEEEEcccCccEEEEEEEEC-CCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence            5999999999999999999976 678899999874             133433      67899999999999999999


Q ss_pred             EEEcCCCCCHHHHHhhcCC--CC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCE--EEEeecCcceeeccc
Q 042690           86 VYKFMHNRSISSLLYECLR--PT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFT--VETSDLGLAKLLMIN  150 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~--~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~--~~l~Dfg~a~~~~~~  150 (266)
                      ||||+. ++|.+++.....  ++      +..++..++.++|..+++|+     |||++.++.  +||+|||++....  
T Consensus       177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~--  253 (429)
T 3kvw_A          177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--  253 (429)
T ss_dssp             EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT--
T ss_pred             EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC--
Confidence            999996 599999976532  33      45566677788887777776     999999987  9999999997643  


Q ss_pred             cccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCCc--------------------------
Q 042690          151 QTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDP--------------------------  204 (266)
Q Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~--------------------------  204 (266)
                        .......+|+.|+|||++.+..++.++|||||||++|+|+||..||......                          
T Consensus       254 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~  331 (429)
T 3kvw_A          254 --QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKN  331 (429)
T ss_dssp             --CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHH
T ss_pred             --CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhh
Confidence              2233457899999999999888999999999999999999999998652210                          


Q ss_pred             ------------------------------------------------cccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          205 ------------------------------------------------KTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       205 ------------------------------------------------~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                                                      .....+.+++.+||+.||.+|||++|+++
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~  408 (429)
T 3kvw_A          332 FVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR  408 (429)
T ss_dssp             HBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence                                                            01345679999999999999999999986


No 214
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=2.8e-35  Score=253.52  Aligned_cols=208  Identities=19%  Similarity=0.229  Sum_probs=169.2

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeC-----CeE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQ-----ECR   83 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~-----~~~   83 (266)
                      .+|.+.+.||+|+||.||+|.+. .++..||+|++.               ++++.++||||+++++++...     ...
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDN-LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             ccEEEEEEeecCCCeEEEEEEEC-CCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            47999999999999999999975 678889999763               377889999999999998765     368


Q ss_pred             EEEEEcCCCCCHHHHHhhcCC-----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLR-----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~-----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      ++||||+.+ +|.+++....-     ..+..++..++.++|..+++|+     ||+++.++.++|+|||++.........
T Consensus       106 ~iv~e~~~~-~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~  184 (364)
T 3qyz_A          106 YIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH  184 (364)
T ss_dssp             EEEEECCSE-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB
T ss_pred             EEEEcccCc-CHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCc
Confidence            999999975 99999875321     2345667777788888888877     999999999999999999876432222


Q ss_pred             --ccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCC---------------------------
Q 042690          154 --TLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSD---------------------------  203 (266)
Q Consensus       154 --~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~---------------------------  203 (266)
                        ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||.....                           
T Consensus       185 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  264 (364)
T 3qyz_A          185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA  264 (364)
T ss_dssp             CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHH
T ss_pred             cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhH
Confidence              1234578999999997654 4589999999999999999999999965321                           


Q ss_pred             -------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 -------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 -------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                         +.....+.+++.+||+.||.+||+++++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                               223456789999999999999999999985


No 215
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=5.7e-36  Score=258.52  Aligned_cols=205  Identities=8%  Similarity=-0.067  Sum_probs=155.7

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH-----------------Hhhhc--CCCceeeee-------eE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK-----------------VVHVA--HHKNLVCLL-------GY   76 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~-----------------~l~~~--~h~~iv~~~-------~~   76 (266)
                      ..+|.+.+.||+|+||.||+|.+. .+++.||+|++..                 +++.+  +||||++++       ++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDV-ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEEC-CCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehh
Confidence            345999999999999999999986 6788999997651                 13333  699987754       55


Q ss_pred             EEeC-----------------CeEEEEEEcCCCCCHHHHHhhcCC---C----------CHHHHHHHHHHHhhhcCcccc
Q 042690           77 HIEQ-----------------ECRLLVYKFMHNRSISSLLYECLR---P----------TWQQRMQDCIRDCWRTRALAC  126 (266)
Q Consensus        77 ~~~~-----------------~~~~lv~e~~~~~~L~~~l~~~~~---~----------~~~~~l~~~~~~~~~~~~~h~  126 (266)
                      +..+                 ...++||||++ ++|.+++.....   .          .+..++..++.++|.++++|+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHr  218 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHG  218 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccC
Confidence            5443                 23799999998 799999985311   1          222677777888888888887


Q ss_pred             -----ceeecCCCEEEEeecCcceeeccccccccccccCCCCcCCccccCC--CCCCcccchhhHHHHHHHHHhCCCccc
Q 042690          127 -----RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRN--MPVTVKVDVYSFGVMLLEIISCRCVER  199 (266)
Q Consensus       127 -----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~i~~~l~tg~~p~~  199 (266)
                           |||++.++.+||+|||+++....    ......+++.|+|||++.+  ..++.++|||||||++|+|+||+.||.
T Consensus       219 Dikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~  294 (371)
T 3q60_A          219 HFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG  294 (371)
T ss_dssp             TCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred             cCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence                 99999999999999999986532    1113456799999999987  678999999999999999999999997


Q ss_pred             CCCC------------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          200 QGSD------------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       200 ~~~~------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      ...+                        +.....+.+++.+||+.||.+||++.++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             BCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            6411                        234567889999999999999999999874


No 216
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=2.9e-35  Score=249.22  Aligned_cols=206  Identities=15%  Similarity=0.183  Sum_probs=167.5

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------------HHhhhcCCCceeeeeeEEEeCC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------------KVVHVAHHKNLVCLLGYHIEQE   81 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------------~~l~~~~h~~iv~~~~~~~~~~   81 (266)
                      ++|.+.+.||+|+||.||+|.+. .++..||+|.+.                      ++++.++||||+++++++..+.
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFER-KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hceeEeeEEecCCCEEEEEEEEc-CCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            37999999999999999999976 678889999642                      3788899999999999987655


Q ss_pred             eEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCE---EEEeecCcceee
Q 042690           82 CRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFT---VETSDLGLAKLL  147 (266)
Q Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~---~~l~Dfg~a~~~  147 (266)
                       .++||||+++++|.+++.....+.      +..++..++.++|.++++|+     ||+++.++.   ++|+|||++...
T Consensus        89 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  167 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL  167 (322)
T ss_dssp             -EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred             -eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence             899999999999999998765554      34566667788888888776     899987664   999999999875


Q ss_pred             ccccccccccccCCCCcCCccccC---CCCCCcccchhhHHHHHHHHHhCCCcccCCCC--------------------c
Q 042690          148 MINQTQTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSFGVMLLEIISCRCVERQGSD--------------------P  204 (266)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~--------------------~  204 (266)
                      ...  .......+++.|+|||++.   +..++.++||||||+++|+|++|..||.....                    .
T Consensus       168 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (322)
T 2ycf_A          168 GET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA  245 (322)
T ss_dssp             CCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHT
T ss_pred             ccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhh
Confidence            422  1222345899999999863   55688999999999999999999999965321                    1


Q ss_pred             cccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          205 KTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       205 ~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      .....+.+++.+||+.||.+||+++++++
T Consensus       246 ~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          246 EVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            23556788999999999999999999874


No 217
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.8e-35  Score=259.49  Aligned_cols=205  Identities=18%  Similarity=0.210  Sum_probs=164.9

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------HHhhhcCCCceeeeeeEEEeC------CeEEEEEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------KVVHVAHHKNLVCLLGYHIEQ------ECRLLVYK   88 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------~~l~~~~h~~iv~~~~~~~~~------~~~~lv~e   88 (266)
                      .|.+.+.||+|+||.||+|.+. .++..||||++.          ++++.++||||+++++++...      ..+++|||
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e  133 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD  133 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEEC-CCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence            6999999999999999999986 568899999753          588999999999999998542      13679999


Q ss_pred             cCCCCCHHHHHhh----cCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCC-CEEEEeecCcceeeccccc
Q 042690           89 FMHNRSISSLLYE----CLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDY-FTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        89 ~~~~~~L~~~l~~----~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~-~~~~l~Dfg~a~~~~~~~~  152 (266)
                      |+.+ +|.+.+..    ...+.      +..++..++.++|.++++|+     |||++.+ +.+||+|||+++.....  
T Consensus       134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~--  210 (420)
T 1j1b_A          134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG--  210 (420)
T ss_dssp             CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT--
T ss_pred             cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccC--
Confidence            9986 77766653    23333      45567777788888888887     9999955 68899999999875422  


Q ss_pred             cccccccCCCCcCCccccCCC-CCCcccchhhHHHHHHHHHhCCCcccCCCC----------------------------
Q 042690          153 QTLTGMRETKGYLPPEWFRNM-PVTVKVDVYSFGVMLLEIISCRCVERQGSD----------------------------  203 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~i~~~l~tg~~p~~~~~~----------------------------  203 (266)
                      .......+|+.|+|||++.+. .++.++|||||||++|||++|+.||.....                            
T Consensus       211 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~  290 (420)
T 1j1b_A          211 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE  290 (420)
T ss_dssp             CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCC
T ss_pred             CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhh
Confidence            223346789999999988764 689999999999999999999999975221                            


Q ss_pred             ----------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ----------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ----------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                      +.....+.+++.+||+.||.+||++.++++
T Consensus       291 ~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          291 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             CCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence                            123457889999999999999999999985


No 218
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=1.3e-35  Score=253.15  Aligned_cols=208  Identities=15%  Similarity=0.177  Sum_probs=168.4

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH----------------HhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK----------------VVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~----------------~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      ...+|.+.+.||+|+||.||+|.+. .+++.||+|++..                .++.++||||+++++++..++..++
T Consensus        49 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l  127 (340)
T 3an0_A           49 KADDLEPIMELGRGAYGVVEKMRHV-PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI  127 (340)
T ss_dssp             CSSCEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred             ehhheeEeeEecccCCEEEEEEEEc-CCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence            3567999999999999999999975 5788999998741                3667889999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhh----cCCCC------HHHHHHHHHHHhhhc-Ccccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           86 VYKFMHNRSISSLLYE----CLRPT------WQQRMQDCIRDCWRT-RALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~----~~~~~------~~~~l~~~~~~~~~~-~~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                      ||||+.+ +|.+++..    ...+.      +..++..++.++|.. +++|+     ||+++.++.++|+|||++.....
T Consensus       128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  206 (340)
T 3an0_A          128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD  206 (340)
T ss_dssp             EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred             EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence            9999986 99988864    23343      445566666777765 77776     99999999999999999976532


Q ss_pred             ccccccccccCCCCcCCccccC----CCCCCcccchhhHHHHHHHHHhCCCcccCCC------------------Ccccc
Q 042690          150 NQTQTLTGMRETKGYLPPEWFR----NMPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------DPKTL  207 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------~~~~~  207 (266)
                        ........||+.|+|||++.    +..++.++||||||+++|+|+||+.||....                  .....
T Consensus       207 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (340)
T 3an0_A          207 --SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS  284 (340)
T ss_dssp             --HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGGSC
T ss_pred             --ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCcccCC
Confidence              11222346899999999864    3468899999999999999999999996411                  12245


Q ss_pred             chHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          208 EKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       208 ~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      ..+.+++.+||+.||.+||++.++++
T Consensus       285 ~~~~~li~~~l~~dp~~Rps~~ell~  310 (340)
T 3an0_A          285 AEFVDFTSQCLKKNSKERPTYPELMQ  310 (340)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHhc
Confidence            67889999999999999999999986


No 219
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=9.7e-35  Score=245.97  Aligned_cols=207  Identities=17%  Similarity=0.278  Sum_probs=172.1

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------------HHhhhcC--CCceeeeeeEEEeC
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------------KVVHVAH--HKNLVCLLGYHIEQ   80 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------------~~l~~~~--h~~iv~~~~~~~~~   80 (266)
                      .++|.+.+.||+|+||.||+|.+. .++..||+|.+.                    .+++.++  ||||+++++++..+
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           42 ESQYQVGPLLGSGGFGSVYSGIRV-SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             TTTEEEEEECSSSSSCEEEEEEET-TTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             cCceEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            457999999999999999999976 678899999753                    3666775  59999999999999


Q ss_pred             CeEEEEEEcCCC-CCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeec-CCCEEEEeecCcceee
Q 042690           81 ECRLLVYKFMHN-RSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLH-DYFTVETSDLGLAKLL  147 (266)
Q Consensus        81 ~~~~lv~e~~~~-~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~-~~~~~~l~Dfg~a~~~  147 (266)
                      +..++|||++.+ ++|.+++.....+.      +..++..++.++|..+++|+     ||+++ +++.++|+|||++...
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~  200 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL  200 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccc
Confidence            999999999986 89999998766554      44566667788887777776     89999 7899999999999875


Q ss_pred             ccccccccccccCCCCcCCccccCCCCC-CcccchhhHHHHHHHHHhCCCcccC---------CCCccccchHHHHHHHh
Q 042690          148 MINQTQTLTGMRETKGYLPPEWFRNMPV-TVKVDVYSFGVMLLEIISCRCVERQ---------GSDPKTLEKPVMIAIQF  217 (266)
Q Consensus       148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~i~~~l~tg~~p~~~---------~~~~~~~~~~~~l~~~c  217 (266)
                      ..   .......+|+.|+|||++.+..+ +.++||||||+++|+|++|+.||..         .........+.+++.+|
T Consensus       201 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~li~~~  277 (320)
T 3a99_A          201 KD---TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC  277 (320)
T ss_dssp             CS---SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHHHHHHH
T ss_pred             cc---ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHHHHHHHHH
Confidence            42   22234568999999998876665 6789999999999999999999865         22345567889999999


Q ss_pred             hhcCCCCCCCHHHHHH
Q 042690          218 VKEKPPLRPSLRIVAL  233 (266)
Q Consensus       218 l~~~p~~Rps~~~il~  233 (266)
                      |+.||.+||+++++++
T Consensus       278 l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          278 LALRPSDRPTFEEIQN  293 (320)
T ss_dssp             TCSSGGGSCCHHHHHT
T ss_pred             ccCChhhCcCHHHHhc
Confidence            9999999999999976


No 220
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=8e-35  Score=244.41  Aligned_cols=210  Identities=19%  Similarity=0.168  Sum_probs=166.6

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------------HHhhhcCCCceeeeeeEEE--eCCe
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------------KVVHVAHHKNLVCLLGYHI--EQEC   82 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------------~~l~~~~h~~iv~~~~~~~--~~~~   82 (266)
                      .++|.+.+.||+|+||.||++.+. .++..+|+|.+.                  .+++.++||||+++++++.  ....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDS-ETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBT-TTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             ccceeEeeEEecCCCeEEEEEEEC-CCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            357999999999999999999975 677889998763                  3677889999999999985  3457


Q ss_pred             EEEEEEcCCCCCHHHHHhhcC--CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           83 RLLVYKFMHNRSISSLLYECL--RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        83 ~~lv~e~~~~~~L~~~l~~~~--~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                      .++||||+.++ |.+++....  .+.      +..++..++.++|..+++|+     ||+++.++.++|+|||++.....
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            89999999875 777776532  233      44566677788888888877     89999999999999999987542


Q ss_pred             cc-ccccccccCCCCcCCccccCCCC--CCcccchhhHHHHHHHHHhCCCcccCC---------------CCccccchHH
Q 042690          150 NQ-TQTLTGMRETKGYLPPEWFRNMP--VTVKVDVYSFGVMLLEIISCRCVERQG---------------SDPKTLEKPV  211 (266)
Q Consensus       150 ~~-~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~i~~~l~tg~~p~~~~---------------~~~~~~~~~~  211 (266)
                      .. ........++..|+|||++.+..  .+.++||||||+++|+|++|+.||...               .+......+.
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~l~  241 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS  241 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSCHHHH
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCccCHHHH
Confidence            21 22223456899999999887644  377999999999999999999999752               2334556788


Q ss_pred             HHHHHhhhcCCCCCCCHHHHHHH
Q 042690          212 MIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       212 ~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                      +++.+||+.||.+||+++++++.
T Consensus       242 ~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          242 DLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHccCChhhCCCHHHHhcC
Confidence            99999999999999999999864


No 221
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=2.2e-35  Score=251.59  Aligned_cols=216  Identities=16%  Similarity=0.149  Sum_probs=154.7

Q ss_pred             Cceeeee-ccCCCcceEEEEEEEcCCCcceeeeeeHH----------HHhhhcCCCceeeeeeEEEe----CCeEEEEEE
Q 042690           24 SHIYSLK-KPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------KVVHVAHHKNLVCLLGYHIE----QECRLLVYK   88 (266)
Q Consensus        24 ~~~~~~~-~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------~~l~~~~h~~iv~~~~~~~~----~~~~~lv~e   88 (266)
                      ++|.+.+ .||+|+||.||+|.++ .+++.||+|++.          ..++.++||||+++++++..    ....++|||
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e  106 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHR-RTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME  106 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEEC-CCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence            4788865 5999999999999986 678899999864          25667789999999999876    445899999


Q ss_pred             cCCCCCHHHHHhhcC--CCC------HHHHHHHHHHHhhhcCcccc-----ceeecC---CCEEEEeecCcceeeccccc
Q 042690           89 FMHNRSISSLLYECL--RPT------WQQRMQDCIRDCWRTRALAC-----RILLHD---YFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        89 ~~~~~~L~~~l~~~~--~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~---~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      |+++++|.+++....  .++      +..++..++.++|..+++|+     ||+++.   ++.++|+|||++.....   
T Consensus       107 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~---  183 (336)
T 3fhr_A          107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ---  183 (336)
T ss_dssp             CCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-----
T ss_pred             ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc---
Confidence            999999999998653  233      44566667788888887776     899986   45699999999986542   


Q ss_pred             cccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------------ccccch
Q 042690          153 QTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------------PKTLEK  209 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------------~~~~~~  209 (266)
                      .......+|+.|+|||.+.+..++.++||||||+++|+|++|..||.....                       ......
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (336)
T 3fhr_A          184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED  263 (336)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHH
T ss_pred             cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHH
Confidence            222345679999999999888899999999999999999999999855211                       234567


Q ss_pred             HHHHHHHhhhcCCCCCCCHHHHHH--HHHHHHhCCC
Q 042690          210 PVMIAIQFVKEKPPLRPSLRIVAL--MLQSILEVPS  243 (266)
Q Consensus       210 ~~~l~~~cl~~~p~~Rps~~~il~--~l~~~~~~~~  243 (266)
                      +.+++.+||+.||.+||+++++++  .+......+.
T Consensus       264 ~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~  299 (336)
T 3fhr_A          264 AKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ  299 (336)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSCC
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhcCccccccccCCC
Confidence            889999999999999999999996  4554444343


No 222
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=2.8e-35  Score=256.20  Aligned_cols=205  Identities=17%  Similarity=0.222  Sum_probs=163.5

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------HHhhhcCCCceeeeeeEEEeCCe------EEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------KVVHVAHHKNLVCLLGYHIEQEC------RLLVY   87 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------~~l~~~~h~~iv~~~~~~~~~~~------~~lv~   87 (266)
                      .+|.+.+.||+|+||.||+|.+.  ....+|+|++.          ++++.++||||+++++++...+.      .++||
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~--~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~  117 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLV--ESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL  117 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEET--TTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEEC--CCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence            36999999999999999999985  34448887653          58899999999999999965443      78999


Q ss_pred             EcCCCCCHHHHHhh----cCCC------CHHHHHHHHHHHhhhcCcccc-----ceeec-CCCEEEEeecCcceeecccc
Q 042690           88 KFMHNRSISSLLYE----CLRP------TWQQRMQDCIRDCWRTRALAC-----RILLH-DYFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        88 e~~~~~~L~~~l~~----~~~~------~~~~~l~~~~~~~~~~~~~h~-----nili~-~~~~~~l~Dfg~a~~~~~~~  151 (266)
                      ||+.+ ++.+.+..    ...+      .+..++..++.++|..+++|+     ||+++ .++.+||+|||+++..... 
T Consensus       118 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~-  195 (394)
T 4e7w_A          118 EYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG-  195 (394)
T ss_dssp             ECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT-
T ss_pred             eccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC-
Confidence            99987 55444432    2333      345577777888888888887     99999 7999999999999876422 


Q ss_pred             ccccccccCCCCcCCccccCCC-CCCcccchhhHHHHHHHHHhCCCcccCCCC---------------------------
Q 042690          152 TQTLTGMRETKGYLPPEWFRNM-PVTVKVDVYSFGVMLLEIISCRCVERQGSD---------------------------  203 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~i~~~l~tg~~p~~~~~~---------------------------  203 (266)
                       .......+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.....                           
T Consensus       196 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~  274 (394)
T 4e7w_A          196 -EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM  274 (394)
T ss_dssp             -CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred             -CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence             233356789999999988765 489999999999999999999999976321                           


Q ss_pred             -----------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 -----------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 -----------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                       +.....+.+++.+||+.||.+||++.++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence                             124457889999999999999999999985


No 223
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=1.4e-35  Score=255.66  Aligned_cols=205  Identities=17%  Similarity=0.216  Sum_probs=151.8

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeC------
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQ------   80 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~------   80 (266)
                      .++|.+.+.||+|+||.||+|.+. .++..||+|++.                .+++.++||||+++++++...      
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDT-KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEET-TTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCceEEeeEEeecCCeEEEEEEEC-CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            368999999999999999999975 678899999863                377889999999999998654      


Q ss_pred             CeEEEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           81 ECRLLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                      ...++|||++ +++|.+++.. ..++      +..++..++.++|..+++|+     ||+++.++.+||+|||+++....
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~  184 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD  184 (367)
T ss_dssp             CCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred             CeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence            4579999999 6799998865 3333      45667777788888888887     99999999999999999986432


Q ss_pred             ccccccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------------
Q 042690          150 NQTQTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------------  203 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------------  203 (266)
                          ......+|..|+|||++.+ ..++.++|||||||++|+|++|+.||.+...                         
T Consensus       185 ----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~  260 (367)
T 2fst_X          185 ----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE  260 (367)
T ss_dssp             ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred             ----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence                2234568999999998876 6789999999999999999999999975221                         


Q ss_pred             ---------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          204 ---------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       204 ---------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                                           +.....+.+++.+||+.||.+|||++++++.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence                                 1123457889999999999999999999853


No 224
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=3.6e-35  Score=249.10  Aligned_cols=208  Identities=15%  Similarity=0.171  Sum_probs=149.5

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH----------------HhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK----------------VVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~----------------~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      ..++|.+.+.||+|+||.||+|.+. .+++.||+|++..                +++.++||||+++++++..++..++
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l   98 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHK-PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI   98 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEET-TTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred             CHHHhhehheeccCCCEEEEEEEEc-CCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence            4578999999999999999999985 5788999997641                4566789999999999999999999


Q ss_pred             EEEcCCCCCHHHHHhh-----cCCCC------HHHHHHHHHHHhhhc-Ccccc-----ceeecCCCEEEEeecCcceeec
Q 042690           86 VYKFMHNRSISSLLYE-----CLRPT------WQQRMQDCIRDCWRT-RALAC-----RILLHDYFTVETSDLGLAKLLM  148 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~-----~~~~~------~~~~l~~~~~~~~~~-~~~h~-----nili~~~~~~~l~Dfg~a~~~~  148 (266)
                      ||||+.+ +|.+++..     ...+.      +..++..++.++|.. +++|+     ||+++.++.+||+|||++....
T Consensus        99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  177 (327)
T 3aln_A           99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV  177 (327)
T ss_dssp             EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred             EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence            9999986 88888763     23333      344555556677766 66666     9999999999999999998754


Q ss_pred             cccccccccccCCCCcCCcccc----CCCCCCcccchhhHHHHHHHHHhCCCcccCCC---------------------C
Q 042690          149 INQTQTLTGMRETKGYLPPEWF----RNMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------------D  203 (266)
Q Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------------~  203 (266)
                      ..  .......++..|+|||++    .+..++.++||||||+++|+|++|+.||....                     .
T Consensus       178 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (327)
T 3aln_A          178 DS--IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEE  255 (327)
T ss_dssp             ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSS
T ss_pred             cc--cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCccc
Confidence            22  222234689999999988    45568899999999999999999999986511                     0


Q ss_pred             ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      ......+.+++.+||+.||.+||+++++++
T Consensus       256 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          256 REFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            124567889999999999999999999874


No 225
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=5.4e-35  Score=252.46  Aligned_cols=205  Identities=16%  Similarity=0.236  Sum_probs=165.3

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeE----
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECR----   83 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~----   83 (266)
                      .+|.+.+.||+|+||.||+|.+. .++..||+|++.                .+++.++||||+++++++...+..    
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDK-RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEEC-CCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            57999999999999999999976 678899999764                367889999999999999876654    


Q ss_pred             --EEEEEcCCCCCHHHHHhhcCC----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           84 --LLVYKFMHNRSISSLLYECLR----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        84 --~lv~e~~~~~~L~~~l~~~~~----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                        ++||||+. ++|.+++...-.    ..+..++..++.++|..+++|+     ||+++.++.++|+|||++.....   
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~---  196 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA---  196 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------
T ss_pred             eEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccccc---
Confidence              99999997 489888753311    3345667777788888888887     99999999999999999986532   


Q ss_pred             cccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCC-----------------------------
Q 042690          153 QTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGS-----------------------------  202 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-----------------------------  202 (266)
                       ......+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||....                             
T Consensus       197 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  275 (371)
T 4exu_A          197 -EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK  275 (371)
T ss_dssp             ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred             -CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence             2234567999999998876 678999999999999999999999997522                             


Q ss_pred             -----------------CccccchHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          203 -----------------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       203 -----------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                                       .+.....+.+++.+||+.||.+||+++++++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence                             01235677899999999999999999999853


No 226
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=2.3e-35  Score=253.29  Aligned_cols=216  Identities=17%  Similarity=0.204  Sum_probs=158.3

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEeCCe-----
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIEQEC-----   82 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~~~~-----   82 (266)
                      ..+++|.+.+.||+|+||.||+|.+. .++..||+|++.             +.++.++||||+++++++...+.     
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~   98 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEK-STGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD   98 (360)
T ss_dssp             HHHTTEEEC----------CEEEEET-TTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred             hhccceEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence            45678999999999999999999986 678899999764             24567799999999999976433     


Q ss_pred             --EEEEEEcCCCCCHHHHHh----hcCCCC------HHHHHHHHHHHhh--hcCcccc-----ceeecC-CCEEEEeecC
Q 042690           83 --RLLVYKFMHNRSISSLLY----ECLRPT------WQQRMQDCIRDCW--RTRALAC-----RILLHD-YFTVETSDLG  142 (266)
Q Consensus        83 --~~lv~e~~~~~~L~~~l~----~~~~~~------~~~~l~~~~~~~~--~~~~~h~-----nili~~-~~~~~l~Dfg  142 (266)
                        .++||||+.+ +|.+.+.    ....+.      +..++..++.++|  ..+++|+     ||+++. ++.++|+|||
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg  177 (360)
T 3e3p_A           99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG  177 (360)
T ss_dssp             EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred             eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence              7899999987 6655544    222332      4456666678888  7777776     999997 8999999999


Q ss_pred             cceeeccccccccccccCCCCcCCccccCCCC-CCcccchhhHHHHHHHHHhCCCcccCCCCc-----------------
Q 042690          143 LAKLLMINQTQTLTGMRETKGYLPPEWFRNMP-VTVKVDVYSFGVMLLEIISCRCVERQGSDP-----------------  204 (266)
Q Consensus       143 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~i~~~l~tg~~p~~~~~~~-----------------  204 (266)
                      ++......  .......+|+.|+|||++.+.. ++.++||||||+++|+|++|+.||......                 
T Consensus       178 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  255 (360)
T 3e3p_A          178 SAKKLSPS--EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREV  255 (360)
T ss_dssp             TCBCCCTT--SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred             CceecCCC--CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHH
Confidence            99876422  2333456899999999886544 899999999999999999999999752210                 


Q ss_pred             ------------------------------cccchHHHHHHHhhhcCCCCCCCHHHHHHH--HHHHHh
Q 042690          205 ------------------------------KTLEKPVMIAIQFVKEKPPLRPSLRIVALM--LQSILE  240 (266)
Q Consensus       205 ------------------------------~~~~~~~~l~~~cl~~~p~~Rps~~~il~~--l~~~~~  240 (266)
                                                    .....+.+++.+||+.||.+||++.++++.  ++....
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          256 LRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             HHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred             HHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence                                          023567899999999999999999999853  554433


No 227
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=3.8e-35  Score=250.89  Aligned_cols=205  Identities=17%  Similarity=0.229  Sum_probs=170.7

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------------------------HHhhhcCCCcee
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------------------------KVVHVAHHKNLV   71 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------------------------~~l~~~~h~~iv   71 (266)
                      .++|.+.+.||+|+||.||+|.+   ++..||+|.+.                               .+++.++||||+
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~  106 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK---DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL  106 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE---TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc---CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc
Confidence            46899999999999999999997   78899998642                               367788999999


Q ss_pred             eeeeEEEeCCeEEEEEEcCCCCCHHHH------Hhh--cCCCC------HHHHHHHHHHHhhh-cCcccc-----ceeec
Q 042690           72 CLLGYHIEQECRLLVYKFMHNRSISSL------LYE--CLRPT------WQQRMQDCIRDCWR-TRALAC-----RILLH  131 (266)
Q Consensus        72 ~~~~~~~~~~~~~lv~e~~~~~~L~~~------l~~--~~~~~------~~~~l~~~~~~~~~-~~~~h~-----nili~  131 (266)
                      ++++++.+.+..++||||+++++|.++      +..  ...++      +..++..++.++|. .+++|+     ||+++
T Consensus       107 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~  186 (348)
T 2pml_X          107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD  186 (348)
T ss_dssp             CCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEEC
T ss_pred             eEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEc
Confidence            999999999999999999999999998      554  23333      44556666788887 777777     89999


Q ss_pred             CCCEEEEeecCcceeeccccccccccccCCCCcCCccccCCC-CCCc-ccchhhHHHHHHHHHhCCCcccCCCC------
Q 042690          132 DYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNM-PVTV-KVDVYSFGVMLLEIISCRCVERQGSD------  203 (266)
Q Consensus       132 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~Di~slG~i~~~l~tg~~p~~~~~~------  203 (266)
                      .++.++|+|||++......   ......++..|+|||.+.+. .++. ++||||||+++|+|++|+.||.....      
T Consensus       187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  263 (348)
T 2pml_X          187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN  263 (348)
T ss_dssp             TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHH
T ss_pred             CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Confidence            9999999999999875422   33446689999999998876 5666 99999999999999999999965322      


Q ss_pred             -----------------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 -----------------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 -----------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                                   ......+.+++.+||+.||.+||+++++++
T Consensus       264 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                                         345567889999999999999999999876


No 228
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=7.7e-35  Score=243.81  Aligned_cols=209  Identities=18%  Similarity=0.248  Sum_probs=160.1

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCceeeeeeEEEe-----------
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKNLVCLLGYHIE-----------   79 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~iv~~~~~~~~-----------   79 (266)
                      ++|.+.+.||+|+||.||+|.+. .++..||+|.+.             .+++.++||||+++++++..           
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNA-LDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEc-CCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            47899999999999999999975 578899999764             36778899999999998865           


Q ss_pred             --CCeEEEEEEcCCCCCHHHHHhhcCC-C------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcce
Q 042690           80 --QECRLLVYKFMHNRSISSLLYECLR-P------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAK  145 (266)
Q Consensus        80 --~~~~~lv~e~~~~~~L~~~l~~~~~-~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~  145 (266)
                        .+..++||||+++++|.+++..... +      .+..++..++.++|..+++|+     ||+++.++.++|+|||++.
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  164 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK  164 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred             ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence              3568999999999999999975432 2      345667777788888888887     8999999999999999997


Q ss_pred             eecccc-------------ccccccccCCCCcCCccccCCC-CCCcccchhhHHHHHHHHHhCCCcccC-----------
Q 042690          146 LLMINQ-------------TQTLTGMRETKGYLPPEWFRNM-PVTVKVDVYSFGVMLLEIISCRCVERQ-----------  200 (266)
Q Consensus       146 ~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~i~~~l~tg~~p~~~-----------  200 (266)
                      ......             ........++..|+|||.+.+. .++.++||||||+++|+|+++..+...           
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~~~~~~~~~~~  244 (303)
T 1zy4_A          165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSV  244 (303)
T ss_dssp             CTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHST
T ss_pred             hcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhccCCchhHHHHHHhcccc
Confidence            653211             1122345689999999988754 688999999999999999983221100           


Q ss_pred             ------CCCccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          201 ------GSDPKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       201 ------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                            .........+.+++.+||+.||.+||+++++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          245 SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence                  112233445789999999999999999999986


No 229
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=6e-35  Score=248.20  Aligned_cols=205  Identities=16%  Similarity=0.154  Sum_probs=167.4

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCC------ceeeeeeEEEeCCeEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHK------NLVCLLGYHIEQECRL   84 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~------~iv~~~~~~~~~~~~~   84 (266)
                      ++|.+.+.||+|+||.||+|.+...++..||+|++.             .+++.++|+      +++++++++...+..+
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~   93 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC   93 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence            489999999999999999999855678899999764             245555544      5999999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcC--CCC------HHHHHHHHHHHhhhcCcccc-----ceeecC-------------------
Q 042690           85 LVYKFMHNRSISSLLYECL--RPT------WQQRMQDCIRDCWRTRALAC-----RILLHD-------------------  132 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~--~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~-------------------  132 (266)
                      +||||+ +++|.+++....  .++      +..++..++.++|.++++|+     ||+++.                   
T Consensus        94 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~  172 (339)
T 1z57_A           94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI  172 (339)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEES
T ss_pred             EEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccccccc
Confidence            999999 789999998654  233      44666777788888888877     899987                   


Q ss_pred             CCEEEEeecCcceeeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCCc--------
Q 042690          133 YFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDP--------  204 (266)
Q Consensus       133 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~--------  204 (266)
                      ++.++|+|||++.....    ......+|+.|+|||++.+..++.++||||||+++|+|++|..||......        
T Consensus       173 ~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  248 (339)
T 1z57_A          173 NPDIKVVDFGSATYDDE----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER  248 (339)
T ss_dssp             CCCEEECCCSSCEETTS----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHH
T ss_pred             CCCceEeeCcccccCcc----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            66799999999986432    223456899999999999888999999999999999999999999752211        


Q ss_pred             ---------------------------------------------------cccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          205 ---------------------------------------------------KTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       205 ---------------------------------------------------~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                                                         .....+.+++.+||+.||.+|||++++++
T Consensus       249 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence                                                               11245679999999999999999999875


No 230
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=5.6e-35  Score=255.12  Aligned_cols=208  Identities=16%  Similarity=0.214  Sum_probs=153.8

Q ss_pred             eee-eeccCCCcceEEEEEEEcC-CCcceeeeeeHH------------HHhhhcCCCceeeeeeEEEe--CCeEEEEEEc
Q 042690           26 IYS-LKKPCGGSFSTVYTGVLAP-GDKTNIGVKKLD------------KVVHVAHHKNLVCLLGYHIE--QECRLLVYKF   89 (266)
Q Consensus        26 ~~~-~~~ig~G~~g~V~~~~~~~-~~~~~vaiK~~~------------~~l~~~~h~~iv~~~~~~~~--~~~~~lv~e~   89 (266)
                      |.+ .++||+|+||.||+|.++. .++..||+|++.            .+++.++||||+++++++..  ....++||||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~  101 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY  101 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence            444 4579999999999999753 367889999764            48889999999999999965  5689999999


Q ss_pred             CCCCCHHHHHhhcC---------C------CCHHHHHHHHHHHhhhcCcccc-----ceee----cCCCEEEEeecCcce
Q 042690           90 MHNRSISSLLYECL---------R------PTWQQRMQDCIRDCWRTRALAC-----RILL----HDYFTVETSDLGLAK  145 (266)
Q Consensus        90 ~~~~~L~~~l~~~~---------~------~~~~~~l~~~~~~~~~~~~~h~-----nili----~~~~~~~l~Dfg~a~  145 (266)
                      +.+ +|.+++....         .      ..+..++..++.++|..+++|+     ||++    +.++.++|+|||++.
T Consensus       102 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  180 (405)
T 3rgf_A          102 AEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  180 (405)
T ss_dssp             CSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred             CCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence            975 8888876321         1      2345677778888998888887     8999    677899999999998


Q ss_pred             eeccccc--cccccccCCCCcCCccccCCC-CCCcccchhhHHHHHHHHHhCCCcccCCCCc------------------
Q 042690          146 LLMINQT--QTLTGMRETKGYLPPEWFRNM-PVTVKVDVYSFGVMLLEIISCRCVERQGSDP------------------  204 (266)
Q Consensus       146 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~------------------  204 (266)
                      .......  .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||......                  
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~  260 (405)
T 3rgf_A          181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV  260 (405)
T ss_dssp             ----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHH
T ss_pred             ecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHh
Confidence            7643211  223346789999999988774 4899999999999999999999999642210                  


Q ss_pred             --------------------------------------------cccchHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          205 --------------------------------------------KTLEKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       205 --------------------------------------------~~~~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                                                                  .....+.+++.+||+.||.+|||++++++.
T Consensus       261 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          261 MGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             HCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                                                        014567789999999999999999999863


No 231
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=7.9e-35  Score=245.68  Aligned_cols=208  Identities=17%  Similarity=0.234  Sum_probs=160.5

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCCceeeeeeEEE-----------
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHKNLVCLLGYHI-----------   78 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~~iv~~~~~~~-----------   78 (266)
                      ++|.+.+.||+|+||.||+|.+. .+++.||+|++.              ++++.++||||+++++++.           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDN-DCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEET-TTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CceeEEEEeccCCCeEEEEEEEC-CCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            58999999999999999999986 568899999653              3778899999999999873           


Q ss_pred             ---eCCeEEEEEEcCCCCCHHHHHhhcCC-----CCHHHHHHHHHHHhhhcCcccc-----ceeec-CCCEEEEeecCcc
Q 042690           79 ---EQECRLLVYKFMHNRSISSLLYECLR-----PTWQQRMQDCIRDCWRTRALAC-----RILLH-DYFTVETSDLGLA  144 (266)
Q Consensus        79 ---~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~l~~~~~~~~~~~~~h~-----nili~-~~~~~~l~Dfg~a  144 (266)
                         .....++||||+. ++|.+++....-     ..+..++..++.++|..+++|+     ||+++ .++.++|+|||++
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~  168 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA  168 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             cccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccc
Confidence               3467899999998 599999975321     2345566777788888888887     89997 5679999999999


Q ss_pred             eeeccccc--cccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCC------------------
Q 042690          145 KLLMINQT--QTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSD------------------  203 (266)
Q Consensus       145 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~------------------  203 (266)
                      ........  .......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.....                  
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  248 (320)
T 2i6l_A          169 RIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED  248 (320)
T ss_dssp             BCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHH
T ss_pred             cccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhh
Confidence            87542211  12233557889999997754 6789999999999999999999999975221                  


Q ss_pred             ---------------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ---------------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ---------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                                 +.....+.+++.+||+.||.+||+++++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          249 RQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence                                       124567889999999999999999999986


No 232
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=6.4e-35  Score=249.93  Aligned_cols=207  Identities=14%  Similarity=0.226  Sum_probs=166.8

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeC-----CeE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQ-----ECR   83 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~-----~~~   83 (266)
                      ++|.+.+.||+|+||.||+|.+. .++..||+|.+.               .+++.++||||+++++++...     ...
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHK-PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             cceEEeeEEcCCCCeEEEEEEEC-CCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            58999999999999999999985 578899999763               377889999999999987654     578


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCC------CHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLRP------TWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~------~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      ++||||+. ++|.+++... .+      .+..++..++.++|..+++|+     ||+++.++.++|+|||++........
T Consensus        90 ~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  167 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA  167 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred             EEEEeccC-ccHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccc
Confidence            99999997 4999998753 33      345667777788888888877     89999999999999999987542211


Q ss_pred             c---------ccccccCCCCcCCccccC-CCCCCcccchhhHHHHHHHHHhCCCcccCCCC-------------------
Q 042690          153 Q---------TLTGMRETKGYLPPEWFR-NMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-------------------  203 (266)
Q Consensus       153 ~---------~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-------------------  203 (266)
                      .         ......||+.|+|||++. +..++.++||||||+++|+|++|+.||.....                   
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T 2b9h_A          168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND  247 (353)
T ss_dssp             ------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTT
T ss_pred             cccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcc
Confidence            1         122346899999999765 46789999999999999999999999865220                   


Q ss_pred             ----------------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ----------------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ----------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                                  +.....+.+++.+||+.||.+||+++++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             TTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                                        134456778999999999999999999986


No 233
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=4e-35  Score=254.72  Aligned_cols=204  Identities=16%  Similarity=0.146  Sum_probs=162.8

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcC--------CCceeeeeeEEE----
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAH--------HKNLVCLLGYHI----   78 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~--------h~~iv~~~~~~~----   78 (266)
                      ++|.+.+.||+|+||+||+|.+. .+++.||+|++.             .+++.++        |+||+++++++.    
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDI-QGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CeEEEEEEeeecCCeeEEEEEec-CCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            57999999999999999999975 678899999764             2455553        888999999987    


Q ss_pred             eCCeEEEEEEcCCCCCHHHHHhhc--CCCC------HHHHHHHHHHHhhhc-Ccccc-----ceeecCCC----------
Q 042690           79 EQECRLLVYKFMHNRSISSLLYEC--LRPT------WQQRMQDCIRDCWRT-RALAC-----RILLHDYF----------  134 (266)
Q Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~------~~~~l~~~~~~~~~~-~~~h~-----nili~~~~----------  134 (266)
                      .....++||||+ +++|.+++...  ..+.      +..++..++.++|.+ +++|+     |||++.++          
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~  194 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA  194 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred             CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence            445789999999 45777766543  2233      445666777888877 77777     99999776          


Q ss_pred             ---------------------------------------EEEEeecCcceeeccccccccccccCCCCcCCccccCCCCC
Q 042690          135 ---------------------------------------TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPV  175 (266)
Q Consensus       135 ---------------------------------------~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  175 (266)
                                                             .++|+|||++.....    ......+|+.|+|||++.+..+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~  270 (397)
T 1wak_A          195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK----HFTEDIQTRQYRSLEVLIGSGY  270 (397)
T ss_dssp             C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB----CSCSCCSCGGGCCHHHHHTSCC
T ss_pred             HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc----cCccCCCCCcccCChhhcCCCC
Confidence                                                   799999999987532    2334568999999999998889


Q ss_pred             CcccchhhHHHHHHHHHhCCCcccCCCCc---------------------------------------------------
Q 042690          176 TVKVDVYSFGVMLLEIISCRCVERQGSDP---------------------------------------------------  204 (266)
Q Consensus       176 ~~~~Di~slG~i~~~l~tg~~p~~~~~~~---------------------------------------------------  204 (266)
                      +.++|||||||++|+|+||+.||......                                                   
T Consensus       271 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (397)
T 1wak_A          271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL  350 (397)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred             CcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence            99999999999999999999999642211                                                   


Q ss_pred             ------------cccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          205 ------------KTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       205 ------------~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                  .....+.+++.+||+.||.+|||++++++
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                        11234678999999999999999999985


No 234
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=7.7e-35  Score=250.41  Aligned_cols=208  Identities=17%  Similarity=0.198  Sum_probs=160.9

Q ss_pred             cccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeH-------------------------HHHhhhcCCCceeeeee
Q 042690           21 GSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKL-------------------------DKVVHVAHHKNLVCLLG   75 (266)
Q Consensus        21 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~-------------------------~~~l~~~~h~~iv~~~~   75 (266)
                      .-.+.|.+.+.||+|+||.||+|...  .+..||+|++                         ..+++.++||||+++++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   96 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDS--EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD   96 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECT--TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred             HhccceEEeEEeccCCCEEEEEEECC--CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceee
Confidence            33568999999999999999999974  5889999965                         14788899999999999


Q ss_pred             EEEeC-----CeEEEEEEcCCCCCHHHHHhhcC-CCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEE
Q 042690           76 YHIEQ-----ECRLLVYKFMHNRSISSLLYECL-RPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVET  138 (266)
Q Consensus        76 ~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~-~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l  138 (266)
                      ++...     ...++||||+. ++|.+++.... .++      +..++..++.++|..+++|+     ||+++.++.++|
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl  175 (362)
T 3pg1_A           97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI  175 (362)
T ss_dssp             EEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             eEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEE
Confidence            98542     36899999998 48888887543 333      45566777788888888887     899999999999


Q ss_pred             eecCcceeeccccccccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCCC--------------
Q 042690          139 SDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGSD--------------  203 (266)
Q Consensus       139 ~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~--------------  203 (266)
                      +|||++.....  ........+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||.....              
T Consensus       176 ~Dfg~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~  253 (362)
T 3pg1_A          176 CDFNLAREDTA--DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP  253 (362)
T ss_dssp             CCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             EecCccccccc--ccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence            99999975432  222334567899999998876 6689999999999999999999999975221              


Q ss_pred             ---------------------------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ---------------------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ---------------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                                       +.....+.+++.+||+.||.+|||++++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             CHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence                                             122455788999999999999999999986


No 235
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1.4e-34  Score=244.15  Aligned_cols=211  Identities=14%  Similarity=0.157  Sum_probs=153.0

Q ss_pred             HhcccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCe
Q 042690           19 VFGSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQEC   82 (266)
Q Consensus        19 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~   82 (266)
                      +...+.+|.+.+.||+|+||.||+|.+. .++..||+|.+.                .+++.++||||+++++++..++.
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~   98 (318)
T 2dyl_A           20 YQAEINDLENLGEMGSGTCGQVWKMRFR-KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD   98 (318)
T ss_dssp             EECCGGGEEEEEEC------CEEEEEET-TTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             hhhhhccccccceeeecCCeeEEEEEEe-cCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCc
Confidence            3345778999999999999999999986 578899999864                14667799999999999999999


Q ss_pred             EEEEEEcCCCCCHHHHHhh-cCCCC------HHHHHHHHHHHhhhc-Ccccc-----ceeecCCCEEEEeecCcceeecc
Q 042690           83 RLLVYKFMHNRSISSLLYE-CLRPT------WQQRMQDCIRDCWRT-RALAC-----RILLHDYFTVETSDLGLAKLLMI  149 (266)
Q Consensus        83 ~~lv~e~~~~~~L~~~l~~-~~~~~------~~~~l~~~~~~~~~~-~~~h~-----nili~~~~~~~l~Dfg~a~~~~~  149 (266)
                      .++||||+ ++.+..+... ...+.      +..++..++.++|.. +++|+     ||+++.++.++|+|||++.....
T Consensus        99 ~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A           99 VFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             EEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             EEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence            99999999 5566665543 23333      445555666777763 66666     99999999999999999976542


Q ss_pred             ccccccccccCCCCcCCccccC-----CCCCCcccchhhHHHHHHHHHhCCCcccCCC-------------------Ccc
Q 042690          150 NQTQTLTGMRETKGYLPPEWFR-----NMPVTVKVDVYSFGVMLLEIISCRCVERQGS-------------------DPK  205 (266)
Q Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-------------------~~~  205 (266)
                      .  .......+++.|+|||++.     +..++.++||||||+++|+|++|+.||....                   ...
T Consensus       178 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (318)
T 2dyl_A          178 D--KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMG  255 (318)
T ss_dssp             -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSC
T ss_pred             C--ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCC
Confidence            2  2223456899999999884     4567889999999999999999999996511                   112


Q ss_pred             ccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          206 TLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       206 ~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      ....+.+++.+||+.||.+||+++++++
T Consensus       256 ~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          256 FSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            4567889999999999999999999875


No 236
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-34  Score=244.32  Aligned_cols=206  Identities=20%  Similarity=0.293  Sum_probs=165.3

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------------HHhhhc----CCCceeeeeeEEEe
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------------KVVHVA----HHKNLVCLLGYHIE   79 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------------~~l~~~----~h~~iv~~~~~~~~   79 (266)
                      ++|.+.+.||+|+||.||+|.+. .++..||+|.+.                    ..++.+    +||||+++++++..
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~  109 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRL-TDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET  109 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECT-TTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred             hceEEeeEEEcCCCEEEEEEEEc-cCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence            47999999999999999999975 678889999763                    255555    89999999999998


Q ss_pred             CCeEEEEEEc-CCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeec-CCCEEEEeecCccee
Q 042690           80 QECRLLVYKF-MHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLH-DYFTVETSDLGLAKL  146 (266)
Q Consensus        80 ~~~~~lv~e~-~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~-~~~~~~l~Dfg~a~~  146 (266)
                      .+..++|||+ +.+++|.+++.....+.      +..++..++.++|..+++|+     ||+++ .++.++|+|||++..
T Consensus       110 ~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~  189 (312)
T 2iwi_A          110 QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGAL  189 (312)
T ss_dssp             ---CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEE
T ss_pred             CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhh
Confidence            8899999999 78899999998766554      44556666678887777776     89999 899999999999987


Q ss_pred             eccccccccccccCCCCcCCccccCCCCC-CcccchhhHHHHHHHHHhCCCcccC---------CCCccccchHHHHHHH
Q 042690          147 LMINQTQTLTGMRETKGYLPPEWFRNMPV-TVKVDVYSFGVMLLEIISCRCVERQ---------GSDPKTLEKPVMIAIQ  216 (266)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~i~~~l~tg~~p~~~---------~~~~~~~~~~~~l~~~  216 (266)
                      ....   ......++..|+|||++.+..+ +.++||||||+++|+|++|+.||..         ..+......+.+++.+
T Consensus       190 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~li~~  266 (312)
T 2iwi_A          190 LHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRR  266 (312)
T ss_dssp             CCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTSCHHHHHHHHH
T ss_pred             cccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccCCHHHHHHHHH
Confidence            6422   2334568999999998876665 4589999999999999999999865         2234566788999999


Q ss_pred             hhhcCCCCCCCHHHHHH
Q 042690          217 FVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       217 cl~~~p~~Rps~~~il~  233 (266)
                      ||+.||.+||+++++++
T Consensus       267 ~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          267 CLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             HTCSSTTTSCCHHHHHH
T ss_pred             HccCChhhCcCHHHHhc
Confidence            99999999999999986


No 237
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=7.6e-35  Score=242.76  Aligned_cols=206  Identities=17%  Similarity=0.174  Sum_probs=169.3

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCeEEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      ++|.+.+.||+|+||.||+|.+. .+++.|++|++.                ++++.++||||+++++++...+..++||
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~-~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEc-CCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            57999999999999999999975 578889999753                3777889999999999999999999999


Q ss_pred             EcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCC---CEEEEeecCcceeecccccc
Q 042690           88 KFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDY---FTVETSDLGLAKLLMINQTQ  153 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~---~~~~l~Dfg~a~~~~~~~~~  153 (266)
                      ||+++++|.+++.....++      +..++..++..+|..+++|+     ||+++.+   +.++|+|||++......  .
T Consensus       101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~--~  178 (287)
T 2wei_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--T  178 (287)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC--S
T ss_pred             EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC--C
Confidence            9999999999987665544      44556666688888877776     8999754   47999999999765322  2


Q ss_pred             ccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCC---------------C----ccccchHHHHH
Q 042690          154 TLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGS---------------D----PKTLEKPVMIA  214 (266)
Q Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~---------------~----~~~~~~~~~l~  214 (266)
                      ......+++.|+|||.+.+ .++.++|+||||+++|+|++|..||....               .    ......+.+++
T Consensus       179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  257 (287)
T 2wei_A          179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI  257 (287)
T ss_dssp             SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHH
T ss_pred             ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHH
Confidence            2233457889999998876 48899999999999999999999986521               0    23456788999


Q ss_pred             HHhhhcCCCCCCCHHHHHH
Q 042690          215 IQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       215 ~~cl~~~p~~Rps~~~il~  233 (266)
                      .+||+.||.+||++.++++
T Consensus       258 ~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          258 RKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcccChhhCcCHHHHhc
Confidence            9999999999999999986


No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1.7e-34  Score=247.66  Aligned_cols=204  Identities=16%  Similarity=0.238  Sum_probs=164.3

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcCCCceeeeeeEEEeCCe-----
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAHHKNLVCLLGYHIEQEC-----   82 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~h~~iv~~~~~~~~~~~-----   82 (266)
                      .+|.+.+.||+|+||.||+|.+. .++..||+|++.                .+++.++||||+++++++...+.     
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDK-RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEEC-CCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            57999999999999999999976 678899999763                37778899999999999977653     


Q ss_pred             -EEEEEEcCCCCCHHHHHhhcCC----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           83 -RLLVYKFMHNRSISSLLYECLR----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        83 -~~lv~e~~~~~~L~~~l~~~~~----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                       .++||||+.+ +|.+++...-.    ..+..++..++.++|.++++|+     ||+++.++.++|+|||++.....   
T Consensus       103 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~---  178 (353)
T 3coi_A          103 DFYLVMPFMQT-DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA---  178 (353)
T ss_dssp             CCEEEEECCSE-EGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC------
T ss_pred             eEEEEeccccC-CHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCC---
Confidence             4999999974 88887753211    2355667777788888888887     89999999999999999976432   


Q ss_pred             cccccccCCCCcCCccccCC-CCCCcccchhhHHHHHHHHHhCCCcccCCC-----------------------------
Q 042690          153 QTLTGMRETKGYLPPEWFRN-MPVTVKVDVYSFGVMLLEIISCRCVERQGS-----------------------------  202 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~i~~~l~tg~~p~~~~~-----------------------------  202 (266)
                       ......+|+.|+|||.+.+ ..++.++||||||+++|+|++|+.||....                             
T Consensus       179 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  257 (353)
T 3coi_A          179 -EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK  257 (353)
T ss_dssp             ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred             -CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence             1234567999999998876 678999999999999999999999987522                             


Q ss_pred             -----------------CccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          203 -----------------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       203 -----------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                       .+.....+.+++.+||+.||.+||+++++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                             1233567789999999999999999999985


No 239
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=3.5e-34  Score=241.63  Aligned_cols=209  Identities=17%  Similarity=0.191  Sum_probs=163.1

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------HHhhhcC--CCceeeeeeEEEeCCeE
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------KVVHVAH--HKNLVCLLGYHIEQECR   83 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------~~l~~~~--h~~iv~~~~~~~~~~~~   83 (266)
                      .-..|.+.+.||+|+||.||++.+.  +++.||+|.+.                .+++.++  ||||+++++++..++..
T Consensus        26 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~  103 (313)
T 3cek_A           26 KGRIYSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI  103 (313)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECT--TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred             ccceEEEEEEecCCCCEEEEEEEcC--CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence            3457999999999999999999974  58889999763                2566676  59999999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcCCCC------HHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLRPT------WQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQT  152 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~  152 (266)
                      ++||| +.+++|.+++.....+.      +..++..++.++|..+++|+     ||+++ ++.++|+|||++........
T Consensus       104 ~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~  181 (313)
T 3cek_A          104 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT  181 (313)
T ss_dssp             EEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC------
T ss_pred             EEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCccc
Confidence            99999 55779999998766554      34556667788888888877     89996 48999999999987643222


Q ss_pred             c-ccccccCCCCcCCccccCC-----------CCCCcccchhhHHHHHHHHHhCCCcccCCC------------------
Q 042690          153 Q-TLTGMRETKGYLPPEWFRN-----------MPVTVKVDVYSFGVMLLEIISCRCVERQGS------------------  202 (266)
Q Consensus       153 ~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Di~slG~i~~~l~tg~~p~~~~~------------------  202 (266)
                      . ......+++.|+|||.+.+           ..++.++||||||+++|+|++|+.||....                  
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  261 (313)
T 3cek_A          182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF  261 (313)
T ss_dssp             --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCC
T ss_pred             cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCC
Confidence            2 2234568999999998865           467889999999999999999999986521                  


Q ss_pred             CccccchHHHHHHHhhhcCCCCCCCHHHHHHH
Q 042690          203 DPKTLEKPVMIAIQFVKEKPPLRPSLRIVALM  234 (266)
Q Consensus       203 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~il~~  234 (266)
                      +......+.+++.+||+.||.+||+++++++.
T Consensus       262 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            22234568899999999999999999999864


No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=2.1e-34  Score=253.70  Aligned_cols=205  Identities=18%  Similarity=0.216  Sum_probs=157.9

Q ss_pred             eeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------HHhhhc-CCCceeeeeeEEEeCCeEEEEEEcCCCC
Q 042690           26 IYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------KVVHVA-HHKNLVCLLGYHIEQECRLLVYKFMHNR   93 (266)
Q Consensus        26 ~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~~~   93 (266)
                      |...+.||+|+||+||.+..  .+++.||+|++.           .+++.+ +||||+++++++.+++..++||||+. +
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~--~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g   93 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGS--FQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L   93 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEE--SSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred             eeccCeEeeCCCeEEEEEEE--ECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence            44568899999999986654  478899999753           255554 89999999999999999999999996 5


Q ss_pred             CHHHHHhhcCCC-------------CHHHHHHHHHHHhhhcCcccc-----ceeecCC-------------CEEEEeecC
Q 042690           94 SISSLLYECLRP-------------TWQQRMQDCIRDCWRTRALAC-----RILLHDY-------------FTVETSDLG  142 (266)
Q Consensus        94 ~L~~~l~~~~~~-------------~~~~~l~~~~~~~~~~~~~h~-----nili~~~-------------~~~~l~Dfg  142 (266)
                      +|.+++......             .+..++..++.++|..+++|+     ||+++.+             +.++|+|||
T Consensus        94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG  173 (434)
T 2rio_A           94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG  173 (434)
T ss_dssp             EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred             CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence            999999754321             266778888899998888887     8999754             489999999


Q ss_pred             cceeecccccc---ccccccCCCCcCCccccCC-------CCCCcccchhhHHHHHHHHHh-CCCcccCCCC--------
Q 042690          143 LAKLLMINQTQ---TLTGMRETKGYLPPEWFRN-------MPVTVKVDVYSFGVMLLEIIS-CRCVERQGSD--------  203 (266)
Q Consensus       143 ~a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-------~~~~~~~Di~slG~i~~~l~t-g~~p~~~~~~--------  203 (266)
                      ++.........   ......||+.|+|||++.+       ..++.++|||||||++|+|+| |..||.....        
T Consensus       174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~  253 (434)
T 2rio_A          174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRG  253 (434)
T ss_dssp             TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHT
T ss_pred             cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcC
Confidence            99876533221   1234578999999998865       568899999999999999999 8889864211        


Q ss_pred             ------------ccccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          204 ------------PKTLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       204 ------------~~~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                  ......+.+++.+||+.||.+||++.++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          254 IFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             CCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence                        112356789999999999999999999875


No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=2.9e-34  Score=245.58  Aligned_cols=205  Identities=16%  Similarity=0.193  Sum_probs=165.3

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcCCCc------eeeeeeEEEeCCeEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAHHKN------LVCLLGYHIEQECRL   84 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~h~~------iv~~~~~~~~~~~~~   84 (266)
                      ++|.+.+.||+|+||.||+|.+....+..||+|.+.             .+++.++|++      ++.+++++...+..+
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~   98 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC   98 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence            589999999999999999999864455789999864             2556666554      899999999999999


Q ss_pred             EEEEcCCCCCHHHHHhhcC--CCC------HHHHHHHHHHHhhhcCcccc-----ceee-------------------cC
Q 042690           85 LVYKFMHNRSISSLLYECL--RPT------WQQRMQDCIRDCWRTRALAC-----RILL-------------------HD  132 (266)
Q Consensus        85 lv~e~~~~~~L~~~l~~~~--~~~------~~~~l~~~~~~~~~~~~~h~-----nili-------------------~~  132 (266)
                      +||||+ +++|.+++....  .++      +..++..++.++|..+++|+     ||++                   +.
T Consensus        99 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~  177 (355)
T 2eu9_A           99 IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVK  177 (355)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEES
T ss_pred             EEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccC
Confidence            999999 557877776543  333      44566777788888888887     8999                   66


Q ss_pred             CCEEEEeecCcceeeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCCcc-------
Q 042690          133 YFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPK-------  205 (266)
Q Consensus       133 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~~-------  205 (266)
                      ++.++|+|||++....    .......+|+.|+|||++.+..++.++||||||+++|+|++|..||.......       
T Consensus       178 ~~~~kl~Dfg~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  253 (355)
T 2eu9_A          178 NTSIRVADFGSATFDH----EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK  253 (355)
T ss_dssp             CCCEEECCCTTCEETT----SCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCcEEEeecCcccccc----ccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            7899999999998643    22234568999999999998899999999999999999999999997522110       


Q ss_pred             ----------------------------------------------------ccchHHHHHHHhhhcCCCCCCCHHHHHH
Q 042690          206 ----------------------------------------------------TLEKPVMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       206 ----------------------------------------------------~~~~~~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                                                                          ....+.+++.+||+.||.+|||++++++
T Consensus       254 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          254 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                                                                1235679999999999999999999874


No 242
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=1.5e-34  Score=249.28  Aligned_cols=205  Identities=15%  Similarity=0.202  Sum_probs=162.9

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcC-----------CCceeeeeeEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAH-----------HKNLVCLLGYHI   78 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~-----------h~~iv~~~~~~~   78 (266)
                      .++|.+.+.||+|+||.||+|.+. .+++.||+|.+.             .+++.+.           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDM-VNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEec-CCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            358999999999999999999975 678899999764             2444443           899999999987


Q ss_pred             eCC----eEEEEEEcCCCCCHHHHHhhcC--CCC------HHHHHHHHHHHhhhc-Ccccc-----ceeec------CCC
Q 042690           79 EQE----CRLLVYKFMHNRSISSLLYECL--RPT------WQQRMQDCIRDCWRT-RALAC-----RILLH------DYF  134 (266)
Q Consensus        79 ~~~----~~~lv~e~~~~~~L~~~l~~~~--~~~------~~~~l~~~~~~~~~~-~~~h~-----nili~------~~~  134 (266)
                      ..+    ..++||||+ +++|.+++....  .++      +..++..++.++|.. +++|+     ||+++      ..+
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~  175 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI  175 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcc
Confidence            654    688999999 789999997633  233      445666677888876 77776     89995      445


Q ss_pred             EEEEeecCcceeeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------
Q 042690          135 TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------  203 (266)
Q Consensus       135 ~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------  203 (266)
                      .++|+|||++.....    ......+|+.|+|||++.+..++.++||||||+++|+|+||+.||.....           
T Consensus       176 ~~kl~Dfg~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  251 (373)
T 1q8y_A          176 QIKIADLGNACWYDE----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  251 (373)
T ss_dssp             EEEECCCTTCEETTB----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             eEEEcccccccccCC----CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence            899999999987532    22345689999999999988899999999999999999999999974221           


Q ss_pred             ----------------------------------------------------ccccchHHHHHHHhhhcCCCCCCCHHHH
Q 042690          204 ----------------------------------------------------PKTLEKPVMIAIQFVKEKPPLRPSLRIV  231 (266)
Q Consensus       204 ----------------------------------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~i  231 (266)
                                                                          ......+.+++.+||+.||.+|||++++
T Consensus       252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el  331 (373)
T 1q8y_A          252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  331 (373)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHH
Confidence                                                                1223466789999999999999999999


Q ss_pred             HH
Q 042690          232 AL  233 (266)
Q Consensus       232 l~  233 (266)
                      ++
T Consensus       332 l~  333 (373)
T 1q8y_A          332 VN  333 (373)
T ss_dssp             HT
T ss_pred             hh
Confidence            86


No 243
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=5.7e-34  Score=246.93  Aligned_cols=172  Identities=18%  Similarity=0.245  Sum_probs=138.1

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-------------HHhhhcC-CC-----ceeeeeeEEEeCCeE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-------------KVVHVAH-HK-----NLVCLLGYHIEQECR   83 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-------------~~l~~~~-h~-----~iv~~~~~~~~~~~~   83 (266)
                      .++|.+.+.||+|+||+||+|.+. .+++.||+|++.             .+++.+. |+     +|+++++++...+..
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  131 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDR-VEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL  131 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEc-CCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence            467999999999999999999975 678889999864             2444443 44     599999999999999


Q ss_pred             EEEEEcCCCCCHHHHHhhcC--CCC------HHHHHHHHHHHhhh--cCcccc-----ceeec--CCCEEEEeecCccee
Q 042690           84 LLVYKFMHNRSISSLLYECL--RPT------WQQRMQDCIRDCWR--TRALAC-----RILLH--DYFTVETSDLGLAKL  146 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~--~~~------~~~~l~~~~~~~~~--~~~~h~-----nili~--~~~~~~l~Dfg~a~~  146 (266)
                      ++||||+.+ +|.+++....  .++      +..++..++.++|.  .+++|+     ||+++  .++.+||+|||++..
T Consensus       132 ~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~  210 (382)
T 2vx3_A          132 CLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ  210 (382)
T ss_dssp             EEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence            999999965 9999998653  233      34555566676663  356665     99995  478899999999987


Q ss_pred             eccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccC
Q 042690          147 LMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQ  200 (266)
Q Consensus       147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~  200 (266)
                      ...    ......+|+.|+|||++.+..++.++|||||||++|+|+||+.||..
T Consensus       211 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          211 LGQ----RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             TTC----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccc----ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            532    22346689999999999998999999999999999999999999975


No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1e-33  Score=248.92  Aligned_cols=207  Identities=16%  Similarity=0.205  Sum_probs=159.4

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------HHhhhc-CCCceeeeeeEEEeCCeEEEEEEcCC
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------KVVHVA-HHKNLVCLLGYHIEQECRLLVYKFMH   91 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~   91 (266)
                      ..|.+.+.||+|+||+|+....  .+++.||||++.           .+++.+ +||||+++++++.+....++||||+.
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~--~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~  101 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGM--FDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA  101 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEE--SSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             EEEecCCeeecCcCEEEEEEEE--eCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence            4699999999999998654433  378899999874           377777 79999999999999999999999997


Q ss_pred             CCCHHHHHhhcCC-------CCHHHHHHHHHHHhhhcCcccc-----ceeecC-----CCEEEEeecCcceeeccccc--
Q 042690           92 NRSISSLLYECLR-------PTWQQRMQDCIRDCWRTRALAC-----RILLHD-----YFTVETSDLGLAKLLMINQT--  152 (266)
Q Consensus        92 ~~~L~~~l~~~~~-------~~~~~~l~~~~~~~~~~~~~h~-----nili~~-----~~~~~l~Dfg~a~~~~~~~~--  152 (266)
                      + +|.+++.....       ..+..++..++.++|..+++|+     ||+++.     ...++|+|||+++.......  
T Consensus       102 g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~  180 (432)
T 3p23_A          102 A-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF  180 (432)
T ss_dssp             E-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-------
T ss_pred             C-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcce
Confidence            4 99999975432       2466778888899998888887     899953     23678999999987643221  


Q ss_pred             cccccccCCCCcCCccccC---CCCCCcccchhhHHHHHHHHHh-CCCcccCCCC------------------ccccchH
Q 042690          153 QTLTGMRETKGYLPPEWFR---NMPVTVKVDVYSFGVMLLEIIS-CRCVERQGSD------------------PKTLEKP  210 (266)
Q Consensus       153 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~i~~~l~t-g~~p~~~~~~------------------~~~~~~~  210 (266)
                      .......||+.|+|||++.   ...++.++|||||||++|+|+| |..||.....                  ......+
T Consensus       181 ~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (432)
T 3p23_A          181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIA  260 (432)
T ss_dssp             -----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHH
T ss_pred             eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHH
Confidence            2233467899999999987   4567889999999999999999 8888864211                  1112346


Q ss_pred             HHHHHHhhhcCCCCCCCHHHHHH
Q 042690          211 VMIAIQFVKEKPPLRPSLRIVAL  233 (266)
Q Consensus       211 ~~l~~~cl~~~p~~Rps~~~il~  233 (266)
                      .+++.+||+.||.+||+++++++
T Consensus       261 ~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          261 RELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHhCCHhhCCCHHHHHh
Confidence            78999999999999999999973


No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=5.1e-33  Score=231.90  Aligned_cols=190  Identities=12%  Similarity=0.058  Sum_probs=157.7

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCCCceeeeeeEEEeCCeEEEE
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHHKNLVCLLGYHIEQECRLLV   86 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h~~iv~~~~~~~~~~~~~lv   86 (266)
                      ++|.+.+.||+|+||.||+|.+. .+++.||+|.+.                 ..++.++||||+++++++..++..|+|
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDT-ALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEET-TTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEec-CCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            57999999999999999999985 568899999875                 256788999999999999999999999


Q ss_pred             EEcCCCCCHHHHHhhcCC----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeecccccccccc
Q 042690           87 YKFMHNRSISSLLYECLR----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQTLTG  157 (266)
Q Consensus        87 ~e~~~~~~L~~~l~~~~~----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~~  157 (266)
                      |||+++++|.+++.....    ..+..++..++.++|.++++|+     ||+++.+|.++|++++               
T Consensus       110 ~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~---------------  174 (286)
T 3uqc_A          110 AEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA---------------  174 (286)
T ss_dssp             EECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC---------------
T ss_pred             EEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc---------------
Confidence            999999999999965321    2355667777788888888887     9999999999988443               


Q ss_pred             ccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC----------------------ccccchHHHHHH
Q 042690          158 MRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD----------------------PKTLEKPVMIAI  215 (266)
Q Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~----------------------~~~~~~~~~l~~  215 (266)
                            |++       +++.++||||||+++|+|+||+.||.....                      +.....+.+++.
T Consensus       175 ------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  241 (286)
T 3uqc_A          175 ------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAA  241 (286)
T ss_dssp             ------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHH
T ss_pred             ------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHH
Confidence                  333       367899999999999999999999976322                      224456789999


Q ss_pred             HhhhcCCCCCCCHHHHHHHHHHHHhCCC
Q 042690          216 QFVKEKPPLRPSLRIVALMLQSILEVPS  243 (266)
Q Consensus       216 ~cl~~~p~~Rps~~~il~~l~~~~~~~~  243 (266)
                      +||+.||.+| |+.++++.|+.......
T Consensus       242 ~~l~~dP~~R-s~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          242 RSVQGDGGIR-SASTLLNLMQQATAVAD  268 (286)
T ss_dssp             HHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred             HHcccCCccC-CHHHHHHHHHHHhccCC
Confidence            9999999999 99999999999876543


No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=1.3e-33  Score=257.52  Aligned_cols=217  Identities=19%  Similarity=0.157  Sum_probs=170.3

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEe------CC
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIE------QE   81 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~------~~   81 (266)
                      +++|.+.+.||+|+||.||+|.+. .++..||+|++.               .+++.++||||+++++++..      .+
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~-~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQ-DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCT-TTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            468999999999999999999975 678899999753               47889999999999998754      56


Q ss_pred             eEEEEEEcCCCCCHHHHHhhcC---C------CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCE---EEEeecCcc
Q 042690           82 CRLLVYKFMHNRSISSLLYECL---R------PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFT---VETSDLGLA  144 (266)
Q Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~---~------~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~---~~l~Dfg~a  144 (266)
                      ..++||||+++++|.+++....   .      ..+..++..++.++|..+++|+     ||+++.++.   ++|+|||++
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a  171 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA  171 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred             eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence            7899999999999999998643   2      2355667777788888888887     899997664   999999999


Q ss_pred             eeeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC-----------------------
Q 042690          145 KLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG-----------------------  201 (266)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~-----------------------  201 (266)
                      ......  .......+++.|+|||.+.+..++.++||||||+++|+|++|..||...                       
T Consensus       172 ~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~  249 (676)
T 3qa8_A          172 KELDQG--ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDD  249 (676)
T ss_dssp             CBTTSC--CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred             cccccc--cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence            875422  2334467899999999999889999999999999999999999998531                       


Q ss_pred             ----------------CCccccchHHHHHHHhhhcCCCCCCCHHH-----HHHHHHHHHhCC
Q 042690          202 ----------------SDPKTLEKPVMIAIQFVKEKPPLRPSLRI-----VALMLQSILEVP  242 (266)
Q Consensus       202 ----------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~-----il~~l~~~~~~~  242 (266)
                                      ........+.+++.+||+.||.+||++++     +++.++.+....
T Consensus       250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k  311 (676)
T 3qa8_A          250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK  311 (676)
T ss_dssp             CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred             hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence                            01123466889999999999999999987     556676665543


No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3.1e-33  Score=258.96  Aligned_cols=208  Identities=15%  Similarity=0.154  Sum_probs=162.8

Q ss_pred             CceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------------HHhhhcCCCceeeeeeEEEeCCe-----E
Q 042690           24 SHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------------KVVHVAHHKNLVCLLGYHIEQEC-----R   83 (266)
Q Consensus        24 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------------~~l~~~~h~~iv~~~~~~~~~~~-----~   83 (266)
                      ++|.+.+.||+|+||.||+|.+...+++.|++|.+.               .+++.++||||+++++++...+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            579999999999999999999864468899999763               36788999999999999987654     7


Q ss_pred             EEEEEcCCCCCHHHHHhhcCC----CCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc
Q 042690           84 LLVYKFMHNRSISSLLYECLR----PTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT  154 (266)
Q Consensus        84 ~lv~e~~~~~~L~~~l~~~~~----~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~  154 (266)
                      |+||||+++++|.+++...-.    ..+..++..++.++|.++++|+     ||+++.+ .+||+|||+++.....    
T Consensus       160 ~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~----  234 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF----  234 (681)
T ss_dssp             EEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC----
T ss_pred             EEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC----
Confidence            999999999999998865211    2344566667788888888877     8999885 8999999999875422    


Q ss_pred             cccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC----c-----cccchHHHHHHHhhhcCCCCC
Q 042690          155 LTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD----P-----KTLEKPVMIAIQFVKEKPPLR  225 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~----~-----~~~~~~~~l~~~cl~~~p~~R  225 (266)
                       ....||+.|+|||++.+.. +.++||||||+++|+|++|..|+.....    .     .....+.+++.+||+.||.+|
T Consensus       235 -~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R  312 (681)
T 2pzi_A          235 -GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQR  312 (681)
T ss_dssp             -SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGS
T ss_pred             -CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccccccccccccCHHHHHHHhhhccCChhhC
Confidence             3456899999999887654 8899999999999999999888764211    1     123467789999999999999


Q ss_pred             CC-HHHHHHHHHHH
Q 042690          226 PS-LRIVALMLQSI  238 (266)
Q Consensus       226 ps-~~~il~~l~~~  238 (266)
                      |+ ++++...|...
T Consensus       313 ~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          313 FTTAEEMSAQLTGV  326 (681)
T ss_dssp             CSSHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH
Confidence            95 56666666654


No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=4.6e-32  Score=227.30  Aligned_cols=199  Identities=14%  Similarity=0.162  Sum_probs=158.4

Q ss_pred             cCceeee-eccCCCcceEEEEEEEcCCCcceeeeeeHHH---------H-hhhcCCCceeeeeeEEEe----CCeEEEEE
Q 042690           23 FSHIYSL-KKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK---------V-VHVAHHKNLVCLLGYHIE----QECRLLVY   87 (266)
Q Consensus        23 ~~~~~~~-~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~---------~-l~~~~h~~iv~~~~~~~~----~~~~~lv~   87 (266)
                      .++|++. +.||+|+||.||++.+. .++..||+|.+..         + .+..+||||+++++++..    ....++||
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~   94 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNK-RTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM   94 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEc-CCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEE
Confidence            3467777 77999999999999976 6788999998752         3 366789999999999987    66789999


Q ss_pred             EcCCCCCHHHHHhhcC--CCC------HHHHHHHHHHHhhhcCcccc-----ceeecC---CCEEEEeecCcceeecccc
Q 042690           88 KFMHNRSISSLLYECL--RPT------WQQRMQDCIRDCWRTRALAC-----RILLHD---YFTVETSDLGLAKLLMINQ  151 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~--~~~------~~~~l~~~~~~~~~~~~~h~-----nili~~---~~~~~l~Dfg~a~~~~~~~  151 (266)
                      ||+++++|.+++....  .++      +..++..++.++|..+++|+     ||+++.   ++.++|+|||++....   
T Consensus        95 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---  171 (299)
T 3m2w_A           95 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---  171 (299)
T ss_dssp             CCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT---
T ss_pred             eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc---
Confidence            9999999999998654  233      45666677788888887776     899998   7899999999987532   


Q ss_pred             ccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCC-----------------------ccccc
Q 042690          152 TQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSD-----------------------PKTLE  208 (266)
Q Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~-----------------------~~~~~  208 (266)
                                          +..++.++||||||+++|+|+||+.||.....                       .....
T Consensus       172 --------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (299)
T 3m2w_A          172 --------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE  231 (299)
T ss_dssp             --------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCH
T ss_pred             --------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCH
Confidence                                23467899999999999999999999964210                       23456


Q ss_pred             hHHHHHHHhhhcCCCCCCCHHHHHH--HHHHHHhCCCCC
Q 042690          209 KPVMIAIQFVKEKPPLRPSLRIVAL--MLQSILEVPSPP  245 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~~~il~--~l~~~~~~~~~~  245 (266)
                      .+.+++.+||+.||.+||+++++++  .+......+..+
T Consensus       232 ~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~~  270 (299)
T 3m2w_A          232 EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP  270 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCCB
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCCC
Confidence            7889999999999999999999986  455555444443


No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97  E-value=6.4e-31  Score=230.02  Aligned_cols=203  Identities=10%  Similarity=0.013  Sum_probs=150.4

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcCC-Cce---------eeeee
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAHH-KNL---------VCLLG   75 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~h-~~i---------v~~~~   75 (266)
                      ...|...+.||+|+||.||+|.+. .+++.||||++.                 .+++.++| +|.         +...+
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQ-ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             ceeEEEecccccCCCEEEEEEEec-CCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            345888999999999999999976 678899999765                 24555655 211         11111


Q ss_pred             E------------EEe-----CCeEEEEEEcCCCCCHHHHHhhc-------------CCCCHHHHHHHHHHHhhhcCccc
Q 042690           76 Y------------HIE-----QECRLLVYKFMHNRSISSLLYEC-------------LRPTWQQRMQDCIRDCWRTRALA  125 (266)
Q Consensus        76 ~------------~~~-----~~~~~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~l~~~~~~~~~~~~~h  125 (266)
                      .            ...     ....+++|+++ +++|.+++...             ..+.+..++..++.++|.++++|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH  234 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  234 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            1            111     12357778876 56999988511             11334466777778888888887


Q ss_pred             c-----ceeecCCCEEEEeecCcceeeccccccccccccCCCCcCCcccc----------CCCCCCcccchhhHHHHHHH
Q 042690          126 C-----RILLHDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWF----------RNMPVTVKVDVYSFGVMLLE  190 (266)
Q Consensus       126 ~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~Di~slG~i~~~  190 (266)
                      +     |||++.++.+||+|||+++.....    .....| +.|+|||++          .+..++.++|||||||++|+
T Consensus       235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e  309 (413)
T 3dzo_A          235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW  309 (413)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred             CCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence            7     999999999999999999865322    334566 999999988          55568889999999999999


Q ss_pred             HHhCCCcccCCC-----------CccccchHHHHHHHhhhcCCCCCCCHHHHH
Q 042690          191 IISCRCVERQGS-----------DPKTLEKPVMIAIQFVKEKPPLRPSLRIVA  232 (266)
Q Consensus       191 l~tg~~p~~~~~-----------~~~~~~~~~~l~~~cl~~~p~~Rps~~~il  232 (266)
                      |+||+.||....           ....+..+.+++.+||+.||.+||++.+++
T Consensus       310 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          310 IWCADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             HHHSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             HHHCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            999999997632           134556888999999999999999976663


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.96  E-value=1.1e-30  Score=222.41  Aligned_cols=195  Identities=12%  Similarity=0.033  Sum_probs=147.0

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------------------HHhhhcC---------CCce
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------------------KVVHVAH---------HKNL   70 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------------------~~l~~~~---------h~~i   70 (266)
                      ..++|.+.+.||+|+||.||+|.+   ++..||+|++.                      .+++.++         ||||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni   94 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIA---DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF   94 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEE---TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred             ccccchheeeecccCceEEEEEEe---CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence            356899999999999999999997   57899999764                      1445554         6666


Q ss_pred             eeeeeEE-----------------Ee-------------CCeEEEEEEcCCCCCHHHHHhhcCC------CCHHHHHHHH
Q 042690           71 VCLLGYH-----------------IE-------------QECRLLVYKFMHNRSISSLLYECLR------PTWQQRMQDC  114 (266)
Q Consensus        71 v~~~~~~-----------------~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~------~~~~~~l~~~  114 (266)
                      +++.+++                 .+             .+..++||||+++|++.+.+.. ..      ..+..++..+
T Consensus        95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHH
T ss_pred             hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHH
Confidence            6655553                 32             6789999999999876666543 22      3455667777


Q ss_pred             HHHhh-hcCcccc-----ceeecCCC--------------------EEEEeecCcceeeccccccccccccCCCCcCCcc
Q 042690          115 IRDCW-RTRALAC-----RILLHDYF--------------------TVETSDLGLAKLLMINQTQTLTGMRETKGYLPPE  168 (266)
Q Consensus       115 ~~~~~-~~~~~h~-----nili~~~~--------------------~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE  168 (266)
                      +.++| .++++|+     |||++.++                    .+||+|||+|+....      ....||+.|+|||
T Consensus       174 L~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~aPE  247 (336)
T 2vuw_A          174 LAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVSMDED  247 (336)
T ss_dssp             HHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCTTCSG
T ss_pred             HHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------CcEEEeecccChh
Confidence            78888 7777777     99999887                    999999999987642      1246899999999


Q ss_pred             ccCCCCCCcccchhhHHHH-HHHHHhCCCcccCC---------------C--------CccccchHHHHHHHhhhcCCCC
Q 042690          169 WFRNMPVTVKVDVYSFGVM-LLEIISCRCVERQG---------------S--------DPKTLEKPVMIAIQFVKEKPPL  224 (266)
Q Consensus       169 ~~~~~~~~~~~Di~slG~i-~~~l~tg~~p~~~~---------------~--------~~~~~~~~~~l~~~cl~~~p~~  224 (266)
                      ++.+.. +.++||||++++ .+++++|..||...               .        .+.....+.+++.+||+.|   
T Consensus       248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d---  323 (336)
T 2vuw_A          248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS---  323 (336)
T ss_dssp             GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS---
T ss_pred             hhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC---
Confidence            998766 899999998777 77788888887530               0        1124456778999999866   


Q ss_pred             CCCHHHHH
Q 042690          225 RPSLRIVA  232 (266)
Q Consensus       225 Rps~~~il  232 (266)
                        |+++++
T Consensus       324 --sa~e~l  329 (336)
T 2vuw_A          324 --SATDLL  329 (336)
T ss_dssp             --SHHHHH
T ss_pred             --CHHHHH
Confidence              777776


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.90  E-value=2.2e-25  Score=201.94  Aligned_cols=166  Identities=11%  Similarity=-0.030  Sum_probs=110.9

Q ss_pred             HHhhhc-CCCceeeeeeEEEeCCeEEEEEEcCCCCCHHHHHhhcCCCC---HHHHHHHHHHHhhhcCcccc-----ceee
Q 042690           60 KVVHVA-HHKNLVCLLGYHIEQECRLLVYKFMHNRSISSLLYECLRPT---WQQRMQDCIRDCWRTRALAC-----RILL  130 (266)
Q Consensus        60 ~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~---~~~~l~~~~~~~~~~~~~h~-----nili  130 (266)
                      ++|+++ .|+||+++++++++++..||||||++|++|.++|.+.+.++   +..++..++.++|.++++|+     |||+
T Consensus       293 ~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL  372 (569)
T 4azs_A          293 KFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMV  372 (569)
T ss_dssp             HHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEE
T ss_pred             HHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEE
Confidence            377787 59999999999999999999999999999999999877655   45667777789998888888     9999


Q ss_pred             cCCCEEEEeecCcceeeccccccccccccCCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCC--CCccccc
Q 042690          131 HDYFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQG--SDPKTLE  208 (266)
Q Consensus       131 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~--~~~~~~~  208 (266)
                      +.+|.+||+|||+|+..... ........||+.|||||++.+. +..++|+||+|++.+++.++..++...  ..+....
T Consensus       373 ~~dg~vKL~DFGlAr~~~~~-~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~~~~~l~~~~~~~~  450 (569)
T 4azs_A          373 DARQHARLIDFGSIVTTPQD-CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSNWLYAVWQEPVERW  450 (569)
T ss_dssp             CTTSCEEECCCTTEESCC----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHHHHHHHTSCGGGC
T ss_pred             CCCCCEEEeecccCeeCCCC-CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccchhHHHhhcCCCCCC
Confidence            99999999999999876432 2233446799999999998764 567899999999988876655443210  0111122


Q ss_pred             hHHHHHHHhhhcCCCCCCC
Q 042690          209 KPVMIAIQFVKEKPPLRPS  227 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps  227 (266)
                      .+..+...+...+|..||.
T Consensus       451 ~~~~l~~~l~~~~~~~~~~  469 (569)
T 4azs_A          451 NFVLLLALFEKKAKLPSAE  469 (569)
T ss_dssp             SHHHHHHHHHTGGGSCCGG
T ss_pred             cHHHHHHHHhCCCCCCCCC
Confidence            3445555566666665554


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.84  E-value=5.6e-22  Score=178.62  Aligned_cols=165  Identities=7%  Similarity=0.109  Sum_probs=126.9

Q ss_pred             eeeccCCCcceEEEEEEEcCCCcceeeeeeH----------------------HHHhhhcCCCceeeeeeEEEeCCeEEE
Q 042690           28 SLKKPCGGSFSTVYTGVLAPGDKTNIGVKKL----------------------DKVVHVAHHKNLVCLLGYHIEQECRLL   85 (266)
Q Consensus        28 ~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~----------------------~~~l~~~~h~~iv~~~~~~~~~~~~~l   85 (266)
                      ..+.||+|+||.||++.+   .+..+++|+.                      .++++.++||||+++..++......++
T Consensus       340 ~~~~LG~G~fg~Vy~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY---LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             --------CCEEEEEEEC---SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCEEeeCCCEEEEEEEE---CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            356899999999999964   4566677652                      147888999999976666667777899


Q ss_pred             EEEcCCCCCHHHHHhhcCCCCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeeccccccc------
Q 042690           86 VYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLMINQTQT------  154 (266)
Q Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~~~~~~~------  154 (266)
                      ||||+++++|.+++..  ...+..++..++.++|.++++|+     ||+++.  .+||+|||+++.........      
T Consensus       417 VmE~~~ggsL~~~l~~--~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~  492 (540)
T 3en9_A          417 MMSYINGKLAKDVIED--NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVF  492 (540)
T ss_dssp             EEECCCSEEHHHHSTT--CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHH
T ss_pred             EEECCCCCCHHHHHHH--HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhh
Confidence            9999999999999987  67888899999999998888887     899998  99999999999875332221      


Q ss_pred             cccccCCCCcCCccccCC--CCCCcccchhhHHHHHHHHHhCCCccc
Q 042690          155 LTGMRETKGYLPPEWFRN--MPVTVKVDVYSFGVMLLEIISCRCVER  199 (266)
Q Consensus       155 ~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~i~~~l~tg~~p~~  199 (266)
                      .....||+.|||||++.+  ..|+...|+|+..+-..+.+.++.++.
T Consensus       493 ~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          493 KKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             hhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            134578999999999876  457778899999998888888776553


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.68  E-value=2.4e-17  Score=136.68  Aligned_cols=124  Identities=8%  Similarity=-0.067  Sum_probs=97.0

Q ss_pred             eeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------------------------HHhhhcCCCceeee
Q 042690           26 IYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------------------------KVVHVAHHKNLVCL   73 (266)
Q Consensus        26 ~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------------------------~~l~~~~h~~iv~~   73 (266)
                      |.+.+.||+|+||.||+|.+  .++..||+|.+.                                .+++.++  | +++
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~--~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v  166 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS--EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV  166 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE--TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred             EEecCEeccCCCceEEEEEe--CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence            33449999999999999998  578899999862                                2555666  5 677


Q ss_pred             eeEEEeCCeEEEEEEcCCCCCHHHHHhhcCCCCHHHHHHHHHHHhhhcCcccc-----ceeecCCCEEEEeecCcceeec
Q 042690           74 LGYHIEQECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALAC-----RILLHDYFTVETSDLGLAKLLM  148 (266)
Q Consensus        74 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~~~~l~Dfg~a~~~~  148 (266)
                      .+++.. +..++||||+++++|.+ +.......+..++..++.++|.++++|+     ||+++ ++.++|+|||++..  
T Consensus       167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~--  241 (282)
T 1zar_A          167 PKVYAW-EGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVE--  241 (282)
T ss_dssp             CCEEEE-ETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEE--
T ss_pred             CeEEec-cceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeE--
Confidence            776544 45689999999999999 5443345677788888888888888887     99999 99999999999974  


Q ss_pred             cccccccccccCCCCcCCccccC
Q 042690          149 INQTQTLTGMRETKGYLPPEWFR  171 (266)
Q Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~  171 (266)
                                  +..++|||.+.
T Consensus       242 ------------~~~~~a~e~l~  252 (282)
T 1zar_A          242 ------------VGEEGWREILE  252 (282)
T ss_dssp             ------------TTSTTHHHHHH
T ss_pred             ------------CCCCCHHHHHH
Confidence                        33467888764


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.36  E-value=8e-13  Score=107.96  Aligned_cols=116  Identities=16%  Similarity=0.095  Sum_probs=83.9

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcce--eeeeeH--------------------------------------HHHhhh
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTN--IGVKKL--------------------------------------DKVVHV   64 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~--vaiK~~--------------------------------------~~~l~~   64 (266)
                      -|.+.+.||+|+||.||+|.+. .++..  ||+|..                                      ...++.
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~-~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGV-FDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEE-ETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEc-CCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            3678899999999999999973 35677  999952                                      124556


Q ss_pred             cCCCce--eeeeeEEEeCCeEEEEEEcCCC-C----CHHHHHhhc---CCCCHHHHHHHHHHHhh-hcCcccc-----ce
Q 042690           65 AHHKNL--VCLLGYHIEQECRLLVYKFMHN-R----SISSLLYEC---LRPTWQQRMQDCIRDCW-RTRALAC-----RI  128 (266)
Q Consensus        65 ~~h~~i--v~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~---~~~~~~~~l~~~~~~~~-~~~~~h~-----ni  128 (266)
                      +.|+++  ..+++.    ...++||||+.+ |    +|.++....   ....+..++..++.++| ..+++|+     ||
T Consensus       127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NI  202 (258)
T 1zth_A          127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNI  202 (258)
T ss_dssp             HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSE
T ss_pred             HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHE
Confidence            667654  333332    346799999942 3    788776431   22456677777888888 7777776     99


Q ss_pred             eecCCCEEEEeecCcceee
Q 042690          129 LLHDYFTVETSDLGLAKLL  147 (266)
Q Consensus       129 li~~~~~~~l~Dfg~a~~~  147 (266)
                      |++.  .++|+|||+|...
T Consensus       203 Ll~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          203 MYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             EESS--SEEECCCTTCEET
T ss_pred             EEcC--cEEEEECcccccC
Confidence            9998  8999999999764


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.22  E-value=1.2e-12  Score=112.22  Aligned_cols=120  Identities=8%  Similarity=-0.062  Sum_probs=84.7

Q ss_pred             eeeeeccCCCcceEEEEEEEcCCCcceeeeeeHHH----------------------------HhhhcCCCceeeeeeEE
Q 042690           26 IYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLDK----------------------------VVHVAHHKNLVCLLGYH   77 (266)
Q Consensus        26 ~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~~----------------------------~l~~~~h~~iv~~~~~~   77 (266)
                      |.+.+.||.|++|.||+|...  +++.||||+.+.                            +.....|+|+.++++..
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~--~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE--KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT--TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCEeeeCCceEEEEEECC--CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            789999999999999999974  688999997531                            00112255555543321


Q ss_pred             Ee------CCeEEEEEEcCCCCCHHHHHhhcCCCCHHHHHHHHHHHhhhcCcccc-----ceeecCCC----------EE
Q 042690           78 IE------QECRLLVYKFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTRALAC-----RILLHDYF----------TV  136 (266)
Q Consensus        78 ~~------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~l~~~~~~~~~~~~~h~-----nili~~~~----------~~  136 (266)
                      ..      ....+|||||+.+++|.++........+..++..++..+|..+++|+     |||++++|          .+
T Consensus       175 v~vp~p~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~  254 (397)
T 4gyi_A          175 FPVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTP  254 (397)
T ss_dssp             CSCCCEEEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEE
T ss_pred             CCCCeeeeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccce
Confidence            11      11236999999998887765433233455677777788888888887     99999887          48


Q ss_pred             EEeecCcceee
Q 042690          137 ETSDLGLAKLL  147 (266)
Q Consensus       137 ~l~Dfg~a~~~  147 (266)
                      .++||+-+...
T Consensus       255 ~iID~~Q~V~~  265 (397)
T 4gyi_A          255 IIIXFPQMVSM  265 (397)
T ss_dssp             EECCCTTCEET
T ss_pred             EEEEeCCcccC
Confidence            99999987654


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.61  E-value=4.1e-07  Score=73.80  Aligned_cols=74  Identities=16%  Similarity=0.078  Sum_probs=58.4

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcC-CCceeeeeeEEEeCCeEEEEE
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAH-HKNLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~-h~~iv~~~~~~~~~~~~~lv~   87 (266)
                      +..|.+...++.|+.+.||++..   .+..+++|...              ..++.+. +..+.++++++...+..|+||
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~---~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~   89 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVG---ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM   89 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEEC---SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred             hccceeEeeccCCCCCeEEEEEC---CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence            44677888899899999999974   35678888742              3555553 567888999998888999999


Q ss_pred             EcCCCCCHHHHH
Q 042690           88 KFMHNRSISSLL   99 (266)
Q Consensus        88 e~~~~~~L~~~l   99 (266)
                      ||++|.+|.+.+
T Consensus        90 e~i~G~~l~~~~  101 (263)
T 3tm0_A           90 SEADGVLCSEEY  101 (263)
T ss_dssp             ECCSSEEHHHHC
T ss_pred             EecCCeehhhcc
Confidence            999999988763


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.38  E-value=1.3e-06  Score=70.49  Aligned_cols=72  Identities=11%  Similarity=-0.028  Sum_probs=49.4

Q ss_pred             cCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------HHhhhcCCCc--eeeeeeEEEeCCeEEEEEEc
Q 042690           23 FSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------KVVHVAHHKN--LVCLLGYHIEQECRLLVYKF   89 (266)
Q Consensus        23 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------~~l~~~~h~~--iv~~~~~~~~~~~~~lv~e~   89 (266)
                      +..+.+....+.|..+.||++..  .++..+++|...           ..++.+.+.+  +.+++++...++..++||||
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~--~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~   96 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSA--QGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE   96 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEEC--TTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred             cCCCceEecccCCCCceEEEEec--CCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence            44555444434666799999975  356678888532           3555554433  55688888877788999999


Q ss_pred             CCCCCHH
Q 042690           90 MHNRSIS   96 (266)
Q Consensus        90 ~~~~~L~   96 (266)
                      ++|.+|.
T Consensus        97 i~G~~l~  103 (264)
T 1nd4_A           97 VPGQDLL  103 (264)
T ss_dssp             CSSEETT
T ss_pred             cCCcccC
Confidence            9998774


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=97.64  E-value=5.9e-05  Score=63.94  Aligned_cols=71  Identities=11%  Similarity=0.192  Sum_probs=48.9

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------------HHhhhcC--CCceeeeeeEEEeC--
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------------KVVHVAH--HKNLVCLLGYHIEQ--   80 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------------~~l~~~~--h~~iv~~~~~~~~~--   80 (266)
                      ........+.++.|.++.||+....   +..+++|+..                 .+++.+.  +..+.+++.++.+.  
T Consensus        36 ~~~~~~~~~~l~~G~sn~~y~v~~~---~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~  112 (359)
T 3dxp_A           36 GFAGPLSVEQFKGGQSNPTFKLVTP---GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV  112 (359)
T ss_dssp             TCCCCCEEEECCC-CCSCEEEEECS---SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT
T ss_pred             CCCCCceEEEcCCcccceEEEEEEC---CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc
Confidence            3344556788999999999998752   3455555442                 3555565  34578888887765  


Q ss_pred             -CeEEEEEEcCCCCCH
Q 042690           81 -ECRLLVYKFMHNRSI   95 (266)
Q Consensus        81 -~~~~lv~e~~~~~~L   95 (266)
                       +..++||||++|.++
T Consensus       113 ~g~~~~vme~v~G~~l  128 (359)
T 3dxp_A          113 IGRAFYIMEFVSGRVL  128 (359)
T ss_dssp             TSSCEEEEECCCCBCC
T ss_pred             cCCeEEEEEecCCeec
Confidence             457899999998766


No 259
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=96.76  E-value=0.0069  Score=48.73  Aligned_cols=68  Identities=10%  Similarity=0.037  Sum_probs=45.0

Q ss_pred             ccCCCcce-EEEEEEEcCCCcceeeeeeHH-----------HHhhhcC-CCceeeeeeEEEeCCeEEEEEEcCCCCCHHH
Q 042690           31 KPCGGSFS-TVYTGVLAPGDKTNIGVKKLD-----------KVVHVAH-HKNLVCLLGYHIEQECRLLVYKFMHNRSISS   97 (266)
Q Consensus        31 ~ig~G~~g-~V~~~~~~~~~~~~vaiK~~~-----------~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~   97 (266)
                      .+..|..+ .||+.... .++..+.+|+-.           ..++.+. +--+.++++++.+.+..++|||+++|.++.+
T Consensus        31 ~~~~G~S~~~v~rl~~~-~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~  109 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGK-PNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ  109 (272)
T ss_dssp             EEECSSSSCEEEEEECC-TTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred             EccCCCcCCeEEEEEec-CCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence            34445444 68987754 345567777532           3444443 2236678888888899999999999987765


Q ss_pred             HH
Q 042690           98 LL   99 (266)
Q Consensus        98 ~l   99 (266)
                      ..
T Consensus       110 ~~  111 (272)
T 4gkh_A          110 VL  111 (272)
T ss_dssp             HH
T ss_pred             cc
Confidence            43


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=96.69  E-value=0.0025  Score=53.03  Aligned_cols=69  Identities=13%  Similarity=0.156  Sum_probs=43.5

Q ss_pred             hHhcccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhcCC----CceeeeeeEEEeCC
Q 042690           18 RVFGSFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVAHH----KNLVCLLGYHIEQE   81 (266)
Q Consensus        18 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~~h----~~iv~~~~~~~~~~   81 (266)
                      ..+|...++...+.++.|....||+.      +..+++|...            ..++.+.+    -.+.+++++    +
T Consensus        31 ~~~g~~~~i~~v~~l~~G~~n~vy~v------g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~  100 (320)
T 3r70_A           31 EHLNKQIKINELRYLSSGDDSDTFLC------NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----S  100 (320)
T ss_dssp             HHHHHHSCCSCEEEEEECSSEEEEEE------TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----C
T ss_pred             HHcCCCcceEEEEeCCCCCCceEEEE------CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----C
Confidence            33442235566778899999999987      3445665322            34555554    123444444    4


Q ss_pred             eEEEEEEcCCCCCHH
Q 042690           82 CRLLVYKFMHNRSIS   96 (266)
Q Consensus        82 ~~~lv~e~~~~~~L~   96 (266)
                      ..++||||++|.++.
T Consensus       101 ~~~lvme~i~G~~l~  115 (320)
T 3r70_A          101 DRFNIMKYIKGERIT  115 (320)
T ss_dssp             SSCEEEECCCCBCCC
T ss_pred             CcEEEEeecCCcccc
Confidence            568999999998775


No 261
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=96.28  E-value=0.024  Score=47.95  Aligned_cols=71  Identities=8%  Similarity=0.012  Sum_probs=48.7

Q ss_pred             ccCceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH---------HHhhhcCCCc--eeeeeeEEEeC-CeEEEEEEc
Q 042690           22 SFSHIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD---------KVVHVAHHKN--LVCLLGYHIEQ-ECRLLVYKF   89 (266)
Q Consensus        22 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~---------~~l~~~~h~~--iv~~~~~~~~~-~~~~lv~e~   89 (266)
                      .+......+.++.|....+|+...   ++..+++|...         ..++.+....  +.+++.++... +..|+||||
T Consensus        39 ~~~~~~~i~~l~gG~~n~~y~v~~---~g~~~vlK~~~~~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~  115 (362)
T 3ovc_A           39 KFDSVSDLMQLSEGEESRAFSFDV---GGRGYVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRR  115 (362)
T ss_dssp             HSSCCEEEEEEEECSSEEEEEEEE---TTEEEEEEEESCCHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEEC
T ss_pred             hcCCCceEEECCCCCcceEEEEEE---CCcEEEEEeCCchhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEe
Confidence            344566678899999999998875   46677777542         3555555333  45667666654 568899999


Q ss_pred             CCCCCH
Q 042690           90 MHNRSI   95 (266)
Q Consensus        90 ~~~~~L   95 (266)
                      ++|.++
T Consensus       116 l~G~~l  121 (362)
T 3ovc_A          116 AQGVTL  121 (362)
T ss_dssp             CCSEET
T ss_pred             cCCCCc
Confidence            997554


No 262
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.89  E-value=0.046  Score=42.63  Aligned_cols=133  Identities=13%  Similarity=0.032  Sum_probs=77.8

Q ss_pred             CCHHHHHhhcC-CCCHHHHHHHHH------HHh-----hhcCccc-cceeecCCCEEEEeecCcceeecccccccccccc
Q 042690           93 RSISSLLYECL-RPTWQQRMQDCI------RDC-----WRTRALA-CRILLHDYFTVETSDLGLAKLLMINQTQTLTGMR  159 (266)
Q Consensus        93 ~~L~~~l~~~~-~~~~~~~l~~~~------~~~-----~~~~~~h-~nili~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~  159 (266)
                      -+|.+.+.... .++..+..+.+.      +..     .+..+.. ..++++.+|.+.+.+ ..+.             .
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-------------~   98 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD-------------A   98 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C-----------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-------------c
Confidence            47899998544 455444333332      222     1112222 268888888887663 1110             1


Q ss_pred             CCCCcCCccccCCCCCCcccchhhHHHHHHHHHhCCCcccCCCCccccchHHHHHHHhhhc-------------------
Q 042690          160 ETKGYLPPEWFRNMPVTVKVDVYSFGVMLLEIISCRCVERQGSDPKTLEKPVMIAIQFVKE-------------------  220 (266)
Q Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~i~~~l~tg~~p~~~~~~~~~~~~~~~l~~~cl~~-------------------  220 (266)
                      ....+.+||... ...+.+.=|||||+++|..+-...|.  ......++.+-+++..|.+.                   
T Consensus        99 ~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e--~eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~  175 (229)
T 2yle_A           99 GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE--NEERELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGLG  175 (229)
T ss_dssp             --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT--TEEECCCHHHHHHHHHHTTCCC-----------------
T ss_pred             cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc--ccchhhCHHHHHHHHHHHhcccccccccccccccccccc
Confidence            133566788653 23456788999999999999765544  33556677777888888755                   


Q ss_pred             ------CCCCCCCHHHHHHHHHHHHhCC
Q 042690          221 ------KPPLRPSLRIVALMLQSILEVP  242 (266)
Q Consensus       221 ------~p~~Rps~~~il~~l~~~~~~~  242 (266)
                            .+..|+++++|++....-...|
T Consensus       176 d~~~~~~~~~~~sl~~Vi~~C~~hl~~p  203 (229)
T 2yle_A          176 DEDEKRKISAIRSYRDVMKLCAAHLPTE  203 (229)
T ss_dssp             ---CCSCCCCCCSHHHHHHHHHTTSSSG
T ss_pred             cccccccccCcCCHHHHHHHHHhhccCc
Confidence                  2457889999988877665544


No 263
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=95.24  E-value=0.2  Score=42.64  Aligned_cols=62  Identities=8%  Similarity=0.044  Sum_probs=38.2

Q ss_pred             eeeccCCCcceEEEEEEEcCCCcceeeeeeH---------------------HHHhhhcCC--C-ceeeeeeEEEeCCeE
Q 042690           28 SLKKPCGGSFSTVYTGVLAPGDKTNIGVKKL---------------------DKVVHVAHH--K-NLVCLLGYHIEQECR   83 (266)
Q Consensus        28 ~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~---------------------~~~l~~~~h--~-~iv~~~~~~~~~~~~   83 (266)
                      ..+.||.|..+.||++... ..+..+++|..                     .+.++.+..  + .+.+++.+  +....
T Consensus        34 ~~~~lg~G~~n~vyrv~~~-~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~  110 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQ-EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMA  110 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC-----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTT
T ss_pred             EEEECCCCceEEEEEEEEC-CCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCcc
Confidence            4678999999999999753 24567777731                     124444421  3 34455543  34456


Q ss_pred             EEEEEcCCC
Q 042690           84 LLVYKFMHN   92 (266)
Q Consensus        84 ~lv~e~~~~   92 (266)
                      ++|||++.+
T Consensus       111 ~lvmE~l~g  119 (397)
T 2olc_A          111 VTVMEDLSH  119 (397)
T ss_dssp             EEEECCCTT
T ss_pred             EEEEEeCCC
Confidence            799999976


No 264
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=95.01  E-value=0.072  Score=43.50  Aligned_cols=84  Identities=14%  Similarity=0.124  Sum_probs=56.6

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCC---ceeeeeeEEEeCCeEEEEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHK---NLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~---~iv~~~~~~~~~~~~~lv~   87 (266)
                      .+...+.|+.|.++.||++..  .++..+++|+..              ..++.+.+.   .+.+++++.    ..++||
T Consensus        16 ~~~~~~~l~gG~~n~vy~v~~--~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm   89 (288)
T 3d1u_A           16 EVAAVAERGHSHRWHLYRVEL--ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM   89 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEE--TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred             CccceeeeCCcchhheEEEEe--CCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence            345677899999999999986  367778888721              356666654   466777653    368999


Q ss_pred             EcCCCCCHHHHHhhcCCCCHHHHHHHHHHHhhhcC
Q 042690           88 KFMHNRSISSLLYECLRPTWQQRMQDCIRDCWRTR  122 (266)
Q Consensus        88 e~~~~~~L~~~l~~~~~~~~~~~l~~~~~~~~~~~  122 (266)
                      ||++++++..        .....+...+..+|...
T Consensus        90 e~l~g~~~~~--------~~~~~lg~~LA~LH~~~  116 (288)
T 3d1u_A           90 EWVDERPPTP--------EAAERFGHQLAAMHLAG  116 (288)
T ss_dssp             ECCCCCCCCH--------HHHHHHHHHHHHHHHTC
T ss_pred             EecccCCCCh--------HHHHHHHHHHHHHHcCC
Confidence            9999987532        12344555555565543


No 265
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=93.33  E-value=0.76  Score=39.39  Aligned_cols=61  Identities=10%  Similarity=0.144  Sum_probs=40.1

Q ss_pred             eeeeccCCCcceEEEEEEEcCCCcceeeee--------eH-------------HHHh---hhcCCCceeeeeeEEEeCCe
Q 042690           27 YSLKKPCGGSFSTVYTGVLAPGDKTNIGVK--------KL-------------DKVV---HVAHHKNLVCLLGYHIEQEC   82 (266)
Q Consensus        27 ~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK--------~~-------------~~~l---~~~~h~~iv~~~~~~~~~~~   82 (266)
                      ...+.||.|..+.||++..   ++..+++|        .-             .+.+   ....+..+.+++.+.  .+.
T Consensus        37 ~~i~~l~~G~~n~vyrv~~---~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~  111 (420)
T 2pyw_A           37 LVIKEVGDGNLNFVFIVVG---SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTM  111 (420)
T ss_dssp             CEEEECCCSSSCEEEEEEC---SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTT
T ss_pred             eEEEEccCCCcEEEEEEEc---CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCc
Confidence            3467899999999999963   45678888        11             0111   122234566666664  566


Q ss_pred             EEEEEEcC-CC
Q 042690           83 RLLVYKFM-HN   92 (266)
Q Consensus        83 ~~lv~e~~-~~   92 (266)
                      .++||||+ ++
T Consensus       112 ~~lv~e~l~~g  122 (420)
T 2pyw_A          112 ALIGMRYLEPP  122 (420)
T ss_dssp             TEEEECCCCTT
T ss_pred             cEEEEeecCCc
Confidence            78999999 76


No 266
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=93.14  E-value=0.62  Score=38.39  Aligned_cols=87  Identities=11%  Similarity=0.082  Sum_probs=59.7

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH-----------HHhhhcC---CCceeeeeeEEEeCCeEEEEEEcC
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD-----------KVVHVAH---HKNLVCLLGYHIEQECRLLVYKFM   90 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~-----------~~l~~~~---h~~iv~~~~~~~~~~~~~lv~e~~   90 (266)
                      .....+.|+.|....+|+...   ++..+++|.-.           ..++.+.   ...+.+++.+....+..++||||+
T Consensus        37 ~i~~~~~l~gG~~n~~y~v~~---~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           37 FIKHKEKLYSGEMNEIWLIND---EVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             CCCEEEEECCSSSSEEEEEES---SSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred             ceeeeEEeCCccceeeeEEEE---CCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence            455677899999999999874   45667777532           2344442   356788888888788899999999


Q ss_pred             CCCCHHHHHhhcCCCCHHHHHHHHHHHhhhcC
Q 042690           91 HNRSISSLLYECLRPTWQQRMQDCIRDCWRTR  122 (266)
Q Consensus        91 ~~~~L~~~l~~~~~~~~~~~l~~~~~~~~~~~  122 (266)
                      ++.++.        ......+...+..+|...
T Consensus       114 ~G~~~~--------~~~~~~lG~~LA~LH~~~  137 (312)
T 3jr1_A          114 NKSKNK--------QSSFTIFAEKIAQLHQIQ  137 (312)
T ss_dssp             CCCCCC--------TTHHHHHHHHHHHHHHCC
T ss_pred             cCCCCC--------chhHHHHHHHHHHHHcCC
Confidence            997642        133455556666666554


No 267
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=92.83  E-value=0.57  Score=38.29  Aligned_cols=63  Identities=5%  Similarity=-0.058  Sum_probs=40.1

Q ss_pred             eeccCCCcceEEEEEEEcCCCcceeeeeeH------------HHHhhhcCCC---ceeeeeeEEE-eCCeEEEEEEcCCC
Q 042690           29 LKKPCGGSFSTVYTGVLAPGDKTNIGVKKL------------DKVVHVAHHK---NLVCLLGYHI-EQECRLLVYKFMHN   92 (266)
Q Consensus        29 ~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~------------~~~l~~~~h~---~iv~~~~~~~-~~~~~~lv~e~~~~   92 (266)
                      .+.++.|....||+.      +..+++|..            ..+++.+.+.   .+.+++.+.. ..+..++|||+++|
T Consensus        24 v~~l~~G~~n~v~~v------g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV------NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE------TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE------CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            456777888888876      233444432            2466666542   3455666654 34557899999999


Q ss_pred             CCHHH
Q 042690           93 RSISS   97 (266)
Q Consensus        93 ~~L~~   97 (266)
                      .++..
T Consensus        98 ~~l~~  102 (306)
T 3tdw_A           98 QILGE  102 (306)
T ss_dssp             EECHH
T ss_pred             eECch
Confidence            77764


No 268
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=92.20  E-value=1.4  Score=36.16  Aligned_cols=66  Identities=12%  Similarity=0.206  Sum_probs=35.6

Q ss_pred             eeeeccCCCcceEEEEEEEcCCCcceeeeeeHH----------HHhhhc-----CCCceeeee-e--EEEeCCeEEEEEE
Q 042690           27 YSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD----------KVVHVA-----HHKNLVCLL-G--YHIEQECRLLVYK   88 (266)
Q Consensus        27 ~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~----------~~l~~~-----~h~~iv~~~-~--~~~~~~~~~lv~e   88 (266)
                      ...+.|+.|..+.||+....  ++ .+++|+..          .+++.+     ..|.++... +  +....+..+++|+
T Consensus        35 ~~~~~l~gG~~n~~~~v~~~--~~-~~vlk~~~~~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           35 EKIDVIQGNQMALVWKVHTD--SG-AVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             CEEEECC----CEEEEEEET--TE-EEEEEEECSCHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             EEeeeccccccCcEEEEEeC--CC-CEEEEecCCCHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            34567777778899998862  33 47777653          122222     224443311 1  1234677899999


Q ss_pred             cCCCCCH
Q 042690           89 FMHNRSI   95 (266)
Q Consensus        89 ~~~~~~L   95 (266)
                      |++|.++
T Consensus       112 ~i~G~~~  118 (346)
T 2q83_A          112 WIEGRPF  118 (346)
T ss_dssp             CCCCBCC
T ss_pred             eecCccC
Confidence            9998543


No 269
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=89.93  E-value=0.029  Score=45.98  Aligned_cols=78  Identities=12%  Similarity=-0.040  Sum_probs=43.4

Q ss_pred             hhcCccccceeecC--CCEEEEeecCcceeeccccccccccccCCCCcCCccccC------CCC--------CCcccchh
Q 042690          119 WRTRALACRILLHD--YFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFR------NMP--------VTVKVDVY  182 (266)
Q Consensus       119 ~~~~~~h~nili~~--~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~--------~~~~~Di~  182 (266)
                      .|+++.+.|+++++  .+.+.++||+.+..............  ...-..|+...      +..        .....+.|
T Consensus       194 ~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~--~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~  271 (304)
T 3sg8_A          194 IHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLME--DDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYW  271 (304)
T ss_dssp             ECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCC--TTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred             EeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHh--hccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence            45555556999998  55678999999876432111110000  00001222111      000        11225789


Q ss_pred             hHHHHHHHHHhCCCcc
Q 042690          183 SFGVMLLEIISCRCVE  198 (266)
Q Consensus       183 slG~i~~~l~tg~~p~  198 (266)
                      +++.++|.+.+|..++
T Consensus       272 ~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          272 SFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHcCCHHH
Confidence            9999999999987655


No 270
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=83.83  E-value=2.9  Score=33.56  Aligned_cols=65  Identities=17%  Similarity=0.168  Sum_probs=43.8

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH--------------HHhhhcCCC---ceeeeeeEEEeCCeEEEEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD--------------KVVHVAHHK---NLVCLLGYHIEQECRLLVY   87 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~--------------~~l~~~~h~---~iv~~~~~~~~~~~~~lv~   87 (266)
                      ++...+.+|.|..+.||+...  .+++.+.+|+-.              ..|+.+.-.   -+.+++++  +  ..++||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l--~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~   89 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVEL--ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAM   89 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEE--TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEE
T ss_pred             CeEEEEecCCCCCeEEEEEEE--CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEE
Confidence            567788999999999999998  477888888621              245544321   23444443  2  236899


Q ss_pred             EcCCCCCH
Q 042690           88 KFMHNRSI   95 (266)
Q Consensus        88 e~~~~~~L   95 (266)
                      ||.+++..
T Consensus        90 e~l~~~~~   97 (288)
T 3f7w_A           90 EWVDERPP   97 (288)
T ss_dssp             ECCCCCCC
T ss_pred             EeecccCC
Confidence            99987543


No 271
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=78.85  E-value=4.4  Score=32.66  Aligned_cols=28  Identities=11%  Similarity=-0.034  Sum_probs=19.5

Q ss_pred             hhcCccccceeecCCCEEEEeecCcceee
Q 042690          119 WRTRALACRILLHDYFTVETSDLGLAKLL  147 (266)
Q Consensus       119 ~~~~~~h~nili~~~~~~~l~Dfg~a~~~  147 (266)
                      .|++..+.|++ ..++.+.++||..+...
T Consensus       176 ~HgDl~~~Nil-~~~~~~~lID~e~a~~g  203 (301)
T 3dxq_A          176 CHCDPLCENFL-DTGERMWIVDWEYSGMN  203 (301)
T ss_dssp             ECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred             eccCCCcCCEE-ECCCCEEEEecccccCC
Confidence            34444445777 66677899999988764


No 272
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.29  E-value=0.83  Score=39.89  Aligned_cols=48  Identities=2%  Similarity=-0.027  Sum_probs=18.1

Q ss_pred             eeeeccCCCcceEEEEEEEcCCCcceeee------eeHHH----------------HhhhcCCCceeeeeeEEE
Q 042690           27 YSLKKPCGGSFSTVYTGVLAPGDKTNIGV------KKLDK----------------VVHVAHHKNLVCLLGYHI   78 (266)
Q Consensus        27 ~~~~~ig~G~~g~V~~~~~~~~~~~~vai------K~~~~----------------~l~~~~h~~iv~~~~~~~   78 (266)
                      .+.++||   ||.||+|.+. ....+||+      |...+                +++..+|||+++.+++..
T Consensus       145 ~l~~~lG---fG~v~~g~~~-~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAY-KKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             CSTTTSS---BCCC----------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cccccCC---chhhhccccc-ccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            3455665   9999999985 33457888      65442                344568999999988864


No 273
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=63.00  E-value=9.3  Score=31.45  Aligned_cols=72  Identities=6%  Similarity=-0.033  Sum_probs=43.8

Q ss_pred             eeeeecc-CCCcceEEEEEEEc---CC--CcceeeeeeH-----------------HHHhhhcC-C--CceeeeeeEEEe
Q 042690           26 IYSLKKP-CGGSFSTVYTGVLA---PG--DKTNIGVKKL-----------------DKVVHVAH-H--KNLVCLLGYHIE   79 (266)
Q Consensus        26 ~~~~~~i-g~G~~g~V~~~~~~---~~--~~~~vaiK~~-----------------~~~l~~~~-h--~~iv~~~~~~~~   79 (266)
                      +...+.| +.|....+|+....   ++  ++..+++|..                 ...++.+. +  -.+.+++.++.+
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~  101 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETT  101 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECS
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccC
Confidence            4556788 88888899987642   00  1445555532                 23444443 2  245667777655


Q ss_pred             C---CeEEEEEEcCCCCCHHH
Q 042690           80 Q---ECRLLVYKFMHNRSISS   97 (266)
Q Consensus        80 ~---~~~~lv~e~~~~~~L~~   97 (266)
                      .   +..++||||++|.++.+
T Consensus       102 ~~~~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          102 GDVLGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             STTTSSCEEEEECCCCBCCCB
T ss_pred             CCccCCceEEEEecCCCChhh
Confidence            4   35689999999877654


No 274
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=45.92  E-value=18  Score=33.26  Aligned_cols=30  Identities=13%  Similarity=-0.014  Sum_probs=26.0

Q ss_pred             HHhhhcCcccc-ceeecCCCEEEEeecCcce
Q 042690          116 RDCWRTRALAC-RILLHDYFTVETSDLGLAK  145 (266)
Q Consensus       116 ~~~~~~~~~h~-nili~~~~~~~l~Dfg~a~  145 (266)
                      .++.+.++-|. ||+|+.+|.+.-+|||..-
T Consensus       545 ~YILGlGDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          545 TYLLGVGDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             HHHHTCCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             HHHccCCCCCCcceEEeCCCCEEEEeehhhh
Confidence            67777777776 9999999999999999874


No 275
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=45.80  E-value=9.9  Score=31.26  Aligned_cols=30  Identities=20%  Similarity=0.169  Sum_probs=21.4

Q ss_pred             hhhcCccccceeecCCCEEEEeecCcceee
Q 042690          118 CWRTRALACRILLHDYFTVETSDLGLAKLL  147 (266)
Q Consensus       118 ~~~~~~~h~nili~~~~~~~l~Dfg~a~~~  147 (266)
                      +.|.++.+.|+++++++.+.++||+.+...
T Consensus       224 l~HgDl~~~Nil~~~~~~~~vIDwe~a~~g  253 (357)
T 3ats_A          224 LLWGDARVGNVLYRDFQPVAVLDWEMVALG  253 (357)
T ss_dssp             EECSSCSGGGEEEETTEEEEECCGGGCEEE
T ss_pred             EEeCCCCCCeEEEeCCcEEEEEcccccccC
Confidence            344455555999996556789999998763


No 276
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=45.58  E-value=11  Score=30.52  Aligned_cols=67  Identities=9%  Similarity=-0.041  Sum_probs=35.9

Q ss_pred             ceeeeeccCCCcceEEEEEEEcCCCcceeeeeeHH------------HHhhhcCCCc--eeeeeeE------EEeCCeEE
Q 042690           25 HIYSLKKPCGGSFSTVYTGVLAPGDKTNIGVKKLD------------KVVHVAHHKN--LVCLLGY------HIEQECRL   84 (266)
Q Consensus        25 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~~------------~~l~~~~h~~--iv~~~~~------~~~~~~~~   84 (266)
                      .....+.|+.|....+|+....  ++ .+++|...            .+++.+...+  +.+++..      ....+..+
T Consensus        23 ~~~~~~~i~~G~~n~~~~v~~~--~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~   99 (322)
T 2ppq_A           23 SLTSYKGIAEGVENSNFLLHTT--KD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPA   99 (322)
T ss_dssp             CEEEEEEECC---EEEEEEEES--SC-CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEE
T ss_pred             cceEeeccCCCcccceEEEEeC--Cc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEE
Confidence            4556678888888899998753  33 56666432            1333322111  2233211      22346678


Q ss_pred             EEEEcCCCCC
Q 042690           85 LVYKFMHNRS   94 (266)
Q Consensus        85 lv~e~~~~~~   94 (266)
                      ++|+|++|..
T Consensus       100 ~l~~~l~G~~  109 (322)
T 2ppq_A          100 ALISFLEGMW  109 (322)
T ss_dssp             EEEECCCCBC
T ss_pred             EEEEeCCCcC
Confidence            9999998854


No 277
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=45.26  E-value=9.6  Score=31.07  Aligned_cols=29  Identities=24%  Similarity=0.013  Sum_probs=21.3

Q ss_pred             hcCccccceeecCC----CEEEEeecCcceeec
Q 042690          120 RTRALACRILLHDY----FTVETSDLGLAKLLM  148 (266)
Q Consensus       120 ~~~~~h~nili~~~----~~~~l~Dfg~a~~~~  148 (266)
                      |+++...|++++.+    +.+.++||+.+....
T Consensus       187 HgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~  219 (333)
T 3csv_A          187 HRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH  219 (333)
T ss_dssp             CSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred             eCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence            44444459999874    678999999988753


No 278
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=43.01  E-value=17  Score=32.80  Aligned_cols=30  Identities=13%  Similarity=-0.010  Sum_probs=25.6

Q ss_pred             HHhhhcCcccc-ceeecCCCEEEEeecCcce
Q 042690          116 RDCWRTRALAC-RILLHDYFTVETSDLGLAK  145 (266)
Q Consensus       116 ~~~~~~~~~h~-nili~~~~~~~l~Dfg~a~  145 (266)
                      .++.+.++=|. ||+++.+|.+.-+|||..-
T Consensus       471 ~YILGigDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          471 TYILGVGDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             HHHHTCCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             heeeeccCCCCcceeEcCCCCEeeeehHHhh
Confidence            66677777776 9999999999999999873


No 279
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=37.30  E-value=17  Score=30.88  Aligned_cols=28  Identities=14%  Similarity=0.063  Sum_probs=21.5

Q ss_pred             hcCccccceeecCC------CEEEEeecCcceee
Q 042690          120 RTRALACRILLHDY------FTVETSDLGLAKLL  147 (266)
Q Consensus       120 ~~~~~h~nili~~~------~~~~l~Dfg~a~~~  147 (266)
                      |++....|++++.+      +.+.++||..+...
T Consensus       248 H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~~  281 (401)
T 3f2s_A          248 HNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN  281 (401)
T ss_dssp             CSCCCGGGEEEETTGGGCSSSCEEECCCTTCEEE
T ss_pred             eccCCcccEEEcCCcccCcccceEEEeeccCCcC
Confidence            44555569999877      78999999988753


No 280
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=37.21  E-value=1.4e+02  Score=22.90  Aligned_cols=106  Identities=10%  Similarity=0.094  Sum_probs=59.4

Q ss_pred             hcCCCceeeeeeEEEeCCeEEEEEEcCCC-CCHHHHHhhcCCCCHHHHHHHHHHHhh------hcC---cccc-ceeecC
Q 042690           64 VAHHKNLVCLLGYHIEQECRLLVYKFMHN-RSISSLLYECLRPTWQQRMQDCIRDCW------RTR---ALAC-RILLHD  132 (266)
Q Consensus        64 ~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~l~~~~~~~~------~~~---~~h~-nili~~  132 (266)
                      ...||++  -..+..+++.+.+.++.-++ .++. .++.   .+...++..+.....      ..+   ++|+ |++++.
T Consensus        46 ~~~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~~---~~~~eKlrll~nl~~L~~~~~~~r~tf~l~P~NL~f~~  119 (219)
T 4ano_A           46 KEVDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIRK---TTLLSRIRAAIHLVSKVKHHSARRLIFIVCPENLMFNR  119 (219)
T ss_dssp             GGSCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHHT---SCHHHHHHHHHHHHHHHSSCCSSSEECCCCGGGEEECT
T ss_pred             hccCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHHh---cCHHHHHHHHHHHHHHHHHhhhCceeEEEeCceEEEeC
Confidence            3457887  55555777777777776533 3444 3332   444444444442221      111   3444 999999


Q ss_pred             CCEEEEeecCcceeeccccccccccccCCCCcCCccccCCCCCCcccchh-hHHHHHHHHHhCCCccc
Q 042690          133 YFTVETSDLGLAKLLMINQTQTLTGMRETKGYLPPEWFRNMPVTVKVDVY-SFGVMLLEIISCRCVER  199 (266)
Q Consensus       133 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~-slG~i~~~l~tg~~p~~  199 (266)
                      ++.+++.=.|+-..                  ++|..     + ...|.| .+=|++..++.++..|.
T Consensus       120 ~~~p~i~hRGi~~~------------------lpP~e-----~-~ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          120 ALEPFFLHVGVKES------------------LPPDE-----W-DDERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             TCCEEESCCEETTT------------------BSSCS-----C-CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             CCcEEEEEcCCccc------------------CCCCC-----C-CHHHHHHHHHHHHHHHHcCCCCHH
Confidence            99999886665322                  22221     1 123433 56777788888766553


No 281
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=36.97  E-value=28  Score=33.18  Aligned_cols=30  Identities=10%  Similarity=-0.004  Sum_probs=25.7

Q ss_pred             HHhhhcCcccc-ceeecCCCEEEEeecCcce
Q 042690          116 RDCWRTRALAC-RILLHDYFTVETSDLGLAK  145 (266)
Q Consensus       116 ~~~~~~~~~h~-nili~~~~~~~l~Dfg~a~  145 (266)
                      .++.+.++-|. ||+++.+|.+.-+|||..-
T Consensus       782 ~YILGlgDRH~~NILid~tG~v~HIDFG~~f  812 (940)
T 2wxf_A          782 TYVLGIGDRHSDNIMIRESGQLFHIDFGHFL  812 (940)
T ss_dssp             HHHHTCCCCCGGGEEEETTSCEEECCCCCCT
T ss_pred             HHHhccCCCCcccEEEecCCCEEEEeehhhh
Confidence            66777777776 9999999999999999864


No 282
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=35.80  E-value=19  Score=29.83  Aligned_cols=63  Identities=11%  Similarity=0.069  Sum_probs=32.8

Q ss_pred             eeeccCCCcceEEEEEEEcCC-------CcceeeeeeHH-------------HHhhhcCCCc-eeeeeeEEEeCCeEEEE
Q 042690           28 SLKKPCGGSFSTVYTGVLAPG-------DKTNIGVKKLD-------------KVVHVAHHKN-LVCLLGYHIEQECRLLV   86 (266)
Q Consensus        28 ~~~~ig~G~~g~V~~~~~~~~-------~~~~vaiK~~~-------------~~l~~~~h~~-iv~~~~~~~~~~~~~lv   86 (266)
                      ..+.++.|....+|+.....+       .+..+.+|...             .+++.+...+ ..++++..  ++  ++|
T Consensus        37 ~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v  112 (369)
T 3c5i_A           37 RVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRI  112 (369)
T ss_dssp             EEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEE
T ss_pred             EEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--CC--cEE
Confidence            356778888889998875310       12456666532             2444443222 34555443  22  689


Q ss_pred             EEcCCCCC
Q 042690           87 YKFMHNRS   94 (266)
Q Consensus        87 ~e~~~~~~   94 (266)
                      |||++|.+
T Consensus       113 ~e~i~G~~  120 (369)
T 3c5i_A          113 EEWLYGDP  120 (369)
T ss_dssp             EECCCSEE
T ss_pred             EEEecCCc
Confidence            99998743


No 283
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=34.94  E-value=32  Score=32.93  Aligned_cols=30  Identities=10%  Similarity=-0.031  Sum_probs=25.2

Q ss_pred             HHhhhcCcccc-ceeecCCCEEEEeecCcce
Q 042690          116 RDCWRTRALAC-RILLHDYFTVETSDLGLAK  145 (266)
Q Consensus       116 ~~~~~~~~~h~-nili~~~~~~~l~Dfg~a~  145 (266)
                      .++.+.++-|. ||+|+.+|.+.-+|||..-
T Consensus       798 ~YILGigDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          798 TFVLGIGDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             HHHTTCCCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             HHHccccCCCCcceEEecCCCEEEEeehhhh
Confidence            66677777776 9999999999999999975


No 284
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=34.70  E-value=20  Score=30.13  Aligned_cols=28  Identities=14%  Similarity=0.041  Sum_probs=20.9

Q ss_pred             hcCccccceeecCC----CEEEEeecCcceee
Q 042690          120 RTRALACRILLHDY----FTVETSDLGLAKLL  147 (266)
Q Consensus       120 ~~~~~h~nili~~~----~~~~l~Dfg~a~~~  147 (266)
                      |++....|++++.+    +.+.++||..+...
T Consensus       224 H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~  255 (379)
T 3feg_A          224 HNDIQEGNILLLSEPENADSLMLVDFEYSSYN  255 (379)
T ss_dssp             CSCCCGGGEEEESCC---CCEEECCCTTCEEE
T ss_pred             cCCCCCCeEEEcCCCCccCcEEEEecccCCcC
Confidence            44444459999876    68899999988763


No 285
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=34.57  E-value=16  Score=30.00  Aligned_cols=27  Identities=15%  Similarity=0.062  Sum_probs=20.5

Q ss_pred             cCccccceeecCCCEEEEeecCcceee
Q 042690          121 TRALACRILLHDYFTVETSDLGLAKLL  147 (266)
Q Consensus       121 ~~~~h~nili~~~~~~~l~Dfg~a~~~  147 (266)
                      ++....|++++.++.+.++||+.+...
T Consensus       211 gD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          211 SDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             SCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             CCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            333344999988888999999888764


No 286
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=34.44  E-value=33  Score=33.30  Aligned_cols=30  Identities=10%  Similarity=-0.023  Sum_probs=25.7

Q ss_pred             HHhhhcCcccc-ceeecCCCEEEEeecCcce
Q 042690          116 RDCWRTRALAC-RILLHDYFTVETSDLGLAK  145 (266)
Q Consensus       116 ~~~~~~~~~h~-nili~~~~~~~l~Dfg~a~  145 (266)
                      .++.+.++-|. ||+++.+|.+.-+|||..-
T Consensus       934 ~YILGlGDRH~~NILid~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          934 SYVLGIGDRHSDNIMVKKTGQLFHIDFGHIL  964 (1092)
T ss_dssp             HHHTTCCCCCTTTEEECTTSCEEECCCSCCS
T ss_pred             HHHhcCCCCCCccEEEecCCCEEEEeehhhh
Confidence            66677777776 9999999999999999874


No 287
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=33.90  E-value=15  Score=31.39  Aligned_cols=61  Identities=10%  Similarity=0.156  Sum_probs=35.2

Q ss_pred             eeeccCCCcceEEEEEEEcCC------CcceeeeeeHH------------HHhhhcCCCce-eeeeeEEEeCCeEEEEEE
Q 042690           28 SLKKPCGGSFSTVYTGVLAPG------DKTNIGVKKLD------------KVVHVAHHKNL-VCLLGYHIEQECRLLVYK   88 (266)
Q Consensus        28 ~~~~ig~G~~g~V~~~~~~~~------~~~~vaiK~~~------------~~l~~~~h~~i-v~~~~~~~~~~~~~lv~e   88 (266)
                      .++.|+.|-...+|++....+      .+..+.+|+..            .+++.+...++ .++++.+  .+  .+|+|
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~--~~--g~v~e  152 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIF--SG--GRLEE  152 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEE--TT--EEEEC
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEe--CC--CEEEE
Confidence            456788888889999886311      23566666541            23333332222 4555543  22  28899


Q ss_pred             cCCC
Q 042690           89 FMHN   92 (266)
Q Consensus        89 ~~~~   92 (266)
                      |++|
T Consensus       153 ~l~G  156 (429)
T 1nw1_A          153 YIPS  156 (429)
T ss_dssp             CCCE
T ss_pred             EeCC
Confidence            9976


No 288
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=33.79  E-value=21  Score=30.91  Aligned_cols=62  Identities=11%  Similarity=0.139  Sum_probs=36.4

Q ss_pred             eeeccCCCcceEEEEEEEcCCCcceeeeeeH-------------HHHhhhcCCCce-eeeeeEEEeCCeEEEEEEcCCCC
Q 042690           28 SLKKPCGGSFSTVYTGVLAPGDKTNIGVKKL-------------DKVVHVAHHKNL-VCLLGYHIEQECRLLVYKFMHNR   93 (266)
Q Consensus        28 ~~~~ig~G~~g~V~~~~~~~~~~~~vaiK~~-------------~~~l~~~~h~~i-v~~~~~~~~~~~~~lv~e~~~~~   93 (266)
                      .++.|+.|-...+|++... +.+..+.+|+.             ..+++.+...++ .++++.+  .+.  .||||++|.
T Consensus       112 ~i~~lsgG~tN~~y~v~~~-~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~~G--~v~e~I~G~  186 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDM-SKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF--TNG--RIEEFMDGY  186 (458)
T ss_dssp             EEEEECC--CEEEEEEEET-TTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE--TTE--EEEECCCSE
T ss_pred             EEEEcCCCeEeEEEEEEEC-CCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe--CCe--EEEEeeCCc
Confidence            3567888888899998863 12355666643             235666654333 4566655  332  599999874


Q ss_pred             C
Q 042690           94 S   94 (266)
Q Consensus        94 ~   94 (266)
                      +
T Consensus       187 ~  187 (458)
T 2qg7_A          187 A  187 (458)
T ss_dssp             E
T ss_pred             c
Confidence            3


No 289
>2c6y_A Forkhead box protein K2; transcription regulation, DNA-binding domain, forkhead transcription factors, interleukin enhancer binding factor; 2.4A {Homo sapiens} SCOP: a.4.5.14 PDB: 1jxs_A 2a3s_A 2d2w_A
Probab=30.21  E-value=50  Score=22.42  Aligned_cols=33  Identities=9%  Similarity=0.013  Sum_probs=27.1

Q ss_pred             cchHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042690          207 LEKPVMIAIQFVKEKPPLRPSLRIVALMLQSIL  239 (266)
Q Consensus       207 ~~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~  239 (266)
                      ......||..++...|..|-++.||.+.++...
T Consensus        18 p~SYa~LI~~AI~~sp~~~LtL~eIY~~I~~~f   50 (111)
T 2c6y_A           18 PYSYAQLIVQAITMAPDKQLTLNGIYTHITKNY   50 (111)
T ss_dssp             SSCHHHHHHHHHHTSTTSCEEHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHhCCCCCCcHHHHHHHHHHcC
Confidence            345677888888889999999999999888764


No 290
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=27.14  E-value=28  Score=28.06  Aligned_cols=26  Identities=23%  Similarity=-0.023  Sum_probs=18.6

Q ss_pred             hcCccccceeecCCCEEEEeecCcceee
Q 042690          120 RTRALACRILLHDYFTVETSDLGLAKLL  147 (266)
Q Consensus       120 ~~~~~h~nili~~~~~~~l~Dfg~a~~~  147 (266)
                      |++....||+++ + .+.++||+.+...
T Consensus       199 HgD~~~~Nil~~-~-~~~lIDfe~a~~g  224 (328)
T 1zyl_A          199 HGDCHAGNILWR-D-GPMFVDLDDARNG  224 (328)
T ss_dssp             CSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred             eCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence            334444489998 4 7899999888654


No 291
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=26.81  E-value=52  Score=31.88  Aligned_cols=30  Identities=13%  Similarity=-0.055  Sum_probs=25.4

Q ss_pred             HHhhhcCcccc-ceeecCCCEEEEeecCcce
Q 042690          116 RDCWRTRALAC-RILLHDYFTVETSDLGLAK  145 (266)
Q Consensus       116 ~~~~~~~~~h~-nili~~~~~~~l~Dfg~a~  145 (266)
                      .++.+.++=|. ||+++.+|.+.-+|||..-
T Consensus       931 ~YiLgigDRH~~NILid~tG~v~HIDFG~~f  961 (1091)
T 3hhm_A          931 TFILGIGDRHNSNIMVKDDGQLFHIDFGHFL  961 (1091)
T ss_dssp             HHHHTCCCCCTTTEEEETTSCEEECCCCCCS
T ss_pred             EEEEeecCCCCcceEEeCCCCEEEEeehhhh
Confidence            66667777776 9999999999999999974


No 292
>3bpy_A FORK head domain, forkhead transcription factor FOXO4, DNA binding domain; forkhead BOX, winged helix; 1.87A {Homo sapiens}
Probab=26.61  E-value=74  Score=20.34  Aligned_cols=31  Identities=13%  Similarity=0.105  Sum_probs=26.7

Q ss_pred             hHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042690          209 KPVMIAIQFVKEKPPLRPSLRIVALMLQSIL  239 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~  239 (266)
                      ....+|.+++...|+.|-++.||.+.++...
T Consensus         9 SY~~LI~~Ai~~sp~~~ltL~eIY~~i~~~f   39 (85)
T 3bpy_A            9 SYAELISQAIESAPEKRLTLAQIYEWMVRTV   39 (85)
T ss_dssp             CHHHHHHHHHHHSTTSCBCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHhCCcCCccHHHHHHHHHHhC
Confidence            4677888888899999999999999988763


No 293
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=25.73  E-value=2.4e+02  Score=22.77  Aligned_cols=60  Identities=13%  Similarity=0.218  Sum_probs=34.7

Q ss_pred             CCCcceEEEEEEEcCCCcceeeeeeHH--------HHhhhcC---CCceeeeeeE------EEeCCeEEEEEEcCCCCCH
Q 042690           33 CGGSFSTVYTGVLAPGDKTNIGVKKLD--------KVVHVAH---HKNLVCLLGY------HIEQECRLLVYKFMHNRSI   95 (266)
Q Consensus        33 g~G~~g~V~~~~~~~~~~~~vaiK~~~--------~~l~~~~---h~~iv~~~~~------~~~~~~~~lv~e~~~~~~L   95 (266)
                      |.|....||+....  ++ .+++|+..        ..++.+.   -|.+.+++..      ....+..+++|+|++|..+
T Consensus        32 G~g~~N~vy~v~~~--~g-~~vLK~~~~~~~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~~~  108 (339)
T 3i1a_A           32 GADTNAFAYQADSE--SK-SYFIKLKYGYHDEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNG  108 (339)
T ss_dssp             TSCSSCEEEEEECS--SC-EEEEEEEECSSCCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCCBT
T ss_pred             cCccccceEEEEeC--CC-CEEEEEecCccchHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCCcC
Confidence            33446789988752  44 67777533        2333332   2224444432      2345678999999998765


No 294
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=25.66  E-value=35  Score=28.70  Aligned_cols=29  Identities=14%  Similarity=0.071  Sum_probs=21.5

Q ss_pred             hhcCccccceeec------CCCEEEEeecCcceee
Q 042690          119 WRTRALACRILLH------DYFTVETSDLGLAKLL  147 (266)
Q Consensus       119 ~~~~~~h~nili~------~~~~~~l~Dfg~a~~~  147 (266)
                      .|++....||++.      .++.+.++||..|...
T Consensus       247 cHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n  281 (401)
T 3g15_A          247 CHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN  281 (401)
T ss_dssp             ECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred             EEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence            3555556699984      4567999999998764


No 295
>2hdc_A Protein (transcription factor); structure, dyanamics, genesis, winged helix protein, protein/DNA complex; HET: DNA; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=22.31  E-value=1.1e+02  Score=20.06  Aligned_cols=30  Identities=7%  Similarity=0.121  Sum_probs=24.7

Q ss_pred             hHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042690          209 KPVMIAIQFVKEKPPLRPSLRIVALMLQSI  238 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~~~il~~l~~~  238 (266)
                      ....+|..++...|+.|-+..||.+.++..
T Consensus         6 SY~~LI~~AI~~sp~~~ltL~eIY~~i~~~   35 (97)
T 2hdc_A            6 SYIALITMAILQSPQKKLTLSGICEFISNR   35 (97)
T ss_dssp             CHHHHHHHHHHTCTTTCBCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCCCHHHHHHHHHHh
Confidence            356778888888899999999999888764


No 296
>1vtn_C HNF-3/FORK head DNA-recognition motif; protein-DNA complex, double helix, transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens} PDB: 1d5v_A
Probab=21.92  E-value=1.1e+02  Score=20.33  Aligned_cols=31  Identities=6%  Similarity=0.116  Sum_probs=25.4

Q ss_pred             hHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042690          209 KPVMIAIQFVKEKPPLRPSLRIVALMLQSIL  239 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~  239 (266)
                      ....+|...+...|..|-++.||.+.++...
T Consensus         7 SY~~LI~~AI~~sp~~~LtL~eIY~~I~~~f   37 (102)
T 1vtn_C            7 SYISLITMAIQQAPGKMLTLSEIYQWIMDLF   37 (102)
T ss_dssp             CHHHHHHHHHHTSTTSCBCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHhCCCCCCcHHHHHHHHHHcC
Confidence            4567788888888999999999999887753


No 297
>3l2c_A Forkhead box protein O4; winged helix, transcription-DNA COMP; 1.87A {Homo sapiens} SCOP: a.4.5.14 PDB: 3co6_C*
Probab=21.86  E-value=96  Score=20.92  Aligned_cols=32  Identities=13%  Similarity=0.120  Sum_probs=26.8

Q ss_pred             chHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042690          208 EKPVMIAIQFVKEKPPLRPSLRIVALMLQSIL  239 (266)
Q Consensus       208 ~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~  239 (266)
                      .....||.+++...|..|-++.||.+.++...
T Consensus        27 ySY~~LI~~AI~~sp~~~LtL~eIY~~I~~~f   58 (110)
T 3l2c_A           27 QSYAELISQAIESAPEKRLTLAQIYEWMVRTV   58 (110)
T ss_dssp             CCHHHHHHHHHHHSTTSCBCHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHhCCccCcCHHHHHHHHHHhC
Confidence            45677888888889999999999999988763


No 298
>1kdx_B CREB; complex (transcription activator/CO-activator), protein- protein interaction, phosphoserine recognition; HET: SEP; NMR {Rattus norvegicus}
Probab=21.65  E-value=54  Score=16.12  Aligned_cols=15  Identities=40%  Similarity=0.392  Sum_probs=12.1

Q ss_pred             CCCCCHHHHHHHHHH
Q 042690          223 PLRPSLRIVALMLQS  237 (266)
Q Consensus       223 ~~Rps~~~il~~l~~  237 (266)
                      .+|||...++..|.+
T Consensus        11 ~rrpSYrkIlndls~   25 (28)
T 1kdx_B           11 SRRPSYRKILNDLSS   25 (28)
T ss_dssp             TTSTHHHHHHHHHHH
T ss_pred             hcCchHHHHHHhhcc
Confidence            468999999888865


No 299
>3coa_C Forkhead box protein O1; winged helix, forkhead domain, chromosomal rearrangement; HET: DNA; 2.20A {Homo sapiens} PDB: 3co7_C* 2k86_A 2uzk_A
Probab=20.65  E-value=1.1e+02  Score=20.87  Aligned_cols=31  Identities=6%  Similarity=-0.033  Sum_probs=26.0

Q ss_pred             chHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042690          208 EKPVMIAIQFVKEKPPLRPSLRIVALMLQSI  238 (266)
Q Consensus       208 ~~~~~l~~~cl~~~p~~Rps~~~il~~l~~~  238 (266)
                      .....||.+.+...|..|-++.||.+.++..
T Consensus        14 ~SYa~LI~~AI~~sp~~~LTL~eIY~~I~~~   44 (117)
T 3coa_C           14 LSYADLITKAIESSAEKRLTLSQIYEWMVKS   44 (117)
T ss_dssp             CCHHHHHHHHHHTSTTSCBCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCCCccHHHHHHHHHHh
Confidence            3566788888888899999999999998876


No 300
>2a07_F Forkhead box protein P2; double-helix, swapping, homodimer, monomer, winged-helix, magnesium, transcription/DNA complex; 1.90A {Homo sapiens} SCOP: a.4.5.14 PDB: 2as5_F 2kiu_A 3qrf_F
Probab=20.58  E-value=1.1e+02  Score=19.89  Aligned_cols=31  Identities=10%  Similarity=0.031  Sum_probs=25.7

Q ss_pred             hHHHHHHHhhhcCCCCCCCHHHHHHHHHHHH
Q 042690          209 KPVMIAIQFVKEKPPLRPSLRIVALMLQSIL  239 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~~~il~~l~~~~  239 (266)
                      ....+|...+...|+.|-+..||.+.++..-
T Consensus         7 SY~~LI~~AI~~sp~~~ltL~eIY~~i~~~f   37 (93)
T 2a07_F            7 TYATLIRQAIMESSDRQLTLNEIYSWFTRTF   37 (93)
T ss_dssp             CHHHHHHHHHHHSTTSCBCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCccHHHHHHHHHHhC
Confidence            3567788888889999999999999888754


No 301
>2hfh_A Genesis, HFH-2; HNF-3 homologues, winged helix protein; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=20.08  E-value=1.1e+02  Score=20.68  Aligned_cols=30  Identities=7%  Similarity=0.121  Sum_probs=24.5

Q ss_pred             hHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 042690          209 KPVMIAIQFVKEKPPLRPSLRIVALMLQSI  238 (266)
Q Consensus       209 ~~~~l~~~cl~~~p~~Rps~~~il~~l~~~  238 (266)
                      ....+|...+...|+.|-++.||.+.++.-
T Consensus         7 SYa~LI~~AI~~sp~~~LtL~eIY~~I~~~   36 (109)
T 2hfh_A            7 SYIALITMAILQSPQKKLTLSGICEFISNR   36 (109)
T ss_dssp             CHHHHHHHHHHTCSSSCBCHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHhCCCCCCcHHHHHHHHHHh
Confidence            456778888888899999999999888764


Done!