Query 042694
Match_columns 554
No_of_seqs 455 out of 3175
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 08:34:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042694.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042694hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02503 fatty acyl-CoA reduct 100.0 8.9E-85 1.9E-89 696.4 46.1 547 1-551 1-605 (605)
2 KOG1221 Acyl-CoA reductase [Li 100.0 3.2E-83 7E-88 651.5 36.0 428 102-554 4-458 (467)
3 PLN02996 fatty acyl-CoA reduct 100.0 2.2E-69 4.7E-74 575.8 40.9 432 102-548 3-491 (491)
4 PF07993 NAD_binding_4: Male s 100.0 5.4E-39 1.2E-43 315.1 7.8 238 115-377 1-249 (249)
5 COG3320 Putative dehydrogenase 100.0 2.4E-37 5.2E-42 303.7 14.1 274 111-416 1-289 (382)
6 PF01073 3Beta_HSD: 3-beta hyd 100.0 8.1E-31 1.8E-35 260.3 20.3 263 114-424 1-274 (280)
7 TIGR03443 alpha_am_amid L-amin 100.0 8.1E-31 1.8E-35 315.9 21.8 367 25-417 856-1262(1389)
8 PRK15181 Vi polysaccharide bio 100.0 5.8E-30 1.3E-34 263.7 21.2 266 108-420 13-284 (348)
9 COG1088 RfbB dTDP-D-glucose 4, 100.0 1.1E-29 2.3E-34 239.9 17.9 259 111-423 1-267 (340)
10 COG1087 GalE UDP-glucose 4-epi 100.0 2.1E-28 4.5E-33 232.5 20.1 257 111-421 1-274 (329)
11 KOG1502 Flavonol reductase/cin 100.0 5.6E-28 1.2E-32 236.4 18.9 266 109-423 5-276 (327)
12 TIGR01746 Thioester-redct thio 100.0 3E-27 6.5E-32 245.1 20.1 272 112-421 1-281 (367)
13 PLN02427 UDP-apiose/xylose syn 100.0 5.2E-27 1.1E-31 245.4 21.5 284 109-420 13-308 (386)
14 PRK07201 short chain dehydroge 99.9 1.1E-26 2.5E-31 259.6 23.9 266 111-422 1-271 (657)
15 PLN02260 probable rhamnose bio 99.9 6.7E-27 1.5E-31 261.0 22.0 266 106-422 2-273 (668)
16 PRK10217 dTDP-glucose 4,6-dehy 99.9 1.3E-26 2.9E-31 239.7 20.6 260 110-422 1-274 (355)
17 PLN02572 UDP-sulfoquinovose sy 99.9 2.2E-26 4.7E-31 243.2 21.9 280 106-421 43-363 (442)
18 PRK11908 NAD-dependent epimera 99.9 3.8E-26 8.1E-31 235.5 21.8 271 110-423 1-276 (347)
19 PLN02166 dTDP-glucose 4,6-dehy 99.9 1.6E-26 3.4E-31 243.2 18.2 252 109-421 119-377 (436)
20 PLN02206 UDP-glucuronate decar 99.9 3.9E-26 8.5E-31 240.6 18.0 255 108-420 117-375 (442)
21 PRK08125 bifunctional UDP-gluc 99.9 1.3E-25 2.8E-30 249.5 22.1 277 102-422 307-589 (660)
22 TIGR01181 dTDP_gluc_dehyt dTDP 99.9 1.4E-25 3E-30 228.0 19.8 255 112-422 1-264 (317)
23 PLN02695 GDP-D-mannose-3',5'-e 99.9 8E-26 1.7E-30 234.4 17.9 260 109-421 20-284 (370)
24 PLN02214 cinnamoyl-CoA reducta 99.9 1.3E-25 2.9E-30 230.5 19.4 259 108-420 8-270 (342)
25 PLN02662 cinnamyl-alcohol dehy 99.9 1.7E-25 3.7E-30 228.2 19.5 265 109-421 3-271 (322)
26 PLN02986 cinnamyl-alcohol dehy 99.9 2.3E-25 5E-30 227.2 19.6 263 109-420 4-271 (322)
27 PLN00198 anthocyanidin reducta 99.9 4.1E-25 8.9E-30 226.9 21.5 266 108-420 7-285 (338)
28 PRK10084 dTDP-glucose 4,6 dehy 99.9 2.4E-25 5.1E-30 230.1 19.6 257 111-421 1-280 (352)
29 KOG1430 C-3 sterol dehydrogena 99.9 3.1E-25 6.8E-30 221.5 19.1 263 109-423 3-272 (361)
30 TIGR02622 CDP_4_6_dhtase CDP-g 99.9 1.2E-24 2.5E-29 224.5 21.9 265 107-421 1-279 (349)
31 TIGR01472 gmd GDP-mannose 4,6- 99.9 4.8E-25 1E-29 226.9 17.8 259 111-421 1-272 (343)
32 PLN02989 cinnamyl-alcohol dehy 99.9 1.4E-24 3E-29 221.8 20.9 265 109-420 4-272 (325)
33 PRK11150 rfaD ADP-L-glycero-D- 99.9 5.1E-25 1.1E-29 223.3 16.3 246 113-420 2-256 (308)
34 PLN02650 dihydroflavonol-4-red 99.9 2.6E-24 5.6E-29 222.2 20.4 264 110-420 5-273 (351)
35 COG0451 WcaG Nucleoside-diphos 99.9 1.6E-24 3.4E-29 220.0 17.8 250 112-423 2-261 (314)
36 PLN02240 UDP-glucose 4-epimera 99.9 4.2E-24 9.2E-29 220.7 21.0 268 108-421 3-292 (352)
37 KOG0747 Putative NAD+-dependen 99.9 2.2E-24 4.8E-29 202.3 14.4 253 108-420 4-269 (331)
38 PRK09987 dTDP-4-dehydrorhamnos 99.9 4.1E-24 8.9E-29 215.5 16.9 228 111-419 1-235 (299)
39 PLN02896 cinnamyl-alcohol dehy 99.9 1.1E-23 2.4E-28 217.7 19.9 268 109-420 9-293 (353)
40 PF01370 Epimerase: NAD depend 99.9 3.5E-24 7.7E-29 208.1 14.4 231 113-398 1-236 (236)
41 COG1086 Predicted nucleoside-d 99.9 1.7E-23 3.7E-28 215.2 19.9 254 100-426 240-503 (588)
42 PLN02686 cinnamoyl-CoA reducta 99.9 1.1E-23 2.4E-28 218.1 18.5 264 108-421 51-326 (367)
43 PLN02653 GDP-mannose 4,6-dehyd 99.9 8.1E-24 1.8E-28 217.5 17.3 259 109-421 5-278 (340)
44 PLN02725 GDP-4-keto-6-deoxyman 99.9 7.5E-24 1.6E-28 214.4 15.8 240 114-421 1-252 (306)
45 TIGR02197 heptose_epim ADP-L-g 99.9 2.5E-23 5.4E-28 211.4 17.7 249 113-422 1-263 (314)
46 PLN02583 cinnamoyl-CoA reducta 99.9 8.1E-23 1.7E-27 205.9 21.0 261 110-424 6-269 (297)
47 PRK10675 UDP-galactose-4-epime 99.9 6.6E-23 1.4E-27 210.6 20.3 264 111-421 1-283 (338)
48 TIGR01214 rmlD dTDP-4-dehydror 99.9 5.5E-23 1.2E-27 206.2 19.0 226 112-422 1-232 (287)
49 PF02719 Polysacc_synt_2: Poly 99.9 4.7E-24 1E-28 207.2 10.7 241 113-423 1-252 (293)
50 CHL00194 ycf39 Ycf39; Provisio 99.9 1.2E-22 2.5E-27 206.7 19.9 224 111-421 1-224 (317)
51 PF03015 Sterile: Male sterili 99.9 3.6E-24 7.7E-29 176.3 6.5 94 446-549 1-94 (94)
52 TIGR03466 HpnA hopanoid-associ 99.9 1.6E-22 3.5E-27 206.6 18.4 250 111-422 1-251 (328)
53 KOG1371 UDP-glucose 4-epimeras 99.9 1E-21 2.2E-26 189.0 21.8 263 110-423 2-288 (343)
54 KOG1429 dTDP-glucose 4-6-dehyd 99.9 4.5E-23 9.8E-28 193.3 11.5 255 109-420 26-283 (350)
55 TIGR03589 PseB UDP-N-acetylglu 99.9 3.9E-22 8.5E-27 203.3 19.0 233 108-418 2-244 (324)
56 TIGR01179 galE UDP-glucose-4-e 99.9 1.6E-21 3.4E-26 199.0 21.9 260 112-421 1-278 (328)
57 PF04321 RmlD_sub_bind: RmlD s 99.9 1.7E-22 3.7E-27 201.8 13.7 229 111-422 1-235 (286)
58 PLN02657 3,8-divinyl protochlo 99.9 1.3E-21 2.9E-26 203.8 16.2 238 108-422 58-300 (390)
59 COG1091 RfbD dTDP-4-dehydrorha 99.9 4.1E-21 8.9E-26 185.6 17.1 223 112-422 2-230 (281)
60 PLN02778 3,5-epimerase/4-reduc 99.9 3.9E-21 8.4E-26 193.4 17.0 221 110-421 9-240 (298)
61 PLN00016 RNA-binding protein; 99.9 2.9E-21 6.3E-26 201.2 16.6 238 109-422 51-295 (378)
62 TIGR01777 yfcH conserved hypot 99.8 2.3E-20 4.9E-25 187.5 17.0 237 113-421 1-244 (292)
63 cd09071 FAR_C C-terminal domai 99.8 3.7E-21 8.1E-26 158.1 6.6 91 447-547 2-92 (92)
64 PRK05865 hypothetical protein; 99.8 2.4E-19 5.1E-24 199.0 18.4 200 111-417 1-201 (854)
65 COG1090 Predicted nucleoside-d 99.8 7.6E-18 1.6E-22 159.0 19.8 234 113-421 1-242 (297)
66 PRK12320 hypothetical protein; 99.8 6.8E-18 1.5E-22 183.7 17.9 201 111-417 1-202 (699)
67 PLN02260 probable rhamnose bio 99.8 1.8E-17 4E-22 185.2 18.0 221 109-419 379-609 (668)
68 KOG2865 NADH:ubiquinone oxidor 99.7 1.4E-17 3E-22 156.4 11.0 242 105-423 56-298 (391)
69 TIGR03649 ergot_EASG ergot alk 99.7 1.4E-16 3.1E-21 159.6 18.4 209 112-421 1-216 (285)
70 PF13460 NAD_binding_10: NADH( 99.7 1.7E-16 3.6E-21 148.1 17.3 182 113-382 1-182 (183)
71 PLN00141 Tic62-NAD(P)-related 99.7 3.3E-16 7.3E-21 153.9 19.9 234 108-416 15-250 (251)
72 PRK06482 short chain dehydroge 99.7 4.1E-16 9E-21 155.4 17.2 238 110-419 2-263 (276)
73 PRK13394 3-hydroxybutyrate deh 99.7 1.9E-15 4.1E-20 149.3 16.8 228 108-400 5-258 (262)
74 PLN03209 translocon at the inn 99.7 4.3E-15 9.3E-20 157.4 19.9 241 106-413 76-322 (576)
75 PRK08263 short chain dehydroge 99.6 3.8E-15 8.3E-20 148.4 15.6 235 110-417 3-261 (275)
76 TIGR01963 PHB_DH 3-hydroxybuty 99.6 6.9E-15 1.5E-19 144.6 16.6 227 110-400 1-251 (255)
77 PRK12825 fabG 3-ketoacyl-(acyl 99.6 1.1E-14 2.4E-19 142.2 16.8 218 109-400 5-245 (249)
78 PRK12429 3-hydroxybutyrate deh 99.6 2.1E-14 4.6E-19 141.3 17.1 232 109-400 3-254 (258)
79 PRK12826 3-ketoacyl-(acyl-carr 99.6 4.4E-14 9.5E-19 138.4 17.7 221 108-400 4-246 (251)
80 PRK09135 pteridine reductase; 99.6 2.7E-14 5.8E-19 139.8 15.8 219 109-400 5-244 (249)
81 PRK12746 short chain dehydroge 99.6 4.1E-14 9E-19 139.1 17.0 223 109-400 5-251 (254)
82 PRK05876 short chain dehydroge 99.6 2E-13 4.4E-18 135.9 21.5 235 108-418 4-262 (275)
83 PRK07067 sorbitol dehydrogenas 99.6 6.3E-14 1.4E-18 138.1 16.9 227 108-400 4-253 (257)
84 PRK06914 short chain dehydroge 99.6 4.8E-14 1.1E-18 140.8 14.8 231 109-400 2-254 (280)
85 PRK07774 short chain dehydroge 99.5 1.7E-13 3.6E-18 134.4 17.3 217 108-400 4-245 (250)
86 COG1089 Gmd GDP-D-mannose dehy 99.5 2.9E-14 6.2E-19 134.6 11.1 258 110-420 2-270 (345)
87 PRK05875 short chain dehydroge 99.5 3.8E-13 8.2E-18 134.0 19.5 240 108-419 5-271 (276)
88 PF05368 NmrA: NmrA-like famil 99.5 1.5E-13 3.2E-18 133.5 16.0 227 113-421 1-228 (233)
89 PRK07775 short chain dehydroge 99.5 1.9E-13 4.2E-18 136.1 16.6 223 108-399 8-250 (274)
90 PRK12829 short chain dehydroge 99.5 2.8E-13 6.1E-18 133.9 17.5 228 108-400 9-260 (264)
91 PRK12745 3-ketoacyl-(acyl-carr 99.5 3.1E-13 6.6E-18 133.0 17.5 221 110-400 2-250 (256)
92 PRK12935 acetoacetyl-CoA reduc 99.5 1.4E-13 3.1E-18 134.7 14.9 220 108-400 4-244 (247)
93 PRK08063 enoyl-(acyl carrier p 99.5 1.9E-13 4.2E-18 133.9 15.8 222 109-400 3-245 (250)
94 PRK07806 short chain dehydroge 99.5 6.2E-14 1.3E-18 137.3 12.2 223 109-400 5-242 (248)
95 PRK06077 fabG 3-ketoacyl-(acyl 99.5 4.4E-13 9.4E-18 131.5 18.0 223 109-400 5-244 (252)
96 TIGR03206 benzo_BadH 2-hydroxy 99.5 4.4E-13 9.5E-18 131.4 17.9 227 109-400 2-247 (250)
97 PRK06180 short chain dehydroge 99.5 2.6E-13 5.5E-18 135.4 16.3 122 109-245 3-141 (277)
98 PRK07074 short chain dehydroge 99.5 4.6E-13 1E-17 131.9 16.9 231 110-416 2-254 (257)
99 PRK06138 short chain dehydroge 99.5 1.1E-12 2.4E-17 128.7 19.4 224 108-400 3-248 (252)
100 KOG1431 GDP-L-fucose synthetas 99.5 2.4E-13 5.1E-18 124.0 13.2 244 110-421 1-260 (315)
101 PRK05653 fabG 3-ketoacyl-(acyl 99.5 5.9E-13 1.3E-17 129.8 16.9 217 109-400 4-243 (246)
102 PRK12823 benD 1,6-dihydroxycyc 99.5 7.7E-13 1.7E-17 130.6 17.5 124 108-245 6-148 (260)
103 PRK07523 gluconate 5-dehydroge 99.5 1.1E-12 2.4E-17 129.1 18.3 220 108-400 8-250 (255)
104 PRK12827 short chain dehydroge 99.5 2.6E-12 5.6E-17 125.7 20.2 125 108-246 4-152 (249)
105 PRK06128 oxidoreductase; Provi 99.5 2.1E-12 4.5E-17 130.4 19.5 222 108-400 53-296 (300)
106 PRK12828 short chain dehydroge 99.5 3E-12 6.4E-17 124.4 19.9 210 108-400 5-235 (239)
107 PRK09186 flagellin modificatio 99.5 8.9E-13 1.9E-17 129.7 16.1 126 108-245 2-149 (256)
108 PRK07890 short chain dehydroge 99.5 7.2E-13 1.6E-17 130.5 15.1 123 108-244 3-144 (258)
109 PRK06194 hypothetical protein; 99.5 8.6E-13 1.9E-17 132.2 15.6 125 108-246 4-153 (287)
110 PRK07231 fabG 3-ketoacyl-(acyl 99.5 2.3E-12 5E-17 126.3 18.2 125 108-247 3-147 (251)
111 PRK05557 fabG 3-ketoacyl-(acyl 99.5 3.2E-12 6.9E-17 124.8 18.8 122 109-244 4-145 (248)
112 PRK06181 short chain dehydroge 99.5 5E-12 1.1E-16 125.0 20.3 123 110-246 1-142 (263)
113 PRK06123 short chain dehydroge 99.5 1.4E-12 2.9E-17 127.8 15.4 218 110-400 2-247 (248)
114 PRK07666 fabG 3-ketoacyl-(acyl 99.5 5.4E-12 1.2E-16 122.8 19.5 123 109-245 6-147 (239)
115 PRK07453 protochlorophyllide o 99.4 2E-12 4.4E-17 131.8 16.1 124 109-246 5-150 (322)
116 PRK09134 short chain dehydroge 99.4 5.3E-12 1.2E-16 124.5 17.7 120 109-242 8-147 (258)
117 PRK08219 short chain dehydroge 99.4 5.1E-12 1.1E-16 121.8 16.6 116 110-246 3-134 (227)
118 PRK07326 short chain dehydroge 99.4 1.4E-11 3E-16 119.7 19.8 121 109-244 5-143 (237)
119 PRK12936 3-ketoacyl-(acyl-carr 99.4 5.3E-12 1.1E-16 123.2 16.7 121 109-244 5-142 (245)
120 PRK07060 short chain dehydroge 99.4 3.3E-12 7.1E-17 124.7 15.1 218 108-400 7-241 (245)
121 PRK07454 short chain dehydroge 99.4 1.1E-11 2.5E-16 120.7 18.8 124 109-246 5-147 (241)
122 PRK08628 short chain dehydroge 99.4 4.3E-12 9.4E-17 125.0 15.5 226 108-400 5-249 (258)
123 PRK05650 short chain dehydroge 99.4 1.6E-11 3.5E-16 122.0 19.7 121 111-246 1-141 (270)
124 PRK05866 short chain dehydroge 99.4 2E-11 4.3E-16 122.8 20.5 124 108-245 38-182 (293)
125 PRK12384 sorbitol-6-phosphate 99.4 5.3E-12 1.2E-16 124.5 15.9 229 110-400 2-255 (259)
126 PRK12937 short chain dehydroge 99.4 1.1E-11 2.3E-16 121.2 17.9 124 108-244 3-143 (245)
127 PRK12939 short chain dehydroge 99.4 1.9E-11 4.1E-16 119.7 19.5 123 108-244 5-146 (250)
128 PRK06179 short chain dehydroge 99.4 6.4E-12 1.4E-16 124.7 15.4 117 109-245 3-136 (270)
129 PRK05565 fabG 3-ketoacyl-(acyl 99.4 2E-11 4.3E-16 119.3 18.5 222 108-400 3-244 (247)
130 PRK07024 short chain dehydroge 99.4 7E-12 1.5E-16 123.6 15.4 162 110-327 2-187 (257)
131 PRK08213 gluconate 5-dehydroge 99.4 6E-12 1.3E-16 124.2 14.9 125 108-246 10-154 (259)
132 PRK06182 short chain dehydroge 99.4 1.3E-11 2.8E-16 122.8 17.4 117 109-244 2-136 (273)
133 PRK07825 short chain dehydroge 99.4 3.1E-11 6.6E-16 120.1 19.7 121 109-245 4-141 (273)
134 PRK09291 short chain dehydroge 99.4 8.1E-12 1.8E-16 122.9 15.1 120 110-244 2-135 (257)
135 PRK08220 2,3-dihydroxybenzoate 99.4 1.6E-11 3.4E-16 120.5 16.6 116 108-244 6-138 (252)
136 PRK10538 malonic semialdehyde 99.4 2.4E-11 5.2E-16 119.1 17.7 117 111-244 1-137 (248)
137 PRK05717 oxidoreductase; Valid 99.4 1.1E-11 2.3E-16 122.1 15.0 123 108-245 8-148 (255)
138 PRK07102 short chain dehydroge 99.4 2.6E-11 5.5E-16 118.4 17.3 122 110-244 1-138 (243)
139 PRK06500 short chain dehydroge 99.4 2.6E-11 5.5E-16 118.7 17.0 117 109-242 5-138 (249)
140 TIGR01832 kduD 2-deoxy-D-gluco 99.4 2.7E-11 5.8E-16 118.6 17.1 125 108-246 3-145 (248)
141 PRK06101 short chain dehydroge 99.4 3.1E-11 6.7E-16 117.7 17.4 118 110-243 1-130 (240)
142 PRK07109 short chain dehydroge 99.3 4.4E-11 9.6E-16 122.4 18.8 125 108-246 6-149 (334)
143 PRK05993 short chain dehydroge 99.3 2.4E-11 5.2E-16 121.2 16.4 116 110-244 4-138 (277)
144 TIGR01830 3oxo_ACP_reduc 3-oxo 99.3 3.7E-11 7.9E-16 116.7 17.2 121 113-244 1-138 (239)
145 PRK08324 short chain dehydroge 99.3 1.4E-11 3E-16 137.9 15.8 231 108-400 420-674 (681)
146 PRK08267 short chain dehydroge 99.3 3.3E-11 7.1E-16 119.0 16.6 119 110-244 1-139 (260)
147 PRK06196 oxidoreductase; Provi 99.3 1.4E-11 3E-16 125.2 14.4 120 108-244 24-159 (315)
148 PRK08251 short chain dehydroge 99.3 5.2E-11 1.1E-15 116.6 17.7 123 110-244 2-143 (248)
149 PRK06935 2-deoxy-D-gluconate 3 99.3 3.6E-11 7.7E-16 118.6 16.6 124 108-245 13-154 (258)
150 PRK06139 short chain dehydroge 99.3 8.3E-11 1.8E-15 120.0 19.7 201 108-383 5-228 (330)
151 PRK08643 acetoin reductase; Va 99.3 6.1E-11 1.3E-15 116.7 17.6 121 110-244 2-142 (256)
152 PLN02253 xanthoxin dehydrogena 99.3 3.4E-11 7.4E-16 120.2 16.0 122 108-244 16-158 (280)
153 PRK05867 short chain dehydroge 99.3 5.9E-11 1.3E-15 116.6 17.0 122 108-243 7-148 (253)
154 PRK09072 short chain dehydroge 99.3 1.7E-10 3.7E-15 114.1 19.9 121 109-244 4-142 (263)
155 PRK06949 short chain dehydroge 99.3 4.9E-11 1.1E-15 117.5 15.9 124 108-245 7-157 (258)
156 PRK06701 short chain dehydroge 99.3 5.7E-11 1.2E-15 119.3 16.5 220 107-400 43-285 (290)
157 PRK08264 short chain dehydroge 99.3 9.6E-11 2.1E-15 113.9 17.4 120 109-246 5-138 (238)
158 PRK09730 putative NAD(P)-bindi 99.3 2E-11 4.3E-16 119.3 12.6 123 110-244 1-145 (247)
159 PRK12824 acetoacetyl-CoA reduc 99.3 1.6E-10 3.6E-15 112.6 18.8 216 111-400 3-241 (245)
160 PRK06198 short chain dehydroge 99.3 1.2E-10 2.6E-15 114.8 18.0 227 108-400 4-253 (260)
161 PRK07985 oxidoreductase; Provi 99.3 8E-11 1.7E-15 118.4 16.9 125 108-246 47-191 (294)
162 PRK12744 short chain dehydroge 99.3 1.6E-10 3.5E-15 113.8 18.7 229 108-400 6-253 (257)
163 PRK07904 short chain dehydroge 99.3 2.5E-10 5.4E-15 112.3 19.9 122 109-244 7-149 (253)
164 PRK12938 acetyacetyl-CoA reduc 99.3 1E-10 2.2E-15 114.4 16.8 125 109-244 2-143 (246)
165 PRK08085 gluconate 5-dehydroge 99.3 9.2E-11 2E-15 115.3 16.6 125 108-244 7-148 (254)
166 PRK08217 fabG 3-ketoacyl-(acyl 99.3 1.6E-10 3.4E-15 113.3 18.0 216 108-400 3-250 (253)
167 PRK07814 short chain dehydroge 99.3 8.1E-11 1.7E-15 116.4 15.7 123 108-244 8-150 (263)
168 PRK07063 short chain dehydroge 99.3 1.2E-10 2.6E-15 114.9 16.9 125 108-244 5-148 (260)
169 PRK12747 short chain dehydroge 99.3 1.3E-10 2.7E-15 114.2 16.6 124 108-245 2-149 (252)
170 PRK06841 short chain dehydroge 99.3 1.8E-10 3.8E-15 113.3 17.6 121 108-244 13-151 (255)
171 PRK08017 oxidoreductase; Provi 99.3 1.8E-10 3.8E-15 113.3 17.5 115 111-244 3-136 (256)
172 PRK12481 2-deoxy-D-gluconate 3 99.3 1.3E-10 2.9E-15 114.1 16.4 125 108-246 6-148 (251)
173 PRK06197 short chain dehydroge 99.3 1E-10 2.2E-15 118.4 15.8 125 108-245 14-156 (306)
174 PRK06947 glucose-1-dehydrogena 99.3 6.6E-11 1.4E-15 115.8 14.0 122 110-244 2-146 (248)
175 PRK06463 fabG 3-ketoacyl-(acyl 99.3 1.9E-10 4E-15 113.2 17.1 122 108-246 5-143 (255)
176 PRK08277 D-mannonate oxidoredu 99.3 1.8E-10 3.8E-15 114.9 17.1 125 108-246 8-166 (278)
177 PRK07478 short chain dehydroge 99.3 1.9E-10 4E-15 113.1 16.9 124 108-245 4-147 (254)
178 PRK05693 short chain dehydroge 99.3 1.8E-10 3.9E-15 114.7 16.9 117 110-244 1-133 (274)
179 PRK08226 short chain dehydroge 99.3 1.9E-10 4.1E-15 113.7 16.9 123 108-244 4-144 (263)
180 PRK07792 fabG 3-ketoacyl-(acyl 99.3 2.2E-10 4.7E-15 116.0 17.6 123 108-244 10-158 (306)
181 PRK08993 2-deoxy-D-gluconate 3 99.3 2.1E-10 4.7E-15 112.7 17.1 125 108-246 8-150 (253)
182 COG0702 Predicted nucleoside-d 99.3 2.5E-10 5.3E-15 113.4 17.7 221 111-421 1-221 (275)
183 PRK08265 short chain dehydroge 99.3 2.2E-10 4.8E-15 113.2 17.2 120 108-244 4-140 (261)
184 PRK07069 short chain dehydroge 99.3 1.3E-10 2.8E-15 113.9 15.4 122 112-246 1-143 (251)
185 PRK12743 oxidoreductase; Provi 99.3 1.7E-10 3.6E-15 113.7 16.2 120 110-243 2-142 (256)
186 PRK08945 putative oxoacyl-(acy 99.2 1.4E-10 3.1E-15 113.5 15.3 127 107-244 9-155 (247)
187 PRK12742 oxidoreductase; Provi 99.2 1.8E-10 3.9E-15 111.8 15.9 121 108-244 4-135 (237)
188 PRK07677 short chain dehydroge 99.2 1.8E-10 3.9E-15 113.1 15.8 121 110-244 1-141 (252)
189 PRK06113 7-alpha-hydroxysteroi 99.2 2.1E-10 4.6E-15 112.8 16.4 123 108-244 9-149 (255)
190 PRK06523 short chain dehydroge 99.2 2.7E-10 5.9E-15 112.4 17.0 117 108-245 7-142 (260)
191 PRK08642 fabG 3-ketoacyl-(acyl 99.2 2.7E-10 5.8E-15 111.8 16.6 120 109-243 4-148 (253)
192 PRK07023 short chain dehydroge 99.2 1.7E-10 3.7E-15 112.6 14.8 119 110-245 1-141 (243)
193 PRK06124 gluconate 5-dehydroge 99.2 3E-10 6.6E-15 111.7 16.6 123 108-244 9-150 (256)
194 PRK06057 short chain dehydroge 99.2 3.5E-10 7.7E-15 111.2 16.9 117 108-243 5-142 (255)
195 PRK06114 short chain dehydroge 99.2 2.6E-10 5.6E-15 112.2 15.9 123 108-244 6-148 (254)
196 PRK06398 aldose dehydrogenase; 99.2 2.4E-10 5.3E-15 112.7 15.7 115 108-245 4-135 (258)
197 PRK07035 short chain dehydroge 99.2 2.1E-10 4.6E-15 112.6 15.2 123 108-244 6-148 (252)
198 PRK07201 short chain dehydroge 99.2 4.7E-10 1E-14 125.8 19.9 125 108-246 369-514 (657)
199 PRK07576 short chain dehydroge 99.2 2.7E-10 5.9E-15 112.7 16.0 123 108-244 7-147 (264)
200 PRK06172 short chain dehydroge 99.2 2.7E-10 5.8E-15 111.9 15.6 125 108-246 5-149 (253)
201 TIGR01829 AcAcCoA_reduct aceto 99.2 2.2E-10 4.7E-15 111.6 14.8 122 111-244 1-140 (242)
202 PRK07577 short chain dehydroge 99.2 3.7E-10 8.1E-15 109.4 16.1 115 109-246 2-132 (234)
203 PRK12748 3-ketoacyl-(acyl-carr 99.2 4.8E-10 1E-14 110.4 17.1 124 109-246 4-159 (256)
204 KOG2774 NAD dependent epimeras 99.2 1.9E-11 4E-16 112.3 6.4 253 109-418 43-299 (366)
205 PRK09242 tropinone reductase; 99.2 3.9E-10 8.4E-15 111.1 16.4 127 108-246 7-152 (257)
206 PRK07856 short chain dehydroge 99.2 4.7E-10 1E-14 110.2 16.5 118 108-245 4-139 (252)
207 PRK08339 short chain dehydroge 99.2 5.7E-10 1.2E-14 110.4 17.2 125 108-245 6-148 (263)
208 PRK08589 short chain dehydroge 99.2 5.3E-10 1.1E-14 111.2 16.8 124 108-245 4-145 (272)
209 PRK07097 gluconate 5-dehydroge 99.2 6.1E-10 1.3E-14 110.2 16.4 125 108-244 8-149 (265)
210 PRK05786 fabG 3-ketoacyl-(acyl 99.2 2.9E-10 6.3E-15 110.5 13.6 120 109-243 4-138 (238)
211 PRK07041 short chain dehydroge 99.2 5.8E-10 1.3E-14 107.8 15.6 119 114-246 1-129 (230)
212 PRK08703 short chain dehydroge 99.2 1E-09 2.2E-14 106.9 17.1 125 108-243 4-149 (239)
213 TIGR02415 23BDH acetoin reduct 99.2 4.2E-10 9.2E-15 110.5 14.2 122 111-244 1-140 (254)
214 TIGR03325 BphB_TodD cis-2,3-di 99.2 7.3E-10 1.6E-14 109.5 15.9 121 109-244 4-145 (262)
215 PRK08278 short chain dehydroge 99.2 6.3E-10 1.4E-14 110.7 15.4 124 108-242 4-150 (273)
216 PRK08936 glucose-1-dehydrogena 99.2 9.8E-10 2.1E-14 108.5 16.5 122 108-243 5-147 (261)
217 PRK05872 short chain dehydroge 99.2 1.1E-09 2.5E-14 110.2 17.2 124 108-246 7-148 (296)
218 PRK06171 sorbitol-6-phosphate 99.2 1.1E-09 2.3E-14 108.5 16.4 117 108-245 7-149 (266)
219 COG4221 Short-chain alcohol de 99.1 4.4E-09 9.5E-14 99.0 19.0 207 108-386 4-231 (246)
220 COG0300 DltE Short-chain dehyd 99.1 1.9E-09 4.1E-14 104.3 16.8 169 108-326 4-191 (265)
221 TIGR02632 RhaD_aldol-ADH rhamn 99.1 8.1E-10 1.7E-14 123.1 16.4 125 108-244 412-556 (676)
222 PRK06200 2,3-dihydroxy-2,3-dih 99.1 9.1E-10 2E-14 108.8 15.2 121 108-245 4-147 (263)
223 PRK06550 fabG 3-ketoacyl-(acyl 99.1 1.1E-09 2.4E-14 106.2 15.5 118 108-245 3-131 (235)
224 PRK06924 short chain dehydroge 99.1 8.7E-10 1.9E-14 108.1 14.8 121 110-244 1-144 (251)
225 PRK07062 short chain dehydroge 99.1 1.5E-09 3.3E-14 107.4 16.5 126 108-245 6-150 (265)
226 PRK07832 short chain dehydroge 99.1 1.6E-09 3.5E-14 107.7 16.6 121 111-244 1-141 (272)
227 PRK05855 short chain dehydroge 99.1 9.6E-10 2.1E-14 121.3 16.5 126 108-247 313-458 (582)
228 PRK07578 short chain dehydroge 99.1 2.7E-09 5.9E-14 100.8 17.2 104 111-244 1-115 (199)
229 PRK07791 short chain dehydroge 99.1 3.6E-09 7.8E-14 106.0 18.8 123 108-244 4-160 (286)
230 TIGR01831 fabG_rel 3-oxoacyl-( 99.1 9.9E-10 2.1E-14 106.9 14.3 118 113-244 1-139 (239)
231 PRK05854 short chain dehydroge 99.1 7.6E-10 1.6E-14 112.4 13.8 126 108-245 12-154 (313)
232 PRK08416 7-alpha-hydroxysteroi 99.1 1.2E-09 2.6E-14 107.8 14.8 123 108-243 6-154 (260)
233 PRK06953 short chain dehydroge 99.1 2.2E-09 4.8E-14 103.3 15.8 116 110-243 1-132 (222)
234 smart00822 PKS_KR This enzymat 99.1 1.1E-09 2.4E-14 100.6 12.8 119 111-244 1-139 (180)
235 PRK08177 short chain dehydroge 99.1 1.4E-09 3E-14 104.9 13.5 114 110-242 1-132 (225)
236 PRK06484 short chain dehydroge 99.1 3E-09 6.5E-14 115.9 16.7 121 108-245 267-405 (520)
237 PRK07424 bifunctional sterol d 99.1 3.7E-09 8E-14 109.8 16.3 107 108-229 176-286 (406)
238 PRK09009 C factor cell-cell si 99.1 1.8E-08 4E-13 97.7 20.3 114 111-242 1-133 (235)
239 PRK07831 short chain dehydroge 99.1 6.6E-09 1.4E-13 102.6 17.0 125 107-243 14-159 (262)
240 PRK12859 3-ketoacyl-(acyl-carr 99.0 1.2E-08 2.6E-13 100.5 18.0 123 108-244 4-158 (256)
241 PLN02780 ketoreductase/ oxidor 99.0 6.7E-09 1.5E-13 105.6 16.6 126 109-244 52-196 (320)
242 PRK05884 short chain dehydroge 99.0 4.2E-09 9.1E-14 101.5 14.3 116 111-243 1-133 (223)
243 TIGR01289 LPOR light-dependent 99.0 5.4E-09 1.2E-13 106.2 15.2 123 110-246 3-148 (314)
244 PRK06940 short chain dehydroge 99.0 6.6E-09 1.4E-13 103.5 14.4 119 110-244 2-129 (275)
245 PRK12367 short chain dehydroge 99.0 9.7E-09 2.1E-13 100.4 15.1 105 108-229 12-120 (245)
246 PRK06125 short chain dehydroge 99.0 1.9E-08 4.2E-13 99.1 17.5 122 108-242 5-141 (259)
247 KOG4039 Serine/threonine kinas 99.0 3.3E-09 7E-14 93.6 10.2 121 109-247 17-137 (238)
248 PRK06483 dihydromonapterin red 99.0 1.7E-08 3.6E-13 98.1 16.5 117 110-243 2-137 (236)
249 PRK08340 glucose-1-dehydrogena 99.0 1.7E-08 3.7E-13 99.6 16.6 119 111-244 1-141 (259)
250 KOG1372 GDP-mannose 4,6 dehydr 99.0 3.9E-09 8.4E-14 97.9 10.7 262 110-421 28-300 (376)
251 PRK06079 enoyl-(acyl carrier p 98.9 2.9E-08 6.3E-13 97.5 16.9 121 108-243 5-146 (252)
252 PRK08261 fabG 3-ketoacyl-(acyl 98.9 1.5E-08 3.3E-13 108.2 15.9 122 108-245 208-347 (450)
253 PRK06484 short chain dehydroge 98.9 2.2E-08 4.8E-13 109.1 17.2 122 109-245 4-145 (520)
254 TIGR02685 pter_reduc_Leis pter 98.9 1.2E-08 2.7E-13 101.0 13.9 110 111-229 2-139 (267)
255 KOG1201 Hydroxysteroid 17-beta 98.9 6.3E-08 1.4E-12 93.7 17.8 121 108-244 36-176 (300)
256 PRK08415 enoyl-(acyl carrier p 98.9 4E-08 8.6E-13 97.8 16.9 120 109-243 4-146 (274)
257 KOG1205 Predicted dehydrogenas 98.9 3.2E-08 7E-13 96.5 15.3 126 107-243 9-152 (282)
258 PRK06505 enoyl-(acyl carrier p 98.9 4.1E-08 9E-13 97.5 16.3 122 108-244 5-149 (271)
259 PRK08159 enoyl-(acyl carrier p 98.9 6.6E-08 1.4E-12 96.1 16.5 121 107-242 7-150 (272)
260 TIGR01500 sepiapter_red sepiap 98.9 5.4E-08 1.2E-12 95.8 15.7 121 112-244 2-154 (256)
261 PRK08690 enoyl-(acyl carrier p 98.9 7.1E-08 1.5E-12 95.3 16.6 122 108-244 4-150 (261)
262 PRK07533 enoyl-(acyl carrier p 98.9 8.4E-08 1.8E-12 94.6 17.1 121 108-243 8-151 (258)
263 PF00106 adh_short: short chai 98.9 3.3E-08 7.1E-13 90.4 12.7 121 111-245 1-139 (167)
264 PRK07370 enoyl-(acyl carrier p 98.9 9.3E-08 2E-12 94.3 16.7 121 108-243 4-150 (258)
265 PRK08594 enoyl-(acyl carrier p 98.8 1.3E-07 2.7E-12 93.3 16.7 124 108-244 5-151 (257)
266 PRK07984 enoyl-(acyl carrier p 98.8 2.1E-07 4.5E-12 92.0 17.4 121 108-243 4-148 (262)
267 PRK06997 enoyl-(acyl carrier p 98.8 1.8E-07 4E-12 92.3 16.7 122 108-244 4-149 (260)
268 PLN00015 protochlorophyllide r 98.8 1.2E-07 2.6E-12 96.0 15.1 118 114-245 1-141 (308)
269 PRK08862 short chain dehydroge 98.8 1.9E-07 4.2E-12 90.1 15.6 121 108-242 3-145 (227)
270 PRK07889 enoyl-(acyl carrier p 98.8 2.7E-07 5.9E-12 90.9 16.8 117 108-241 5-146 (256)
271 PRK06603 enoyl-(acyl carrier p 98.8 3E-07 6.4E-12 90.8 16.9 122 108-244 6-150 (260)
272 PRK08303 short chain dehydroge 98.8 2.8E-07 6.1E-12 93.1 17.0 122 108-243 6-161 (305)
273 KOG1203 Predicted dehydrogenas 98.7 3.6E-07 7.9E-12 93.3 15.6 167 108-325 77-247 (411)
274 PF08659 KR: KR domain; Inter 98.6 2.5E-07 5.4E-12 86.0 10.9 119 112-245 2-140 (181)
275 KOG4288 Predicted oxidoreducta 98.6 9E-08 1.9E-12 88.3 7.5 208 112-385 54-264 (283)
276 PRK05599 hypothetical protein; 98.6 1.9E-06 4.2E-11 84.2 16.7 120 111-244 1-140 (246)
277 KOG1208 Dehydrogenases with di 98.5 9.4E-07 2E-11 88.7 12.8 124 108-244 33-174 (314)
278 PLN02730 enoyl-[acyl-carrier-p 98.4 6.4E-06 1.4E-10 82.8 16.2 134 108-244 7-182 (303)
279 KOG0725 Reductases with broad 98.4 1.3E-05 2.9E-10 79.1 17.6 127 108-245 6-154 (270)
280 KOG1610 Corticosteroid 11-beta 98.4 9.6E-06 2.1E-10 79.2 15.5 121 108-242 27-166 (322)
281 KOG4169 15-hydroxyprostaglandi 98.4 2.1E-06 4.5E-11 79.6 10.1 225 108-405 3-248 (261)
282 KOG1200 Mitochondrial/plastidi 98.4 1.6E-05 3.5E-10 71.8 15.2 178 104-333 8-206 (256)
283 COG1028 FabG Dehydrogenases wi 98.4 1.5E-05 3.4E-10 77.9 16.4 123 108-245 3-147 (251)
284 KOG1178 Non-ribosomal peptide 98.3 2.7E-07 5.8E-12 104.1 2.6 208 32-241 617-856 (1032)
285 COG3967 DltE Short-chain dehyd 98.3 2.9E-05 6.3E-10 70.9 14.7 123 109-247 4-145 (245)
286 PRK06720 hypothetical protein; 98.3 1E-05 2.2E-10 74.1 11.5 124 108-245 14-161 (169)
287 PRK08309 short chain dehydroge 98.2 6.9E-06 1.5E-10 75.8 10.0 102 111-242 1-113 (177)
288 PLN00106 malate dehydrogenase 98.2 1.1E-05 2.3E-10 81.5 11.2 121 110-245 18-139 (323)
289 TIGR02813 omega_3_PfaA polyket 98.2 2.2E-05 4.9E-10 97.8 15.8 129 107-244 1994-2179(2582)
290 PTZ00325 malate dehydrogenase; 98.1 1E-05 2.2E-10 81.6 9.5 125 108-247 6-131 (321)
291 PRK06300 enoyl-(acyl carrier p 98.1 5.8E-05 1.3E-09 75.9 14.8 134 108-244 6-181 (299)
292 COG2910 Putative NADH-flavin r 98.1 0.00019 4.2E-09 64.6 15.8 108 111-244 1-108 (211)
293 KOG1207 Diacetyl reductase/L-x 98.1 3E-05 6.5E-10 68.8 9.7 203 107-383 4-226 (245)
294 PF13561 adh_short_C2: Enoyl-( 98.0 9.4E-05 2E-09 72.0 13.0 211 117-400 1-239 (241)
295 KOG1210 Predicted 3-ketosphing 98.0 0.00051 1.1E-08 67.2 17.2 124 111-244 34-175 (331)
296 PRK12428 3-alpha-hydroxysteroi 98.0 1.6E-05 3.4E-10 77.5 7.0 72 168-246 26-102 (241)
297 KOG1611 Predicted short chain- 98.0 0.00019 4.1E-09 66.8 13.4 124 110-244 3-158 (249)
298 cd01336 MDH_cytoplasmic_cytoso 97.9 3.3E-05 7.3E-10 78.4 9.3 121 110-241 2-128 (325)
299 KOG3019 Predicted nucleoside-d 97.9 0.00011 2.5E-09 67.9 11.6 162 211-421 99-261 (315)
300 PRK09620 hypothetical protein; 97.9 9.7E-06 2.1E-10 77.8 4.8 82 109-206 2-101 (229)
301 PRK14982 acyl-ACP reductase; P 97.5 0.00031 6.6E-09 71.1 8.0 77 107-205 152-228 (340)
302 KOG1014 17 beta-hydroxysteroid 97.4 0.0023 5.1E-08 62.7 13.0 168 111-327 50-236 (312)
303 COG1748 LYS9 Saccharopine dehy 97.4 0.00085 1.8E-08 68.8 9.7 98 110-243 1-100 (389)
304 KOG1199 Short-chain alcohol de 97.4 0.00054 1.2E-08 60.7 7.0 123 108-247 7-158 (260)
305 KOG1204 Predicted dehydrogenas 97.3 0.0057 1.2E-07 57.2 13.2 121 110-245 6-149 (253)
306 PRK06732 phosphopantothenate-- 97.3 0.0006 1.3E-08 65.7 7.0 98 114-229 19-117 (229)
307 KOG1209 1-Acyl dihydroxyaceton 97.2 0.0025 5.3E-08 58.8 9.7 119 110-247 7-145 (289)
308 PRK05086 malate dehydrogenase; 97.2 0.003 6.4E-08 63.9 10.9 120 111-244 1-121 (312)
309 PF03435 Saccharop_dh: Sacchar 97.2 0.0029 6.3E-08 66.2 11.2 99 113-243 1-99 (386)
310 KOG2733 Uncharacterized membra 97.2 0.0013 2.8E-08 65.2 7.7 87 112-207 7-98 (423)
311 PF00550 PP-binding: Phosphopa 97.1 0.0004 8.6E-09 52.8 2.9 29 34-62 21-49 (67)
312 cd00704 MDH Malate dehydrogena 97.1 0.0052 1.1E-07 62.3 11.4 113 112-241 2-126 (323)
313 cd01078 NAD_bind_H4MPT_DH NADP 97.0 0.0019 4E-08 60.7 7.3 82 108-202 26-107 (194)
314 cd01338 MDH_choloroplast_like 97.0 0.0067 1.4E-07 61.5 11.6 178 110-336 2-194 (322)
315 TIGR01758 MDH_euk_cyt malate d 96.8 0.01 2.2E-07 60.3 10.7 113 112-241 1-125 (324)
316 PF00056 Ldh_1_N: lactate/mala 96.7 0.025 5.4E-07 50.1 11.3 115 111-241 1-118 (141)
317 PRK13656 trans-2-enoyl-CoA red 96.6 0.0076 1.7E-07 61.7 8.1 82 109-205 40-144 (398)
318 PRK05579 bifunctional phosphop 96.5 0.0039 8.4E-08 65.0 5.8 75 108-205 186-280 (399)
319 TIGR00715 precor6x_red precorr 96.4 0.014 3E-07 57.0 8.7 93 111-235 1-95 (256)
320 PRK05691 peptide synthase; Val 96.2 0.0018 4E-08 87.0 1.6 54 10-69 4240-4302(4334)
321 COG3268 Uncharacterized conser 95.9 0.023 4.9E-07 56.2 7.3 75 112-203 8-82 (382)
322 PRK12475 thiamine/molybdopteri 95.9 0.099 2.1E-06 53.5 12.4 112 103-247 17-155 (338)
323 KOG1478 3-keto sterol reductas 95.9 0.12 2.6E-06 49.3 11.5 129 111-244 4-178 (341)
324 PF04127 DFP: DNA / pantothena 95.9 0.012 2.5E-07 54.6 4.8 79 109-206 2-96 (185)
325 PRK12467 peptide synthase; Pro 95.8 0.0035 7.7E-08 83.6 1.5 53 11-69 3605-3666(3956)
326 PRK10252 entF enterobactin syn 95.8 0.0038 8.1E-08 75.9 1.5 45 25-69 986-1039(1296)
327 cd01485 E1-1_like Ubiquitin ac 95.7 0.14 3E-06 48.2 11.6 113 104-247 13-152 (198)
328 PRK05691 peptide synthase; Val 95.7 0.004 8.7E-08 83.9 1.3 45 25-69 1646-1699(4334)
329 PRK07688 thiamine/molybdopteri 95.6 0.15 3.3E-06 52.1 12.4 118 104-247 18-155 (339)
330 PF00899 ThiF: ThiF family; I 95.6 0.27 5.9E-06 43.0 12.4 104 110-246 2-130 (135)
331 PRK12467 peptide synthase; Pro 95.5 0.0053 1.1E-07 82.1 1.4 45 25-69 1038-1091(3956)
332 cd01337 MDH_glyoxysomal_mitoch 95.5 0.1 2.2E-06 52.6 10.1 115 111-241 1-117 (310)
333 PRK12316 peptide synthase; Pro 95.4 0.006 1.3E-07 83.2 1.4 44 25-69 3564-3616(5163)
334 PRK12548 shikimate 5-dehydroge 95.3 0.055 1.2E-06 54.1 7.8 84 108-202 124-209 (289)
335 TIGR01759 MalateDH-SF1 malate 95.3 0.11 2.4E-06 52.7 9.9 118 110-241 3-129 (323)
336 cd05294 LDH-like_MDH_nadp A la 95.2 0.07 1.5E-06 53.9 8.3 109 111-230 1-111 (309)
337 PF01118 Semialdhyde_dh: Semia 95.1 0.026 5.6E-07 48.5 4.2 33 112-145 1-33 (121)
338 PRK12316 peptide synthase; Pro 95.1 0.0082 1.8E-07 81.9 1.3 45 25-69 5080-5133(5163)
339 PRK14106 murD UDP-N-acetylmura 95.0 0.12 2.6E-06 55.2 9.9 78 108-204 3-80 (450)
340 PRK08223 hypothetical protein; 95.0 0.3 6.5E-06 48.4 11.6 112 104-246 21-157 (287)
341 TIGR02356 adenyl_thiF thiazole 95.0 0.37 7.9E-06 45.5 11.8 111 104-247 15-150 (202)
342 cd00757 ThiF_MoeB_HesA_family 94.9 0.3 6.5E-06 47.0 11.4 110 105-247 16-150 (228)
343 PRK14874 aspartate-semialdehyd 94.9 0.12 2.6E-06 52.9 9.1 35 110-144 1-35 (334)
344 PRK05597 molybdopterin biosynt 94.9 0.32 7E-06 50.1 12.3 109 105-247 23-157 (355)
345 PRK05442 malate dehydrogenase; 94.9 0.19 4.2E-06 51.0 10.2 119 109-241 3-130 (326)
346 TIGR02114 coaB_strep phosphopa 94.8 0.052 1.1E-06 52.2 5.7 68 114-205 18-93 (227)
347 PLN02819 lysine-ketoglutarate 94.8 0.21 4.5E-06 58.1 11.2 79 109-202 568-658 (1042)
348 COG0002 ArgC Acetylglutamate s 94.8 0.19 4.1E-06 50.5 9.5 114 110-259 2-118 (349)
349 PRK05671 aspartate-semialdehyd 94.6 0.057 1.2E-06 55.0 5.8 36 110-145 4-39 (336)
350 TIGR01850 argC N-acetyl-gamma- 94.6 0.14 3E-06 52.6 8.6 103 111-246 1-105 (346)
351 PRK05690 molybdopterin biosynt 94.6 0.61 1.3E-05 45.4 12.6 109 105-246 27-160 (245)
352 PRK07411 hypothetical protein; 94.5 0.39 8.5E-06 50.2 11.9 109 105-247 33-167 (390)
353 TIGR02355 moeB molybdopterin s 94.5 0.56 1.2E-05 45.5 12.1 109 105-246 19-152 (240)
354 COG0623 FabI Enoyl-[acyl-carri 94.5 0.46 9.9E-06 44.9 10.6 110 107-229 3-132 (259)
355 PRK08328 hypothetical protein; 94.4 0.61 1.3E-05 45.0 12.0 118 104-247 21-157 (231)
356 PRK08664 aspartate-semialdehyd 94.3 0.15 3.3E-06 52.5 7.9 32 110-143 3-34 (349)
357 TIGR00521 coaBC_dfp phosphopan 94.2 0.076 1.6E-06 55.2 5.7 75 108-205 183-278 (390)
358 cd01492 Aos1_SUMO Ubiquitin ac 94.2 0.64 1.4E-05 43.6 11.4 110 104-247 15-149 (197)
359 PRK07878 molybdopterin biosynt 94.2 0.52 1.1E-05 49.4 11.8 109 105-247 37-171 (392)
360 PRK06060 acyl-CoA synthetase; 93.9 0.031 6.7E-07 63.4 2.3 27 36-62 571-597 (705)
361 PLN02968 Probable N-acetyl-gam 93.9 0.096 2.1E-06 54.4 5.7 104 108-247 36-141 (381)
362 PRK08762 molybdopterin biosynt 93.8 0.75 1.6E-05 47.9 12.3 110 105-247 130-264 (376)
363 PRK08644 thiamine biosynthesis 93.7 0.97 2.1E-05 42.9 11.8 118 104-246 22-156 (212)
364 PRK07877 hypothetical protein; 93.7 0.55 1.2E-05 52.7 11.5 112 104-242 101-230 (722)
365 PRK00066 ldh L-lactate dehydro 93.6 0.61 1.3E-05 47.3 10.7 115 109-241 5-122 (315)
366 PRK05600 thiamine biosynthesis 93.5 0.9 2E-05 47.1 11.9 110 105-247 36-170 (370)
367 cd00755 YgdL_like Family of ac 93.4 1 2.2E-05 43.4 11.4 37 106-145 7-43 (231)
368 PLN00112 malate dehydrogenase 93.3 0.62 1.3E-05 49.2 10.5 121 107-241 97-226 (444)
369 TIGR01772 MDH_euk_gproteo mala 93.1 0.59 1.3E-05 47.2 9.6 114 112-241 1-116 (312)
370 cd01489 Uba2_SUMO Ubiquitin ac 92.7 1 2.2E-05 45.4 10.6 104 112-247 1-129 (312)
371 TIGR01757 Malate-DH_plant mala 92.6 0.84 1.8E-05 47.4 10.2 119 109-241 43-170 (387)
372 PRK06129 3-hydroxyacyl-CoA deh 92.4 0.28 6.1E-06 49.6 6.3 32 111-144 3-34 (308)
373 PRK07081 acyl carrier protein; 92.2 0.12 2.5E-06 41.2 2.6 30 33-62 24-53 (83)
374 PRK09496 trkA potassium transp 92.1 0.38 8.3E-06 51.4 7.4 71 111-201 1-74 (453)
375 cd01487 E1_ThiF_like E1_ThiF_l 92.1 2.3 4.9E-05 39.0 11.4 110 112-246 1-127 (174)
376 TIGR01296 asd_B aspartate-semi 92.1 0.32 7E-06 49.8 6.3 33 112-144 1-33 (339)
377 PRK00436 argC N-acetyl-gamma-g 92.0 0.61 1.3E-05 47.9 8.3 34 110-144 2-35 (343)
378 cd05295 MDH_like Malate dehydr 91.9 0.92 2E-05 47.9 9.6 118 109-241 122-250 (452)
379 PRK14851 hypothetical protein; 91.8 1.9 4.2E-05 48.3 12.5 115 104-242 37-169 (679)
380 PF01488 Shikimate_DH: Shikima 91.8 0.39 8.5E-06 42.0 5.8 77 108-205 10-88 (135)
381 cd01484 E1-2_like Ubiquitin ac 91.7 1.5 3.3E-05 42.2 10.2 104 112-247 1-130 (234)
382 PLN02383 aspartate semialdehyd 91.7 0.27 5.8E-06 50.4 5.3 35 110-144 7-41 (344)
383 TIGR01851 argC_other N-acetyl- 91.4 0.39 8.4E-06 48.1 5.9 26 112-138 3-28 (310)
384 cd05290 LDH_3 A subgroup of L- 91.4 1.5 3.2E-05 44.3 10.1 114 112-242 1-120 (307)
385 PRK00048 dihydrodipicolinate r 91.3 0.46 1E-05 46.6 6.3 33 111-144 2-34 (257)
386 cd01491 Ube1_repeat1 Ubiquitin 91.3 2.2 4.7E-05 42.4 11.0 105 106-247 15-144 (286)
387 COG0136 Asd Aspartate-semialde 91.1 0.37 7.9E-06 48.4 5.3 36 110-145 1-36 (334)
388 PF02670 DXP_reductoisom: 1-de 90.7 0.93 2E-05 39.2 6.8 30 113-143 1-30 (129)
389 PF01113 DapB_N: Dihydrodipico 90.5 1.4 3E-05 38.0 7.8 88 111-230 1-90 (124)
390 PRK15116 sulfur acceptor prote 90.5 3.4 7.5E-05 40.6 11.5 37 105-144 25-61 (268)
391 PRK14852 hypothetical protein; 90.5 2.7 5.9E-05 48.4 12.1 111 105-246 327-462 (989)
392 cd01483 E1_enzyme_family Super 90.5 3.6 7.8E-05 36.2 10.7 105 112-246 1-127 (143)
393 cd05291 HicDH_like L-2-hydroxy 90.3 1.9 4.1E-05 43.5 9.8 114 111-241 1-117 (306)
394 smart00823 PKS_PP Phosphopante 90.2 0.19 4.1E-06 39.2 2.0 30 33-62 35-64 (86)
395 cd01493 APPBP1_RUB Ubiquitin a 90.1 2.9 6.2E-05 44.1 11.2 113 105-248 15-152 (425)
396 cd05293 LDH_1 A subgroup of L- 90.1 2.4 5.3E-05 42.8 10.4 113 111-240 4-119 (312)
397 PRK06153 hypothetical protein; 89.9 3.9 8.4E-05 42.2 11.5 110 104-241 170-299 (393)
398 KOG1202 Animal-type fatty acid 89.7 1.1 2.3E-05 51.7 7.8 162 109-324 1767-1947(2376)
399 TIGR02354 thiF_fam2 thiamine b 89.5 7.6 0.00017 36.5 12.6 87 103-199 14-117 (200)
400 COG0039 Mdh Malate/lactate deh 89.3 2.1 4.5E-05 43.0 9.0 118 111-244 1-121 (313)
401 PRK13982 bifunctional SbtC-lik 89.2 1 2.2E-05 48.0 7.1 77 108-206 254-348 (475)
402 PRK05087 D-alanine--poly(phosp 89.1 0.39 8.4E-06 37.6 3.0 30 33-62 24-54 (78)
403 TIGR01408 Ube1 ubiquitin-activ 88.7 2.7 5.9E-05 49.2 10.7 107 106-247 20-151 (1008)
404 smart00859 Semialdhyde_dh Semi 88.7 1.6 3.5E-05 37.2 6.9 25 112-137 1-25 (122)
405 cd00650 LDH_MDH_like NAD-depen 88.6 1.9 4.1E-05 42.4 8.3 115 113-241 1-119 (263)
406 PRK05828 acyl carrier protein; 88.6 0.32 6.8E-06 38.7 2.2 28 35-62 30-57 (84)
407 PRK09496 trkA potassium transp 88.4 3 6.5E-05 44.5 10.2 74 109-201 230-306 (453)
408 cd01486 Apg7 Apg7 is an E1-lik 88.2 7.6 0.00016 38.8 11.9 30 112-144 1-30 (307)
409 PRK11863 N-acetyl-gamma-glutam 88.0 1 2.2E-05 45.3 5.9 27 110-137 2-28 (313)
410 cd01488 Uba3_RUB Ubiquitin act 88.0 6.2 0.00013 39.4 11.3 105 112-248 1-136 (291)
411 TIGR01381 E1_like_apg7 E1-like 87.8 7.1 0.00015 43.0 12.3 36 106-144 334-369 (664)
412 PF12683 DUF3798: Protein of u 87.8 2.7 5.7E-05 40.8 8.1 76 133-241 59-139 (275)
413 PLN02602 lactate dehydrogenase 87.7 4.8 0.0001 41.4 10.6 112 111-239 38-152 (350)
414 COG0569 TrkA K+ transport syst 87.3 1.9 4.2E-05 41.3 7.1 74 111-201 1-75 (225)
415 PF02254 TrkA_N: TrkA-N domain 86.9 5.7 0.00012 33.2 9.2 68 113-201 1-71 (116)
416 PTZ00117 malate dehydrogenase; 86.8 3.8 8.2E-05 41.6 9.3 115 109-240 4-122 (319)
417 KOG1198 Zinc-binding oxidoredu 86.6 2.4 5.3E-05 43.5 7.8 78 107-204 155-237 (347)
418 COG1179 Dinucleotide-utilizing 86.5 6.9 0.00015 37.5 10.0 114 108-247 28-158 (263)
419 PRK06223 malate dehydrogenase; 86.5 6.1 0.00013 39.8 10.7 107 110-230 2-109 (307)
420 PRK02472 murD UDP-N-acetylmura 86.2 3.2 6.9E-05 44.2 8.9 33 108-144 3-35 (447)
421 cd05292 LDH_2 A subgroup of L- 86.1 6.7 0.00014 39.6 10.6 111 111-241 1-116 (308)
422 PRK06728 aspartate-semialdehyd 86.0 1.1 2.4E-05 45.8 4.8 36 110-145 5-41 (347)
423 cd01065 NAD_bind_Shikimate_DH 85.6 1.9 4.2E-05 38.3 5.9 35 108-145 17-51 (155)
424 PRK11199 tyrA bifunctional cho 85.5 3.1 6.8E-05 43.2 8.1 29 109-137 97-125 (374)
425 CHL00124 acpP acyl carrier pro 85.2 0.7 1.5E-05 36.5 2.5 29 34-62 28-57 (82)
426 KOG1494 NAD-dependent malate d 85.2 5 0.00011 39.2 8.5 118 109-247 27-151 (345)
427 PRK09184 acyl carrier protein; 85.2 0.78 1.7E-05 36.9 2.7 28 35-62 33-62 (89)
428 PRK08040 putative semialdehyde 84.6 1.1 2.4E-05 45.7 4.1 37 109-145 3-39 (336)
429 TIGR01688 dltC D-alanine--poly 84.4 0.69 1.5E-05 35.6 2.0 31 32-62 20-51 (73)
430 PRK06598 aspartate-semialdehyd 84.4 1.9 4.1E-05 44.4 5.7 35 111-145 2-37 (369)
431 cd01080 NAD_bind_m-THF_DH_Cycl 84.2 3 6.6E-05 38.0 6.4 58 108-204 42-99 (168)
432 PRK04148 hypothetical protein; 84.1 4.7 0.0001 35.1 7.2 87 109-234 16-104 (134)
433 COG0289 DapB Dihydrodipicolina 83.8 4 8.6E-05 39.7 7.3 35 110-145 2-36 (266)
434 COG0604 Qor NADPH:quinone redu 83.7 3.7 7.9E-05 41.8 7.5 77 109-202 142-221 (326)
435 PRK00982 acpP acyl carrier pro 83.4 0.97 2.1E-05 35.2 2.5 30 33-62 25-55 (78)
436 TIGR00978 asd_EA aspartate-sem 83.3 1.3 2.9E-05 45.3 4.2 33 111-144 1-33 (341)
437 TIGR01915 npdG NADPH-dependent 83.1 1.7 3.8E-05 41.4 4.7 27 111-137 1-27 (219)
438 PRK14192 bifunctional 5,10-met 83.0 2.3 5E-05 42.3 5.6 28 108-135 157-184 (283)
439 TIGR01745 asd_gamma aspartate- 83.0 3.1 6.8E-05 42.7 6.6 35 111-145 1-36 (366)
440 PRK07117 acyl carrier protein; 83.0 1.1 2.3E-05 35.3 2.5 29 34-62 29-57 (79)
441 PTZ00082 L-lactate dehydrogena 82.5 14 0.00029 37.6 11.1 113 109-240 5-128 (321)
442 PRK14175 bifunctional 5,10-met 82.4 3.6 7.8E-05 40.8 6.6 59 108-205 156-214 (286)
443 PRK07639 acyl carrier protein; 82.1 1.3 2.7E-05 35.5 2.7 29 34-62 29-58 (86)
444 COG0236 AcpP Acyl carrier prot 81.5 1.2 2.5E-05 35.1 2.3 27 36-62 30-57 (80)
445 TIGR01763 MalateDH_bact malate 81.4 15 0.00033 37.0 10.9 105 111-230 2-108 (305)
446 PRK00258 aroE shikimate 5-dehy 81.3 2.9 6.4E-05 41.5 5.7 36 108-146 121-156 (278)
447 PF02571 CbiJ: Precorrin-6x re 81.3 12 0.00026 36.5 9.7 94 111-235 1-96 (249)
448 PRK05447 1-deoxy-D-xylulose 5- 80.9 9.2 0.0002 39.6 9.1 43 110-154 1-45 (385)
449 PF02882 THF_DHG_CYH_C: Tetrah 80.6 4.8 0.0001 36.3 6.2 59 108-205 34-92 (160)
450 cd01490 Ube1_repeat2 Ubiquitin 80.5 14 0.00031 39.0 10.5 109 112-248 1-138 (435)
451 PRK07634 pyrroline-5-carboxyla 80.3 11 0.00023 36.5 9.2 35 110-145 4-39 (245)
452 KOG4022 Dihydropteridine reduc 80.2 44 0.00096 30.0 16.5 97 111-229 4-117 (236)
453 PF10727 Rossmann-like: Rossma 80.0 3.2 7E-05 35.8 4.7 32 110-142 10-41 (127)
454 PRK13304 L-aspartate dehydroge 79.4 15 0.00032 36.2 9.9 34 111-145 2-35 (265)
455 TIGR00517 acyl_carrier acyl ca 79.4 1.6 3.6E-05 33.8 2.5 29 34-62 26-55 (77)
456 cd08259 Zn_ADH5 Alcohol dehydr 79.4 4.9 0.00011 40.4 6.8 34 108-144 161-194 (332)
457 cd01075 NAD_bind_Leu_Phe_Val_D 79.0 5.3 0.00011 37.5 6.3 34 108-145 26-59 (200)
458 TIGR03693 ocin_ThiF_like putat 78.4 12 0.00025 41.1 9.2 84 108-202 127-214 (637)
459 TIGR00243 Dxr 1-deoxy-D-xylulo 78.4 7.9 0.00017 39.9 7.6 44 110-154 1-45 (389)
460 TIGR00507 aroE shikimate 5-deh 78.3 6.7 0.00015 38.7 7.1 34 108-145 115-148 (270)
461 PRK13940 glutamyl-tRNA reducta 77.8 6.5 0.00014 41.4 7.1 77 108-205 179-255 (414)
462 PF01408 GFO_IDH_MocA: Oxidore 77.7 20 0.00042 30.0 9.0 98 112-234 2-115 (120)
463 PLN02696 1-deoxy-D-xylulose-5- 76.8 7.8 0.00017 40.8 7.2 45 108-153 55-100 (454)
464 PRK07066 3-hydroxybutyryl-CoA 76.7 9.5 0.00021 38.7 7.7 85 111-201 8-92 (321)
465 PTZ00374 dihydroxyacetone phos 76.5 1.3 2.8E-05 50.6 1.5 73 349-421 240-317 (1108)
466 TIGR02853 spore_dpaA dipicolin 76.4 7.4 0.00016 38.8 6.8 70 108-201 149-218 (287)
467 PRK08306 dipicolinate synthase 76.3 6.8 0.00015 39.3 6.5 69 109-201 151-219 (296)
468 PRK06718 precorrin-2 dehydroge 76.2 12 0.00027 35.1 7.9 35 108-146 8-42 (202)
469 PRK08655 prephenate dehydrogen 76.2 5.6 0.00012 42.3 6.2 27 111-137 1-27 (437)
470 PF05185 PRMT5: PRMT5 arginine 76.1 6.5 0.00014 41.8 6.6 74 110-198 187-264 (448)
471 TIGR01408 Ube1 ubiquitin-activ 75.8 23 0.00049 41.8 11.4 117 104-248 413-558 (1008)
472 TIGR00518 alaDH alanine dehydr 75.7 10 0.00022 39.4 7.8 73 109-202 166-240 (370)
473 PRK14179 bifunctional 5,10-met 75.6 6.5 0.00014 39.0 6.0 61 108-207 156-216 (284)
474 PRK08057 cobalt-precorrin-6x r 75.5 20 0.00042 35.0 9.3 93 110-236 2-96 (248)
475 PRK14194 bifunctional 5,10-met 75.4 6.3 0.00014 39.4 5.9 59 108-205 157-215 (301)
476 TIGR02717 AcCoA-syn-alpha acet 75.0 1.2E+02 0.0026 32.3 17.1 94 106-243 3-99 (447)
477 PRK06849 hypothetical protein; 75.0 10 0.00022 39.7 7.7 35 109-146 3-37 (389)
478 PRK06130 3-hydroxybutyryl-CoA 74.2 7.9 0.00017 39.0 6.5 40 111-152 5-44 (311)
479 PRK13302 putative L-aspartate 74.2 28 0.00061 34.3 10.2 27 110-137 6-32 (271)
480 COG0743 Dxr 1-deoxy-D-xylulose 74.0 7.8 0.00017 39.4 6.1 44 110-154 1-45 (385)
481 TIGR01470 cysG_Nterm siroheme 73.9 11 0.00024 35.5 7.0 70 108-199 7-76 (205)
482 COG0373 HemA Glutamyl-tRNA red 73.5 12 0.00026 39.1 7.6 76 108-205 176-251 (414)
483 PRK14189 bifunctional 5,10-met 73.5 7.4 0.00016 38.6 5.8 59 108-205 156-214 (285)
484 COG1889 NOP1 Fibrillarin-like 73.4 13 0.00028 34.7 6.8 78 108-202 75-155 (231)
485 cd05213 NAD_bind_Glutamyl_tRNA 73.3 13 0.00029 37.5 7.8 74 108-205 176-251 (311)
486 cd00300 LDH_like L-lactate deh 73.3 21 0.00045 35.9 9.2 112 113-241 1-115 (300)
487 cd01339 LDH-like_MDH L-lactate 73.3 23 0.0005 35.5 9.6 102 113-230 1-105 (300)
488 PRK07819 3-hydroxybutyryl-CoA 73.2 8.3 0.00018 38.4 6.3 38 111-150 6-43 (286)
489 KOG2013 SMT3/SUMO-activating c 72.8 19 0.0004 38.0 8.5 123 107-246 9-141 (603)
490 KOG2018 Predicted dinucleotide 72.8 53 0.0011 32.8 11.2 34 108-144 72-105 (430)
491 COG1712 Predicted dinucleotide 72.7 32 0.00069 32.8 9.3 39 112-152 2-40 (255)
492 PRK00045 hemA glutamyl-tRNA re 72.1 12 0.00026 39.6 7.6 75 108-204 180-254 (423)
493 COG0476 ThiF Dinucleotide-util 71.5 52 0.0011 32.0 11.4 111 105-248 25-160 (254)
494 KOG0023 Alcohol dehydrogenase, 71.4 33 0.00072 34.4 9.6 74 109-202 181-256 (360)
495 PRK09260 3-hydroxybutyryl-CoA 71.4 3 6.4E-05 41.6 2.6 40 111-152 2-41 (288)
496 PF01210 NAD_Gly3P_dh_N: NAD-d 71.2 5.1 0.00011 36.0 3.8 79 112-202 1-79 (157)
497 PRK06019 phosphoribosylaminoim 71.0 15 0.00032 38.2 7.8 68 110-198 2-69 (372)
498 PRK14191 bifunctional 5,10-met 70.8 11 0.00024 37.4 6.3 59 108-205 155-213 (285)
499 cd05188 MDR Medium chain reduc 70.5 15 0.00033 35.3 7.5 34 108-145 133-166 (271)
500 cd08295 double_bond_reductase_ 70.4 12 0.00027 37.9 7.0 33 108-143 150-182 (338)
No 1
>PLN02503 fatty acyl-CoA reductase 2
Probab=100.00 E-value=8.9e-85 Score=696.44 Aligned_cols=547 Identities=72% Similarity=1.119 Sum_probs=440.5
Q ss_pred CCcccccccCCcchhHHHHhhcccceeeeec--cccccccccCC--chhHHHHHHHHHhhhhcee--------eccccce
Q 042694 1 MGALFLNSLSVAPNKFVKAFENNCDLCLLRR--KRSIMHCQGGG--KTTRSSGVSSALKERSTVT--------DTAAGSL 68 (554)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Ff~~GG--~Sl~a~~l~~~l~~~~~v~--------~~~~~~~ 68 (554)
||+||+.+=|.|.+|..+ +-++|.||.|.. +..+-|.+.|| +.+....+.+.+.++-.+. +.++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (605)
T PLN02503 1 MGSLFLSSPSVASNKLIR-VSSKCDWSTLRLKKRVVPVFCQGGGGGDGIRSSGLSSVLAERSRVGSSQQHVAACRDAGSL 79 (605)
T ss_pred CCcccccCcchhhhhhhh-cccccchHHHHhhccccceEeccCCCCCCccccCcchhhhhhhhhccccCccceeecccce
Confidence 999999999999999999 999999997753 34558888855 4555444555555543222 1356678
Q ss_pred eeCCCCCCCcccccccccccCCCCchhHhhhcccchhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---
Q 042694 69 VLSPNGKGHAEIVVQDLVPFGGQATSLVELQDGIGIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--- 145 (554)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--- 145 (554)
..+.++++++++...+..+.... +..+..++..+.+||++++|||||||||||++|+++||+++++|++||++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~ 157 (605)
T PLN02503 80 VLSPNGKGQPEIAVKDLVPYGSS--SAVEMADGIGIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKD 157 (605)
T ss_pred eecCCCCCCCCcccCCCCCCCCC--chhhccCCcchhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCC
Confidence 88888889988888777655542 3444567788999999999999999999999999999999999999998843
Q ss_pred --hhHHHH-------------HHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHH
Q 042694 146 --ELFKCL-------------KQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYD 210 (554)
Q Consensus 146 --~~~~~l-------------~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~ 210 (554)
.+.+|+ ++..+..+.+...+|++++.||+++++|||++++++.+.+++|+|||+||.++++++++
T Consensus 158 ~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~ 237 (605)
T PLN02503 158 KEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYD 237 (605)
T ss_pred chhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHH
Confidence 123333 33333323333468999999999999999999999999999999999999999999999
Q ss_pred HHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccccccccc-CCCCCCChHHHHHHh-
Q 042694 211 IAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSR-RLIPTLDVENEMKLA- 288 (554)
Q Consensus 211 ~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~- 288 (554)
.+.++|+.||.+++++|++++++++|||+||++|||...+.+.|++|+.++.+..+...+..+ ...+..|...++...
T Consensus 238 ~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~ 317 (605)
T PLN02503 238 VAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLAL 317 (605)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHH
Confidence 999999999999999999887889999999999999987799999998554321111000000 001223333222211
Q ss_pred --------------------hh---ccCCCCchHHHHHHHhhhhh--cCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 289 --------------------LE---SKEFSTDGEVAQKMKGLGLE--RGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 289 --------------------~~---~k~~~~~k~~ae~l~e~~~~--~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
++ ..+++++|+++|.++|..+. +.++|++|+||++|.+++++|+|||+++...++
T Consensus 318 d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~ 397 (605)
T PLN02503 318 DSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMD 397 (605)
T ss_pred HhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccc
Confidence 00 12456789999999998873 458999999999999999999999999988888
Q ss_pred ceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCCC
Q 042694 344 PIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASPC 423 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p~ 423 (554)
+++..+++|.++.++++++...|+||||+|+|++++++++........+++||++++..||++|+++.+.+.+++.++|+
T Consensus 398 p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P~ 477 (605)
T PLN02503 398 PIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSPY 477 (605)
T ss_pred hhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCCc
Confidence 88888899999999999999999999999999999996654332223578999999988999999999999999999999
Q ss_pred CCCCCCeEEeCCcchHHHHHHHHHHHHHHHHHHhcccccccccCcchHHHHH-HHHHHHHHHHHHHHhccccccceEEEe
Q 042694 424 VDTKGRPIRVPSMKLFSSMEDFSAHLWRDAIQRSGLTSTANLNGKLPQKLET-ICRKSVEQAKHLADIYEPYTFYGGRFD 502 (554)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ft~~~w~F~ 502 (554)
.+..|+++++|..++++.+..|+.|++.|.+++..+.+..+.++++ .+.++ ..+|.++++++++++++|||+++|.|+
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~ft~~~w~F~ 556 (605)
T PLN02503 478 MDSKGRPIHVPPMKLFSSMEDFSSHLWRDALLRSGLAGMSSSDRKL-SQKLENICAKSVEQAKYLASIYEPYTFYGGRFD 556 (605)
T ss_pred ccccCcceeccCceehhhHHHHHHHHHHHHHHHHhhhcccccChHH-HHHHHHHHHHHHHHHHHHHHHHhhheeCeEEEe
Confidence 9999999999999999999999999988888775433322234444 34443 345677888999999999999999999
Q ss_pred chhHHHHHHhcChhhccccccCCCCCCHHHHHHhhchhHHHHHhhcCCC
Q 042694 503 NSNTERLMEKMSEEEKRKFGFDVGSIDWKEYITNVHIPGLRRHVMKGRG 551 (554)
Q Consensus 503 ~~n~~~L~~~l~~~D~~~F~~d~~~idW~~Y~~~~~~~G~r~y~lke~~ 551 (554)
|+|+++|++.|+++||++|+||++.|||++||+++|++|+|||++|+|+
T Consensus 557 ~~n~~~L~~~ms~~Dr~~F~~D~~~idW~~Y~~~~~i~G~rky~lk~~~ 605 (605)
T PLN02503 557 NSNTQRLMERMSEEEKAEFGFDVGSIDWRDYITNVHIPGLRRHVMKGRG 605 (605)
T ss_pred chHHHHHHHhCCHHHhhccCCCcCCCCHHHHHHHhhhhHHHHHHhccCC
Confidence 9999999999999999999999999999999996689999999999985
No 2
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=100.00 E-value=3.2e-83 Score=651.54 Aligned_cols=428 Identities=39% Similarity=0.603 Sum_probs=370.8
Q ss_pred cchhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc-----------------chhHHHHHHHcCCchhhhcc
Q 042694 102 IGIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN-----------------AELFKCLKQTYGKSYQAFML 164 (554)
Q Consensus 102 ~~i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~-----------------~~~~~~l~~~~~~~~~~~~~ 164 (554)
+++.+||++|+|||||||||+|++|+|+||+.+|+|++||++- .++|+++++..++ ..
T Consensus 4 ~~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~-----~l 78 (467)
T KOG1221|consen 4 SDIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPE-----AL 78 (467)
T ss_pred ccHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCcc-----ce
Confidence 4588999999999999999999999999999999999999762 2456666666554 67
Q ss_pred CcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 165 SKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 165 ~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
+|+.++.||+++++||+|+++.+.+.++||+|||+||+++|+++++.+..+|+.||++++++|++|.+++.|+||||+|+
T Consensus 79 ~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~ 158 (467)
T KOG1221|consen 79 EKVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYS 158 (467)
T ss_pred ecceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCCh--HHHHHHhhhccCCCCchHHHHHHHhhhh--hcCCCcEEEEc
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDV--ENEMKLALESKEFSTDGEVAQKMKGLGL--ERGDIPVVIIR 320 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~k~~~~~k~~ae~l~e~~~--~~~glp~~I~R 320 (554)
++.. +.++|++|+.+....++.++... ..++. .++....+.. +++++|+++|+++|..+ ++.++|++|+|
T Consensus 159 n~~~-~~i~E~~y~~~~~~~~~~~i~~~----~~~~~~~ld~~~~~l~~-~~PNTYtfTKal~E~~i~~~~~~lPivIiR 232 (467)
T KOG1221|consen 159 NCNV-GHIEEKPYPMPETCNPEKILKLD----ENLSDELLDQKAPKLLG-GWPNTYTFTKALAEMVIQKEAENLPLVIIR 232 (467)
T ss_pred eccc-ccccccccCccccCCHHHHHhhh----ccchHHHHHHhhHHhcC-CCCCceeehHhhHHHHHHhhccCCCeEEEc
Confidence 9665 68999999988765555433211 11211 1222233333 57888999999999887 56789999999
Q ss_pred cceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCC-CCCeEEEeeC
Q 042694 321 PSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQK-PDINVYQIAS 399 (554)
Q Consensus 321 p~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~-~~~~vyn~~~ 399 (554)
|++|+++..+|+|||+++.++..+++.++|+|.++.+.+|++...|+||||+|+|+++++++..+.... ++..|||+++
T Consensus 233 PsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~ts 312 (467)
T KOG1221|consen 233 PSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTS 312 (467)
T ss_pred CCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecc
Confidence 999999999999999999999999999999999999999999999999999999999999887665333 3478999999
Q ss_pred CCCCcccHHHHHHHHHhHhccCCCCCCCCCeEEeCCcch-----HHHHHHHHHHHHHHHHHHhcccccccccCcchHHHH
Q 042694 400 SVVNPLVFQDLARLLHEHYSASPCVDTKGRPIRVPSMKL-----FSSMEDFSAHLWRDAIQRSGLTSTANLNGKLPQKLE 474 (554)
Q Consensus 400 ~~~~~it~~e~~~~~~~~~~~~p~~~~~~~~~~~p~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 474 (554)
+..||++|+++.+...+++.+.|+++. +|+|...+ .+.+..+++|++|+++++..+... .+++++.|+|
T Consensus 313 s~~Np~t~~~~~e~~~~~~~~~Pl~~~----iw~P~~~~~sn~~~f~~~~~~~h~lPa~~~d~~~~i~--g~k~~~~k~~ 386 (467)
T KOG1221|consen 313 SNDNPVTWGDFIELALRYFEKIPLEKM----IWYPFGTLTSNPWLFNLAAFLYHTLPAYILDLLLRLL--GKKPRLVKLY 386 (467)
T ss_pred cccCcccHHHHHHHHHHhcccCCcccc----eeccCceeeecHhHHHHHHHHHHHhhHHHHHHHHHHh--CCChhhhHHH
Confidence 999999999999999999999999865 88887755 346778899999999988643321 3566777888
Q ss_pred HHHHHHHHHHHHHHHhccccccceEEEechhHHHHHHhcChhhccccccCCCCCCHHHHHHhhchhHHHHHhhcCCCCCC
Q 042694 475 TICRKSVEQAKHLADIYEPYTFYGGRFDNSNTERLMEKMSEEEKRKFGFDVGSIDWKEYITNVHIPGLRRHVMKGRGIHV 554 (554)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~l~~~D~~~F~~d~~~idW~~Y~~~~~~~G~r~y~lke~~~~~ 554 (554)
+++.+ ..++++||++++|+|+++|+.+|++.|+++||++|+||++++||++|+.+ |++|+|+|++||+++++
T Consensus 387 ~ki~~-------~~~~l~~f~~~~w~Fd~~n~~~L~~~~~~~d~~~f~fd~~~ldW~ey~~~-~i~G~r~~llKe~~e~l 458 (467)
T KOG1221|consen 387 RKIHK-------LVKLLEPFSLFKWIFDNKNTEKLREKMSEEDKRLFNFDMKQLDWEEYFNR-HLLGLRKYLLKESPESL 458 (467)
T ss_pred HHHHH-------HHHhhhhheeceEEecCccHHHHHHhCCHHHHhhcCCCcccCCHHHHHHH-HHHHHHHHHhcCChhhh
Confidence 77654 45899999999999999999999999999999999999999999999998 99999999999998764
No 3
>PLN02996 fatty acyl-CoA reductase
Probab=100.00 E-value=2.2e-69 Score=575.78 Aligned_cols=432 Identities=39% Similarity=0.678 Sum_probs=342.5
Q ss_pred cchhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-----hhHHHH-------------HHHcCCchhhhc
Q 042694 102 IGIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-----ELFKCL-------------KQTYGKSYQAFM 163 (554)
Q Consensus 102 ~~i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-----~~~~~l-------------~~~~~~~~~~~~ 163 (554)
++|.+||++++|||||||||||++|+++||+++++|++|||+.+ ...+|+ ++..+....+..
T Consensus 3 ~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~ 82 (491)
T PLN02996 3 GSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLI 82 (491)
T ss_pred ccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhh
Confidence 46889999999999999999999999999999999999998843 223333 222222222223
Q ss_pred cCcEEEEEccCCCCCCCCCHHH-HHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeec
Q 042694 164 LSKLVPAVGNVCENNLGLEEDL-ADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTA 242 (554)
Q Consensus 164 ~~kv~~v~GDl~~~~lGLs~~~-~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~ 242 (554)
..+++++.||+++++|||++.+ ++.+.+++|+|||+||.+++.++++.+.++|+.||.+++++|++++++++|||+||+
T Consensus 83 ~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~ 162 (491)
T PLN02996 83 SEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTA 162 (491)
T ss_pred hcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeee
Confidence 4799999999999999999877 678888999999999999999899999999999999999999987789999999999
Q ss_pred eecccccceeeccccCCCCCcccccccccccCCCCCCChHHHH--------------------H----Hh-hh---ccCC
Q 042694 243 YVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEM--------------------K----LA-LE---SKEF 294 (554)
Q Consensus 243 ~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------------------~----~~-~~---~k~~ 294 (554)
+|||...+.++|++|+++...... ...|.+++. . .. +. ....
T Consensus 163 ~vyG~~~~~i~E~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (491)
T PLN02996 163 YVCGEKSGLILEKPFHMGETLNGN----------RKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGW 232 (491)
T ss_pred EEecCCCceeeeecCCCccccccc----------ccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCC
Confidence 999987678899988765432100 011111100 0 00 01 1123
Q ss_pred CCchHHHHHHHhhhhh--cCCCcEEEEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhH
Q 042694 295 STDGEVAQKMKGLGLE--RGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADM 372 (554)
Q Consensus 295 ~~~k~~ae~l~e~~~~--~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~ 372 (554)
+.+|..+|.++|..+. ..++|++|+||++|+|+.++|++||+++..+...++..++.|..+.++++++..+|+|||||
T Consensus 233 pn~Y~~TK~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vdd 312 (491)
T PLN02996 233 PNTYVFTKAMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADM 312 (491)
T ss_pred CCchHhhHHHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccH
Confidence 4456666666665542 35899999999999999999999999998777777777788999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCCCCCCCCCeEEeCCcchHH-----HHHHHHH
Q 042694 373 VVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASPCVDTKGRPIRVPSMKLFS-----SMEDFSA 447 (554)
Q Consensus 373 va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~-----~~~~~~~ 447 (554)
||++++++++.... ....+++||++++..+|++|.|+++.+.++++..|+.+..+.++|+|.+.+.. .+..++.
T Consensus 313 vv~a~l~a~~~~~~-~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 391 (491)
T PLN02996 313 VVNAMIVAMAAHAG-GQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWINKEGSPVKVGKGTILSTMASFSLYMTIR 391 (491)
T ss_pred HHHHHHHHHHHhhc-cCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCcCCCCCeEeeCCceecCcHHHHHHHHHHH
Confidence 99999999876321 11235799999987789999999999999999999988777889999887643 3446677
Q ss_pred HHHHHHHHHhcccccccccCcchHHHHHHHHHHHHHHHHHHHhccccccceEEEechhHHHHHHhcChhh---ccccccC
Q 042694 448 HLWRDAIQRSGLTSTANLNGKLPQKLETICRKSVEQAKHLADIYEPYTFYGGRFDNSNTERLMEKMSEEE---KRKFGFD 524 (554)
Q Consensus 448 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~l~~~D---~~~F~~d 524 (554)
|.+|..+++..........++.+.|+++|+.. +++++++++|||+++|.|+|+|+++|++.|+++| |++|+||
T Consensus 392 ~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~~f~~d 467 (491)
T PLN02996 392 YLLPLKALQLVNIILPKRYGDKYTDLNRKIKL----VMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFD 467 (491)
T ss_pred HHhHHHHHHHHHHHhhhccChHHHHHHHHHHH----HHHHHHHhhccccceEEEccHHHHHHHHHCCccccccccEeccC
Confidence 77886666432211011245666777776533 4667899999999999999999999999999955 9999999
Q ss_pred CCCCCHHHHHHhhchhHHHHHhhc
Q 042694 525 VGSIDWKEYITNVHIPGLRRHVMK 548 (554)
Q Consensus 525 ~~~idW~~Y~~~~~~~G~r~y~lk 548 (554)
++.+||++|++++|++|+|+|++|
T Consensus 468 ~~~~~w~~y~~~~~~~g~~~y~~k 491 (491)
T PLN02996 468 PKSIDWEDYMTNVHIPGLVKYVLK 491 (491)
T ss_pred cccCCHHHHHHHhhHHHHHHHhcC
Confidence 999999999998789999999997
No 4
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=100.00 E-value=5.4e-39 Score=315.09 Aligned_cols=238 Identities=32% Similarity=0.483 Sum_probs=154.2
Q ss_pred EecccccccHHHHHHHHhhCCCccEEEEEcc-----hhHHHHHHHcCCc--hhh---hccCcEEEEEccCCCCCCCCCHH
Q 042694 115 VTGATGFLAKVLIEKILRTVPDVGKIFIINA-----ELFKCLKQTYGKS--YQA---FMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 115 ITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-----~~~~~l~~~~~~~--~~~---~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
|||||||||++|+++||++++.+ +|||+.+ ...+|+++..... +.. ...+||+++.||+++++|||+++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~ 79 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE 79 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence 79999999999999999998777 9999854 3466776554432 222 23789999999999999999999
Q ss_pred HHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 185 LADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
+++.|.+++|+||||||.++|..+|++++++||.||++++++|.+. +.++|+|+||+++.+...+.+.|..+++.....
T Consensus 80 ~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~ 158 (249)
T PF07993_consen 80 DYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDL 158 (249)
T ss_dssp HHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SSS-HHH--EE
T ss_pred HhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCcccccccccccccc
Confidence 9999999999999999999999999999999999999999999974 556999999988887765444443332111000
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCC-Ccc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNR-MMD 343 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~-~~~ 343 (554)
. + ......+|.++||+||++++.+.++.|+|++|+|||.|+|. +.+||.+... ...
T Consensus 159 ~-----------~---------~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~---~~~G~~~~~~~~~~ 215 (249)
T PF07993_consen 159 D-----------P---------PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGD---SRTGWWNSDDFFPY 215 (249)
T ss_dssp E----------------------TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-S---SSSS---TTBHHHH
T ss_pred h-----------h---------hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCccccc---CCCceeeccchHHH
Confidence 0 0 00111167888999999999988777999999999999994 4478887655 333
Q ss_pred ceeeeeccceeeeeecCCCcccccchhhHHHHHH
Q 042694 344 PIILYYGKGQLTGFLVDPNGILDVVPADMVVNAT 377 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~ai 377 (554)
.+...+..|..+..+++++..+|++|||+||++|
T Consensus 216 ~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 216 LLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp HHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred HHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 3444456788888878888889999999999986
No 5
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.4e-37 Score=303.70 Aligned_cols=274 Identities=23% Similarity=0.304 Sum_probs=203.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-----hhHHHHHHHcCCc--hhhhccCcEEEEEccCCCCCCCCCH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-----ELFKCLKQTYGKS--YQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-----~~~~~l~~~~~~~--~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
++||+||||||||++|+++||.+.+ .+|||+.+ .+..|+++....+ |.+...++|+++.||+++++|||++
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~ 78 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSE 78 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCH
Confidence 4799999999999999999998654 58998732 3578888877632 5667889999999999999999999
Q ss_pred HHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCc
Q 042694 184 DLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSI 263 (554)
Q Consensus 184 ~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~ 263 (554)
.+++.|.+++|.|||+||.|++..+|+++...||.||.+++++|.+ ++.|+|+||||++|.......-.+..+.+..
T Consensus 79 ~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~-gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~-- 155 (382)
T COG3320 79 RTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAAT-GKPKPLHYVSSISVGETEYYSNFTVDFDEIS-- 155 (382)
T ss_pred HHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhc-CCCceeEEEeeeeeccccccCCCcccccccc--
Confidence 9999999999999999999999999999999999999999999998 6899999999999976532110000010000
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
+..+.. -....+|.++||++|.++..+.++ |+|++|+|||.|.|+++ +|-.+...+..
T Consensus 156 -------------~~~~~~-----~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~---tG~~n~~D~~~ 213 (382)
T COG3320 156 -------------PTRNVG-----QGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSR---TGALNTRDFLT 213 (382)
T ss_pred -------------cccccc-----CccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCc---cCccccchHHH
Confidence 000000 011128999999999999999988 99999999999999877 45444433444
Q ss_pred ceeeee-ccceeeeeecCCCcccccchhhHHHHHHHHHHHHhc----ccC---CCCCeEEEeeCCCCCcccHHHHHHHHH
Q 042694 344 PIILYY-GKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHG----MIQ---KPDINVYQIASSVVNPLVFQDLARLLH 415 (554)
Q Consensus 344 ~i~~~~-~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~----~~~---~~~~~vyn~~~~~~~~it~~e~~~~~~ 415 (554)
.++..+ ..|..| +.+...|++|+|.++.++...+.... ..+ ......|+ .++....+...++.++..
T Consensus 214 Rlv~~~~~lg~~P----~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~-~~~~~~~i~l~~~~~w~~ 288 (382)
T COG3320 214 RLVLGLLQLGIAP----DSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLH-MLTHPDEIGLDEYVDWLI 288 (382)
T ss_pred HHHHHHHHhCCCC----CcccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhhee-cccCCCccchhHHHHhHh
Confidence 433322 345554 45667889998888877665443322 001 11124555 334447899999999988
Q ss_pred h
Q 042694 416 E 416 (554)
Q Consensus 416 ~ 416 (554)
+
T Consensus 289 ~ 289 (382)
T COG3320 289 S 289 (382)
T ss_pred h
Confidence 7
No 6
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.97 E-value=8.1e-31 Score=260.27 Aligned_cols=263 Identities=18% Similarity=0.202 Sum_probs=184.9
Q ss_pred EEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCc
Q 042694 114 FVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEV 193 (554)
Q Consensus 114 lITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~v 193 (554)
|||||+||||++|+++|++.++ +.+|.+++............ ......++.||++++ +++...++++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~~~~~------~~~~~~~~~~Di~d~------~~l~~a~~g~ 67 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFLKDLQ------KSGVKEYIQGDITDP------ESLEEALEGV 67 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccchhhh------cccceeEEEeccccH------HHHHHHhcCC
Confidence 6999999999999999999885 44666655322111111110 123334899999998 9999999999
Q ss_pred cEEEEcCCCCCch--hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccccccc
Q 042694 194 DVIVNSAANTTFD--ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSN 271 (554)
Q Consensus 194 diViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~ 271 (554)
|+|||+||.+... .+.+.++++||.||++++++|++ .++++|||+||.+|.+.... ..++...+...+
T Consensus 68 d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~-~~VkrlVytSS~~vv~~~~~---~~~~~~~dE~~~------ 137 (280)
T PF01073_consen 68 DVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARK-AGVKRLVYTSSISVVFDNYK---GDPIINGDEDTP------ 137 (280)
T ss_pred ceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcCcceeEeccC---CCCcccCCcCCc------
Confidence 9999999988765 36788999999999999999999 49999999999999876210 111111110000
Q ss_pred ccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhh---c--CCCcEEEEccceeeecccCCccccccCCCCcccee
Q 042694 272 SRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLE---R--GDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 272 ~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~---~--~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
++.. ....|..+|+.||+++..+.. + ..+.++++||+.|||+.+..+.. .+.
T Consensus 138 ----~~~~----------~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~---------~~~ 194 (280)
T PF01073_consen 138 ----YPSS----------PLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVP---------RLV 194 (280)
T ss_pred ----cccc----------ccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccc---------hhh
Confidence 1100 001566677788877766543 1 24999999999999987632211 111
Q ss_pred eeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhccc---CCCCCeEEEeeCCCCCccc-HHHHHHHHHhHhccCC
Q 042694 347 LYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMI---QKPDINVYQIASSVVNPLV-FQDLARLLHEHYSASP 422 (554)
Q Consensus 347 ~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~---~~~~~~vyn~~~~~~~~it-~~e~~~~~~~~~~~~p 422 (554)
..+..|......++++...++++|++||.+++.|+..-... ....++.|+++++ .|++ +.||.+.+.+.+|..+
T Consensus 195 ~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~--~p~~~~~~f~~~~~~~~G~~~ 272 (280)
T PF01073_consen 195 KMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDG--EPVPSFWDFMRPLWEALGYPP 272 (280)
T ss_pred HHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECC--CccCcHHHHHHHHHHHCCCCC
Confidence 12233433344567778899999999999999987643221 2345799999999 7999 9999999999999876
Q ss_pred CC
Q 042694 423 CV 424 (554)
Q Consensus 423 ~~ 424 (554)
+.
T Consensus 273 ~~ 274 (280)
T PF01073_consen 273 PK 274 (280)
T ss_pred Cc
Confidence 64
No 7
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.97 E-value=8.1e-31 Score=315.89 Aligned_cols=367 Identities=17% Similarity=0.183 Sum_probs=231.7
Q ss_pred ceeeeecc------ccccccccCCchhHHHHHHHHHhhhhceee-----ccccceeeCC-----CCCCC-----cccccc
Q 042694 25 DLCLLRRK------RSIMHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLVLSP-----NGKGH-----AEIVVQ 83 (554)
Q Consensus 25 ~~~~~~~~------~~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~~~~-----~~~~~-----~~~~~~ 83 (554)
+|+.++.. .+.|||++|||||+|++|+++|++++|+.+ ++.||+.... ...+. .....+
T Consensus 856 ~~~~vl~~~~~~i~~~~~ff~lGgdSL~a~~l~~~l~~~~~~~l~~~~i~~~~ti~~la~~l~~~~~~~~~~~~~~~~~~ 935 (1389)
T TIGR03443 856 LWLELLPNRPATISPDDSFFDLGGHSILATRMIFELRKKLNVELPLGLIFKSPTIKGFAKEVDRLKKGEELADEGDSEIE 935 (1389)
T ss_pred HHHHHhCCCccccCcCcchhhcCccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhhhcccccccccccccc
Confidence 68855542 233999999999999999999999999887 3667653210 00000 000001
Q ss_pred ccccc-CCC-CchhHhhhc-------ccchhhhccCcEEEEecccccccHHHHHHHHhhC-CCccEEEEEcch-----hH
Q 042694 84 DLVPF-GGQ-ATSLVELQD-------GIGIVKFLKAKNFFVTGATGFLAKVLIEKILRTV-PDVGKIFIINAE-----LF 148 (554)
Q Consensus 84 ~~~~l-~~~-~~~~~~~~~-------~~~i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~~~-----~~ 148 (554)
..... ... ..++..+.. .......-..++|||||||||+|++|+++|++++ ....+|+|+.+. ..
T Consensus 936 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~ 1015 (1389)
T TIGR03443 936 EEETVLELDYAKDAKTLVDSLPKSYPSRKELDASTPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGL 1015 (1389)
T ss_pred hhcccccchhhhhhhhhhhcccccCCcccccccCCCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHH
Confidence 00000 000 000000000 0000011235799999999999999999999875 123488887542 23
Q ss_pred HHHHHHcCC--chhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHH
Q 042694 149 KCLKQTYGK--SYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEF 226 (554)
Q Consensus 149 ~~l~~~~~~--~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~l 226 (554)
++++..... .+......+++++.||++++.|||+++.+..+.+++|+|||+||.+++..++..+...|+.||.+++++
T Consensus 1016 ~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~ 1095 (1389)
T TIGR03443 1016 ERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNL 1095 (1389)
T ss_pred HHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHH
Confidence 444332211 011223458999999999999999999999999999999999999999889999889999999999999
Q ss_pred HHHcCCCceEEEEeeceecccccc-eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHH
Q 042694 227 AKQCNKLKLFVQVSTAYVNGQRRG-KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMK 305 (554)
Q Consensus 227 a~~~~~~k~~v~vST~~v~~~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~ 305 (554)
|++ .++++|+|+||.++++.... ...+.....+....++. ..... .......+|.++|+++|.++
T Consensus 1096 a~~-~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~---------~~~~~----~~~~~~~~Y~~sK~~aE~l~ 1161 (1389)
T TIGR03443 1096 CAE-GKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPES---------DDLMG----SSKGLGTGYGQSKWVAEYII 1161 (1389)
T ss_pred HHh-CCCceEEEEeCeeecCcccccchhhhhhhccCCCCCcc---------ccccc----ccccCCCChHHHHHHHHHHH
Confidence 998 47899999999999864210 00000000000000000 00000 00001116888899999998
Q ss_pred hhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeee-ccceeeeeecCCCcccccchhhHHHHHHHHHHHHh
Q 042694 306 GLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYY-GKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQH 384 (554)
Q Consensus 306 e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~-~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~ 384 (554)
+.+.+. |++++|+||+.|+|+...+. |. .......++... ..|.. ++.....|++|||+|+++++.++...
T Consensus 1162 ~~~~~~-g~~~~i~Rpg~v~G~~~~g~--~~-~~~~~~~~~~~~~~~~~~----p~~~~~~~~~~Vddva~ai~~~~~~~ 1233 (1389)
T TIGR03443 1162 REAGKR-GLRGCIVRPGYVTGDSKTGA--TN-TDDFLLRMLKGCIQLGLI----PNINNTVNMVPVDHVARVVVAAALNP 1233 (1389)
T ss_pred HHHHhC-CCCEEEECCCccccCCCcCC--CC-chhHHHHHHHHHHHhCCc----CCCCCccccccHHHHHHHHHHHHhCC
Confidence 877654 89999999999999865431 21 101111111100 11222 24455689999999999999987543
Q ss_pred cccCCCCCeEEEeeCCCCCcccHHHHHHHHHhH
Q 042694 385 GMIQKPDINVYQIASSVVNPLVFQDLARLLHEH 417 (554)
Q Consensus 385 ~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~ 417 (554)
.. .....+||++++ .+++|.++++.+.+.
T Consensus 1234 ~~--~~~~~i~~~~~~--~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1234 PK--ESELAVAHVTGH--PRIRFNDFLGTLKTY 1262 (1389)
T ss_pred cc--cCCCCEEEeCCC--CCCcHHHHHHHHHHh
Confidence 21 123469999988 689999999999764
No 8
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.97 E-value=5.8e-30 Score=263.69 Aligned_cols=266 Identities=15% Similarity=0.164 Sum_probs=182.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|+|||||||||||++|+++|++.++ +|+++++.. ...+...... .......++.++.||+.+. +
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~---~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Di~d~------~ 82 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQ---TVIGLDNFSTGYQHNLDDVRTS-VSEEQWSRFIFIQGDIRKF------T 82 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCCCcchhhhhhhhhc-cccccCCceEEEEccCCCH------H
Confidence 4678999999999999999999999876 455554321 1111111000 0011224788999999987 7
Q ss_pred HHHHHhcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCC
Q 042694 185 LADVIAKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGD 261 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~ 261 (554)
.+..+++++|+|||+||.... ..++....++|+.||.+++++|++. ++++|||+||..+|+... +.+..+..
T Consensus 83 ~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~vyg~~~----~~~~~e~~ 157 (348)
T PRK15181 83 DCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSSTYGDHP----DLPKIEER 157 (348)
T ss_pred HHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHhhCCCC----CCCCCCCC
Confidence 888888999999999997553 2345678999999999999999984 899999999999998632 11111111
Q ss_pred CcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCC
Q 042694 262 SIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRM 341 (554)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~ 341 (554)
.. .+.+ .|..+|..+|.+++.+.+..+++++++||+.|||+...+.... .. .
T Consensus 158 ~~-------------~p~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~-~~--~ 209 (348)
T PRK15181 158 IG-------------RPLS------------PYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAY-SA--V 209 (348)
T ss_pred CC-------------CCCC------------hhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCcc-cc--C
Confidence 10 0111 4666677888877766666699999999999999875432111 00 0
Q ss_pred ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhcc
Q 042694 342 MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSA 420 (554)
Q Consensus 342 ~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~ 420 (554)
...++..+..|....+.++++...|++||||+|++++.++..... ...+.+||++++ ++++++|+++.+.+.++.
T Consensus 210 i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~--~~~~~~yni~~g--~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 210 IPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL--ASKNKVYNVAVG--DRTSLNELYYLIRDGLNL 284 (348)
T ss_pred HHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc--cCCCCEEEecCC--CcEeHHHHHHHHHHHhCc
Confidence 011111112232223457788889999999999999877653211 113579999998 789999999999988864
No 9
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.97 E-value=1.1e-29 Score=239.87 Aligned_cols=259 Identities=18% Similarity=0.174 Sum_probs=200.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|++|||||.||||+..++.+++..++. +|.+++.-.++.-.+.... -...++..+++||+++. +....++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~-~v~~~DkLTYAgn~~~l~~---~~~~~~~~fv~~DI~D~------~~v~~~~ 70 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDD-HVVNLDKLTYAGNLENLAD---VEDSPRYRFVQGDICDR------ELVDRLF 70 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCc-eEEEEecccccCCHHHHHh---hhcCCCceEEeccccCH------HHHHHHH
Confidence 579999999999999999999988874 7888875333222222111 11345889999999998 8888888
Q ss_pred c--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 191 K--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 191 ~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
+ ++|+|+|.||..+.+ ..+..+.++||.||.+||++|++.....+|+||||.-|||+... ++..|+|.++..|
T Consensus 71 ~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~--~~~~FtE~tp~~P 148 (340)
T COG1088 71 KEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGL--DDDAFTETTPYNP 148 (340)
T ss_pred HhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccC--CCCCcccCCCCCC
Confidence 7 699999999987765 46789999999999999999998633359999999999998531 2334555444322
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCC---ccccccCCCCc
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEP---FSGWMEGNRMM 342 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p---~~g~~~~~~~~ 342 (554)
. .+|+.+|+-+..++.......|+|++|.|+++-|||.+.| +|-.+.+
T Consensus 149 s-------------------------SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~n---- 199 (340)
T COG1088 149 S-------------------------SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIIN---- 199 (340)
T ss_pred C-------------------------CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHH----
Confidence 1 1677788888888888887789999999999999998865 3333221
Q ss_pred cceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 343 DPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 343 ~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
+-.|.-..+++++.+.+||++|+|-++|+-..+.... .+++||++++ +..+--|+++.+.+.+++..
T Consensus 200 ------al~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~-----~GE~YNIgg~--~E~~Nlevv~~i~~~l~~~~ 266 (340)
T COG1088 200 ------ALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGK-----IGETYNIGGG--NERTNLEVVKTICELLGKDK 266 (340)
T ss_pred ------HHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCc-----CCceEEeCCC--ccchHHHHHHHHHHHhCccc
Confidence 2234444566999999999999999999988776532 2689999999 78899999999999999865
Q ss_pred C
Q 042694 423 C 423 (554)
Q Consensus 423 ~ 423 (554)
+
T Consensus 267 ~ 267 (340)
T COG1088 267 P 267 (340)
T ss_pred c
Confidence 4
No 10
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=2.1e-28 Score=232.49 Aligned_cols=257 Identities=18% Similarity=0.248 Sum_probs=191.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++||||||+||||+|.+.+|++.|++| +++|+ ...+.+.. ..+.+++||+.+. +.++
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~v---vV~DNL~~g~~~~v~~-----------~~~~f~~gDi~D~------~~L~ 60 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEV---VVLDNLSNGHKIALLK-----------LQFKFYEGDLLDR------ALLT 60 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeE---EEEecCCCCCHHHhhh-----------ccCceEEeccccH------HHHH
Confidence 579999999999999999999988754 44442 11111111 0157899999988 7788
Q ss_pred HHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCC
Q 042694 188 VIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDS 262 (554)
Q Consensus 188 ~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~ 262 (554)
++++ ++|.|||+||..... +.+-+.++.||.||.+|+++|++. +++.|||-||+.|||... ..|++|+.+
T Consensus 61 ~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG~p~----~~PI~E~~~ 135 (329)
T COG1087 61 AVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYGEPT----TSPISETSP 135 (329)
T ss_pred HHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcCCCC----CcccCCCCC
Confidence 7776 799999999986653 456688999999999999999995 899999999999999853 234444333
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcc-ccccCCCC
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFS-GWMEGNRM 341 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~-g~~~~~~~ 341 (554)
..| .+ .|..+|.+.|++........++.++++|-.++.|+..++.- .|-.+...
T Consensus 136 ~~p-------------~N------------PYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~th 190 (329)
T COG1087 136 LAP-------------IN------------PYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATL 190 (329)
T ss_pred CCC-------------CC------------cchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcch
Confidence 221 11 67788889999888777777899999999999997664422 22222222
Q ss_pred ccceeeeeccceeeee--e------cCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHH
Q 042694 342 MDPIILYYGKGQLTGF--L------VDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARL 413 (554)
Q Consensus 342 ~~~i~~~~~~G~~~~~--~------~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~ 413 (554)
.-|++..++.|..+.+ . .|+.+++|+|||.|+|+++++|..+-...+ ...+||++++ +-.|..|+++.
T Consensus 191 Lip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g--~~~~~NLG~G--~G~SV~evi~a 266 (329)
T COG1087 191 LIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGG--SNNIFNLGSG--NGFSVLEVIEA 266 (329)
T ss_pred HHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhCC--ceeEEEccCC--CceeHHHHHHH
Confidence 3333434444444322 1 456789999999999999999988755422 2379999999 79999999999
Q ss_pred HHhHhccC
Q 042694 414 LHEHYSAS 421 (554)
Q Consensus 414 ~~~~~~~~ 421 (554)
+.+..|+.
T Consensus 267 ~~~vtg~~ 274 (329)
T COG1087 267 AKKVTGRD 274 (329)
T ss_pred HHHHhCCc
Confidence 99999965
No 11
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.96 E-value=5.6e-28 Score=236.37 Aligned_cols=266 Identities=19% Similarity=0.182 Sum_probs=189.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.+++|+|||||||||++|++.||.+|+.|+ --+.+... .+-+++... ..+++..+.+||.++ +.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~-gtVR~~~~~k~~~~L~~l~~------a~~~l~l~~aDL~d~------~s 71 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVR-GTVRDPEDEKKTEHLRKLEG------AKERLKLFKADLLDE------GS 71 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEE-EEEcCcchhhhHHHHHhccc------CcccceEEecccccc------ch
Confidence 578999999999999999999999999873 22222221 122333221 356789999999999 89
Q ss_pred HHHHhcCccEEEEcCCCCCchhh--HHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceee-ccccCCCCC
Q 042694 186 ADVIAKEVDVIVNSAANTTFDER--YDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVM-EKPFCMGDS 262 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~~~~--~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~-E~~~~~~~~ 262 (554)
+...+++||.|||+|+.+.|+.. ..++++.+|.||.++|+.|++.+.+||+|++||+.+......... ...++|.
T Consensus 72 f~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~-- 149 (327)
T KOG1502|consen 72 FDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEE-- 149 (327)
T ss_pred HHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccc--
Confidence 99999999999999999998543 558999999999999999999777999999999987654311111 1111111
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCc
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMM 342 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~ 342 (554)
++...+.....+ .+|.-+|.+||+.+....++.|++.+.+-|+.|+||.-.|.+. ..
T Consensus 150 ------------~wsd~~~~~~~~-----~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~------~s 206 (327)
T KOG1502|consen 150 ------------SWSDLDFCRCKK-----LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLN------SS 206 (327)
T ss_pred ------------cCCcHHHHHhhH-----HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccc------hh
Confidence 112222211111 2677778888888888877779999999999999976644221 11
Q ss_pred cceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 343 DPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 343 ~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
...+..+-.|....+ ++....+|+|+|||+|++.+.+.+.. ...|+|+++ ..++.|+++.+.+.+...+
T Consensus 207 ~~~~l~~i~G~~~~~---~n~~~~~VdVrDVA~AHv~a~E~~~a-----~GRyic~~~---~~~~~ei~~~l~~~~P~~~ 275 (327)
T KOG1502|consen 207 LNALLKLIKGLAETY---PNFWLAFVDVRDVALAHVLALEKPSA-----KGRYICVGE---VVSIKEIADILRELFPDYP 275 (327)
T ss_pred HHHHHHHHhcccccC---CCCceeeEeHHHHHHHHHHHHcCccc-----CceEEEecC---cccHHHHHHHHHHhCCCCC
Confidence 111222234443322 45556699999999999999987654 358999987 4569999999999988776
Q ss_pred C
Q 042694 423 C 423 (554)
Q Consensus 423 ~ 423 (554)
.
T Consensus 276 i 276 (327)
T KOG1502|consen 276 I 276 (327)
T ss_pred C
Confidence 4
No 12
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.95 E-value=3e-27 Score=245.05 Aligned_cols=272 Identities=22% Similarity=0.314 Sum_probs=188.5
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcch-----hHHHHHHHcCCch---hhhccCcEEEEEccCCCCCCCCCH
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-----LFKCLKQTYGKSY---QAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-----~~~~l~~~~~~~~---~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+|||||||||||++|+++|+++++.. +|+|+.+. ..+++++...... ......++.++.||++++.+||++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~-~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~ 79 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQA-KVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD 79 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCC-EEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence 58999999999999999999987543 78877532 2334443321110 000115899999999999999999
Q ss_pred HHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCc
Q 042694 184 DLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSI 263 (554)
Q Consensus 184 ~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~ 263 (554)
+++..+.+++|+|||+||.+++..+++.+.+.|+.|+.+++++|.+ .+.++|||+||.++++.... . ...+.+..
T Consensus 80 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~-~~~~~~v~iSS~~v~~~~~~--~--~~~~~~~~ 154 (367)
T TIGR01746 80 AEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAAS-GRAKPLHYVSTISVLAAIDL--S--TVTEDDAI 154 (367)
T ss_pred HHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhh-CCCceEEEEccccccCCcCC--C--Cccccccc
Confidence 9999999999999999999998889999999999999999999998 47888999999999876321 0 01111110
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
.+ +... . ...|..+|+.+|.++..+.+. |++++|+|||.|+|+... |.........
T Consensus 155 ~~-----------~~~~--------~-~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~---g~~~~~~~~~ 210 (367)
T TIGR01746 155 VT-----------PPPG--------L-AGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYT---GAINSSDILW 210 (367)
T ss_pred cc-----------cccc--------c-CCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCC---CCCCchhHHH
Confidence 00 0000 0 015777888888888766554 899999999999997432 2211111111
Q ss_pred ceeee-eccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 344 PIILY-YGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 344 ~i~~~-~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
.++.. ...|..+ .......+++||||++++++.++..... ...+++||++++ ++++|.|+++.+.+ .|..
T Consensus 211 ~~~~~~~~~~~~p---~~~~~~~~~~~vddva~ai~~~~~~~~~--~~~~~~~~v~~~--~~~s~~e~~~~i~~-~g~~ 281 (367)
T TIGR01746 211 RMVKGCLALGAYP---DSPELTEDLTPVDYVARAIVALSSQPAA--SAGGPVFHVVNP--EPVSLDEFLEWLER-AGYN 281 (367)
T ss_pred HHHHHHHHhCCCC---CCCccccCcccHHHHHHHHHHHHhCCCc--ccCCceEEecCC--CCCCHHHHHHHHHH-cCCC
Confidence 11110 1122222 2222367899999999999988754321 011579999998 79999999999998 6653
No 13
>PLN02427 UDP-apiose/xylose synthase
Probab=99.95 E-value=5.2e-27 Score=245.36 Aligned_cols=284 Identities=15% Similarity=0.169 Sum_probs=178.5
Q ss_pred cCcEEEEecccccccHHHHHHHHhhC-CCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTV-PDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+.|+|||||||||||++|+++|++.+ + +|++++... .......+.. ......+++++.||+.++ +.+.
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~---~V~~l~r~~-~~~~~l~~~~-~~~~~~~~~~~~~Dl~d~------~~l~ 81 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH---KVLALDVYN-DKIKHLLEPD-TVPWSGRIQFHRINIKHD------SRLE 81 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC---EEEEEecCc-hhhhhhhccc-cccCCCCeEEEEcCCCCh------HHHH
Confidence 45789999999999999999999873 4 566665321 1111111100 000224789999999987 8888
Q ss_pred HHhcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccc-eeecc-ccCCCCC
Q 042694 188 VIAKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRG-KVMEK-PFCMGDS 262 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~-~i~E~-~~~~~~~ 262 (554)
.+++++|+|||+||.+.. .....+.+..|+.|+.+++++|++. + ++|||+||.++|+...+ .++|. +..+...
T Consensus 82 ~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~ 159 (386)
T PLN02427 82 GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPA 159 (386)
T ss_pred HHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeeeCCCcCCCCCcccccccccc
Confidence 888899999999997543 2334456778999999999999884 4 89999999999986421 11111 1100000
Q ss_pred c--ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCC
Q 042694 263 I--AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNR 340 (554)
Q Consensus 263 ~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~ 340 (554)
. ..++.. +.++.+.. .....|..+|..+|.++....+..+++++|+||+.|||+.....++......
T Consensus 160 ~~~~~e~~~---~~~~~~~~--------~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~ 228 (386)
T PLN02427 160 FYVLKEDES---PCIFGSIE--------KQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSE 228 (386)
T ss_pred ccccccccc---ccccCCCC--------ccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCcccccccccc
Confidence 0 000000 00000000 0001456667777777765555569999999999999987643332100000
Q ss_pred Ccccee----eeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHh
Q 042694 341 MMDPII----LYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHE 416 (554)
Q Consensus 341 ~~~~i~----~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~ 416 (554)
....++ .....|....+.++++..+|+|||||+|++++.++..... ..+++||++++. +++++.|+++.+.+
T Consensus 229 ~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~---~~g~~yni~~~~-~~~s~~el~~~i~~ 304 (386)
T PLN02427 229 GVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPAR---ANGHIFNVGNPN-NEVTVRQLAEMMTE 304 (386)
T ss_pred ccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCccc---ccCceEEeCCCC-CCccHHHHHHHHHH
Confidence 000111 1111222223445667788999999999999988764321 124799999862 38999999999999
Q ss_pred Hhcc
Q 042694 417 HYSA 420 (554)
Q Consensus 417 ~~~~ 420 (554)
.++.
T Consensus 305 ~~g~ 308 (386)
T PLN02427 305 VYAK 308 (386)
T ss_pred Hhcc
Confidence 9885
No 14
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.95 E-value=1.1e-26 Score=259.58 Aligned_cols=266 Identities=21% Similarity=0.323 Sum_probs=183.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
|+|||||||||||++|+++|++.... .+|+++.+. ...++...... ....+++++.||+.++.+|++.+.++.+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g-~~V~~l~R~~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~~~~~~~~~~l 75 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRRQSLSRLEALAAY----WGADRVVPLVGDLTEPGLGLSEADIAEL 75 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCC-CEEEEEECcchHHHHHHHHHh----cCCCcEEEEecccCCccCCcCHHHHHHh
Confidence 47999999999999999999952222 267766542 22222221110 0125789999999999999999999888
Q ss_pred hcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccccc
Q 042694 190 AKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFV 269 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~ 269 (554)
+++|+||||||.+++...+....++|+.||.+++++|++. +.++|||+||.++++...+..+|...+++.
T Consensus 76 -~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~-------- 145 (657)
T PRK07201 76 -GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYEGVFREDDFDEGQ-------- 145 (657)
T ss_pred -cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCccCccccccchhhc--------
Confidence 8999999999998887778888999999999999999985 789999999999988643222222111000
Q ss_pred ccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCc---ccee
Q 042694 270 SNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMM---DPII 346 (554)
Q Consensus 270 ~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~---~~i~ 346 (554)
... ..|..+|+.+|.++.. ..+++++|+||+.|||+... +..++.... ...+
T Consensus 146 -------~~~------------~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~---g~~~~~~~~~~~~~~~ 200 (657)
T PRK07201 146 -------GLP------------TPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRT---GEMDKIDGPYYFFKVL 200 (657)
T ss_pred -------CCC------------CchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCC---CccccCCcHHHHHHHH
Confidence 000 0355566666666542 35899999999999997652 211111000 0111
Q ss_pred eeecc-ceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 347 LYYGK-GQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 347 ~~~~~-G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
...+. .....+.++.....+++||||++++++.++.... ..+++||++++ +++++.|+++.+.+.+|.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~----~~g~~~ni~~~--~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 201 AKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKDG----RDGQTFHLTDP--KPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred HHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCcC----CCCCEEEeCCC--CCCcHHHHHHHHHHHhCCCc
Confidence 11110 0111122344567899999999999988775322 23579999998 79999999999999998765
No 15
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.95 E-value=6.7e-27 Score=260.96 Aligned_cols=266 Identities=20% Similarity=0.227 Sum_probs=184.7
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.+|++|+|||||||||||++|+++|++.++++ +|++++... ...+....+. ....++.++.||+.++ +
T Consensus 2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~-~V~~~d~~~~~~~~~~l~~~----~~~~~v~~~~~Dl~d~------~ 70 (668)
T PLN02260 2 ATYEPKNILITGAAGFIASHVANRLIRNYPDY-KIVVLDKLDYCSNLKNLNPS----KSSPNFKFVKGDIASA------D 70 (668)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCCCC-EEEEEeCCCccchhhhhhhc----ccCCCeEEEECCCCCh------H
Confidence 46889999999999999999999999986655 677776421 1111111110 0234788999999987 5
Q ss_pred HHHHHh--cCccEEEEcCCCCCchh---hHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCC
Q 042694 185 LADVIA--KEVDVIVNSAANTTFDE---RYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCM 259 (554)
Q Consensus 185 ~~~~l~--~~vdiViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~ 259 (554)
....+. .++|+|||+||..+... ...+..++|+.||.+++++|++.+.+++|||+||..+|+....... ....+
T Consensus 71 ~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~-~~~~E 149 (668)
T PLN02260 71 LVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAD-VGNHE 149 (668)
T ss_pred HHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccc-cCccc
Confidence 555543 58999999999876543 3457889999999999999998655899999999999986421000 00001
Q ss_pred CCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCC
Q 042694 260 GDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGN 339 (554)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~ 339 (554)
..+. .+. ..|..+|..+|.++..+.+..+++++|+||++|||+...+. ..+
T Consensus 150 ~~~~-------------~p~------------~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i--- 200 (668)
T PLN02260 150 ASQL-------------LPT------------NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLI--- 200 (668)
T ss_pred cCCC-------------CCC------------CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHH---
Confidence 0000 000 14666677888877766555689999999999999865321 111
Q ss_pred CCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhc
Q 042694 340 RMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYS 419 (554)
Q Consensus 340 ~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~ 419 (554)
..++.....|....++++++..++++||||+|+++..++.... .+++||++++ +++++.|+++.+.+.+|
T Consensus 201 ---~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~-----~~~vyni~~~--~~~s~~el~~~i~~~~g 270 (668)
T PLN02260 201 ---PKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-----VGHVYNIGTK--KERRVIDVAKDICKLFG 270 (668)
T ss_pred ---HHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC-----CCCEEEECCC--CeeEHHHHHHHHHHHhC
Confidence 0111111223222345777888999999999999988765321 2479999998 78999999999999998
Q ss_pred cCC
Q 042694 420 ASP 422 (554)
Q Consensus 420 ~~p 422 (554)
..+
T Consensus 271 ~~~ 273 (668)
T PLN02260 271 LDP 273 (668)
T ss_pred CCC
Confidence 653
No 16
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.95 E-value=1.3e-26 Score=239.69 Aligned_cols=260 Identities=16% Similarity=0.185 Sum_probs=178.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
+++|||||||||||++|+++|++.+.++ ++++++... ......... ....++.++.+|+.++ +.++.
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~--v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~------~~~~~ 68 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDA--VVVVDKLTYAGNLMSLAPV----AQSERFAFEKVDICDR------AELAR 68 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCE--EEEEecCccccchhhhhhc----ccCCceEEEECCCcCh------HHHHH
Confidence 3689999999999999999999987653 334442110 011100000 0123678899999988 77777
Q ss_pred Hhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHc--------CCCceEEEEeeceecccccceeecc
Q 042694 189 IAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQC--------NKLKLFVQVSTAYVNGQRRGKVMEK 255 (554)
Q Consensus 189 l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~--------~~~k~~v~vST~~v~~~~~~~i~E~ 255 (554)
+++ ++|+|||+||..... +.++...++|+.||.+++++|.+. +++++|||+||..+|+...+ ...
T Consensus 69 ~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~--~~~ 146 (355)
T PRK10217 69 VFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHS--TDD 146 (355)
T ss_pred HHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCC--CCC
Confidence 776 499999999986543 356789999999999999999863 35689999999999985321 011
Q ss_pred ccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCcccc
Q 042694 256 PFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGW 335 (554)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~ 335 (554)
+.++..+. .+.. .|..+|..+|.+++...+..+++++|+||+.|||+...+ .++
T Consensus 147 ~~~E~~~~-------------~p~s------------~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~-~~~ 200 (355)
T PRK10217 147 FFTETTPY-------------APSS------------PYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP-EKL 200 (355)
T ss_pred CcCCCCCC-------------CCCC------------hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc-ccH
Confidence 12211110 1111 455667778888777665679999999999999987532 111
Q ss_pred ccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHH
Q 042694 336 MEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLH 415 (554)
Q Consensus 336 ~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~ 415 (554)
+. .++.....|....+.++++...|++||||+|.+++.++.... .+++||++++ +++++.|+++.+.
T Consensus 201 ~~------~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~-----~~~~yni~~~--~~~s~~~~~~~i~ 267 (355)
T PRK10217 201 IP------LMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGK-----VGETYNIGGH--NERKNLDVVETIC 267 (355)
T ss_pred HH------HHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCC-----CCCeEEeCCC--CcccHHHHHHHHH
Confidence 11 111111223222344778889999999999999988875421 2479999999 7999999999999
Q ss_pred hHhccCC
Q 042694 416 EHYSASP 422 (554)
Q Consensus 416 ~~~~~~p 422 (554)
+.+++.+
T Consensus 268 ~~~~~~~ 274 (355)
T PRK10217 268 ELLEELA 274 (355)
T ss_pred HHhcccc
Confidence 9988643
No 17
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.95 E-value=2.2e-26 Score=243.23 Aligned_cols=280 Identities=11% Similarity=0.101 Sum_probs=180.1
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------HHHHHHHcCCchhhhccCc
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------FKCLKQTYGKSYQAFMLSK 166 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------~~~l~~~~~~~~~~~~~~k 166 (554)
...++|+|||||||||||++|+++|++.|.+ |+++++.. .+++.. +......+
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~---V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~ 114 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYE---VAIVDNLCRRLFDHQLGLDSLTPIASIHERVRR-----WKEVSGKE 114 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEeccccccccccccccccccccchHHHHHH-----HHHhhCCc
Confidence 3467899999999999999999999998764 44443110 011110 00001236
Q ss_pred EEEEEccCCCCCCCCCHHHHHHHhc--CccEEEEcCCCCCch------hhHHHHHHHhchHHHHHHHHHHHcCCCc-eEE
Q 042694 167 LVPAVGNVCENNLGLEEDLADVIAK--EVDVIVNSAANTTFD------ERYDIAIDINTRGPCRLMEFAKQCNKLK-LFV 237 (554)
Q Consensus 167 v~~v~GDl~~~~lGLs~~~~~~l~~--~vdiViH~AA~v~~~------~~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~v 237 (554)
+.++.||++++ +.+..+++ ++|+|||+||..... ......+++|+.||.+++++|++. +++ +||
T Consensus 115 v~~v~~Dl~d~------~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-gv~~~~V 187 (442)
T PLN02572 115 IELYVGDICDF------EFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-APDCHLV 187 (442)
T ss_pred ceEEECCCCCH------HHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-CCCccEE
Confidence 88999999988 77777766 599999999874321 123455789999999999999985 665 899
Q ss_pred EEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEE
Q 042694 238 QVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVV 317 (554)
Q Consensus 238 ~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~ 317 (554)
|+||..+||.....++|.+.++.... .++.. +.+..+.+ .|..+|..+|.++....+..|++++
T Consensus 188 ~~SS~~vYG~~~~~~~E~~i~~~~~~-~e~~~---~~~~~P~s------------~Yg~SK~a~E~l~~~~~~~~gl~~v 251 (442)
T PLN02572 188 KLGTMGEYGTPNIDIEEGYITITHNG-RTDTL---PYPKQASS------------FYHLSKVHDSHNIAFTCKAWGIRAT 251 (442)
T ss_pred EEecceecCCCCCCCccccccccccc-ccccc---cCCCCCCC------------cchhHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999863222333322211000 00000 00001111 5667778888888776666799999
Q ss_pred EEccceeeecccCCc---cccccCC-------CCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhccc
Q 042694 318 IIRPSVIESTCKEPF---SGWMEGN-------RMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMI 387 (554)
Q Consensus 318 I~Rp~~V~g~~~~p~---~g~~~~~-------~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~ 387 (554)
++||+.|||+...+. +..+..+ .....++..+..|....+.++++..+|+++|||+|++++.++......
T Consensus 252 ~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~ 331 (442)
T PLN02572 252 DLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKP 331 (442)
T ss_pred EEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhc
Confidence 999999999875431 1111110 001111112223432234577888899999999999999887643211
Q ss_pred CCCCCeEEEeeCCCCCcccHHHHHHHHHhH---hccC
Q 042694 388 QKPDINVYQIASSVVNPLVFQDLARLLHEH---YSAS 421 (554)
Q Consensus 388 ~~~~~~vyn~~~~~~~~it~~e~~~~~~~~---~~~~ 421 (554)
+ ...+||+++. ++++.|+++.+.+. .|..
T Consensus 332 g--~~~i~Nigs~---~~si~el~~~i~~~~~~~g~~ 363 (442)
T PLN02572 332 G--EFRVFNQFTE---QFSVNELAKLVTKAGEKLGLD 363 (442)
T ss_pred C--ceeEEEeCCC---ceeHHHHHHHHHHHHHhhCCC
Confidence 1 2368999753 69999999999998 6643
No 18
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.94 E-value=3.8e-26 Score=235.48 Aligned_cols=271 Identities=16% Similarity=0.138 Sum_probs=177.7
Q ss_pred CcEEEEecccccccHHHHHHHHhh-CCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRT-VPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~-~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
+|+|||||||||+|++|+++|++. ++ +|++++... ....... ...++.++.+|+.++ .+....
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~---~V~~~~r~~-~~~~~~~-------~~~~~~~~~~Dl~~~-----~~~~~~ 64 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDW---EVYGMDMQT-DRLGDLV-------NHPRMHFFEGDITIN-----KEWIEY 64 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCC---eEEEEeCcH-HHHHHhc-------cCCCeEEEeCCCCCC-----HHHHHH
Confidence 368999999999999999999975 34 566665421 1111111 124688999999843 266777
Q ss_pred HhcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 189 IAKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
+.+++|+|||+||.... ..++...+++|+.||.+++++|++. + ++|||+||..+|+...+ .++.++++..
T Consensus 65 ~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~~~~----~~~~ee~~~~- 137 (347)
T PRK11908 65 HVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCPD----EEFDPEASPL- 137 (347)
T ss_pred HHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeeccCCC----cCcCcccccc-
Confidence 78899999999996442 3456778899999999999999985 5 79999999999986421 1122111100
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccC-CCCccc
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEG-NRMMDP 344 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~-~~~~~~ 344 (554)
... +..+. .. .|..+|..+|.+++......+++++|+||+.|||+...++..--.. ......
T Consensus 138 -~~~-------~~~~p---~~------~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~ 200 (347)
T PRK11908 138 -VYG-------PINKP---RW------IYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQ 200 (347)
T ss_pred -ccC-------cCCCc---cc------hHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHH
Confidence 000 00000 00 3455567777777666556799999999999999876432110000 001111
Q ss_pred eeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCCC
Q 042694 345 IILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASPC 423 (554)
Q Consensus 345 i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p~ 423 (554)
++..+..|.-..+.++++..+|+|||+|++++++.++..... ...+++||++++. +.+|++|+++.+.+.++..|.
T Consensus 201 ~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~--~~~g~~yni~~~~-~~~s~~e~~~~i~~~~~~~~~ 276 (347)
T PRK11908 201 FLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDG--VASGKIYNIGNPK-NNHSVRELANKMLELAAEYPE 276 (347)
T ss_pred HHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccc--cCCCCeEEeCCCC-CCcCHHHHHHHHHHHhcCccc
Confidence 111112232223445677789999999999999998765321 1225799999852 479999999999999986553
No 19
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.94 E-value=1.6e-26 Score=243.21 Aligned_cols=252 Identities=17% Similarity=0.150 Sum_probs=172.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+.|+|||||||||||++|+++|++.+++ |+.+++.. .+.+.... ...++..+.+|+.++.
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~---V~~ldr~~~~~~~~~~~~~-------~~~~~~~~~~Di~~~~------- 181 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDE---VIVIDNFFTGRKENLVHLF-------GNPRFELIRHDVVEPI------- 181 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCCCccHhHhhhhc-------cCCceEEEECcccccc-------
Confidence 4579999999999999999999998864 45554321 11111100 1236778899987651
Q ss_pred HHHHhcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccc-eeeccccCCCC
Q 042694 186 ADVIAKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRG-KVMEKPFCMGD 261 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~-~i~E~~~~~~~ 261 (554)
..++|+|||+||.... ..+....+++|+.||.+++++|++. +. +|||+||.+||+...+ .++|..+....
T Consensus 182 ----~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~ 255 (436)
T PLN02166 182 ----LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLEHPQKETYWGNVN 255 (436)
T ss_pred ----ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhCCCCCCCCCccccccCC
Confidence 2479999999996542 3456788999999999999999985 44 8999999999986421 12232111100
Q ss_pred CcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCC
Q 042694 262 SIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRM 341 (554)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~ 341 (554)
+. .+.+ .|..+|..+|.++..+.+..+++++++||++|||+...+..+. .
T Consensus 256 p~-------------~p~s------------~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~-----~ 305 (436)
T PLN02166 256 PI-------------GERS------------CYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGR-----V 305 (436)
T ss_pred CC-------------CCCC------------chHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccc-----h
Confidence 10 0001 4666678888887776666689999999999999764321110 1
Q ss_pred ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 342 MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 342 ~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
...++..+..|....+.++++..+|+++|+|++++++.++... ...+||++++ +++++.|+++.+.+.++..
T Consensus 306 i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~------~~giyNIgs~--~~~Si~ela~~I~~~~g~~ 377 (436)
T PLN02166 306 VSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE------HVGPFNLGNP--GEFTMLELAEVVKETIDSS 377 (436)
T ss_pred HHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC------CCceEEeCCC--CcEeHHHHHHHHHHHhCCC
Confidence 1111111222222234577778899999999999998887532 1359999998 7899999999999998854
No 20
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.94 E-value=3.9e-26 Score=240.63 Aligned_cols=255 Identities=15% Similarity=0.146 Sum_probs=170.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+|||||||||||++|++.|++++++ |+++++....+ .+.... .....++..+.+|+.++
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~---V~~ld~~~~~~-~~~~~~---~~~~~~~~~i~~D~~~~---------- 179 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDS---VIVVDNFFTGR-KENVMH---HFSNPNFELIRHDVVEP---------- 179 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCE---EEEEeCCCccc-hhhhhh---hccCCceEEEECCccCh----------
Confidence 46789999999999999999999998864 45554321111 111100 01124678889998765
Q ss_pred HHhcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccc-eeeccccCCCCCc
Q 042694 188 VIAKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRG-KVMEKPFCMGDSI 263 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~-~i~E~~~~~~~~~ 263 (554)
...++|+|||+||.... ..+....+++|+.||.+++++|++. +. +|||+||..||+.... ...|..+.+..+
T Consensus 180 -~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P- 255 (442)
T PLN02206 180 -ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLQHPQVETYWGNVNP- 255 (442)
T ss_pred -hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHhCCCCCCCCCccccccCCC-
Confidence 12479999999996542 3456788999999999999999985 54 8999999999986421 122221110000
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
..+.. .|..+|..+|.++..+.+..+++++++||+.|||+......+- ...
T Consensus 256 ------------~~~~s------------~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~-----~v~ 306 (442)
T PLN02206 256 ------------IGVRS------------CYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGR-----VVS 306 (442)
T ss_pred ------------CCccc------------hHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccc-----hHH
Confidence 00001 3555567777777665555689999999999999764211110 011
Q ss_pred ceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhcc
Q 042694 344 PIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSA 420 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~ 420 (554)
.++.....+....++++++..+|+++|+|+|++++.++... ...+||++++ +++++.|+++.+.+.++.
T Consensus 307 ~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~------~~g~yNIgs~--~~~sl~Elae~i~~~~g~ 375 (442)
T PLN02206 307 NFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE------HVGPFNLGNP--GEFTMLELAKVVQETIDP 375 (442)
T ss_pred HHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC------CCceEEEcCC--CceeHHHHHHHHHHHhCC
Confidence 11111112222234567777899999999999999887532 1358999998 789999999999999874
No 21
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.94 E-value=1.3e-25 Score=249.49 Aligned_cols=277 Identities=14% Similarity=0.149 Sum_probs=184.8
Q ss_pred cchhhhccCcEEEEecccccccHHHHHHHHhh-CCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCC
Q 042694 102 IGIVKFLKAKNFFVTGATGFLAKVLIEKILRT-VPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLG 180 (554)
Q Consensus 102 ~~i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~-~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lG 180 (554)
.+.+.+.++|+|||||||||+|++|+++|++. ++ +|+++++... ...... ...+++++.||+.++
T Consensus 307 ~~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~---~V~~l~r~~~-~~~~~~-------~~~~~~~~~gDl~d~--- 372 (660)
T PRK08125 307 KPACSAKRRTRVLILGVNGFIGNHLTERLLRDDNY---EVYGLDIGSD-AISRFL-------GHPRFHFVEGDISIH--- 372 (660)
T ss_pred cchhhhhcCCEEEEECCCchHHHHHHHHHHhCCCc---EEEEEeCCch-hhhhhc-------CCCceEEEeccccCc---
Confidence 45567788999999999999999999999975 45 4555543211 111111 124688899999986
Q ss_pred CCHHHHHHHhcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccc-eeeccc
Q 042694 181 LEEDLADVIAKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRG-KVMEKP 256 (554)
Q Consensus 181 Ls~~~~~~l~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~-~i~E~~ 256 (554)
.+..+.+++++|+|||+||.... .......+++|+.||.+++++|++. + ++|||+||.++|+...+ .++|.
T Consensus 373 --~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~~vyg~~~~~~~~E~- 447 (660)
T PRK08125 373 --SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTSEVYGMCTDKYFDED- 447 (660)
T ss_pred --HHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcchhhcCCCCCCCcCcc-
Confidence 23356666899999999997653 3445678899999999999999985 5 79999999999986321 12222
Q ss_pred cCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccc
Q 042694 257 FCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWM 336 (554)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~ 336 (554)
.+..+. . +... ....|..+|..+|.++..+.+..|++++++||++|||+........-
T Consensus 448 ----~~~~~~-----~----p~~~---------p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~ 505 (660)
T PRK08125 448 ----TSNLIV-----G----PINK---------QRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAAR 505 (660)
T ss_pred ----cccccc-----C----CCCC---------CccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCcccccccc
Confidence 110000 0 0000 00046667788888887766666899999999999998653211100
Q ss_pred c-CCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHH
Q 042694 337 E-GNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLH 415 (554)
Q Consensus 337 ~-~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~ 415 (554)
. .......++..+..|....+.++++..+|+++|+|+|++++.++..... ...+++||++++. ++++++|+++.+.
T Consensus 506 ~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~--~~~g~iyni~~~~-~~~s~~el~~~i~ 582 (660)
T PRK08125 506 IGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDN--RCDGQIINIGNPD-NEASIRELAEMLL 582 (660)
T ss_pred ccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhcccc--ccCCeEEEcCCCC-CceeHHHHHHHHH
Confidence 0 0000111111122233333456778889999999999999988764211 1135799999872 3799999999999
Q ss_pred hHhccCC
Q 042694 416 EHYSASP 422 (554)
Q Consensus 416 ~~~~~~p 422 (554)
+..+..+
T Consensus 583 ~~~g~~~ 589 (660)
T PRK08125 583 ASFEKHP 589 (660)
T ss_pred HHhccCc
Confidence 9998654
No 22
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.94 E-value=1.4e-25 Score=227.96 Aligned_cols=255 Identities=17% Similarity=0.201 Sum_probs=177.5
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|||||||||+|++|+++|++.+++. +|++++... .+++.... ...++.++.+|++++ +++.
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~-~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~------~~~~ 66 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDA-EVIVLDKLTYAGNLENLADLE-------DNPRYRFVKGDIGDR------ELVS 66 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCC-EEEEecCCCcchhhhhhhhhc-------cCCCcEEEEcCCcCH------HHHH
Confidence 58999999999999999999877544 666665311 11111110 123678899999988 8888
Q ss_pred HHhcC--ccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCC
Q 042694 188 VIAKE--VDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDS 262 (554)
Q Consensus 188 ~l~~~--vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~ 262 (554)
.+.++ +|+|||+||.+... +..+.+.++|+.|+.+++++|++...-.++||+||..+++.... ..++++..+
T Consensus 67 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~---~~~~~e~~~ 143 (317)
T TIGR01181 67 RLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEK---GDAFTETTP 143 (317)
T ss_pred HHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCC---CCCcCCCCC
Confidence 88776 99999999986543 35677899999999999999987422238999999999886421 112222211
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCc
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMM 342 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~ 342 (554)
. .+.. .|..+|+.+|.+++.+....+++++|+||+.|||+...+ .+++.
T Consensus 144 ~-------------~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~-~~~~~----- 192 (317)
T TIGR01181 144 L-------------APSS------------PYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFP-EKLIP----- 192 (317)
T ss_pred C-------------CCCC------------chHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCc-ccHHH-----
Confidence 0 1111 466667778887776655568999999999999976432 11111
Q ss_pred cceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 343 DPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 343 ~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
.++.....|....+.++++...+++|+||+++++..++.... .+++||++++ .++++.|+++.+.+.++.++
T Consensus 193 -~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-----~~~~~~~~~~--~~~s~~~~~~~i~~~~~~~~ 264 (317)
T TIGR01181 193 -LMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-----VGETYNIGGG--NERTNLEVVETILELLGKDE 264 (317)
T ss_pred -HHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-----CCceEEeCCC--CceeHHHHHHHHHHHhCCCc
Confidence 111111222222234667778999999999999988875321 2479999998 78999999999999998653
No 23
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.94 E-value=8e-26 Score=234.40 Aligned_cols=260 Identities=14% Similarity=0.052 Sum_probs=173.2
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|+|||||||||||++|++.|++.+++ |.++++.....+ .. ....+..+.+|+.+. +.+..
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~---V~~v~r~~~~~~----~~-----~~~~~~~~~~Dl~d~------~~~~~ 81 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHY---IIASDWKKNEHM----SE-----DMFCHEFHLVDLRVM------ENCLK 81 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCE---EEEEEecccccc----cc-----ccccceEEECCCCCH------HHHHH
Confidence 5689999999999999999999998875 444443110000 00 011246788999887 77777
Q ss_pred HhcCccEEEEcCCCCC---c-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 189 IAKEVDVIVNSAANTT---F-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 189 l~~~vdiViH~AA~v~---~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
+.+++|+|||+||.+. + ...+......|+.++.+++++|++. ++++|||+||..+|+......++.++.+.+..
T Consensus 82 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~- 159 (370)
T PLN02695 82 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIYPEFKQLETNVSLKESDAW- 159 (370)
T ss_pred HHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhcCCccccCcCCCcCcccCC-
Confidence 7789999999998753 2 2234556788999999999999984 78999999999999864211011112221100
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDP 344 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~ 344 (554)
+..+.+ .|..+|..+|.++.......|++++|+||+.|||+......+ .......
T Consensus 160 ----------p~~p~s------------~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~---~~~~~~~ 214 (370)
T PLN02695 160 ----------PAEPQD------------AYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGG---REKAPAA 214 (370)
T ss_pred ----------CCCCCC------------HHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCcccc---ccccHHH
Confidence 001111 344456667777666555679999999999999976421100 0000111
Q ss_pred eeeee-ccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 345 IILYY-GKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 345 i~~~~-~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
++..+ ..+....++++++...++++|+|++++++.++... ...+||++++ ++++++|+++.+.+..|..
T Consensus 215 ~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~------~~~~~nv~~~--~~~s~~el~~~i~~~~g~~ 284 (370)
T PLN02695 215 FCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD------FREPVNIGSD--EMVSMNEMAEIALSFENKK 284 (370)
T ss_pred HHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc------CCCceEecCC--CceeHHHHHHHHHHHhCCC
Confidence 11111 11112234577888899999999999998876432 1368999998 7999999999999888864
No 24
>PLN02214 cinnamoyl-CoA reductase
Probab=99.94 E-value=1.3e-25 Score=230.53 Aligned_cols=259 Identities=15% Similarity=0.125 Sum_probs=170.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH--H-HHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF--K-CLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~--~-~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++++|||||||||||++|+++|+++|++| .++.+..- . ........ ...++.++.+|+.++ +
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V---~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~------~ 73 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTV---KGTVRNPDDPKNTHLRELEG-----GKERLILCKADLQDY------E 73 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEE---EEEeCCchhhhHHHHHHhhC-----CCCcEEEEecCcCCh------H
Confidence 357899999999999999999999988754 33322110 0 00111110 124688899999988 8
Q ss_pred HHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeec-eecccccceeeccccCCCCCc
Q 042694 185 LADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTA-YVNGQRRGKVMEKPFCMGDSI 263 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~-~v~~~~~~~i~E~~~~~~~~~ 263 (554)
.+..+++++|+|||+||... ..+...+++|+.||.+++++|++. ++++|||+||. .+|+..... .+.++++.+.
T Consensus 74 ~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~~~~-~~~~~~E~~~- 148 (342)
T PLN02214 74 ALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMDPNRD-PEAVVDESCW- 148 (342)
T ss_pred HHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeeccCCCC-CCcccCcccC-
Confidence 88888889999999999753 456788999999999999999984 78999999996 577642110 0011221110
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
...+.. .. ....|..+|..+|.++..+.+..|++++++||+.|||+...+. . .. ...
T Consensus 149 -------------~~~~~~--~~---p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~--~-~~--~~~ 205 (342)
T PLN02214 149 -------------SDLDFC--KN---TKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPT--I-NA--SLY 205 (342)
T ss_pred -------------CChhhc--cc---cccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC--C-Cc--hHH
Confidence 000000 00 0013555677788877766655699999999999999865431 1 00 001
Q ss_pred ceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhcc
Q 042694 344 PIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSA 420 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~ 420 (554)
.++ ....|....+ ++...++|+|+|||++++.++..... +..||+++. ++++.|+++.+.+.++.
T Consensus 206 ~~~-~~~~g~~~~~---~~~~~~~i~V~Dva~a~~~al~~~~~-----~g~yn~~~~---~~~~~el~~~i~~~~~~ 270 (342)
T PLN02214 206 HVL-KYLTGSAKTY---ANLTQAYVDVRDVALAHVLVYEAPSA-----SGRYLLAES---ARHRGEVVEILAKLFPE 270 (342)
T ss_pred HHH-HHHcCCcccC---CCCCcCeeEHHHHHHHHHHHHhCccc-----CCcEEEecC---CCCHHHHHHHHHHHCCC
Confidence 111 1112222221 34568999999999999998865321 358999864 67999999999998853
No 25
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.94 E-value=1.7e-25 Score=228.19 Aligned_cols=265 Identities=17% Similarity=0.137 Sum_probs=169.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++|||||||||||++|+++|++.|++| .+...+............. .....++.++.||+.++ +.+..
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~------~~~~~ 72 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTV-KATVRDPNDPKKTEHLLAL---DGAKERLHLFKANLLEE------GSFDS 72 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEE-EEEEcCCCchhhHHHHHhc---cCCCCceEEEeccccCc------chHHH
Confidence 46899999999999999999999988755 2222222211111111000 00124788999999998 77888
Q ss_pred HhcCccEEEEcCCCCCc--hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee--cccccceeeccccCCCCCcc
Q 042694 189 IAKEVDVIVNSAANTTF--DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV--NGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v--~~~~~~~i~E~~~~~~~~~~ 264 (554)
+++++|+|||+||.+.. ..+....+++|+.||.+++++|.+..++++|||+||.++ |+... ...+.+.+++.+..
T Consensus 73 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~-~~~~~~~~E~~~~~ 151 (322)
T PLN02662 73 VVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKP-LTPDVVVDETWFSD 151 (322)
T ss_pred HHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcC-CCCCCcCCcccCCC
Confidence 88999999999997643 233347889999999999999987547899999999864 44311 00111111111100
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDP 344 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~ 344 (554)
+ . ........|..+|..+|.++..+.+..+++++++||+.|||+...+..+... ..
T Consensus 152 p----------------~---~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~-----~~ 207 (322)
T PLN02662 152 P----------------A---FCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSA-----EA 207 (322)
T ss_pred h----------------h---HhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchH-----HH
Confidence 0 0 0000000455667777777766655669999999999999986543211110 00
Q ss_pred eeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 345 IILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 345 i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
+..+..|.. ..++..+|+|+|+|+|++++.++..... ...||+++ .+++++|+++.+.+.++..
T Consensus 208 -~~~~~~~~~----~~~~~~~~~i~v~Dva~a~~~~~~~~~~-----~~~~~~~g---~~~s~~e~~~~i~~~~~~~ 271 (322)
T PLN02662 208 -ILNLINGAQ----TFPNASYRWVDVRDVANAHIQAFEIPSA-----SGRYCLVE---RVVHYSEVVKILHELYPTL 271 (322)
T ss_pred -HHHHhcCCc----cCCCCCcCeEEHHHHHHHHHHHhcCcCc-----CCcEEEeC---CCCCHHHHHHHHHHHCCCC
Confidence 111111211 1134568999999999999988764321 24688874 4799999999999987643
No 26
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.93 E-value=2.3e-25 Score=227.25 Aligned_cols=263 Identities=16% Similarity=0.141 Sum_probs=172.2
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEE-Ecch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFI-INAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~-~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.+++|||||||||||++++++|++.|++| ++ .++. ..+.+...... .....+++++.+|++++ +.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V---~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~------~~~ 71 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTV---KATVRDLTDRKKTEHLLAL---DGAKERLKLFKADLLEE------SSF 71 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEE---EEEECCCcchHHHHHHHhc---cCCCCceEEEecCCCCc------chH
Confidence 46899999999999999999999988754 42 3321 11222221110 00134788999999998 788
Q ss_pred HHHhcCccEEEEcCCCCCch--hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccccee-eccccCCCCCc
Q 042694 187 DVIAKEVDVIVNSAANTTFD--ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKV-MEKPFCMGDSI 263 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i-~E~~~~~~~~~ 263 (554)
..+.+++|+|||+||.+... ++....+++|+.||.+++++|++.+++++|||+||..++....... .+..+++.+..
T Consensus 72 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~ 151 (322)
T PLN02986 72 EQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFS 151 (322)
T ss_pred HHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCC
Confidence 88888999999999976542 3345678999999999999998755789999999987643211101 11112211110
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
. + +. .. .....|..+|..+|.++..+.+..+++++++||+.|||+...+..+.. .
T Consensus 152 ~------------p--~~----~~-~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~------~ 206 (322)
T PLN02986 152 D------------P--SL----CR-ETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFS------V 206 (322)
T ss_pred C------------h--HH----hh-ccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCcc------H
Confidence 0 0 00 00 000146667778887777766666999999999999998754321111 0
Q ss_pred ceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhcc
Q 042694 344 PIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSA 420 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~ 420 (554)
..+..+..|.. .+ +....++|+|+|+|++++.++..... ...||+++ .++++.|+++.+.+.++.
T Consensus 207 ~~~~~~~~g~~-~~---~~~~~~~v~v~Dva~a~~~al~~~~~-----~~~yni~~---~~~s~~e~~~~i~~~~~~ 271 (322)
T PLN02986 207 ELIVDFINGKN-LF---NNRFYRFVDVRDVALAHIKALETPSA-----NGRYIIDG---PIMSVNDIIDILRELFPD 271 (322)
T ss_pred HHHHHHHcCCC-CC---CCcCcceeEHHHHHHHHHHHhcCccc-----CCcEEEec---CCCCHHHHHHHHHHHCCC
Confidence 11111111221 11 23457999999999999998865322 24899954 479999999999998764
No 27
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.93 E-value=4.1e-25 Score=226.94 Aligned_cols=266 Identities=16% Similarity=0.180 Sum_probs=170.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++|||||||||||++|+++|++.+++| .+...+......+...... . ...++.++.||++++ +.+.
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~--~--~~~~~~~~~~Dl~d~------~~~~ 75 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAV-NTTVRDPENQKKIAHLRAL--Q--ELGDLKIFGADLTDE------ESFE 75 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEE-EEEECCCCCHHHHHHHHhc--C--CCCceEEEEcCCCCh------HHHH
Confidence 357899999999999999999999988754 2223332211111110000 0 113688899999988 7788
Q ss_pred HHhcCccEEEEcCCCCCch--hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccc-----ceeeccccCCC
Q 042694 188 VIAKEVDVIVNSAANTTFD--ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRR-----GKVMEKPFCMG 260 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~-----~~i~E~~~~~~ 260 (554)
.+.+++|+|||+||...+. .+...++++|+.|+.+++++|.+..++++|||+||..+++... ..++|......
T Consensus 76 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~ 155 (338)
T PLN00198 76 APIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDV 155 (338)
T ss_pred HHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCch
Confidence 8888999999999976543 3344678999999999999998755689999999999987431 12233221100
Q ss_pred CCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCC-ccccccCC
Q 042694 261 DSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEP-FSGWMEGN 339 (554)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p-~~g~~~~~ 339 (554)
... .+. .++ ...|..+|..+|.+++.+.+..+++++++||+.|||+...+ .+.++.
T Consensus 156 ~~~-~~~--------~~p------------~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-- 212 (338)
T PLN00198 156 EFL-TSE--------KPP------------TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-- 212 (338)
T ss_pred hhh-hhc--------CCc------------cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH--
Confidence 000 000 001 11466677888888777666678999999999999987532 111110
Q ss_pred CCccceeeeeccceeeeeec-----CCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHH
Q 042694 340 RMMDPIILYYGKGQLTGFLV-----DPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLL 414 (554)
Q Consensus 340 ~~~~~i~~~~~~G~~~~~~~-----~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~ 414 (554)
.+..+..|......+ ..+...|++||||+|++++.++..... ...|+. ++ .++++.|+++.+
T Consensus 213 -----~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~-----~~~~~~-~~--~~~s~~el~~~i 279 (338)
T PLN00198 213 -----LAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESA-----SGRYIC-CA--ANTSVPELAKFL 279 (338)
T ss_pred -----HHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCc-----CCcEEE-ec--CCCCHHHHHHHH
Confidence 000000111000001 012347999999999999988765321 236754 44 478999999999
Q ss_pred HhHhcc
Q 042694 415 HEHYSA 420 (554)
Q Consensus 415 ~~~~~~ 420 (554)
.+.++.
T Consensus 280 ~~~~~~ 285 (338)
T PLN00198 280 IKRYPQ 285 (338)
T ss_pred HHHCCC
Confidence 987754
No 28
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.93 E-value=2.4e-25 Score=230.07 Aligned_cols=257 Identities=17% Similarity=0.196 Sum_probs=175.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
|+|||||||||||++|+++|++.+.. .++.++... ...+.... ...++.++.+|+.+. +.+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~d~------~~~ 65 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD--SVVNVDKLTYAGNLESLADVS-------DSERYVFEHADICDR------AEL 65 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC--eEEEecCCCccchHHHHHhcc-------cCCceEEEEecCCCH------HHH
Confidence 47999999999999999999998754 244444211 11111100 123577899999988 777
Q ss_pred HHHhc--CccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHc--------CCCceEEEEeeceecccccc--e
Q 042694 187 DVIAK--EVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQC--------NKLKLFVQVSTAYVNGQRRG--K 251 (554)
Q Consensus 187 ~~l~~--~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~--------~~~k~~v~vST~~v~~~~~~--~ 251 (554)
..+++ ++|+|||+||.++. ....+...++|+.||.+++++|++. ++.++|||+||.++|+.... .
T Consensus 66 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~ 145 (352)
T PRK10084 66 DRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE 145 (352)
T ss_pred HHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc
Confidence 77765 58999999998654 2346789999999999999999863 24679999999999986321 0
Q ss_pred ee-cc---ccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 252 VM-EK---PFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 252 i~-E~---~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
+. +. ++++.++ ..+.+ .|..+|..+|.++....+..|++++++||+.|||+
T Consensus 146 ~~~~~~~~~~~E~~~-------------~~p~~------------~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp 200 (352)
T PRK10084 146 VENSEELPLFTETTA-------------YAPSS------------PYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGP 200 (352)
T ss_pred ccccccCCCccccCC-------------CCCCC------------hhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCC
Confidence 00 00 0111111 01111 46666777888777665556899999999999997
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccH
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVF 407 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~ 407 (554)
...+ .+.+ ..++..+..|....+.++++...|+++|||+|++++.++... ..+++||++++ +++++
T Consensus 201 ~~~~-~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~-----~~~~~yni~~~--~~~s~ 266 (352)
T PRK10084 201 YHFP-EKLI------PLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEG-----KAGETYNIGGH--NEKKN 266 (352)
T ss_pred CcCc-cchH------HHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-----CCCceEEeCCC--CcCcH
Confidence 6422 1111 111111112222234467788899999999999998877532 12579999998 78999
Q ss_pred HHHHHHHHhHhccC
Q 042694 408 QDLARLLHEHYSAS 421 (554)
Q Consensus 408 ~e~~~~~~~~~~~~ 421 (554)
.|+++.+.+..+..
T Consensus 267 ~~~~~~i~~~~~~~ 280 (352)
T PRK10084 267 LDVVLTICDLLDEI 280 (352)
T ss_pred HHHHHHHHHHhccc
Confidence 99999999998864
No 29
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.93 E-value=3.1e-25 Score=221.52 Aligned_cols=263 Identities=19% Similarity=0.214 Sum_probs=191.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++.+|+||||+||||.||+++|++.+.. .+|.++|.... ..+..+.. .....++..+.||+.+. ....
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~-~~irv~D~~~~~~~~~~e~~----~~~~~~v~~~~~D~~~~------~~i~ 71 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELK-LEIRVVDKTPTQSNLPAELT----GFRSGRVTVILGDLLDA------NSIS 71 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccc-cEEEEeccCccccccchhhh----cccCCceeEEecchhhh------hhhh
Confidence 4578999999999999999999998753 47777764221 11211110 01256889999999987 7777
Q ss_pred HHhcCccEEEEcCCCCC--chh-hHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 188 VIAKEVDVIVNSAANTT--FDE-RYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~--~~~-~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
....++ .|+||||... +.. +.+...++||.||+++++.|.+. ++++|||+||++|.......+. -+|+.
T Consensus 72 ~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf~g~~~~n---~~E~~--- 143 (361)
T KOG1430|consen 72 NAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVFGGEPIIN---GDESL--- 143 (361)
T ss_pred hhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEeCCeeccc---CCCCC---
Confidence 777889 8888888754 333 58899999999999999999995 9999999999999776431010 01111
Q ss_pred cccccccccCCCC--CCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCc
Q 042694 265 KENFVSNSRRLIP--TLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMM 342 (554)
Q Consensus 265 ~~~~~~~~~~~~~--~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~ 342 (554)
++| ..| .|+.+|..+|+++..+....++..+++||+.|||+.+.-+.
T Consensus 144 ----------p~p~~~~d------------~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~--------- 192 (361)
T KOG1430|consen 144 ----------PYPLKHID------------PYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLL--------- 192 (361)
T ss_pred ----------CCcccccc------------ccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcccc---------
Confidence 112 111 67788888998888776566799999999999998763211
Q ss_pred cceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhc-ccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 343 DPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHG-MIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 343 ~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~-~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
..+...+..|......++.+...|+++++.|+.++++|..... ......+++|+++++ +|+...+++..+.+.+|..
T Consensus 193 ~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~--~p~~~~~~~~~l~~~lg~~ 270 (361)
T KOG1430|consen 193 PKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDD--TPVRFFDFLSPLVKALGYC 270 (361)
T ss_pred HHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCC--CcchhhHHHHHHHHhcCCC
Confidence 1222233445555555677888999999999999999876644 323456899999999 7888888888999999976
Q ss_pred CC
Q 042694 422 PC 423 (554)
Q Consensus 422 p~ 423 (554)
++
T Consensus 271 ~~ 272 (361)
T KOG1430|consen 271 LP 272 (361)
T ss_pred CC
Confidence 55
No 30
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.93 E-value=1.2e-24 Score=224.52 Aligned_cols=265 Identities=13% Similarity=0.097 Sum_probs=173.1
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH--HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF--KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~--~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
|.++|+|||||||||||+++++.|++.+++ |+.+++... ........ ...++..+.+|+.++ +
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~------~ 65 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLELGAE---VYGYSLDPPTSPNLFELLN------LAKKIEDHFGDIRDA------A 65 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHCCCE---EEEEeCCCccchhHHHHHh------hcCCceEEEccCCCH------H
Confidence 356899999999999999999999998865 444432111 11111110 123577899999988 7
Q ss_pred HHHHHhc--CccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCC
Q 042694 185 LADVIAK--EVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCM 259 (554)
Q Consensus 185 ~~~~l~~--~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~ 259 (554)
++..+.+ ++|+|||+||.... ...+...+++|+.|+.+++++|+.....++||++||..+|+.... ..++.+
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~---~~~~~e 142 (349)
T TIGR02622 66 KLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEW---VWGYRE 142 (349)
T ss_pred HHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCC---CCCCcc
Confidence 7877776 47999999996433 234567889999999999999987533789999999999875311 011111
Q ss_pred CCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc-------CCCcEEEEccceeeecccCCc
Q 042694 260 GDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER-------GDIPVVIIRPSVIESTCKEPF 332 (554)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~-------~glp~~I~Rp~~V~g~~~~p~ 332 (554)
..+. .+.. .|..+|..+|.+++..... .+++++++||+.|||+.....
T Consensus 143 ~~~~-------------~p~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~ 197 (349)
T TIGR02622 143 TDPL-------------GGHD------------PYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE 197 (349)
T ss_pred CCCC-------------CCCC------------cchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh
Confidence 1110 1111 4555666666666544321 389999999999999753110
Q ss_pred cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHH
Q 042694 333 SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLAR 412 (554)
Q Consensus 333 ~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~ 412 (554)
.. ....++..+..|.... .++++..+|++||||+|++++.++..........+++||++++..++++..|+++
T Consensus 198 ~~------~~~~~~~~~~~g~~~~-~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~ 270 (349)
T TIGR02622 198 DR------LIPDVIRAFSSNKIVI-IRNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVV 270 (349)
T ss_pred hh------hhHHHHHHHhcCCCeE-ECCCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHH
Confidence 01 1111111122232222 3567888999999999999998776421101112469999975336899999999
Q ss_pred HHHhHhccC
Q 042694 413 LLHEHYSAS 421 (554)
Q Consensus 413 ~~~~~~~~~ 421 (554)
.+.+.++..
T Consensus 271 ~i~~~~~~~ 279 (349)
T TIGR02622 271 DALEFWWGD 279 (349)
T ss_pred HHHHHhcCC
Confidence 998876643
No 31
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.93 E-value=4.8e-25 Score=226.90 Aligned_cols=259 Identities=17% Similarity=0.109 Sum_probs=174.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
|+|||||||||||++|+++|++.|++ |+++++.. .+++...... .......++.++.||+++. +.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~------~~l 70 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYE---VHGLIRRSSSFNTQRIEHIYED-PHNVNKARMKLHYGDLTDS------SNL 70 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCE---EEEEecCCcccchhhhhhhhhc-cccccccceeEEEeccCCH------HHH
Confidence 58999999999999999999998864 45443221 1222211100 0000124688999999987 777
Q ss_pred HHHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCC---ceEEEEeeceecccccceeeccccC
Q 042694 187 DVIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKL---KLFVQVSTAYVNGQRRGKVMEKPFC 258 (554)
Q Consensus 187 ~~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~---k~~v~vST~~v~~~~~~~i~E~~~~ 258 (554)
..+++ ++|+|||+||..... +......++|+.||.+++++|++. ++ ++|||+||..+||... +.+..
T Consensus 71 ~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~vyg~~~----~~~~~ 145 (343)
T TIGR01472 71 RRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSELYGKVQ----EIPQN 145 (343)
T ss_pred HHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHHhhCCCC----CCCCC
Confidence 77776 479999999976532 234566788999999999999984 44 4899999999998632 11222
Q ss_pred CCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccC
Q 042694 259 MGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEG 338 (554)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~ 338 (554)
+..+. .+.. .|..+|..+|.++..+.+..++++++.|+..++|+.... ..+..
T Consensus 146 E~~~~-------------~p~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~~~ 198 (343)
T TIGR01472 146 ETTPF-------------YPRS------------PYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGE--NFVTR 198 (343)
T ss_pred CCCCC-------------CCCC------------hhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCc--cccch
Confidence 21111 1111 456667788888877666668999999999988865311 11100
Q ss_pred CCCccceeeeeccce-eeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhH
Q 042694 339 NRMMDPIILYYGKGQ-LTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEH 417 (554)
Q Consensus 339 ~~~~~~i~~~~~~G~-~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~ 417 (554)
.....+..+..|. ...+.++++...|+++|||+|++++.++.... ..+||++++ +++|+.|+++.+.+.
T Consensus 199 --~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~------~~~yni~~g--~~~s~~e~~~~i~~~ 268 (343)
T TIGR01472 199 --KITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK------PDDYVIATG--ETHSVREFVEVSFEY 268 (343)
T ss_pred --HHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC------CccEEecCC--CceeHHHHHHHHHHH
Confidence 0011111112232 23345778889999999999999998875421 258999998 799999999999999
Q ss_pred hccC
Q 042694 418 YSAS 421 (554)
Q Consensus 418 ~~~~ 421 (554)
+|+.
T Consensus 269 ~g~~ 272 (343)
T TIGR01472 269 IGKT 272 (343)
T ss_pred cCCC
Confidence 8864
No 32
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.93 E-value=1.4e-24 Score=221.83 Aligned_cols=265 Identities=12% Similarity=0.126 Sum_probs=172.2
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
.+|+|||||||||||++|+++|++.|++| .+...+............. .....++..+.+|++++ +.++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V-~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~d~------~~~~~ 73 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTI-NATVRDPKDRKKTDHLLAL---DGAKERLKLFKADLLDE------GSFEL 73 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEE-EEEEcCCcchhhHHHHHhc---cCCCCceEEEeCCCCCc------hHHHH
Confidence 36899999999999999999999988754 2222222211111111100 00124788899999998 78888
Q ss_pred HhcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccccee-eccccCCCCCcc
Q 042694 189 IAKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKV-MEKPFCMGDSIA 264 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i-~E~~~~~~~~~~ 264 (554)
+++++|+|||+||.... .+++...+++|+.|+.+++++|.+..+.++||++||..+++...... .+.+++|..+..
T Consensus 74 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~ 153 (325)
T PLN02989 74 AIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTN 153 (325)
T ss_pred HHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCc
Confidence 88899999999997543 23567889999999999999998754578999999987765321000 111122211110
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDP 344 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~ 344 (554)
|. ........|..+|..+|.++..+.+..|++++|+||+.|||+...+..+.. ..
T Consensus 154 p~-------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~------~~ 208 (325)
T PLN02989 154 PS-------------------FAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFS------VA 208 (325)
T ss_pred hh-------------------HhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCch------HH
Confidence 00 000001146667778888777666666999999999999998765422111 01
Q ss_pred eeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhcc
Q 042694 345 IILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSA 420 (554)
Q Consensus 345 i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~ 420 (554)
.+.....|..+ + .....++++|+|+|++++.++..... ..+||+++ .+++++|+++.+.+.++.
T Consensus 209 ~i~~~~~~~~~-~---~~~~r~~i~v~Dva~a~~~~l~~~~~-----~~~~ni~~---~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 209 VIVELMKGKNP-F---NTTHHRFVDVRDVALAHVKALETPSA-----NGRYIIDG---PVVTIKDIENVLREFFPD 272 (325)
T ss_pred HHHHHHcCCCC-C---CCcCcCeeEHHHHHHHHHHHhcCccc-----CceEEEec---CCCCHHHHHHHHHHHCCC
Confidence 11111112211 1 12346899999999999988765321 25899954 479999999999999864
No 33
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.93 E-value=5.1e-25 Score=223.26 Aligned_cols=246 Identities=13% Similarity=0.106 Sum_probs=157.2
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH-HHHHh-
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL-ADVIA- 190 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~-~~~l~- 190 (554)
|||||||||||++|+++|++.|.++ +..+++..... .. .....+|+.+.. +.++ .+.+.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~--v~~~~~~~~~~---~~-----------~~~~~~~~~d~~---~~~~~~~~~~~ 62 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITD--ILVVDNLKDGT---KF-----------VNLVDLDIADYM---DKEDFLAQIMA 62 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCce--EEEecCCCcch---HH-----------Hhhhhhhhhhhh---hHHHHHHHHhc
Confidence 7999999999999999999987543 44444321000 00 011234443320 1122 33333
Q ss_pred ----cCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccc-eeeccccCCCCCcc
Q 042694 191 ----KEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRG-KVMEKPFCMGDSIA 264 (554)
Q Consensus 191 ----~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~-~i~E~~~~~~~~~~ 264 (554)
.++|+|||+||.... .......++.|+.||.+++++|++. +. +|||+||+++|+...+ .++|.. +
T Consensus 63 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~~~~~~~~E~~-----~-- 133 (308)
T PRK11150 63 GDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTDDFIEERE-----Y-- 133 (308)
T ss_pred ccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCcCCCCCCccCC-----C--
Confidence 269999999985432 1234567899999999999999985 55 6999999999986421 122211 0
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDP 344 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~ 344 (554)
..+.+ .|..+|..+|.+++.+....+++++++||+.|||+...+ .+.+.. ....
T Consensus 134 -----------~~p~~------------~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~-~~~~~~--~~~~ 187 (308)
T PRK11150 134 -----------EKPLN------------VYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGH-KGSMAS--VAFH 187 (308)
T ss_pred -----------CCCCC------------HHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCC-CCccch--hHHH
Confidence 01111 345556777777766655568999999999999976532 111110 0000
Q ss_pred eeeeeccceee-eeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhcc
Q 042694 345 IILYYGKGQLT-GFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSA 420 (554)
Q Consensus 345 i~~~~~~G~~~-~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~ 420 (554)
+...+..|..+ .+.++++..+|++||||+|++++.++... .+.+||++++ +++++.|+++.+.+..+.
T Consensus 188 ~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~------~~~~yni~~~--~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 188 LNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG------VSGIFNCGTG--RAESFQAVADAVLAYHKK 256 (308)
T ss_pred HHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC------CCCeEEcCCC--CceeHHHHHHHHHHHhCC
Confidence 00112223222 23355667899999999999998877542 1359999998 789999999999999875
No 34
>PLN02650 dihydroflavonol-4-reductase
Probab=99.92 E-value=2.6e-24 Score=222.19 Aligned_cols=264 Identities=16% Similarity=0.176 Sum_probs=166.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
.++|||||||||||++|+++|++.+.+| .+...+....+.+...... .....++.++.||+.++ +.++.+
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V-~~~~r~~~~~~~~~~~~~~---~~~~~~~~~v~~Dl~d~------~~~~~~ 74 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGYTV-RATVRDPANVKKVKHLLDL---PGATTRLTLWKADLAVE------GSFDDA 74 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCCEE-EEEEcCcchhHHHHHHHhc---cCCCCceEEEEecCCCh------hhHHHH
Confidence 5689999999999999999999988754 2222222222222211100 00123688899999988 778888
Q ss_pred hcCccEEEEcCCCCCch--hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccc-cCCCCCcccc
Q 042694 190 AKEVDVIVNSAANTTFD--ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKP-FCMGDSIAKE 266 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~--~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~-~~~~~~~~~~ 266 (554)
++++|+|||+||..... .+....+++|+.||.+++++|.+..++++|||+||.++++...+ +.+ +++...
T Consensus 75 ~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~---~~~~~~E~~~---- 147 (351)
T PLN02650 75 IRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEH---QKPVYDEDCW---- 147 (351)
T ss_pred HhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCC---CCCccCcccC----
Confidence 88999999999976542 23357889999999999999998544789999999977654211 011 111100
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCc--cccccCCCCccc
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPF--SGWMEGNRMMDP 344 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~--~g~~~~~~~~~~ 344 (554)
...+... ........|..+|..+|.++..+.+..|++++++||++|||+...+. +..+. .
T Consensus 148 ----------~~~~~~~--~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~------~ 209 (351)
T PLN02650 148 ----------SDLDFCR--RKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLIT------A 209 (351)
T ss_pred ----------Cchhhhh--ccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHH------H
Confidence 0000000 00000013566677777777766666799999999999999865421 11110 0
Q ss_pred eeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhcc
Q 042694 345 IILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSA 420 (554)
Q Consensus 345 i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~ 420 (554)
+. ...|....+ + .....|+++|+|+|++++.++..... ..+|+ +++ .++++.|+++.+.+.++.
T Consensus 210 -~~-~~~~~~~~~-~-~~~~r~~v~V~Dva~a~~~~l~~~~~-----~~~~i-~~~--~~~s~~el~~~i~~~~~~ 273 (351)
T PLN02650 210 -LS-LITGNEAHY-S-IIKQGQFVHLDDLCNAHIFLFEHPAA-----EGRYI-CSS--HDATIHDLAKMLREKYPE 273 (351)
T ss_pred -HH-HhcCCcccc-C-cCCCcceeeHHHHHHHHHHHhcCcCc-----CceEE-ecC--CCcCHHHHHHHHHHhCcc
Confidence 00 001111101 1 11246999999999999988764321 24684 455 578999999999997763
No 35
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.92 E-value=1.6e-24 Score=220.01 Aligned_cols=250 Identities=24% Similarity=0.270 Sum_probs=175.7
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK 191 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~ 191 (554)
+|||||||||||++|++.|++.+++| +.++..... ... ....+..+.+|+.+. +....+.+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V---~~~~r~~~~-----~~~-----~~~~~~~~~~d~~~~------~~~~~~~~ 62 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDV---RGLDRLRDG-----LDP-----LLSGVEFVVLDLTDR------DLVDELAK 62 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeE---EEEeCCCcc-----ccc-----cccccceeeecccch------HHHHHHHh
Confidence 49999999999999999999988765 333321000 000 013567889999887 67777777
Q ss_pred Cc-cEEEEcCCCCCchhh----HHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccc-c-eeeccccCCCCCcc
Q 042694 192 EV-DVIVNSAANTTFDER----YDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRR-G-KVMEKPFCMGDSIA 264 (554)
Q Consensus 192 ~v-diViH~AA~v~~~~~----~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~-~-~i~E~~~~~~~~~~ 264 (554)
.+ |+|||+||....... +.....+|+.||.+++++|++ .++++|||.||.++++... + .++|.. .+.
T Consensus 63 ~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~ss~~~~~~~~~~~~~~E~~----~~~- 136 (314)
T COG0451 63 GVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFASSVSVVYGDPPPLPIDEDL----GPP- 136 (314)
T ss_pred cCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeCCCceECCCCCCCCccccc----CCC-
Confidence 77 999999999876443 346899999999999999998 6899999988888777531 1 222221 000
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCc-cccccCCCCcc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPF-SGWMEGNRMMD 343 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~-~g~~~~~~~~~ 343 (554)
.+.+ .|..+|..+|.++.......|++++|+||+.|||+...+. +++.- .
T Consensus 137 ------------~p~~------------~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~-----~ 187 (314)
T COG0451 137 ------------RPLN------------PYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVV-----S 187 (314)
T ss_pred ------------CCCC------------HHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcH-----H
Confidence 0000 2455567777777666555689999999999999876542 22211 1
Q ss_pred ceeeeeccce-eeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCC-cccHHHHHHHHHhHhccC
Q 042694 344 PIILYYGKGQ-LTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVN-PLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 344 ~i~~~~~~G~-~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~-~it~~e~~~~~~~~~~~~ 421 (554)
.++.....|. ...+.++.....++++|||++.+++.++..... . +||++++ . +++.+|+.+.+.+..+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-----~-~~ni~~~--~~~~~~~e~~~~~~~~~~~~ 259 (314)
T COG0451 188 AFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG-----G-VFNIGSG--TAEITVRELAEAVAEAVGSK 259 (314)
T ss_pred HHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC-----c-EEEeCCC--CCcEEHHHHHHHHHHHhCCC
Confidence 1111122233 234556667778999999999999998875332 2 9999998 5 899999999999999987
Q ss_pred CC
Q 042694 422 PC 423 (554)
Q Consensus 422 p~ 423 (554)
+.
T Consensus 260 ~~ 261 (314)
T COG0451 260 AP 261 (314)
T ss_pred Cc
Confidence 55
No 36
>PLN02240 UDP-glucose 4-epimerase
Probab=99.92 E-value=4.2e-24 Score=220.68 Aligned_cols=268 Identities=14% Similarity=0.160 Sum_probs=175.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---h---HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---L---FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~---~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
+++++|+|||||||+|++|+++|++++. +|++++.. . ..++...... ...++..+.+|+.++
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~---- 70 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGY---KVVVIDNLDNSSEEALRRVKELAGD-----LGDNLVFHKVDLRDK---- 70 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCCcchHHHHHHHHHhhcc-----cCccceEEecCcCCH----
Confidence 3568999999999999999999998775 45555321 1 1122211110 124678899999987
Q ss_pred CHHHHHHHhc--CccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccc
Q 042694 182 EEDLADVIAK--EVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKP 256 (554)
Q Consensus 182 s~~~~~~l~~--~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~ 256 (554)
+.+..+++ ++|+|||+||.... ...+...++.|+.++.+++++|++ .++++|||+||+.+|+... +.+
T Consensus 71 --~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~Ss~~vyg~~~----~~~ 143 (352)
T PLN02240 71 --EALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAK-HGCKKLVFSSSATVYGQPE----EVP 143 (352)
T ss_pred --HHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEccHHHhCCCC----CCC
Confidence 77777665 69999999997543 235667899999999999999988 4789999999999987532 112
Q ss_pred cCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh-hcCCCcEEEEccceeeecccCCcccc
Q 042694 257 FCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL-ERGDIPVVIIRPSVIESTCKEPFSGW 335 (554)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~-~~~glp~~I~Rp~~V~g~~~~p~~g~ 335 (554)
+++..+. .+.+ .|..+|..+|.++..+. ...+++++++|++.|||+.....-|.
T Consensus 144 ~~E~~~~-------------~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~ 198 (352)
T PLN02240 144 CTEEFPL-------------SATN------------PYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGE 198 (352)
T ss_pred CCCCCCC-------------CCCC------------HHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccC
Confidence 2222111 1111 34455667777766543 23579999999999999654221111
Q ss_pred ccCC--CCccceeeeeccceee--eee------cCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcc
Q 042694 336 MEGN--RMMDPIILYYGKGQLT--GFL------VDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPL 405 (554)
Q Consensus 336 ~~~~--~~~~~i~~~~~~G~~~--~~~------~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~i 405 (554)
-... ....+.+.....|..+ .+. +++....++|+|+|+|++++.++......+...+++||++++ +++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~--~~~ 276 (352)
T PLN02240 199 DPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTG--KGT 276 (352)
T ss_pred CCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCC--CcE
Confidence 0000 0000111111111111 111 256778999999999999988876431111223579999998 799
Q ss_pred cHHHHHHHHHhHhccC
Q 042694 406 VFQDLARLLHEHYSAS 421 (554)
Q Consensus 406 t~~e~~~~~~~~~~~~ 421 (554)
|++|+++.+.+.++..
T Consensus 277 s~~el~~~i~~~~g~~ 292 (352)
T PLN02240 277 SVLEMVAAFEKASGKK 292 (352)
T ss_pred eHHHHHHHHHHHhCCC
Confidence 9999999999999864
No 37
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.2e-24 Score=202.26 Aligned_cols=253 Identities=20% Similarity=0.242 Sum_probs=183.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+..++|+||||.||+|++.+..+...-|+. ++.+++.-. ...+.+. ....+-.++++|+.+.
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~-~~v~idkL~~~s~~~~l~~~-------~n~p~ykfv~~di~~~------ 69 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFINYLVDKYPDY-KFVNLDKLDYCSNLKNLEPV-------RNSPNYKFVEGDIADA------ 69 (331)
T ss_pred CccceEEEecCcCcchhhhhhhcccCCCCC-cEEEEeecccccccchhhhh-------ccCCCceEeeccccch------
Confidence 344899999999999999999999987776 555554311 1112111 1345778999999887
Q ss_pred HHHHHHh--cCccEEEEcCCCCCchh---hHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccC
Q 042694 184 DLADVIA--KEVDVIVNSAANTTFDE---RYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFC 258 (554)
Q Consensus 184 ~~~~~l~--~~vdiViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~ 258 (554)
.....+. +++|.|+|.||..+.+. +.-++.+.|+.+|..|++.++..+++++||||||..|||+..+ ....
T Consensus 70 ~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~----~~~~ 145 (331)
T KOG0747|consen 70 DLVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDE----DAVV 145 (331)
T ss_pred HHHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccc----cccc
Confidence 4444444 48999999999877654 3446788999999999999999889999999999999998642 1111
Q ss_pred -CCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCC---ccc
Q 042694 259 -MGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEP---FSG 334 (554)
Q Consensus 259 -~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p---~~g 334 (554)
+...+ .| .+ .|+.+|..+|.+.....+..|+|++|+|.++||||.+.+ +|.
T Consensus 146 ~E~s~~------------nP-tn------------pyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipk 200 (331)
T KOG0747|consen 146 GEASLL------------NP-TN------------PYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPK 200 (331)
T ss_pred cccccC------------CC-CC------------chHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHH
Confidence 10000 01 01 455566777777777667789999999999999998755 343
Q ss_pred cccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHH
Q 042694 335 WMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLL 414 (554)
Q Consensus 335 ~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~ 414 (554)
++.- ...|.--..++++...+.+++|+|+++++-+++.+ +. .++|||+++. .+.+..|+++.+
T Consensus 201 Fi~l----------~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K-g~----~geIYNIgtd--~e~~~~~l~k~i 263 (331)
T KOG0747|consen 201 FIKL----------AMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK-GE----LGEIYNIGTD--DEMRVIDLAKDI 263 (331)
T ss_pred HHHH----------HHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc-CC----ccceeeccCc--chhhHHHHHHHH
Confidence 3321 11122223457888889999999999998887765 32 2589999998 788999999999
Q ss_pred HhHhcc
Q 042694 415 HEHYSA 420 (554)
Q Consensus 415 ~~~~~~ 420 (554)
.+.+.+
T Consensus 264 ~eli~~ 269 (331)
T KOG0747|consen 264 CELFEK 269 (331)
T ss_pred HHHHHH
Confidence 988876
No 38
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.92 E-value=4.1e-24 Score=215.45 Aligned_cols=228 Identities=18% Similarity=0.196 Sum_probs=149.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||||||||||++|+++|++.+ + |+.++... ..+.||+.++ +.+..+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~---V~~~~~~~--------------------~~~~~Dl~d~------~~~~~~~ 50 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-N---LIALDVHS--------------------TDYCGDFSNP------EGVAETV 50 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-C---EEEecccc--------------------ccccCCCCCH------HHHHHHH
Confidence 479999999999999999999876 4 34444210 1256899887 7777776
Q ss_pred c--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 191 K--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 191 ~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
+ ++|+||||||..... ..++..+++|+.||.+++++|++. +. +|||+||.+||+... +.+++|.++.
T Consensus 51 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~~~~----~~p~~E~~~~-- 122 (299)
T PRK09987 51 RKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFPGTG----DIPWQETDAT-- 122 (299)
T ss_pred HhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEECCCC----CCCcCCCCCC--
Confidence 6 589999999987543 356777899999999999999985 54 799999999998642 2344443321
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccce
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPI 345 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i 345 (554)
.+.+ .|..+|..+|.++.. ...+.+|+||++|||+....+ +. .+
T Consensus 123 -----------~P~~------------~Yg~sK~~~E~~~~~----~~~~~~ilR~~~vyGp~~~~~---~~------~~ 166 (299)
T PRK09987 123 -----------APLN------------VYGETKLAGEKALQE----HCAKHLIFRTSWVYAGKGNNF---AK------TM 166 (299)
T ss_pred -----------CCCC------------HHHHHHHHHHHHHHH----hCCCEEEEecceecCCCCCCH---HH------HH
Confidence 1111 233445555555432 245789999999999754221 11 11
Q ss_pred eeeeccceeeeeecC--CCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhc
Q 042694 346 ILYYGKGQLTGFLVD--PNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYS 419 (554)
Q Consensus 346 ~~~~~~G~~~~~~~~--~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~ 419 (554)
+.....|....+.++ .....+...+|+++.++..++.... ...+||++++ +++|+.|+++.+.+..+
T Consensus 167 ~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~-----~~giyni~~~--~~~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 167 LRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS--GTTTWHDYAALVFEEAR 235 (299)
T ss_pred HHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCC-----CCCeEEeeCC--CCccHHHHHHHHHHHHH
Confidence 111111211122233 2222344557777777776553211 1359999998 78999999999987654
No 39
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.91 E-value=1.1e-23 Score=217.65 Aligned_cols=268 Identities=15% Similarity=0.161 Sum_probs=167.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.+++|||||||||||++|+++|++.+.+ |+++.+.. ...+..... ...++.++.+|+.++ +.+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~------~~~ 73 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYT---VHATLRDPAKSLHLLSKWK------EGDRLRLFRADLQEE------GSF 73 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCChHHHHHHHHhhc------cCCeEEEEECCCCCH------HHH
Confidence 4679999999999999999999998764 44443221 111111111 124688999999988 788
Q ss_pred HHHhcCccEEEEcCCCCCch-----hhHHH-----HHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceee-cc
Q 042694 187 DVIAKEVDVIVNSAANTTFD-----ERYDI-----AIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVM-EK 255 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~~-----~~~~~-----~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~-E~ 255 (554)
..+.+++|+|||+||..... .+++. .++.|+.|+.+++++|++..++++||++||.++|+.....-. ..
T Consensus 74 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 153 (353)
T PLN02896 74 DEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRA 153 (353)
T ss_pred HHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCC
Confidence 88888999999999976432 23333 345567999999999987545889999999999975310000 00
Q ss_pred ccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCC-ccc
Q 042694 256 PFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEP-FSG 334 (554)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p-~~g 334 (554)
++++... .+.+. ..........|..+|..+|.++..+.+..+++++++||+.|||+...+ ++.
T Consensus 154 ~~~E~~~--------------~p~~~--~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~ 217 (353)
T PLN02896 154 VVDETCQ--------------TPIDH--VWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPS 217 (353)
T ss_pred ccCcccC--------------CcHHH--hhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCc
Confidence 1111100 00000 000000001466677888888777666679999999999999986543 233
Q ss_pred cccCCCCccceeeeeccceeeeeec---CCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHH
Q 042694 335 WMEGNRMMDPIILYYGKGQLTGFLV---DPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLA 411 (554)
Q Consensus 335 ~~~~~~~~~~i~~~~~~G~~~~~~~---~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~ 411 (554)
++... ..+ ..+.+......+ ......|+|+|||+|++++.++..... ..+|+++ + .++++.|++
T Consensus 218 ~~~~~--~~~---~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~-----~~~~~~~-~--~~~s~~el~ 284 (353)
T PLN02896 218 SIQVL--LSP---ITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA-----EGRYICC-V--DSYDMSELI 284 (353)
T ss_pred hHHHH--HHH---hcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCc-----CccEEec-C--CCCCHHHHH
Confidence 22210 000 001111000000 111236999999999999998764221 2468654 4 589999999
Q ss_pred HHHHhHhcc
Q 042694 412 RLLHEHYSA 420 (554)
Q Consensus 412 ~~~~~~~~~ 420 (554)
+.+.+.++.
T Consensus 285 ~~i~~~~~~ 293 (353)
T PLN02896 285 NHLSKEYPC 293 (353)
T ss_pred HHHHHhCCC
Confidence 999998863
No 40
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.91 E-value=3.5e-24 Score=208.14 Aligned_cols=231 Identities=21% Similarity=0.326 Sum_probs=161.2
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcC
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKE 192 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~ 192 (554)
|||||||||||++|+++|+++++.| +.+.+.+....... ...++..+.+|+.+. +.++.+.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v--~~~~~~~~~~~~~~---------~~~~~~~~~~dl~~~------~~~~~~~~~ 63 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEV--IVLSRSSNSESFEE---------KKLNVEFVIGDLTDK------EQLEKLLEK 63 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEE--EEEESCSTGGHHHH---------HHTTEEEEESETTSH------HHHHHHHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcc--cccccccccccccc---------ccceEEEEEeecccc------ccccccccc
Confidence 7999999999999999999998764 22222221111111 112788999999977 888888875
Q ss_pred --ccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccc
Q 042694 193 --VDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKEN 267 (554)
Q Consensus 193 --vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~ 267 (554)
+|+|||+||.... ........+.|+.++.+++++|++. ++++|+|+||..+|+... +.++.+..+.
T Consensus 64 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~~----~~~~~e~~~~---- 134 (236)
T PF01370_consen 64 ANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDPD----GEPIDEDSPI---- 134 (236)
T ss_dssp HTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSSS----SSSBETTSGC----
T ss_pred cCceEEEEeeccccccccccccccccccccccccccccccccc-cccccccccccccccccc----cccccccccc----
Confidence 5999999998642 2456788999999999999999995 679999999999999752 2222222211
Q ss_pred ccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceee
Q 042694 268 FVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIIL 347 (554)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~ 347 (554)
.+.+ .|..+|..+|.+++...+..+++++++||+.|||+. .+ .+... .....++.
T Consensus 135 ---------~~~~------------~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~-~~-~~~~~--~~~~~~~~ 189 (236)
T PF01370_consen 135 ---------NPLS------------PYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG-NP-NNNSS--SFLPSLIR 189 (236)
T ss_dssp ---------CHSS------------HHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT-SS-SSSTS--SHHHHHHH
T ss_pred ---------cccc------------cccccccccccccccccccccccccccccccccccc-cc-ccccc--cccchhhH
Confidence 1111 233445667777776665569999999999999987 11 00000 01122233
Q ss_pred eeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEee
Q 042694 348 YYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIA 398 (554)
Q Consensus 348 ~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~ 398 (554)
.+..|.-..++++++..+++++|+|+|++++.++..... .+++||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~----~~~~yNig 236 (236)
T PF01370_consen 190 QALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKA----AGGIYNIG 236 (236)
T ss_dssp HHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCT----TTEEEEES
T ss_pred HhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCC----CCCEEEeC
Confidence 334455345568889999999999999999999987552 35899985
No 41
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.7e-23 Score=215.19 Aligned_cols=254 Identities=20% Similarity=0.215 Sum_probs=196.2
Q ss_pred cccchhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH--HHHHHHcCCchhhhccCcEEEEEccCCCC
Q 042694 100 DGIGIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF--KCLKQTYGKSYQAFMLSKLVPAVGNVCEN 177 (554)
Q Consensus 100 ~~~~i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~--~~l~~~~~~~~~~~~~~kv~~v~GDl~~~ 177 (554)
+...+..+++||+||||||||.+|+.|++++++.+| ++|++++...+ ..+..+....+ ...++.++-||+.+.
T Consensus 240 d~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~~el~~~~---~~~~~~~~igdVrD~ 314 (588)
T COG1086 240 DTELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLIDMELREKF---PELKLRFYIGDVRDR 314 (588)
T ss_pred CHHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHHHHHHHHHhhC---CCcceEEEecccccH
Confidence 345678889999999999999999999999999765 58888875432 22333322211 146899999999998
Q ss_pred CCCCCHHHHHHHhcC--ccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccccee
Q 042694 178 NLGLEEDLADVIAKE--VDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKV 252 (554)
Q Consensus 178 ~lGLs~~~~~~l~~~--vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i 252 (554)
+....+.++ +|+|||+||.-+. ..++.+++++||.||+|++++|.++ ++++||.+||.-+..+.
T Consensus 315 ------~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iSTDKAV~Pt---- 383 (588)
T COG1086 315 ------DRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLISTDKAVNPT---- 383 (588)
T ss_pred ------HHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEecCcccCCc----
Confidence 888888886 9999999998553 5689999999999999999999995 99999999996442221
Q ss_pred eccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhh-cC--CCcEEEEccceeeeccc
Q 042694 253 MEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLE-RG--DIPVVIIRPSVIESTCK 329 (554)
Q Consensus 253 ~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~-~~--glp~~I~Rp~~V~g~~~ 329 (554)
+ .++.+|.++|.+...+.+ .. +-.++++|.|+|.|+..
T Consensus 384 ---------------------------N------------vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG 424 (588)
T COG1086 384 ---------------------------N------------VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG 424 (588)
T ss_pred ---------------------------h------------HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC
Confidence 1 344556777777665543 22 48899999999999887
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHH
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQD 409 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e 409 (554)
+-+|-+.....-.+| + -..+|+..+-|+-+++.++.++.+..... .+.+|-+-.+ .|+++.|
T Consensus 425 SViPlFk~QI~~Ggp---------l--TvTdp~mtRyfMTI~EAv~LVlqA~a~~~-----gGeifvldMG--epvkI~d 486 (588)
T COG1086 425 SVIPLFKKQIAEGGP---------L--TVTDPDMTRFFMTIPEAVQLVLQAGAIAK-----GGEIFVLDMG--EPVKIID 486 (588)
T ss_pred CCHHHHHHHHHcCCC---------c--cccCCCceeEEEEHHHHHHHHHHHHhhcC-----CCcEEEEcCC--CCeEHHH
Confidence 766766544322222 2 12678889999999999999999876522 3689999887 7999999
Q ss_pred HHHHHHhHhccCCCCCC
Q 042694 410 LARLLHEHYSASPCVDT 426 (554)
Q Consensus 410 ~~~~~~~~~~~~p~~~~ 426 (554)
+++.+.+..|..|....
T Consensus 487 LAk~mi~l~g~~~~~dI 503 (588)
T COG1086 487 LAKAMIELAGQTPPGDI 503 (588)
T ss_pred HHHHHHHHhCCCCCCCC
Confidence 99999999998877653
No 42
>PLN02686 cinnamoyl-CoA reductase
Probab=99.91 E-value=1.1e-23 Score=218.11 Aligned_cols=264 Identities=16% Similarity=0.155 Sum_probs=168.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|+|||||||||||++|+++|++.|++| .+ +.++. ..+.++.............++.++.+|++++ +.+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V-~~-~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~------~~l 122 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSV-RI-AVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEP------ESL 122 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEE-EE-EeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCH------HHH
Confidence 568999999999999999999999988754 22 23322 1222211100000000013578899999998 888
Q ss_pred HHHhcCccEEEEcCCCCCchh---hHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeece--ecccc--c---ceeeccc
Q 042694 187 DVIAKEVDVIVNSAANTTFDE---RYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAY--VNGQR--R---GKVMEKP 256 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~~~---~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~--v~~~~--~---~~i~E~~ 256 (554)
..+++++|.|||+|+.++... ......++|+.||.+++++|++..++++|||+||.. +|+.. . ..++|..
T Consensus 123 ~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~ 202 (367)
T PLN02686 123 HEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEES 202 (367)
T ss_pred HHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCC
Confidence 888889999999999764432 124567889999999999999755799999999964 55531 0 0122211
Q ss_pred cCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCc-ccc
Q 042694 257 FCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPF-SGW 335 (554)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~-~g~ 335 (554)
.. ++... ..+. . .|..+|..+|.++..+....|++++++||+.|||+...+. +..
T Consensus 203 ~~------~~~~~------~~p~------~------~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~ 258 (367)
T PLN02686 203 WS------DESFC------RDNK------L------WYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTA 258 (367)
T ss_pred CC------Chhhc------cccc------c------hHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChh
Confidence 10 00000 0000 0 3455566777776655555689999999999999864211 111
Q ss_pred ccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHH
Q 042694 336 MEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLH 415 (554)
Q Consensus 336 ~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~ 415 (554)
+ + ....|..+ +.+ +...++++|||+|++++.++..... ...+.+| ++++ .++++.|+++.+.
T Consensus 259 ~---------~-~~~~g~~~-~~g--~g~~~~v~V~Dva~A~~~al~~~~~--~~~~~~y-i~~g--~~~s~~e~~~~i~ 320 (367)
T PLN02686 259 T---------I-AYLKGAQE-MLA--DGLLATADVERLAEAHVCVYEAMGN--KTAFGRY-ICFD--HVVSREDEAEELA 320 (367)
T ss_pred H---------H-HHhcCCCc-cCC--CCCcCeEEHHHHHHHHHHHHhccCC--CCCCCcE-EEeC--CCccHHHHHHHHH
Confidence 1 0 11122222 222 3345799999999999998864211 1124578 7776 6899999999999
Q ss_pred hHhccC
Q 042694 416 EHYSAS 421 (554)
Q Consensus 416 ~~~~~~ 421 (554)
+.+|.+
T Consensus 321 ~~~g~~ 326 (367)
T PLN02686 321 RQIGLP 326 (367)
T ss_pred HHcCCC
Confidence 999853
No 43
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.91 E-value=8.1e-24 Score=217.50 Aligned_cols=259 Identities=15% Similarity=0.070 Sum_probs=174.4
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh----HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL----FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~----~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
++++|||||||||||++|+++|++.|.+ |++++... .+.+...... ......++.++.+|+.+. +
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~------~ 73 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYE---VHGIIRRSSNFNTQRLDHIYID--PHPNKARMKLHYGDLSDA------S 73 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCE---EEEEecccccccccchhhhccc--cccccCceEEEEecCCCH------H
Confidence 5789999999999999999999998764 44443211 1111111000 000124688999999988 7
Q ss_pred HHHHHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCc-----eEEEEeeceecccccceeec
Q 042694 185 LADVIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLK-----LFVQVSTAYVNGQRRGKVME 254 (554)
Q Consensus 185 ~~~~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k-----~~v~vST~~v~~~~~~~i~E 254 (554)
.+..+++ ++|+|||+||..+.. .......++|+.||.+++++|++. +++ +|||+||..+|+....
T Consensus 74 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~Ss~~vyg~~~~---- 148 (340)
T PLN02653 74 SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAGSSEMYGSTPP---- 148 (340)
T ss_pred HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEeccHHHhCCCCC----
Confidence 7777666 579999999976532 345667789999999999999885 443 8999999999987432
Q ss_pred cccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccc
Q 042694 255 KPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSG 334 (554)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g 334 (554)
++.++.+. .+.. .|..+|..+|.+++.+....+++++..|+..+||+...+ .
T Consensus 149 -~~~E~~~~-------------~p~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~ 200 (340)
T PLN02653 149 -PQSETTPF-------------HPRS------------PYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGE--N 200 (340)
T ss_pred -CCCCCCCC-------------CCCC------------hhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCc--c
Confidence 22222111 1111 456667777777776666668888889998888864321 1
Q ss_pred cccCCCCccceeeeeccce-eeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHH
Q 042694 335 WMEGNRMMDPIILYYGKGQ-LTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARL 413 (554)
Q Consensus 335 ~~~~~~~~~~i~~~~~~G~-~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~ 413 (554)
++.. .....+..+..|. .+.+.++++...|+++|+|+|++++.++.... ..+||++++ +++++.|+++.
T Consensus 201 ~~~~--~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~------~~~yni~~g--~~~s~~e~~~~ 270 (340)
T PLN02653 201 FVTR--KITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQEK------PDDYVVATE--ESHTVEEFLEE 270 (340)
T ss_pred cchh--HHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcCC------CCcEEecCC--CceeHHHHHHH
Confidence 1100 0000000111222 22344778888999999999999998876421 358999998 79999999999
Q ss_pred HHhHhccC
Q 042694 414 LHEHYSAS 421 (554)
Q Consensus 414 ~~~~~~~~ 421 (554)
+.+..+..
T Consensus 271 i~~~~g~~ 278 (340)
T PLN02653 271 AFGYVGLN 278 (340)
T ss_pred HHHHcCCC
Confidence 99998863
No 44
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.91 E-value=7.5e-24 Score=214.38 Aligned_cols=240 Identities=10% Similarity=0.074 Sum_probs=161.9
Q ss_pred EEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc--
Q 042694 114 FVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK-- 191 (554)
Q Consensus 114 lITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~-- 191 (554)
||||||||||++|++.|++.+++| +++.. ...+|+.+. ++++.+++
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v---~~~~~-----------------------~~~~Dl~~~------~~l~~~~~~~ 48 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTN---LVLRT-----------------------HKELDLTRQ------ADVEAFFAKE 48 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcE---EEeec-----------------------cccCCCCCH------HHHHHHHhcc
Confidence 699999999999999999987654 22211 024798877 77777765
Q ss_pred CccEEEEcCCCCCc----hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccc-ceeeccccCCCCCcccc
Q 042694 192 EVDVIVNSAANTTF----DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRR-GKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 192 ~vdiViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~-~~i~E~~~~~~~~~~~~ 266 (554)
++|+||||||..+. .......++.|+.||.+++++|++. ++++|||+||.+||+... ..++|...... +
T Consensus 49 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~-~---- 122 (306)
T PLN02725 49 KPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKFAPQPIPETALLTG-P---- 122 (306)
T ss_pred CCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCCCCCCCCHHHhccC-C----
Confidence 68999999997542 2345678999999999999999984 789999999999998532 11222111000 0
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcccee
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
..+.. ..|..+|..+|.+++.+.+..+++++++||+.|||+.... .+- +......++
T Consensus 123 ---------~~p~~-----------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~-~~~--~~~~~~~~i 179 (306)
T PLN02725 123 ---------PEPTN-----------EWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNF-HPE--NSHVIPALI 179 (306)
T ss_pred ---------CCCCc-----------chHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCC-CCC--CCcccHHHH
Confidence 00000 0244456666766666655668999999999999986421 110 000111111
Q ss_pred e----eeccce-eeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 347 L----YYGKGQ-LTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 347 ~----~~~~G~-~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
. ....|. ....+++++...++++|+|++++++.++.... ..+.||++++ .++++.|+++.+.+.++..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~-----~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~ 252 (306)
T PLN02725 180 RRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS-----GAEHVNVGSG--DEVTIKELAELVKEVVGFE 252 (306)
T ss_pred HHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccc-----cCcceEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 1 011122 22224667778899999999999988876422 1357899988 7999999999999998753
No 45
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.91 E-value=2.5e-23 Score=211.36 Aligned_cols=249 Identities=16% Similarity=0.201 Sum_probs=163.1
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK 191 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~ 191 (554)
|||||||||||++|+++|++.++. .|+++++... ..+. . . ....+.+|+.++ +..+.+.+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~~~~--------~--~-~~~~~~~d~~~~------~~~~~~~~ 61 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT--DILVVDNLRDGHKFL--------N--L-ADLVIADYIDKE------DFLDRLEK 61 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc--eEEEEecCCCchhhh--------h--h-hheeeeccCcch------hHHHHHHh
Confidence 699999999999999999998752 3555543210 1110 0 0 113466787766 66666653
Q ss_pred ----CccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccc
Q 042694 192 ----EVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 192 ----~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~ 266 (554)
++|+|||+||.... ..+.....++|+.|+.+++++|.+. +. +|||+||.++|+...+.+.| .++.
T Consensus 62 ~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~~~~~~e-----~~~~--- 131 (314)
T TIGR02197 62 GAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDGEAGFRE-----GREL--- 131 (314)
T ss_pred hccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCCCCCccc-----ccCc---
Confidence 89999999997543 2356678899999999999999984 55 79999999999864321111 1110
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh--hcCCCcEEEEccceeeecccCCccccccCCCCccc
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL--ERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDP 344 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~--~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~ 344 (554)
..+.. .|..+|..+|.++.... +..+++++++||+.|||+...+-.+. .+ ....
T Consensus 132 ---------~~p~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~-~~--~~~~ 187 (314)
T TIGR02197 132 ---------ERPLN------------VYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKM-AS--VAFH 187 (314)
T ss_pred ---------CCCCC------------HHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCc-cc--HHHH
Confidence 00111 34445666776665422 23468999999999999865321111 00 0001
Q ss_pred eeeeeccce-eeee-----ecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHh
Q 042694 345 IILYYGKGQ-LTGF-----LVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHY 418 (554)
Q Consensus 345 i~~~~~~G~-~~~~-----~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~ 418 (554)
++.....|. +..+ .++++...+++||||++++++.++.. . ..++||++++ .++++.|+++.+.+.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~-----~~~~yni~~~--~~~s~~e~~~~i~~~~ 259 (314)
T TIGR02197 188 LFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-G-----VSGIFNLGTG--RARSFNDLADAVFKAL 259 (314)
T ss_pred HHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-c-----cCceEEcCCC--CCccHHHHHHHHHHHh
Confidence 111111121 1111 13566778999999999999988765 2 1369999998 7999999999999999
Q ss_pred ccCC
Q 042694 419 SASP 422 (554)
Q Consensus 419 ~~~p 422 (554)
|.++
T Consensus 260 g~~~ 263 (314)
T TIGR02197 260 GKDE 263 (314)
T ss_pred CCCC
Confidence 8654
No 46
>PLN02583 cinnamoyl-CoA reductase
Probab=99.90 E-value=8.1e-23 Score=205.89 Aligned_cols=261 Identities=13% Similarity=0.054 Sum_probs=165.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
+++|+|||||||+|++++++|+++|++| +.+ ++.......+..... . ....++..+.+|++++ +.+..
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V---~~~~R~~~~~~~~~~~~~l-~-~~~~~~~~~~~Dl~d~------~~~~~ 74 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGYTV---HAAVQKNGETEIEKEIRGL-S-CEEERLKVFDVDPLDY------HSILD 74 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEE---EEEEcCchhhhHHHHHHhc-c-cCCCceEEEEecCCCH------HHHHH
Confidence 5789999999999999999999988765 332 221111111100000 0 0124688899999988 77788
Q ss_pred HhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccc-cceeeccccCCCCCcccc
Q 042694 189 IAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQR-RGKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~-~~~i~E~~~~~~~~~~~~ 266 (554)
.+.++|.|+|+++.... ....+..+++|+.||.+++++|.+..+++++|++||..++... .....+.++++..+
T Consensus 75 ~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~---- 150 (297)
T PLN02583 75 ALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSW---- 150 (297)
T ss_pred HHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccC----
Confidence 88899999998765432 2235688999999999999999875468899999998664321 00001111221110
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcccee
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
.+... .. .....|..+|..+|+++..+.+..|++++++||+.|+|+...+.... +
T Consensus 151 ------------~~~~~--~~-~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~----------~ 205 (297)
T PLN02583 151 ------------SDQNF--CR-KFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPY----------L 205 (297)
T ss_pred ------------CCHHH--Hh-hcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhh----------h
Confidence 00000 00 00003555567777776555445689999999999999765321100 0
Q ss_pred eeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCCCC
Q 042694 347 LYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASPCV 424 (554)
Q Consensus 347 ~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p~~ 424 (554)
.+....+ ++....+|+|||||++++.++..... ...|+++++ +...+.++.+++.+.+...|..
T Consensus 206 ----~~~~~~~---~~~~~~~v~V~Dva~a~~~al~~~~~-----~~r~~~~~~--~~~~~~~~~~~~~~~~p~~~~~ 269 (297)
T PLN02583 206 ----KGAAQMY---ENGVLVTVDVNFLVDAHIRAFEDVSS-----YGRYLCFNH--IVNTEEDAVKLAQMLSPLIPSP 269 (297)
T ss_pred ----cCCcccC---cccCcceEEHHHHHHHHHHHhcCccc-----CCcEEEecC--CCccHHHHHHHHHHhCCCCCCC
Confidence 0111111 22346799999999999999875332 246999887 4445788999999988776553
No 47
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.90 E-value=6.6e-23 Score=210.56 Aligned_cols=264 Identities=16% Similarity=0.193 Sum_probs=170.2
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
|+|+|||||||||++|+++|++.+.+| +++++ .....+.. .. .....++..+.+|+.++ +.+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V---~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~Dl~d~------~~~~ 66 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDV---VILDNLCNSKRSVLPV-IE----RLGGKHPTFVEGDIRNE------ALLT 66 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeE---EEEecCCCchHhHHHH-HH----HhcCCCceEEEccCCCH------HHHH
Confidence 479999999999999999999987654 33321 11111111 00 00123567789999987 7777
Q ss_pred HHhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCC
Q 042694 188 VIAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDS 262 (554)
Q Consensus 188 ~l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~ 262 (554)
.+++ ++|+|||+|+..... ....+.+++|+.++.+++++|++. ++++||++||+++|+... +.++++..+
T Consensus 67 ~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg~~~----~~~~~E~~~ 141 (338)
T PRK10675 67 EILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYGDQP----KIPYVESFP 141 (338)
T ss_pred HHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhCCCC----CCccccccC
Confidence 6665 699999999876532 345678899999999999999984 789999999999987532 112222211
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc-CCCcEEEEccceeeecccCCccccccCC--
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER-GDIPVVIIRPSVIESTCKEPFSGWMEGN-- 339 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~-~glp~~I~Rp~~V~g~~~~p~~g~~~~~-- 339 (554)
.. .+.. .|..+|..+|.+++.+.+. .+++++|+|++.+||+....+-|--+..
T Consensus 142 ~~------------~p~~------------~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~ 197 (338)
T PRK10675 142 TG------------TPQS------------PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIP 197 (338)
T ss_pred CC------------CCCC------------hhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCCh
Confidence 00 0011 3555667777777665433 4799999999999996432111100000
Q ss_pred CCccceeeeeccc---eeeee----e-cCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHH
Q 042694 340 RMMDPIILYYGKG---QLTGF----L-VDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLA 411 (554)
Q Consensus 340 ~~~~~i~~~~~~G---~~~~~----~-~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~ 411 (554)
....+.+..+..+ .+..+ + .++...+++++|+|+|++++.++..... ...+++||++++ +++++.|++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~--~~~~~~~ni~~~--~~~s~~e~~ 273 (338)
T PRK10675 198 NNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLAN--KPGVHIYNLGAG--VGSSVLDVV 273 (338)
T ss_pred hHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhc--cCCCceEEecCC--CceeHHHHH
Confidence 0000111111111 11111 1 2456778999999999999988764211 122479999988 799999999
Q ss_pred HHHHhHhccC
Q 042694 412 RLLHEHYSAS 421 (554)
Q Consensus 412 ~~~~~~~~~~ 421 (554)
+.+.+.+++.
T Consensus 274 ~~i~~~~g~~ 283 (338)
T PRK10675 274 NAFSKACGKP 283 (338)
T ss_pred HHHHHHhCCC
Confidence 9999999864
No 48
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.90 E-value=5.5e-23 Score=206.18 Aligned_cols=226 Identities=19% Similarity=0.253 Sum_probs=155.5
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK 191 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~ 191 (554)
+|||||||||+|++++++|++.+++| +++.+. .+|+.++ +.+..+++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v---~~~~r~------------------------~~d~~~~------~~~~~~~~ 47 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVV---VALTSS------------------------QLDLTDP------EALERLLR 47 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEE---EEeCCc------------------------ccCCCCH------HHHHHHHH
Confidence 48999999999999999999988654 443321 4688776 77777776
Q ss_pred C--ccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccc
Q 042694 192 E--VDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 192 ~--vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~ 266 (554)
+ +|+|||+|+..... ......+++|+.|+.+++++|++. +. +|||+||.++|+... +.++++.++.
T Consensus 48 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~~~----~~~~~E~~~~--- 118 (287)
T TIGR01214 48 AIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDGEG----KRPYREDDAT--- 118 (287)
T ss_pred hCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecCCC----CCCCCCCCCC---
Confidence 5 59999999976543 245678899999999999999885 43 899999999997632 2233332211
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcccee
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
.+. . .|..+|..+|.++. ..+++++|+||++|||+.... .++ ..++
T Consensus 119 ----------~~~------~------~Y~~~K~~~E~~~~----~~~~~~~ilR~~~v~G~~~~~--~~~------~~~~ 164 (287)
T TIGR01214 119 ----------NPL------N------VYGQSKLAGEQAIR----AAGPNALIVRTSWLYGGGGGR--NFV------RTML 164 (287)
T ss_pred ----------CCc------c------hhhHHHHHHHHHHH----HhCCCeEEEEeeecccCCCCC--CHH------HHHH
Confidence 000 0 23333444444443 347899999999999976410 111 1111
Q ss_pred eeecc-ceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 347 LYYGK-GQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 347 ~~~~~-G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
..+.. +.+.. .++...+++++||+|+++..++..... .+++||++++ +++++.|+++.+.+.++..+
T Consensus 165 ~~~~~~~~~~~---~~~~~~~~v~v~Dva~a~~~~~~~~~~----~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~~ 232 (287)
T TIGR01214 165 RLAGRGEELRV---VDDQIGSPTYAKDLARVIAALLQRLAR----ARGVYHLANS--GQCSWYEFAQAIFEEAGADG 232 (287)
T ss_pred HHhhcCCCceE---ecCCCcCCcCHHHHHHHHHHHHhhccC----CCCeEEEECC--CCcCHHHHHHHHHHHhCccc
Confidence 11111 22221 123567899999999999998865321 2479999998 79999999999999998753
No 49
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.90 E-value=4.7e-24 Score=207.19 Aligned_cols=241 Identities=19% Similarity=0.250 Sum_probs=163.7
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhh-hccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQA-FMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~-~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
||||||+|++|+.|+++|++.+| ++|++++... .-.++.+.....+. .....+.++.||+.+. +.+..+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~------~~l~~~ 72 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDK------ERLNRI 72 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHH------HHHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCH------HHHHHH
Confidence 79999999999999999998766 5899887542 22333332110010 1122456789999998 888999
Q ss_pred hc--CccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 190 AK--EVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 190 ~~--~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
++ ++|+|||+||.-+. ..++.++.++||.||++++++|.++ ++++||++||.-+..+.
T Consensus 73 ~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~Pt---------------- 135 (293)
T PF02719_consen 73 FEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVNPT---------------- 135 (293)
T ss_dssp TT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS------------------
T ss_pred HhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCCCC----------------
Confidence 88 99999999998664 4578899999999999999999995 89999999997543221
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc---CCCcEEEEccceeeecccCCccccccCCCC
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER---GDIPVVIIRPSVIESTCKEPFSGWMEGNRM 341 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~---~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~ 341 (554)
+ .++.+|.++|.+...+... .+..++++|.|+|.|+..+-+|.|......
T Consensus 136 ---------------n------------vmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~ 188 (293)
T PF02719_consen 136 ---------------N------------VMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKN 188 (293)
T ss_dssp ---------------S------------HHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHT
T ss_pred ---------------c------------HHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHc
Confidence 1 2233456777776655433 368999999999999888888888766443
Q ss_pred ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 342 MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 342 ~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
.+|+. ..+++..+-++-++++++.++.++.... .+.+|-.-.+ +|+++.|+++.+.+..|..
T Consensus 189 g~PlT-----------vT~p~mtRffmti~EAv~Lvl~a~~~~~-----~geifvl~mg--~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 189 GGPLT-----------VTDPDMTRFFMTIEEAVQLVLQAAALAK-----GGEIFVLDMG--EPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp TSSEE-----------ECETT-EEEEE-HHHHHHHHHHHHHH-------TTEEEEE-----TCEECCCHHHHHHHHTT-E
T ss_pred CCcce-----------eCCCCcEEEEecHHHHHHHHHHHHhhCC-----CCcEEEecCC--CCcCHHHHHHHHHhhcccc
Confidence 34432 1567888889999999999999876532 2579998887 7999999999999999865
Q ss_pred CC
Q 042694 422 PC 423 (554)
Q Consensus 422 p~ 423 (554)
|.
T Consensus 251 ~~ 252 (293)
T PF02719_consen 251 PG 252 (293)
T ss_dssp EE
T ss_pred cc
Confidence 53
No 50
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.90 E-value=1.2e-22 Score=206.72 Aligned_cols=224 Identities=15% Similarity=0.143 Sum_probs=154.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||||||||+|++|+++|++.+++ |.++.+.. .+... . ...+++++.||+.++ +.+...+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~---V~~l~R~~-~~~~~-l-------~~~~v~~v~~Dl~d~------~~l~~al 62 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQ---VRCLVRNL-RKASF-L-------KEWGAELVYGDLSLP------ETLPPSF 62 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCe---EEEEEcCh-HHhhh-H-------hhcCCEEEECCCCCH------HHHHHHH
Confidence 47999999999999999999998874 44443321 11110 0 113678999999988 8888888
Q ss_pred cCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccccc
Q 042694 191 KEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVS 270 (554)
Q Consensus 191 ~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~ 270 (554)
+++|+|||+++.. ........++|+.|+.+++++|++. ++++|||+||..+.....
T Consensus 63 ~g~d~Vi~~~~~~--~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~~~~--------------------- 118 (317)
T CHL00194 63 KGVTAIIDASTSR--PSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQYPY--------------------- 118 (317)
T ss_pred CCCCEEEECCCCC--CCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccccccccCC---------------------
Confidence 9999999987642 2234457889999999999999994 899999999964321100
Q ss_pred cccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeec
Q 042694 271 NSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYG 350 (554)
Q Consensus 271 ~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~ 350 (554)
. .+..+|..+ |......+++++|+||+.+++..- ..+. .+++ .
T Consensus 119 ------~---------------~~~~~K~~~----e~~l~~~~l~~tilRp~~~~~~~~---~~~~------~~~~---~ 161 (317)
T CHL00194 119 ------I---------------PLMKLKSDI----EQKLKKSGIPYTIFRLAGFFQGLI---SQYA------IPIL---E 161 (317)
T ss_pred ------C---------------hHHHHHHHH----HHHHHHcCCCeEEEeecHHhhhhh---hhhh------hhhc---c
Confidence 0 011112233 333345689999999998875311 1110 0111 0
Q ss_pred cceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 351 KGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 351 ~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
+. +.+..+++...++|+++|+|+++..++..+.. .+++||++++ +++|++|+++.+.+..|+.
T Consensus 162 -~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~----~~~~~ni~g~--~~~s~~el~~~~~~~~g~~ 224 (317)
T CHL00194 162 -KQ-PIWITNESTPISYIDTQDAAKFCLKSLSLPET----KNKTFPLVGP--KSWNSSEIISLCEQLSGQK 224 (317)
T ss_pred -CC-ceEecCCCCccCccCHHHHHHHHHHHhcCccc----cCcEEEecCC--CccCHHHHHHHHHHHhCCC
Confidence 11 12223455668999999999999888754322 3589999998 7899999999999999875
No 51
>PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms. The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process
Probab=99.90 E-value=3.6e-24 Score=176.30 Aligned_cols=94 Identities=34% Similarity=0.474 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHhcccccccccCcchHHHHHHHHHHHHHHHHHHHhccccccceEEEechhHHHHHHhcChhhccccccCC
Q 042694 446 SAHLWRDAIQRSGLTSTANLNGKLPQKLETICRKSVEQAKHLADIYEPYTFYGGRFDNSNTERLMEKMSEEEKRKFGFDV 525 (554)
Q Consensus 446 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~l~~~D~~~F~~d~ 525 (554)
+.|.+|+++++..+... .++|.+.++++|+.+ ++++++||++++|+|+|+|+++|++.|+++||++|+||+
T Consensus 1 ~~h~lPA~~~D~~~~l~--g~kp~~~k~~~ki~~-------~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~ 71 (94)
T PF03015_consen 1 LFHFLPAYLLDLILRLF--GQKPRMVKIYRKIRK-------ALEVLEYFTTNEWIFDNDNTRRLWERLSPEDREIFNFDI 71 (94)
T ss_pred CcchHHHHHHHHHHHHh--CCChHHHHHHHHHHH-------HHHHHHHHHhCceeecchHHHHHHHhCchhcCceecCCC
Confidence 35889999988644321 244556678877654 568999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhhchhHHHHHhhcC
Q 042694 526 GSIDWKEYITNVHIPGLRRHVMKG 549 (554)
Q Consensus 526 ~~idW~~Y~~~~~~~G~r~y~lke 549 (554)
++|||++|+.+ |++|+|||++||
T Consensus 72 ~~idW~~Y~~~-~~~G~rkyllke 94 (94)
T PF03015_consen 72 RSIDWEEYFRN-YIPGIRKYLLKE 94 (94)
T ss_pred CCCCHHHHHHH-HHHHHHHHHhCC
Confidence 99999999999 899999999998
No 52
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.89 E-value=1.6e-22 Score=206.59 Aligned_cols=250 Identities=16% Similarity=0.167 Sum_probs=169.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
++|+|||||||||++|++.|++.++ +|+++++... ... .....++..+.+|+.++ ++++.+.
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~---~V~~~~r~~~-~~~--------~~~~~~~~~~~~D~~~~------~~l~~~~ 62 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE---EVRVLVRPTS-DRR--------NLEGLDVEIVEGDLRDP------ASLRKAV 62 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC---EEEEEEecCc-ccc--------ccccCCceEEEeeCCCH------HHHHHHH
Confidence 4799999999999999999999876 4555543210 000 00123678899999988 7888888
Q ss_pred cCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccccc
Q 042694 191 KEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFV 269 (554)
Q Consensus 191 ~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~ 269 (554)
+++|+|||+|+.... .+.+...++.|+.|+.+++++|.+ .++++||++||.++++... .+.++++..+..+.
T Consensus 63 ~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS~~~~~~~~---~~~~~~e~~~~~~~--- 135 (328)
T TIGR03466 63 AGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALE-AGVERVVYTSSVATLGVRG---DGTPADETTPSSLD--- 135 (328)
T ss_pred hCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEechhhcCcCC---CCCCcCccCCCCcc---
Confidence 999999999986543 345778899999999999999998 4789999999999988521 11122222111000
Q ss_pred ccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeee
Q 042694 270 SNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYY 349 (554)
Q Consensus 270 ~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~ 349 (554)
.... .|..+|..+|++++.+....+++++++||+.+||+....... ...++...
T Consensus 136 -------~~~~------------~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~-------~~~~~~~~ 189 (328)
T TIGR03466 136 -------DMIG------------HYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTP-------TGRIIVDF 189 (328)
T ss_pred -------cccC------------hHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCc-------HHHHHHHH
Confidence 0000 344556677777776665568999999999999976421100 01111111
Q ss_pred ccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 350 GKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 350 ~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
..+..+.. .+...++++++|+|++++.++.... .+..|+++ + .++++.|+++.+.+.+|+..
T Consensus 190 ~~~~~~~~---~~~~~~~i~v~D~a~a~~~~~~~~~-----~~~~~~~~-~--~~~s~~e~~~~i~~~~g~~~ 251 (328)
T TIGR03466 190 LNGKMPAY---VDTGLNLVHVDDVAEGHLLALERGR-----IGERYILG-G--ENLTLKQILDKLAEITGRPA 251 (328)
T ss_pred HcCCCcee---eCCCcceEEHHHHHHHHHHHHhCCC-----CCceEEec-C--CCcCHHHHHHHHHHHhCCCC
Confidence 11122222 2234689999999999988875522 24688885 4 58999999999999998753
No 53
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.89 E-value=1e-21 Score=188.98 Aligned_cols=263 Identities=16% Similarity=0.163 Sum_probs=190.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc------hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA------ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~------~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+++||||||.||+|+|.+-+|++.+++| .++|+ +...|+++..++ .++|.++.+|+++.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v---~~vDNl~n~~~~sl~r~~~l~~~------~~~v~f~~~Dl~D~------ 66 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGV---VIVDNLNNSYLESLKRVRQLLGE------GKSVFFVEGDLNDA------ 66 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcE---EEEecccccchhHHHHHHHhcCC------CCceEEEEeccCCH------
Confidence 5789999999999999999999999864 44442 334555554432 47999999999998
Q ss_pred HHHHHHhc--CccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccC
Q 042694 184 DLADVIAK--EVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFC 258 (554)
Q Consensus 184 ~~~~~l~~--~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~ 258 (554)
+.++++++ +.|.|+|.||.-.- .+.+...+..|+.||.++|+.+++. +++.+|+.||+.|||... +-|++
T Consensus 67 ~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvYG~p~----~ip~t 141 (343)
T KOG1371|consen 67 EALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVYGLPT----KVPIT 141 (343)
T ss_pred HHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeeecCcc----eeecc
Confidence 89999987 79999999997554 2345678999999999999999996 699999999999999853 34555
Q ss_pred CCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec--cc---CCcc
Q 042694 259 MGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST--CK---EPFS 333 (554)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~--~~---~p~~ 333 (554)
+..+.. .+.+ .|+.+|...|.++.......++.++++|...++|. +. ++..
T Consensus 142 e~~~t~------------~p~~------------pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~ 197 (343)
T KOG1371|consen 142 EEDPTD------------QPTN------------PYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPL 197 (343)
T ss_pred CcCCCC------------CCCC------------cchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCc
Confidence 443321 0111 56666777777777666666799999999999983 22 2223
Q ss_pred ccccCCCCccceeeeeccceee--------eeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcc
Q 042694 334 GWMEGNRMMDPIILYYGKGQLT--------GFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPL 405 (554)
Q Consensus 334 g~~~~~~~~~~i~~~~~~G~~~--------~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~i 405 (554)
+..+++.. -+.....|..+ .-..|++...|.++|-|.|..++.++...... .+.++||++++ .+.
T Consensus 198 ~~~nnl~p---~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~--~~~~i~Nlgtg--~g~ 270 (343)
T KOG1371|consen 198 GIPNNLLP---YVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGA--AEFGVYNLGTG--KGS 270 (343)
T ss_pred cCcccccc---cccchhhcccccceeecCcccccCCCeeecceeeEehHHHHHHHhhccccc--hheeeEeecCC--CCc
Confidence 33333221 11111111111 11235688899999999999999988765431 23569999999 788
Q ss_pred cHHHHHHHHHhHhccCCC
Q 042694 406 VFQDLARLLHEHYSASPC 423 (554)
Q Consensus 406 t~~e~~~~~~~~~~~~p~ 423 (554)
+..++...+.+..|..-+
T Consensus 271 ~V~~lv~a~~k~~g~~~k 288 (343)
T KOG1371|consen 271 SVLELVTAFEKALGVKIK 288 (343)
T ss_pred cHHHHHHHHHHHhcCCCC
Confidence 999999999999987644
No 54
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.89 E-value=4.5e-23 Score=193.27 Aligned_cols=255 Identities=18% Similarity=0.178 Sum_probs=176.0
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
.+++|+||||.||+|+||+++|+..++ .|+.+|.. +...+++... + ......+.+.-|+..+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh---~VIa~Dn~-ftg~k~n~~~-~--~~~~~fel~~hdv~~p----------- 87 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGH---EVIALDNY-FTGRKENLEH-W--IGHPNFELIRHDVVEP----------- 87 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCC---eEEEEecc-cccchhhcch-h--ccCcceeEEEeechhH-----------
Confidence 358999999999999999999998885 56666643 1111222111 1 1223455555565554
Q ss_pred HhcCccEEEEcCCCC---CchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 189 IAKEVDVIVNSAANT---TFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 189 l~~~vdiViH~AA~v---~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
+..+||-|||+||.. ++..++-..+..|+.||.+++.+|++. + ++|+|.||+.|||+.. +.+.++...
T Consensus 88 l~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTseVYgdp~----~hpq~e~yw--- 158 (350)
T KOG1429|consen 88 LLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTSEVYGDPL----VHPQVETYW--- 158 (350)
T ss_pred HHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecccccCCcc----cCCCccccc---
Confidence 778999999999975 456677788999999999999999985 3 8999999999999842 222111110
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccce
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPI 345 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i 345 (554)
...... ..+.-|...|.++|.|+-......|+.+.|.|+-++|||.. .|.+. +....+
T Consensus 159 -----------g~vnpi------gpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm----~~~dg-rvvsnf 216 (350)
T KOG1429|consen 159 -----------GNVNPI------GPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM----HMDDG-RVVSNF 216 (350)
T ss_pred -----------cccCcC------CchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc----ccCCC-hhhHHH
Confidence 000000 00013445567777777766667899999999999999765 33331 111111
Q ss_pred eeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhcc
Q 042694 346 ILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSA 420 (554)
Q Consensus 346 ~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~ 420 (554)
+...-.+.--++.+++...+.|.+|+|+++++++++..... .-+|++++ +.+|+.|+++++.+..+.
T Consensus 217 ~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~------~pvNiGnp--~e~Tm~elAemv~~~~~~ 283 (350)
T KOG1429|consen 217 IAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR------GPVNIGNP--GEFTMLELAEMVKELIGP 283 (350)
T ss_pred HHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc------CCcccCCc--cceeHHHHHHHHHHHcCC
Confidence 11112233345678999999999999999999999876543 34999999 789999999999998853
No 55
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.89 E-value=3.9e-22 Score=203.31 Aligned_cols=233 Identities=17% Similarity=0.180 Sum_probs=161.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|||||||||||++|+++|++.+.. .+|+++++.. ...+.... ...++.++.+|++++ +.
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~-~~V~~~~r~~~~~~~~~~~~-------~~~~~~~v~~Dl~d~------~~ 67 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNP-KKIIIYSRDELKQWEMQQKF-------PAPCLRFFIGDVRDK------ER 67 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCC-cEEEEEcCChhHHHHHHHHh-------CCCcEEEEEccCCCH------HH
Confidence 46789999999999999999999987622 2566665321 11222111 124688999999988 88
Q ss_pred HHHHhcCccEEEEcCCCCCc---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCC
Q 042694 186 ADVIAKEVDVIVNSAANTTF---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDS 262 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~ 262 (554)
+..+.+++|+|||+||.... ..++...+++|+.|+.+++++|.+. ++++||++||.....
T Consensus 68 l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~~---------------- 130 (324)
T TIGR03589 68 LTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAAN---------------- 130 (324)
T ss_pred HHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCCC----------------
Confidence 88888899999999997532 2345678999999999999999984 788999999952210
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeecccCCccccccCC
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIESTCKEPFSGWMEGN 339 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~ 339 (554)
+.. .|..+|..+|.++..+. ...|++++++||+.|+|+....++-+..
T Consensus 131 ---------------p~~------------~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~-- 181 (324)
T TIGR03589 131 ---------------PIN------------LYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKS-- 181 (324)
T ss_pred ---------------CCC------------HHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHH--
Confidence 001 23334556666654322 3468999999999999965321221111
Q ss_pred CCccceeeeeccce--eeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhH
Q 042694 340 RMMDPIILYYGKGQ--LTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEH 417 (554)
Q Consensus 340 ~~~~~i~~~~~~G~--~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~ 417 (554)
....|. ++. .+++...++++|||+|++++.++.... .+.+|+ +++ ..+++.|+++.+.+.
T Consensus 182 --------~~~~~~~~~~i--~~~~~~r~~i~v~D~a~a~~~al~~~~-----~~~~~~-~~~--~~~sv~el~~~i~~~ 243 (324)
T TIGR03589 182 --------LKEEGVTELPI--TDPRMTRFWITLEQGVNFVLKSLERML-----GGEIFV-PKI--PSMKITDLAEAMAPE 243 (324)
T ss_pred --------HHHhCCCCeee--CCCCceEeeEEHHHHHHHHHHHHhhCC-----CCCEEc-cCC--CcEEHHHHHHHHHhh
Confidence 111222 221 356677899999999999999876521 236885 444 468999999999886
Q ss_pred h
Q 042694 418 Y 418 (554)
Q Consensus 418 ~ 418 (554)
.
T Consensus 244 ~ 244 (324)
T TIGR03589 244 C 244 (324)
T ss_pred C
Confidence 4
No 56
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.88 E-value=1.6e-21 Score=199.01 Aligned_cols=260 Identities=15% Similarity=0.195 Sum_probs=170.6
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
+|||||||||+|++++++|++.+++ |++++.. ..+.+.... ...++..+.+|+.++ +.+..
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~---V~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~------~~~~~ 64 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHE---VVVLDNLSNGSPEALKRGE-------RITRVTFVEGDLRDR------ELLDR 64 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCe---EEEEeCCCccchhhhhhhc-------cccceEEEECCCCCH------HHHHH
Confidence 5899999999999999999998765 4444321 111111100 012577889999988 77777
Q ss_pred Hhc--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCc
Q 042694 189 IAK--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSI 263 (554)
Q Consensus 189 l~~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~ 263 (554)
+++ ++|+|||+|+..... ....+.+..|+.++.+++++|.+. ++++||++||.++++.... .++++.++.
T Consensus 65 ~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~~~~----~~~~e~~~~ 139 (328)
T TIGR01179 65 LFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGEPSS----IPISEDSPL 139 (328)
T ss_pred HHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCCCCC----CCccccCCC
Confidence 665 799999999976442 245577889999999999999884 7889999999998875321 112221110
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc-CCCcEEEEccceeeecccCCccccccCCC-C
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER-GDIPVVIIRPSVIESTCKEPFSGWMEGNR-M 341 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~-~glp~~I~Rp~~V~g~~~~p~~g~~~~~~-~ 341 (554)
.+.. .|..+|..+|.+....... .+++++|+||+.|||+...+..++..... .
T Consensus 140 -------------~~~~------------~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~ 194 (328)
T TIGR01179 140 -------------GPIN------------PYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITH 194 (328)
T ss_pred -------------CCCC------------chHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccch
Confidence 0001 3455566666666554433 68999999999999986544333321100 0
Q ss_pred ccceeeeec--c-ceeee----ee-cCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHH
Q 042694 342 MDPIILYYG--K-GQLTG----FL-VDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARL 413 (554)
Q Consensus 342 ~~~i~~~~~--~-G~~~~----~~-~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~ 413 (554)
..+.+.... . +.+.. ++ .+++...++||++|+++++..++..... ...+++||++++ .+++++|+++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~--~~~~~~~n~~~~--~~~s~~ei~~~ 270 (328)
T TIGR01179 195 LIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLN--GGESHVYNLGYG--QGFSVLEVIEA 270 (328)
T ss_pred HHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhc--CCCcceEEcCCC--CcccHHHHHHH
Confidence 000000000 1 11111 11 2456678999999999999988765321 123579999998 78999999999
Q ss_pred HHhHhccC
Q 042694 414 LHEHYSAS 421 (554)
Q Consensus 414 ~~~~~~~~ 421 (554)
+.+.+|+.
T Consensus 271 ~~~~~g~~ 278 (328)
T TIGR01179 271 FKKVSGVD 278 (328)
T ss_pred HHHHhCCC
Confidence 99999864
No 57
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.88 E-value=1.7e-22 Score=201.81 Aligned_cols=229 Identities=17% Similarity=0.254 Sum_probs=144.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||||||||||++|.+.|.+++. .++..... ..|+.+. +....+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~---~v~~~~r~------------------------~~dl~d~------~~~~~~~ 47 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY---EVIATSRS------------------------DLDLTDP------EAVAKLL 47 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE---EEEEESTT------------------------CS-TTSH------HHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC---EEEEeCch------------------------hcCCCCH------HHHHHHH
Confidence 6899999999999999999987654 33333221 4577665 6666665
Q ss_pred c--CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 191 K--EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 191 ~--~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
+ ++|+||||||..+.+ .+++.++++|+.++.+|+++|.+. + .++||+||.+|+.... ..+|.|.+...
T Consensus 48 ~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VFdG~~----~~~y~E~d~~~- 120 (286)
T PF04321_consen 48 EAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVFDGDK----GGPYTEDDPPN- 120 (286)
T ss_dssp HHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-SST----SSSB-TTS----
T ss_pred HHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEEcCCc----ccccccCCCCC-
Confidence 5 699999999987753 478899999999999999999984 4 4899999999997652 33455444321
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccce
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPI 345 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i 345 (554)
+.+. |+.+| ..+|..+.+..-...|+|+|.+||.....+..|+..
T Consensus 121 ------------P~~~------------YG~~K----~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~------- 165 (286)
T PF04321_consen 121 ------------PLNV------------YGRSK----LEGEQAVRAACPNALILRTSWVYGPSGRNFLRWLLR------- 165 (286)
T ss_dssp -------------SSH------------HHHHH----HHHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHHHH-------
T ss_pred ------------CCCH------------HHHHH----HHHHHHHHHhcCCEEEEecceecccCCCchhhhHHH-------
Confidence 1222 22223 344444332234899999999999855434344321
Q ss_pred eeeeccc-eeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 346 ILYYGKG-QLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 346 ~~~~~~G-~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
....| .+. ...+.....++++|+|++++.++..... +....++||++++ +.+|+.|+.+.+.+.++..+
T Consensus 166 --~~~~~~~i~---~~~d~~~~p~~~~dlA~~i~~l~~~~~~-~~~~~Giyh~~~~--~~~S~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 166 --RLRQGEPIK---LFDDQYRSPTYVDDLARVILELIEKNLS-GASPWGIYHLSGP--ERVSRYEFAEAIAKILGLDP 235 (286)
T ss_dssp --HHHCTSEEE---EESSCEE--EEHHHHHHHHHHHHHHHHH--GGG-EEEE---B--S-EEHHHHHHHHHHHHTHCT
T ss_pred --HHhcCCeeE---eeCCceeCCEEHHHHHHHHHHHHHhccc-ccccceeEEEecC--cccCHHHHHHHHHHHhCCCC
Confidence 11222 222 2246678899999999999999877543 1122479999999 78999999999999999876
No 58
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.87 E-value=1.3e-21 Score=203.82 Aligned_cols=238 Identities=18% Similarity=0.175 Sum_probs=156.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++|+|||||||+|++++++|++++++ |+++.+... ................+++++.||++++ +.+.
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~---V~~l~R~~~-~~~~~~~~~~~~~~~~~v~~v~~Dl~d~------~~l~ 127 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYN---VVAVAREKS-GIRGKNGKEDTKKELPGAEVVFGDVTDA------DSLR 127 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEEechh-hccccchhhHHhhhcCCceEEEeeCCCH------HHHH
Confidence 45789999999999999999999998865 444433211 1000000000000124688999999998 7787
Q ss_pred HHhc----CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCc
Q 042694 188 VIAK----EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSI 263 (554)
Q Consensus 188 ~l~~----~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~ 263 (554)
.+++ ++|+||||+|.... .....+++|+.++.+++++|++. ++++||++||.+++....
T Consensus 128 ~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v~~p~~-------------- 190 (390)
T PLN02657 128 KVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICVQKPLL-------------- 190 (390)
T ss_pred HHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccccCcch--------------
Confidence 7776 59999999885321 12345678999999999999984 889999999987643210
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
.|...|...|..+.. ...+++++|+||+.+|++. .+.+..
T Consensus 191 -----------------------------~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~----~~~~~~----- 230 (390)
T PLN02657 191 -----------------------------EFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL----GGQVEI----- 230 (390)
T ss_pred -----------------------------HHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc----HHHHHh-----
Confidence 001112222322221 2368999999999998742 122111
Q ss_pred ceeeeeccceeeeeecCCCcc-cccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 344 PIILYYGKGQLTGFLVDPNGI-LDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~-~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
...|....+.++++.. .++|+++|+|.+++.++..+.. .+++||++++. +.+|++|+++.+.+.+|++|
T Consensus 231 -----~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~----~~~~~~Iggp~-~~~S~~Eia~~l~~~lG~~~ 300 (390)
T PLN02657 231 -----VKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESK----INKVLPIGGPG-KALTPLEQGEMLFRILGKEP 300 (390)
T ss_pred -----hccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccc----cCCEEEcCCCC-cccCHHHHHHHHHHHhCCCC
Confidence 1122222233555543 3679999999999888764322 24899998752 47899999999999999754
No 59
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.87 E-value=4.1e-21 Score=185.60 Aligned_cols=223 Identities=19% Similarity=0.245 Sum_probs=162.0
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK 191 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~ 191 (554)
+|||||++|.||..|.+.|. .+. .|+.++.. ..|++++ +...++++
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~---~v~a~~~~------------------------~~Ditd~------~~v~~~i~ 47 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEF---EVIATDRA------------------------ELDITDP------DAVLEVIR 47 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCc---eEEeccCc------------------------cccccCh------HHHHHHHH
Confidence 49999999999999999997 233 33333221 1588888 66666665
Q ss_pred --CccEEEEcCCCCCch---hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccc
Q 042694 192 --EVDVIVNSAANTTFD---ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 192 --~vdiViH~AA~v~~~---~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~ 266 (554)
++|+|||+||.+..+ ..++.++.+|..|+.++.++|++. + -++||+||.||+.... ..+|.|++...|
T Consensus 48 ~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-g-a~lVhiSTDyVFDG~~----~~~Y~E~D~~~P- 120 (281)
T COG1091 48 ETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-G-ARLVHISTDYVFDGEK----GGPYKETDTPNP- 120 (281)
T ss_pred hhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-C-CeEEEeecceEecCCC----CCCCCCCCCCCC-
Confidence 689999999998764 367899999999999999999985 3 3899999999998754 345666554322
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcccee
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
.+ .|+.+|+..|..+. ..+-...|+|.++|||.....|..++-.
T Consensus 121 ------------~n------------vYG~sKl~GE~~v~----~~~~~~~I~Rtswv~g~~g~nFv~tml~-------- 164 (281)
T COG1091 121 ------------LN------------VYGRSKLAGEEAVR----AAGPRHLILRTSWVYGEYGNNFVKTMLR-------- 164 (281)
T ss_pred ------------hh------------hhhHHHHHHHHHHH----HhCCCEEEEEeeeeecCCCCCHHHHHHH--------
Confidence 22 35555566655554 3456799999999999766444433321
Q ss_pred eeeccc-eeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCC
Q 042694 347 LYYGKG-QLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASP 422 (554)
Q Consensus 347 ~~~~~G-~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p 422 (554)
....| .+. .-.+.....+++.|+|.+|..++..... .++||++++ ..+||-|+.+.+.+.++...
T Consensus 165 -la~~~~~l~---vv~Dq~gsPt~~~dlA~~i~~ll~~~~~-----~~~yH~~~~--g~~Swydfa~~I~~~~~~~~ 230 (281)
T COG1091 165 -LAKEGKELK---VVDDQYGSPTYTEDLADAILELLEKEKE-----GGVYHLVNS--GECSWYEFAKAIFEEAGVDG 230 (281)
T ss_pred -HhhcCCceE---EECCeeeCCccHHHHHHHHHHHHhcccc-----CcEEEEeCC--CcccHHHHHHHHHHHhCCCc
Confidence 11222 333 2356677889999999999998765432 349999998 57899999999999988544
No 60
>PLN02778 3,5-epimerase/4-reductase
Probab=99.86 E-value=3.9e-21 Score=193.39 Aligned_cols=221 Identities=12% Similarity=0.118 Sum_probs=138.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
.|+|||||||||||++|++.|++++++| +. ..+|+.+. +.+...
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V---~~---------------------------~~~~~~~~------~~v~~~ 52 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDF---HY---------------------------GSGRLENR------ASLEAD 52 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEE---EE---------------------------ecCccCCH------HHHHHH
Confidence 4789999999999999999999988754 11 12333332 223222
Q ss_pred hc--CccEEEEcCCCCC------chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccc-ee-eccccCC
Q 042694 190 AK--EVDVIVNSAANTT------FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRG-KV-MEKPFCM 259 (554)
Q Consensus 190 ~~--~vdiViH~AA~v~------~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~-~i-~E~~~~~ 259 (554)
++ ++|+|||+||... +..++.+.+++|+.||.+++++|++. +++ ++++||.++++.... .. +..++++
T Consensus 53 l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~~vy~~~~~~p~~~~~~~~E 130 (298)
T PLN02778 53 IDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATGCIFEYDDAHPLGSGIGFKE 130 (298)
T ss_pred HHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecceEeCCCCCCCcccCCCCCc
Confidence 22 7999999999764 23467789999999999999999985 675 567787788764210 00 0111222
Q ss_pred CCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCC
Q 042694 260 GDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGN 339 (554)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~ 339 (554)
++.. .++.+ .|+.+|..+|.++..+ -+..++|++++++........++..
T Consensus 131 e~~p------------~~~~s------------~Yg~sK~~~E~~~~~y-----~~~~~lr~~~~~~~~~~~~~~fi~~- 180 (298)
T PLN02778 131 EDTP------------NFTGS------------FYSKTKAMVEELLKNY-----ENVCTLRVRMPISSDLSNPRNFITK- 180 (298)
T ss_pred CCCC------------CCCCC------------chHHHHHHHHHHHHHh-----hccEEeeecccCCcccccHHHHHHH-
Confidence 1110 01101 3444455555554432 2567889988776432111122211
Q ss_pred CCccceeeeeccce-eeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHh
Q 042694 340 RMMDPIILYYGKGQ-LTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHY 418 (554)
Q Consensus 340 ~~~~~i~~~~~~G~-~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~ 418 (554)
+..+. .... ..++++|+|++++++.++.. .. ..+||++++ .++++.|+++.+++.+
T Consensus 181 ---------~~~~~~~~~~------~~s~~yv~D~v~al~~~l~~-~~-----~g~yNigs~--~~iS~~el~~~i~~~~ 237 (298)
T PLN02778 181 ---------ITRYEKVVNI------PNSMTILDELLPISIEMAKR-NL-----TGIYNFTNP--GVVSHNEILEMYRDYI 237 (298)
T ss_pred ---------HHcCCCeeEc------CCCCEEHHHHHHHHHHHHhC-CC-----CCeEEeCCC--CcccHHHHHHHHHHHh
Confidence 11111 1111 13799999999999988743 11 259999998 7999999999999999
Q ss_pred ccC
Q 042694 419 SAS 421 (554)
Q Consensus 419 ~~~ 421 (554)
+..
T Consensus 238 ~~~ 240 (298)
T PLN02778 238 DPS 240 (298)
T ss_pred CCC
Confidence 853
No 61
>PLN00016 RNA-binding protein; Provisional
Probab=99.86 E-value=2.9e-21 Score=201.24 Aligned_cols=238 Identities=13% Similarity=0.176 Sum_probs=152.9
Q ss_pred cCcEEEEe----cccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCC
Q 042694 109 KAKNFFVT----GATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLE 182 (554)
Q Consensus 109 ~~~~VlIT----GaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs 182 (554)
.+++|||| |||||+|++|++.|++.|++| +++.+.. ...+.......+.+.....++.+.||+.+.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V---~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~----- 122 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEV---TLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADV----- 122 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEE---EEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHH-----
Confidence 35789999 999999999999999988754 4443221 111110000000111123588899998652
Q ss_pred HHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCC
Q 042694 183 EDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDS 262 (554)
Q Consensus 183 ~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~ 262 (554)
+..- -..++|+|||+++. ++.++++++++|++ .++++|||+||.++|+... +.++.+.+.
T Consensus 123 -~~~~-~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~-~gvkr~V~~SS~~vyg~~~----~~p~~E~~~ 182 (378)
T PLN00016 123 -KSKV-AGAGFDVVYDNNGK-------------DLDEVEPVADWAKS-PGLKQFLFCSSAGVYKKSD----EPPHVEGDA 182 (378)
T ss_pred -Hhhh-ccCCccEEEeCCCC-------------CHHHHHHHHHHHHH-cCCCEEEEEccHhhcCCCC----CCCCCCCCc
Confidence 1111 12479999999763 24578899999998 4899999999999998632 111111111
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCC-ccccccCCCC
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEP-FSGWMEGNRM 341 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p-~~g~~~~~~~ 341 (554)
. . ... +|+.+|.+ .+..+++++|+||+.+||+.... +..|.
T Consensus 183 ~-------------~---------------p~~-sK~~~E~~----l~~~~l~~~ilRp~~vyG~~~~~~~~~~~----- 224 (378)
T PLN00016 183 V-------------K---------------PKA-GHLEVEAY----LQKLGVNWTSFRPQYIYGPGNNKDCEEWF----- 224 (378)
T ss_pred C-------------C---------------Ccc-hHHHHHHH----HHHcCCCeEEEeceeEECCCCCCchHHHH-----
Confidence 0 0 000 23444443 33468999999999999976432 11121
Q ss_pred ccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 342 MDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 342 ~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
+..+..|....++++++...++++++|+|++++.++..... .+++||++++ +++++.|+++.+.+.+|..
T Consensus 225 ----~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~----~~~~yni~~~--~~~s~~el~~~i~~~~g~~ 294 (378)
T PLN00016 225 ----FDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKA----AGQIFNIVSD--RAVTFDGMAKACAKAAGFP 294 (378)
T ss_pred ----HHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccc----cCCEEEecCC--CccCHHHHHHHHHHHhCCC
Confidence 11111222223445677788999999999999988765322 2479999998 7899999999999999875
Q ss_pred C
Q 042694 422 P 422 (554)
Q Consensus 422 p 422 (554)
+
T Consensus 295 ~ 295 (378)
T PLN00016 295 E 295 (378)
T ss_pred C
Confidence 4
No 62
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.85 E-value=2.3e-20 Score=187.47 Aligned_cols=237 Identities=16% Similarity=0.185 Sum_probs=146.3
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcC
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKE 192 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~ 192 (554)
|||||||||||+++++.|+++++ +|+++.+.... .... ....+ .|+.. ........+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~-----~~~~----~~~~~----~~~~~-------~~~~~~~~~ 57 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH---EVTILTRSPPA-----GANT----KWEGY----KPWAP-------LAESEALEG 57 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC---EEEEEeCCCCC-----CCcc----cceee----ecccc-------cchhhhcCC
Confidence 69999999999999999999875 55655532110 0000 00011 11111 122334468
Q ss_pred ccEEEEcCCCCCch-----hhHHHHHHHhchHHHHHHHHHHHcCCC--ceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 193 VDVIVNSAANTTFD-----ERYDIAIDINTRGPCRLMEFAKQCNKL--KLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 193 vdiViH~AA~v~~~-----~~~~~~~~~Nv~gt~~ll~la~~~~~~--k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
+|+|||+||..... .....+.++|+.+|++++++|++. +. ..|++.||.++|+... +.++++..+.
T Consensus 58 ~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg~~~----~~~~~E~~~~-- 130 (292)
T TIGR01777 58 ADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYGTSE----DRVFTEEDSP-- 130 (292)
T ss_pred CCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeCCCC----CCCcCcccCC--
Confidence 99999999975432 245678899999999999999985 44 4677788888887532 1122222110
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccce
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPI 345 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i 345 (554)
.+.+..... +...|.....+ .+.+++++|+||+.|||+... +.... . ..
T Consensus 131 -----------~~~~~~~~~------------~~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~----~~~~~--~-~~ 179 (292)
T TIGR01777 131 -----------AGDDFLAEL------------CRDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGG----ALAKM--L-PP 179 (292)
T ss_pred -----------CCCChHHHH------------HHHHHHHhhhc-hhcCCceEEEeeeeEECCCcc----hhHHH--H-HH
Confidence 011111110 01112222222 235899999999999997532 21110 0 00
Q ss_pred eeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 346 ILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 346 ~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
+. ...+. ..++++...++|+|||+|+++..++..... ..+||++++ .++++.|+++.+.+.+|.+
T Consensus 180 ~~-~~~~~---~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-----~g~~~~~~~--~~~s~~di~~~i~~~~g~~ 244 (292)
T TIGR01777 180 FR-LGLGG---PLGSGRQWFSWIHIEDLVQLILFALENASI-----SGPVNATAP--EPVRNKEFAKALARALHRP 244 (292)
T ss_pred Hh-cCccc---ccCCCCcccccEeHHHHHHHHHHHhcCccc-----CCceEecCC--CccCHHHHHHHHHHHhCCC
Confidence 00 01111 135677889999999999999988754322 358999998 7999999999999999863
No 63
>cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases. C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear.
Probab=99.83 E-value=3.7e-21 Score=158.10 Aligned_cols=91 Identities=37% Similarity=0.527 Sum_probs=74.5
Q ss_pred HHHHHHHHHHhcccccccccCcchHHHHHHHHHHHHHHHHHHHhccccccceEEEechhHHHHHHhcChhhccccccCCC
Q 042694 447 AHLWRDAIQRSGLTSTANLNGKLPQKLETICRKSVEQAKHLADIYEPYTFYGGRFDNSNTERLMEKMSEEEKRKFGFDVG 526 (554)
Q Consensus 447 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~l~~~D~~~F~~d~~ 526 (554)
.|.+|+.+.+..+... .+++.+.++++|+. +++++++||++++|+|+++|+++|++.|+++||++|+||++
T Consensus 2 ~~~lpa~~~d~~~~l~--g~~~~~~~~~~k~~-------~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr~~F~fD~~ 72 (92)
T cd09071 2 LHLLPAYLLDLLLRLL--GRKPRLLKLYRKIH-------KLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDIR 72 (92)
T ss_pred cccchHHHHHHHHHHh--CCChHHHHHHHHHH-------HHHHHhhccccCeEEeeCcHHHHHHHHCCHHHHHhCCCCCC
Confidence 3667777766432221 23445556666654 46799999999999999999999999999999999999999
Q ss_pred CCCHHHHHHhhchhHHHHHhh
Q 042694 527 SIDWKEYITNVHIPGLRRHVM 547 (554)
Q Consensus 527 ~idW~~Y~~~~~~~G~r~y~l 547 (554)
+|||++|+++ +++|+|+|++
T Consensus 73 ~idW~~Y~~~-~~~G~r~yll 92 (92)
T cd09071 73 SIDWDDYFEN-YIPGLRKYLL 92 (92)
T ss_pred CCCHHHHHHH-HHHHHHHHhC
Confidence 9999999999 7999999986
No 64
>PRK05865 hypothetical protein; Provisional
Probab=99.82 E-value=2.4e-19 Score=198.98 Aligned_cols=200 Identities=17% Similarity=0.176 Sum_probs=145.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|+|||||||+|++++++|++.+++ |+.+++...+ . ...++..+.+|+.++ +.+..++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~---Vv~l~R~~~~----~--------~~~~v~~v~gDL~D~------~~l~~al 59 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHE---VVGIARHRPD----S--------WPSSADFIAADIRDA------TAVESAM 59 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCchh----h--------cccCceEEEeeCCCH------HHHHHHH
Confidence 47999999999999999999998864 4444432111 0 113577899999988 7888888
Q ss_pred cCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccccc
Q 042694 191 KEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVS 270 (554)
Q Consensus 191 ~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~ 270 (554)
+++|+|||+|+.... ..++|+.||.+++++|++. ++++|||+||.. +
T Consensus 60 ~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~-----K--------------------- 106 (854)
T PRK05865 60 TGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSGH-----Q--------------------- 106 (854)
T ss_pred hCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH-----H---------------------
Confidence 899999999986432 4688999999999999984 788999999853 0
Q ss_pred cccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeec
Q 042694 271 NSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYG 350 (554)
Q Consensus 271 ~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~ 350 (554)
..+|+++ ...+++++|+||++|||+.. +.|+.... .
T Consensus 107 ----------------------------~aaE~ll----~~~gl~~vILRp~~VYGP~~---~~~i~~ll---~------ 142 (854)
T PRK05865 107 ----------------------------PRVEQML----ADCGLEWVAVRCALIFGRNV---DNWVQRLF---A------ 142 (854)
T ss_pred ----------------------------HHHHHHH----HHcCCCEEEEEeceEeCCCh---HHHHHHHh---c------
Confidence 1122222 23589999999999999752 23432210 0
Q ss_pred cceeeee-ecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhH
Q 042694 351 KGQLTGF-LVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEH 417 (554)
Q Consensus 351 ~G~~~~~-~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~ 417 (554)
.+.+ .++.+...|+|||||+|++++.++..... .+.+||++++ +++|+.|+++.+.+.
T Consensus 143 ---~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~----~ggvyNIgsg--~~~Si~EIae~l~~~ 201 (854)
T PRK05865 143 ---LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVI----DSGPVNLAAP--GELTFRRIAAALGRP 201 (854)
T ss_pred ---CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCc----CCCeEEEECC--CcccHHHHHHHHhhh
Confidence 0111 12344567999999999999888753221 2469999998 789999999988764
No 65
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.79 E-value=7.6e-18 Score=158.98 Aligned_cols=234 Identities=16% Similarity=0.228 Sum_probs=151.3
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc-
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK- 191 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~- 191 (554)
|+|||||||||++|+..|.+.+++| +++.+... +.... ....+..+ +.++....
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v---~iltR~~~-~~~~~--------~~~~v~~~-------------~~~~~~~~~ 55 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQV---TILTRRPP-KASQN--------LHPNVTLW-------------EGLADALTL 55 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeE---EEEEcCCc-chhhh--------cCcccccc-------------chhhhcccC
Confidence 6899999999999999999988865 33322110 00000 01111100 22223333
Q ss_pred CccEEEEcCCCC----Cchhh-HHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecccccceeeccccCCCCCccc
Q 042694 192 EVDVIVNSAANT----TFDER-YDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAK 265 (554)
Q Consensus 192 ~vdiViH~AA~v----~~~~~-~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~ 265 (554)
++|+|||+|+.. ++.+. -+..++.-+..|+.|.++..++ .+.+.|+--|.+.-||+.. ++.++|..+
T Consensus 56 ~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~----~~~~tE~~~--- 128 (297)
T COG1090 56 GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSG----DRVVTEESP--- 128 (297)
T ss_pred CCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCC----ceeeecCCC---
Confidence 799999999963 24443 4577888999999999998854 3566777777777788753 444444322
Q ss_pred ccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccce
Q 042694 266 ENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPI 345 (554)
Q Consensus 266 ~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i 345 (554)
+..+...++.. .|..+.+ .+ +..|.+++++|.|+|.|+....++-.. +.
T Consensus 129 -----------~g~~Fla~lc~----------~WE~~a~--~a-~~~gtRvvllRtGvVLs~~GGaL~~m~-------~~ 177 (297)
T COG1090 129 -----------PGDDFLAQLCQ----------DWEEEAL--QA-QQLGTRVVLLRTGVVLSPDGGALGKML-------PL 177 (297)
T ss_pred -----------CCCChHHHHHH----------HHHHHHh--hh-hhcCceEEEEEEEEEecCCCcchhhhc-------ch
Confidence 11222111110 1211111 11 345899999999999996653322221 11
Q ss_pred eeeecc-ceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 346 ILYYGK-GQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 346 ~~~~~~-G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
+. .+. |.+ +++...+.|||+||++++|..+....... ..||+++| +|++..+|.+.+.+.++++
T Consensus 178 fk-~glGG~~----GsGrQ~~SWIhieD~v~~I~fll~~~~ls-----Gp~N~taP--~PV~~~~F~~al~r~l~RP 242 (297)
T COG1090 178 FK-LGLGGKL----GSGRQWFSWIHIEDLVNAILFLLENEQLS-----GPFNLTAP--NPVRNKEFAHALGRALHRP 242 (297)
T ss_pred hh-hccCCcc----CCCCceeeeeeHHHHHHHHHHHHhCcCCC-----CcccccCC--CcCcHHHHHHHHHHHhCCC
Confidence 11 122 333 78888999999999999999998876553 48999999 9999999999999999875
No 66
>PRK12320 hypothetical protein; Provisional
Probab=99.77 E-value=6.8e-18 Score=183.75 Aligned_cols=201 Identities=15% Similarity=0.162 Sum_probs=136.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||||||||||++|+++|+++++ +|.++++.... . ...++.++.+|+.++ . +..+.
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~---~Vi~ldr~~~~-----~-------~~~~ve~v~~Dl~d~------~-l~~al 58 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH---TVSGIAQHPHD-----A-------LDPRVDYVCASLRNP------V-LQELA 58 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeCChhh-----c-------ccCCceEEEccCCCH------H-HHHHh
Confidence 4799999999999999999999886 45566542110 0 123577899999876 3 45666
Q ss_pred cCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccccc
Q 042694 191 KEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVS 270 (554)
Q Consensus 191 ~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~ 270 (554)
.++|+|||+|+.... . ...+|+.|+.+++++|++. +. ++||+||.+ +... .+
T Consensus 59 ~~~D~VIHLAa~~~~-~----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~--G~~~------~~------------- 110 (699)
T PRK12320 59 GEADAVIHLAPVDTS-A----PGGVGITGLAHVANAAARA-GA-RLLFVSQAA--GRPE------LY------------- 110 (699)
T ss_pred cCCCEEEEcCccCcc-c----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC--CCCc------cc-------------
Confidence 789999999986422 1 2358999999999999985 65 699999863 2110 00
Q ss_pred cccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCc-cccccCCCCccceeeee
Q 042694 271 NSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPF-SGWMEGNRMMDPIILYY 349 (554)
Q Consensus 271 ~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~-~g~~~~~~~~~~i~~~~ 349 (554)
+ .+|.+. ...++|++|+|+++|||+...+. ...+ ..++
T Consensus 111 ------~----------------------~aE~ll----~~~~~p~~ILR~~nVYGp~~~~~~~r~I------~~~l--- 149 (699)
T PRK12320 111 ------R----------------------QAETLV----STGWAPSLVIRIAPPVGRQLDWMVCRTV------ATLL--- 149 (699)
T ss_pred ------c----------------------HHHHHH----HhcCCCEEEEeCceecCCCCcccHhHHH------HHHH---
Confidence 0 122222 22468999999999999743211 0111 1101
Q ss_pred ccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhH
Q 042694 350 GKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEH 417 (554)
Q Consensus 350 ~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~ 417 (554)
.... .+..+.+++|||++++++.++.... ..+||++++ +.+|+.|+++.+...
T Consensus 150 -~~~~------~~~pI~vIyVdDvv~alv~al~~~~------~GiyNIG~~--~~~Si~el~~~i~~~ 202 (699)
T PRK12320 150 -RSKV------SARPIRVLHLDDLVRFLVLALNTDR------NGVVDLATP--DTTNVVTAWRLLRSV 202 (699)
T ss_pred -HHHH------cCCceEEEEHHHHHHHHHHHHhCCC------CCEEEEeCC--CeeEHHHHHHHHHHh
Confidence 0111 1223456999999999988875411 249999999 789999998888765
No 67
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.75 E-value=1.8e-17 Score=185.21 Aligned_cols=221 Identities=12% Similarity=0.112 Sum_probs=140.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
..|+|||||||||||++|++.|++.+.+| ....+|++++ +.+..
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v------------------------------~~~~~~l~d~------~~v~~ 422 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAY------------------------------EYGKGRLEDR------SSLLA 422 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeE------------------------------EeeccccccH------HHHHH
Confidence 34789999999999999999999876543 1223566655 44444
Q ss_pred Hhc--CccEEEEcCCCCC---c---hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccccee--eccccC
Q 042694 189 IAK--EVDVIVNSAANTT---F---DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKV--MEKPFC 258 (554)
Q Consensus 189 l~~--~vdiViH~AA~v~---~---~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i--~E~~~~ 258 (554)
+++ ++|+||||||... . ..++..++++|+.||.+|+++|++. +++ ++|+||.+|++...... .+.++.
T Consensus 423 ~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~ 500 (668)
T PLN02260 423 DIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFATGCIFEYDAKHPEGSGIGFK 500 (668)
T ss_pred HHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcccceecCCcccccccCCCCC
Confidence 444 7999999999763 2 2467889999999999999999995 675 77889999986421000 012333
Q ss_pred CCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccC
Q 042694 259 MGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEG 338 (554)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~ 338 (554)
+++... ++.+ .|+.+|..+|.++..+ -...++|+..+||.......+++
T Consensus 501 E~~~~~------------~~~~------------~Yg~sK~~~E~~~~~~-----~~~~~~r~~~~~~~~~~~~~nfv-- 549 (668)
T PLN02260 501 EEDKPN------------FTGS------------FYSKTKAMVEELLREY-----DNVCTLRVRMPISSDLSNPRNFI-- 549 (668)
T ss_pred cCCCCC------------CCCC------------hhhHHHHHHHHHHHhh-----hhheEEEEEEecccCCCCccHHH--
Confidence 322110 1101 3555566666665432 25788899999864321111111
Q ss_pred CCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHh
Q 042694 339 NRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHY 418 (554)
Q Consensus 339 ~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~ 418 (554)
..++ .... .+ .+ + .+...+|+++.+++.++.. . .+.+||++++ .++||.|+++.+.+..
T Consensus 550 ----~~~~-~~~~-~~-~v---p---~~~~~~~~~~~~~~~l~~~-~-----~~giyni~~~--~~~s~~e~a~~i~~~~ 608 (668)
T PLN02260 550 ----TKIS-RYNK-VV-NI---P---NSMTVLDELLPISIEMAKR-N-----LRGIWNFTNP--GVVSHNEILEMYKDYI 608 (668)
T ss_pred ----HHHh-ccce-ee-cc---C---CCceehhhHHHHHHHHHHh-C-----CCceEEecCC--CcCcHHHHHHHHHHhc
Confidence 1111 1111 11 11 1 2456678888887776643 1 1369999998 6899999999999876
Q ss_pred c
Q 042694 419 S 419 (554)
Q Consensus 419 ~ 419 (554)
+
T Consensus 609 ~ 609 (668)
T PLN02260 609 D 609 (668)
T ss_pred C
Confidence 4
No 68
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.73 E-value=1.4e-17 Score=156.45 Aligned_cols=242 Identities=17% Similarity=0.168 Sum_probs=166.4
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHH-HcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQ-TYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~-~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
...+.|-.+-|.|||||||+.++.+|-+.|.+| |+-.+.+..+-..- -.+ .+..+.+..-|+.++
T Consensus 56 RsS~sGiVaTVFGAtGFlGryvvnklak~GSQv--iiPyR~d~~~~r~lkvmG------dLGQvl~~~fd~~De------ 121 (391)
T KOG2865|consen 56 RSSVSGIVATVFGATGFLGRYVVNKLAKMGSQV--IIPYRGDEYDPRHLKVMG------DLGQVLFMKFDLRDE------ 121 (391)
T ss_pred cccccceEEEEecccccccHHHHHHHhhcCCeE--EEeccCCccchhheeecc------cccceeeeccCCCCH------
Confidence 344667778899999999999999999988765 33233222221111 111 356778888898887
Q ss_pred HHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCc
Q 042694 184 DLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSI 263 (554)
Q Consensus 184 ~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~ 263 (554)
+.++...+..++|||+-+.---..++ .+.++|+.+.+.+.+.|+++ ++.+|||+|+...+-...
T Consensus 122 dSIr~vvk~sNVVINLIGrd~eTknf-~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv~s~-------------- 185 (391)
T KOG2865|consen 122 DSIRAVVKHSNVVINLIGRDYETKNF-SFEDVNVHIAERLARICKEA-GVERFIHVSCLGANVKSP-------------- 185 (391)
T ss_pred HHHHHHHHhCcEEEEeeccccccCCc-ccccccchHHHHHHHHHHhh-ChhheeehhhccccccCh--------------
Confidence 88999999999999998852111222 56889999999999999995 999999999986432110
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcc
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMD 343 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~ 343 (554)
..++. +|...|.++...--..+|+||+.|||..+..+.-|..-.+.+
T Consensus 186 ----------------------Sr~Lr----------sK~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk~- 232 (391)
T KOG2865|consen 186 ----------------------SRMLR----------SKAAGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFWRKF- 232 (391)
T ss_pred ----------------------HHHHH----------hhhhhHHHHHhhCCcceeechhhhcccchhHHHHHHHHHHhc-
Confidence 11121 233444444333456899999999997764444443222222
Q ss_pred ceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccCCC
Q 042694 344 PIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSASPC 423 (554)
Q Consensus 344 ~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~p~ 423 (554)
|.++-+.......-..|+|-|||.+|+.|+.++.. .+++|..++| ...++.|+++++.+...+-|.
T Consensus 233 --------~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s----~Gktye~vGP--~~yql~eLvd~my~~~~~~~r 298 (391)
T KOG2865|consen 233 --------GFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDS----MGKTYEFVGP--DRYQLSELVDIMYDMAREWPR 298 (391)
T ss_pred --------CceeeecCCcceeeccEEEehHHHHHHHhccCccc----cCceeeecCC--chhhHHHHHHHHHHHHhhccc
Confidence 22332222223345678999999999999877644 3689999999 788999999999998887663
No 69
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.73 E-value=1.4e-16 Score=159.56 Aligned_cols=209 Identities=13% Similarity=0.151 Sum_probs=139.9
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh-
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA- 190 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~- 190 (554)
+|+||||||++|++++++|++++.+| ++. .+++. +. ...++..+.+|+.++ +.+...+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V-~~~-~R~~~--~~-----------~~~~~~~~~~d~~d~------~~l~~a~~ 59 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPF-LVA-SRSSS--SS-----------AGPNEKHVKFDWLDE------DTWDNPFS 59 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcE-EEE-eCCCc--cc-----------cCCCCccccccCCCH------HHHHHHHh
Confidence 48999999999999999999988765 222 22211 00 113556688999888 7777776
Q ss_pred -----cC-ccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 191 -----KE-VDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 191 -----~~-vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
++ +|.|||+++.... . +..+.+++++|++. ++++|||+||..+.....
T Consensus 60 ~~~~~~g~~d~v~~~~~~~~~--~--------~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~~~~~--------------- 113 (285)
T TIGR03649 60 SDDGMEPEISAVYLVAPPIPD--L--------APPMIKFIDFARSK-GVRRFVLLSASIIEKGGP--------------- 113 (285)
T ss_pred cccCcCCceeEEEEeCCCCCC--h--------hHHHHHHHHHHHHc-CCCEEEEeeccccCCCCc---------------
Confidence 56 9999999875421 1 13456899999984 899999999865432100
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDP 344 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~ 344 (554)
. . ...+...+ +..|++++++||+.++.....+ .+.. .
T Consensus 114 ------------~----~----------------~~~~~~l~---~~~gi~~tilRp~~f~~~~~~~--~~~~------~ 150 (285)
T TIGR03649 114 ------------A----M----------------GQVHAHLD---SLGGVEYTVLRPTWFMENFSEE--FHVE------A 150 (285)
T ss_pred ------------h----H----------------HHHHHHHH---hccCCCEEEEeccHHhhhhccc--cccc------c
Confidence 0 0 00011111 1148999999999887533111 0000 0
Q ss_pred eeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 345 IILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 345 i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
....|.+ +.+.++...++|+++|+++++..++..+.. .+++|+++++ .++|+.|+++.+.+.+|++
T Consensus 151 ---~~~~~~~--~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~----~~~~~~l~g~--~~~s~~eia~~l~~~~g~~ 216 (285)
T TIGR03649 151 ---IRKENKI--YSATGDGKIPFVSADDIARVAYRALTDKVA----PNTDYVVLGP--ELLTYDDVAEILSRVLGRK 216 (285)
T ss_pred ---cccCCeE--EecCCCCccCcccHHHHHHHHHHHhcCCCc----CCCeEEeeCC--ccCCHHHHHHHHHHHhCCc
Confidence 0112332 224467788999999999999888765322 2478999998 7999999999999999974
No 70
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.72 E-value=1.7e-16 Score=148.08 Aligned_cols=182 Identities=18% Similarity=0.231 Sum_probs=126.2
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcC
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKE 192 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~ 192 (554)
|+|+||||++|+.++++|+++++ +|+++.+... ++.+ ..+++++.||+.++ +.+...+++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~---~V~~~~R~~~-~~~~----------~~~~~~~~~d~~d~------~~~~~al~~ 60 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH---EVTALVRSPS-KAED----------SPGVEIIQGDLFDP------DSVKAALKG 60 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS---EEEEEESSGG-GHHH----------CTTEEEEESCTTCH------HHHHHHHTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC---EEEEEecCch-hccc----------ccccccceeeehhh------hhhhhhhhh
Confidence 79999999999999999999885 4454432211 1111 46899999999988 888888899
Q ss_pred ccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccccccc
Q 042694 193 VDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNS 272 (554)
Q Consensus 193 vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~ 272 (554)
+|+|||+++.... +...+++++++|++. ++++++++||++++....+...... .
T Consensus 61 ~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~~~~-----~---------- 114 (183)
T PF13460_consen 61 ADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFSDED-----K---------- 114 (183)
T ss_dssp SSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEEGGT-----C----------
T ss_pred cchhhhhhhhhcc----------ccccccccccccccc-ccccceeeeccccCCCCCccccccc-----c----------
Confidence 9999999975433 177889999999995 8999999999998886432110000 0
Q ss_pred cCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeeccc
Q 042694 273 RRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKG 352 (554)
Q Consensus 273 ~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G 352 (554)
+.. . .+...+..+|...+..+++++++||+.++|..... + .++
T Consensus 115 ----~~~------~----------~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~~--~---------~~~------ 157 (183)
T PF13460_consen 115 ----PIF------P----------EYARDKREAEEALRESGLNWTIVRPGWIYGNPSRS--Y---------RLI------ 157 (183)
T ss_dssp ----GGG------H----------HHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSSS--E---------EEE------
T ss_pred ----cch------h----------hhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCcc--e---------eEE------
Confidence 000 1 11223334455555569999999999999964320 0 000
Q ss_pred eeeeeecCCCcccccchhhHHHHHHHHHHH
Q 042694 353 QLTGFLVDPNGILDVVPADMVVNATLAAIA 382 (554)
Q Consensus 353 ~~~~~~~~~~~~~d~vpVD~va~aii~~~~ 382 (554)
..........|+++|+|.+++.++.
T Consensus 158 -----~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 158 -----KEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp -----SSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred -----eccCCCCcCcCCHHHHHHHHHHHhC
Confidence 0123444689999999999998874
No 71
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.72 E-value=3.3e-16 Score=153.85 Aligned_cols=234 Identities=19% Similarity=0.215 Sum_probs=144.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++|+||||||++|+.++++|++.+++ |+++.+.. ++.....+ ...++.++.||+.+. .+.+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~---V~~~~R~~-~~~~~~~~------~~~~~~~~~~Dl~d~-----~~~l~ 79 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFA---VKAGVRDV-DKAKTSLP------QDPSLQIVRADVTEG-----SDKLV 79 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCE---EEEEecCH-HHHHHhcc------cCCceEEEEeeCCCC-----HHHHH
Confidence 45789999999999999999999998764 44433221 12222111 123688999999874 24454
Q ss_pred HHh-cCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccc
Q 042694 188 VIA-KEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKE 266 (554)
Q Consensus 188 ~l~-~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~ 266 (554)
... .++|+|||+++......+ .....+|+.|+.++++++++ .++++||++||..+++...+ .++.
T Consensus 80 ~~~~~~~d~vi~~~g~~~~~~~-~~~~~~n~~~~~~ll~a~~~-~~~~~iV~iSS~~v~g~~~~----~~~~-------- 145 (251)
T PLN00141 80 EAIGDDSDAVICATGFRRSFDP-FAPWKVDNFGTVNLVEACRK-AGVTRFILVSSILVNGAAMG----QILN-------- 145 (251)
T ss_pred HHhhcCCCEEEECCCCCcCCCC-CCceeeehHHHHHHHHHHHH-cCCCEEEEEccccccCCCcc----cccC--------
Confidence 445 689999999886322122 22357899999999999998 57899999999998875321 0000
Q ss_pred cccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCcccee
Q 042694 267 NFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPII 346 (554)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~ 346 (554)
+ .+...+.+.. ....+..+|......|++++++||+.+++... .+ ...
T Consensus 146 ----------~---~~~~~~~~~~-------~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~---~~---------~~~ 193 (251)
T PLN00141 146 ----------P---AYIFLNLFGL-------TLVAKLQAEKYIRKSGINYTIVRPGGLTNDPP---TG---------NIV 193 (251)
T ss_pred ----------c---chhHHHHHHH-------HHHHHHHHHHHHHhcCCcEEEEECCCccCCCC---Cc---------eEE
Confidence 0 0000010000 01123334444444689999999999986321 11 000
Q ss_pred eeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCc-ccHHHHHHHHHh
Q 042694 347 LYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNP-LVFQDLARLLHE 416 (554)
Q Consensus 347 ~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~-it~~e~~~~~~~ 416 (554)
. . ........+|+.+|+|+++..++..+.. ...++.+.+...++ .++.++...+++
T Consensus 194 ~--~--------~~~~~~~~~i~~~dvA~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 194 M--E--------PEDTLYEGSISRDQVAEVAVEALLCPES----SYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred E--C--------CCCccccCcccHHHHHHHHHHHhcChhh----cCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 0 0 0111113468999999999998765432 24678887744454 788888877654
No 72
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.70 E-value=4.1e-16 Score=155.41 Aligned_cols=238 Identities=16% Similarity=0.129 Sum_probs=143.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|||||||||||++++++|++.+. +|+++.+. ..+.++.. ...++..+.+|++++ +...
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~---~v~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~------~~~~ 64 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGD---RVAATVRRPDALDDLKAR--------YGDRLWVLQLDVTDS------AAVR 64 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHh--------ccCceEEEEccCCCH------HHHH
Confidence 36899999999999999999999876 44544432 12222222 234788899999988 5555
Q ss_pred HHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+. .++|+|||+|+.... .+.++...++|+.|+.++++.+... .+.+++|++||.......
T Consensus 65 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-- 142 (276)
T PRK06482 65 AVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAY-- 142 (276)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCC--
Confidence 543 258999999997543 2456788899999999999998321 356799999996432110
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhh---cCCCcEEEEccceeeec
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLE---RGDIPVVIIRPSVIEST 327 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~---~~glp~~I~Rp~~V~g~ 327 (554)
+... .|..+|+..+.+.+.... ..|++++++||+.+..+
T Consensus 143 --------------------------~~~~------------~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~ 184 (276)
T PRK06482 143 --------------------------PGFS------------LYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTN 184 (276)
T ss_pred --------------------------CCCc------------hhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccC
Confidence 1111 234445555555544332 35899999999988332
Q ss_pred ccCCc--cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcc
Q 042694 328 CKEPF--SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPL 405 (554)
Q Consensus 328 ~~~p~--~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~i 405 (554)
..... ...... ...... . ...+.+ .+... .-+.++++++++++.++.... ....||++++ +..
T Consensus 185 ~~~~~~~~~~~~~---~~~~~~--~-~~~~~~-~~~~~-~~~~d~~~~~~a~~~~~~~~~-----~~~~~~~g~~--~~~ 249 (276)
T PRK06482 185 FGAGLDRGAPLDA---YDDTPV--G-DLRRAL-ADGSF-AIPGDPQKMVQAMIASADQTP-----APRRLTLGSD--AYA 249 (276)
T ss_pred CcccccccCCCcc---ccchhh--H-HHHHHH-hhccC-CCCCCHHHHHHHHHHHHcCCC-----CCeEEecChH--HHH
Confidence 21100 000000 000000 0 000000 01111 113578999999999875322 2357999998 667
Q ss_pred cHHHHHHHHHhHhc
Q 042694 406 VFQDLARLLHEHYS 419 (554)
Q Consensus 406 t~~e~~~~~~~~~~ 419 (554)
+..|+++.+.+...
T Consensus 250 ~~~~~~~~~~~~~~ 263 (276)
T PRK06482 250 SIRAALSERLAALE 263 (276)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777766665544
No 73
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.66 E-value=1.9e-15 Score=149.29 Aligned_cols=228 Identities=12% Similarity=0.119 Sum_probs=137.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++||||||||+||++++++|++.+.+| +++.+ ...+.+.+.... ...++..+.+|++++ +.
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v---~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~ 70 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAV---AIADLNQDGANAVADEINK-----AGGKAIGVAMDVTNE------DA 70 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeE---EEEeCChHHHHHHHHHHHh-----cCceEEEEECCCCCH------HH
Confidence 357899999999999999999999988754 44332 222233222211 124678899999987 55
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchH----HHHHHHHH-HHcCCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRG----PCRLMEFA-KQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~g----t~~ll~la-~~~~~~k~~v~vST~~v~~ 246 (554)
.+.+.+ .+|+|||+|+.... .+.++...++|+.| ++++++++ +. .+.+++|++||.+...
T Consensus 71 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~~~~iv~~ss~~~~~ 149 (262)
T PRK13394 71 VNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD-DRGGVVIYMGSVHSHE 149 (262)
T ss_pred HHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh-cCCcEEEEEcchhhcC
Confidence 554443 48999999997532 24567888899999 67777777 54 4678999999964432
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEccc
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPS 322 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~ 322 (554)
... ... .|..+|. +++.+++... ..+++++++||+
T Consensus 150 ~~~----------------------------~~~------------~y~~sk~a~~~~~~~la~~~~-~~~i~v~~v~pg 188 (262)
T PRK13394 150 ASP----------------------------LKS------------AYVTAKHGLLGLARVLAKEGA-KHNVRSHVVCPG 188 (262)
T ss_pred CCC----------------------------CCc------------ccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeC
Confidence 110 001 1222222 2333333322 248999999999
Q ss_pred eeeecccC-CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 323 VIESTCKE-PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 323 ~V~g~~~~-p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.++++... .++...... . ... ......+........++++++|++++++.++..... ...+.+|++.++
T Consensus 189 ~v~~~~~~~~~~~~~~~~----~--~~~-~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~--~~~g~~~~~~~g 258 (262)
T PRK13394 189 FVRTPLVDKQIPEQAKEL----G--ISE-EEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSA--ALTGQSFVVSHG 258 (262)
T ss_pred cccchhhhhhhHhhhhcc----C--CCh-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCcccc--CCcCCEEeeCCc
Confidence 99875421 111111000 0 000 000001111223346899999999999988764321 123578888765
No 74
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.66 E-value=4.3e-15 Score=157.37 Aligned_cols=241 Identities=15% Similarity=0.099 Sum_probs=144.8
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCc-h---hhhccCcEEEEEccCCCCCCCC
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKS-Y---QAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~-~---~~~~~~kv~~v~GDl~~~~lGL 181 (554)
+..+|++||||||||+||++++++|++.|.+| .++..+......+....... . ......++.++.||+.+.
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~V-val~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~---- 150 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRV-RAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP---- 150 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeE-EEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH----
Confidence 44678999999999999999999999988754 22222222222222211100 0 000124688999999987
Q ss_pred CHHHHHHHhcCccEEEEcCCCCCch-hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCC
Q 042694 182 EEDLADVIAKEVDVIVNSAANTTFD-ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMG 260 (554)
Q Consensus 182 s~~~~~~l~~~vdiViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~ 260 (554)
+++...+.++|+|||+||..... ..+...+++|+.|+.+++++|++. ++++||++||.+++.... .+.
T Consensus 151 --esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~~~g~---p~~----- 219 (576)
T PLN03209 151 --DQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTNKVGF---PAA----- 219 (576)
T ss_pred --HHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhcccCc---ccc-----
Confidence 77888888999999999875321 235566889999999999999984 789999999986531100 000
Q ss_pred CCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCC
Q 042694 261 DSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNR 340 (554)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~ 340 (554)
. ...... +...++.+|......|++++|+|||.+.++..+ +...
T Consensus 220 -----------------~---~~sk~~----------~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~----~~~t-- 263 (576)
T PLN03209 220 -----------------I---LNLFWG----------VLCWKRKAEEALIASGLPYTIVRPGGMERPTDA----YKET-- 263 (576)
T ss_pred -----------------c---hhhHHH----------HHHHHHHHHHHHHHcCCCEEEEECCeecCCccc----cccc--
Confidence 0 000000 112234444444456999999999999764321 1000
Q ss_pred CccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCc-ccHHHHHHH
Q 042694 341 MMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNP-LVFQDLARL 413 (554)
Q Consensus 341 ~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~-it~~e~~~~ 413 (554)
..+... ..+ ....-.+..+|||++++.++..... ..+.+|.+.++...+ ..+.+++..
T Consensus 264 --~~v~~~-~~d---------~~~gr~isreDVA~vVvfLasd~~a---s~~kvvevi~~~~~p~~~~~~~~~~ 322 (576)
T PLN03209 264 --HNLTLS-EED---------TLFGGQVSNLQVAELMACMAKNRRL---SYCKVVEVIAETTAPLTPMEELLAK 322 (576)
T ss_pred --cceeec-ccc---------ccCCCccCHHHHHHHHHHHHcCchh---ccceEEEEEeCCCCCCCCHHHHHHh
Confidence 111100 000 0011246778899999988764332 125789888863221 344554443
No 75
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.64 E-value=3.8e-15 Score=148.41 Aligned_cols=235 Identities=14% Similarity=0.131 Sum_probs=142.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++||||||||+||++++++|++++. +|+++.+.. .+.+.+. ...++..+.+|++++ +...
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~---~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~------~~~~ 65 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD---RVVATARDTATLADLAEK--------YGDRLLPLALDVTDR------AAVF 65 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHh--------ccCCeeEEEccCCCH------HHHH
Confidence 57899999999999999999998875 455554321 2222221 234677889999987 5555
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeeceeccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+ .+|+|||+||.... .+.++..+++|+.++..+++.+ ++ .+.+++|++||...+....
T Consensus 66 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~ 144 (275)
T PRK08263 66 AAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLRE-QRSGHIIQISSIGGISAFP 144 (275)
T ss_pred HHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCEEEEEcChhhcCCCC
Confidence 4433 68999999997643 2578899999999998888776 33 3567999999976644321
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeee
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIES 326 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g 326 (554)
... .|..+|...+.+.+... ...|+++.++|||.+..
T Consensus 145 ----------------------------~~~------------~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t 184 (275)
T PRK08263 145 ----------------------------MSG------------IYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYST 184 (275)
T ss_pred ----------------------------Ccc------------HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccC
Confidence 001 12223333333332222 23589999999998865
Q ss_pred cccCCccccccCCCCccceeeeeccceeeeeecCCCccccc-chhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcc
Q 042694 327 TCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDV-VPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPL 405 (554)
Q Consensus 327 ~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~-vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~i 405 (554)
+...+.............+.... .+......+ +.++|++++++.++..... ..+.++.+.+ .++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~p~dva~~~~~l~~~~~~----~~~~~~~~~~--~~~ 249 (275)
T PRK08263 185 DWAGTSAKRATPLDAYDTLREEL---------AEQWSERSVDGDPEAAAEALLKLVDAENP----PLRLFLGSGV--LDL 249 (275)
T ss_pred CccccccccCCCchhhhhHHHHH---------HHHHHhccCCCCHHHHHHHHHHHHcCCCC----CeEEEeCchH--HHH
Confidence 43321100000000000100000 000111234 7889999999998765322 2345544444 578
Q ss_pred cHHHHHHHHHhH
Q 042694 406 VFQDLARLLHEH 417 (554)
Q Consensus 406 t~~e~~~~~~~~ 417 (554)
++.++.+.+.++
T Consensus 250 ~~~~~~~~~~~~ 261 (275)
T PRK08263 250 AKADYERRLATW 261 (275)
T ss_pred HHHHHHHHHHHH
Confidence 889988888875
No 76
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.63 E-value=6.9e-15 Score=144.57 Aligned_cols=227 Identities=12% Similarity=0.068 Sum_probs=135.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++||||||||+||++|+++|++.+. +|+++.+. ..+.+..... ....++..+.+|+.++ ++..
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~------~~~~ 66 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA---NVVVNDLGEAGAEAAAKVAT-----DAGGSVIYLVADVTKE------DEIA 66 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHH-----hcCCceEEEECCCCCH------HHHH
Confidence 46899999999999999999999876 45555432 2222222211 0234688999999987 5443
Q ss_pred HH-------hcCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VI-------AKEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l-------~~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+ ...+|+|||+|+.... .+.++..++.|+.|+..+++.+... .+.+++|++||........+
T Consensus 67 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~ 146 (255)
T TIGR01963 67 DMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF 146 (255)
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC
Confidence 33 3468999999987542 2356788899999988888877321 35679999999755432110
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
.. .|..+|. +++.++.... ..+++++++||+.+++
T Consensus 147 ----------------------------~~------------~y~~sk~a~~~~~~~~~~~~~-~~~i~v~~i~pg~v~~ 185 (255)
T TIGR01963 147 ----------------------------KS------------AYVAAKHGLIGLTKVLALEVA-AHGITVNAICPGYVRT 185 (255)
T ss_pred ----------------------------Cc------------hhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccc
Confidence 00 1222222 2233322221 2489999999999988
Q ss_pred cccC-CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 327 TCKE-PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 327 ~~~~-p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+... .++.-... ... . ................++++++|+|++++.++..... ...+++|++.++
T Consensus 186 ~~~~~~~~~~~~~----~~~-~--~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~--~~~g~~~~~~~g 251 (255)
T TIGR01963 186 PLVEKQIADQAKT----RGI-P--EEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAA--GITGQAIVLDGG 251 (255)
T ss_pred HHHHHHHHhhhcc----cCC-C--chHHHHHHHHccCccccCcCHHHHHHHHHHHcCcccc--CccceEEEEcCc
Confidence 6421 11110000 000 0 0000000001122346799999999999988765321 123578999876
No 77
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.62 E-value=1.1e-14 Score=142.21 Aligned_cols=218 Identities=15% Similarity=0.131 Sum_probs=136.5
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++|+||||||++|++|+++|++++++| +...++. ..+.+...... ...++..+.+|++++ +.+
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~v 71 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADV--VVHYRSDEEAAEELVEAVEA-----LGRRAQAVQADVTDK------AAL 71 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeE--EEEeCCCHHHHHHHHHHHHh-----cCCceEEEECCcCCH------HHH
Confidence 46799999999999999999999988754 2222221 11222221111 235688999999987 665
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHH----HcCCCceEEEEeeceecccc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAK----QCNKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~----~~~~~k~~v~vST~~v~~~~ 248 (554)
..+.+ ++|+|||+|+.... .+.+....++|+.++.++++.+. + .+.++|+++||...+...
T Consensus 72 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~i~~SS~~~~~~~ 150 (249)
T PRK12825 72 EAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRK-QRGGRIVNISSVAGLPGW 150 (249)
T ss_pred HHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCEEEEECccccCCCC
Confidence 55543 68999999996432 34567889999999999998873 3 357899999998765331
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIE 325 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~ 325 (554)
. .. . .|..+|...+.+++... ...+++++++||+.++
T Consensus 151 ~----------------------------~~------~------~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~ 190 (249)
T PRK12825 151 P----------------------------GR------S------NYAAAKAGLVGLTKALARELAEYGITVNMVAPGDID 190 (249)
T ss_pred C----------------------------Cc------h------HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCcc
Confidence 1 00 0 12222322333333221 2358999999999999
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
++...+.. .. ... . ..+.. ....+++++|+++++..++.... ....+++|+++++
T Consensus 191 ~~~~~~~~---~~------~~~--~--~~~~~-----~~~~~~~~~dva~~~~~~~~~~~--~~~~g~~~~i~~g 245 (249)
T PRK12825 191 TDMKEATI---EE------ARE--A--KDAET-----PLGRSGTPEDIARAVAFLCSDAS--DYITGQVIEVTGG 245 (249)
T ss_pred CCcccccc---ch------hHH--h--hhccC-----CCCCCcCHHHHHHHHHHHhCccc--cCcCCCEEEeCCC
Confidence 86542211 00 000 0 00000 11238899999999988775432 1234689999886
No 78
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.60 E-value=2.1e-14 Score=141.33 Aligned_cols=232 Identities=14% Similarity=0.089 Sum_probs=134.4
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++|+||||||++|++++++|++.+. +|+++++. ..+.+...... ...++..+.+|++++ ++.
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~~ 68 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA---KVVIADLNDEAAAAAAEALQK-----AGGKAIGVAMDVTDE------EAI 68 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCH------HHH
Confidence 468999999999999999999999876 45554432 11222211110 235788899999988 666
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeeceecccc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v~~~~ 248 (554)
+.+.+ .+|+|||+|+.... .+.++..+++|+.|+..+++.+ ++ .+.++||++||.......
T Consensus 69 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~iss~~~~~~~ 147 (258)
T PRK12429 69 NAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKA-QGGGRIINMASVHGLVGS 147 (258)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh-cCCeEEEEEcchhhccCC
Confidence 55544 68999999986543 2356678889999955555444 44 367899999997554321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
.+ ...+...+... ..+++.++++. ...++.+.++||+.+.++.
T Consensus 148 ~~----------------------------~~~y~~~k~a~--------~~~~~~l~~~~-~~~~i~v~~~~pg~v~~~~ 190 (258)
T PRK12429 148 AG----------------------------KAAYVSAKHGL--------IGLTKVVALEG-ATHGVTVNAICPGYVDTPL 190 (258)
T ss_pred CC----------------------------cchhHHHHHHH--------HHHHHHHHHHh-cccCeEEEEEecCCCcchh
Confidence 10 00011111100 12334444333 2347999999999998754
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..+. .......... . . ...............++++++|+++++..++..... ...+++|++.++
T Consensus 191 ~~~~---~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~--~~~g~~~~~~~g 254 (258)
T PRK12429 191 VRKQ---IPDLAKERGI-S-E-EEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAK--GVTGQAWVVDGG 254 (258)
T ss_pred hhhh---hhhhccccCC-C-h-HHHHHHHHhccCCccccCCHHHHHHHHHHHcCcccc--CccCCeEEeCCC
Confidence 3211 1100000000 0 0 000000001112235799999999998887754321 123578888765
No 79
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.59 E-value=4.4e-14 Score=138.43 Aligned_cols=221 Identities=12% Similarity=0.103 Sum_probs=136.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||++|++++++|+++++ +|+++.+.. .......... ...++.++.+|++++ +.
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~------~~ 69 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGA---EVIVVDICGDDAAATAELVEA-----AGGKARARQVDVRDR------AA 69 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCeEEEEECCCCCH------HH
Confidence 3578999999999999999999999876 455554321 1111111110 123588899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
++.+.+ .+|+|||+|+.... .+.+....+.|+.++.++++.+... .+.++|+++||.......
T Consensus 70 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~ 149 (251)
T PRK12826 70 LKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG 149 (251)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC
Confidence 666554 68999999988653 3467788999999999999987421 356789999997554110
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIE 325 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~ 325 (554)
. +... .|..+|...+.+.+.+. ...+++++++||+.++
T Consensus 150 ~---------------------------~~~~------------~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~ 190 (251)
T PRK12826 150 Y---------------------------PGLA------------HYAASKAGLVGFTRALALELAARNITVNSVHPGGVD 190 (251)
T ss_pred C---------------------------CCcc------------HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCC
Confidence 0 0000 12222333333333221 2348999999999998
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
++...+..... . .. .... ..+ ...+++++|+++++..++..... .-.+++|++.++
T Consensus 191 ~~~~~~~~~~~----~-~~---~~~~-~~~--------~~~~~~~~dva~~~~~l~~~~~~--~~~g~~~~~~~g 246 (251)
T PRK12826 191 TPMAGNLGDAQ----W-AE---AIAA-AIP--------LGRLGEPEDIAAAVLFLASDEAR--YITGQTLPVDGG 246 (251)
T ss_pred cchhhhcCchH----H-HH---HHHh-cCC--------CCCCcCHHHHHHHHHHHhCcccc--CcCCcEEEECCC
Confidence 86432211100 0 00 0000 011 01478899999999886643221 124689999876
No 80
>PRK09135 pteridine reductase; Provisional
Probab=99.59 E-value=2.7e-14 Score=139.77 Aligned_cols=219 Identities=11% Similarity=0.109 Sum_probs=129.1
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
++++||||||+||||++++++|++.+. +|+++.+.. .+.+..... ......+..+.+|+++. +.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~------~~ 71 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY---RVAIHYHRSAAEADALAAELN----ALRPGSAAALQADLLDP------DA 71 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHHHHHHHHHHHH----hhcCCceEEEEcCCCCH------HH
Confidence 457899999999999999999998775 455554321 112221111 11123578899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCC-------chhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceeccccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTT-------FDERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~~~~ 249 (554)
...+.+ .+|+|||+|+... ..+.++..+++|+.|+.++++.+... ..-..++++|+. .+.
T Consensus 72 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~--~~~-- 147 (249)
T PRK09135 72 LPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDI--HAE-- 147 (249)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeCh--hhc--
Confidence 665554 5899999999632 12457788999999999999999642 112234444331 111
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhc--CCCcEEEEccceeeec
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLER--GDIPVVIIRPSVIEST 327 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~--~glp~~I~Rp~~V~g~ 327 (554)
.++ ++.. .|..+|...+.++..+... .+++++++||+.++++
T Consensus 148 -----~~~-------------------~~~~------------~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~ 191 (249)
T PRK09135 148 -----RPL-------------------KGYP------------VYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWP 191 (249)
T ss_pred -----CCC-------------------CCch------------hHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCc
Confidence 000 1111 2334444555554443321 3699999999999987
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...+ .+ . ...........+ ..-+.+++|+++++..++.... ...+.+||++++
T Consensus 192 ~~~~--~~-~------~~~~~~~~~~~~--------~~~~~~~~d~a~~~~~~~~~~~---~~~g~~~~i~~g 244 (249)
T PRK09135 192 EDGN--SF-D------EEARQAILARTP--------LKRIGTPEDIAEAVRFLLADAS---FITGQILAVDGG 244 (249)
T ss_pred cccc--cC-C------HHHHHHHHhcCC--------cCCCcCHHHHHHHHHHHcCccc---cccCcEEEECCC
Confidence 6421 11 0 000000000000 1122358999999866554321 224689999987
No 81
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.58 E-value=4.1e-14 Score=139.09 Aligned_cols=223 Identities=14% Similarity=0.128 Sum_probs=134.1
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++|+||||||+||+++++.|++.|..| +.+..+. .+.+.+.... . .....++..+.+|++++ +++..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v--~i~~~r~-~~~~~~~~~~-~-~~~~~~~~~~~~D~~d~------~~i~~ 73 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALV--AIHYGRN-KQAADETIRE-I-ESNGGKAFLIEADLNSI------DGVKK 73 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEE--EEEcCCC-HHHHHHHHHH-H-HhcCCcEEEEEcCcCCH------HHHHH
Confidence 46899999999999999999999988643 2222221 1222111100 0 00124688899999988 66555
Q ss_pred Hhc-------------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceeccc
Q 042694 189 IAK-------------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 189 l~~-------------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~ 247 (554)
+.+ ++|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..++|++||..++..
T Consensus 74 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~ 153 (254)
T PRK12746 74 LVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG 153 (254)
T ss_pred HHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC
Confidence 443 58999999986432 2345778889999999999998752 23458999999866543
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEcccee
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVI 324 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V 324 (554)
..+ .. .|..+|...+.+.+... ...++++++++||.+
T Consensus 154 ~~~----------------------------~~------------~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~ 193 (254)
T PRK12746 154 FTG----------------------------SI------------AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYT 193 (254)
T ss_pred CCC----------------------------Cc------------chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCc
Confidence 210 00 23333433333333222 235899999999998
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.++..... ... +.+.....+ ....-.+++++|+++++..++..... ...+++|++.++
T Consensus 194 ~t~~~~~~---~~~-----~~~~~~~~~--------~~~~~~~~~~~dva~~~~~l~~~~~~--~~~g~~~~i~~~ 251 (254)
T PRK12746 194 KTDINAKL---LDD-----PEIRNFATN--------SSVFGRIGQVEDIADAVAFLASSDSR--WVTGQIIDVSGG 251 (254)
T ss_pred cCcchhhh---ccC-----hhHHHHHHh--------cCCcCCCCCHHHHHHHHHHHcCcccC--CcCCCEEEeCCC
Confidence 76533211 000 000000000 01113567899999998876654321 123578998765
No 82
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.58 E-value=2e-13 Score=135.93 Aligned_cols=235 Identities=13% Similarity=0.067 Sum_probs=140.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+++||||+|+||++++++|++.|.+ |++.+.. ..+.+.+.... ...++.++.+|++++ ++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~---Vv~~~r~~~~l~~~~~~l~~-----~~~~~~~~~~Dv~d~------~~ 69 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGAR---VVLGDVDKPGLRQAVNHLRA-----EGFDVHGVMCDVRHR------EE 69 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHHHh-----cCCeEEEEeCCCCCH------HH
Confidence 56889999999999999999999998764 4444432 12222211110 123678899999988 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH----cCCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ----CNKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~----~~~~k~~v~vST~~v~~~ 247 (554)
+..+.+ .+|+|||+|+.... .+.++..+++|+.|+.++++.+.. .+...++|++||...+..
T Consensus 70 v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~ 149 (275)
T PRK05876 70 VTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP 149 (275)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC
Confidence 665554 58999999996432 245778899999999999988753 111458999999765432
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEccce
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPSV 323 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~~ 323 (554)
. +... .|..+|. +++.++.+.. ..|+.+++++|+.
T Consensus 150 ~----------------------------~~~~------------~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~ 188 (275)
T PRK05876 150 N----------------------------AGLG------------AYGVAKYGVVGLAETLAREVT-ADGIGVSVLCPMV 188 (275)
T ss_pred C----------------------------CCCc------------hHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCc
Confidence 1 1111 1222332 4555554443 3489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVN 403 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~ 403 (554)
|.++........ . . ...+........+......+++++++||++++.++... +.|.+.+
T Consensus 189 v~t~~~~~~~~~-~------~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~--------~~~~~~~---- 247 (275)
T PRK05876 189 VETNLVANSERI-R------G--AACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN--------RLYVLPH---- 247 (275)
T ss_pred cccccccchhhh-c------C--ccccccccccccccccccccCCCHHHHHHHHHHHHHcC--------CeEEecC----
Confidence 866432110000 0 0 00000000001122223457899999999999887541 3454442
Q ss_pred cccHHHHHHHHHhHh
Q 042694 404 PLVFQDLARLLHEHY 418 (554)
Q Consensus 404 ~it~~e~~~~~~~~~ 418 (554)
+..+.++.+...+..
T Consensus 248 ~~~~~~~~~~~~~~~ 262 (275)
T PRK05876 248 AASRASIRRRFERID 262 (275)
T ss_pred hhhHHHHHHHHHHHH
Confidence 345555555544443
No 83
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.57 E-value=6.3e-14 Score=138.11 Aligned_cols=227 Identities=14% Similarity=0.171 Sum_probs=138.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+++|+||||||+||.++++.|++.|. +|+++++.. .+.+.+. ...++..+.+|++++ ++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~------~~ 66 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGA---RVVIADIKPARARLAALE--------IGPAAIAVSLDVTRQ------DS 66 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEcCCHHHHHHHHHH--------hCCceEEEEccCCCH------HH
Confidence 4578999999999999999999999876 556655432 2222221 123578899999988 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc--C--CCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC--N--KLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~--~~k~~v~vST~~v~~~ 247 (554)
.+.+++ .+|++||+|+.... .+.++..+++|+.++..+++++... . .-.++|++||......
T Consensus 67 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 146 (257)
T PRK07067 67 IDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG 146 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC
Confidence 655554 68999999997542 2567888999999999999998642 1 1247999999633211
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEcccee
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVI 324 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V 324 (554)
. +... .|..+|...+.+++.+. ...|+++.++|||.|
T Consensus 147 ~----------------------------~~~~------------~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v 186 (257)
T PRK07067 147 E----------------------------ALVS------------HYCATKAAVISYTQSAALALIRHGINVNAIAPGVV 186 (257)
T ss_pred C----------------------------CCCc------------hhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcc
Confidence 0 0000 23334433333333222 135899999999999
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.++..+.......... . ...+.......+......+.+++|++++++.++..... ...+.+|++.++
T Consensus 187 ~t~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~--~~~g~~~~v~gg 253 (257)
T PRK07067 187 DTPMWDQVDALFARYE---N----RPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADAD--YIVAQTYNVDGG 253 (257)
T ss_pred cchhhhhhhhhhhhcc---C----CCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccc--cccCcEEeecCC
Confidence 8753221100000000 0 00000000001111235688999999999888764321 123589999877
No 84
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.56 E-value=4.8e-14 Score=140.78 Aligned_cols=231 Identities=14% Similarity=0.061 Sum_probs=132.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++|+||||||++|+.++++|++++. +|+++.+. ..+.+.+.... .....+++.+.+|++++ ++.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~d~------~~~ 69 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY---LVIATMRNPEKQENLLSQATQ---LNLQQNIKVQQLDVTDQ------NSI 69 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC---EEEEEeCCHHHHHHHHHHHHh---cCCCCceeEEecCCCCH------HHH
Confidence 467899999999999999999999876 45554332 22222221111 00124788999999988 554
Q ss_pred HH---Hh---cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 187 DV---IA---KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 187 ~~---l~---~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
+. +. ..+|+|||+|+.... .+.++...++|+.|+.++++.+... .+..++|++||........
T Consensus 70 ~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~- 148 (280)
T PRK06914 70 HNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFP- 148 (280)
T ss_pred HHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCC-
Confidence 43 21 368999999986442 2466778899999999988886321 3567899999864432211
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeec
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~ 327 (554)
... .|..+|...+.+++... ...|++++++|||.+.++
T Consensus 149 ---------------------------~~~------------~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 189 (280)
T PRK06914 149 ---------------------------GLS------------PYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTN 189 (280)
T ss_pred ---------------------------CCc------------hhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccc
Confidence 000 23333444344433322 234899999999999765
Q ss_pred ccCCccccccC-CCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEG-NRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~-~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..+........ .....+. .....+..... ......+++++|+|++++.++..... ...|+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~dva~~~~~~~~~~~~-----~~~~~~~~~ 254 (280)
T PRK06914 190 IWEVGKQLAENQSETTSPY-KEYMKKIQKHI---NSGSDTFGNPIDVANLIVEIAESKRP-----KLRYPIGKG 254 (280)
T ss_pred hhhccccccccccccccch-HHHHHHHHHHH---hhhhhccCCHHHHHHHHHHHHcCCCC-----CcccccCCc
Confidence 32211100000 0000000 00000000000 01123578899999999998765322 246887765
No 85
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.7e-13 Score=134.43 Aligned_cols=217 Identities=14% Similarity=0.117 Sum_probs=134.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||+++++.|++.+. +|+++++.. ...+.+.... ...++..+.+|++++ +.
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~vi~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~ 69 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGA---SVVVADINAEGAERVAKQIVA-----DGGTAIAVQVDVSDP------DS 69 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCH------HH
Confidence 3578999999999999999999999875 566665431 1222221110 123567889999987 55
Q ss_pred HHHHhc-------CccEEEEcCCCCC------c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTT------F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~------~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
.+.+.+ .+|+|||+|+... + .+.++..+++|+.|+.++++++... .+.++++++||..++
T Consensus 70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 149 (250)
T PRK07774 70 AKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW 149 (250)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc
Confidence 554443 6899999999642 1 2456678899999999999998753 134689999997664
Q ss_pred ccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccc
Q 042694 246 GQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPS 322 (554)
Q Consensus 246 ~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~ 322 (554)
.... .|..+|...+.+++... ...++++.+++||
T Consensus 150 ~~~~-------------------------------------------~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg 186 (250)
T PRK07774 150 LYSN-------------------------------------------FYGLAKVGLNGLTQQLARELGGMNIRVNAIAPG 186 (250)
T ss_pred CCcc-------------------------------------------ccHHHHHHHHHHHHHHHHHhCccCeEEEEEecC
Confidence 3210 23334444444443332 1247999999998
Q ss_pred eeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 323 VIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 323 ~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.+..+.... +.. .........+ ++ ..-+..+++++++++.++..... ...+++|++.++
T Consensus 187 ~~~t~~~~~---~~~-----~~~~~~~~~~-~~--------~~~~~~~~d~a~~~~~~~~~~~~--~~~g~~~~v~~g 245 (250)
T PRK07774 187 PIDTEATRT---VTP-----KEFVADMVKG-IP--------LSRMGTPEDLVGMCLFLLSDEAS--WITGQIFNVDGG 245 (250)
T ss_pred cccCccccc---cCC-----HHHHHHHHhc-CC--------CCCCcCHHHHHHHHHHHhChhhh--CcCCCEEEECCC
Confidence 885533211 100 0000000000 10 01245678999999887754321 123579999887
No 86
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.55 E-value=2.9e-14 Score=134.60 Aligned_cols=258 Identities=19% Similarity=0.127 Sum_probs=164.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-hhHHH--HHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-ELFKC--LKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~~~~~--l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+|+.||||-||+-|++|.+.||+.|+.|.-++--.+ ....+ |.+. +.....++..+.|||++. ..+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~-----~~~~~~~l~l~~gDLtD~------~~l 70 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYED-----PHLNDPRLHLHYGDLTDS------SNL 70 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccc-----cccCCceeEEEeccccch------HHH
Confidence 578999999999999999999999987644432211 11112 2111 111334689999999998 666
Q ss_pred HHHhc--CccEEEEcCCC----CCchhhHHHHHHHhchHHHHHHHHHHHcCC-CceEEEEeeceecccccceeeccccCC
Q 042694 187 DVIAK--EVDVIVNSAAN----TTFDERYDIAIDINTRGPCRLMEFAKQCNK-LKLFVQVSTAYVNGQRRGKVMEKPFCM 259 (554)
Q Consensus 187 ~~l~~--~vdiViH~AA~----v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~-~k~~v~vST~~v~~~~~~~i~E~~~~~ 259 (554)
..+.+ ++|-|+|+||. ++|+. +....+++..||.+||++.+.... -.+|...||.-.||... |.|-.+
T Consensus 71 ~r~l~~v~PdEIYNLaAQS~V~vSFe~-P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~----~~pq~E 145 (345)
T COG1089 71 LRILEEVQPDEIYNLAAQSHVGVSFEQ-PEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQ----EIPQKE 145 (345)
T ss_pred HHHHHhcCchhheeccccccccccccC-cceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcc----cCcccc
Confidence 66665 79999999997 34544 445678899999999999998643 35899999999988642 333333
Q ss_pred CCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCC
Q 042694 260 GDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGN 339 (554)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~ 339 (554)
..++.|. .+++..+.|. +|.+ -...+..|+-+| -|+.+- .+.|.-|-.--.
T Consensus 146 ~TPFyPr-------------SPYAvAKlYa--------~W~t----vNYResYgl~Ac---nGILFN-HESP~Rge~FVT 196 (345)
T COG1089 146 TTPFYPR-------------SPYAVAKLYA--------YWIT----VNYRESYGLFAC---NGILFN-HESPLRGETFVT 196 (345)
T ss_pred CCCCCCC-------------CHHHHHHHHH--------Hhee----eehHhhcCceee---cceeec-CCCCCCccceeh
Confidence 3333222 1122222111 1222 222334455554 344443 444543322111
Q ss_pred CCccceeeeeccceee-eeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHh
Q 042694 340 RMMDPIILYYGKGQLT-GFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHY 418 (554)
Q Consensus 340 ~~~~~i~~~~~~G~~~-~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~ 418 (554)
+.....+..+..|... -..++.++.+||-+..|-++++...+... .+..|.++++ ...|.+|++++..+..
T Consensus 197 RKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~------~PddyViATg--~t~sVrefv~~Af~~~ 268 (345)
T COG1089 197 RKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQE------EPDDYVIATG--ETHSVREFVELAFEMV 268 (345)
T ss_pred HHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccC------CCCceEEecC--ceeeHHHHHHHHHHHc
Confidence 1111112223345432 34688999999999999999988876543 2478999999 6779999999999988
Q ss_pred cc
Q 042694 419 SA 420 (554)
Q Consensus 419 ~~ 420 (554)
|.
T Consensus 269 g~ 270 (345)
T COG1089 269 GI 270 (345)
T ss_pred Cc
Confidence 84
No 87
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.54 E-value=3.8e-13 Score=134.01 Aligned_cols=240 Identities=13% Similarity=0.164 Sum_probs=145.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||+++++.|++.|. +|+++.+. ..+.+.+..... ....++..+.+|++++ +.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~Dl~~~------~~ 72 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA---AVMIVGRNPDKLAAAAEEIEAL---KGAGAVRYEPADVTDE------DQ 72 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHhc---cCCCceEEEEcCCCCH------HH
Confidence 4578999999999999999999999876 45555432 122222211110 0124788899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
...+.+ .+|+|||+|+.... .+.+....++|+.|+..+++.+.+. .+..+++++||..+...
T Consensus 73 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~ 152 (276)
T PRK05875 73 VARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT 152 (276)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC
Confidence 655554 68999999985421 2346778899999999999877542 12358999999765332
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEcccee
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVI 324 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V 324 (554)
.. ... .|..+|...+.+++.+. ...+++++++||+.+
T Consensus 153 ~~----------------------------~~~------------~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v 192 (276)
T PRK05875 153 HR----------------------------WFG------------AYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLI 192 (276)
T ss_pred CC----------------------------CCc------------chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcc
Confidence 10 011 23333444444443332 234799999999988
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCc
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNP 404 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~ 404 (554)
.++.... .... ..... .... ......++.++|+++++..++..... ...+++|+++++ ..
T Consensus 193 ~t~~~~~---~~~~----~~~~~----~~~~-----~~~~~~~~~~~dva~~~~~l~~~~~~--~~~g~~~~~~~g--~~ 252 (276)
T PRK05875 193 RTDLVAP---ITES----PELSA----DYRA-----CTPLPRVGEVEDVANLAMFLLSDAAS--WITGQVINVDGG--HM 252 (276)
T ss_pred CCccccc---cccC----HHHHH----HHHc-----CCCCCCCcCHHHHHHHHHHHcCchhc--CcCCCEEEECCC--ee
Confidence 5532211 0000 00000 0000 00112356799999999988754321 123579999887 33
Q ss_pred c----cHHHHHHHHHhHhc
Q 042694 405 L----VFQDLARLLHEHYS 419 (554)
Q Consensus 405 i----t~~e~~~~~~~~~~ 419 (554)
+ +..|+++.+....+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 253 LRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred ccCCccHHHHHHHHhhHHH
Confidence 3 77777777665544
No 88
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.54 E-value=1.5e-13 Score=133.46 Aligned_cols=227 Identities=17% Similarity=0.135 Sum_probs=140.3
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcC
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKE 192 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~ 192 (554)
|+||||||.+|+.+++.|++.+..| ++.+ +...-+...+. ....++++.+|+.++ +.+...+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V-~~l~-R~~~~~~~~~l--------~~~g~~vv~~d~~~~------~~l~~al~g 64 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSV-RALV-RDPSSDRAQQL--------QALGAEVVEADYDDP------ESLVAALKG 64 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCE-EEEE-SSSHHHHHHHH--------HHTTTEEEES-TT-H------HHHHHHHTT
T ss_pred CEEECCccHHHHHHHHHHHhCCCCc-EEEE-eccchhhhhhh--------hcccceEeecccCCH------HHHHHHHcC
Confidence 7999999999999999999966654 3332 32211121111 113456789999987 899999999
Q ss_pred ccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccccccc
Q 042694 193 VDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNS 272 (554)
Q Consensus 193 vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~ 272 (554)
+|+||.+-+..+ .. -+....+++++|++. ++++||+.|....+....+ .
T Consensus 65 ~d~v~~~~~~~~-~~--------~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~~~-----~---------------- 113 (233)
T PF05368_consen 65 VDAVFSVTPPSH-PS--------ELEQQKNLIDAAKAA-GVKHFVPSSFGADYDESSG-----S---------------- 113 (233)
T ss_dssp CSEEEEESSCSC-CC--------HHHHHHHHHHHHHHH-T-SEEEESEESSGTTTTTT-----S----------------
T ss_pred CceEEeecCcch-hh--------hhhhhhhHHHhhhcc-ccceEEEEEeccccccccc-----c----------------
Confidence 999999887654 11 123467899999995 7999997554333221100 0
Q ss_pred cCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeeccc
Q 042694 273 RRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKG 352 (554)
Q Consensus 273 ~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G 352 (554)
.|. .. .+-.|...|..++..+++++++|||..+...-.++..+.+. . ...
T Consensus 114 ---~p~-------~~----------~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~~~~~-~---------~~~ 163 (233)
T PF05368_consen 114 ---EPE-------IP----------HFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAPVVDI-K---------KSK 163 (233)
T ss_dssp ---TTH-------HH----------HHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHHTTCS-C---------CTS
T ss_pred ---ccc-------ch----------hhhhhhhhhhhhhhccccceeccccchhhhhhhhhcccccc-c---------ccc
Confidence 000 00 11223344554445699999999999876443332222111 0 001
Q ss_pred eeeeeecCCCccccc-chhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 353 QLTGFLVDPNGILDV-VPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 353 ~~~~~~~~~~~~~d~-vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
..-.++.+.+....+ +..+|+++++..++..+... ..++.+.+++. .+|+.|+++.+.+..|+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~--~~~~~~~~~~~---~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 164 DVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKH--NNGKTIFLAGE---TLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp SEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGT--TEEEEEEEGGG---EEEHHHHHHHHHHHHTSE
T ss_pred eEEEEccCCCccccccccHHHHHHHHHHHHcChHHh--cCCEEEEeCCC---CCCHHHHHHHHHHHHCCc
Confidence 011233455544555 49999999999888775432 13578888764 789999999999999974
No 89
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.53 E-value=1.9e-13 Score=136.05 Aligned_cols=223 Identities=13% Similarity=0.114 Sum_probs=133.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++|+||||+|+||++++++|++.|. +|++..+.. +++.+.... . .....++..+.+|++++ +...
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~---~V~~~~r~~-~~~~~~~~~-~-~~~~~~~~~~~~Dl~~~------~~~~ 75 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGF---PVALGARRV-EKCEELVDK-I-RADGGEAVAFPLDVTDP------DSVK 75 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHHH-H-HhcCCeEEEEECCCCCH------HHHH
Confidence 3467999999999999999999998875 344443221 122211100 0 00124678889999987 6665
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+ .+|+|||+|+.... .+.++...++|+.|+.++++.+... .+..+||++||...+....
T Consensus 76 ~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~- 154 (274)
T PRK07775 76 SFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP- 154 (274)
T ss_pred HHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-
Confidence 5544 68999999997532 2456777899999999999887531 2345799999975544311
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeec
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~ 327 (554)
... .|..+|...+.+++... ...|++++++|||.+...
T Consensus 155 ---------------------------~~~------------~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~ 195 (274)
T PRK07775 155 ---------------------------HMG------------AYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG 195 (274)
T ss_pred ---------------------------Ccc------------hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence 000 23334444444444332 124899999999887443
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIAS 399 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~ 399 (554)
...... .. .....+. . .... .......++++||+|++++.++.... ...+||+.-
T Consensus 196 ~~~~~~---~~--~~~~~~~---~--~~~~--~~~~~~~~~~~~dva~a~~~~~~~~~-----~~~~~~~~~ 250 (274)
T PRK07775 196 MGWSLP---AE--VIGPMLE---D--WAKW--GQARHDYFLRASDLARAITFVAETPR-----GAHVVNMEV 250 (274)
T ss_pred ccccCC---hh--hhhHHHH---H--HHHh--cccccccccCHHHHHHHHHHHhcCCC-----CCCeeEEee
Confidence 211000 00 0001000 0 0000 01112468999999999998876421 245788764
No 90
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.8e-13 Score=133.86 Aligned_cols=228 Identities=11% Similarity=0.096 Sum_probs=133.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++||||||+|++|++++++|++.+++ |+++.+. ..+.+.+..+ ..++..+.+|++++ +.
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~---V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~D~~~~------~~ 72 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGAR---VHVCDVSEAALAATAARLP-------GAKVTATVADVADP------AQ 72 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHHh-------cCceEEEEccCCCH------HH
Confidence 56789999999999999999999998764 5555432 2222222221 12678899999987 55
Q ss_pred HHHHh-------cCccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCC-ceEEEEeeceecc
Q 042694 186 ADVIA-------KEVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKL-KLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~-------~~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~-k~~v~vST~~v~~ 246 (554)
+..+. .++|+|||+|+.... .+.++..+++|+.|+..+++.+... .+. +.++++||.+...
T Consensus 73 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~ 152 (264)
T PRK12829 73 VERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL 152 (264)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc
Confidence 55444 378999999997611 2456788999999999999887421 233 5688887754321
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccce
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSV 323 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~ 323 (554)
.. +... .|..+|...+.+++... ...+++++++|||.
T Consensus 153 ~~----------------------------~~~~------------~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~ 192 (264)
T PRK12829 153 GY----------------------------PGRT------------PYAASKWAVVGLVKSLAIELGPLGIRVNAILPGI 192 (264)
T ss_pred CC----------------------------CCCc------------hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCC
Confidence 11 0000 12222222222222221 23489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
++++............... + ......+..... ....+++++|+++++..++..... ...+++|+++++
T Consensus 193 v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~-----~~~~~~~~~d~a~~~~~l~~~~~~--~~~g~~~~i~~g 260 (264)
T PRK12829 193 VRGPRMRRVIEARAQQLGI-G-LDEMEQEYLEKI-----SLGRMVEPEDIAATALFLASPAAR--YITGQAISVDGN 260 (264)
T ss_pred cCChHHHHHhhhhhhccCC-C-hhHHHHHHHhcC-----CCCCCCCHHHHHHHHHHHcCcccc--CccCcEEEeCCC
Confidence 9886543211100000000 0 000000011100 123589999999998877643211 123578999886
No 91
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.53 E-value=3.1e-13 Score=133.02 Aligned_cols=221 Identities=16% Similarity=0.123 Sum_probs=133.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
.|+|+||||||+||++++++|++.+. +|+++++..-+.+.+.... . .....++.++.+|++++ ++...+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~---~vi~~~r~~~~~~~~~~~~-~-~~~~~~~~~~~~D~~~~------~~~~~~ 70 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGF---DLAINDRPDDEELAATQQE-L-RALGVEVIFFPADVADL------SAHEAM 70 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecCchhHHHHHHHH-H-HhcCCceEEEEecCCCH------HHHHHH
Confidence 36899999999999999999999875 4555543211111111000 0 00234788999999987 655554
Q ss_pred hc-------CccEEEEcCCCCCc---------hhhHHHHHHHhchHHHHHHHHHHHc----CC-----CceEEEEeecee
Q 042694 190 AK-------EVDVIVNSAANTTF---------DERYDIAIDINTRGPCRLMEFAKQC----NK-----LKLFVQVSTAYV 244 (554)
Q Consensus 190 ~~-------~vdiViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~la~~~----~~-----~k~~v~vST~~v 244 (554)
.+ .+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+ ..+++++||...
T Consensus 71 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 150 (256)
T PRK12745 71 LDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNA 150 (256)
T ss_pred HHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhh
Confidence 43 68999999986431 2567888999999999998887542 11 467999999765
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEcc
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRP 321 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp 321 (554)
.....+ .. .|..+|...+.+++... ...|++++++||
T Consensus 151 ~~~~~~----------------------------~~------------~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~p 190 (256)
T PRK12745 151 IMVSPN----------------------------RG------------EYCISKAGLSMAAQLFAARLAEEGIGVYEVRP 190 (256)
T ss_pred ccCCCC----------------------------Cc------------ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEec
Confidence 432110 00 23333333333333222 135899999999
Q ss_pred ceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 322 SVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 322 ~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|.+.++...+ +.+.. ... ...+..+ ...+.+++++++++..++.... ....+.+|++.++
T Consensus 191 g~v~t~~~~~---~~~~~---~~~---~~~~~~~--------~~~~~~~~d~a~~i~~l~~~~~--~~~~G~~~~i~gg 250 (256)
T PRK12745 191 GLIKTDMTAP---VTAKY---DAL---IAKGLVP--------MPRWGEPEDVARAVAALASGDL--PYSTGQAIHVDGG 250 (256)
T ss_pred CCCcCccccc---cchhH---Hhh---hhhcCCC--------cCCCcCHHHHHHHHHHHhCCcc--cccCCCEEEECCC
Confidence 9987754321 11110 000 0011111 1346688999998887764321 1123679999876
No 92
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.53 E-value=1.4e-13 Score=134.65 Aligned_cols=220 Identities=13% Similarity=0.079 Sum_probs=134.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++++||||||+||+++++.|++.+.. +++.....-+.+.+.... . .....++.++.+|++++ +...
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~---v~~~~~~~~~~~~~~~~~-l-~~~~~~~~~~~~D~~~~------~~~~ 72 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAK---VVINYNSSKEAAENLVNE-L-GKEGHDVYAVQADVSKV------EDAN 72 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCE---EEEEcCCcHHHHHHHHHH-H-HhcCCeEEEEECCCCCH------HHHH
Confidence 35789999999999999999999988764 444322111122111100 0 00124688999999987 6655
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+ .+|+|||+|+.... .+.+++.+++|+.++..+++.+... .+..++|++||.+......
T Consensus 73 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~- 151 (247)
T PRK12935 73 RLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGF- 151 (247)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCC-
Confidence 5554 48999999997542 2567888999999999999998742 2346899999965432210
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
... .|..+|. +++.++.+.. ..++++++++||.|.+
T Consensus 152 ---------------------------~~~------------~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t 191 (247)
T PRK12935 152 ---------------------------GQT------------NYSAAKAGMLGFTKSLALELA-KTNVTVNAICPGFIDT 191 (247)
T ss_pred ---------------------------CCc------------chHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEeCCCcC
Confidence 000 2223333 2333333222 3489999999999865
Q ss_pred cccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 327 TCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 327 ~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+.....+. ........ .....++.+++|++++++.++.... -..+++||+.++
T Consensus 192 ~~~~~~~~---------~~~~~~~~---------~~~~~~~~~~edva~~~~~~~~~~~---~~~g~~~~i~~g 244 (247)
T PRK12935 192 EMVAEVPE---------EVRQKIVA---------KIPKKRFGQADEIAKGVVYLCRDGA---YITGQQLNINGG 244 (247)
T ss_pred hhhhhccH---------HHHHHHHH---------hCCCCCCcCHHHHHHHHHHHcCccc---CccCCEEEeCCC
Confidence 32211110 00000000 1112467899999999988775421 123589998876
No 93
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.53 E-value=1.9e-13 Score=133.93 Aligned_cols=222 Identities=13% Similarity=0.102 Sum_probs=133.2
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.+++|+||||||+||++++++|++.|.+| .+.+.+.. ..+.+.+... ....++..+.+|++++ ++..
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v-~~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~------~~~~ 70 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDI-AVNYARSRKAAEETAEEIE-----ALGRKALAVKANVGDV------EKIK 70 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEE-EEEcCCCHHHHHHHHHHHH-----hcCCeEEEEEcCCCCH------HHHH
Confidence 46899999999999999999999987654 11112221 1111111111 0234688899999988 6665
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+++ .+|+|||+|+.... .+.+...+.+|+.|+..+++.+... .+.++||++||........
T Consensus 71 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~- 149 (250)
T PRK08063 71 EMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLE- 149 (250)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC-
Confidence 5544 58999999986432 2345667889999999999888652 2345999999965432210
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeec
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~ 327 (554)
... .|..+|...+.+++... ...|+++.+++|+.+..+
T Consensus 150 ---------------------------~~~------------~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~ 190 (250)
T PRK08063 150 ---------------------------NYT------------TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTD 190 (250)
T ss_pred ---------------------------Ccc------------HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCc
Confidence 000 22333444444433222 125899999999999654
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....++++. .+.... .... + ...+++.+|++++++.++..... ...++++++.++
T Consensus 191 ~~~~~~~~~-------~~~~~~-~~~~------~--~~~~~~~~dva~~~~~~~~~~~~--~~~g~~~~~~gg 245 (250)
T PRK08063 191 ALKHFPNRE-------ELLEDA-RAKT------P--AGRMVEPEDVANAVLFLCSPEAD--MIRGQTIIVDGG 245 (250)
T ss_pred hhhhccCch-------HHHHHH-hcCC------C--CCCCcCHHHHHHHHHHHcCchhc--CccCCEEEECCC
Confidence 322222210 000000 0000 1 12468899999999887754321 123578888776
No 94
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.53 E-value=6.2e-14 Score=137.31 Aligned_cols=223 Identities=10% Similarity=0.075 Sum_probs=134.0
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
++++|+|||||||||++++++|++.+.+ |+++.+. ..+.+...... ...++..+.+|++++ ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~---V~~~~r~~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~------~~ 70 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAH---VVVNYRQKAPRANKVVAEIEA-----AGGRASAVGADLTDE------ES 70 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCE---EEEEeCCchHhHHHHHHHHHh-----cCCceEEEEcCCCCH------HH
Confidence 5689999999999999999999988764 4443221 12222221111 124678899999988 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecccccceeeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRGKVMEKP 256 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~~i~E~~ 256 (554)
...+.+ .+|+|||+|+.... ...+....++|+.|+.++++.+.+. .+..++|++||........ .+ +
T Consensus 71 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~---~~-~ 146 (248)
T PRK07806 71 VAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT---VK-T 146 (248)
T ss_pred HHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc---cc-C
Confidence 655543 68999999986322 2235567889999999999999863 2235899999954321100 00 0
Q ss_pred cCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeecccCCcc
Q 042694 257 FCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIESTCKEPFS 333 (554)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~~~~p~~ 333 (554)
.+... .|..+|...+.+..... ...++++.+++|+.+-++....
T Consensus 147 -------------------~~~~~------------~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~-- 193 (248)
T PRK07806 147 -------------------MPEYE------------PVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTAT-- 193 (248)
T ss_pred -------------------Ccccc------------HHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhh--
Confidence 01000 23334444444443322 2357999999988775532110
Q ss_pred ccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 334 GWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 334 g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.... . . .+..... .....++++++|++++++.++..... .+++|+++++
T Consensus 194 -~~~~--~-~-------~~~~~~~---~~~~~~~~~~~dva~~~~~l~~~~~~----~g~~~~i~~~ 242 (248)
T PRK07806 194 -LLNR--L-N-------PGAIEAR---REAAGKLYTVSEFAAEVARAVTAPVP----SGHIEYVGGA 242 (248)
T ss_pred -hhcc--C-C-------HHHHHHH---HhhhcccCCHHHHHHHHHHHhhcccc----CccEEEecCc
Confidence 0000 0 0 0000000 00013689999999999998874322 3689999987
No 95
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.52 E-value=4.4e-13 Score=131.55 Aligned_cols=223 Identities=13% Similarity=0.086 Sum_probs=131.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++|+|||||||||++++++|++.+.+| ++..+.. .+.+...... ......++..+.+|++++ +....
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v--~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~D~~~~------~~~~~ 73 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLV--VVNAKKR-AEEMNETLKM--VKENGGEGIGVLADVSTR------EGCET 73 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEE--EEEeCCC-hHHHHHHHHH--HHHcCCeeEEEEeccCCH------HHHHH
Confidence 46899999999999999999999877643 2222221 1111111100 000123567889999987 55544
Q ss_pred Hhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecccccceee
Q 042694 189 IAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRRGKVM 253 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~~~i~ 253 (554)
+.+ .+|+|||+||.... .+.++...++|+.|+..+++.+.+. ....+||++||...+...
T Consensus 74 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----- 148 (252)
T PRK06077 74 LAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA----- 148 (252)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC-----
Confidence 443 68999999996322 2235678899999999999988753 223579999997654321
Q ss_pred ccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhh--cCCCcEEEEccceeeecccCC
Q 042694 254 EKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLE--RGDIPVVIIRPSVIESTCKEP 331 (554)
Q Consensus 254 E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~--~~glp~~I~Rp~~V~g~~~~p 331 (554)
+... .|..+|...+.+++.... ..++.+.+++||.|.++....
T Consensus 149 -----------------------~~~~------------~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~ 193 (252)
T PRK06077 149 -----------------------YGLS------------IYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGES 193 (252)
T ss_pred -----------------------CCch------------HHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHh
Confidence 1111 122223333333333221 127899999999986643221
Q ss_pred ccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 332 FSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 332 ~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
...+... . ...... +......+++++|++++++.++..... .+++|++.++
T Consensus 194 ~~~~~~~---~-------~~~~~~----~~~~~~~~~~~~dva~~~~~~~~~~~~----~g~~~~i~~g 244 (252)
T PRK06077 194 LFKVLGM---S-------EKEFAE----KFTLMGKILDPEEVAEFVAAILKIESI----TGQVFVLDSG 244 (252)
T ss_pred hhhcccc---c-------HHHHHH----hcCcCCCCCCHHHHHHHHHHHhCcccc----CCCeEEecCC
Confidence 1111000 0 000000 011123689999999999998854322 3579999887
No 96
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.52 E-value=4.4e-13 Score=131.37 Aligned_cols=227 Identities=16% Similarity=0.150 Sum_probs=133.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++||||||||++|++++++|++.+. +|++++... ...+..... ....++..+.+|++++ +..
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~---~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~d~~~~------~~~ 67 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA---KVAVFDLNREAAEKVAADIR-----AKGGNAQAFACDITDR------DSV 67 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCHHHHHHHHHHHH-----hcCCcEEEEEcCCCCH------HHH
Confidence 578999999999999999999999876 455554321 122222111 0234688899999987 666
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
+.+.+ ++|+|||+|+.... .+.++..+++|+.++.++++.+... .+.++++++||...+....
T Consensus 68 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~ 147 (250)
T TIGR03206 68 DTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS 147 (250)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC
Confidence 55543 68999999986421 2346778999999999998887521 2457899999986654321
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeeccc
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~ 329 (554)
+ ...+...+... ..+++.++..... .++++.++||+.++++..
T Consensus 148 ~----------------------------~~~Y~~sK~a~--------~~~~~~la~~~~~-~~i~v~~v~pg~~~~~~~ 190 (250)
T TIGR03206 148 G----------------------------EAVYAACKGGL--------VAFSKTMAREHAR-HGITVNVVCPGPTDTALL 190 (250)
T ss_pred C----------------------------CchHHHHHHHH--------HHHHHHHHHHHhH-hCcEEEEEecCcccchhH
Confidence 0 00111111110 0233344333222 489999999999977543
Q ss_pred CCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 330 EPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 330 ~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....++..+ ...+...+.. .. + ...+...+|+|+++..++.... ....++++++.++
T Consensus 191 ~~~~~~~~~---~~~~~~~~~~-~~------~--~~~~~~~~dva~~~~~l~~~~~--~~~~g~~~~~~~g 247 (250)
T TIGR03206 191 DDICGGAEN---PEKLREAFTR-AI------P--LGRLGQPDDLPGAILFFSSDDA--SFITGQVLSVSGG 247 (250)
T ss_pred HhhhhccCC---hHHHHHHHHh-cC------C--ccCCcCHHHHHHHHHHHcCccc--CCCcCcEEEeCCC
Confidence 221111100 0000000000 00 0 0124456899999988765432 1223578888765
No 97
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.52 E-value=2.6e-13 Score=135.40 Aligned_cols=122 Identities=13% Similarity=0.145 Sum_probs=87.4
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
.+++|+||||||+||++++++|++.|. +|+++.+.. +++..... ....++..+.+|++++ +....
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~-~~~~~l~~-----~~~~~~~~~~~D~~d~------~~~~~ 67 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH---RVVGTVRSE-AARADFEA-----LHPDRALARLLDVTDF------DAIDA 67 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC---EEEEEeCCH-HHHHHHHh-----hcCCCeeEEEccCCCH------HHHHH
Confidence 357899999999999999999999876 455554321 22221111 0234678899999987 65555
Q ss_pred Hhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH---cCCCceEEEEeeceec
Q 042694 189 IAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ---CNKLKLFVQVSTAYVN 245 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~---~~~~k~~v~vST~~v~ 245 (554)
+.+ .+|+|||+|+.... .+.++..+++|+.|+.++++.+.. ..+..++|++||....
T Consensus 68 ~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~ 141 (277)
T PRK06180 68 VVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGL 141 (277)
T ss_pred HHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEeccccc
Confidence 544 58999999997543 235677899999999999998643 1245689999997553
No 98
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.51 E-value=4.6e-13 Score=131.92 Aligned_cols=231 Identities=15% Similarity=0.151 Sum_probs=141.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++++||||||+||+.+++.|++.+. +|+++++.. .+.+.+.. ...++..+.+|+.++ +.+.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~---~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~~D~~~~------~~~~ 65 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD---RVLALDIDAAALAAFADAL-------GDARFVPVACDLTDA------ASLA 65 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHh-------cCCceEEEEecCCCH------HHHH
Confidence 56899999999999999999998775 455554321 11122111 124688899999988 6665
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~~~~~ 250 (554)
.+++ ++|+|||+|+.... .+.+.....+|+.|+..+++.+.. + .+..+++++||....... +
T Consensus 66 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~ 144 (257)
T PRK07074 66 AALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-G 144 (257)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-C
Confidence 5444 48999999987532 234566788999999999988843 1 245689999996432210 0
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeec
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~ 327 (554)
. + .|..+|...+.+++... ...|+++.++|||.+.++
T Consensus 145 ----------~---------------~---------------~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~ 184 (257)
T PRK07074 145 ----------H---------------P---------------AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQ 184 (257)
T ss_pred ----------C---------------c---------------ccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcc
Confidence 0 0 22223333333333222 124799999999998664
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccH
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVF 407 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~ 407 (554)
.... .......+. ..+. ......++++++|++++++.++..... ...+.++++.++ .....
T Consensus 185 ~~~~------~~~~~~~~~---~~~~------~~~~~~~~~~~~d~a~~~~~l~~~~~~--~~~g~~~~~~~g--~~~~~ 245 (257)
T PRK07074 185 AWEA------RVAANPQVF---EELK------KWYPLQDFATPDDVANAVLFLASPAAR--AITGVCLPVDGG--LTAGN 245 (257)
T ss_pred hhhc------ccccChHHH---HHHH------hcCCCCCCCCHHHHHHHHHHHcCchhc--CcCCcEEEeCCC--cCcCC
Confidence 3210 000000000 0000 011135789999999999998754221 123578888777 56678
Q ss_pred HHHHHHHHh
Q 042694 408 QDLARLLHE 416 (554)
Q Consensus 408 ~e~~~~~~~ 416 (554)
+|+.+.+.+
T Consensus 246 ~~~~~~~~~ 254 (257)
T PRK07074 246 REMARTLTL 254 (257)
T ss_pred hhhhhhhcc
Confidence 888887654
No 99
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.51 E-value=1.1e-12 Score=128.66 Aligned_cols=224 Identities=13% Similarity=0.133 Sum_probs=132.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++||||+|++|++|+++|++.|. +|+++.+.. .....+... ...++..+++|++++ +.
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~~~~~~~~~~~------~~~~~~~~~~D~~~~------~~ 67 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGA---RVVVADRDAEAAERVAAAIA------AGGRAFARQGDVGSA------EA 67 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC---eEEEecCCHHHHHHHHHHHh------cCCeEEEEEcCCCCH------HH
Confidence 3578999999999999999999999876 455543321 111111110 134688999999988 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ ++|+|||+|+.... .+.++..+++|+.|+.++.+.+... .+.++++++||.......
T Consensus 68 ~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~ 147 (252)
T PRK06138 68 VEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG 147 (252)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC
Confidence 655543 68999999997532 2456778999999998777665321 356799999997553321
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIE 325 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~ 325 (554)
.+ .. .|..+|...+.+++... ...+++++++||+.+.
T Consensus 148 ~~----------------------------~~------------~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~ 187 (252)
T PRK06138 148 RG----------------------------RA------------AYVASKGAIASLTRAMALDHATDGIRVNAVAPGTID 187 (252)
T ss_pred CC----------------------------cc------------HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCcc
Confidence 10 00 12222322233333222 1248999999999997
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
++.......+.... ..+.....+ ......++++++++++++.++..... ...+.++.+.++
T Consensus 188 t~~~~~~~~~~~~~----~~~~~~~~~--------~~~~~~~~~~~d~a~~~~~l~~~~~~--~~~g~~~~~~~g 248 (252)
T PRK06138 188 TPYFRRIFARHADP----EALREALRA--------RHPMNRFGTAEEVAQAALFLASDESS--FATGTTLVVDGG 248 (252)
T ss_pred CcchhhhhccccCh----HHHHHHHHh--------cCCCCCCcCHHHHHHHHHHHcCchhc--CccCCEEEECCC
Confidence 76433221111100 000000000 00112367899999999988755332 123466766554
No 100
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=2.4e-13 Score=123.99 Aligned_cols=244 Identities=10% Similarity=0.050 Sum_probs=161.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+++|||||+||.+|++|.+.+..++++=.+.+... --..||++. ++.+.+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~------------------------skd~DLt~~------a~t~~l 50 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG------------------------SKDADLTNL------ADTRAL 50 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec------------------------cccccccch------HHHHHH
Confidence 36899999999999999999988765321111111 123577766 777777
Q ss_pred hc--CccEEEEcCCCCCc----hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccccc-ceeeccccCCCCC
Q 042694 190 AK--EVDVIVNSAANTTF----DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRR-GKVMEKPFCMGDS 262 (554)
Q Consensus 190 ~~--~vdiViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~-~~i~E~~~~~~~~ 262 (554)
++ ++..|||+||.|.- ....-.+++.|+.--.|++..|.+. +++.++++-|..++++.. -.|+|...-.+
T Consensus 51 F~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIfPdkt~yPIdEtmvh~g-- 127 (315)
T KOG1431|consen 51 FESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIFPDKTSYPIDETMVHNG-- 127 (315)
T ss_pred HhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeecCCCCCCCCCHHHhccC--
Confidence 75 78999999998752 2234578999999999999999995 899999998888888743 12333221110
Q ss_pred cccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhh----hhhcCCCcEEEEccceeeecccCCccccccC
Q 042694 263 IAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGL----GLERGDIPVVIIRPSVIESTCKEPFSGWMEG 338 (554)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~----~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~ 338 (554)
| +. .-..-|.+||+++.. +..+.|-..+.+-|.+|||+.++.-|.-.
T Consensus 128 ----------p----ph-------------psN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~s-- 178 (315)
T KOG1431|consen 128 ----------P----PH-------------PSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENS-- 178 (315)
T ss_pred ----------C----CC-------------CCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccc--
Confidence 0 00 001115667777652 23457889999999999998774322110
Q ss_pred CCCccceeee----eccce-eeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHH
Q 042694 339 NRMMDPIILY----YGKGQ-LTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARL 413 (554)
Q Consensus 339 ~~~~~~i~~~----~~~G~-~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~ 413 (554)
...-+++.. -..|. .-...+.+.-.+.++++||+|++++.....-. ..+-.+++.+....+|++|.++.
T Consensus 179 -HVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~-----~vEpiils~ge~~EVtI~e~aea 252 (315)
T KOG1431|consen 179 -HVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYE-----GVEPIILSVGESDEVTIREAAEA 252 (315)
T ss_pred -cchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhc-----CccceEeccCccceeEHHHHHHH
Confidence 011111110 11222 22344666667899999999999998775422 23456777775579999999999
Q ss_pred HHhHhccC
Q 042694 414 LHEHYSAS 421 (554)
Q Consensus 414 ~~~~~~~~ 421 (554)
+.+..+-.
T Consensus 253 V~ea~~F~ 260 (315)
T KOG1431|consen 253 VVEAVDFT 260 (315)
T ss_pred HHHHhCCC
Confidence 99987743
No 101
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.50 E-value=5.9e-13 Score=129.83 Aligned_cols=217 Identities=16% Similarity=0.154 Sum_probs=132.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.+++|+||||||++|+++++.|++++.+ |+.+.+. ..+.+..... ....++..+.+|+.++ +..
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~---v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~------~~~ 69 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAK---VVIYDSNEEAAEALAAELR-----AAGGEARVLVFDVSDE------AAV 69 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCChhHHHHHHHHHH-----hcCCceEEEEccCCCH------HHH
Confidence 4579999999999999999999998764 4444332 1122221111 1234688899999987 555
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
..+.+ .+|+|||+||.... .+.++..++.|+.++.++++.+... .+.++|+++||........
T Consensus 70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~ 149 (246)
T PRK05653 70 RALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNP 149 (246)
T ss_pred HHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCC
Confidence 54443 57999999987543 2346778999999999999888421 3567999999874422110
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEccceee
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPSVIE 325 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~~V~ 325 (554)
... .|..+|. +++.+++.. ...+++++++||+.+.
T Consensus 150 ----------------------------~~~------------~y~~sk~~~~~~~~~l~~~~-~~~~i~~~~i~pg~~~ 188 (246)
T PRK05653 150 ----------------------------GQT------------NYSAAKAGVIGFTKALALEL-ASRGITVNAVAPGFID 188 (246)
T ss_pred ----------------------------CCc------------HhHhHHHHHHHHHHHHHHHH-hhcCeEEEEEEeCCcC
Confidence 000 1222222 233333322 2358999999999998
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
++...++.... ..+..... ....++.++++++++..++..... ...+++|+++++
T Consensus 189 ~~~~~~~~~~~-------------~~~~~~~~-----~~~~~~~~~dva~~~~~~~~~~~~--~~~g~~~~~~gg 243 (246)
T PRK05653 189 TDMTEGLPEEV-------------KAEILKEI-----PLGRLGQPEEVANAVAFLASDAAS--YITGQVIPVNGG 243 (246)
T ss_pred CcchhhhhHHH-------------HHHHHhcC-----CCCCCcCHHHHHHHHHHHcCchhc--CccCCEEEeCCC
Confidence 75432111000 00010000 013467789999998887643221 224678998876
No 102
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.50 E-value=7.7e-13 Score=130.57 Aligned_cols=124 Identities=14% Similarity=0.122 Sum_probs=84.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+++++++||||+|+||++++++|++.|.+ |+++++. ....+.+.... ...++.++.+|++++ ++.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~---v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~ 71 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGAR---VVLVDRSELVHEVAAELRA-----AGGEALALTADLETY------AGA 71 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCchHHHHHHHHHHh-----cCCeEEEEEEeCCCH------HHH
Confidence 56889999999999999999999998764 4444432 11222221111 234678899999987 555
Q ss_pred HHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceec
Q 042694 187 DVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVN 245 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~ 245 (554)
..+.+ .+|++||+|+... + .+.++..+++|+.|+..+++.+.. + .+..++|++||...+
T Consensus 72 ~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 148 (260)
T PRK12823 72 QAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR 148 (260)
T ss_pred HHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc
Confidence 44443 6899999998431 1 235677789999988766655542 1 245689999997654
No 103
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.49 E-value=1.1e-12 Score=129.06 Aligned_cols=220 Identities=10% Similarity=0.115 Sum_probs=134.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+|+||||+|++|+.++++|++.|. +|++.++.. .+.+.+.... ...++..+.+|++++ ++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~i~~-----~~~~~~~~~~D~~~~------~~ 73 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGA---EVILNGRDPAKLAAAAESLKG-----QGLSAHALAFDVTDH------DA 73 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHh-----cCceEEEEEccCCCH------HH
Confidence 4689999999999999999999999876 455554321 1111111110 123578899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+.+ .+|+|||+||.... .+.++..+.+|+.|+..+++.+.+. .+..++|++||.......
T Consensus 74 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~ 153 (255)
T PRK07523 74 VRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR 153 (255)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC
Confidence 666654 48999999997532 2456788899999999999988642 245689999986442211
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEcccee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
+... .|..+|. +++.++.... ..|+++.++||+.+
T Consensus 154 ----------------------------~~~~------------~y~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~ 192 (255)
T PRK07523 154 ----------------------------PGIA------------PYTATKGAVGNLTKGMATDWA-KHGLQCNAIAPGYF 192 (255)
T ss_pred ----------------------------CCCc------------cHHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECcc
Confidence 0001 1222222 2333333222 35899999999998
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.++..... ... ......+.. .. ....+..++|+|++++.++..... .-.+.++++.++
T Consensus 193 ~t~~~~~~---~~~----~~~~~~~~~-~~--------~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~i~~~gg 250 (255)
T PRK07523 193 DTPLNAAL---VAD----PEFSAWLEK-RT--------PAGRWGKVEELVGACVFLASDASS--FVNGHVLYVDGG 250 (255)
T ss_pred cCchhhhh---ccC----HHHHHHHHh-cC--------CCCCCcCHHHHHHHHHHHcCchhc--CccCcEEEECCC
Confidence 77543211 000 000000000 00 012356789999998887754221 123578888776
No 104
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.49 E-value=2.6e-12 Score=125.71 Aligned_cols=125 Identities=17% Similarity=0.197 Sum_probs=89.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc------hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA------ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~------~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
.++++|+||||||+||++++++|++.+.+ +++++. ...+.+...... ...++..+.+|++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~---v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~---- 71 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGAD---VIVLDIHPMRGRAEADAVAAGIEA-----AGGKALGLAFDVRDF---- 71 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEcCcccccHHHHHHHHHHHHh-----cCCcEEEEEccCCCH----
Confidence 35689999999999999999999998865 343321 111222222111 234788999999987
Q ss_pred CHHHHHHHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHH-Hc---CCCceEEEEeece
Q 042694 182 EEDLADVIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAK-QC---NKLKLFVQVSTAY 243 (554)
Q Consensus 182 s~~~~~~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~-~~---~~~k~~v~vST~~ 243 (554)
+..+.+. .++|+|||+|+.... .+.++...++|+.|+.++++++. .+ .+.+++|++||..
T Consensus 72 --~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~ 149 (249)
T PRK12827 72 --AATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVA 149 (249)
T ss_pred --HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCch
Confidence 6555554 368999999997541 24567889999999999999997 21 3557899999976
Q ss_pred ecc
Q 042694 244 VNG 246 (554)
Q Consensus 244 v~~ 246 (554)
...
T Consensus 150 ~~~ 152 (249)
T PRK12827 150 GVR 152 (249)
T ss_pred hcC
Confidence 543
No 105
>PRK06128 oxidoreductase; Provisional
Probab=99.48 E-value=2.1e-12 Score=130.40 Aligned_cols=222 Identities=14% Similarity=0.119 Sum_probs=134.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+||||||+|+||++++++|++.|.+| .+...+.. ..+.+.+.... ...++..+.+|++++ +.
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V-~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~ 120 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADI-ALNYLPEEEQDAAEVVQLIQA-----EGRKAVALPGDLKDE------AF 120 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEE-EEEeCCcchHHHHHHHHHHHH-----cCCeEEEEecCCCCH------HH
Confidence 567999999999999999999999988754 11112111 11112211110 234678899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceeccccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~~ 249 (554)
.+.+++ ++|+|||+|+... + .+.++..+++|+.|+..+++.+... ..-.++|++||...+....
T Consensus 121 v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~ 200 (300)
T PRK06128 121 CRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP 200 (300)
T ss_pred HHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC
Confidence 555543 6899999999632 1 3468899999999999999999752 2235899999987654321
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCch----HHHHHHHhhhhhcCCCcEEEEccceee
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDG----EVAQKMKGLGLERGDIPVVIIRPSVIE 325 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k----~~ae~l~e~~~~~~glp~~I~Rp~~V~ 325 (554)
+ .. .|..+| .+++.++.+.. ..|+++.+++||.|.
T Consensus 201 ~----------------------------~~------------~Y~asK~a~~~~~~~la~el~-~~gI~v~~v~PG~i~ 239 (300)
T PRK06128 201 T----------------------------LL------------DYASTKAAIVAFTKALAKQVA-EKGIRVNAVAPGPVW 239 (300)
T ss_pred C----------------------------ch------------hHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEECcCc
Confidence 0 00 122222 23334443332 248999999999997
Q ss_pred ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 326 STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 326 g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
++..... ... ......++.+ . + ...+...++++++++.++..... --.+++|++.++
T Consensus 240 t~~~~~~--~~~-----~~~~~~~~~~-~------p--~~r~~~p~dva~~~~~l~s~~~~--~~~G~~~~v~gg 296 (300)
T PRK06128 240 TPLQPSG--GQP-----PEKIPDFGSE-T------P--MKRPGQPVEMAPLYVLLASQESS--YVTGEVFGVTGG 296 (300)
T ss_pred CCCcccC--CCC-----HHHHHHHhcC-C------C--CCCCcCHHHHHHHHHHHhCcccc--CccCcEEeeCCC
Confidence 7543110 000 0000000100 0 0 12355778999998877654221 123578998876
No 106
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.48 E-value=3e-12 Score=124.39 Aligned_cols=210 Identities=13% Similarity=0.135 Sum_probs=130.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++||||||||++|+++++.|++.+. +|+++.+.. +...+... +....++..+.+|+.+. ++..
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~---~v~~~~r~~-~~~~~~~~----~~~~~~~~~~~~D~~~~------~~~~ 70 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGA---RVALIGRGA-APLSQTLP----GVPADALRIGGIDLVDP------QAAR 70 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCC---eEEEEeCCh-HhHHHHHH----HHhhcCceEEEeecCCH------HHHH
Confidence 4578999999999999999999999875 456554321 11111100 00122456788999887 5555
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+ ++|+|||+|+.... .+.+++.+.+|+.++.++++.+.+. .+.+++|++||...+....
T Consensus 71 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~- 149 (239)
T PRK12828 71 RAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP- 149 (239)
T ss_pred HHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC-
Confidence 5443 68999999986432 3456778999999999999887531 3578999999986644311
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
... .|..+|. +++.++... ...++++.++|||.+++
T Consensus 150 ---------------------------~~~------------~y~~sk~a~~~~~~~~a~~~-~~~~i~~~~i~pg~v~~ 189 (239)
T PRK12828 150 ---------------------------GMG------------AYAAAKAGVARLTEALAAEL-LDRGITVNAVLPSIIDT 189 (239)
T ss_pred ---------------------------Ccc------------hhHHHHHHHHHHHHHHHHHh-hhcCeEEEEEecCcccC
Confidence 000 1111222 222332222 23589999999999987
Q ss_pred cccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 327 TCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 327 ~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+.... . . + ......+++++|+++++..++..... .-.++.+++.++
T Consensus 190 ~~~~~------~--~--~----------------~~~~~~~~~~~dva~~~~~~l~~~~~--~~~g~~~~~~g~ 235 (239)
T PRK12828 190 PPNRA------D--M--P----------------DADFSRWVTPEQIAAVIAFLLSDEAQ--AITGASIPVDGG 235 (239)
T ss_pred cchhh------c--C--C----------------chhhhcCCCHHHHHHHHHHHhCcccc--cccceEEEecCC
Confidence 52210 0 0 0 00012378999999998887754321 123577887765
No 107
>PRK09186 flagellin modification protein A; Provisional
Probab=99.48 E-value=8.9e-13 Score=129.70 Aligned_cols=126 Identities=20% Similarity=0.284 Sum_probs=84.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||||+||++++++|++.+.+ |+++.+ +..+.+.+.... ......+.++.+|++++ ++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~---v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~------~~ 69 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGI---VIAADIDKEALNELLESLGK---EFKSKKLSLVELDITDQ------ES 69 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEecChHHHHHHHHHHHh---hcCCCceeEEEecCCCH------HH
Confidence 46789999999999999999999998764 444332 222222222110 00123566789999988 66
Q ss_pred HHHHhc-------CccEEEEcCCCCC------c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTT------F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~------~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
+..+.+ .+|+|||+|+... + .+.+...+++|+.++..+++.+... .+..++|++||.+..
T Consensus 70 ~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 149 (256)
T PRK09186 70 LEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGV 149 (256)
T ss_pred HHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhh
Confidence 666554 3899999997431 1 2356778899998887777665431 245699999997654
No 108
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.47 E-value=7.2e-13 Score=130.55 Aligned_cols=123 Identities=16% Similarity=0.216 Sum_probs=88.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+++||||||||+||++++++|++.|. +|+++++.. .+.+.+.... ...++..+.+|++++ +.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~ 68 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA---DVVLAARTAERLDEVAAEIDD-----LGRRALAVPTDITDE------DQ 68 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHH-----hCCceEEEecCCCCH------HH
Confidence 4678999999999999999999999886 455554321 1222221110 134678999999987 66
Q ss_pred HHHHh-------cCccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeecee
Q 042694 186 ADVIA-------KEVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~-------~~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v 244 (554)
.+.+. .++|+|||+|+.... .+.++..+++|+.|+..+++.+... +...++|++||...
T Consensus 69 ~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~ 144 (258)
T PRK07890 69 CANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVL 144 (258)
T ss_pred HHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhh
Confidence 55444 368999999986321 3567888999999999999998752 12258999999755
No 109
>PRK06194 hypothetical protein; Provisional
Probab=99.47 E-value=8.6e-13 Score=132.24 Aligned_cols=125 Identities=10% Similarity=0.051 Sum_probs=88.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++||||||+|+||++++++|++.|. +|++++.. ..+.+.+.... ...++..+.+|++++ ++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~d~------~~ 69 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGM---KLVLADVQQDALDRAVAELRA-----QGAEVLGVRTDVSDA------AQ 69 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHHHHh-----cCCeEEEEECCCCCH------HH
Confidence 3578999999999999999999999876 45555432 22222222111 134688899999987 67
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHH----HcCC-----CceEEEEeec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAK----QCNK-----LKLFVQVSTA 242 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~----~~~~-----~k~~v~vST~ 242 (554)
++.+.+ .+|+|||+||.... .+.++...++|+.|+.++++++. +... ..++|++||.
T Consensus 70 ~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~ 149 (287)
T PRK06194 70 VEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASM 149 (287)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCCh
Confidence 766655 58999999998543 24567789999999999877753 2111 1489999997
Q ss_pred eecc
Q 042694 243 YVNG 246 (554)
Q Consensus 243 ~v~~ 246 (554)
+.+.
T Consensus 150 ~~~~ 153 (287)
T PRK06194 150 AGLL 153 (287)
T ss_pred hhcc
Confidence 6654
No 110
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.47 E-value=2.3e-12 Score=126.26 Aligned_cols=125 Identities=15% Similarity=0.186 Sum_probs=89.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++++|+||||||++|++++++|++.+.+ |+.+.+.. .+.+..... ...++.++.+|++++ +.
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~---V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~D~~~~------~~ 67 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGAR---VVVTDRNEEAAERVAAEIL------AGGRAIAVAADVSDE------AD 67 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHHh------cCCeEEEEECCCCCH------HH
Confidence 45789999999999999999999988764 55554322 111111111 024678899999988 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
.+.+.+ .+|+|||+|+.... .+.++..+++|+.|+..+++.+... .+.++||++||...+..
T Consensus 68 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~ 147 (251)
T PRK07231 68 VEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP 147 (251)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC
Confidence 766654 57999999986321 2457788999999988888777532 35678999999866543
No 111
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.46 E-value=3.2e-12 Score=124.82 Aligned_cols=122 Identities=21% Similarity=0.287 Sum_probs=86.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
++++|+||||||++|+++++.|++.|.+ |+++ ++.. ...+..... ....++..+.+|++++ +.
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~---v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~------~~ 69 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGAN---VVINYASSEAGAEALVAEIG-----ALGGKALAVQGDVSDA------ES 69 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCchhHHHHHHHHHH-----hcCCceEEEEcCCCCH------HH
Confidence 5689999999999999999999998764 4333 3221 112211111 0235788999999988 65
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
+..+.+ ++|+|||+|+.... .+.++....+|+.++.++++.+... .+.++|+++||...
T Consensus 70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~ 145 (248)
T PRK05557 70 VERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVG 145 (248)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEccccc
Confidence 555443 68999999987432 2356788899999999999888652 24568999998743
No 112
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.46 E-value=5e-12 Score=124.99 Aligned_cols=123 Identities=16% Similarity=0.194 Sum_probs=86.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+||||||++|++++++|++.+. +|+.+++. ..+.+.+.... ...++..+.+|++++ +.+.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~---~Vi~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~------~~~~ 66 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA---QLVLAARNETRLASLAQELAD-----HGGEALVVPTDVSDA------EACE 66 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HHHH
Confidence 46899999999999999999998776 44444432 11222221111 234788899999987 6555
Q ss_pred HHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceecc
Q 042694 188 VIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~ 246 (554)
.+.+ ++|+|||+|+.... .+.+.+..++|+.|+.++++.+... .+..++|++||...+.
T Consensus 67 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~ 142 (263)
T PRK06181 67 RLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT 142 (263)
T ss_pred HHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 5543 68999999987542 1236677999999999999998531 2346899999976543
No 113
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.45 E-value=1.4e-12 Score=127.77 Aligned_cols=218 Identities=15% Similarity=0.060 Sum_probs=128.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++++||||||+||++++++|++.+..| +++. +++ ....+..... ....++..+.+|++++ +.+.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~v--v~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~Dl~~~------~~~~ 68 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAV--CLNYLRNRDAAEAVVQAIR-----RQGGEALAVAADVADE------ADVL 68 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeE--EEecCCCHHHHHHHHHHHH-----hCCCcEEEEEeccCCH------HHHH
Confidence 4689999999999999999999987643 2222 221 1111111111 0124677899999987 6665
Q ss_pred HHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHcCC------CceEEEEeeceecc
Q 042694 188 VIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQCNK------LKLFVQVSTAYVNG 246 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~~~------~k~~v~vST~~v~~ 246 (554)
.+.+ .+|+|||+|+.... .+.+...+++|+.|+..+++.+...-. -.+++++||.....
T Consensus 69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 148 (248)
T PRK06123 69 RLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL 148 (248)
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC
Confidence 5554 68999999987531 235678899999999999888764211 23689999975432
Q ss_pred cccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccce
Q 042694 247 QRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSV 323 (554)
Q Consensus 247 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~ 323 (554)
...+ .. . .|..+|...+.++..+. ...|+++.++||+.
T Consensus 149 ~~~~--------------------------~~-~------------~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~ 189 (248)
T PRK06123 149 GSPG--------------------------EY-I------------DYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGV 189 (248)
T ss_pred CCCC--------------------------Cc-c------------chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCc
Confidence 2110 00 0 13333443344333222 23589999999999
Q ss_pred eeecccCC--ccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEP--FSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p--~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|+++.... .+.+... . .+..+ - .-...++|++++++.++..... ...+.+|++.++
T Consensus 190 v~~~~~~~~~~~~~~~~----------~-~~~~p------~--~~~~~~~d~a~~~~~l~~~~~~--~~~g~~~~~~gg 247 (248)
T PRK06123 190 IYTEIHASGGEPGRVDR----------V-KAGIP------M--GRGGTAEEVARAILWLLSDEAS--YTTGTFIDVSGG 247 (248)
T ss_pred ccCchhhccCCHHHHHH----------H-HhcCC------C--CCCcCHHHHHHHHHHHhCcccc--CccCCEEeecCC
Confidence 98864321 0111100 0 00111 0 0123579999999887654221 123578888654
No 114
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.45 E-value=5.4e-12 Score=122.85 Aligned_cols=123 Identities=15% Similarity=0.206 Sum_probs=87.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++|+||||||+||++++++|++.+. +|+++.+.. .+.+..... ....++.++.+|++++ +..
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~---~Vi~~~r~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~------~~~ 71 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV---NVGLLARTEENLKAVAEEVE-----AYGVKVVIATADVSDY------EEV 71 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHH-----HhCCeEEEEECCCCCH------HHH
Confidence 568999999999999999999998775 455444321 111111111 1234788999999987 665
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
..+.+ .+|+|||+|+.... .+.+++.+++|+.|+.++++.+... .+.+++|++||....
T Consensus 72 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~ 147 (239)
T PRK07666 72 TAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ 147 (239)
T ss_pred HHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhc
Confidence 55554 79999999986432 2456788999999999999887631 245789999997653
No 115
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.44 E-value=2e-12 Score=131.82 Aligned_cols=124 Identities=14% Similarity=0.092 Sum_probs=88.0
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++|+||||||+||.++++.|++.|. +|+++.+ ...+.+.+.... ...++..+.+|++++ +..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~------~~v 70 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW---HVIMACRNLKKAEAAAQELGI-----PPDSYTIIHIDLGDL------DSV 70 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhc-----cCCceEEEEecCCCH------HHH
Confidence 578999999999999999999999875 4555433 222222222211 124688899999987 655
Q ss_pred HHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CC--CceEEEEeeceecc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NK--LKLFVQVSTAYVNG 246 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~--~k~~v~vST~~v~~ 246 (554)
+.+.+ .+|+|||+||.... .+.++..+++|+.|+..+++++... .+ ..++|++||...+.
T Consensus 71 ~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 71 RRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred HHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 55543 49999999996321 2467888999999999998887642 11 24899999986644
No 116
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.43 E-value=5.3e-12 Score=124.46 Aligned_cols=120 Identities=14% Similarity=0.189 Sum_probs=82.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.+|++|||||+|+||++++++|++.+.+ ++++.. ...+.+.+.... ...++..+.+|++++ +.
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~---v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~------~~ 73 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFD---VAVHYNRSRDEAEALAAEIRA-----LGRRAVALQADLADE------AE 73 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCHHHHHHHHHHHHh-----cCCeEEEEEcCCCCH------HH
Confidence 5789999999999999999999987753 443322 112222222110 134688899999987 55
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcC---CCceEEEEeec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCN---KLKLFVQVSTA 242 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~---~~k~~v~vST~ 242 (554)
...+++ .+|+|||+|+.... .+.++..+++|+.|+..+++.+.... .-..++++||.
T Consensus 74 ~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~ 147 (258)
T PRK09134 74 VRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQ 147 (258)
T ss_pred HHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECch
Confidence 555443 58999999986432 24678889999999999999886521 22467777664
No 117
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.42 E-value=5.1e-12 Score=121.81 Aligned_cols=116 Identities=13% Similarity=0.211 Sum_probs=82.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+|+||||||+||++++++|++. + +|+++.+.. .+.+.+. ...+.++.+|++++ +.+.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~---~V~~~~r~~~~~~~~~~~---------~~~~~~~~~D~~~~------~~~~ 63 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H---TLLLGGRPAERLDELAAE---------LPGATPFPVDLTDP------EAIA 63 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C---CEEEEeCCHHHHHHHHHH---------hccceEEecCCCCH------HHHH
Confidence 578999999999999999999986 4 466665432 1112111 13577899999987 7777
Q ss_pred HHhc---CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHH----HHHHHHHcCCCceEEEEeeceecc
Q 042694 188 VIAK---EVDVIVNSAANTTF-------DERYDIAIDINTRGPCR----LMEFAKQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 188 ~l~~---~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~----ll~la~~~~~~k~~v~vST~~v~~ 246 (554)
.+.+ ++|+|||+|+.... .+.+....+.|+.++.+ +++.+++ +.++++++||...+.
T Consensus 64 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~v~~ss~~~~~ 134 (227)
T PRK08219 64 AAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA--AHGHVVFINSGAGLR 134 (227)
T ss_pred HHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCeEEEEcchHhcC
Confidence 7765 59999999987532 13466778999999544 4444443 346899999876643
No 118
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.42 E-value=1.4e-11 Score=119.69 Aligned_cols=121 Identities=17% Similarity=0.204 Sum_probs=86.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.+++|+||||||++|+++++.|++.+. +|+++.+.. ...+.+.... . .++..+.+|+.++ +++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~---~V~~~~r~~~~~~~~~~~l~~-----~-~~~~~~~~D~~~~------~~~ 69 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY---KVAITARDQKELEEAAAELNN-----K-GNVLGLAADVRDE------ADV 69 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEeeCCHHHHHHHHHHHhc-----c-CcEEEEEccCCCH------HHH
Confidence 468999999999999999999998765 455554321 1122222111 1 5788999999987 555
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeecee
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYV 244 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v 244 (554)
..+.+ .+|+|||+|+.... .+.++..+++|+.|+..+++.+... .+..++|++||...
T Consensus 70 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 143 (237)
T PRK07326 70 QRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAG 143 (237)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhh
Confidence 54443 79999999987532 3456788999999999998887642 24467999998754
No 119
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.42 E-value=5.3e-12 Score=123.22 Aligned_cols=121 Identities=17% Similarity=0.237 Sum_probs=86.4
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++++||||||+||+++++.|++.+. .|++.++. .+++.+.... ...++.++.+|+++. +.++.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~---~v~~~~~~-~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~~~ 69 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA---IVGLHGTR-VEKLEALAAE-----LGERVKIFPANLSDR------DEVKA 69 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCC-HHHHHHHHHH-----hCCceEEEEccCCCH------HHHHH
Confidence 578999999999999999999999875 44444332 1222221110 124678899999987 66555
Q ss_pred Hh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 189 IA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
+. .++|+|||+|+.... .+.++..+++|+.|+..+++.+... .+..+||++||...
T Consensus 70 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 142 (245)
T PRK12936 70 LGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVG 142 (245)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHh
Confidence 43 368999999997532 3467888999999999998876531 24568999999644
No 120
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.42 E-value=3.3e-12 Score=124.74 Aligned_cols=218 Identities=14% Similarity=0.181 Sum_probs=134.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++++||||+|++|+++++.|++.++ +|+++.+.. +.+.+... ..+...+.+|++++ +...
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~---~V~~~~r~~-~~~~~~~~-------~~~~~~~~~D~~~~------~~v~ 69 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGA---RVVAAARNA-AALDRLAG-------ETGCEPLRLDVGDD------AAIR 69 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHH-------HhCCeEEEecCCCH------HHHH
Confidence 4578999999999999999999999876 455554421 12211110 01245688999887 5555
Q ss_pred HHhc---CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcC----CCceEEEEeeceecccccceee
Q 042694 188 VIAK---EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCN----KLKLFVQVSTAYVNGQRRGKVM 253 (554)
Q Consensus 188 ~l~~---~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~----~~k~~v~vST~~v~~~~~~~i~ 253 (554)
.+.+ .+|+|||+|+.... .+.++..+++|+.++.++++.+.+.. ...+|+++||...+....
T Consensus 70 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---- 145 (245)
T PRK07060 70 AALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP---- 145 (245)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC----
Confidence 5554 58999999997542 24677888999999999999886531 135899999875543211
Q ss_pred ccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeecccC
Q 042694 254 EKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIESTCKE 330 (554)
Q Consensus 254 E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~~~~ 330 (554)
.. . .|..+|...+.+++.+. ...++++..+||+.+.++...
T Consensus 146 ------------------------~~------~------~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~ 189 (245)
T PRK07060 146 ------------------------DH------L------AYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAA 189 (245)
T ss_pred ------------------------CC------c------HhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhh
Confidence 00 0 22333444444443332 124799999999999775421
Q ss_pred CccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 331 PFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 331 p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
. .|.+. ....++. ... + ...+++++|++++++.++..... ...++++++.++
T Consensus 190 ~--~~~~~-~~~~~~~--------~~~---~--~~~~~~~~d~a~~~~~l~~~~~~--~~~G~~~~~~~g 241 (245)
T PRK07060 190 E--AWSDP-QKSGPML--------AAI---P--LGRFAEVDDVAAPILFLLSDAAS--MVSGVSLPVDGG 241 (245)
T ss_pred h--hccCH-HHHHHHH--------hcC---C--CCCCCCHHHHHHHHHHHcCcccC--CccCcEEeECCC
Confidence 1 11110 0000000 000 1 23478999999999888754321 224577877655
No 121
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.42 E-value=1.1e-11 Score=120.75 Aligned_cols=124 Identities=12% Similarity=0.059 Sum_probs=88.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++++||||||++|+.++++|++++. +|+++++.. .+.+.+.... ...++.++.+|++++ +..
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~ 70 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW---DLALVARSQDALEALAAELRS-----TGVKAAAYSIDLSNP------EAI 70 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----CCCcEEEEEccCCCH------HHH
Confidence 468999999999999999999999876 456555322 2222222111 224788899999987 555
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
..+.+ .+|+|||+|+.... .+.++...++|+.++.++++.+... .+..++|++||...+.
T Consensus 71 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 147 (241)
T PRK07454 71 APGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN 147 (241)
T ss_pred HHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc
Confidence 54443 58999999986432 2457788999999998888776431 2456899999986654
No 122
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.41 E-value=4.3e-12 Score=125.04 Aligned_cols=226 Identities=9% Similarity=0.078 Sum_probs=134.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHH-HHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFK-CLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~-~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++++|+||||||+||++++++|++.+..| +++.+.... .+.+.... ...++..+.+|++++ +.+
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v---~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~ 70 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIP---VIFGRSAPDDEFAEELRA-----LQPRAEFVQVDLTDD------AQC 70 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcE---EEEcCChhhHHHHHHHHh-----cCCceEEEEccCCCH------HHH
Confidence 467899999999999999999999988654 333321111 11111111 234688999999987 655
Q ss_pred HHHhc-------CccEEEEcCCCCC---c---hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceecccccce
Q 042694 187 DVIAK-------EVDVIVNSAANTT---F---DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNGQRRGK 251 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~---~---~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~~~~~~ 251 (554)
..+.+ .+|+|||+|+... + .+.++...++|+.++..+.+.+... .+..+|+++||........
T Consensus 71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-- 148 (258)
T PRK08628 71 RDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG-- 148 (258)
T ss_pred HHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC--
Confidence 55543 6899999999532 1 2567788999999999998887642 1235899999975532210
Q ss_pred eeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeecc
Q 042694 252 VMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 252 i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~~ 328 (554)
... .|..+|...+.+++... ...++++..+|||.|.++.
T Consensus 149 --------------------------~~~------------~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 149 --------------------------GTS------------GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred --------------------------CCc------------hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 000 23334444444443322 2358999999999998754
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.. .|........... .......+ ....+++.+|++++++.++..... ...+..|.+.++
T Consensus 191 ~~---~~~~~~~~~~~~~----~~~~~~~~----~~~~~~~~~dva~~~~~l~~~~~~--~~~g~~~~~~gg 249 (258)
T PRK08628 191 YE---NWIATFDDPEAKL----AAITAKIP----LGHRMTTAEEIADTAVFLLSERSS--HTTGQWLFVDGG 249 (258)
T ss_pred HH---HHhhhccCHHHHH----HHHHhcCC----ccccCCCHHHHHHHHHHHhChhhc--cccCceEEecCC
Confidence 32 2221110000000 00000000 002467889999999888765421 223567777654
No 123
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.41 E-value=1.6e-11 Score=121.95 Aligned_cols=121 Identities=18% Similarity=0.098 Sum_probs=83.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
|+|+||||||+||++++++|++++.+ |++.+.. ..+.+...... ...++..+.+|++++ ++...
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~---V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~------~~~~~ 66 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWR---LALADVNEEGGEETLKLLRE-----AGGDGFYQRCDVRDY------SQLTA 66 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHHHh-----cCCceEEEEccCCCH------HHHHH
Confidence 47999999999999999999998764 4444332 11111111110 234678899999987 55555
Q ss_pred Hhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeeceecc
Q 042694 189 IAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v~~ 246 (554)
+.+ .+|+|||+|+.... .+.++..+++|+.|+..+.+.+ ++ .+..++|++||.....
T Consensus 67 ~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~ 141 (270)
T PRK05650 67 LAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKR-QKSGRIVNIASMAGLM 141 (270)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh-CCCCEEEEECChhhcC
Confidence 443 69999999997643 2456778899999888876664 34 3567899999975543
No 124
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.41 E-value=2e-11 Score=122.78 Aligned_cols=124 Identities=17% Similarity=0.214 Sum_probs=87.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||++++++|++.|. +|+++++. ..+.+.+.... ...++..+.+|++++ ++
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~---~Vi~~~R~~~~l~~~~~~l~~-----~~~~~~~~~~Dl~d~------~~ 103 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGA---TVVAVARREDLLDAVADRITR-----AGGDAMAVPCDLSDL------DA 103 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HH
Confidence 4678999999999999999999998775 45555432 22222222111 124577899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc---------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF---------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~ 245 (554)
...+.+ ++|+|||+||.... .+.++..+++|+.|+..+++.+.. + .+..++|++||..+.
T Consensus 104 v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 182 (293)
T PRK05866 104 VDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVL 182 (293)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhc
Confidence 666655 79999999986432 134567889999998888776542 1 345789999997543
No 125
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.41 E-value=5.3e-12 Score=124.49 Aligned_cols=229 Identities=10% Similarity=0.015 Sum_probs=131.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+||||+|+||+++++.|++.+. +|+++++.. .+.+.+.... .....++..+.+|++++ ++..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~---~vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~------~~i~ 69 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY---RVAVADINSEKAANVAQEINA---EYGEGMAYGFGADATSE------QSVL 69 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHH---hcCCceeEEEEccCCCH------HHHH
Confidence 57899999999999999999998775 455554321 1122111100 00113688999999987 5555
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeecee-cccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAYV-NGQR 248 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~v-~~~~ 248 (554)
.+.+ .+|+|||+|+.... .+.++..+++|+.|+..+++.+... .+ ..+++++||... ++..
T Consensus 70 ~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~ 149 (259)
T PRK12384 70 ALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK 149 (259)
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC
Confidence 4443 68999999986432 2467788999999998888877542 23 358999998542 1110
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHH----HHHHHhhhhhcCCCcEEEEcccee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEV----AQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~----ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
... .|..+|.. ++.++.+.. ..|+++.++|||.+
T Consensus 150 -----------------------------~~~------------~Y~~sKaa~~~l~~~la~e~~-~~gi~v~~v~pg~~ 187 (259)
T PRK12384 150 -----------------------------HNS------------GYSAAKFGGVGLTQSLALDLA-EYGITVHSLMLGNL 187 (259)
T ss_pred -----------------------------CCc------------hhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCCc
Confidence 000 23333333 333333322 35899999999988
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+++... .+.+.... .. .....+.......+......+++.+|++++++.++..... ...+.+|++.++
T Consensus 188 ~~~~~~--~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~--~~~G~~~~v~~g 255 (259)
T PRK12384 188 LKSPMF--QSLLPQYA--KK--LGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKAS--YCTGQSINVTGG 255 (259)
T ss_pred ccchhh--hhhhHHHH--Hh--cCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccc--cccCceEEEcCC
Confidence 654211 11110000 00 0000000000001111234678899999999877654321 123678999876
No 126
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.41 E-value=1.1e-11 Score=121.16 Aligned_cols=124 Identities=19% Similarity=0.196 Sum_probs=87.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-h-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-E-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||+|+||+++++.|++.+.++ +.+.++ + ..+.+.+.... ...++..+.+|++++ +.
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~ 69 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAV--AVNYAGSAAAADELVAEIEA-----AGGRAIAVQADVADA------AA 69 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEE--EEecCCCHHHHHHHHHHHHh-----cCCeEEEEECCCCCH------HH
Confidence 357899999999999999999999988643 222222 1 11222222111 235788999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~v 244 (554)
...+++ ++|+|||+|+.... .+.++..+++|+.|+.++++.+.+ +..-.+++++||...
T Consensus 70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 143 (245)
T PRK12937 70 VTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVI 143 (245)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccc
Confidence 655554 68999999997542 346778899999999999988864 222358999998644
No 127
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.40 E-value=1.9e-11 Score=119.68 Aligned_cols=123 Identities=16% Similarity=0.172 Sum_probs=87.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||+|.||++++++|++.++ +|+++.+.. ...+.+.... ...++.++.+|++++ +.
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~---~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~ 70 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA---TVAFNDGLAAEARELAAALEA-----AGGRAHAIAADLADP------AS 70 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HH
Confidence 3578999999999999999999999876 455554321 1122211110 124688999999987 66
Q ss_pred HHHHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 186 ADVIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
.+.+. .++|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..+||++||...
T Consensus 71 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~ 146 (250)
T PRK12939 71 VQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTA 146 (250)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhh
Confidence 65555 368999999997432 2467788899999999999988642 12348999999654
No 128
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.39 E-value=6.4e-12 Score=124.73 Aligned_cols=117 Identities=17% Similarity=0.140 Sum_probs=87.1
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++|+||||||+||++++++|++.|. +|+++.+.. +.+. ...+++.+.+|++++ ++++.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~---~V~~~~r~~-~~~~----------~~~~~~~~~~D~~d~------~~~~~ 62 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY---RVFGTSRNP-ARAA----------PIPGVELLELDVTDD------ASVQA 62 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCh-hhcc----------ccCCCeeEEeecCCH------HHHHH
Confidence 357899999999999999999999876 455544321 1110 124678899999988 77666
Q ss_pred Hhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 189 IAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
+.+ .+|+|||+|+.... .+.++..+++|+.|+..+++.+... .+.+++|++||...+
T Consensus 63 ~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 136 (270)
T PRK06179 63 AVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGF 136 (270)
T ss_pred HHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCcccc
Confidence 655 47999999997542 2467889999999999999886321 357799999997553
No 129
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.39 E-value=2e-11 Score=119.27 Aligned_cols=222 Identities=17% Similarity=0.207 Sum_probs=132.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+.+++|+||||||+||+++++.|++.+.+ ++.+ ++. ..+.+...... ...++.++.+|++++ +
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~---v~~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~ 68 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAK---VVIAYDINEEAAQELLEEIKE-----EGGDAIAVKADVSSE------E 68 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCCHHHHHHHHHHHHh-----cCCeEEEEECCCCCH------H
Confidence 45789999999999999999999987753 4444 432 11122221111 234688999999988 6
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccc
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~ 247 (554)
.+..+.+ ++|+|||+|+.... .+.++..+++|+.|+.++++.+... .+.++||++||......
T Consensus 69 ~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~ 148 (247)
T PRK05565 69 DVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG 148 (247)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccC
Confidence 6555543 79999999997532 2457788999999998888877642 23567999999755332
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.. ....+...+... ..+++.+++... ..|++++++|||.+-.+
T Consensus 149 ~~----------------------------~~~~y~~sK~a~--------~~~~~~~~~~~~-~~gi~~~~v~pg~v~t~ 191 (247)
T PRK05565 149 AS----------------------------CEVLYSASKGAV--------NAFTKALAKELA-PSGIRVNAVAPGAIDTE 191 (247)
T ss_pred CC----------------------------CccHHHHHHHHH--------HHHHHHHHHHHH-HcCeEEEEEEECCccCc
Confidence 11 000111111110 133444444433 35899999999998543
Q ss_pred ccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 328 CKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 328 ~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....... . .... ..... + ...+...++++++++.++..... ...++++++.++
T Consensus 192 ~~~~~~~-~----~~~~--------~~~~~---~--~~~~~~~~~va~~~~~l~~~~~~--~~~g~~~~~~~~ 244 (247)
T PRK05565 192 MWSSFSE-E----DKEG--------LAEEI---P--LGRLGKPEEIAKVVLFLASDDAS--YITGQIITVDGG 244 (247)
T ss_pred cccccCh-H----HHHH--------HHhcC---C--CCCCCCHHHHHHHHHHHcCCccC--CccCcEEEecCC
Confidence 2211110 0 0000 00000 0 12356779999988887754321 223567777654
No 130
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.39 E-value=7e-12 Score=123.59 Aligned_cols=162 Identities=15% Similarity=0.150 Sum_probs=107.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+||||||+||+++++.|++.|. +|+++++. ..+.+.+.... ..++..+.+|++++ +.+.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~---~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~------~~i~ 66 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA---TLGLVARRTDALQAFAARLPK------AARVSVYAADVRDA------DALA 66 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHhccc------CCeeEEEEcCCCCH------HHHH
Confidence 47899999999999999999999876 45555432 12222222211 12788999999987 5555
Q ss_pred HHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeeceecccc
Q 042694 188 VIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v~~~~ 248 (554)
.+.+ .+|++||+|+.... .+.++...++|+.|+..+++.. ++ .+..++|++||.......
T Consensus 67 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~-~~~~~iv~isS~~~~~~~ 145 (257)
T PRK07024 67 AAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRA-ARRGTLVGIASVAGVRGL 145 (257)
T ss_pred HHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHh-cCCCEEEEEechhhcCCC
Confidence 5443 48999999986431 1457889999999999988743 33 345689999986543221
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIE 325 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~ 325 (554)
. ... .|..+|...+.+.+... ...|++++++|||.|.
T Consensus 146 ~----------------------------~~~------------~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 185 (257)
T PRK07024 146 P----------------------------GAG------------AYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIR 185 (257)
T ss_pred C----------------------------CCc------------chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCc
Confidence 0 000 23444444444443322 2358999999999996
Q ss_pred ec
Q 042694 326 ST 327 (554)
Q Consensus 326 g~ 327 (554)
++
T Consensus 186 t~ 187 (257)
T PRK07024 186 TP 187 (257)
T ss_pred Cc
Confidence 54
No 131
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.39 E-value=6e-12 Score=124.16 Aligned_cols=125 Identities=18% Similarity=0.197 Sum_probs=88.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++||||||+|+||+++++.|++.|. +|+.+++.. .+.+..... ....++..+.+|++++ +.
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~i~-----~~~~~~~~~~~Dl~d~------~~ 75 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGA---RVVLSARKAEELEEAAAHLE-----ALGIDALWIAADVADE------AD 75 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHH-----hcCCeEEEEEccCCCH------HH
Confidence 4678999999999999999999999776 455444321 122221111 0234678899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v~~ 246 (554)
++.+.+ .+|+|||+|+.... .+.++...++|+.|+.++++.+... ++..+||++||.....
T Consensus 76 i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~ 154 (259)
T PRK08213 76 IERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLG 154 (259)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhcc
Confidence 644432 58999999986421 2456788899999999999987653 2456899999975543
No 132
>PRK06182 short chain dehydrogenase; Validated
Probab=99.39 E-value=1.3e-11 Score=122.79 Aligned_cols=117 Identities=15% Similarity=0.192 Sum_probs=84.5
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++|+||||||+||++++++|++.|. +|+++.+. .+++++.. ..++.++.+|++++ ++++.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~-~~~l~~~~--------~~~~~~~~~Dv~~~------~~~~~ 63 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY---TVYGAARR-VDKMEDLA--------SLGVHPLSLDVTDE------ASIKA 63 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCC-HHHHHHHH--------hCCCeEEEeeCCCH------HHHHH
Confidence 468999999999999999999998876 45555432 22333221 12577899999987 77666
Q ss_pred Hhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHH----HHHHHcCCCceEEEEeecee
Q 042694 189 IAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLM----EFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll----~la~~~~~~k~~v~vST~~v 244 (554)
+.+ ++|+|||+|+.... .+.++..+++|+.|+..++ ..+++ .+..++|++||.+.
T Consensus 64 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~-~~~g~iv~isS~~~ 136 (273)
T PRK06182 64 AVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRA-QRSGRIINISSMGG 136 (273)
T ss_pred HHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHh-cCCCEEEEEcchhh
Confidence 654 78999999997543 2467788999999955544 45554 35678999999653
No 133
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.38 E-value=3.1e-11 Score=120.10 Aligned_cols=121 Identities=17% Similarity=0.098 Sum_probs=84.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++|+||||||.||+.++++|++.|.+ |.+.++. -+++.+... ...++..+.+|++++ ++++.
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~---v~~~~r~-~~~~~~~~~------~~~~~~~~~~D~~~~------~~~~~ 67 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGAR---VAIGDLD-EALAKETAA------ELGLVVGGPLDVTDP------ASFAA 67 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEECC-HHHHHHHHH------HhccceEEEccCCCH------HHHHH
Confidence 4689999999999999999999998764 4444322 122222111 112577899999987 55444
Q ss_pred Hh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 189 IA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 189 l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
+. ..+|++||+|+.... .+.++..+++|+.|+..+.+.+... .+..++|++||....
T Consensus 68 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 141 (273)
T PRK07825 68 FLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGK 141 (273)
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCcccc
Confidence 33 368999999997532 2357788999999999888776431 345689999997553
No 134
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.38 E-value=8.1e-12 Score=122.93 Aligned_cols=120 Identities=17% Similarity=0.084 Sum_probs=84.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++||||||||+||+++++.|++.|.. |+++.+ .....+++.... ...++.++.+|++++ +.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~---v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~~ 67 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHN---VIAGVQIAPQVTALRAEAAR-----RGLALRVEKLDLTDA------IDRA 67 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHHHh-----cCCcceEEEeeCCCH------HHHH
Confidence 468999999999999999999998764 444432 212222222111 223688899999988 6666
Q ss_pred HHhc-CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeecee
Q 042694 188 VIAK-EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~-~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v 244 (554)
.... ++|+|||+|+.... .+.++..+++|+.|+..+.+.+ .+ .+.+++|++||...
T Consensus 68 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~~SS~~~ 135 (257)
T PRK09291 68 QAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVA-RGKGKVVFTSSMAG 135 (257)
T ss_pred HHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCceEEEEcChhh
Confidence 6655 89999999986432 2456778899999987776644 33 34579999998643
No 135
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.37 E-value=1.6e-11 Score=120.49 Aligned_cols=116 Identities=18% Similarity=0.242 Sum_probs=87.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.+++++|||||+|++|+.++++|++.|. +|+++++.. +. . ...++..+++|++++ +..+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~---~v~~~~~~~---~~-~--------~~~~~~~~~~D~~~~------~~~~ 64 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGA---KVIGFDQAF---LT-Q--------EDYPFATFVLDVSDA------AAVA 64 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecch---hh-h--------cCCceEEEEecCCCH------HHHH
Confidence 4578999999999999999999999876 445544332 11 1 234678899999987 6666
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
.+.+ .+|+|||+|+.... .+.++..+++|+.++..+++.+... .+..+++++||...
T Consensus 65 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~ 138 (252)
T PRK08220 65 QVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA 138 (252)
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh
Confidence 6654 48999999997542 3467889999999999999988531 23457999999754
No 136
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.37 E-value=2.4e-11 Score=119.10 Aligned_cols=117 Identities=17% Similarity=0.204 Sum_probs=82.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
|+|+||||||++|++++++|++.|.+ |+++++. ..+.+... ...++..+.+|++++ +....
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~---V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~~~------~~i~~ 63 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHK---VIATGRRQERLQELKDE--------LGDNLYIAQLDVRNR------AAIEE 63 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCHHHHHHHHHH--------hccceEEEEecCCCH------HHHHH
Confidence 57999999999999999999998764 4544432 12222221 123688899999987 65554
Q ss_pred Hhc-------CccEEEEcCCCCC--------chhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 189 IAK-------EVDVIVNSAANTT--------FDERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~--------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
+.+ ++|+|||+|+... ..+.++..+++|+.|+..+++.+... .+..+++++||...
T Consensus 64 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 137 (248)
T PRK10538 64 MLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG 137 (248)
T ss_pred HHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCccc
Confidence 443 6999999998631 13467788999999977766665321 35678999999754
No 137
>PRK05717 oxidoreductase; Validated
Probab=99.36 E-value=1.1e-11 Score=122.11 Aligned_cols=123 Identities=11% Similarity=0.080 Sum_probs=86.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||+|+||++++++|++.+. +|++++... .+..+... ....++.++.+|++++ +...
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~---~v~~~~~~~-~~~~~~~~-----~~~~~~~~~~~Dl~~~------~~~~ 72 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGW---QVVLADLDR-ERGSKVAK-----ALGENAWFIAMDVADE------AQVA 72 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCC---EEEEEcCCH-HHHHHHHH-----HcCCceEEEEccCCCH------HHHH
Confidence 5789999999999999999999999875 556554321 11111110 0124678899999987 5443
Q ss_pred HHh-------cCccEEEEcCCCCCc---------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceec
Q 042694 188 VIA-------KEVDVIVNSAANTTF---------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVN 245 (554)
Q Consensus 188 ~l~-------~~vdiViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~ 245 (554)
.+. ..+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..++|++||....
T Consensus 73 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~ 148 (255)
T PRK05717 73 AGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR 148 (255)
T ss_pred HHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc
Confidence 332 258999999997532 2356788999999999999999642 223579999987543
No 138
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.36 E-value=2.6e-11 Score=118.45 Aligned_cols=122 Identities=11% Similarity=0.113 Sum_probs=85.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+|+||||||+||.++++.|+++|. +|+++++.. .+.+.+... .....++..+++|++++ ++.+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~---~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~------~~~~ 67 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGA---RLYLAARDVERLERLADDLR----ARGAVAVSTHELDILDT------ASHA 67 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCC---EEEEEeCCHHHHHHHHHHHH----HhcCCeEEEEecCCCCh------HHHH
Confidence 47899999999999999999999876 455554321 111111110 01234788999999987 6665
Q ss_pred HHhc----CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 188 VIAK----EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~----~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
.+.+ .+|+|||+|+.... .+.+....++|+.|+.++++.+... .+..+++++||...
T Consensus 68 ~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 138 (243)
T PRK07102 68 AFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAG 138 (243)
T ss_pred HHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccc
Confidence 5544 57999999986432 2345678899999999999887642 24578999998643
No 139
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.35 E-value=2.6e-11 Score=118.74 Aligned_cols=117 Identities=14% Similarity=0.205 Sum_probs=84.0
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++|+||||+|+||++++++|++.+. +|+++.+.. .+.+.+. ...++..+++|+++. ++.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~---~v~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~------~~~ 67 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA---RVAITGRDPASLEAARAE--------LGESALVIRADAGDV------AAQ 67 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCCHHHHHHHHHH--------hCCceEEEEecCCCH------HHH
Confidence 578999999999999999999999875 455554321 2222221 124677899999887 544
Q ss_pred HHHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeec
Q 042694 187 DVIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTA 242 (554)
Q Consensus 187 ~~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~ 242 (554)
..+. ..+|+|||+|+...+ .+.++..+++|+.|+..+++.+... .+..+++++||.
T Consensus 68 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~ 138 (249)
T PRK06500 68 KALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSI 138 (249)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEech
Confidence 4333 368999999997543 2467788999999999999999742 233467777764
No 140
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.35 E-value=2.7e-11 Score=118.62 Aligned_cols=125 Identities=14% Similarity=0.149 Sum_probs=90.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|+||||+|+||++++++|++.|. +|+++.+...+.+.+.... ...++..+.+|++++ ++..
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~vi~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~~ 68 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGA---DIVGAGRSEPSETQQQVEA-----LGRRFLSLTADLSDI------EAIK 68 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCchHHHHHHHHHh-----cCCceEEEECCCCCH------HHHH
Confidence 4689999999999999999999999876 4555544322222222111 234688999999988 6655
Q ss_pred HHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeeceecc
Q 042694 188 VIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAYVNG 246 (554)
Q Consensus 188 ~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~v~~ 246 (554)
.+. .++|+|||+|+.... .+.++..+++|+.++..+++.+... .+ ..++|++||...+.
T Consensus 69 ~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 145 (248)
T TIGR01832 69 ALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ 145 (248)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc
Confidence 443 369999999987532 2467788999999999999988532 12 45899999986654
No 141
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.35 E-value=3.1e-11 Score=117.71 Aligned_cols=118 Identities=12% Similarity=0.090 Sum_probs=84.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+++|+||||||+||++++++|++.|. +|+++++.. +++.+... ...++.++.+|++++ ++.+.+
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~---~V~~~~r~~-~~~~~~~~------~~~~~~~~~~D~~~~------~~~~~~ 64 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGW---QVIACGRNQ-SVLDELHT------QSANIFTLAFDVTDH------PGTKAA 64 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCC---EEEEEECCH-HHHHHHHH------hcCCCeEEEeeCCCH------HHHHHH
Confidence 36899999999999999999998876 455554321 22222111 124678899999987 776666
Q ss_pred hcC----ccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeece
Q 042694 190 AKE----VDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAY 243 (554)
Q Consensus 190 ~~~----vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~ 243 (554)
.++ +|+++|+|+...+ .+.++...++|+.|+.++++.+... .+-.+++++||..
T Consensus 65 ~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~ 130 (240)
T PRK06101 65 LSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIA 130 (240)
T ss_pred HHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechh
Confidence 653 6899999985432 2346788999999999999998752 2335788888854
No 142
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.35 E-value=4.4e-11 Score=122.44 Aligned_cols=125 Identities=17% Similarity=0.206 Sum_probs=86.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||+.++++|++.|. +|+++.+. ..+.+.++... ...++..+.+|++++ ++
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~---~Vvl~~R~~~~l~~~~~~l~~-----~g~~~~~v~~Dv~d~------~~ 71 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGA---KVVLLARGEEGLEALAAEIRA-----AGGEALAVVADVADA------EA 71 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHH-----cCCcEEEEEecCCCH------HH
Confidence 4578999999999999999999999876 45544432 22222222111 234688899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~ 246 (554)
.+.+.+ .+|++||+|+...+ .+.++..+++|+.|+.++.+.+.. + .+..++|++||...+.
T Consensus 72 v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~ 149 (334)
T PRK07109 72 VQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR 149 (334)
T ss_pred HHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc
Confidence 665543 69999999996432 245678888998887766555532 1 2356899999987654
No 143
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.35 E-value=2.4e-11 Score=121.16 Aligned_cols=116 Identities=13% Similarity=0.120 Sum_probs=82.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+++|+||||||+||++++++|.+.|. +|+++.+.. +.+.+.. ..++..+.+|++++ ++.+.+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~---~Vi~~~r~~-~~~~~l~--------~~~~~~~~~Dl~d~------~~~~~~ 65 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGW---RVFATCRKE-EDVAALE--------AEGLEAFQLDYAEP------ESIAAL 65 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH-HHHHHHH--------HCCceEEEccCCCH------HHHHHH
Confidence 57899999999999999999998775 455554321 1222111 12567899999987 555444
Q ss_pred hc--------CccEEEEcCCCCCc-------hhhHHHHHHHhchH----HHHHHHHHHHcCCCceEEEEeecee
Q 042694 190 AK--------EVDVIVNSAANTTF-------DERYDIAIDINTRG----PCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 190 ~~--------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~g----t~~ll~la~~~~~~k~~v~vST~~v 244 (554)
.+ .+|+|||+|+.... .+.++..+++|+.| ++.++..+++ .+..++|++||.+.
T Consensus 66 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~-~~~g~iv~isS~~~ 138 (277)
T PRK05993 66 VAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRK-QGQGRIVQCSSILG 138 (277)
T ss_pred HHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhh-cCCCEEEEECChhh
Confidence 32 58999999986432 24567889999999 6666666666 35679999999644
No 144
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.34 E-value=3.7e-11 Score=116.74 Aligned_cols=121 Identities=19% Similarity=0.236 Sum_probs=84.2
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc-
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK- 191 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~- 191 (554)
|+||||+|+||+++++.|+++++ +|+++.+...+.+...... . .....++..+.+|++++ +.++.+.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~---~v~~~~r~~~~~~~~~~~~-~-~~~~~~~~~~~~D~~~~------~~~~~~~~~ 69 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA---KVIITYRSSEEGAEEVVEE-L-KAYGVKALGVVCDVSDR------EDVKAVVEE 69 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCchhHHHHHHHH-H-HhcCCceEEEEecCCCH------HHHHHHHHH
Confidence 58999999999999999999876 4555543211221111100 0 00123578899999987 65555543
Q ss_pred ------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 192 ------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 192 ------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
.+|+|||+|+.... .+.++...+.|+.++..+++.+... .+.++|+++||...
T Consensus 70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~ 138 (239)
T TIGR01830 70 IEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVG 138 (239)
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccc
Confidence 47999999997542 2456788999999999999988642 24568999999644
No 145
>PRK08324 short chain dehydrogenase; Validated
Probab=99.34 E-value=1.4e-11 Score=137.89 Aligned_cols=231 Identities=15% Similarity=0.164 Sum_probs=139.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+++|+||||+|+||+++++.|++.|. +|++++... .+.+...... ..++..+.+|++++ +.
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga---~Vvl~~r~~~~~~~~~~~l~~------~~~v~~v~~Dvtd~------~~ 484 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGA---CVVLADLDEEAAEAAAAELGG------PDRALGVACDVTDE------AA 484 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcC---EEEEEeCCHHHHHHHHHHHhc------cCcEEEEEecCCCH------HH
Confidence 4679999999999999999999998775 566654322 2222222111 14788999999987 65
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCC-ceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKL-KLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~-k~~v~vST~~v~~~ 247 (554)
...+.+ ++|+|||+||.... .+.++..+++|+.|+..+++.+... .+. .+||++||......
T Consensus 485 v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~ 564 (681)
T PRK08324 485 VQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP 564 (681)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC
Confidence 555443 68999999996432 3467788999999999998877532 122 68999999755332
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEcccee
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVI 324 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V 324 (554)
.. .. . .|..+|...+.+++... ...|+++.+++|+.|
T Consensus 565 ~~----------------------------~~------~------~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v 604 (681)
T PRK08324 565 GP----------------------------NF------G------AYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAV 604 (681)
T ss_pred CC----------------------------Cc------H------HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCcee
Confidence 11 00 0 23333444444444332 234799999999999
Q ss_pred e-ecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 E-STCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~-g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
+ ++.- .-+.|.........+ ....+.....+.....++++++|++++++.++.... ....+.+|++.++
T Consensus 605 ~~~t~~-~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~--~~~tG~~i~vdgG 674 (681)
T PRK08324 605 VRGSGI-WTGEWIEARAAAYGL----SEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLL--SKTTGAIITVDGG 674 (681)
T ss_pred ecCCcc-ccchhhhhhhhhccC----ChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccc--cCCcCCEEEECCC
Confidence 7 4321 001221110000000 000000011223334578999999999988764211 1234689999887
No 146
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.34 E-value=3.3e-11 Score=118.96 Aligned_cols=119 Identities=18% Similarity=0.102 Sum_probs=85.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+|+||||||+||+.++++|++.+. +|++++.. ..+.+.... ...++..+.+|+++. ++..
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~D~~~~------~~v~ 64 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGW---RVGAYDINEAGLAALAAEL-------GAGNAWTGALDVTDR------AAWD 64 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHh-------cCCceEEEEecCCCH------HHHH
Confidence 47899999999999999999999875 45555432 122222221 124788999999987 5555
Q ss_pred HHhc--------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 188 VIAK--------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~--------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
.+.+ ++|+|||+|+.... .+.++..+.+|+.|+..+++.+... .+..++|++||...
T Consensus 65 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 139 (260)
T PRK08267 65 AALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASA 139 (260)
T ss_pred HHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhh
Confidence 4433 57999999997542 2467889999999999999888531 23468999999744
No 147
>PRK06196 oxidoreductase; Provisional
Probab=99.34 E-value=1.4e-11 Score=125.25 Aligned_cols=120 Identities=13% Similarity=0.176 Sum_probs=83.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++|+||||||+||++++++|++.|.+ |+++.+. .+++.+... ...++..+.+|++++ ++.+
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~---Vv~~~R~-~~~~~~~~~------~l~~v~~~~~Dl~d~------~~v~ 87 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAH---VIVPARR-PDVAREALA------GIDGVEVVMLDLADL------ESVR 87 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCC-HHHHHHHHH------HhhhCeEEEccCCCH------HHHH
Confidence 46789999999999999999999998764 4544332 122222111 012477899999987 6665
Q ss_pred HHh-------cCccEEEEcCCCCCc-----hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeecee
Q 042694 188 VIA-------KEVDVIVNSAANTTF-----DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~-------~~vdiViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v 244 (554)
.+. .++|+|||+||.... .+.++..+++|+.|+..+.+.+ ++ .+..++|++||...
T Consensus 88 ~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~-~~~~~iV~vSS~~~ 159 (315)
T PRK06196 88 AFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAA-GAGARVVALSSAGH 159 (315)
T ss_pred HHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHh-cCCCeEEEECCHHh
Confidence 554 368999999996432 2356788999999976666544 33 23468999999743
No 148
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.33 E-value=5.2e-11 Score=116.56 Aligned_cols=123 Identities=14% Similarity=0.044 Sum_probs=85.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++++||||||+||++++++|++++. +|+++.+. ..+.+...... .....++..+.+|++++ ++..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~------~~~~ 69 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR---DLALCARRTDRLEELKAELLA---RYPGIKVAVAALDVNDH------DQVF 69 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHh---hCCCceEEEEEcCCCCH------HHHH
Confidence 57899999999999999999999875 45544332 12222221111 00134788999999987 5555
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
.+.+ .+|+|||+||.... .+.++...++|+.|+..+++.+... .+..++|++||...
T Consensus 70 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 143 (248)
T PRK08251 70 EVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSA 143 (248)
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccc
Confidence 4433 68999999986432 2456678899999999988877421 35678999999654
No 149
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.33 E-value=3.6e-11 Score=118.58 Aligned_cols=124 Identities=18% Similarity=0.227 Sum_probs=88.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc-chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN-AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~-~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++++||||||||+||+.+++.|++.|..| +++. +...+.+.+.... ...++.++.+|++++ +..
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v---~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~i 78 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADI---IITTHGTNWDETRRLIEK-----EGRKVTFVQVDLTKP------ESA 78 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEE---EEEeCCcHHHHHHHHHHh-----cCCceEEEEcCCCCH------HHH
Confidence 468999999999999999999999987643 3332 2222333332211 234688999999987 666
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
..+++ .+|++||+|+.... .+.++..+++|+.++..+.+.+... .+..+++++||...+
T Consensus 79 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 154 (258)
T PRK06935 79 EKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSF 154 (258)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhc
Confidence 65554 68999999997532 3467788999999988887776531 245689999997654
No 150
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.33 E-value=8.3e-11 Score=120.03 Aligned_cols=201 Identities=16% Similarity=0.179 Sum_probs=126.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||.||++++++|++.|.+ |+++.+ +..+.+.++... ...++.++.+|++++ ++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~---Vvl~~R~~~~l~~~~~~~~~-----~g~~~~~~~~Dv~d~------~~ 70 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGAR---LVLAARDEEALQAVAEECRA-----LGAEVLVVPTDVTDA------DQ 70 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHHHHHHHHHHh-----cCCcEEEEEeeCCCH------HH
Confidence 35789999999999999999999998864 454433 222222222111 234677899999987 66
Q ss_pred HHHHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecccc
Q 042694 186 ADVIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~ 248 (554)
.+.+. ..+|++||+|+...+ .+.++...++|+.|+.++.+.+... .+...+|++||...+...
T Consensus 71 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~ 150 (330)
T PRK06139 71 VKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ 150 (330)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC
Confidence 66665 368999999986432 2456788999999999988776421 234589999886543221
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCch----HHHHHHHhhhhhcCCCcEEEEcccee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDG----EVAQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k----~~ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
|... .|..+| .+++.+..+.....++.++.+.|+.|
T Consensus 151 ----------------------------p~~~------------~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v 190 (330)
T PRK06139 151 ----------------------------PYAA------------AYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFM 190 (330)
T ss_pred ----------------------------CCch------------hHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCc
Confidence 1111 122233 25566655543334899999999998
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHH
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQ 383 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~ 383 (554)
..+.. .+..+. . +. . ......+...+++|++++.++..
T Consensus 191 ~T~~~----~~~~~~--~-------~~-~-------~~~~~~~~~pe~vA~~il~~~~~ 228 (330)
T PRK06139 191 DTPGF----RHGANY--T-------GR-R-------LTPPPPVYDPRRVAKAVVRLADR 228 (330)
T ss_pred cCccc----cccccc--c-------cc-c-------ccCCCCCCCHHHHHHHHHHHHhC
Confidence 55322 111110 0 00 0 00112356889999999988764
No 151
>PRK08643 acetoin reductase; Validated
Probab=99.32 E-value=6.1e-11 Score=116.68 Aligned_cols=121 Identities=17% Similarity=0.220 Sum_probs=84.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+++||||+|+||+++++.|++.|. +|+++++. ..+.+...... ...++.++.+|++++ +..+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~---~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~~~ 67 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF---KVAIVDYNEETAQAAADKLSK-----DGGKAIAVKADVSDR------DQVF 67 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCeEEEEECCCCCH------HHHH
Confidence 57899999999999999999999875 45555432 12222222111 134678899999998 5555
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeecee
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v 244 (554)
.+.+ ++|+|||+|+.... .+.++..+++|+.|+..+++.+... +...+++++||...
T Consensus 68 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 142 (256)
T PRK08643 68 AAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG 142 (256)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccc
Confidence 5443 68999999986432 2456788999999998887777542 12347899998643
No 152
>PLN02253 xanthoxin dehydrogenase
Probab=99.32 E-value=3.4e-11 Score=120.22 Aligned_cols=122 Identities=19% Similarity=0.189 Sum_probs=87.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+++||||+|+||++++++|++.|. +|++++.. ..+.+.+... ...++..+++|++++ +.
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~---~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~------~~ 80 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGA---KVCIVDLQDDLGQNVCDSLG------GEPNVCFFHCDVTVE------DD 80 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhc------CCCceEEEEeecCCH------HH
Confidence 4688999999999999999999999876 45555432 2222222221 124688999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc---------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF---------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
.+.+.+ ++|+|||+||.... .+.++...++|+.|+..+++.+... .+..+++++||...
T Consensus 81 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~ 158 (280)
T PLN02253 81 VSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVAS 158 (280)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhh
Confidence 665554 69999999997531 2467889999999999999877642 12347888887644
No 153
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.32 E-value=5.9e-11 Score=116.63 Aligned_cols=122 Identities=17% Similarity=0.209 Sum_probs=86.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+++||||||.||.+++++|++.|.+ |++..+. ..+.+.+.... ...++..+.+|++++ +.
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~------~~ 72 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQ---VAIAARHLDALEKLADEIGT-----SGGKVVPVCCDVSQH------QQ 72 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCHHHHHHHHHHHHh-----cCCeEEEEEccCCCH------HH
Confidence 46899999999999999999999998864 4544332 22222222111 124678899999987 65
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c-CC--CceEEEEeece
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C-NK--LKLFVQVSTAY 243 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~-~~--~k~~v~vST~~ 243 (554)
.+.+.+ .+|++||+|+.... .+.++..+++|+.|+..+++.+.. + ++ -.+++++||.+
T Consensus 73 ~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~ 148 (253)
T PRK05867 73 VTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMS 148 (253)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHH
Confidence 555443 79999999997543 245678889999999999998854 2 11 23688888764
No 154
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.7e-10 Score=114.07 Aligned_cols=121 Identities=17% Similarity=0.276 Sum_probs=86.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++|+||||+|+||+.++++|++.|.+ |+++++. ..+.+..... ...++..+.+|++++ +..
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~D~~d~------~~~ 68 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGAR---LLLVGRNAEKLEALAARLP------YPGRHRWVVADLTSE------AGR 68 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCHHHHHHHHHHHh------cCCceEEEEccCCCH------HHH
Confidence 5789999999999999999999998864 5554432 1222222210 234788999999987 555
Q ss_pred HHHh------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 187 DVIA------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 187 ~~l~------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
..+. ..+|+|||+||...+ .+.++...++|+.|+.++++.+... .+..+++++||...
T Consensus 69 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~ 142 (263)
T PRK09072 69 EAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFG 142 (263)
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhh
Confidence 5443 368999999997643 2456788899999999999888542 23457888888644
No 155
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.31 E-value=4.9e-11 Score=117.47 Aligned_cols=124 Identities=17% Similarity=0.176 Sum_probs=87.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||++++++|++.+. +|+++.+. ..+.+..... ....++..+.+|++++ ++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~---~Vi~~~r~~~~~~~~~~~l~-----~~~~~~~~~~~D~~~~------~~ 72 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA---KVVLASRRVERLKELRAEIE-----AEGGAAHVVSLDVTDY------QS 72 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHH-----hcCCcEEEEEecCCCH------HH
Confidence 4679999999999999999999998775 45555432 1222222211 0124688899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC--------CceEEEEe
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK--------LKLFVQVS 240 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~--------~k~~v~vS 240 (554)
...+.+ .+|+|||+|+.... .+.++..+++|+.|+..+++.+... .. ..+++++|
T Consensus 73 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~s 152 (258)
T PRK06949 73 IKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIA 152 (258)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEEC
Confidence 665554 58999999996432 2467788999999999999877531 11 24899999
Q ss_pred eceec
Q 042694 241 TAYVN 245 (554)
Q Consensus 241 T~~v~ 245 (554)
|....
T Consensus 153 S~~~~ 157 (258)
T PRK06949 153 SVAGL 157 (258)
T ss_pred ccccc
Confidence 87553
No 156
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.31 E-value=5.7e-11 Score=119.29 Aligned_cols=220 Identities=14% Similarity=0.112 Sum_probs=134.6
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
..++++||||||+|+||.++++.|++.|.+ |+++... ..+.+...... ...++.++.+|+++.
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~---V~l~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------ 108 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGAD---IAIVYLDEHEDANETKQRVEK-----EGVKCLLIPGDVSDE------ 108 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcchHHHHHHHHHHh-----cCCeEEEEEccCCCH------
Confidence 356889999999999999999999998764 4444321 11222221110 234688899999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceeccc
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~ 247 (554)
+..+.+++ ++|+|||+|+.... .+.+...+++|+.|+.++++.+... ....++|++||...+..
T Consensus 109 ~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~ 188 (290)
T PRK06701 109 AFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEG 188 (290)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCC
Confidence 55555543 68999999986422 2356788999999999999998752 23358999999876543
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEccce
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPSV 323 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~~ 323 (554)
..+ .. .|..+|. +++.++.... ..|+++..+|||.
T Consensus 189 ~~~----------------------------~~------------~Y~~sK~a~~~l~~~la~~~~-~~gIrv~~i~pG~ 227 (290)
T PRK06701 189 NET----------------------------LI------------DYSATKGAIHAFTRSLAQSLV-QKGIRVNAVAPGP 227 (290)
T ss_pred CCC----------------------------cc------------hhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCC
Confidence 210 00 1222222 3333333322 2489999999999
Q ss_pred eeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 324 IESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 324 V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
|..+... .... ......+. .......+..++|++++++.++..... ...+.++++.++
T Consensus 228 v~T~~~~---~~~~-----~~~~~~~~---------~~~~~~~~~~~~dva~~~~~ll~~~~~--~~~G~~i~idgg 285 (290)
T PRK06701 228 IWTPLIP---SDFD-----EEKVSQFG---------SNTPMQRPGQPEELAPAYVFLASPDSS--YITGQMLHVNGG 285 (290)
T ss_pred CCCcccc---cccC-----HHHHHHHH---------hcCCcCCCcCHHHHHHHHHHHcCcccC--CccCcEEEeCCC
Confidence 8664321 1000 00000000 001123577889999999887765321 123567777665
No 157
>PRK08264 short chain dehydrogenase; Validated
Probab=99.30 E-value=9.6e-11 Score=113.93 Aligned_cols=120 Identities=20% Similarity=0.263 Sum_probs=88.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++|+||||||++|+++++.|++.+. .+|+++.+.. +++.+ ...++.++.+|++++ +.+..
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~-~~~~~---------~~~~~~~~~~D~~~~------~~~~~ 66 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDP-ESVTD---------LGPRVVPLQLDVTDP------ASVAA 66 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecCh-hhhhh---------cCCceEEEEecCCCH------HHHHH
Confidence 568999999999999999999999875 2345444321 12211 124788899999987 67666
Q ss_pred Hhc---CccEEEEcCCC-CC-------chhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 189 IAK---EVDVIVNSAAN-TT-------FDERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 189 l~~---~vdiViH~AA~-v~-------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
+.+ .+|+|||+|+. .. ..+.+....++|+.++..+++++... .+..+|+++||...+.
T Consensus 67 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~ 138 (238)
T PRK08264 67 AAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV 138 (238)
T ss_pred HHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc
Confidence 665 58999999987 21 13567788999999999999987531 2456899999976543
No 158
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.30 E-value=2e-11 Score=119.30 Aligned_cols=123 Identities=14% Similarity=0.066 Sum_probs=82.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEE-EcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFI-INAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~-~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
+++|+||||||+||++++++|++.+.+| ++ ..+. .+...+.... ......++..+.+|++++ +..+.
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v---~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~D~~d~------~~i~~ 68 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTV---AVNYQQN-LHAAQEVVNL--ITQAGGKAFVLQADISDE------NQVVA 68 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEE---EEEeCCC-hHHHHHHHHH--HHhCCCeEEEEEccCCCH------HHHHH
Confidence 3689999999999999999999988654 32 2221 1222111110 000123578899999988 66665
Q ss_pred Hhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc------CCCceEEEEeecee
Q 042694 189 IAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC------NKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~------~~~k~~v~vST~~v 244 (554)
+.+ .+|+|||+|+.... .+.++...++|+.|+..+++.+... .+..+||++||...
T Consensus 69 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~ 145 (247)
T PRK09730 69 MFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAAS 145 (247)
T ss_pred HHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhh
Confidence 544 57899999986421 2356788999999998888766442 11246999999754
No 159
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.30 E-value=1.6e-10 Score=112.65 Aligned_cols=216 Identities=14% Similarity=0.126 Sum_probs=129.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
++|+||||+|+||+++++.|++.+. +|+++++...+..++.... ......++.++.+|+.++ +....+.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~---~vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~------~~v~~~~ 71 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY---RVIATYFSGNDCAKDWFEE--YGFTEDQVRLKELDVTDT------EECAEAL 71 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCcHHHHHHHHHH--hhccCCeEEEEEcCCCCH------HHHHHHH
Confidence 5899999999999999999998775 5666543211212111100 001234688999999987 5554443
Q ss_pred c-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeeceeccccccee
Q 042694 191 K-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYVNGQRRGKV 252 (554)
Q Consensus 191 ~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v~~~~~~~i 252 (554)
+ .+|+|||+|+.... .+.++...++|+.|+.++.+.+ ++ .+..+||++||...+....
T Consensus 72 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~iss~~~~~~~~--- 147 (245)
T PRK12824 72 AEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCE-QGYGRIINISSVNGLKGQF--- 147 (245)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-hCCeEEEEECChhhccCCC---
Confidence 3 58999999987531 3457788999999998886544 43 3567999999975543211
Q ss_pred eccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchH----HHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 253 MEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGE----VAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 253 ~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~----~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
... .|..+|. +++.++.... ..++++.+++|+.+.++.
T Consensus 148 -------------------------~~~------------~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~ 189 (245)
T PRK12824 148 -------------------------GQT------------NYSAAKAGMIGFTKALASEGA-RYGITVNCIAPGYIATPM 189 (245)
T ss_pred -------------------------CCh------------HHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEEcccCCcc
Confidence 000 1222222 3344443322 347999999999987643
Q ss_pred cCCcc-ccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFS-GWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~-g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..... .+.. . +. .. .....+..++++++++..++..... .-.++++++.++
T Consensus 190 ~~~~~~~~~~------~----~~-~~--------~~~~~~~~~~~va~~~~~l~~~~~~--~~~G~~~~~~~g 241 (245)
T PRK12824 190 VEQMGPEVLQ------S----IV-NQ--------IPMKRLGTPEEIAAAVAFLVSEAAG--FITGETISINGG 241 (245)
T ss_pred hhhcCHHHHH------H----HH-hc--------CCCCCCCCHHHHHHHHHHHcCcccc--CccCcEEEECCC
Confidence 32111 0000 0 00 00 0112355778999998777643221 224678888876
No 160
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.2e-10 Score=114.84 Aligned_cols=227 Identities=16% Similarity=0.133 Sum_probs=134.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||++++++|++.+.. +|+++++.. ...+..... ....++..+.+|++++ +.
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~--~V~~~~r~~~~~~~~~~~l~-----~~~~~~~~~~~D~~~~------~~ 70 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAA--GLVICGRNAEKGEAQAAELE-----ALGAKAVFVQADLSDV------ED 70 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHHHH-----hcCCeEEEEEccCCCH------HH
Confidence 46789999999999999999999987753 366665421 111111111 1234678899999987 65
Q ss_pred HHHHhc-------CccEEEEcCCCCC-------chhhHHHHHHHhchHHHHHHHHHHHcC----CCceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTT-------FDERYDIAIDINTRGPCRLMEFAKQCN----KLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~~~~----~~k~~v~vST~~v~~~ 247 (554)
...+++ .+|+|||+|+... -.+.++...++|+.|+.++++.+.+.- ...++|++||...++.
T Consensus 71 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~ 150 (260)
T PRK06198 71 CRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG 150 (260)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC
Confidence 555543 5899999998643 134567789999999999998875421 1247999999866543
Q ss_pred ccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEcccee
Q 042694 248 RRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVI 324 (554)
Q Consensus 248 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V 324 (554)
.. ... .|..+|...+.+++... ...++.++.++|+.+
T Consensus 151 ~~----------------------------~~~------------~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~ 190 (260)
T PRK06198 151 QP----------------------------FLA------------AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWM 190 (260)
T ss_pred CC----------------------------Ccc------------hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccc
Confidence 21 000 22233333333333221 134799999999998
Q ss_pred eecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 325 ESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 325 ~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
.++.......-..+ ........ ... ......+++++++++++..++.... +...++++.+.++
T Consensus 191 ~t~~~~~~~~~~~~--~~~~~~~~-~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~--~~~~G~~~~~~~~ 253 (260)
T PRK06198 191 ATEGEDRIQREFHG--APDDWLEK-AAA--------TQPFGRLLDPDEVARAVAFLLSDES--GLMTGSVIDFDQS 253 (260)
T ss_pred cCcchhhhhhhccC--CChHHHHH-Hhc--------cCCccCCcCHHHHHHHHHHHcChhh--CCccCceEeECCc
Confidence 77542110000000 00000000 000 0011346789999999998765432 1234578877765
No 161
>PRK07985 oxidoreductase; Provisional
Probab=99.29 E-value=8e-11 Score=118.43 Aligned_cols=125 Identities=18% Similarity=0.151 Sum_probs=88.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc----hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA----ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~----~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.++++++||||+|+||++++++|++.|.+ |++... ...+.+.+... ....++..+.+|++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~---Vi~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~------ 112 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGAD---VAISYLPVEEEDAQDVKKIIE-----ECGRKAVLLPGDLSDE------ 112 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCE---EEEecCCcchhhHHHHHHHHH-----HcCCeEEEEEccCCCH------
Confidence 56789999999999999999999998864 444431 11222222111 1234677899999987
Q ss_pred HHHHHHh-------cCccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecc
Q 042694 184 DLADVIA-------KEVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 184 ~~~~~l~-------~~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~ 246 (554)
+....+. ..+|++||+|+... + .+.++..+++|+.|+..+++.+... ..-.++|++||...+.
T Consensus 113 ~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~ 191 (294)
T PRK07985 113 KFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ 191 (294)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc
Confidence 5554443 35899999998632 1 2467889999999999999988652 2235899999976643
No 162
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.29 E-value=1.6e-10 Score=113.80 Aligned_cols=229 Identities=13% Similarity=0.142 Sum_probs=129.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++++|+||||+|+||.+++++|++.|.+| -+++.+. ...+.+.+.... . .....++..+++|++++ +..
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~v-v~i~~~~~~~~~~~~~~~~~-l-~~~~~~~~~~~~D~~~~------~~~ 76 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKA-VAIHYNSAASKADAEETVAA-V-KAAGAKAVAFQADLTTA------AAV 76 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcE-EEEecCCccchHHHHHHHHH-H-HHhCCcEEEEecCcCCH------HHH
Confidence 457899999999999999999999987653 1222111 111111111100 0 00124678899999988 666
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeeceecccccce
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAYVNGQRRGK 251 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~v~~~~~~~ 251 (554)
+.+.+ ++|++||+|+.... .+.++...++|+.|+..+++.+.. +....++++++|..+.....
T Consensus 77 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~-- 154 (257)
T PRK12744 77 EKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP-- 154 (257)
T ss_pred HHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCC--
Confidence 55543 68999999997421 235778899999999999998864 22234677664433221110
Q ss_pred eeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh---hcCCCcEEEEccceeeecc
Q 042694 252 VMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL---ERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 252 i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~---~~~glp~~I~Rp~~V~g~~ 328 (554)
.. . .|..+|...+.+.+... ...|+++.+++||.+..+.
T Consensus 155 --------------------------~~------~------~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~ 196 (257)
T PRK12744 155 --------------------------FY------S------AYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF 196 (257)
T ss_pred --------------------------Cc------c------cchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence 00 0 34444443444433332 1247999999999996643
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
..+.... .. .. ....... ..+-....+.+++|+++++..++.. .. .-.+.++++.++
T Consensus 197 ~~~~~~~-------~~-~~-~~~~~~~---~~~~~~~~~~~~~dva~~~~~l~~~-~~--~~~g~~~~~~gg 253 (257)
T PRK12744 197 FYPQEGA-------EA-VA-YHKTAAA---LSPFSKTGLTDIEDIVPFIRFLVTD-GW--WITGQTILINGG 253 (257)
T ss_pred hcccccc-------ch-hh-ccccccc---ccccccCCCCCHHHHHHHHHHhhcc-cc--eeecceEeecCC
Confidence 2211000 00 00 0000000 0011112477889999999888763 21 112468887765
No 163
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.29 E-value=2.5e-10 Score=112.26 Aligned_cols=122 Identities=11% Similarity=0.069 Sum_probs=81.4
Q ss_pred cCcEEEEecccccccHHHHHHHHhhC-CCccEEEEEcch--h-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTV-PDVGKIFIINAE--L-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~~~--~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
++++|+||||||.||++++++|++.+ . +|+++.+. . .+.+.++... ....+++.+++|++++ +
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~---~V~~~~r~~~~~~~~~~~~l~~----~~~~~v~~~~~D~~~~------~ 73 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPA---RVVLAALPDDPRRDAAVAQMKA----AGASSVEVIDFDALDT------D 73 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCC---eEEEEeCCcchhHHHHHHHHHh----cCCCceEEEEecCCCh------H
Confidence 57899999999999999999999875 4 45554322 1 2223222211 1123688999999987 4
Q ss_pred HHHHHh------cCccEEEEcCCCCCch-------hhHHHHHHHhchHHHHH----HHHHHHcCCCceEEEEeecee
Q 042694 185 LADVIA------KEVDVIVNSAANTTFD-------ERYDIAIDINTRGPCRL----MEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 185 ~~~~l~------~~vdiViH~AA~v~~~-------~~~~~~~~~Nv~gt~~l----l~la~~~~~~k~~v~vST~~v 244 (554)
+...+. .++|++||++|..... +...+.+++|+.|+..+ +.++++ .+..+++++||...
T Consensus 74 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~-~~~~~iv~isS~~g 149 (253)
T PRK07904 74 SHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA-QGFGQIIAMSSVAG 149 (253)
T ss_pred HHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh-cCCceEEEEechhh
Confidence 433332 2799999999875321 12235689999988764 555554 35679999999753
No 164
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.29 E-value=1e-10 Score=114.35 Aligned_cols=125 Identities=17% Similarity=0.146 Sum_probs=83.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|+++||||||+||++++++|++.|.. +++.......+..+.... ......++..+.+|+++. ++...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~---vv~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~------~~~~~ 70 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFK---VVAGCGPNSPRRVKWLED--QKALGFDFIASEGNVGDW------DSTKA 70 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCE---EEEEcCCChHHHHHHHHH--HHhcCCcEEEEEcCCCCH------HHHHH
Confidence 4689999999999999999999998763 444321111111111100 000234677889999987 55554
Q ss_pred Hhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeecee
Q 042694 189 IAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v 244 (554)
+.+ ++|+|||+|+.... .+.++...++|+.|+..+.+.+.. + .+..+++++||...
T Consensus 71 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 143 (246)
T PRK12938 71 AFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNG 143 (246)
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhc
Confidence 443 68999999997531 346788899999997776665543 1 34568999999654
No 165
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.29 E-value=9.2e-11 Score=115.31 Aligned_cols=125 Identities=15% Similarity=0.160 Sum_probs=87.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.+++++|||||+|+||++++++|++.|. +|++.++.. +.+.+...+ . .....++..+.+|++++ +..+
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~---~vvl~~r~~-~~~~~~~~~-l-~~~~~~~~~~~~Dl~~~------~~~~ 74 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGA---EIIINDITA-ERAELAVAK-L-RQEGIKAHAAPFNVTHK------QEVE 74 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCC---EEEEEcCCH-HHHHHHHHH-H-HhcCCeEEEEecCCCCH------HHHH
Confidence 3678999999999999999999999876 455554321 122211100 0 00124677899999988 6655
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
.+.+ .+|+|||+|+.... .+.++...++|+.|+..+++.+... .+..++|++||...
T Consensus 75 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 148 (254)
T PRK08085 75 AAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS 148 (254)
T ss_pred HHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh
Confidence 5543 58999999996432 3567789999999999888877642 23468999998643
No 166
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.28 E-value=1.6e-10 Score=113.34 Aligned_cols=216 Identities=17% Similarity=0.170 Sum_probs=128.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++++||||+|+||..+++.|++.+. +|++++... +++...... . .....++..+.+|++++ +..+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~---~vi~~~r~~-~~~~~~~~~-~-~~~~~~~~~~~~D~~~~------~~~~ 70 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGA---KLALIDLNQ-EKLEEAVAE-C-GALGTEVRGYAANVTDE------EDVE 70 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHHH-H-HhcCCceEEEEcCCCCH------HHHH
Confidence 3578999999999999999999998775 455554331 222211110 0 00234678899999887 4444
Q ss_pred HHhc-------CccEEEEcCCCCCc----------------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEe
Q 042694 188 VIAK-------EVDVIVNSAANTTF----------------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVS 240 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~----------------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vS 240 (554)
.+.+ .+|+|||+|+.... .+.+....++|+.|+..+.+.+... ..-..++++|
T Consensus 71 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~s 150 (253)
T PRK08217 71 ATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINIS 150 (253)
T ss_pred HHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 4333 57999999985321 2456678889999998877655421 1224689999
Q ss_pred eceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHH----HHHHhhhhhcCCCcE
Q 042694 241 TAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVA----QKMKGLGLERGDIPV 316 (554)
Q Consensus 241 T~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~a----e~l~e~~~~~~glp~ 316 (554)
|...++... .. .|..+|... +.++... ...++++
T Consensus 151 s~~~~~~~~-----------------------------~~------------~Y~~sK~a~~~l~~~la~~~-~~~~i~v 188 (253)
T PRK08217 151 SIARAGNMG-----------------------------QT------------NYSASKAGVAAMTVTWAKEL-ARYGIRV 188 (253)
T ss_pred cccccCCCC-----------------------------Cc------------hhHHHHHHHHHHHHHHHHHH-HHcCcEE
Confidence 875543210 00 222333322 3333322 2358999
Q ss_pred EEEccceeeecccCCc-cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEE
Q 042694 317 VIIRPSVIESTCKEPF-SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVY 395 (554)
Q Consensus 317 ~I~Rp~~V~g~~~~p~-~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vy 395 (554)
+.++|+.|.++..... +.... . ... ..+ ...+.+++++++++..++.... ..+.+|
T Consensus 189 ~~v~pg~v~t~~~~~~~~~~~~------~----~~~-~~~--------~~~~~~~~~~a~~~~~l~~~~~----~~g~~~ 245 (253)
T PRK08217 189 AAIAPGVIETEMTAAMKPEALE------R----LEK-MIP--------VGRLGEPEEIAHTVRFIIENDY----VTGRVL 245 (253)
T ss_pred EEEeeCCCcCccccccCHHHHH------H----HHh-cCC--------cCCCcCHHHHHHHHHHHHcCCC----cCCcEE
Confidence 9999999976433211 11000 0 000 000 1235688999999988875322 235799
Q ss_pred EeeCC
Q 042694 396 QIASS 400 (554)
Q Consensus 396 n~~~~ 400 (554)
++.++
T Consensus 246 ~~~gg 250 (253)
T PRK08217 246 EIDGG 250 (253)
T ss_pred EeCCC
Confidence 98876
No 167
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.28 E-value=8.1e-11 Score=116.43 Aligned_cols=123 Identities=14% Similarity=0.101 Sum_probs=88.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||+++++.|++.|. +|+++++. ..+.+.+.... ...++..+.+|++++ +.
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~---~Vi~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~------~~ 73 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGA---DVLIAARTESQLDEVAEQIRA-----AGRRAHVVAADLAHP------EA 73 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HH
Confidence 4678999999999999999999999775 45555432 12222222111 134688899999987 65
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v 244 (554)
...+.+ ++|+|||+|+.... .+.++...++|+.|+..+++.+... .+..++|++||...
T Consensus 74 ~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~ 150 (263)
T PRK07814 74 TAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMG 150 (263)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccc
Confidence 554443 68999999986432 2467888999999999999998641 24568999998643
No 168
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.28 E-value=1.2e-10 Score=114.92 Aligned_cols=125 Identities=15% Similarity=0.194 Sum_probs=88.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+|+||||+|+||+++++.|++.|. +|+++++ +..+.+.+.... .....++..+.+|++++ ++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~---~vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~------~~ 72 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGA---AVALADLDAALAERAAAAIAR---DVAGARVLAVPADVTDA------AS 72 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh---ccCCceEEEEEccCCCH------HH
Confidence 4688999999999999999999999876 4555443 222222222110 00134688899999988 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v 244 (554)
...+.+ .+|++||+|+...+ .+.++..+++|+.|+..+++.+.. + .+..++|++||...
T Consensus 73 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 148 (260)
T PRK07063 73 VAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHA 148 (260)
T ss_pred HHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhh
Confidence 665554 69999999996432 346788899999999999888753 1 23468999999754
No 169
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.27 E-value=1.3e-10 Score=114.19 Aligned_cols=124 Identities=16% Similarity=0.169 Sum_probs=83.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEE--cc-hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII--NA-ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~--~~-~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|+++||||+|+||++++++|++.|.. |.+. +. +..+.+...... ...++..+..|+++. +
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~ 67 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGAL---VAIHYGNRKEEAEETVYEIQS-----NGGSAFSIGANLESL------H 67 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCe---EEEEcCCCHHHHHHHHHHHHh-----cCCceEEEecccCCH------H
Confidence 35789999999999999999999998864 3333 22 211222111110 123567889999876 3
Q ss_pred HHH----HHh---------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeece
Q 042694 185 LAD----VIA---------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAY 243 (554)
Q Consensus 185 ~~~----~l~---------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~ 243 (554)
... .+. ..+|++||+||.... .+.++..+++|+.|+..+++.+.. +.+-.++|++||..
T Consensus 68 ~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~ 147 (252)
T PRK12747 68 GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 147 (252)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence 222 221 169999999996421 234678889999999999988764 22335899999986
Q ss_pred ec
Q 042694 244 VN 245 (554)
Q Consensus 244 v~ 245 (554)
..
T Consensus 148 ~~ 149 (252)
T PRK12747 148 TR 149 (252)
T ss_pred cc
Confidence 53
No 170
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.27 E-value=1.8e-10 Score=113.30 Aligned_cols=121 Identities=17% Similarity=0.228 Sum_probs=87.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++++|+||||+|+||.++++.|++.|. +|+++.+. ......... ...++..+.+|++++ ++.
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~---~Vi~~~r~~~~~~~~~~~-------~~~~~~~~~~Dl~~~------~~~ 76 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGA---RVALLDRSEDVAEVAAQL-------LGGNAKGLVCDVSDS------QSV 76 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHh-------hCCceEEEEecCCCH------HHH
Confidence 4688999999999999999999998875 45544432 111111111 124567899999987 655
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
+.+.+ ++|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..+||++||...
T Consensus 77 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 151 (255)
T PRK06841 77 EAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAG 151 (255)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhh
Confidence 55543 68999999997542 2356778999999999999988642 24568999999754
No 171
>PRK08017 oxidoreductase; Provisional
Probab=99.27 E-value=1.8e-10 Score=113.35 Aligned_cols=115 Identities=10% Similarity=0.065 Sum_probs=78.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
++|+||||||++|+++++.|++.+.+ |+++.+.. +++.... ..++..+.+|+.++ +....+.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~---v~~~~r~~-~~~~~~~--------~~~~~~~~~D~~~~------~~~~~~~ 64 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYR---VLAACRKP-DDVARMN--------SLGFTGILLDLDDP------ESVERAA 64 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCH-HHhHHHH--------hCCCeEEEeecCCH------HHHHHHH
Confidence 57999999999999999999988764 44443321 2222111 12467789999876 4433322
Q ss_pred --------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHH----HHHHHHcCCCceEEEEeecee
Q 042694 191 --------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRL----MEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 191 --------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~l----l~la~~~~~~k~~v~vST~~v 244 (554)
..+|.|+|+||.... .+.++...++|+.|+.++ ++.+++ .+.++++++||.+.
T Consensus 65 ~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~~~~~iv~~ss~~~ 136 (256)
T PRK08017 65 DEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLP-HGEGRIVMTSSVMG 136 (256)
T ss_pred HHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh-cCCCEEEEEcCccc
Confidence 357999999986432 245778899999998876 454444 35678999999744
No 172
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.27 E-value=1.3e-10 Score=114.09 Aligned_cols=125 Identities=14% Similarity=0.143 Sum_probs=89.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+++||||||.||+.++++|++.|.+ |+++.....+.+.+.... ...++.++.+|++++ ++.+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~---vv~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~~~ 71 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGAD---IVGVGVAEAPETQAQVEA-----LGRKFHFITADLIQQ------KDID 71 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEecCchHHHHHHHHHH-----cCCeEEEEEeCCCCH------HHHH
Confidence 46899999999999999999999998864 454443222222222111 234788999999988 6666
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CC-CceEEEEeeceecc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NK-LKLFVQVSTAYVNG 246 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~-~k~~v~vST~~v~~ 246 (554)
.+.+ .+|++||+|+.... .+.++..+++|+.|+..+.+.+.. + .+ -.++|++||...+.
T Consensus 72 ~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~ 148 (251)
T PRK12481 72 SIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ 148 (251)
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC
Confidence 6654 58999999997542 256788899999999988887754 2 11 35899999976543
No 173
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.26 E-value=1e-10 Score=118.40 Aligned_cols=125 Identities=14% Similarity=0.058 Sum_probs=85.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||++++++|++.|. +|+++.+. ..+...+.... .....++..+.+|+++. ++
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~---~vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~------~~ 81 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGA---HVVLAVRNLDKGKAAAARITA---ATPGADVTLQELDLTSL------AS 81 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHH---hCCCCceEEEECCCCCH------HH
Confidence 4679999999999999999999999876 44444321 11111111110 00124678899999988 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-----hhhHHHHHHHhchH----HHHHHHHHHHcCCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-----DERYDIAIDINTRG----PCRLMEFAKQCNKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-----~~~~~~~~~~Nv~g----t~~ll~la~~~~~~k~~v~vST~~v~ 245 (554)
.+.+++ ++|+|||+||.... .+.++..+++|+.| +..+++.+++. +..++|++||....
T Consensus 82 v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~ 156 (306)
T PRK06197 82 VRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSSGGHR 156 (306)
T ss_pred HHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECCHHHh
Confidence 555543 58999999996432 23567788999999 66666666552 45799999998643
No 174
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.26 E-value=6.6e-11 Score=115.84 Aligned_cols=122 Identities=16% Similarity=0.053 Sum_probs=81.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+|+||||||+||+.+++.|++.+.+| +.+.++. ..+.+.+.... ...++..+++|++++ ++.+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~~~ 68 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSV--GINYARDAAAAEETADAVRA-----AGGRACVVAGDVANE------ADVI 68 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEE--EEEeCCCHHHHHHHHHHHHh-----cCCcEEEEEeccCCH------HHHH
Confidence 4689999999999999999999987643 2222221 11112111111 234788999999987 5554
Q ss_pred HHh-------cCccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHH-HcCC-----CceEEEEeecee
Q 042694 188 VIA-------KEVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAK-QCNK-----LKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~-------~~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~-~~~~-----~k~~v~vST~~v 244 (554)
.+. ..+|+|||+|+.... .+.++..+++|+.|+..+++.+. .+.. -.++|++||...
T Consensus 69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~ 146 (248)
T PRK06947 69 AMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIAS 146 (248)
T ss_pred HHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhh
Confidence 443 269999999986421 23567789999999988875443 3311 135999998654
No 175
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.26 E-value=1.9e-10 Score=113.23 Aligned_cols=122 Identities=21% Similarity=0.217 Sum_probs=83.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+++||||+|+||+++++.|++.|.+ |+++.....+..++.. ..++.++.+|++++ +..+
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~---v~~~~~~~~~~~~~l~--------~~~~~~~~~Dl~~~------~~~~ 67 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAK---VAVLYNSAENEAKELR--------EKGVFTIKCDVGNR------DQVK 67 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCcHHHHHHHH--------hCCCeEEEecCCCH------HHHH
Confidence 45789999999999999999999998864 4443221112221111 11467899999987 6665
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceecc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~ 246 (554)
.+.+ ++|+|||+|+.... .+.++..+++|+.|+..+.+.+.. + .+..++|++||...++
T Consensus 68 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~ 143 (255)
T PRK06463 68 KSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIG 143 (255)
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCC
Confidence 5543 68999999987431 245778899999997665544432 1 2456899999976543
No 176
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.26 E-value=1.8e-10 Score=114.92 Aligned_cols=125 Identities=16% Similarity=0.241 Sum_probs=86.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++||||+|+||++++++|++.|. +|+++++. ..+.+.+.... ...++.++.+|++++ ++
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~ 73 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGA---KVAILDRNQEKAEAVVAEIKA-----AGGEALAVKADVLDK------ES 73 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCeEEEEECCCCCH------HH
Confidence 4678999999999999999999998876 45555432 12222221111 124688899999987 55
Q ss_pred HHHHhc-------CccEEEEcCCCCCc----------------------hhhHHHHHHHhchHHHHHHHHHHH-c--CCC
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF----------------------DERYDIAIDINTRGPCRLMEFAKQ-C--NKL 233 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~----------------------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~ 233 (554)
...+.+ .+|++||+|+.... .+.++..+++|+.++..+++.+.. + .+.
T Consensus 74 v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 153 (278)
T PRK08277 74 LEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKG 153 (278)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 554433 78999999995321 245778899999999877766543 1 234
Q ss_pred ceEEEEeeceecc
Q 042694 234 KLFVQVSTAYVNG 246 (554)
Q Consensus 234 k~~v~vST~~v~~ 246 (554)
.++|++||...+.
T Consensus 154 g~ii~isS~~~~~ 166 (278)
T PRK08277 154 GNIINISSMNAFT 166 (278)
T ss_pred cEEEEEccchhcC
Confidence 6899999976643
No 177
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.26 E-value=1.9e-10 Score=113.14 Aligned_cols=124 Identities=15% Similarity=0.102 Sum_probs=86.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++||||||.||.++++.|++.|. +|+++.+ +..+.+.+.... ...++..+.+|++++ +.
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~---~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~ 69 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGA---KVVVGARRQAELDQLVAEIRA-----EGGEAVALAGDVRDE------AY 69 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEcCCCCH------HH
Confidence 3578999999999999999999999876 4555543 222222222111 124678899999987 65
Q ss_pred HHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
.+.+.+ .+|++||+|+.... .+.++..+++|+.|+..+.+.+... .+..++|++||...+
T Consensus 70 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~ 147 (254)
T PRK07478 70 AKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGH 147 (254)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhh
Confidence 555543 68999999997431 1457788999999888776655421 234579999997543
No 178
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.26 E-value=1.8e-10 Score=114.68 Aligned_cols=117 Identities=11% Similarity=0.103 Sum_probs=83.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|+||||||++|+++++.|++.|. +|+++++.. +.+.... ..++..+.+|++++ +..+.+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~-~~~~~~~--------~~~~~~~~~Dl~~~------~~~~~~ 62 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGY---EVWATARKA-EDVEALA--------AAGFTAVQLDVNDG------AALARL 62 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHH--------HCCCeEEEeeCCCH------HHHHHH
Confidence 46899999999999999999998775 455554321 1222111 12456789999987 666555
Q ss_pred h-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeecee
Q 042694 190 A-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYV 244 (554)
Q Consensus 190 ~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v 244 (554)
. .++|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..++|++||...
T Consensus 63 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~ 133 (274)
T PRK05693 63 AEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSG 133 (274)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccc
Confidence 4 368999999996432 2567788999999999999887531 13357889888654
No 179
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.26 E-value=1.9e-10 Score=113.68 Aligned_cols=123 Identities=20% Similarity=0.220 Sum_probs=86.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+++++++||||||+||+.+++.|++.|. +|+++.+.. .....+... ....++..+.+|++++ ++.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~---~Vv~~~r~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~------~~v 69 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGA---NLILLDISPEIEKLADELC-----GRGHRCTAVVADVRDP------ASV 69 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEecCCHHHHHHHHHHH-----HhCCceEEEECCCCCH------HHH
Confidence 3578999999999999999999999876 455554321 111111110 0124678899999987 666
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
+.+.+ .+|+|||+|+.... .+.++..+++|+.|+..+++.+... .+..+++++||...
T Consensus 70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 144 (263)
T PRK08226 70 AAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTG 144 (263)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence 65544 68999999997433 2356678999999999999887531 23468999998643
No 180
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.25 E-value=2.2e-10 Score=115.98 Aligned_cols=123 Identities=24% Similarity=0.238 Sum_probs=87.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++++++||||+|+||++++++|++.|. +|++.+.. ..+.+.+.... ...++..+.+|++++ +
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga---~Vv~~~~~~~~~~~~~~~~i~~-----~g~~~~~~~~Dv~d~------~ 75 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGA---TVVVNDVASALDASDVLDEIRA-----AGAKAVAVAGDISQR------A 75 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCchhHHHHHHHHHHh-----cCCeEEEEeCCCCCH------H
Confidence 5789999999999999999999999876 44544321 11222221110 234788999999987 6
Q ss_pred HHHHHhc------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-C-C--------CceEEEEee
Q 042694 185 LADVIAK------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-N-K--------LKLFVQVST 241 (554)
Q Consensus 185 ~~~~l~~------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-~--------~k~~v~vST 241 (554)
....+.+ .+|++||+|+.... .+.++..+++|+.|+..+++.+... . + -.++|++||
T Consensus 76 ~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS 155 (306)
T PRK07792 76 TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSS 155 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECC
Confidence 6665543 68999999997542 3467888999999999999887531 0 0 137899988
Q ss_pred cee
Q 042694 242 AYV 244 (554)
Q Consensus 242 ~~v 244 (554)
...
T Consensus 156 ~~~ 158 (306)
T PRK07792 156 EAG 158 (306)
T ss_pred ccc
Confidence 654
No 181
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.25 E-value=2.1e-10 Score=112.70 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=88.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++++||||+|.||++++++|++.|.+ |+.++...-+...+.... ...++..+.+|++++ ++.+
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~---vv~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~~~ 73 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCD---IVGINIVEPTETIEQVTA-----LGRRFLSLTADLRKI------DGIP 73 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEecCcchHHHHHHHHh-----cCCeEEEEECCCCCH------HHHH
Confidence 46789999999999999999999998764 444432211111111110 134678899999987 6665
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-cC---CCceEEEEeeceecc
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-CN---KLKLFVQVSTAYVNG 246 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~~---~~k~~v~vST~~v~~ 246 (554)
.+.+ .+|++||+||.... .+.++..+++|+.|+..+++.+.. +. .-.++|++||...+.
T Consensus 74 ~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 150 (253)
T PRK08993 74 ALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ 150 (253)
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc
Confidence 5553 68999999997542 256888999999999999988754 21 124799999986544
No 182
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.25 E-value=2.5e-10 Score=113.42 Aligned_cols=221 Identities=20% Similarity=0.188 Sum_probs=143.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
++|+|||||||+|++++++|++++++| ++..-+......+ . ..+.+..+|+.++ ..+....
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v-~~~~r~~~~~~~~-----------~-~~v~~~~~d~~~~------~~l~~a~ 61 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEV-RAAVRNPEAAAAL-----------A-GGVEVVLGDLRDP------KSLVAGA 61 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEE-EEEEeCHHHHHhh-----------c-CCcEEEEeccCCH------hHHHHHh
Confidence 479999999999999999999987655 2222222221111 1 4788999999999 8899999
Q ss_pred cCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcccccccc
Q 042694 191 KEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVS 270 (554)
Q Consensus 191 ~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~ 270 (554)
++++.++++.+... .+. ........+..+..+.+. .+.++++++|...+.....
T Consensus 62 ~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~--~~~~~~~~~s~~~~~~~~~--------------------- 115 (275)
T COG0702 62 KGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLGADAASP--------------------- 115 (275)
T ss_pred ccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc--CCceEEEEeccCCCCCCCc---------------------
Confidence 99999999998765 333 223344444444444444 2577888888765432110
Q ss_pred cccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeec
Q 042694 271 NSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYG 350 (554)
Q Consensus 271 ~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~ 350 (554)
. . +.-++...|......|++.+++||+.++....... .. ....
T Consensus 116 ---------------~------~----~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~---~~---------~~~~ 158 (275)
T COG0702 116 ---------------S------A----LARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAF---IE---------AAEA 158 (275)
T ss_pred ---------------c------H----HHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhH---HH---------HHHh
Confidence 0 1 11223444555556799999999777655333211 10 0001
Q ss_pred cceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 351 KGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 351 ~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
.+.. .. ..+......+.++|++.++..+...+. ..+++|.++++ ...+..+..+.+.+..+++
T Consensus 159 ~~~~-~~-~~~~~~~~~i~~~d~a~~~~~~l~~~~----~~~~~~~l~g~--~~~~~~~~~~~l~~~~gr~ 221 (275)
T COG0702 159 AGLP-VI-PRGIGRLSPIAVDDVAEALAAALDAPA----TAGRTYELAGP--EALTLAELASGLDYTIGRP 221 (275)
T ss_pred hCCc-ee-cCCCCceeeeEHHHHHHHHHHHhcCCc----ccCcEEEccCC--ceecHHHHHHHHHHHhCCc
Confidence 1111 01 122336789999999999887765433 23589999998 7899999999999999875
No 183
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.25 E-value=2.2e-10 Score=113.16 Aligned_cols=120 Identities=14% Similarity=0.183 Sum_probs=88.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++||||||.||++++++|++.|. +|+++++.. .+.+.+. ...++.++.+|++++ ++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~~~------~~ 66 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGA---RVAIVDIDADNGAAVAAS--------LGERARFIATDITDD------AA 66 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHH--------hCCeeEEEEecCCCH------HH
Confidence 3578999999999999999999999886 455554321 2222222 134688999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCC------chhhHHHHHHHhchHHHHHHHHHHH-c-CCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTT------FDERYDIAIDINTRGPCRLMEFAKQ-C-NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~------~~~~~~~~~~~Nv~gt~~ll~la~~-~-~~~k~~v~vST~~v 244 (554)
...+++ .+|++||+|+... ..+.++..+++|+.|+..+++.+.. + .+-.++|++||...
T Consensus 67 ~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~ 140 (261)
T PRK08265 67 IERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISA 140 (261)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence 655543 6899999998642 1356788899999999999988764 2 23358999998654
No 184
>PRK07069 short chain dehydrogenase; Validated
Probab=99.25 E-value=1.3e-10 Score=113.87 Aligned_cols=122 Identities=17% Similarity=0.273 Sum_probs=83.4
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
+|+||||+|+||+++++.|++.|. +|+++++. ..+.+.+..... .....+..+.+|++++ +.++.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~---~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~------~~~~~ 68 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA---KVFLTDINDAAGLDAFAAEINAA---HGEGVAFAAVQDVTDE------AQWQA 68 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCcchHHHHHHHHHHhc---CCCceEEEEEeecCCH------HHHHH
Confidence 389999999999999999999876 45555432 222222221110 0112345688999987 66555
Q ss_pred Hhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhch----HHHHHHHHHHHcCCCceEEEEeeceecc
Q 042694 189 IAK-------EVDVIVNSAANTTF-------DERYDIAIDINTR----GPCRLMEFAKQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~----gt~~ll~la~~~~~~k~~v~vST~~v~~ 246 (554)
+.+ .+|+|||+|+.... .+.+...+++|+. +++.+++.+++ .+.++++++||...+.
T Consensus 69 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~ii~~ss~~~~~ 143 (251)
T PRK07069 69 LLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRA-SQPASIVNISSVAAFK 143 (251)
T ss_pred HHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh-cCCcEEEEecChhhcc
Confidence 443 68999999997643 2356778889998 77777777776 3567999999976644
No 185
>PRK12743 oxidoreductase; Provisional
Probab=99.25 E-value=1.7e-10 Score=113.66 Aligned_cols=120 Identities=14% Similarity=0.056 Sum_probs=85.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+++|+||||||+||.+++++|++.|.. |+++ ++ +..+.+.+.... ...++..+.+|++++ +..
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~---V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~~ 67 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD---IGITWHSDEEGAKETAEEVRS-----HGVRAEIRQLDLSDL------PEG 67 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCChHHHHHHHHHHHh-----cCCceEEEEccCCCH------HHH
Confidence 578999999999999999999998864 4433 22 222222222111 234788899999988 655
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcC----CCceEEEEeece
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCN----KLKLFVQVSTAY 243 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~----~~k~~v~vST~~ 243 (554)
+.+.+ .+|+|||+|+.... .+.++..+.+|+.|+..+++.+...- +-.++|++||..
T Consensus 68 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~ 142 (256)
T PRK12743 68 AQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVH 142 (256)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecc
Confidence 54443 58999999987442 24678889999999999999886521 124899999864
No 186
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.25 E-value=1.4e-10 Score=113.48 Aligned_cols=127 Identities=12% Similarity=0.063 Sum_probs=86.0
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
..++++|+||||||+||.+++++|++.|. +|+++++. ..+.+.+.... ....++.++.+|+...+ ++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~---~Vi~~~r~~~~~~~~~~~l~~----~~~~~~~~~~~d~~~~~----~~ 77 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA---TVILLGRTEEKLEAVYDEIEA----AGGPQPAIIPLDLLTAT----PQ 77 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---cEEEEeCCHHHHHHHHHHHHh----cCCCCceEEEecccCCC----HH
Confidence 46789999999999999999999999775 45555432 22233222211 12246677888886321 13
Q ss_pred HHHHHh-------cCccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 185 LADVIA-------KEVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 185 ~~~~l~-------~~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
+...+. ..+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..+|+++||...
T Consensus 78 ~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~ 155 (247)
T PRK08945 78 NYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVG 155 (247)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhh
Confidence 333322 368999999986432 2467889999999998888877421 35678999999643
No 187
>PRK12742 oxidoreductase; Provisional
Probab=99.24 E-value=1.8e-10 Score=111.85 Aligned_cols=121 Identities=12% Similarity=0.160 Sum_probs=82.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++|+||||+|+||++++++|++.+.+ |++......+.+.+.... .++..+.+|++++ +.+.
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~---v~~~~~~~~~~~~~l~~~-------~~~~~~~~D~~~~------~~~~ 67 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGAN---VRFTYAGSKDAAERLAQE-------TGATAVQTDSADR------DAVI 67 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCCHHHHHHHHHH-------hCCeEEecCCCCH------HHHH
Confidence 45789999999999999999999988764 444322111222211100 1245678999876 4444
Q ss_pred HHhc---CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeecee
Q 042694 188 VIAK---EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~---~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~v 244 (554)
.+.+ .+|++||+|+.... .+.++...++|+.|+..+++.+.. +..-.++|++||...
T Consensus 68 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 68 DVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred HHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 4443 58999999987432 245788999999999999766554 333468999999643
No 188
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.24 E-value=1.8e-10 Score=113.14 Aligned_cols=121 Identities=13% Similarity=0.199 Sum_probs=85.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+++||||+|.||+++++.|++.|. +|++.++.. .+.+.+.... ...++..+.+|++++ +..+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~---~Vi~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~~ 66 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA---NVVITGRTKEKLEEAKLEIEQ-----FPGQVLTVQMDVRNP------EDVQ 66 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEecCCCH------HHHH
Confidence 57899999999999999999999775 566554321 2222221111 124788999999987 6665
Q ss_pred HHhc-------CccEEEEcCCCCC---c----hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeecee
Q 042694 188 VIAK-------EVDVIVNSAANTT---F----DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~---~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~v 244 (554)
.+.+ .+|+|||+|+... + .+.++..+++|+.|+.++++.+... .+ ..+++++||.+.
T Consensus 67 ~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~ 141 (252)
T PRK07677 67 KMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYA 141 (252)
T ss_pred HHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhh
Confidence 5443 6899999998522 1 2456788999999999999988531 12 358999998754
No 189
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.24 E-value=2.1e-10 Score=112.83 Aligned_cols=123 Identities=13% Similarity=0.154 Sum_probs=86.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||+|+||++++++|++.+.. +++.+. +..+.+...... ...++..+.+|++++ ++
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~---vv~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~------~~ 74 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGAS---VVVSDINADAANHVVDEIQQ-----LGGQAFACRCDITSE------QE 74 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HH
Confidence 45899999999999999999999998754 444432 222222221110 124677889999987 55
Q ss_pred HHHHh-------cCccEEEEcCCCCCc------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 186 ADVIA-------KEVDVIVNSAANTTF------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~-------~~vdiViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
...+. ..+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+..++|++||...
T Consensus 75 i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 149 (255)
T PRK06113 75 LSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA 149 (255)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccc
Confidence 54433 268999999997532 2567778999999999999998631 23358999999754
No 190
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.24 E-value=2.7e-10 Score=112.36 Aligned_cols=117 Identities=15% Similarity=0.200 Sum_probs=84.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++++|+||||||+||++++++|.+.|. +|+++.+..-+ . ...++.++.+|++++ +..+
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~r~~~~----~--------~~~~~~~~~~D~~~~------~~~~ 65 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGA---RVVTTARSRPD----D--------LPEGVEFVAADLTTA------EGCA 65 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCC---EEEEEeCChhh----h--------cCCceeEEecCCCCH------HHHH
Confidence 5689999999999999999999998775 45555432111 0 124678899999987 5544
Q ss_pred HHh-------cCccEEEEcCCCCC---------chhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 188 VIA-------KEVDVIVNSAANTT---------FDERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 188 ~l~-------~~vdiViH~AA~v~---------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
.+. ..+|+|||+|+... -.+.++..+++|+.|+..+.+.+... .+..++|++||....
T Consensus 66 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~ 142 (260)
T PRK06523 66 AVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRR 142 (260)
T ss_pred HHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEeccccc
Confidence 333 36899999998532 13467888999999998887765421 234589999997543
No 191
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.23 E-value=2.7e-10 Score=111.80 Aligned_cols=120 Identities=11% Similarity=0.176 Sum_probs=83.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++++|+||||+|+||++++++|++.|.+ |++. ++. .+.+...... ...++..+.+|++++ ++..
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~---vv~~~~~~-~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~~ 68 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGAR---VVVNYHQS-EDAAEALADE-----LGDRAIALQADVTDR------EQVQ 68 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCe---EEEEcCCC-HHHHHHHHHH-----hCCceEEEEcCCCCH------HHHH
Confidence 5689999999999999999999998864 3333 321 1222111110 124788899999987 5555
Q ss_pred HHhc-------C-ccEEEEcCCCCC---------c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeece
Q 042694 188 VIAK-------E-VDVIVNSAANTT---------F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAY 243 (554)
Q Consensus 188 ~l~~-------~-vdiViH~AA~v~---------~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~ 243 (554)
.+.+ . +|+|||+|+... + .+.+...+++|+.|+..+++.+... .+..+++++||..
T Consensus 69 ~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~ 148 (253)
T PRK08642 69 AMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNL 148 (253)
T ss_pred HHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcc
Confidence 5543 2 999999997521 1 2456788999999999999998631 2346899999853
No 192
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.23 E-value=1.7e-10 Score=112.59 Aligned_cols=119 Identities=16% Similarity=0.143 Sum_probs=82.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+++|+||||||+||++++++|++.|. +|+++.+.....+.. ....++..+.+|++++ ++.+.+
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~---~v~~~~r~~~~~~~~--------~~~~~~~~~~~D~~~~------~~~~~~ 63 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI---AVLGVARSRHPSLAA--------AAGERLAEVELDLSDA------AAAAAW 63 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC---EEEEEecCcchhhhh--------ccCCeEEEEEeccCCH------HHHHHH
Confidence 36899999999999999999998775 444444321111111 1234788899999987 555542
Q ss_pred h-----------cCccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 190 A-----------KEVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 190 ~-----------~~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
. ..+|++||+|+.... .+.++..+++|+.|+..+.+.+.+. .+..++|++||...+
T Consensus 64 ~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 141 (243)
T PRK07023 64 LAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR 141 (243)
T ss_pred HHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc
Confidence 2 158999999997542 2456788999999977776665432 234689999997543
No 193
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.23 E-value=3e-10 Score=111.73 Aligned_cols=123 Identities=11% Similarity=0.125 Sum_probs=88.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||+|+||+.+++.|++.|. +|+++++. ..+.+.+.... ...++..+.+|++++ ++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~---~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~ 74 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGA---HVLVNGRNAATLEAAVAALRA-----AGGAAEALAFDIADE------EA 74 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC---eEEEEeCCHHHHHHHHHHHHh-----cCCceEEEEccCCCH------HH
Confidence 5689999999999999999999998775 56665432 12222221111 234688999999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v 244 (554)
...+.+ .+|+|||+|+.... .+.++....+|+.|+..+.+.+.+ + .+..++|++||...
T Consensus 75 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 150 (256)
T PRK06124 75 VAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAG 150 (256)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechh
Confidence 555443 57999999997432 246778899999999999977753 1 24578999999754
No 194
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.22 E-value=3.5e-10 Score=111.25 Aligned_cols=117 Identities=11% Similarity=0.080 Sum_probs=81.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||++++++|++.+. +|++++... .+.+.+.. +...+.+|++++ +.
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~---~v~~~~r~~~~~~~~~~~~----------~~~~~~~D~~~~------~~ 65 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGA---TVVVGDIDPEAGKAAADEV----------GGLFVPTDVTDE------DA 65 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHc----------CCcEEEeeCCCH------HH
Confidence 5689999999999999999999999876 455544321 12222211 114688999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc---------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeece
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF---------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAY 243 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~ 243 (554)
.+.+.+ ++|+|||+|+.... .+.++...++|+.|+..+++.+.. + .+..++|++||..
T Consensus 66 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~ 142 (255)
T PRK06057 66 VNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFV 142 (255)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchh
Confidence 655554 57999999986532 135778899999999888776642 1 2345789988853
No 195
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.22 E-value=2.6e-10 Score=112.17 Aligned_cols=123 Identities=14% Similarity=0.139 Sum_probs=86.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++++++||||+|+||++++++|++.|. +|+++++. ..+.+.+.... ...++..+.+|++++ +
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~---~v~~~~r~~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~------~ 71 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGA---DVALFDLRTDDGLAETAEHIEA-----AGRRAIQIAADVTSK------A 71 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCcchHHHHHHHHHHh-----cCCceEEEEcCCCCH------H
Confidence 4678999999999999999999999876 44554432 12222222111 134678899999987 5
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeecee
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYV 244 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v 244 (554)
....+.+ ++|+|||+|+.... .+.++..+++|+.|+..+++.+.. + .+..++|++||...
T Consensus 72 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 148 (254)
T PRK06114 72 DLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSG 148 (254)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence 5554443 57999999997542 246788899999999888777643 1 23468999998754
No 196
>PRK06398 aldose dehydrogenase; Validated
Probab=99.22 E-value=2.4e-10 Score=112.67 Aligned_cols=115 Identities=14% Similarity=0.232 Sum_probs=86.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+||||||+|+||++++++|++.|. +|+++.+.. . ...++..+.+|++++ ++.+
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~---~Vi~~~r~~-------~-------~~~~~~~~~~D~~~~------~~i~ 60 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGS---NVINFDIKE-------P-------SYNDVDYFKVDVSNK------EQVI 60 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCCc-------c-------ccCceEEEEccCCCH------HHHH
Confidence 4578999999999999999999999886 455554321 0 112678899999987 6655
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
.+.+ .+|+|||+|+.... .+.++..+++|+.|+..+++.+... .+..++|++||....
T Consensus 61 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 135 (258)
T PRK06398 61 KGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSF 135 (258)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhc
Confidence 5443 68999999986432 3467788999999999998887542 245689999997554
No 197
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.22 E-value=2.1e-10 Score=112.57 Aligned_cols=123 Identities=17% Similarity=0.189 Sum_probs=85.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||+|+||++++++|++.|. +|+.++.. ..+.+.+.... ...++..+++|+++. ++
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~---~Vi~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~ 71 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGA---HVIVSSRKLDGCQAVADAIVA-----AGGKAEALACHIGEM------EQ 71 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh-----cCCeEEEEEcCCCCH------HH
Confidence 4578999999999999999999999876 45555432 22222222111 123567889999987 55
Q ss_pred HHHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v 244 (554)
.+.+.+ .+|+|||+|+.... .+.++...++|+.|+..+++.+... .+..+++++||.+.
T Consensus 72 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 148 (252)
T PRK07035 72 IDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNG 148 (252)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhh
Confidence 554443 58999999986421 2456788999999998888776331 24568999998644
No 198
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.22 E-value=4.7e-10 Score=125.83 Aligned_cols=125 Identities=19% Similarity=0.222 Sum_probs=89.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++||||||+||++++++|++.|. +|+++.+. ..+.+.+.... ...++..+.+|++++ ++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~ 434 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGA---TVFLVARNGEALDELVAEIRA-----KGGTAHAYTCDLTDS------AA 434 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHh-----cCCcEEEEEecCCCH------HH
Confidence 4578999999999999999999999876 45555432 12222221111 134688999999988 66
Q ss_pred HHHHhc-------CccEEEEcCCCCC---c------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTT---F------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~---~------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~ 246 (554)
.+.+.+ .+|++||+|+... + .+.++..+++|+.|+.++++.+.. + .+..++|++||..++.
T Consensus 435 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 514 (657)
T PRK07201 435 VDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT 514 (657)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC
Confidence 665554 6899999999642 1 245778899999999888777642 1 2456899999987654
No 199
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.22 E-value=2.7e-10 Score=112.73 Aligned_cols=123 Identities=15% Similarity=0.168 Sum_probs=86.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++++|+||||+|+||++++++|++.|. +|+++++.. ...+.+.... ...++..+.+|++++ ++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~ 72 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA---NVAVASRSQEKVDAAVAQLQQ-----AGPEGLGVSADVRDY------AA 72 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHH-----hCCceEEEECCCCCH------HH
Confidence 4688999999999999999999998775 455554321 1122111111 123667899999987 65
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-C-CCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-N-KLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~-~~k~~v~vST~~v 244 (554)
.+.+.+ .+|+|||+|+.... .+.++..+++|+.|+.++++.+... . +-.+++++||...
T Consensus 73 i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~ 147 (264)
T PRK07576 73 VEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQA 147 (264)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhh
Confidence 655543 57999999975321 3467788999999999999988642 1 2248999999754
No 200
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.22 E-value=2.7e-10 Score=111.93 Aligned_cols=125 Identities=13% Similarity=0.143 Sum_probs=86.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||+|+||++++++|++.+. +|+++++. ..+++.+.... ...++..+.+|++++ +.
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~ 70 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGA---KVVVADRDAAGGEETVALIRE-----AGGEALFVACDVTRD------AE 70 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHh-----cCCceEEEEcCCCCH------HH
Confidence 4678999999999999999999998875 45555432 12222222111 234688999999987 55
Q ss_pred HHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~ 246 (554)
...+.+ .+|+|||+|+... + .+.++...++|+.++..+++.+.. + .+..+++++||...+.
T Consensus 71 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~ 149 (253)
T PRK06172 71 VKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG 149 (253)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc
Confidence 555443 5799999998632 2 246778899999999877765432 1 2346899999976543
No 201
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.22 E-value=2.2e-10 Score=111.60 Aligned_cols=122 Identities=15% Similarity=0.133 Sum_probs=81.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|++|||||||+||+++++.|++.+.. ++++.++..+++.+.... ......++..+.+|++++ +.++.+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~---v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~------~~~~~~~ 69 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYR---VAANCGPNEERAEAWLQE--QGALGFDFRVVEGDVSSF------ESCKAAV 69 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCHHHHHHHHHH--HHhhCCceEEEEecCCCH------HHHHHHH
Confidence 57999999999999999999998764 443322111222111100 001234788999999987 5554443
Q ss_pred -------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeecee
Q 042694 191 -------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 191 -------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v 244 (554)
..+|+|||+|+.... .+.++...++|+.++..+++.+ ++ .+..+++++||...
T Consensus 70 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~iss~~~ 140 (242)
T TIGR01829 70 AKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRE-RGWGRIINISSVNG 140 (242)
T ss_pred HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCcEEEEEcchhh
Confidence 358999999986531 2467788899999988765554 33 35678999998643
No 202
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.21 E-value=3.7e-10 Score=109.41 Aligned_cols=115 Identities=15% Similarity=0.127 Sum_probs=82.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|+|+||||||+||++++++|++.|. +|+++.+.... . . ...++.+|++++ +..+.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~---~v~~~~r~~~~----~--------~--~~~~~~~D~~~~------~~~~~ 58 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH---QVIGIARSAID----D--------F--PGELFACDLADI------EQTAA 58 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCccc----c--------c--CceEEEeeCCCH------HHHHH
Confidence 367899999999999999999999875 45555432111 0 1 114678999987 65555
Q ss_pred Hhc------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceecc
Q 042694 189 IAK------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 189 l~~------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~ 246 (554)
+.+ ++|+|||+|+.... .+.+...+++|+.|+.++.+.+... .+..++|++||...++
T Consensus 59 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 132 (234)
T PRK07577 59 TLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFG 132 (234)
T ss_pred HHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccC
Confidence 544 68999999997543 2456678899999988887776431 2457999999986543
No 203
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.21 E-value=4.8e-10 Score=110.40 Aligned_cols=124 Identities=15% Similarity=0.102 Sum_probs=85.7
Q ss_pred cCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEcch-----------hHHH--HHHHcCCchhhhccCcEEEEEcc
Q 042694 109 KAKNFFVTGATG--FLAKVLIEKILRTVPDVGKIFIINAE-----------LFKC--LKQTYGKSYQAFMLSKLVPAVGN 173 (554)
Q Consensus 109 ~~~~VlITGaTG--FlG~~Ll~~LL~~~~~V~~i~~~~~~-----------~~~~--l~~~~~~~~~~~~~~kv~~v~GD 173 (554)
++++|||||||| .||.+++++|++.|. +|+++.+. ..+. +..... ....+++.+.+|
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~---~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D 75 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGI---DIFFTYWSPYDKTMPWGMHDKEPVLLKEEIE-----SYGVRCEHMEID 75 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCC---cEEEEcCCccccccccccchhhHHHHHHHHH-----hcCCeEEEEECC
Confidence 578999999996 599999999999875 45555322 1111 111111 123468899999
Q ss_pred CCCCCCCCCHHHHHHHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceE
Q 042694 174 VCENNLGLEEDLADVIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLF 236 (554)
Q Consensus 174 l~~~~lGLs~~~~~~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~ 236 (554)
++++ ++...++ ..+|+|||+|+.... .+.++..+++|+.|+..+++.+... ....++
T Consensus 76 ~~~~------~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 149 (256)
T PRK12748 76 LSQP------YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRI 149 (256)
T ss_pred CCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEE
Confidence 9987 5544433 258999999986432 2356788999999999999888532 134589
Q ss_pred EEEeeceecc
Q 042694 237 VQVSTAYVNG 246 (554)
Q Consensus 237 v~vST~~v~~ 246 (554)
+++||...+.
T Consensus 150 v~~ss~~~~~ 159 (256)
T PRK12748 150 INLTSGQSLG 159 (256)
T ss_pred EEECCccccC
Confidence 9999875543
No 204
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=99.21 E-value=1.9e-11 Score=112.25 Aligned_cols=253 Identities=17% Similarity=0.182 Sum_probs=161.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
+..+||||||-|-||..+...|-. .+.-..|++.+- ++.... ..+.=-++..|+.+. ..+++
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~-~yGs~~VILSDI------~KPp~~-----V~~~GPyIy~DILD~------K~L~e 104 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRY-MYGSECVILSDI------VKPPAN-----VTDVGPYIYLDILDQ------KSLEE 104 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHH-HhCCccEehhhc------cCCchh-----hcccCCchhhhhhcc------ccHHH
Confidence 456899999999999998765544 333335554331 110000 111112356677665 44444
Q ss_pred Hh--cCccEEEEcCCCCCc--hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCcc
Q 042694 189 IA--KEVDVIVNSAANTTF--DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIA 264 (554)
Q Consensus 189 l~--~~vdiViH~AA~v~~--~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~ 264 (554)
+. ..+|..||..|..+- ..+...+.++|+.|..|++++|+++ +++-| .-||++++|+...
T Consensus 105 IVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iF-VPSTIGAFGPtSP-------------- 168 (366)
T KOG2774|consen 105 IVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVF-VPSTIGAFGPTSP-------------- 168 (366)
T ss_pred hhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEe-ecccccccCCCCC--------------
Confidence 44 479999998886543 2355678899999999999999995 77654 4799999987531
Q ss_pred cccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccc
Q 042694 265 KENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDP 344 (554)
Q Consensus 265 ~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~ 344 (554)
.+ +.|.+.+.. ....|+-+|.-||-+.|....+.|+..-.+|.+.++++.. |-.|-.|- ...-
T Consensus 169 -RN-------PTPdltIQR------PRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~-pgggttdy--a~A~ 231 (366)
T KOG2774|consen 169 -RN-------PTPDLTIQR------PRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATK-PGGGTTDY--AIAI 231 (366)
T ss_pred -CC-------CCCCeeeec------CceeechhHHHHHHHHHHHHhhcCccceecccCcccccCC-CCCCcchh--HHHH
Confidence 00 001111110 0015777888999999988888899999999888877433 22222221 1111
Q ss_pred eeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHh
Q 042694 345 IILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHY 418 (554)
Q Consensus 345 i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~ 418 (554)
.-.+..+|... .+-.|+....+++..||-.+++..+..+.. .-..++||+++- ..|-+|+++.+.+..
T Consensus 232 f~~Al~~gk~t-Cylrpdtrlpmmy~~dc~~~~~~~~~a~~~--~lkrr~ynvt~~---sftpee~~~~~~~~~ 299 (366)
T KOG2774|consen 232 FYDALQKGKHT-CYLRPDTRLPMMYDTDCMASVIQLLAADSQ--SLKRRTYNVTGF---SFTPEEIADAIRRVM 299 (366)
T ss_pred HHHHHHcCCcc-cccCCCccCceeehHHHHHHHHHHHhCCHH--Hhhhheeeecee---ccCHHHHHHHHHhhC
Confidence 11122345553 335688899999999999999887765433 223589999885 788899988887654
No 205
>PRK09242 tropinone reductase; Provisional
Probab=99.21 E-value=3.9e-10 Score=111.06 Aligned_cols=127 Identities=13% Similarity=0.223 Sum_probs=88.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+++||||+|.||+.++++|++.|.+ |+++.+. ..+.+.+.... .....++..+.+|++++ ++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~---v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~~~------~~ 74 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGAD---VLIVARDADALAQARDELAE---EFPEREVHGLAADVSDD------ED 74 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHHHh---hCCCCeEEEEECCCCCH------HH
Confidence 46899999999999999999999998864 4544322 12222221111 00124788999999987 55
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceecc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~ 246 (554)
...+.+ .+|+|||+|+.... .+.++..+.+|+.|+..+++.+.. + .+..+++++||.....
T Consensus 75 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~ 152 (257)
T PRK09242 75 RRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT 152 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC
Confidence 544433 68999999986321 356788999999999999988753 1 2456899999976544
No 206
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.20 E-value=4.7e-10 Score=110.20 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=87.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+++||||||+||+++++.|++.+. +|+++++..-. .. ...++..+.+|++++ ++.+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~---~v~~~~r~~~~---~~--------~~~~~~~~~~D~~~~------~~~~ 63 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGA---TVVVCGRRAPE---TV--------DGRPAEFHAADVRDP------DQVA 63 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCChhh---hh--------cCCceEEEEccCCCH------HHHH
Confidence 4679999999999999999999998775 45555433211 11 234678899999987 6666
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c---CCCceEEEEeeceec
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~---~~~k~~v~vST~~v~ 245 (554)
.+++ ++|+|||+|+.... .+.++..+++|+.|+..+++.+.. + .+..++|++||....
T Consensus 64 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~ 139 (252)
T PRK07856 64 ALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGR 139 (252)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccC
Confidence 5554 46999999986432 245678899999999999998864 2 123589999997553
No 207
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.20 E-value=5.7e-10 Score=110.37 Aligned_cols=125 Identities=13% Similarity=0.104 Sum_probs=87.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+++||||+|.||+.++++|++.|.+ |++.++ ...+.+.+.... ....++.++.+|++++ ++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~------~~ 72 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGAD---VILLSRNEENLKKAREKIKS----ESNVDVSYIVADLTKR------ED 72 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHHHh----hcCCceEEEEecCCCH------HH
Confidence 46889999999999999999999998864 454433 222222222111 0134688999999988 66
Q ss_pred HHHHhc------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceec
Q 042694 186 ADVIAK------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~ 245 (554)
.+.+.+ .+|++||+|+.... .+.++..+++|+.|+..+.+.+.. + .+..++|++||....
T Consensus 73 i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~ 148 (263)
T PRK08339 73 LERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIK 148 (263)
T ss_pred HHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcccc
Confidence 665554 58999999986432 256788899999887776665542 1 244689999998653
No 208
>PRK08589 short chain dehydrogenase; Validated
Probab=99.20 E-value=5.3e-10 Score=111.21 Aligned_cols=124 Identities=13% Similarity=0.117 Sum_probs=86.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|++|||||||+||+++++.|++.|. +|+++.+. ..+.+.+.... ...++.++.+|++++ ++.
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~---~vi~~~r~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~------~~~ 69 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGA---YVLAVDIAEAVSETVDKIKS-----NGGKAKAYHVDISDE------QQV 69 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCcHHHHHHHHHHHh-----cCCeEEEEEeecCCH------HHH
Confidence 4678999999999999999999999876 45555433 11222222111 234688999999987 665
Q ss_pred HHHhc-------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceec
Q 042694 187 DVIAK-------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVN 245 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~ 245 (554)
..+.+ .+|++||+|+.... .+.++..+++|+.|+..+++.+... .+-.++|++||....
T Consensus 70 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 145 (272)
T PRK08589 70 KDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQ 145 (272)
T ss_pred HHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhc
Confidence 55443 58999999986431 2356788899999998887776542 112589999987543
No 209
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.18 E-value=6.1e-10 Score=110.23 Aligned_cols=125 Identities=16% Similarity=0.187 Sum_probs=87.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++++||||+|+||++++++|++.+. +|+++++.. +++.+.... . .....++..+++|++++ +..+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~---~vv~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~Dl~~~------~~~~ 75 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGA---TIVFNDINQ-ELVDKGLAA-Y-RELGIEAHGYVCDVTDE------DGVQ 75 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCH-HHHHHHHHH-H-HhcCCceEEEEcCCCCH------HHHH
Confidence 3578999999999999999999998775 455554321 222211110 0 00134688999999987 6655
Q ss_pred HHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeecee
Q 042694 188 VIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v 244 (554)
.+.+ .+|+|||+||.... .+.++...++|+.|+..+.+.+.. + .+..++|++||...
T Consensus 76 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~ 149 (265)
T PRK07097 76 AMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMS 149 (265)
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccc
Confidence 5543 48999999997542 346778899999999988877653 1 24568999998643
No 210
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.18 E-value=2.9e-10 Score=110.47 Aligned_cols=120 Identities=16% Similarity=0.140 Sum_probs=82.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++||||||||++|+++++.|++.|. +|+++.+. ..+.+.+... ...++..+.+|+.++ +..
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~------~~~ 68 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA---QVCINSRNENKLKRMKKTLS------KYGNIHYVVGDVSST------ESA 68 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHH------hcCCeEEEECCCCCH------HHH
Confidence 578999999999999999999998876 45555432 1222212111 123678899999987 555
Q ss_pred HHHh-------cCccEEEEcCCCCCc-----hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeece
Q 042694 187 DVIA-------KEVDVIVNSAANTTF-----DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAY 243 (554)
Q Consensus 187 ~~l~-------~~vdiViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~ 243 (554)
..+. ..+|.++|+++.... .+.++..++.|+.++..+++.+..+ .+-.+++++||..
T Consensus 69 ~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 69 RNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 4443 347999999985321 2346677899999998888887653 1224789888864
No 211
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.18 E-value=5.8e-10 Score=107.80 Aligned_cols=119 Identities=16% Similarity=0.073 Sum_probs=85.0
Q ss_pred EEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc--
Q 042694 114 FVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK-- 191 (554)
Q Consensus 114 lITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~-- 191 (554)
+||||||+||+.++++|++.+. +|+++.+.. +++...... .. ...++.++.+|++++ +++..+.+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~---~v~~~~r~~-~~~~~~~~~--~~-~~~~~~~~~~Dl~~~------~~~~~~~~~~ 67 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA---RVTIASRSR-DRLAAAARA--LG-GGAPVRTAALDITDE------AAVDAFFAEA 67 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHHH--Hh-cCCceEEEEccCCCH------HHHHHHHHhc
Confidence 6999999999999999999876 455444321 122211100 00 124678899999988 77777665
Q ss_pred -CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecc
Q 042694 192 -EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 192 -~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~ 246 (554)
.+|++||+|+.... .+..+..+++|+.++..++++.. +.+..++|++||...+.
T Consensus 68 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~g~iv~~ss~~~~~ 129 (230)
T PRK07041 68 GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR-IAPGGSLTFVSGFAAVR 129 (230)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhh-hcCCeEEEEECchhhcC
Confidence 48999999986432 24677889999999999999554 35668999999886644
No 212
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.17 E-value=1e-09 Score=106.87 Aligned_cols=125 Identities=15% Similarity=0.090 Sum_probs=81.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||+|+||++++++|++.+. +|+++.+.. .+.+.+.... ....++..+.+|+++.. .+.
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~---~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~~D~~~~~----~~~ 72 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGA---TVILVARHQKKLEKVYDAIVE----AGHPEPFAIRFDLMSAE----EKE 72 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCChHHHHHHHHHHHH----cCCCCcceEEeeecccc----hHH
Confidence 4578999999999999999999999776 455554321 1222111100 01224567888987531 122
Q ss_pred HHHHh--------cCccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeece
Q 042694 186 ADVIA--------KEVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAY 243 (554)
Q Consensus 186 ~~~l~--------~~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~ 243 (554)
...+. .++|+|||+|+... + .+.+...+++|+.|+..+++.+... .+-.+++++||..
T Consensus 73 ~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~ 149 (239)
T PRK08703 73 FEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESH 149 (239)
T ss_pred HHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 32221 46899999999632 1 2456778999999999888887542 1345889988853
No 213
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.16 E-value=4.2e-10 Score=110.47 Aligned_cols=122 Identities=17% Similarity=0.131 Sum_probs=82.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+++||||+|+||.++++.|++.+. +|+++.+.. +++++.... ......++..+.+|++++ +....+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~-~~~~~~~~~--l~~~~~~~~~~~~Dl~~~------~~i~~~~ 68 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF---AVAVADLNE-ETAKETAKE--INQAGGKAVAYKLDVSDK------DQVFSAI 68 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHHH--HHhcCCeEEEEEcCCCCH------HHHHHHH
Confidence 5799999999999999999998775 455554321 111111100 000234688899999988 6555543
Q ss_pred c-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH----cCCCceEEEEeecee
Q 042694 191 K-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ----CNKLKLFVQVSTAYV 244 (554)
Q Consensus 191 ~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~----~~~~k~~v~vST~~v 244 (554)
+ .+|+|||+|+.... .+.++..+++|+.++..+++.+.. .+...+++++||...
T Consensus 69 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 140 (254)
T TIGR02415 69 DQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAG 140 (254)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhh
Confidence 2 57999999987432 245678899999999888776643 112358999998644
No 214
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.16 E-value=7.3e-10 Score=109.49 Aligned_cols=121 Identities=15% Similarity=0.184 Sum_probs=84.2
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++++++||||||+||++++++|++.|. +|+++++.. +.+.+.... ...++..+.+|++++ +..+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~-~~~~~l~~~-----~~~~~~~~~~D~~~~------~~~~~ 68 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA---RVAVLDKSA-AGLQELEAA-----HGDAVVGVEGDVRSL------DDHKE 68 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHhh-----cCCceEEEEeccCCH------HHHHH
Confidence 578999999999999999999999886 455554321 222221110 124678899999986 54444
Q ss_pred Hh-------cCccEEEEcCCCCC----c---h-----hhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeecee
Q 042694 189 IA-------KEVDVIVNSAANTT----F---D-----ERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~-------~~vdiViH~AA~v~----~---~-----~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v 244 (554)
+. .++|++||+|+... + . +.++..+++|+.|+..+++.+... ++-.++|++||...
T Consensus 69 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~ 145 (262)
T TIGR03325 69 AVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAG 145 (262)
T ss_pred HHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccce
Confidence 33 36899999998632 1 1 246788999999999999998652 12246888887644
No 215
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.16 E-value=6.3e-10 Score=110.74 Aligned_cols=124 Identities=20% Similarity=0.282 Sum_probs=84.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH------HHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF------KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~------~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
.++++++||||||+||+++++.|++.+. +|+++.+... ..+.+... .. .....++..+.+|++++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~~~~-~~-~~~~~~~~~~~~D~~~~---- 74 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGA---NIVIAAKTAEPHPKLPGTIHTAAE-EI-EAAGGQALPLVGDVRDE---- 74 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecccccccchhhHHHHHHH-HH-HhcCCceEEEEecCCCH----
Confidence 3578999999999999999999999876 4444432110 01111100 00 01234688899999998
Q ss_pred CHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeec
Q 042694 182 EEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTA 242 (554)
Q Consensus 182 s~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~ 242 (554)
+....+++ ++|+|||+|+.... .+.++..+++|+.|+..+++++... .+-.+++++||.
T Consensus 75 --~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 150 (273)
T PRK08278 75 --DQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPP 150 (273)
T ss_pred --HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence 66655543 68999999997542 2456788999999999999999742 122467788764
No 216
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.16 E-value=9.8e-10 Score=108.51 Aligned_cols=122 Identities=16% Similarity=0.163 Sum_probs=81.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++++++||||+|.||+++++.|++.+.. +++. ++. ....+...... ...++..+.+|++++ +
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~---vvi~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~------~ 70 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAK---VVINYRSDEEEANDVAEEIKK-----AGGEAIAVKGDVTVE------S 70 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCCHHHHHHHHHHHHH-----cCCeEEEEEecCCCH------H
Confidence 46899999999999999999999998753 3333 211 11222221110 134677899999987 6
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeece
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAY 243 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~ 243 (554)
....+.+ .+|++||+|+.... .+.++..+++|+.++..+++.+ .+.+.-.++|++||..
T Consensus 71 ~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~ 147 (261)
T PRK08936 71 DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVH 147 (261)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccc
Confidence 5555443 58999999996432 2456778999998886655543 4322235899999964
No 217
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.16 E-value=1.1e-09 Score=110.22 Aligned_cols=124 Identities=20% Similarity=0.239 Sum_probs=88.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||.||..+++.|.+.|. +|+++... ..+.+.+..+ ...++..+.+|++++ ++
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~l~~~~~~l~------~~~~~~~~~~Dv~d~------~~ 71 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGA---KLALVDLEEAELAALAAELG------GDDRVLTVVADVTDL------AA 71 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHhc------CCCcEEEEEecCCCH------HH
Confidence 4689999999999999999999999875 45555432 2222322221 123566778999987 65
Q ss_pred HHHHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceecc
Q 042694 186 ADVIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNG 246 (554)
Q Consensus 186 ~~~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~ 246 (554)
.+.+. ..+|+|||+|+.... .+.++..+++|+.|+..+++.+... .+..++|++||...+.
T Consensus 72 v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~ 148 (296)
T PRK05872 72 MQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFA 148 (296)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcC
Confidence 55543 368999999997542 2467788999999999999988642 1235899999976543
No 218
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.15 E-value=1.1e-09 Score=108.54 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=85.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++|+||||+|+||+++++.|++.+.+ |++++.... . . ...++..+.+|++++ +..+
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~---v~~~~~~~~-~----~-------~~~~~~~~~~D~~~~------~~~~ 65 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGAN---VVNADIHGG-D----G-------QHENYQFVPTDVSSA------EEVN 65 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCcc-c----c-------ccCceEEEEccCCCH------HHHH
Confidence 46789999999999999999999998864 444332110 0 0 123678899999987 6665
Q ss_pred HHhc-------CccEEEEcCCCCC----------------chhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEee
Q 042694 188 VIAK-------EVDVIVNSAANTT----------------FDERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVST 241 (554)
Q Consensus 188 ~l~~-------~vdiViH~AA~v~----------------~~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST 241 (554)
.+.+ .+|+|||+|+... -.+.++..+++|+.|+..+++++... .+..++|++||
T Consensus 66 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 145 (266)
T PRK06171 66 HTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSS 145 (266)
T ss_pred HHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 5543 5899999998632 12456788999999999999988642 12347999998
Q ss_pred ceec
Q 042694 242 AYVN 245 (554)
Q Consensus 242 ~~v~ 245 (554)
....
T Consensus 146 ~~~~ 149 (266)
T PRK06171 146 EAGL 149 (266)
T ss_pred cccc
Confidence 7553
No 219
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.14 E-value=4.4e-09 Score=98.97 Aligned_cols=207 Identities=16% Similarity=0.117 Sum_probs=133.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhcc-CcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFML-SKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~-~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++|.|+|||||+-+|...++.|.+.|. ++++..+. .++|.+...+ .. .++.++.-|+++. +..
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~---~vvl~aRR-~drL~~la~~-----~~~~~~~~~~~DVtD~------~~~ 68 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGA---KVVLAARR-EERLEALADE-----IGAGAALALALDVTDR------AAV 68 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCC---eEEEEecc-HHHHHHHHHh-----hccCceEEEeeccCCH------HHH
Confidence 3568999999999999999999999887 45554332 3444433322 11 4788999999998 553
Q ss_pred HHHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceeccccc
Q 042694 187 DVIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 187 ~~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~~~~~ 249 (554)
+.+. .++|++||+||...- .+.++.++++|+.|..+..++.... .+--.+|.+||..-.-
T Consensus 69 ~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~--- 145 (246)
T COG4221 69 EAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY--- 145 (246)
T ss_pred HHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc---
Confidence 3332 379999999997543 3578999999999999998887531 1334888888864311
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhh---cCCCcEEEEccceeee
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLE---RGDIPVVIIRPSVIES 326 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~---~~glp~~I~Rp~~V~g 326 (554)
+| +... .|..+|+....+.+.... ..+++++.+-||.|-.
T Consensus 146 ------~y-------------------~~~~------------vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~ 188 (246)
T COG4221 146 ------PY-------------------PGGA------------VYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVET 188 (246)
T ss_pred ------cC-------------------CCCc------------cchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecc
Confidence 11 1111 566677766666665542 3589999999999954
Q ss_pred cccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcc
Q 042694 327 TCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGM 386 (554)
Q Consensus 327 ~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~ 386 (554)
..- +.+-+. ... ..... --.....+.-+|+|+++..++..+..
T Consensus 189 ~~~---s~v~~~--g~~--------~~~~~----~y~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 189 TEF---STVRFE--GDD--------ERADK----VYKGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred eec---ccccCC--chh--------hhHHH----HhccCCCCCHHHHHHHHHHHHhCCCc
Confidence 321 121111 000 00000 00124567789999999998877654
No 220
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.14 E-value=1.9e-09 Score=104.30 Aligned_cols=169 Identities=15% Similarity=0.193 Sum_probs=115.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc--chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN--AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~--~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++||||||-||..++++|.++|+++ +++. .+..+.+.++... ...-++.+++.||+++ ++
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~l---iLvaR~~~kL~~la~~l~~----~~~v~v~vi~~DLs~~------~~ 70 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNL---ILVARREDKLEALAKELED----KTGVEVEVIPADLSDP------EA 70 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEE---EEEeCcHHHHHHHHHHHHH----hhCceEEEEECcCCCh------hH
Confidence 457899999999999999999999998754 4443 2333334333321 1234678999999999 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCch-------hhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceecccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTFD-------ERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~~~ 248 (554)
...+.+ .+|+.|++||...+. +.-++.+++|+.++.+|-++... | .+--.++.++|...+-+.
T Consensus 71 ~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~ 150 (265)
T COG0300 71 LERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT 150 (265)
T ss_pred HHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC
Confidence 666653 699999999986652 45678899999998888776643 2 133479999997664432
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
|....|...+.+.. .++|.|.++.. ..|+.|..+-||-+..
T Consensus 151 ----------------------------p~~avY~ATKa~v~--------~fSeaL~~EL~-~~gV~V~~v~PG~~~T 191 (265)
T COG0300 151 ----------------------------PYMAVYSATKAFVL--------SFSEALREELK-GTGVKVTAVCPGPTRT 191 (265)
T ss_pred ----------------------------cchHHHHHHHHHHH--------HHHHHHHHHhc-CCCeEEEEEecCcccc
Confidence 22222333333322 46777766663 4589999999988843
No 221
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.14 E-value=8.1e-10 Score=123.15 Aligned_cols=125 Identities=16% Similarity=0.188 Sum_probs=84.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++|+||||||+|+||++++++|++.|. +|++++.. ..+.+.+.... .....++..+.+|++++ ++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga---~Vvi~~r~~~~~~~~~~~l~~---~~~~~~~~~v~~Dvtd~------~~ 479 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGA---HVVLADLNLEAAEAVAAEING---QFGAGRAVALKMDVTDE------QA 479 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCCHHHHHHHHHHHHh---hcCCCcEEEEECCCCCH------HH
Confidence 5689999999999999999999998876 45555432 12222221110 00123577899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CC-CceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NK-LKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~-~k~~v~vST~~v 244 (554)
...+++ ++|+|||+|+.... .+.++...++|+.|...+.+.+.. + .+ -.++|++||...
T Consensus 480 v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a 556 (676)
T TIGR02632 480 VKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNA 556 (676)
T ss_pred HHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhh
Confidence 666554 68999999996432 235678889999998777655432 1 12 247999998644
No 222
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.14 E-value=9.1e-10 Score=108.84 Aligned_cols=121 Identities=15% Similarity=0.208 Sum_probs=85.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||+||++++++|++.|.+ |+++++. ..+.+.+.. ..++..+++|++++ +.
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~------~~ 66 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGAR---VAVLERSAEKLASLRQRF--------GDHVLVVEGDVTSY------AD 66 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHh--------CCcceEEEccCCCH------HH
Confidence 46789999999999999999999998764 5555432 222332221 24678899999987 55
Q ss_pred HHHHhc-------CccEEEEcCCCCCch--------h----hHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTFD--------E----RYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~~--------~----~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v 244 (554)
.+.+++ .+|++||+|+..... + .++..+++|+.|+..+++.+... ..-.++|++||...
T Consensus 67 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~ 146 (263)
T PRK06200 67 NQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSS 146 (263)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence 555443 689999999964311 1 25677889999999999888642 12247999998765
Q ss_pred c
Q 042694 245 N 245 (554)
Q Consensus 245 ~ 245 (554)
+
T Consensus 147 ~ 147 (263)
T PRK06200 147 F 147 (263)
T ss_pred c
Confidence 4
No 223
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.14 E-value=1.1e-09 Score=106.16 Aligned_cols=118 Identities=12% Similarity=0.097 Sum_probs=84.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++++||||+|+||+++++.|++.+. +|++++.... .. ...++..+.+|++++ -+...
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~---~v~~~~r~~~-------~~-----~~~~~~~~~~D~~~~-----~~~~~ 62 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGA---QVYGVDKQDK-------PD-----LSGNFHFLQLDLSDD-----LEPLF 62 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCC---EEEEEeCCcc-------cc-----cCCcEEEEECChHHH-----HHHHH
Confidence 4578999999999999999999998876 4444443210 00 124678899999875 13333
Q ss_pred HHhcCccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 188 VIAKEVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
.....+|+|||+|+... + .+.++..+++|+.|+.++++.+... .+..+++++||....
T Consensus 63 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 131 (235)
T PRK06550 63 DWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASF 131 (235)
T ss_pred HhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc
Confidence 33457999999998532 1 2467889999999999999988642 233589999997653
No 224
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.13 E-value=8.7e-10 Score=108.09 Aligned_cols=121 Identities=15% Similarity=0.119 Sum_probs=82.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+|+||||||+||+.++++|++.+. +|+++.+..-+.+.+.... ...+++.+.+|++++ ++...+
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~---~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~~~~ 66 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGT---HVISISRTENKELTKLAEQ-----YNSNLTFHSLDLQDV------HELETN 66 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCC---EEEEEeCCchHHHHHHHhc-----cCCceEEEEecCCCH------HHHHHH
Confidence 36899999999999999999999876 4555544322233322111 234788899999987 666665
Q ss_pred hcCc-----------cEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeecee
Q 042694 190 AKEV-----------DVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYV 244 (554)
Q Consensus 190 ~~~v-----------diViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v 244 (554)
.+++ .++||+||.... .+.+...+++|+.|+..+++.+... ....++|++||..+
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (251)
T PRK06924 67 FNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAA 144 (251)
T ss_pred HHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhh
Confidence 5422 178999987432 2457788899999977777665431 22358999999654
No 225
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.13 E-value=1.5e-09 Score=107.36 Aligned_cols=126 Identities=16% Similarity=0.169 Sum_probs=85.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++||||+|.||+++++.|++.|.. |+++.+. ..+...+.... .....++..+.+|++++ +.
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~------~~ 73 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGAS---VAICGRDEERLASAEARLRE---KFPGARLLAARCDVLDE------AD 73 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHh---hCCCceEEEEEecCCCH------HH
Confidence 46789999999999999999999998764 4444322 12222222111 00123788899999987 55
Q ss_pred HHHHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceec
Q 042694 186 ADVIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~ 245 (554)
.+.+. ..+|++||+|+.... .+.+...+++|+.+...+.+.+.. + .+..+++++||....
T Consensus 74 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 150 (265)
T PRK07062 74 VAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLAL 150 (265)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecccccc
Confidence 55443 368999999996432 235778889999988777766543 1 234689999997543
No 226
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.13 E-value=1.6e-09 Score=107.68 Aligned_cols=121 Identities=19% Similarity=0.236 Sum_probs=82.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
|+++||||||+||..+++.|++.|. +|+++++. ..+...++... .....+..+.+|++++ +..+.
T Consensus 1 k~vlItGas~giG~~la~~la~~G~---~vv~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~------~~~~~ 67 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA---ELFLTDRDADGLAQTVADARA----LGGTVPEHRALDISDY------DAVAA 67 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh----cCCCcceEEEeeCCCH------HHHHH
Confidence 4799999999999999999998775 34544432 11222111110 0122345678999987 55544
Q ss_pred Hhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c---CCCceEEEEeecee
Q 042694 189 IAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C---NKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~---~~~k~~v~vST~~v 244 (554)
+.+ .+|+|||+|+.... .+.++...++|+.|+..+++.+.. + +...+++++||...
T Consensus 68 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~ 141 (272)
T PRK07832 68 FAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAG 141 (272)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccc
Confidence 443 58999999986432 346788899999999999998753 1 12358999998743
No 227
>PRK05855 short chain dehydrogenase; Validated
Probab=99.13 E-value=9.6e-10 Score=121.32 Aligned_cols=126 Identities=17% Similarity=0.123 Sum_probs=89.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+++++||||||+||++++++|.+.|.+ |+++++. ..+.+.+.... ...++..+.+|++++ +.
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~---v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~------~~ 378 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAE---VVASDIDEAAAERTAELIRA-----AGAVAHAYRVDVSDA------DA 378 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCE---EEEEeCCHHHHHHHHHHHHh-----cCCeEEEEEcCCCCH------HH
Confidence 46789999999999999999999998764 5544432 11222211110 123678899999998 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeeceeccc
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~v~~~ 247 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|+.++.+.+... .+ -.++|++||...+..
T Consensus 379 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 458 (582)
T PRK05855 379 MEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP 458 (582)
T ss_pred HHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence 665554 48999999997542 3467888999999999998876431 11 248999999876543
No 228
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.12 E-value=2.7e-09 Score=100.76 Aligned_cols=104 Identities=15% Similarity=0.299 Sum_probs=77.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+++||||+|.||++++++|.+. . +|+.+.+.. ..+++|++++ +..+.+.
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~---~vi~~~r~~--------------------~~~~~D~~~~------~~~~~~~ 50 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H---EVITAGRSS--------------------GDVQVDITDP------ASIRALF 50 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C---cEEEEecCC--------------------CceEecCCCh------HHHHHHH
Confidence 47999999999999999999875 3 555554320 0367899987 6666655
Q ss_pred c---CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeecee
Q 042694 191 K---EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAYV 244 (554)
Q Consensus 191 ~---~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~v 244 (554)
+ ++|+|||+||...+ .+.+...+++|+.|+.++++.+.. +.+-..++++||...
T Consensus 51 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~ 115 (199)
T PRK07578 51 EKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILS 115 (199)
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEccccc
Confidence 5 79999999996432 245778889999999999998864 223357888887643
No 229
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.12 E-value=3.6e-09 Score=106.01 Aligned_cols=123 Identities=16% Similarity=0.174 Sum_probs=85.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-----------hhHHHHHHHcCCchhhhccCcEEEEEccCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-----------ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCE 176 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-----------~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~ 176 (554)
.++++++||||+|.||+.++++|++.|.+ |++.+. ...+.+.++... ...++.++.+|+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~---vii~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~~ 75 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGAR---VVVNDIGVGLDGSASGGSAAQAVVDEIVA-----AGGEAVANGDDIAD 75 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEeeCCccccccccchhHHHHHHHHHHh-----cCCceEEEeCCCCC
Confidence 56899999999999999999999998764 444321 112222221111 23467889999998
Q ss_pred CCCCCCHHHHHHHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc--CC-------C
Q 042694 177 NNLGLEEDLADVIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC--NK-------L 233 (554)
Q Consensus 177 ~~lGLs~~~~~~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~--~~-------~ 233 (554)
+ ++...+. ..+|++||+|+.... .+.++..+++|+.|+..+.+.+... .+ -
T Consensus 76 ~------~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~ 149 (286)
T PRK07791 76 W------DGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVD 149 (286)
T ss_pred H------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCC
Confidence 7 5555443 368999999997532 2467889999999999988877531 01 1
Q ss_pred ceEEEEeecee
Q 042694 234 KLFVQVSTAYV 244 (554)
Q Consensus 234 k~~v~vST~~v 244 (554)
.++|++||...
T Consensus 150 g~Iv~isS~~~ 160 (286)
T PRK07791 150 ARIINTSSGAG 160 (286)
T ss_pred cEEEEeCchhh
Confidence 47999998654
No 230
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.12 E-value=9.9e-10 Score=106.85 Aligned_cols=118 Identities=13% Similarity=0.084 Sum_probs=81.5
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
|+||||||+||.++++.|++.+.+ ++++... ..+.+.+.... ...++..+.+|++++ +....+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~---v~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~------~~~~~~ 66 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFE---ICVHYHSGRSDAESVVSAIQA-----QGGNARLLQFDVADR------VACRTL 66 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCCHHHHHHHHHHHHH-----cCCeEEEEEccCCCH------HHHHHH
Confidence 689999999999999999998764 4444321 11122211110 234788999999987 555544
Q ss_pred hc-------CccEEEEcCCCCC-------chhhHHHHHHHhchHHHHHHHHHH-Hc---CCCceEEEEeecee
Q 042694 190 AK-------EVDVIVNSAANTT-------FDERYDIAIDINTRGPCRLMEFAK-QC---NKLKLFVQVSTAYV 244 (554)
Q Consensus 190 ~~-------~vdiViH~AA~v~-------~~~~~~~~~~~Nv~gt~~ll~la~-~~---~~~k~~v~vST~~v 244 (554)
.+ .+|++||+|+... ..+.++...++|+.|+..+++.+. .+ .+..++|++||...
T Consensus 67 ~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~ 139 (239)
T TIGR01831 67 LEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSG 139 (239)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhh
Confidence 33 5799999998643 235678899999999999988652 11 23468999999644
No 231
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.12 E-value=7.6e-10 Score=112.38 Aligned_cols=126 Identities=14% Similarity=0.102 Sum_probs=86.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++||||||+||.+++++|++.|. +|++..+ ...+...++... .....++.++.+|++++ +.
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~---~Vil~~R~~~~~~~~~~~l~~---~~~~~~v~~~~~Dl~d~------~s 79 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGA---EVILPVRNRAKGEAAVAAIRT---AVPDAKLSLRALDLSSL------AS 79 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHH---hCCCCceEEEEecCCCH------HH
Confidence 4689999999999999999999999875 4554432 211222211110 00123688899999987 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~ 245 (554)
.+.+.+ .+|++||+||.... .+.++..+++|+.|...+.+++... .+-.++|++||....
T Consensus 80 v~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~ 154 (313)
T PRK05854 80 VAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAAR 154 (313)
T ss_pred HHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhc
Confidence 655543 58999999997532 1467888999999988877776531 123589999997543
No 232
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.11 E-value=1.2e-09 Score=107.80 Aligned_cols=123 Identities=14% Similarity=0.079 Sum_probs=82.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc-c--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN-A--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~-~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
.++|+|+||||+|.||++++++|++.|.+ |++.. + +..+.+.+... .....++.++++|++++ +
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~------~ 72 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVN---IAFTYNSNVEEANKIAEDLE----QKYGIKAKAYPLNILEP------E 72 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHHHHHHHHHHHH----HhcCCceEEEEcCCCCH------H
Confidence 56899999999999999999999998764 44432 1 11222222111 01234788999999987 6
Q ss_pred HHHHHhc-------CccEEEEcCCCCC---------c----hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEee
Q 042694 185 LADVIAK-------EVDVIVNSAANTT---------F----DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVST 241 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~---------~----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST 241 (554)
+.+.+.+ .+|++||+|+... + .+.+...+++|+.+...+.+.+.. + .+-.++|++||
T Consensus 73 ~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS 152 (260)
T PRK08416 73 TYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSS 152 (260)
T ss_pred HHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEec
Confidence 5555543 5899999997431 1 235667888899887776665543 1 13358999999
Q ss_pred ce
Q 042694 242 AY 243 (554)
Q Consensus 242 ~~ 243 (554)
..
T Consensus 153 ~~ 154 (260)
T PRK08416 153 TG 154 (260)
T ss_pred cc
Confidence 64
No 233
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.10 E-value=2.2e-09 Score=103.26 Aligned_cols=116 Identities=14% Similarity=0.145 Sum_probs=82.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+++++||||||+||+++++.|++.+. +|++++... +.+.+.. ...+..+.+|+++. +..+.+
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~---~v~~~~r~~-~~~~~~~--------~~~~~~~~~D~~~~------~~v~~~ 62 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGW---RVIATARDA-AALAALQ--------ALGAEALALDVADP------ASVAGL 62 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCC---EEEEEECCH-HHHHHHH--------hccceEEEecCCCH------HHHHHH
Confidence 46899999999999999999998775 455554321 1111111 12356789999998 565554
Q ss_pred h---c--CccEEEEcCCCCC---------chhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeece
Q 042694 190 A---K--EVDVIVNSAANTT---------FDERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAY 243 (554)
Q Consensus 190 ~---~--~vdiViH~AA~v~---------~~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~ 243 (554)
. . .+|+|||+|+... ..+.++...++|+.|+..+++.+... .+-.+++++||..
T Consensus 63 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~ 132 (222)
T PRK06953 63 AWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRM 132 (222)
T ss_pred HHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcc
Confidence 3 2 5899999998752 23467889999999999999988752 1224688888864
No 234
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.10 E-value=1.1e-09 Score=100.64 Aligned_cols=119 Identities=14% Similarity=0.180 Sum_probs=84.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-h-HH---H-HHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-L-FK---C-LKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~-~~---~-l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
++++||||||++|.+++++|++.+.. .|+++.+. . .+ . +++.. ....++..+.+|++++ +
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~--~v~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~~D~~~~------~ 66 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGAR--HLVLLSRSGPDAPGAAELLAELE------ALGAEVTVVACDVADR------A 66 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCC--eEEEEeCCCCCCccHHHHHHHHH------hcCCeEEEEECCCCCH------H
Confidence 47999999999999999999987643 35544321 1 00 0 11110 0234678899999876 5
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
.+..+.+ .+|.|||+|+.... .+.++...++|+.|+..+++.+++ .+.++++++||...
T Consensus 67 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~ii~~ss~~~ 139 (180)
T smart00822 67 ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD-LPLDFFVLFSSVAG 139 (180)
T ss_pred HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc-CCcceEEEEccHHH
Confidence 5555433 47999999986432 246788899999999999999977 47789999998654
No 235
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.09 E-value=1.4e-09 Score=104.95 Aligned_cols=114 Identities=13% Similarity=0.070 Sum_probs=80.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+||||||++|++++++|++.|. +|+++++.. .+.+.+ ..++..+.+|++++ ++.+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~----------~~~~~~~~~D~~d~------~~~~ 61 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGW---QVTATVRGPQQDTALQA----------LPGVHIEKLDMNDP------ASLD 61 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCC---EEEEEeCCCcchHHHHh----------ccccceEEcCCCCH------HHHH
Confidence 36899999999999999999999876 566554321 111111 13567788999987 6665
Q ss_pred HHhc-----CccEEEEcCCCCCc---------hhhHHHHHHHhchHHHHHHHHHHHcC--CCceEEEEeec
Q 042694 188 VIAK-----EVDVIVNSAANTTF---------DERYDIAIDINTRGPCRLMEFAKQCN--KLKLFVQVSTA 242 (554)
Q Consensus 188 ~l~~-----~vdiViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~la~~~~--~~k~~v~vST~ 242 (554)
.+.+ ++|+|||+|+.... .+.+...+.+|+.++..+++.+...- +...++++||.
T Consensus 62 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~ 132 (225)
T PRK08177 62 QLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ 132 (225)
T ss_pred HHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC
Confidence 5554 58999999987532 24567788899999999999886421 12467777764
No 236
>PRK06484 short chain dehydrogenase; Validated
Probab=99.07 E-value=3e-09 Score=115.93 Aligned_cols=121 Identities=14% Similarity=0.198 Sum_probs=89.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+|+++||||+|.||..++++|++.|. +|+++++. ..+.+.+.. ..++..+.+|++++ ++
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~------~~ 329 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD---RLLIIDRDAEGAKKLAEAL--------GDEHLSVQADITDE------AA 329 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHh--------CCceeEEEccCCCH------HH
Confidence 4789999999999999999999999876 45555432 222233222 23567789999988 66
Q ss_pred HHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~v~ 245 (554)
.+.+++ .+|++||+|+... + .+.++..+++|+.|+..+.+.+.. +.+-.++|++||....
T Consensus 330 ~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 405 (520)
T PRK06484 330 VESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL 405 (520)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc
Confidence 655543 5899999999752 1 235778899999999999998865 2233589999997554
No 237
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.06 E-value=3.7e-09 Score=109.84 Aligned_cols=107 Identities=20% Similarity=0.236 Sum_probs=79.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++|+|+||||||+||++++++|.+.|. +|+++++.. +++.+.... ...++..+.+|++++ ++..
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~---~Vi~l~r~~-~~l~~~~~~-----~~~~v~~v~~Dvsd~------~~v~ 240 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGA---KVVALTSNS-DKITLEING-----EDLPVKTLHWQVGQE------AALA 240 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHhh-----cCCCeEEEEeeCCCH------HHHH
Confidence 4689999999999999999999998775 445444321 122221111 112466789999987 7777
Q ss_pred HHhcCccEEEEcCCCCCc----hhhHHHHHHHhchHHHHHHHHHHH
Q 042694 188 VIAKEVDVIVNSAANTTF----DERYDIAIDINTRGPCRLMEFAKQ 229 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~ 229 (554)
...+++|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 241 ~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 241 ELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred HHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778899999999986432 246778899999999999999754
No 238
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.06 E-value=1.8e-08 Score=97.69 Aligned_cols=114 Identities=15% Similarity=0.213 Sum_probs=81.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|+||||||+||+.++++|+++++.+ .+....+... +. ....++..+++|++++ +..+.+.
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~~~-------~~----~~~~~~~~~~~Dls~~------~~~~~~~ 62 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRHHK-------PD----FQHDNVQWHALDVTDE------AEIKQLS 62 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccCCc-------cc----cccCceEEEEecCCCH------HHHHHHH
Confidence 579999999999999999999987655 4544332110 00 1134778899999988 5544443
Q ss_pred ---cCccEEEEcCCCCCc-------------hhhHHHHHHHhchHHHHHHHHHHH-cC--CCceEEEEeec
Q 042694 191 ---KEVDVIVNSAANTTF-------------DERYDIAIDINTRGPCRLMEFAKQ-CN--KLKLFVQVSTA 242 (554)
Q Consensus 191 ---~~vdiViH~AA~v~~-------------~~~~~~~~~~Nv~gt~~ll~la~~-~~--~~k~~v~vST~ 242 (554)
.++|+|||+||.... .+.+.....+|+.|+..+.+.+.. +. +..+++++||.
T Consensus 63 ~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~ 133 (235)
T PRK09009 63 EQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAK 133 (235)
T ss_pred HhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeec
Confidence 479999999997632 134667889999999988888765 21 23578888863
No 239
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.05 E-value=6.6e-09 Score=102.64 Aligned_cols=125 Identities=18% Similarity=0.253 Sum_probs=84.3
Q ss_pred hccCcEEEEeccccc-ccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 107 FLKAKNFFVTGATGF-LAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 107 ~~~~~~VlITGaTGF-lG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
..++++++||||+|+ ||+.+++.|++.|.. |++.+.. ..+...+.... .....++..+++|++++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~---V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~------ 81 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGAR---VVISDIHERRLGETADELAA---ELGLGRVEAVVCDVTSE------ 81 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHHHH---hcCCceEEEEEccCCCH------
Confidence 356799999999985 999999999998764 5554432 11122111110 00124688899999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC-CceEEEEeece
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK-LKLFVQVSTAY 243 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~-~k~~v~vST~~ 243 (554)
+..+.+.+ .+|+|||+|+.... .+.+...+++|+.|+..+++.+... .+ -..++++||..
T Consensus 82 ~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~ 159 (262)
T PRK07831 82 AQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVL 159 (262)
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchh
Confidence 66655543 68999999996421 2467788899999999988887542 11 34778877754
No 240
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.03 E-value=1.2e-08 Score=100.46 Aligned_cols=123 Identities=19% Similarity=0.134 Sum_probs=83.2
Q ss_pred ccCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEcch----------hHH---HHHHHcCCchhhhccCcEEEEEc
Q 042694 108 LKAKNFFVTGATG--FLAKVLIEKILRTVPDVGKIFIINAE----------LFK---CLKQTYGKSYQAFMLSKLVPAVG 172 (554)
Q Consensus 108 ~~~~~VlITGaTG--FlG~~Ll~~LL~~~~~V~~i~~~~~~----------~~~---~l~~~~~~~~~~~~~~kv~~v~G 172 (554)
+++|+|+|||||| .||++++++|++.|.. |++.... ..+ .+.+... ....++..+++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~---vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~ 75 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGAD---IFFTYWTAYDKEMPWGVDQDEQIQLQEELL-----KNGVKVSSMEL 75 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCe---EEEEecccccccccccccHHHHHHHHHHHH-----hcCCeEEEEEc
Confidence 5689999999995 7999999999998764 4443210 011 1111111 12347888999
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHH-Hc--CCCce
Q 042694 173 NVCENNLGLEEDLADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAK-QC--NKLKL 235 (554)
Q Consensus 173 Dl~~~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~-~~--~~~k~ 235 (554)
|++++ ++...+.+ .+|+|||+|+.... .+.++..+++|+.|...+.+.+. .+ .+-.+
T Consensus 76 D~~~~------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~ 149 (256)
T PRK12859 76 DLTQN------DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGR 149 (256)
T ss_pred CCCCH------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeE
Confidence 99987 66555543 48999999997542 23567789999999888865443 22 12358
Q ss_pred EEEEeecee
Q 042694 236 FVQVSTAYV 244 (554)
Q Consensus 236 ~v~vST~~v 244 (554)
+|++||...
T Consensus 150 iv~isS~~~ 158 (256)
T PRK12859 150 IINMTSGQF 158 (256)
T ss_pred EEEEccccc
Confidence 999999754
No 241
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.03 E-value=6.7e-09 Score=105.63 Aligned_cols=126 Identities=14% Similarity=0.242 Sum_probs=83.4
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.|+.++||||||.||++++++|++.|.+ |+++++ +..+.+.++... .....++..+.+|+++. + ++..
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~---Vil~~R~~~~l~~~~~~l~~---~~~~~~~~~~~~Dl~~~-~---~~~~ 121 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLN---LVLVARNPDKLKDVSDSIQS---KYSKTQIKTVVVDFSGD-I---DEGV 121 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHHHHHH---HCCCcEEEEEEEECCCC-c---HHHH
Confidence 3789999999999999999999998864 444432 222222222111 00123677888999842 1 2333
Q ss_pred HHHh---c--CccEEEEcCCCCC-----c----hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeecee
Q 042694 187 DVIA---K--EVDVIVNSAANTT-----F----DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYV 244 (554)
Q Consensus 187 ~~l~---~--~vdiViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v 244 (554)
+.+. . ++|++||+||... + .+.++..+++|+.|+..+.+.+.. + .+..++|++||...
T Consensus 122 ~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~ 196 (320)
T PLN02780 122 KRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAA 196 (320)
T ss_pred HHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhh
Confidence 3333 3 4669999998642 2 235678899999999999988753 1 24568999999755
No 242
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.03 E-value=4.2e-09 Score=101.47 Aligned_cols=116 Identities=15% Similarity=0.135 Sum_probs=80.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
++++||||+|.||+++++.|++.+. +|++..+.. +++.+.... .++..+.+|++++ ++++.+.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~---~v~~~~r~~-~~~~~~~~~-------~~~~~~~~D~~~~------~~v~~~~ 63 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH---KVTLVGARR-DDLEVAAKE-------LDVDAIVCDNTDP------ASLEEAR 63 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC---EEEEEeCCH-HHHHHHHHh-------ccCcEEecCCCCH------HHHHHHH
Confidence 3699999999999999999998776 445444321 222221110 1345788999987 6666555
Q ss_pred c----CccEEEEcCCCC---------Cc---hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeece
Q 042694 191 K----EVDVIVNSAANT---------TF---DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAY 243 (554)
Q Consensus 191 ~----~vdiViH~AA~v---------~~---~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~ 243 (554)
+ .+|++||+|+.. .+ .+.++..+++|+.|+..+++.+.. +.+-.++|++||..
T Consensus 64 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 133 (223)
T PRK05884 64 GLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN 133 (223)
T ss_pred HHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC
Confidence 3 689999998741 11 246788899999999999998864 22225899998853
No 243
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.02 E-value=5.4e-09 Score=106.19 Aligned_cols=123 Identities=15% Similarity=0.104 Sum_probs=85.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhC-CCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTV-PDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+++++||||||.||.+++++|++.| . +|++..+. ..+.+.+.... ...++..+.+|++++ +..
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~---~V~l~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~------~~v 68 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW---HVIMACRDFLKAEQAAKSLGM-----PKDSYTIMHLDLGSL------DSV 68 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC---EEEEEeCCHHHHHHHHHHhcC-----CCCeEEEEEcCCCCH------HHH
Confidence 5789999999999999999999887 4 45554322 12222222211 124677899999987 555
Q ss_pred HHHh-------cCccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHH-c---C-CCceEEEEeeceecc
Q 042694 187 DVIA-------KEVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQ-C---N-KLKLFVQVSTAYVNG 246 (554)
Q Consensus 187 ~~l~-------~~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~-~---~-~~k~~v~vST~~v~~ 246 (554)
+.+. ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. + + +..++|++||...+.
T Consensus 69 ~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~ 148 (314)
T TIGR01289 69 RQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNT 148 (314)
T ss_pred HHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcccc
Confidence 4443 359999999996421 246778899999998888776643 1 1 135899999987654
No 244
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.99 E-value=6.6e-09 Score=103.51 Aligned_cols=119 Identities=12% Similarity=0.118 Sum_probs=83.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+|+++|||| |+||+++++.|. .+. +|+++++.. .+.+.+.... ...++.++.+|++++ +..+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~---~Vv~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~d~------~~i~ 65 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGK---KVLLADYNEENLEAAAKTLRE-----AGFDVSTQEVDVSSR------ESVK 65 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCC---EEEEEeCCHHHHHHHHHHHHh-----cCCeEEEEEeecCCH------HHHH
Confidence 468999998 689999999996 564 566554321 1222221111 124688899999987 6555
Q ss_pred HHhc------CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeecee
Q 042694 188 VIAK------EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYV 244 (554)
Q Consensus 188 ~l~~------~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v 244 (554)
.+.+ .+|++||+||.....+.++..+++|+.|+..+++.+... ..-.+.+++||...
T Consensus 66 ~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~ 129 (275)
T PRK06940 66 ALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSG 129 (275)
T ss_pred HHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEeccc
Confidence 5543 599999999986666778899999999999999988642 12235677777644
No 245
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.99 E-value=9.7e-09 Score=100.35 Aligned_cols=105 Identities=19% Similarity=0.169 Sum_probs=77.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++++||||+|+||++++++|++.|. +|+++++...+....... .....+.+|+++. ++..
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~---~Vi~~~r~~~~~~~~~~~--------~~~~~~~~D~~~~------~~~~ 74 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGA---KVIGLTHSKINNSESNDE--------SPNEWIKWECGKE------ESLD 74 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEECCchhhhhhhcc--------CCCeEEEeeCCCH------HHHH
Confidence 5789999999999999999999999876 455444322122211110 1125678999887 6777
Q ss_pred HHhcCccEEEEcCCCCCc----hhhHHHHHHHhchHHHHHHHHHHH
Q 042694 188 VIAKEVDVIVNSAANTTF----DERYDIAIDINTRGPCRLMEFAKQ 229 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~la~~ 229 (554)
....++|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 75 ~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 75 KQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred HhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 777889999999986432 356788999999999999998764
No 246
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.99 E-value=1.9e-08 Score=99.10 Aligned_cols=122 Identities=16% Similarity=0.198 Sum_probs=85.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++|+||||||.||+.+++.|++.|. +|+++.+. ..+.+.+.... ....++..+.+|++++ +.
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~~D~~~~------~~ 71 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGC---HLHLVARDADALEALAADLRA----AHGVDVAVHALDLSSP------EA 71 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHh----hcCCceEEEEecCCCH------HH
Confidence 3578999999999999999999998775 55555432 12222221111 1134688899999987 66
Q ss_pred HHHHhc---CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeec
Q 042694 186 ADVIAK---EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTA 242 (554)
Q Consensus 186 ~~~l~~---~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~ 242 (554)
...+.+ .+|++||+|+.... .+.++..+++|+.|...+.+.+.. + .+-.+++++||.
T Consensus 72 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~ 141 (259)
T PRK06125 72 REQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGA 141 (259)
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCc
Confidence 665554 69999999986431 246788899999999998887642 2 123478888875
No 247
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=98.98 E-value=3.3e-09 Score=93.60 Aligned_cols=121 Identities=19% Similarity=0.152 Sum_probs=93.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
+++++||.||||-.|+.|++.++++ +...+||.+.+. +.+. +...+++..+..|.++- +++..
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR-------~~~d---~at~k~v~q~~vDf~Kl------~~~a~ 79 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRR-------ELPD---PATDKVVAQVEVDFSKL------SQLAT 79 (238)
T ss_pred hccceEEEeccccccHHHHHHHHhc-ccceeEEEEEec-------cCCC---ccccceeeeEEechHHH------HHHHh
Confidence 5688999999999999999999985 577888876432 1111 11334666777888776 77777
Q ss_pred HhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccc
Q 042694 189 IAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~ 247 (554)
-..++|+.|-|-|+.+-....+-++++.-.-...+.++|++ ++++.|+.+||..+...
T Consensus 80 ~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe-~Gck~fvLvSS~GAd~s 137 (238)
T KOG4039|consen 80 NEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKE-KGCKTFVLVSSAGADPS 137 (238)
T ss_pred hhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHh-CCCeEEEEEeccCCCcc
Confidence 77899999999999876666666677777777889999998 79999999999877544
No 248
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.98 E-value=1.7e-08 Score=98.05 Aligned_cols=117 Identities=9% Similarity=0.085 Sum_probs=80.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|+++||||+|.||++++++|++.|. +|+++++...+.. +... ..++.++.+|++++ ++.+.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~-~~~~-------~~~~~~~~~D~~~~------~~~~~~ 64 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ---PVIVSYRTHYPAI-DGLR-------QAGAQCIQADFSTN------AGIMAF 64 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCchhHH-HHHH-------HcCCEEEEcCCCCH------HHHHHH
Confidence 47899999999999999999999876 4454443211111 1110 11356789999987 554443
Q ss_pred h-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CC--CceEEEEeece
Q 042694 190 A-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NK--LKLFVQVSTAY 243 (554)
Q Consensus 190 ~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~--~k~~v~vST~~ 243 (554)
. ..+|++||+|+.... .+.++...++|+.++..+.+.+... .+ ..+++++||..
T Consensus 65 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~ 137 (236)
T PRK06483 65 IDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYV 137 (236)
T ss_pred HHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchh
Confidence 3 258999999986421 3567889999999998887776542 11 34789998854
No 249
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.98 E-value=1.7e-08 Score=99.56 Aligned_cols=119 Identities=14% Similarity=0.152 Sum_probs=79.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
|+|+||||+|.||+.++++|++.|. +|++.++. ..+.+.+... ...++..+.+|++++ ++.+.
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~------~~~~~~~~~~Dv~d~------~~~~~ 65 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA---RVVISSRNEENLEKALKELK------EYGEVYAVKADLSDK------DDLKN 65 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHH------hcCCceEEEcCCCCH------HHHHH
Confidence 4799999999999999999999876 45555432 1122222211 113577899999987 66655
Q ss_pred Hh-------cCccEEEEcCCCCC-----c----hhhHHHHHHHhchHHHHHHHHHHH-c---CCCceEEEEeecee
Q 042694 189 IA-------KEVDVIVNSAANTT-----F----DERYDIAIDINTRGPCRLMEFAKQ-C---NKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~-------~~vdiViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~la~~-~---~~~k~~v~vST~~v 244 (554)
+. ..+|++||+||... + .+.+.....+|+.++..+.+.+.. + .+..++|++||...
T Consensus 66 ~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~ 141 (259)
T PRK08340 66 LVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSV 141 (259)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCccc
Confidence 54 36999999999643 1 124556678898887665544321 1 23458999999755
No 250
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=98.97 E-value=3.9e-09 Score=97.89 Aligned_cols=262 Identities=17% Similarity=0.157 Sum_probs=156.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHH--HHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFK--CLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~--~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.|..||||-||-=|++|.+-||..+++|..|+ .++..|. |+...+.+.. ...........||+++. .-+.
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGii-RRsSsFNT~RIeHlY~nP~-~h~~~~mkLHYgDmTDs------s~L~ 99 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGII-RRSSSFNTARIEHLYSNPH-THNGASMKLHYGDMTDS------SCLI 99 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEE-eeccccchhhhhhhhcCch-hcccceeEEeeccccch------HHHH
Confidence 35679999999999999999999999884444 4444443 3333232211 11234667789999987 6666
Q ss_pred HHhc--CccEEEEcCCCCC----chhhHHHHHHHhchHHHHHHHHHHHcC--CCceEEEEeeceecccccceeeccccCC
Q 042694 188 VIAK--EVDVIVNSAANTT----FDERYDIAIDINTRGPCRLMEFAKQCN--KLKLFVQVSTAYVNGQRRGKVMEKPFCM 259 (554)
Q Consensus 188 ~l~~--~vdiViH~AA~v~----~~~~~~~~~~~Nv~gt~~ll~la~~~~--~~k~~v~vST~~v~~~~~~~i~E~~~~~ 259 (554)
.++. +++-|+|+||..+ |+- ++-..++...||.+||++.+.|. +--+|-..||.-.||.. .|.|-.+
T Consensus 100 k~I~~ikPtEiYnLaAQSHVkvSFdl-peYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv----~e~PQsE 174 (376)
T KOG1372|consen 100 KLISTIKPTEVYNLAAQSHVKVSFDL-PEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKV----QEIPQSE 174 (376)
T ss_pred HHHhccCchhhhhhhhhcceEEEeec-ccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccc----cCCCccc
Confidence 6766 7899999999744 433 23344677789999999998873 22478889998888853 2333333
Q ss_pred CCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCC
Q 042694 260 GDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGN 339 (554)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~ 339 (554)
..++.|. ..+ ...|.|+ +|+.-. ..+..++=.| -|+.+- .+.|..|-.--.
T Consensus 175 ~TPFyPR-------------SPY------a~aKmy~--~WivvN----yREAYnmfAc---NGILFN-HESPRRGenFVT 225 (376)
T KOG1372|consen 175 TTPFYPR-------------SPY------AAAKMYG--YWIVVN----YREAYNMFAC---NGILFN-HESPRRGENFVT 225 (376)
T ss_pred CCCCCCC-------------Chh------HHhhhhh--eEEEEE----hHHhhcceee---ccEeec-CCCCccccchhh
Confidence 3332221 111 1111111 111101 1111222111 244443 334433321111
Q ss_pred CCccceeeeecccee-eeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHh
Q 042694 340 RMMDPIILYYGKGQL-TGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHY 418 (554)
Q Consensus 340 ~~~~~i~~~~~~G~~-~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~ 418 (554)
+.....+..+..|.. ....++.+...||-+..|-++||........ +.-|-+.++ ...+.+||++.-....
T Consensus 226 RKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~------PdDfViATg--e~hsVrEF~~~aF~~i 297 (376)
T KOG1372|consen 226 RKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDS------PDDFVIATG--EQHSVREFCNLAFAEI 297 (376)
T ss_pred HHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCC------CCceEEecC--CcccHHHHHHHHHHhh
Confidence 112222222333443 2346788899999999999999888765533 356888888 6779999999988887
Q ss_pred ccC
Q 042694 419 SAS 421 (554)
Q Consensus 419 ~~~ 421 (554)
|+.
T Consensus 298 g~~ 300 (376)
T KOG1372|consen 298 GEV 300 (376)
T ss_pred CcE
Confidence 753
No 251
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.95 E-value=2.9e-08 Score=97.49 Aligned_cols=121 Identities=17% Similarity=0.171 Sum_probs=84.7
Q ss_pred ccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++|+++||||+ +-||+.++++|++.|. +|++..+. ++..+...+ ....++..+++|++++ ++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~---~Vi~~~r~--~~~~~~~~~----~~~~~~~~~~~Dl~~~------~~ 69 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGA---TVIYTYQN--DRMKKSLQK----LVDEEDLLVECDVASD------ES 69 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCC---EEEEecCc--hHHHHHHHh----hccCceeEEeCCCCCH------HH
Confidence 468999999999 6899999999999886 45544332 122221111 1123678899999987 66
Q ss_pred HHHHh-------cCccEEEEcCCCCC-------c----hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeece
Q 042694 186 ADVIA-------KEVDVIVNSAANTT-------F----DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAY 243 (554)
Q Consensus 186 ~~~l~-------~~vdiViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~ 243 (554)
.+.+. .++|++||+|+... + .+.++..+++|+.|+..+.+.+... .+-.+++++||..
T Consensus 70 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 146 (252)
T PRK06079 70 IERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG 146 (252)
T ss_pred HHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence 55543 35899999998642 1 2457888999999999998887642 2225788988754
No 252
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.94 E-value=1.5e-08 Score=108.24 Aligned_cols=122 Identities=20% Similarity=0.206 Sum_probs=86.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.++++++||||+|.||..+++.|.+.+. +|++++.+ .-+.+.+.... -+...+.+|++++ +..
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga---~vi~~~~~~~~~~l~~~~~~-------~~~~~~~~Dv~~~------~~~ 271 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA---HVVCLDVPAAGEALAAVANR-------VGGTALALDITAP------DAP 271 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCccHHHHHHHHHH-------cCCeEEEEeCCCH------HHH
Confidence 4689999999999999999999998775 55655432 12222221110 1234678899987 555
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
+.+.+ .+|+|||+|+.... .+.++..+++|+.|+.++.+.+... .+-.+||++||....
T Consensus 272 ~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~ 347 (450)
T PRK08261 272 ARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGI 347 (450)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhc
Confidence 55443 58999999997542 3567888999999999999998752 122689999987543
No 253
>PRK06484 short chain dehydrogenase; Validated
Probab=98.94 E-value=2.2e-08 Score=109.14 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=86.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|+++||||++.||..+++.|++.|. +|+++++. .+++.+.... ...++..+.+|++++ ++.+.
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~---~V~~~~r~-~~~~~~~~~~-----~~~~~~~~~~D~~~~------~~~~~ 68 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD---QVVVADRN-VERARERADS-----LGPDHHALAMDVSDE------AQIRE 68 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCC-HHHHHHHHHH-----hCCceeEEEeccCCH------HHHHH
Confidence 578999999999999999999999886 45555432 1222221111 123567899999988 66655
Q ss_pred Hhc-------CccEEEEcCCCCC-----c----hhhHHHHHHHhchHHHHHHHHHHHc---CCC-ceEEEEeeceec
Q 042694 189 IAK-------EVDVIVNSAANTT-----F----DERYDIAIDINTRGPCRLMEFAKQC---NKL-KLFVQVSTAYVN 245 (554)
Q Consensus 189 l~~-------~vdiViH~AA~v~-----~----~~~~~~~~~~Nv~gt~~ll~la~~~---~~~-k~~v~vST~~v~ 245 (554)
+.+ .+|++||+|+... + .+.++..+++|+.|+..+++.+... .+- .++|++||....
T Consensus 69 ~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~ 145 (520)
T PRK06484 69 GFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL 145 (520)
T ss_pred HHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC
Confidence 543 5999999998631 1 2467889999999999999888653 122 389999987543
No 254
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.94 E-value=1.2e-08 Score=101.03 Aligned_cols=110 Identities=15% Similarity=0.070 Sum_probs=70.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++++||||+|+||++++++|++.|.+ |+++.+ +..+.+.+.... ....++..+.+|++++.-- .+..+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~---V~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~Dv~d~~~~--~~~~~ 72 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYR---VVLHYHRSAAAASTLAAELNA----RRPNSAVTCQADLSNSATL--FSRCE 72 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCe---EEEEcCCcHHHHHHHHHHHHh----ccCCceEEEEccCCCchhh--HHHHH
Confidence 47999999999999999999998764 454422 122222221110 0123567799999987100 00112
Q ss_pred HHh-------cCccEEEEcCCCCCc--------h----------hhHHHHHHHhchHHHHHHHHHHH
Q 042694 188 VIA-------KEVDVIVNSAANTTF--------D----------ERYDIAIDINTRGPCRLMEFAKQ 229 (554)
Q Consensus 188 ~l~-------~~vdiViH~AA~v~~--------~----------~~~~~~~~~Nv~gt~~ll~la~~ 229 (554)
.+. ..+|+|||+||.... . ..+...+++|+.++..+.+.+..
T Consensus 73 ~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 139 (267)
T TIGR02685 73 AIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ 139 (267)
T ss_pred HHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 222 369999999986421 1 13667899999999999987653
No 255
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.93 E-value=6.3e-08 Score=93.74 Aligned_cols=121 Identities=17% Similarity=0.181 Sum_probs=86.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc--chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN--AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~--~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.+|+.||||||.+-||+.++.++.+++. ++.+.| .+....-.+...+ . .++..+.+|+++. ++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~---~~vl~Din~~~~~etv~~~~~-----~-g~~~~y~cdis~~------ee 100 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA---KLVLWDINKQGNEETVKEIRK-----I-GEAKAYTCDISDR------EE 100 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC---eEEEEeccccchHHHHHHHHh-----c-CceeEEEecCCCH------HH
Confidence 5789999999999999999999999875 455554 2222222222111 1 2688999999998 66
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHH----HHcCCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFA----KQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~k~~v~vST~~v 244 (554)
...+.+ ++|++|++||.+.. ++..+..+++|+.|.....+.- .+ .+-.++|-++|..-
T Consensus 101 i~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~-~~~GHIV~IaS~aG 176 (300)
T KOG1201|consen 101 IYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLE-NNNGHIVTIASVAG 176 (300)
T ss_pred HHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHh-cCCceEEEehhhhc
Confidence 666553 79999999999764 4567899999999976655443 33 24558888888643
No 256
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.92 E-value=4e-08 Score=97.81 Aligned_cols=120 Identities=18% Similarity=0.158 Sum_probs=82.6
Q ss_pred cCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 109 KAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 109 ~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
++|+++||||+ +-||+.+++.|++.|.. |++.++. ..+++.+...+ ...+ .++++|++++ +
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~---Vil~~r~~~~~~~~~~~~~~-----~~~~-~~~~~Dv~d~------~ 68 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAE---LAFTYLNEALKKRVEPIAQE-----LGSD-YVYELDVSKP------E 68 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCE---EEEEecCHHHHHHHHHHHHh-----cCCc-eEEEecCCCH------H
Confidence 57899999997 67999999999998864 4444322 11222221111 1123 5689999988 5
Q ss_pred HHHHHh-------cCccEEEEcCCCCC-------c----hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeece
Q 042694 185 LADVIA-------KEVDVIVNSAANTT-------F----DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAY 243 (554)
Q Consensus 185 ~~~~l~-------~~vdiViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~ 243 (554)
..+.+. ..+|++||+|+... + .+.++..+++|+.|+..+.+.+.. +.+-.++|++||..
T Consensus 69 ~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 69 HFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 555544 36899999999642 1 245788999999999999888764 22225899999864
No 257
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.91 E-value=3.2e-08 Score=96.53 Aligned_cols=126 Identities=20% Similarity=0.200 Sum_probs=89.5
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
...+|.|+||||+.-||.+++.+|.+.|-.+ +.+. ..+..+++.++..+.. ..+++.++++|+++. ++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l--~lvar~~rrl~~v~~~l~~~~---~~~~v~~~~~Dvs~~------~~ 77 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKL--VLVARRARRLERVAEELRKLG---SLEKVLVLQLDVSDE------ES 77 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCce--EEeehhhhhHHHHHHHHHHhC---CcCccEEEeCccCCH------HH
Confidence 3578999999999999999999999987643 2222 2233445533322211 112799999999998 55
Q ss_pred HHHH-------hcCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc-C--CCceEEEEeece
Q 042694 186 ADVI-------AKEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC-N--KLKLFVQVSTAY 243 (554)
Q Consensus 186 ~~~l-------~~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~-~--~~k~~v~vST~~ 243 (554)
.... ..++|+.||+||.... .+..+...++|+.|+-.+.+++..+ . +--++|.+||..
T Consensus 78 ~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSia 152 (282)
T KOG1205|consen 78 VKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIA 152 (282)
T ss_pred HHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccc
Confidence 5533 3489999999998652 2466788999999999999888642 1 225899999863
No 258
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.91 E-value=4.1e-08 Score=97.53 Aligned_cols=122 Identities=11% Similarity=0.093 Sum_probs=83.2
Q ss_pred ccCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATG--FLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTG--FlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.++|+++||||++ -||+.++++|++.|.+ |++..+. ..+++.+.... ......+++|++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~---V~~~~r~~~~~~~~~~~~~~------~g~~~~~~~Dv~d~------ 69 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAE---LAFTYQGEALGKRVKPLAES------LGSDFVLPCDVEDI------ 69 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCE---EEEecCchHHHHHHHHHHHh------cCCceEEeCCCCCH------
Confidence 4678999999996 8999999999998864 4444321 11222221110 11234689999987
Q ss_pred HHHHHHh-------cCccEEEEcCCCCC-------c----hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeecee
Q 042694 184 DLADVIA-------KEVDVIVNSAANTT-------F----DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAYV 244 (554)
Q Consensus 184 ~~~~~l~-------~~vdiViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~v 244 (554)
++.+.+. ..+|++||+|+... + .+.++..+++|+.|+..+.+.+.. +.+-.++|++||...
T Consensus 70 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~ 149 (271)
T PRK06505 70 ASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGS 149 (271)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCc
Confidence 6655554 36899999999642 1 246778889999999999887753 222247999988643
No 259
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.87 E-value=6.6e-08 Score=96.12 Aligned_cols=121 Identities=12% Similarity=0.150 Sum_probs=84.3
Q ss_pred hccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCC
Q 042694 107 FLKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLE 182 (554)
Q Consensus 107 ~~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs 182 (554)
..++|+++||||+ +=||..++++|++.|. +|++..+. ..+++.+.... ......+++|++++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~---~V~l~~r~~~~~~~~~~l~~~------~~~~~~~~~Dl~~~----- 72 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA---ELAFTYQGDALKKRVEPLAAE------LGAFVAGHCDVTDE----- 72 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCchHHHHHHHHHHHh------cCCceEEecCCCCH-----
Confidence 3567999999997 7899999999999886 44544321 12222222111 12345789999987
Q ss_pred HHHHHHHhc-------CccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeec
Q 042694 183 EDLADVIAK-------EVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTA 242 (554)
Q Consensus 183 ~~~~~~l~~-------~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~ 242 (554)
++.+.+.+ .+|++||+|+.... .+.++..+++|+.|+..+++.+.. +.+-.++|++||.
T Consensus 73 -~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~ 150 (272)
T PRK08159 73 -ASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYY 150 (272)
T ss_pred -HHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecc
Confidence 66665543 58999999986531 246788999999999999998765 2233588888875
No 260
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.87 E-value=5.4e-08 Score=95.79 Aligned_cols=121 Identities=13% Similarity=0.131 Sum_probs=79.8
Q ss_pred EEEEecccccccHHHHHHHHh----hCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILR----TVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~----~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.|+||||||.||.+++++|++ .+. +|+++.+. ..+.+.++... .....++..+.+|++++ ++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~---~V~~~~r~~~~~~~~~~~l~~---~~~~~~v~~~~~Dl~~~------~~ 69 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS---VLVLSARNDEALRQLKAEIGA---ERSGLRVVRVSLDLGAE------AG 69 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc---EEEEEEcCHHHHHHHHHHHHh---cCCCceEEEEEeccCCH------HH
Confidence 589999999999999999986 343 45555432 22222222110 00123678899999987 66
Q ss_pred HHHHhcC-----------ccEEEEcCCCCC-----c-----hhhHHHHHHHhchHHHHHHHHHHHc-C---C-CceEEEE
Q 042694 186 ADVIAKE-----------VDVIVNSAANTT-----F-----DERYDIAIDINTRGPCRLMEFAKQC-N---K-LKLFVQV 239 (554)
Q Consensus 186 ~~~l~~~-----------vdiViH~AA~v~-----~-----~~~~~~~~~~Nv~gt~~ll~la~~~-~---~-~k~~v~v 239 (554)
.+.+.+. .|++||+||... + .+.++..+++|+.|+..+.+.+... . + ..+++++
T Consensus 70 v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~i 149 (256)
T TIGR01500 70 LEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNI 149 (256)
T ss_pred HHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEE
Confidence 5554431 269999998632 1 2456789999999998888776542 1 1 2479999
Q ss_pred eecee
Q 042694 240 STAYV 244 (554)
Q Consensus 240 ST~~v 244 (554)
||...
T Consensus 150 sS~~~ 154 (256)
T TIGR01500 150 SSLCA 154 (256)
T ss_pred CCHHh
Confidence 99754
No 261
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.87 E-value=7.1e-08 Score=95.31 Aligned_cols=122 Identities=16% Similarity=0.163 Sum_probs=81.6
Q ss_pred ccCcEEEEecc--cccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGA--TGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGa--TGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.++|+++|||| ++-||+.++++|++.|.+ |++... ...+.+++.... ......+++|++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~---v~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~------ 68 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAE---LAFTYVVDKLEERVRKMAAE------LDSELVFRCDVASD------ 68 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEcCcHHHHHHHHHHHhc------cCCceEEECCCCCH------
Confidence 56889999997 668999999999998864 443321 112222222111 12345789999988
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc--------h----hhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeec
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF--------D----ERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTA 242 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~--------~----~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~ 242 (554)
++.+.+.+ .+|++||+||.... . +.++..+++|+.++..+.+.+..+ .+-.++|++||.
T Consensus 69 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~ 148 (261)
T PRK08690 69 DEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYL 148 (261)
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccc
Confidence 66665542 69999999997531 1 245677889999998888776532 122478888876
Q ss_pred ee
Q 042694 243 YV 244 (554)
Q Consensus 243 ~v 244 (554)
..
T Consensus 149 ~~ 150 (261)
T PRK08690 149 GA 150 (261)
T ss_pred cc
Confidence 44
No 262
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.87 E-value=8.4e-08 Score=94.58 Aligned_cols=121 Identities=14% Similarity=0.085 Sum_probs=82.9
Q ss_pred ccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.++|+++||||+ +-||+.++++|++.|.+ |++.+.. ..+.+.+... ....+.++++|++++
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~---v~l~~r~~~~~~~~~~~~~------~~~~~~~~~~D~~~~------ 72 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAE---LAVTYLNDKARPYVEPLAE------ELDAPIFLPLDVREP------ 72 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCE---EEEEeCChhhHHHHHHHHH------hhccceEEecCcCCH------
Confidence 468999999998 48999999999998764 4444322 1111222111 112345789999988
Q ss_pred HHHHHHh-------cCccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeece
Q 042694 184 DLADVIA-------KEVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAY 243 (554)
Q Consensus 184 ~~~~~l~-------~~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~ 243 (554)
++.+.+. ..+|++||+|+.... .+.++..+++|+.|+..+.+.+.. +.+-.+++++||..
T Consensus 73 ~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 73 GQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 6665554 268999999986421 246788999999999999998754 22224788888753
No 263
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.86 E-value=3.3e-08 Score=90.36 Aligned_cols=121 Identities=16% Similarity=0.164 Sum_probs=92.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch----hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE----LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~----~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
|+|+||||+|=||+.+++.|++++. .+|++..+. ..+.+....+. ...++.++++|++++ ++.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~~~~~~~~~l~~~l~~-----~~~~~~~~~~D~~~~------~~~ 67 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA--RVVILTSRSEDSEGAQELIQELKA-----PGAKITFIECDLSDP------ESI 67 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESSCHHHHHHHHHHHHHH-----TTSEEEEEESETTSH------HHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeecccccccccccccccc-----ccccccccccccccc------ccc
Confidence 6899999999999999999999743 255555432 23333332221 237899999999987 666
Q ss_pred HHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceec
Q 042694 187 DVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVN 245 (554)
Q Consensus 187 ~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~ 245 (554)
+.+.+ .+|++||+|+.... .+.++..+++|+.+...+.+++.. .+-..+|++||....
T Consensus 68 ~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~~~ 139 (167)
T PF00106_consen 68 RALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIAGV 139 (167)
T ss_dssp HHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGGGT
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchhhc
Confidence 66553 79999999998762 356789999999999999999987 577899999997553
No 264
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.86 E-value=9.3e-08 Score=94.26 Aligned_cols=121 Identities=17% Similarity=0.158 Sum_probs=83.0
Q ss_pred ccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEE--cc---hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCC
Q 042694 108 LKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFII--NA---ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLG 180 (554)
Q Consensus 108 ~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~--~~---~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lG 180 (554)
.++|+++||||+ +=||+.++++|++.|.+| ++. +. ...+.+.+... ...++.++++|++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v---~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~--- 71 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAEL---GITYLPDEKGRFEKKVRELTE------PLNPSLFLPCDVQDD--- 71 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEE---EEEecCcccchHHHHHHHHHh------ccCcceEeecCcCCH---
Confidence 357899999986 689999999999988754 332 11 11122222111 113466889999988
Q ss_pred CCHHHHHHHhc-------CccEEEEcCCCCC-------c----hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEee
Q 042694 181 LEEDLADVIAK-------EVDVIVNSAANTT-------F----DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVST 241 (554)
Q Consensus 181 Ls~~~~~~l~~-------~vdiViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST 241 (554)
+..+.+.+ .+|++||+|+... + .+.++..+++|+.|+..+.+.+.. +.+-.++|++||
T Consensus 72 ---~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS 148 (258)
T PRK07370 72 ---AQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTY 148 (258)
T ss_pred ---HHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 66655442 6899999999642 2 245778899999999999888753 222258999998
Q ss_pred ce
Q 042694 242 AY 243 (554)
Q Consensus 242 ~~ 243 (554)
..
T Consensus 149 ~~ 150 (258)
T PRK07370 149 LG 150 (258)
T ss_pred cc
Confidence 64
No 265
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.83 E-value=1.3e-07 Score=93.29 Aligned_cols=124 Identities=13% Similarity=0.093 Sum_probs=83.7
Q ss_pred ccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
+++|+++||||+ +=||+.++++|++.|.+ |++..+ ...+++.+.... ....++..+.+|++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~---v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~d~------ 71 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAK---LVFTYAGERLEKEVRELADT----LEGQESLLLPCDVTSD------ 71 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCE---EEEecCcccchHHHHHHHHH----cCCCceEEEecCCCCH------
Confidence 467899999997 78999999999998864 454432 111222221111 0124678899999988
Q ss_pred HHHHHHh-------cCccEEEEcCCCCC-------c----hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeecee
Q 042694 184 DLADVIA-------KEVDVIVNSAANTT-------F----DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAYV 244 (554)
Q Consensus 184 ~~~~~l~-------~~vdiViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~v 244 (554)
+..+.+. ..+|++||+|+... + .+.+...+++|+.++..+.+.+.. +.+-.++|++||...
T Consensus 72 ~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 151 (257)
T PRK08594 72 EEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG 151 (257)
T ss_pred HHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence 6555544 35899999998642 1 134567788999999888877764 222247999998643
No 266
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.81 E-value=2.1e-07 Score=92.02 Aligned_cols=121 Identities=18% Similarity=0.165 Sum_probs=82.2
Q ss_pred ccCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATG--FLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTG--FlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.++|+++||||++ =||+.+++.|++.|.. |++.++. ..+.+.+... ...++.++.+|++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~---vil~~r~~~~~~~~~~~~~------~~~~~~~~~~Dl~~~------ 68 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAE---LAFTYQNDKLKGRVEEFAA------QLGSDIVLPCDVAED------ 68 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCE---EEEEecchhHHHHHHHHHh------ccCCceEeecCCCCH------
Confidence 4689999999985 7999999999998864 4443321 1111211111 113456789999987
Q ss_pred HHHHHHhc-------CccEEEEcCCCCCc------------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeece
Q 042694 184 DLADVIAK-------EVDVIVNSAANTTF------------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAY 243 (554)
Q Consensus 184 ~~~~~l~~-------~vdiViH~AA~v~~------------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~ 243 (554)
++.+.+.+ .+|++||+||.... .+.++..+++|+.|...+.+.+..+ .+-.+++++||..
T Consensus 69 ~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~ 148 (262)
T PRK07984 69 ASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLG 148 (262)
T ss_pred HHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCC
Confidence 66665543 58999999986421 2356678899999998888877543 1124788888764
No 267
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.80 E-value=1.8e-07 Score=92.27 Aligned_cols=122 Identities=16% Similarity=0.150 Sum_probs=82.9
Q ss_pred ccCcEEEEecc--cccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGA--TGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGa--TGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.++|+|+|||| ++=||..++++|++.|.+ |++... ...+++.+.... . ....++.+|++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~---v~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~Dv~d~------ 68 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAE---LAFTYVGDRFKDRITEFAAE-----F-GSDLVFPCDVASD------ 68 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCe---EEEEccchHHHHHHHHHHHh-----c-CCcceeeccCCCH------
Confidence 46789999996 568999999999998864 444321 112222221111 1 1234688999988
Q ss_pred HHHHHHh-------cCccEEEEcCCCCC-------c-----hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeece
Q 042694 184 DLADVIA-------KEVDVIVNSAANTT-------F-----DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAY 243 (554)
Q Consensus 184 ~~~~~l~-------~~vdiViH~AA~v~-------~-----~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~ 243 (554)
++.+.+. ..+|++||+|+... + .+.++..+++|+.|+..+.+.+.. +.+-.++|++||..
T Consensus 69 ~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~ 148 (260)
T PRK06997 69 EQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG 148 (260)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 6666554 36999999998742 1 235677899999999999888764 22235799998864
Q ss_pred e
Q 042694 244 V 244 (554)
Q Consensus 244 v 244 (554)
.
T Consensus 149 ~ 149 (260)
T PRK06997 149 A 149 (260)
T ss_pred c
Confidence 3
No 268
>PLN00015 protochlorophyllide reductase
Probab=98.78 E-value=1.2e-07 Score=96.01 Aligned_cols=118 Identities=15% Similarity=0.124 Sum_probs=81.1
Q ss_pred EEecccccccHHHHHHHHhhC-CCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 114 FVTGATGFLAKVLIEKILRTV-PDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 114 lITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
+||||||.||..++++|++.+ . +|++..+. ..+.+.+.... ...++..+.+|++++ +..+.+.
T Consensus 1 lITGas~GIG~aia~~l~~~G~~---~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~d~------~~v~~~~ 66 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKW---HVVMACRDFLKAERAAKSAGM-----PKDSYTVMHLDLASL------DSVRQFV 66 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCC---EEEEEeCCHHHHHHHHHHhcC-----CCCeEEEEEecCCCH------HHHHHHH
Confidence 599999999999999999987 4 45554332 12222222211 124678889999987 6555444
Q ss_pred c-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHH-c--CC--CceEEEEeeceec
Q 042694 191 K-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQ-C--NK--LKLFVQVSTAYVN 245 (554)
Q Consensus 191 ~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~--~k~~v~vST~~v~ 245 (554)
+ .+|++||+||... + .+.++..+++|+.|+..+.+.+.. + .+ ..++|++||...+
T Consensus 67 ~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 67 DNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred HHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 2 5899999999742 1 246788999999998888766543 2 12 3589999997653
No 269
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.78 E-value=1.9e-07 Score=90.14 Aligned_cols=121 Identities=14% Similarity=0.162 Sum_probs=80.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++||||++=||+.++++|.+.|. +|++..+. ..+.+.+.... ...++..+..|++++ +.
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~---~V~~~~r~~~~l~~~~~~i~~-----~~~~~~~~~~D~~~~------~~ 68 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGA---TLILCDQDQSALKDTYEQCSA-----LTDNVYSFQLKDFSQ------ES 68 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCC---EEEEEcCCHHHHHHHHHHHHh-----cCCCeEEEEccCCCH------HH
Confidence 3578999999999999999999999876 45555432 12222221111 124567788999887 55
Q ss_pred HHHHh-------c-CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHH-c---CCCceEEEEeec
Q 042694 186 ADVIA-------K-EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQ-C---NKLKLFVQVSTA 242 (554)
Q Consensus 186 ~~~l~-------~-~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~-~---~~~k~~v~vST~ 242 (554)
.+.+. . .+|++||+|+... + .+.+.....+|+.++..+++.+.. + ++-..+|++||.
T Consensus 69 ~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~ 145 (227)
T PRK08862 69 IRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISH 145 (227)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecC
Confidence 55443 3 6999999997432 1 134566778899888777665542 2 113488999984
No 270
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.77 E-value=2.7e-07 Score=90.86 Aligned_cols=117 Identities=15% Similarity=0.105 Sum_probs=81.6
Q ss_pred ccCcEEEEecc--cccccHHHHHHHHhhCCCccEEEEEcch----hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC
Q 042694 108 LKAKNFFVTGA--TGFLAKVLIEKILRTVPDVGKIFIINAE----LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 108 ~~~~~VlITGa--TGFlG~~Ll~~LL~~~~~V~~i~~~~~~----~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL 181 (554)
.++|+++|||| ++-||..++++|++.|. +|++.+.. ..+.+.+.. ..++.++.+|++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~---~v~l~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~---- 69 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGA---EVVLTGFGRALRLTERIAKRL--------PEPAPVLELDVTNE---- 69 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCC---EEEEecCccchhHHHHHHHhc--------CCCCcEEeCCCCCH----
Confidence 46789999999 78999999999999875 55655421 122222221 23567899999987
Q ss_pred CHHHHHHHh-------cCccEEEEcCCCCC-------c----hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEee
Q 042694 182 EEDLADVIA-------KEVDVIVNSAANTT-------F----DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVST 241 (554)
Q Consensus 182 s~~~~~~l~-------~~vdiViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST 241 (554)
+..+.+. ..+|++||+|+... + .+.++..+++|+.|+..+.+.+.. +.+-.+++++|+
T Consensus 70 --~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~ 146 (256)
T PRK07889 70 --EHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDF 146 (256)
T ss_pred --HHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEee
Confidence 6555543 36999999998752 2 134567789999999988888764 222246777764
No 271
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.76 E-value=3e-07 Score=90.80 Aligned_cols=122 Identities=11% Similarity=0.092 Sum_probs=81.9
Q ss_pred ccCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEcch-h-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATG--FLAKVLIEKILRTVPDVGKIFIINAE-L-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTG--FlG~~Ll~~LL~~~~~V~~i~~~~~~-~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
.++|+++||||++ =||+.+++.|.+.|.+ |++.++. . -+.+++.... . .....+++|++++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~---v~~~~r~~~~~~~~~~l~~~-----~-g~~~~~~~Dv~~~------ 70 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAE---LWFTYQSEVLEKRVKPLAEE-----I-GCNFVSELDVTNP------ 70 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCE---EEEEeCchHHHHHHHHHHHh-----c-CCceEEEccCCCH------
Confidence 4678999999996 6999999999988764 4443322 1 1122221110 1 1224578999998
Q ss_pred HHHHHHh-------cCccEEEEcCCCCC-------c----hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeecee
Q 042694 184 DLADVIA-------KEVDVIVNSAANTT-------F----DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAYV 244 (554)
Q Consensus 184 ~~~~~l~-------~~vdiViH~AA~v~-------~----~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~v 244 (554)
++.+.+. ..+|++||+|+... + .+.++..+++|+.|+..+++.+.. +.+-.++|++||...
T Consensus 71 ~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~ 150 (260)
T PRK06603 71 KSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGA 150 (260)
T ss_pred HHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcc
Confidence 6655554 35999999998642 1 246778899999999999887753 222248999998543
No 272
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.76 E-value=2.8e-07 Score=93.12 Aligned_cols=122 Identities=11% Similarity=0.083 Sum_probs=82.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch------------hHHHHHHHcCCchhhhccCcEEEEEccCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE------------LFKCLKQTYGKSYQAFMLSKLVPAVGNVC 175 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~------------~~~~l~~~~~~~~~~~~~~kv~~v~GDl~ 175 (554)
.++|+++||||++-||..++++|++.|. +|++..+. ..+.+.+.... ...++.++.+|++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~Dv~ 77 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGA---TVYVTGRSTRARRSEYDRPETIEETAELVTA-----AGGRGIAVQVDHL 77 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecccccccccccccchHHHHHHHHHh-----cCCceEEEEcCCC
Confidence 4689999999999999999999999876 44444321 11112111110 1246778999999
Q ss_pred CCCCCCCHHHHHHHhc-------CccEEEEcC-CCC-------Cc----hhhHHHHHHHhchHHHHHHHHHHH-c--CCC
Q 042694 176 ENNLGLEEDLADVIAK-------EVDVIVNSA-ANT-------TF----DERYDIAIDINTRGPCRLMEFAKQ-C--NKL 233 (554)
Q Consensus 176 ~~~lGLs~~~~~~l~~-------~vdiViH~A-A~v-------~~----~~~~~~~~~~Nv~gt~~ll~la~~-~--~~~ 233 (554)
++ ++.+.+.+ .+|++||+| +.. .+ .+.+...+++|+.|+..+.+.+.. + .+-
T Consensus 78 ~~------~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~ 151 (305)
T PRK08303 78 VP------EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPG 151 (305)
T ss_pred CH------HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCC
Confidence 87 66665543 689999999 632 11 134667788999999888877754 2 112
Q ss_pred ceEEEEeece
Q 042694 234 KLFVQVSTAY 243 (554)
Q Consensus 234 k~~v~vST~~ 243 (554)
.++|++||..
T Consensus 152 g~IV~isS~~ 161 (305)
T PRK08303 152 GLVVEITDGT 161 (305)
T ss_pred cEEEEECCcc
Confidence 4799998853
No 273
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.71 E-value=3.6e-07 Score=93.27 Aligned_cols=167 Identities=19% Similarity=0.184 Sum_probs=98.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.+..+|||+||||-+|+.+++.|++++..| .++.++.. ..+..... .........+..|...+ .+...
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~v---ra~VRd~~-~a~~~~~~---~~~d~~~~~v~~~~~~~-----~d~~~ 144 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSV---RALVRDEQ-KAEDLLGV---FFVDLGLQNVEADVVTA-----IDILK 144 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCee---eeeccChh-hhhhhhcc---cccccccceeeeccccc-----cchhh
Confidence 456789999999999999999999998654 33322111 11111000 00112334455555443 13344
Q ss_pred HHhcC----ccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCc
Q 042694 188 VIAKE----VDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSI 263 (554)
Q Consensus 188 ~l~~~----vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~ 263 (554)
.+.+. +.+++-|++...-.++-..-.++...|+++++++|+.. ++++++++|+....-... +
T Consensus 145 ~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~~~~~~------~------- 210 (411)
T KOG1203|consen 145 KLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGGTKFNQ------P------- 210 (411)
T ss_pred hhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecCcccCC------C-------
Confidence 44443 34666666554332211122346678999999999984 999999998875533211 0
Q ss_pred ccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceee
Q 042694 264 AKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIE 325 (554)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~ 325 (554)
++. . . ...-...+|.++|...+..|+|.+|+||+...
T Consensus 211 ------------~~~---~---~-------~~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~ 247 (411)
T KOG1203|consen 211 ------------PNI---L---L-------LNGLVLKAKLKAEKFLQDSGLPYTIIRPGGLE 247 (411)
T ss_pred ------------chh---h---h-------hhhhhhHHHHhHHHHHHhcCCCcEEEeccccc
Confidence 000 0 0 01112355677787777889999999998763
No 274
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.63 E-value=2.5e-07 Score=86.02 Aligned_cols=119 Identities=13% Similarity=0.217 Sum_probs=82.7
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcch-----hH-HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-----LF-KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-----~~-~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++||||+|-||..+++.|.+++ ..+++++.+. .. +.+++... ...+|.++.+|++++ ++
T Consensus 2 tylitGG~gglg~~la~~La~~~--~~~~il~~r~~~~~~~~~~~i~~l~~------~g~~v~~~~~Dv~d~------~~ 67 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG--ARRLILLGRSGAPSAEAEAAIRELES------AGARVEYVQCDVTDP------EA 67 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHHHHH------TT-EEEEEE--TTSH------HH
T ss_pred EEEEECCccHHHHHHHHHHHHcC--CCEEEEeccCCCccHHHHHHHHHHHh------CCCceeeeccCccCH------HH
Confidence 68999999999999999999976 3478877543 11 12221111 245899999999998 77
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceec
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~ 245 (554)
.+.+.+ .++.|||+|+.... .+.++.....-+.|+.+|.++... ..++.|+..||....
T Consensus 68 v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~-~~l~~~i~~SSis~~ 140 (181)
T PF08659_consen 68 VAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN-RPLDFFILFSSISSL 140 (181)
T ss_dssp HHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT-TTTSEEEEEEEHHHH
T ss_pred HHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc-CCCCeEEEECChhHh
Confidence 777764 57899999987542 245778888899999999999987 589999999998663
No 275
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=98.62 E-value=9e-08 Score=88.32 Aligned_cols=208 Identities=15% Similarity=0.053 Sum_probs=125.9
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK 191 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~ 191 (554)
.+++.|+.||.|+++++.-+..+..| ..+.++. ...+. +.....+....||.-.. .-+.....
T Consensus 54 ~tlvlggnpfsgs~vlk~A~~vv~sv--gilsen~-~k~~l--------~sw~~~vswh~gnsfss------n~~k~~l~ 116 (283)
T KOG4288|consen 54 WTLVLGGNPFSGSEVLKNATNVVHSV--GILSENE-NKQTL--------SSWPTYVSWHRGNSFSS------NPNKLKLS 116 (283)
T ss_pred HHhhhcCCCcchHHHHHHHHhhceee--eEeeccc-Ccchh--------hCCCcccchhhcccccc------Ccchhhhc
Confidence 47889999999999999999877655 2222221 11111 12455677777876544 33444456
Q ss_pred CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCCCCCccccccccc
Q 042694 192 EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSN 271 (554)
Q Consensus 192 ~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~ 271 (554)
.+..++-+++-. .+-..+.++|=....+-.++|++ .++++|+|+|...-.-.
T Consensus 117 g~t~v~e~~ggf---gn~~~m~~ing~ani~a~kaa~~-~gv~~fvyISa~d~~~~------------------------ 168 (283)
T KOG4288|consen 117 GPTFVYEMMGGF---GNIILMDRINGTANINAVKAAAK-AGVPRFVYISAHDFGLP------------------------ 168 (283)
T ss_pred CCcccHHHhcCc---cchHHHHHhccHhhHHHHHHHHH-cCCceEEEEEhhhcCCC------------------------
Confidence 777888776642 33456778888888888999998 59999999997532111
Q ss_pred ccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeecc
Q 042694 272 SRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGK 351 (554)
Q Consensus 272 ~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~ 351 (554)
++.. . +|...|..||.-.+ ...++.-+|+|||.+||. .++.|.--.+...+..+.+.-+
T Consensus 169 ------~~i~----r------GY~~gKR~AE~Ell---~~~~~rgiilRPGFiyg~--R~v~g~~~pL~~vg~pl~~~~~ 227 (283)
T KOG4288|consen 169 ------PLIP----R------GYIEGKREAEAELL---KKFRFRGIILRPGFIYGT--RNVGGIKSPLHTVGEPLEMVLK 227 (283)
T ss_pred ------Cccc----h------hhhccchHHHHHHH---HhcCCCceeeccceeecc--cccCcccccHHhhhhhHHHHHH
Confidence 1110 1 45555555554322 234688899999999997 3333322111111111111112
Q ss_pred ce---eeeeecCCCcccccchhhHHHHHHHHHHHHhc
Q 042694 352 GQ---LTGFLVDPNGILDVVPADMVVNATLAAIAQHG 385 (554)
Q Consensus 352 G~---~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~ 385 (554)
+. +..++.-.......|+|++||.+.+.++.++.
T Consensus 228 ~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~ 264 (283)
T KOG4288|consen 228 FALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPD 264 (283)
T ss_pred hhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCC
Confidence 22 22233445667889999999999999887643
No 276
>PRK05599 hypothetical protein; Provisional
Probab=98.59 E-value=1.9e-06 Score=84.21 Aligned_cols=120 Identities=8% Similarity=-0.005 Sum_probs=76.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
|+++||||++-||+.++++|.+ +. +|++..+. ..+.+.+.... ....++..+.+|++++ +..+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~---~Vil~~r~~~~~~~~~~~l~~----~~~~~~~~~~~Dv~d~------~~v~~ 66 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE---DVVLAARRPEAAQGLASDLRQ----RGATSVHVLSFDAQDL------DTHRE 66 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC---EEEEEeCCHHHHHHHHHHHHh----ccCCceEEEEcccCCH------HHHHH
Confidence 5799999999999999999984 64 55655432 12222222111 0123578899999987 55444
Q ss_pred Hh-------cCccEEEEcCCCCCch-------hhHHHHHHHhchHHHHHHHHHHH-c---CCCceEEEEeecee
Q 042694 189 IA-------KEVDVIVNSAANTTFD-------ERYDIAIDINTRGPCRLMEFAKQ-C---NKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~-------~~vdiViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~la~~-~---~~~k~~v~vST~~v 244 (554)
+. ..+|++||+|+..... +...+...+|+.+...+++.+.. + ++-.++|++||...
T Consensus 67 ~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~ 140 (246)
T PRK05599 67 LVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAG 140 (246)
T ss_pred HHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 33 3699999999975321 12345567888888766655421 2 11358999998754
No 277
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.53 E-value=9.4e-07 Score=88.70 Aligned_cols=124 Identities=18% Similarity=0.114 Sum_probs=88.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+++++|||||.-||...+++|.+.|. +||+..+. .-+..++.... +....++.+++.|+++. +.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga---~Vv~~~R~~~~~~~~~~~i~~---~~~~~~i~~~~lDLssl------~S 100 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGA---HVVLACRNEERGEEAKEQIQK---GKANQKIRVIQLDLSSL------KS 100 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCC---EEEEEeCCHHHHHHHHHHHHh---cCCCCceEEEECCCCCH------HH
Confidence 4578999999999999999999999874 56654322 11222222111 22457889999999988 55
Q ss_pred HHHHhc-------CccEEEEcCCCCCc-----hhhHHHHHHHhchHHHHHHHHHH----HcCCCceEEEEeecee
Q 042694 186 ADVIAK-------EVDVIVNSAANTTF-----DERYDIAIDINTRGPCRLMEFAK----QCNKLKLFVQVSTAYV 244 (554)
Q Consensus 186 ~~~l~~-------~vdiViH~AA~v~~-----~~~~~~~~~~Nv~gt~~ll~la~----~~~~~k~~v~vST~~v 244 (554)
...+++ ..|+.|++||.... .+.++..+++|..|...|.++.. .. ...|+|.|||..-
T Consensus 101 V~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 101 VRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRIVNVSSILG 174 (314)
T ss_pred HHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCEEEEcCccc
Confidence 555543 68999999997542 24689999999999777766554 32 2269999999754
No 278
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.44 E-value=6.4e-06 Score=82.81 Aligned_cols=134 Identities=13% Similarity=0.133 Sum_probs=82.0
Q ss_pred ccCcEEEEecc--cccccHHHHHHHHhhCCCccEEEEE-cchhHHHHHHHcCCc--------hhhhccCcEEEEEccC--
Q 042694 108 LKAKNFFVTGA--TGFLAKVLIEKILRTVPDVGKIFII-NAELFKCLKQTYGKS--------YQAFMLSKLVPAVGNV-- 174 (554)
Q Consensus 108 ~~~~~VlITGa--TGFlG~~Ll~~LL~~~~~V~~i~~~-~~~~~~~l~~~~~~~--------~~~~~~~kv~~v~GDl-- 174 (554)
++||+++|||| +.-||..+.+.|.+.|.+ |++. +.+..+.+....... ...........+.+|+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~---Vv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAE---ILVGTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCE---EEEEeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 67999999999 678999999999998864 4442 222222222111100 0000011235688898
Q ss_pred CCCC-C-----------CCCHHHHHHHhc-------CccEEEEcCCCC-----Cc----hhhHHHHHHHhchHHHHHHHH
Q 042694 175 CENN-L-----------GLEEDLADVIAK-------EVDVIVNSAANT-----TF----DERYDIAIDINTRGPCRLMEF 226 (554)
Q Consensus 175 ~~~~-l-----------GLs~~~~~~l~~-------~vdiViH~AA~v-----~~----~~~~~~~~~~Nv~gt~~ll~l 226 (554)
+++. + +-++++.+.+.+ .+|++||+||.. .+ .+.++..+++|+.|+..+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 3331 0 011124444432 589999999632 12 347889999999999999888
Q ss_pred HHH-cCCCceEEEEeecee
Q 042694 227 AKQ-CNKLKLFVQVSTAYV 244 (554)
Q Consensus 227 a~~-~~~~k~~v~vST~~v 244 (554)
+.. +.+--++|++||...
T Consensus 164 ~~p~m~~~G~II~isS~a~ 182 (303)
T PLN02730 164 FGPIMNPGGASISLTYIAS 182 (303)
T ss_pred HHHHHhcCCEEEEEechhh
Confidence 765 222258999998643
No 279
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.42 E-value=1.3e-05 Score=79.08 Aligned_cols=127 Identities=22% Similarity=0.276 Sum_probs=86.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+.+|.++||||+.=||+.++++|.+.|. +|++..+ +..+........ ......++.++.+|++++ ++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga---~v~i~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~------~~ 74 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA---KVVITGRSEERLEETAQELGG--LGYTGGKVLAIVCDVSKE------VD 74 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHh--cCCCCCeeEEEECcCCCH------HH
Confidence 6789999999999999999999999876 4444433 222222222111 001245789999999977 44
Q ss_pred HHHHh--------cCccEEEEcCCCCCc--------hhhHHHHHHHhchH-HHHHHHHHHHc---CCCceEEEEeeceec
Q 042694 186 ADVIA--------KEVDVIVNSAANTTF--------DERYDIAIDINTRG-PCRLMEFAKQC---NKLKLFVQVSTAYVN 245 (554)
Q Consensus 186 ~~~l~--------~~vdiViH~AA~v~~--------~~~~~~~~~~Nv~g-t~~ll~la~~~---~~~k~~v~vST~~v~ 245 (554)
.+.+. .++|+++++|+.... .+.|+...++|+.| +..+.+.|..+ .+-..++++||....
T Consensus 75 ~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~ 154 (270)
T KOG0725|consen 75 VEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGV 154 (270)
T ss_pred HHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccc
Confidence 44443 369999999998653 25788999999995 66776666553 133467888876443
No 280
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.40 E-value=9.6e-06 Score=79.16 Aligned_cols=121 Identities=20% Similarity=0.172 Sum_probs=90.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
..+|.|||||+-.=+|..|+.+|.++|..| =.-|+..+..+.++.... .++...++-|++++ +..+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V-~Agcl~~~gae~L~~~~~-------s~rl~t~~LDVT~~------esi~ 92 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRV-FAGCLTEEGAESLRGETK-------SPRLRTLQLDVTKP------ESVK 92 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEE-EEEeecCchHHHHhhhhc-------CCcceeEeeccCCH------HHHH
Confidence 457889999999889999999999998754 233777776666766542 46888889999998 7666
Q ss_pred HHhc---------CccEEEEcCCCCCc--------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeec
Q 042694 188 VIAK---------EVDVIVNSAANTTF--------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTA 242 (554)
Q Consensus 188 ~l~~---------~vdiViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~ 242 (554)
+..+ +.-.|||+||...+ .+.|+...++|..||.++.+.-... +.--|+|+|||.
T Consensus 93 ~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~ 166 (322)
T KOG1610|consen 93 EAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSV 166 (322)
T ss_pred HHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccc
Confidence 6553 46689999996433 3689999999999976665444321 123499999985
No 281
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=98.39 E-value=2.1e-06 Score=79.58 Aligned_cols=225 Identities=17% Similarity=0.245 Sum_probs=132.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc----hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA----ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~----~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
++||++++|||.|-||..+.++|+..+ ++...+.++ +.+..|++..+ ..++.+++.|+++.
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kg--ik~~~i~~~~En~~a~akL~ai~p-------~~~v~F~~~DVt~~------ 67 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKG--IKVLVIDDSEENPEAIAKLQAINP-------SVSVIFIKCDVTNR------ 67 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcC--chheeehhhhhCHHHHHHHhccCC-------CceEEEEEeccccH------
Confidence 468999999999999999999999875 444444432 34555555443 46899999999985
Q ss_pred HHHHHHh-------cCccEEEEcCCCCCchhhHHHHHHHhchHHHH----HHHHHHH-c-CCCceEEEEeeceecccccc
Q 042694 184 DLADVIA-------KEVDVIVNSAANTTFDERYDIAIDINTRGPCR----LMEFAKQ-C-NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 184 ~~~~~l~-------~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~----ll~la~~-~-~~~k~~v~vST~~v~~~~~~ 250 (554)
.+.+... ..+|++|+.|+..+ +.+.+..+.+|..|.-+ .+....+ . +.---+|.+||.+ |..+
T Consensus 68 ~~~~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~--GL~P- 143 (261)
T KOG4169|consen 68 GDLEAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVA--GLDP- 143 (261)
T ss_pred HHHHHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccc--ccCc-
Confidence 4443333 37999999999755 67789999999776444 4444432 1 1223678888753 3211
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhh-hcCCCcEEEEccceeeeccc
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGL-ERGDIPVVIIRPSVIESTCK 329 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~-~~~glp~~I~Rp~~V~g~~~ 329 (554)
.|... .|..+|-. ---++..++..+. ++.|+.+..+-||.+--.-.
T Consensus 144 -------------------------~p~~p------VY~AsKaG--VvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~ 190 (261)
T KOG4169|consen 144 -------------------------MPVFP------VYAASKAG--VVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLA 190 (261)
T ss_pred -------------------------cccch------hhhhcccc--eeeeehhhhhhhhHhhcCEEEEEECCCcchHHHH
Confidence 01111 12222100 0024455555443 56799999999998744322
Q ss_pred CCc---cccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcc
Q 042694 330 EPF---SGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPL 405 (554)
Q Consensus 330 ~p~---~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~i 405 (554)
+.+ -+|.+- ...+ .+.+.. ..--+-..|++.++.+++... ++.+|-+.++..+++
T Consensus 191 ~~~~~~~~~~e~----~~~~----~~~l~~--------~~~q~~~~~a~~~v~aiE~~~-----NGaiw~v~~g~l~~~ 248 (261)
T KOG4169|consen 191 ENIDASGGYLEY----SDSI----KEALER--------APKQSPACCAINIVNAIEYPK-----NGAIWKVDSGSLEPV 248 (261)
T ss_pred HHHHhcCCcccc----cHHH----HHHHHH--------cccCCHHHHHHHHHHHHhhcc-----CCcEEEEecCcEEEe
Confidence 222 222221 0100 111111 123344677888899888733 357888888743333
No 282
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.38 E-value=1.6e-05 Score=71.84 Aligned_cols=178 Identities=19% Similarity=0.207 Sum_probs=114.7
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
..+....+...||||+.-||+.+...|.+.|..| -+.-++....+......+.+ ..-..+.+|++++
T Consensus 8 ~~~r~~sk~~~vtGg~sGIGrAia~~la~~Garv-~v~dl~~~~A~ata~~L~g~------~~h~aF~~DVS~a------ 74 (256)
T KOG1200|consen 8 VVQRLMSKVAAVTGGSSGIGRAIAQLLAKKGARV-AVADLDSAAAEATAGDLGGY------GDHSAFSCDVSKA------ 74 (256)
T ss_pred HHHHHhcceeEEecCCchHHHHHHHHHHhcCcEE-EEeecchhhHHHHHhhcCCC------CccceeeeccCcH------
Confidence 3344567789999999999999999999988765 33333433333322233221 2334689999998
Q ss_pred HHHHHHh-------cCccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHHc---CCC--ceEEEEeecee
Q 042694 184 DLADVIA-------KEVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQC---NKL--KLFVQVSTAYV 244 (554)
Q Consensus 184 ~~~~~l~-------~~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~~---~~~--k~~v~vST~~v 244 (554)
++.+.+. ..++++++||+..+- .+.+++.+.+|..|+..+-+++.+. .+. -++|.|||.-
T Consensus 75 ~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIV- 153 (256)
T KOG1200|consen 75 HDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIV- 153 (256)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhh-
Confidence 5555432 279999999998763 4689999999999999888877552 122 2899999862
Q ss_pred cccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccC--CCCchHHHHHHHhhhhhcCCCcEEEEccc
Q 042694 245 NGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKE--FSTDGEVAQKMKGLGLERGDIPVVIIRPS 322 (554)
Q Consensus 245 ~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~--~~~~k~~ae~l~e~~~~~~glp~~I~Rp~ 322 (554)
|.. |.+.. ..|..+|. -..+|+.++.++. .++++..+-||
T Consensus 154 -Gki-GN~GQ-------------------------------tnYAAsK~GvIgftktaArEla~-----knIrvN~VlPG 195 (256)
T KOG1200|consen 154 -GKI-GNFGQ-------------------------------TNYAASKGGVIGFTKTAARELAR-----KNIRVNVVLPG 195 (256)
T ss_pred -ccc-ccccc-------------------------------hhhhhhcCceeeeeHHHHHHHhh-----cCceEeEeccc
Confidence 211 11111 12333332 2334555554443 48999999999
Q ss_pred eeeecccCCcc
Q 042694 323 VIESTCKEPFS 333 (554)
Q Consensus 323 ~V~g~~~~p~~ 333 (554)
.|-.+..+.+|
T Consensus 196 FI~tpMT~~mp 206 (256)
T KOG1200|consen 196 FIATPMTEAMP 206 (256)
T ss_pred cccChhhhhcC
Confidence 99766555444
No 283
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.36 E-value=1.5e-05 Score=77.86 Aligned_cols=123 Identities=20% Similarity=0.291 Sum_probs=84.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch---hHHHHHHHcCCchhhhcc-CcEEEEEccCCC-CCCCCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE---LFKCLKQTYGKSYQAFML-SKLVPAVGNVCE-NNLGLE 182 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~---~~~~l~~~~~~~~~~~~~-~kv~~v~GDl~~-~~lGLs 182 (554)
..+++||||||++-||+.++++|++.|..| +++.+.. ..+.+.+.... .. ..+.....|+++ +
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dvs~~~----- 70 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARV--VVAARRSEEEAAEALAAAIKE-----AGGGRAAAVAADVSDDE----- 70 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeE--EEEcCCCchhhHHHHHHHHHh-----cCCCcEEEEEecCCCCH-----
Confidence 457899999999999999999999877643 3333321 12222222210 11 467788899997 4
Q ss_pred HHHHHHHhc-------CccEEEEcCCCCC----c----hhhHHHHHHHhchHHHHHHHHHHHcCCCc--eEEEEeeceec
Q 042694 183 EDLADVIAK-------EVDVIVNSAANTT----F----DERYDIAIDINTRGPCRLMEFAKQCNKLK--LFVQVSTAYVN 245 (554)
Q Consensus 183 ~~~~~~l~~-------~vdiViH~AA~v~----~----~~~~~~~~~~Nv~gt~~ll~la~~~~~~k--~~v~vST~~v~ 245 (554)
+..+.+.+ .+|+++|+|+... + .+.++..+++|+.|...+.+++.. ..+ +++.+||....
T Consensus 71 -~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~--~~~~~~Iv~isS~~~~ 147 (251)
T COG1028 71 -ESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALP--LMKKQRIVNISSVAGL 147 (251)
T ss_pred -HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHH--hhhhCeEEEECCchhc
Confidence 44443332 4999999999743 2 257889999999999999984443 344 89999987654
No 284
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.30 E-value=2.7e-07 Score=104.12 Aligned_cols=208 Identities=16% Similarity=0.117 Sum_probs=126.5
Q ss_pred cccccccccCCchhHHHHHHHHHhhhhceee-----ccccceeeCCCC----CCCc----ccccccccccCCCCchhHhh
Q 042694 32 KRSIMHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLVLSPNG----KGHA----EIVVQDLVPFGGQATSLVEL 98 (554)
Q Consensus 32 ~~~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~~~~~~----~~~~----~~~~~~~~~l~~~~~~~~~~ 98 (554)
.++.+||++|||||.|+++...+++++.+.. +..+++.....+ ..+. ..+-..+..-..+.....+.
T Consensus 617 s~d~~fF~lGgdSi~av~~~~~lr~~~~v~~~~~l~~~l~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (1032)
T KOG1178|consen 617 SPDSSFFQLGGDSISAVRLSGLLRKKGYVEGPLGLIFKLLTIVNLESGIIRIKSQEKSSSKLNHKIELKNLKDRTQLSDT 696 (1032)
T ss_pred CCCcchhhhcchhHHHHHHHHhhhhhheeccccccccchhhHHHHHHHHhhhhhhccchhhhhhhhhhccccchhhHhhh
Confidence 4455999999999999999999999988775 133333211000 0000 00000000000000000000
Q ss_pred hc--------ccchhhhccCcE--EEEecccccccHHHHHHHHhhCC---CccEEEEEcch--hHHHHHHHc--CCc--h
Q 042694 99 QD--------GIGIVKFLKAKN--FFVTGATGFLAKVLIEKILRTVP---DVGKIFIINAE--LFKCLKQTY--GKS--Y 159 (554)
Q Consensus 99 ~~--------~~~i~~~~~~~~--VlITGaTGFlG~~Ll~~LL~~~~---~V~~i~~~~~~--~~~~l~~~~--~~~--~ 159 (554)
.+ .....+...+++ +++||.+||+|+..++.++.... .+.....++.. .....+... ..+ +
T Consensus 697 i~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~l~~~~l~~~~~~~~~~~~i~~~~~~~a~~e~a~~~~~~~~i~~~~~~ 776 (1032)
T KOG1178|consen 697 IPKSSPLPLNLSIEVKKSELLTAYVFLTGYTGYLGRRKLSNLVKLSNFFYIILVFALVRASSEEASGGRLQDAIQIYGVL 776 (1032)
T ss_pred ccccccCCCCCccccccccccccceeeeeccceehhhhhhhhhhhhhhhheeeeEEEeccCCchhhccchhchhhhhhhc
Confidence 00 000111112333 89999999999999999987543 12111222221 111111111 110 1
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
.+...-++..+.++++....|+....+..+.++++.++|+++.++...++.+....|+.+|.+.+.++... .+.+..+
T Consensus 777 ~e~~~i~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~v~~~t~~~~~~~~~~~~~~~l~~~l--~~~~~~~ 854 (1032)
T KOG1178|consen 777 NEELLINIIVHLIDLSKSLFGLEDTLWNKLQEPVSIVIHNGALVHEVLRYTELRYPNVIGTITVLPLYSFL--KKKPKDI 854 (1032)
T ss_pred cccccceeeeehhhhhhhhhcccchhhhccccCcceecccccceeeechhhccCCceeeeeeeeeeeeccc--cccceeE
Confidence 22344578889999999999999999999999999999999999999999999999999999999998863 3344444
Q ss_pred ee
Q 042694 240 ST 241 (554)
Q Consensus 240 ST 241 (554)
|+
T Consensus 855 s~ 856 (1032)
T KOG1178|consen 855 SL 856 (1032)
T ss_pred Ee
Confidence 44
No 285
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.28 E-value=2.9e-05 Score=70.93 Aligned_cols=123 Identities=17% Similarity=0.215 Sum_probs=85.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
.|.+||||||+.-||..|.+++++.|..| |+|=++ .++|.+... ....+....+|+.+. +.+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~V--Ii~gR~--e~~L~e~~~------~~p~~~t~v~Dv~d~------~~~~~ 67 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTV--IICGRN--EERLAEAKA------ENPEIHTEVCDVADR------DSRRE 67 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEE--EEecCc--HHHHHHHHh------cCcchheeeecccch------hhHHH
Confidence 47799999999999999999999988654 555444 234444332 133566778898876 54444
Q ss_pred Hh----c---CccEEEEcCCCCC---ch------hhHHHHHHHhchHHHHHHHHHHHc--CC-CceEEEEeeceeccc
Q 042694 189 IA----K---EVDVIVNSAANTT---FD------ERYDIAIDINTRGPCRLMEFAKQC--NK-LKLFVQVSTAYVNGQ 247 (554)
Q Consensus 189 l~----~---~vdiViH~AA~v~---~~------~~~~~~~~~Nv~gt~~ll~la~~~--~~-~k~~v~vST~~v~~~ 247 (554)
+. + +.+++|++||..+ |. +..++-+.+|..++.+|..+...+ .+ -..+|.|||.-.+-+
T Consensus 68 lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvP 145 (245)
T COG3967 68 LVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVP 145 (245)
T ss_pred HHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCc
Confidence 43 2 7999999999854 21 234567889999999888776542 12 347899999655443
No 286
>PRK06720 hypothetical protein; Provisional
Probab=98.25 E-value=1e-05 Score=74.12 Aligned_cols=124 Identities=9% Similarity=0.027 Sum_probs=77.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
++++.++||||+|.||..+++.|++.+. +|++.+.. ..+...+.... ...+..++.+|++++ ++
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~---~V~l~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~------~~ 79 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGA---KVIVTDIDQESGQATVEEITN-----LGGEALFVSYDMEKQ------GD 79 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHh-----cCCcEEEEEccCCCH------HH
Confidence 5789999999999999999999998775 55655532 11111111110 123566789999887 55
Q ss_pred HHHHh-------cCccEEEEcCCCCCc----hh-hHHHHHHHhchHHHHHHHHHHHc----------CCCceEEEEeece
Q 042694 186 ADVIA-------KEVDVIVNSAANTTF----DE-RYDIAIDINTRGPCRLMEFAKQC----------NKLKLFVQVSTAY 243 (554)
Q Consensus 186 ~~~l~-------~~vdiViH~AA~v~~----~~-~~~~~~~~Nv~gt~~ll~la~~~----------~~~k~~v~vST~~ 243 (554)
++.+. .++|++||+||.... .+ +...-...|+.++....+.+... ....+|-.|||..
T Consensus 80 v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (169)
T PRK06720 80 WQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKG 159 (169)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccc
Confidence 55543 369999999986432 22 22222355666665444444321 1245777888776
Q ss_pred ec
Q 042694 244 VN 245 (554)
Q Consensus 244 v~ 245 (554)
+.
T Consensus 160 ~~ 161 (169)
T PRK06720 160 QS 161 (169)
T ss_pred cc
Confidence 53
No 287
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.24 E-value=6.9e-06 Score=75.76 Aligned_cols=102 Identities=15% Similarity=0.141 Sum_probs=67.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+++|||||||+|. ++++|++.|.+| .+...+....+.+....+ ...++.++.+|+.++ ++...++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V-~v~~R~~~~~~~l~~~l~------~~~~i~~~~~Dv~d~------~sv~~~i 66 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHV-SVIARREVKLENVKREST------TPESITPLPLDYHDD------DALKLAI 66 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEE-EEEECCHHHHHHHHHHhh------cCCcEEEEEccCCCH------HHHHHHH
Confidence 47999999999886 999999988755 222212121222222111 134788899999987 6666555
Q ss_pred c-------CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCc----eEEEEeec
Q 042694 191 K-------EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLK----LFVQVSTA 242 (554)
Q Consensus 191 ~-------~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k----~~v~vST~ 242 (554)
+ .+|++|+. +.+.++.++.++|++. +++ +|+|+=..
T Consensus 67 ~~~l~~~g~id~lv~~---------------vh~~~~~~~~~~~~~~-gv~~~~~~~~h~~gs 113 (177)
T PRK08309 67 KSTIEKNGPFDLAVAW---------------IHSSAKDALSVVCREL-DGSSETYRLFHVLGS 113 (177)
T ss_pred HHHHHHcCCCeEEEEe---------------ccccchhhHHHHHHHH-ccCCCCceEEEEeCC
Confidence 3 45666654 3446788999999995 787 88887543
No 288
>PLN00106 malate dehydrogenase
Probab=98.19 E-value=1.1e-05 Score=81.47 Aligned_cols=121 Identities=16% Similarity=0.065 Sum_probs=82.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
.++|.||||+|.+|+.+...|..++ -...+.++|... ......+ ..+ ..... ...+++.. +++...
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~-~~~el~L~Di~~---~~g~a~D-l~~-~~~~~--~i~~~~~~------~d~~~~ 83 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNP-LVSELHLYDIAN---TPGVAAD-VSH-INTPA--QVRGFLGD------DQLGDA 83 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCCEEEEEecCC---CCeeEch-hhh-CCcCc--eEEEEeCC------CCHHHH
Confidence 4689999999999999999887643 445778777432 0000000 000 01111 11122222 445566
Q ss_pred hcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceec
Q 042694 190 AKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVN 245 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~ 245 (554)
++++|+|||+||..+- .....++...|+..++++.+.+++. +.++++.++|.=+.
T Consensus 84 l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD 139 (323)
T PLN00106 84 LKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVN 139 (323)
T ss_pred cCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCcc
Confidence 7899999999998654 4577899999999999999999985 78999999996553
No 289
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.18 E-value=2.2e-05 Score=97.81 Aligned_cols=129 Identities=13% Similarity=0.109 Sum_probs=89.8
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---------------------HHHHHHHcCC--------
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---------------------FKCLKQTYGK-------- 157 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---------------------~~~l~~~~~~-------- 157 (554)
+.++++++||||+|-||..++++|.+++. . +++++.+.. .+.++.....
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~g-a-~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQCQ-A-HFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhcC-C-EEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 45689999999999999999999998742 2 666654320 0001100000
Q ss_pred -------------ch--hhhccCcEEEEEccCCCCCCCCCHHHHHHHhc------CccEEEEcCCCCCc-------hhhH
Q 042694 158 -------------SY--QAFMLSKLVPAVGNVCENNLGLEEDLADVIAK------EVDVIVNSAANTTF-------DERY 209 (554)
Q Consensus 158 -------------~~--~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~------~vdiViH~AA~v~~-------~~~~ 209 (554)
.. ......++.++.+|+++. +..+.+.+ .+|+|||+||.... .+.+
T Consensus 2072 ~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~------~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f 2145 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAAFKAAGASAEYASADVTNS------VSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEF 2145 (2582)
T ss_pred cccccchhHHHHHHHHHHHhcCCcEEEEEccCCCH------HHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHH
Confidence 00 001234788999999997 55554443 58999999997432 3578
Q ss_pred HHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 210 DIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 210 ~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
+..+++|+.|+.++++.+.. ...+.+|++||...
T Consensus 2146 ~~v~~~nv~G~~~Ll~al~~-~~~~~IV~~SSvag 2179 (2582)
T TIGR02813 2146 NAVYGTKVDGLLSLLAALNA-ENIKLLALFSSAAG 2179 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCeEEEEechhh
Confidence 89999999999999999876 35678999999754
No 290
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.13 E-value=1e-05 Score=81.62 Aligned_cols=125 Identities=15% Similarity=0.100 Sum_probs=86.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++|.||||+|.+|+.+...|..++ ....+.++|.. .......+ ..+ ..... ...+.+++ .++.
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~-~~~elvL~Di~---~~~g~a~D-l~~-~~~~~--~v~~~td~------~~~~ 71 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNP-HVSELSLYDIV---GAPGVAAD-LSH-IDTPA--KVTGYADG------ELWE 71 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCC-CCCEEEEEecC---CCcccccc-hhh-cCcCc--eEEEecCC------CchH
Confidence 578899999999999999999887543 34477777751 11110000 000 01111 22344443 4434
Q ss_pred HHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccc
Q 042694 188 VIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~ 247 (554)
..++++|+|+|+|+...- .++..++...|+..++++++..++. ++++++.++|.-+...
T Consensus 72 ~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv~ 131 (321)
T PTZ00325 72 KALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNST 131 (321)
T ss_pred HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHH
Confidence 455899999999998543 4567888999999999999999995 8999999999877554
No 291
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.13 E-value=5.8e-05 Score=75.88 Aligned_cols=134 Identities=15% Similarity=0.166 Sum_probs=75.2
Q ss_pred ccCcEEEEeccc--ccccHHHHHHHHhhCCCccEEEEEcc-hhHHHHHHHcCCc-h-------hhh--ccCcEEEEEccC
Q 042694 108 LKAKNFFVTGAT--GFLAKVLIEKILRTVPDVGKIFIINA-ELFKCLKQTYGKS-Y-------QAF--MLSKLVPAVGNV 174 (554)
Q Consensus 108 ~~~~~VlITGaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~-~~~~~l~~~~~~~-~-------~~~--~~~kv~~v~GDl 174 (554)
++||+++||||+ .-||+.+++.|.++|.+ |++.+. +.++.+++..... . ... ...++..+..|+
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~---Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 82 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGAT---ILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF 82 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCE---EEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence 468999999994 67999999999998864 444321 1111111110000 0 000 000111223333
Q ss_pred CCCC------------CCCCHHHHHHHh-------cCccEEEEcCCCC-----Cc----hhhHHHHHHHhchHHHHHHHH
Q 042694 175 CENN------------LGLEEDLADVIA-------KEVDVIVNSAANT-----TF----DERYDIAIDINTRGPCRLMEF 226 (554)
Q Consensus 175 ~~~~------------lGLs~~~~~~l~-------~~vdiViH~AA~v-----~~----~~~~~~~~~~Nv~gt~~ll~l 226 (554)
++++ --+++++.+.+. ..+|++||+||.. .+ .+.++..+++|+.|+..+.+.
T Consensus 83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a 162 (299)
T PRK06300 83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH 162 (299)
T ss_pred CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 3331 011222233332 3699999999752 22 246788899999999999998
Q ss_pred HHH-cCCCceEEEEeecee
Q 042694 227 AKQ-CNKLKLFVQVSTAYV 244 (554)
Q Consensus 227 a~~-~~~~k~~v~vST~~v 244 (554)
+.. +..-.+++.+||...
T Consensus 163 ~~p~m~~~G~ii~iss~~~ 181 (299)
T PRK06300 163 FGPIMNPGGSTISLTYLAS 181 (299)
T ss_pred HHHHhhcCCeEEEEeehhh
Confidence 865 222246888887533
No 292
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.11 E-value=0.00019 Score=64.57 Aligned_cols=108 Identities=11% Similarity=0.111 Sum_probs=75.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|.|.||||-+|+.++++.+++|++|..|+ +++ ...+ ..+.+.+++.|+.++ +......
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAiv--Rn~------~K~~------~~~~~~i~q~Difd~------~~~a~~l 60 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIV--RNA------SKLA------ARQGVTILQKDIFDL------TSLASDL 60 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEE--eCh------Hhcc------ccccceeecccccCh------hhhHhhh
Confidence 5799999999999999999999999873332 221 1111 125778899999998 7777778
Q ss_pred cCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 191 KEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 191 ~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
.+.|+||..-+.... ++. .........|++..+. .++.|++.|..+++
T Consensus 61 ~g~DaVIsA~~~~~~-~~~----~~~~k~~~~li~~l~~-agv~RllVVGGAGS 108 (211)
T COG2910 61 AGHDAVISAFGAGAS-DND----ELHSKSIEALIEALKG-AGVPRLLVVGGAGS 108 (211)
T ss_pred cCCceEEEeccCCCC-Chh----HHHHHHHHHHHHHHhh-cCCeeEEEEcCccc
Confidence 899999986443211 111 1112236678888877 48899999987755
No 293
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.06 E-value=3e-05 Score=68.76 Aligned_cols=203 Identities=17% Similarity=0.226 Sum_probs=124.1
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-h-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-E-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+++|+.|++||+.--||+.++..|.+.|. +|+.+.+ + -...+.++ ...-|+++.+|++.. +
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA---~ViAvaR~~a~L~sLV~e--------~p~~I~Pi~~Dls~w------e 66 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGA---QVIAVARNEANLLSLVKE--------TPSLIIPIVGDLSAW------E 66 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCC---EEEEEecCHHHHHHHHhh--------CCcceeeeEecccHH------H
Confidence 46799999999988999999999998875 4454433 2 12233332 234589999999876 5
Q ss_pred HHHHHhc---CccEEEEcCCCCC---c----hhhHHHHHHHhchHHHHHHHHHHHc----CCCceEEEEeeceecccccc
Q 042694 185 LADVIAK---EVDVIVNSAANTT---F----DERYDIAIDINTRGPCRLMEFAKQC----NKLKLFVQVSTAYVNGQRRG 250 (554)
Q Consensus 185 ~~~~l~~---~vdiViH~AA~v~---~----~~~~~~~~~~Nv~gt~~ll~la~~~----~~~k~~v~vST~~v~~~~~~ 250 (554)
...++.. .+|-.+++||..- | .+.++..+++|+++...+.++..+. .....+|.+||....-.-.+
T Consensus 67 a~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~n 146 (245)
T KOG1207|consen 67 ALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDN 146 (245)
T ss_pred HHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCC
Confidence 4444443 5899999998532 3 2456677888999988888874431 12236899998755322110
Q ss_pred eeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCch----HHHHHHHhhhhhcCCCcEEEEccceeee
Q 042694 251 KVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDG----EVAQKMKGLGLERGDIPVVIIRPSVIES 326 (554)
Q Consensus 251 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k----~~ae~l~e~~~~~~glp~~I~Rp~~V~g 326 (554)
.. .|..+| .++|.++.+.-.+ .+++..+-|..|.-
T Consensus 147 ---Ht-------------------------------------vYcatKaALDmlTk~lAlELGp~-kIRVNsVNPTVVmT 185 (245)
T KOG1207|consen 147 ---HT-------------------------------------VYCATKAALDMLTKCLALELGPQ-KIRVNSVNPTVVMT 185 (245)
T ss_pred ---ce-------------------------------------EEeecHHHHHHHHHHHHHhhCcc-eeEeeccCCeEEEe
Confidence 00 122222 3556665544332 68888899999875
Q ss_pred cccCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHH
Q 042694 327 TCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQ 383 (554)
Q Consensus 327 ~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~ 383 (554)
... -..|.|... .++++ ..+| .--|.-||.|+++++-+..+
T Consensus 186 ~MG--~dnWSDP~K-~k~mL--------~riP-----l~rFaEV~eVVnA~lfLLSd 226 (245)
T KOG1207|consen 186 DMG--RDNWSDPDK-KKKML--------DRIP-----LKRFAEVDEVVNAVLFLLSD 226 (245)
T ss_pred ccc--ccccCCchh-ccchh--------hhCc-----hhhhhHHHHHHhhheeeeec
Confidence 432 246765421 11111 1111 11356688999987766544
No 294
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.99 E-value=9.4e-05 Score=71.99 Aligned_cols=211 Identities=18% Similarity=0.234 Sum_probs=124.8
Q ss_pred ccc--ccccHHHHHHHHhhCCCccEEEEEcchh------HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 117 GAT--GFLAKVLIEKILRTVPDVGKIFIINAEL------FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 117 GaT--GFlG~~Ll~~LL~~~~~V~~i~~~~~~~------~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
|++ +-||..++++|++.|. +|++.+... .+.+.++.+ .+ ++.+|++++ ++.+.
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga---~V~~~~~~~~~~~~~~~~l~~~~~--------~~--~~~~D~~~~------~~v~~ 61 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGA---NVILTDRNEEKLADALEELAKEYG--------AE--VIQCDLSDE------ESVEA 61 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTE---EEEEEESSHHHHHHHHHHHHHHTT--------SE--EEESCTTSH------HHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCC---EEEEEeCChHHHHHHHHHHHHHcC--------Cc--eEeecCcch------HHHHH
Confidence 566 8899999999999886 455554321 223333222 23 499999987 77766
Q ss_pred H-------h-cCccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeeceecccc
Q 042694 189 I-------A-KEVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTAYVNGQR 248 (554)
Q Consensus 189 l-------~-~~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~~v~~~~ 248 (554)
+ . ..+|++||+++.... .+.+...+++|+.+...+++.+... ..-.++|++||.......
T Consensus 62 ~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~ 141 (241)
T PF13561_consen 62 LFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM 141 (241)
T ss_dssp HHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS
T ss_pred HHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC
Confidence 6 3 468999999987553 2467889999999999999988542 233589999987442221
Q ss_pred cceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecc
Q 042694 249 RGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTC 328 (554)
Q Consensus 249 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~ 328 (554)
+....+...+..+ ..+++.++.+...+.|+++..+.||.|-.+.
T Consensus 142 ----------------------------~~~~~y~~sKaal--------~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~ 185 (241)
T PF13561_consen 142 ----------------------------PGYSAYSASKAAL--------EGLTRSLAKELAPKKGIRVNAVSPGPIETPM 185 (241)
T ss_dssp ----------------------------TTTHHHHHHHHHH--------HHHHHHHHHHHGGHGTEEEEEEEESSBSSHH
T ss_pred ----------------------------ccchhhHHHHHHH--------HHHHHHHHHHhccccCeeeeeecccceeccc
Confidence 1111222222222 1345556555554248999999999986432
Q ss_pred cCCccccccCCCCccceeeeeccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCCCCCeEEEeeCC
Q 042694 329 KEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQKPDINVYQIASS 400 (554)
Q Consensus 329 ~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~~~~~vyn~~~~ 400 (554)
....++. ....... .... |- --+...+|||+++..++..... --.+++..+.++
T Consensus 186 ~~~~~~~-------~~~~~~~-~~~~------pl--~r~~~~~evA~~v~fL~s~~a~--~itG~~i~vDGG 239 (241)
T PF13561_consen 186 TERIPGN-------EEFLEEL-KKRI------PL--GRLGTPEEVANAVLFLASDAAS--YITGQVIPVDGG 239 (241)
T ss_dssp HHHHHTH-------HHHHHHH-HHHS------TT--SSHBEHHHHHHHHHHHHSGGGT--TGTSEEEEESTT
T ss_pred hhccccc-------cchhhhh-hhhh------cc--CCCcCHHHHHHHHHHHhCcccc--CccCCeEEECCC
Confidence 1111110 0000000 0000 11 1245778999999888765421 123567776654
No 295
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.97 E-value=0.00051 Score=67.20 Aligned_cols=124 Identities=18% Similarity=0.177 Sum_probs=83.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
++|+||||+--+|..+...+.+++.+| ++..-..+....+.+.... ......+....+|+.+- +....++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~V-ti~ar~~~kl~~a~~~l~l---~~~~~~v~~~S~d~~~Y------~~v~~~~ 103 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADV-TITARSGKKLLEAKAELEL---LTQVEDVSYKSVDVIDY------DSVSKVI 103 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCce-EEEeccHHHHHHHHhhhhh---hhccceeeEeccccccH------HHHHHHH
Confidence 589999999999999999999999877 4444443333333332221 11223467889999554 3333333
Q ss_pred -------cCccEEEEcCCCCC---c----hhhHHHHHHHhchHHHHHHHHHHH-cCCCc---eEEEEeecee
Q 042694 191 -------KEVDVIVNSAANTT---F----DERYDIAIDINTRGPCRLMEFAKQ-CNKLK---LFVQVSTAYV 244 (554)
Q Consensus 191 -------~~vdiViH~AA~v~---~----~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k---~~v~vST~~v 244 (554)
-.+|.+||||+..- | .+..+...++|..||.++++.+.. ++... +++.+||...
T Consensus 104 ~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a 175 (331)
T KOG1210|consen 104 EELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLA 175 (331)
T ss_pred hhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhh
Confidence 26899999998632 2 245778999999999999988753 33333 7888887644
No 296
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.96 E-value=1.6e-05 Score=77.53 Aligned_cols=72 Identities=14% Similarity=0.052 Sum_probs=57.0
Q ss_pred EEEEccCCCCCCCCCHHHHHHHhc----CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHc-CCCceEEEEeec
Q 042694 168 VPAVGNVCENNLGLEEDLADVIAK----EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQC-NKLKLFVQVSTA 242 (554)
Q Consensus 168 ~~v~GDl~~~~lGLs~~~~~~l~~----~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~-~~~k~~v~vST~ 242 (554)
..+.+|+++. ++.+.+.+ ++|+|||+||... ..+++..+++|+.|+..+++++... .+-.++|++||.
T Consensus 26 ~~~~~Dl~~~------~~v~~~~~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~ 98 (241)
T PRK12428 26 GFIQADLGDP------ASIDAAVAALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASL 98 (241)
T ss_pred HhhcccCCCH------HHHHHHHHHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcH
Confidence 3578899887 66666655 5899999999754 3568899999999999999998752 223689999999
Q ss_pred eecc
Q 042694 243 YVNG 246 (554)
Q Consensus 243 ~v~~ 246 (554)
..++
T Consensus 99 ~~~~ 102 (241)
T PRK12428 99 AGAE 102 (241)
T ss_pred Hhhc
Confidence 8765
No 297
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=97.96 E-value=0.00019 Score=66.82 Aligned_cols=124 Identities=16% Similarity=0.183 Sum_probs=80.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
.++||||||.--||--|+++|++ .+++..++.-.+..-...++ ... .....+++++++-|++.. +.++.+
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk-~~~i~~iiat~r~~e~a~~~-l~~--k~~~d~rvHii~Ldvt~d------eS~~~~ 72 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLK-DKGIEVIIATARDPEKAATE-LAL--KSKSDSRVHIIQLDVTCD------ESIDNF 72 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhc-CCCcEEEEEecCChHHhhHH-HHH--hhccCCceEEEEEecccH------HHHHHH
Confidence 46799999999999999999997 46675555443311111111 111 011367999999999876 544444
Q ss_pred h---------cCccEEEEcCCCCC-c-------hhhHHHHHHHhchHHHHHHHHH----HHcCCC-----------ceEE
Q 042694 190 A---------KEVDVIVNSAANTT-F-------DERYDIAIDINTRGPCRLMEFA----KQCNKL-----------KLFV 237 (554)
Q Consensus 190 ~---------~~vdiViH~AA~v~-~-------~~~~~~~~~~Nv~gt~~ll~la----~~~~~~-----------k~~v 237 (554)
. ++.|+.+++||... + ...+-..+++|+.|+..+.+.. ++ ... ..+|
T Consensus 73 ~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkk-aas~~~gd~~s~~raaIi 151 (249)
T KOG1611|consen 73 VQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKK-AASKVSGDGLSVSRAAII 151 (249)
T ss_pred HHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHH-HhhcccCCcccccceeEE
Confidence 3 37899999999743 2 2346688999999876655443 22 122 2788
Q ss_pred EEeecee
Q 042694 238 QVSTAYV 244 (554)
Q Consensus 238 ~vST~~v 244 (554)
++||...
T Consensus 152 nisS~~~ 158 (249)
T KOG1611|consen 152 NISSSAG 158 (249)
T ss_pred Eeecccc
Confidence 8887644
No 298
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.95 E-value=3.3e-05 Score=78.36 Aligned_cols=121 Identities=18% Similarity=0.097 Sum_probs=72.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCC----CccEEEEEcchhH-HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVP----DVGKIFIINAELF-KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~----~V~~i~~~~~~~~-~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+.+|+||||+|++|++++..|+..+- .-..|++++.... +.+.. .... ..+-..+..+|+... .
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g-~~~D----l~d~~~~~~~~~~~~------~ 70 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEG-VVME----LQDCAFPLLKSVVAT------T 70 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccc-eeee----hhhccccccCCceec------C
Confidence 34799999999999999999987431 0116777764211 00100 0000 000000112232222 4
Q ss_pred HHHHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 185 LADVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
++...++++|+|||+|+..+- .++..++.+.|+.-.+++.+...++.....++.+-|
T Consensus 71 ~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvs 128 (325)
T cd01336 71 DPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVG 128 (325)
T ss_pred CHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 444555799999999998654 456678999999999999888777532344444433
No 299
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=97.94 E-value=0.00011 Score=67.91 Aligned_cols=162 Identities=15% Similarity=0.099 Sum_probs=101.5
Q ss_pred HHHHHhchHHHHHHHHHHHcCCC-ceEEEEeeceecccccceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhh
Q 042694 211 IAIDINTRGPCRLMEFAKQCNKL-KLFVQVSTAYVNGQRRGKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLAL 289 (554)
Q Consensus 211 ~~~~~Nv~gt~~ll~la~~~~~~-k~~v~vST~~v~~~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 289 (554)
+....-+..|..|.++....+.. +++|.+|..++|-... .+.|++... ....|+...+-.
T Consensus 99 ev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~----s~eY~e~~~-------------~qgfd~~srL~l-- 159 (315)
T KOG3019|consen 99 EVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSE----SQEYSEKIV-------------HQGFDILSRLCL-- 159 (315)
T ss_pred HhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccc----ccccccccc-------------cCChHHHHHHHH--
Confidence 44444556688888888776654 5999999998887642 223433221 012222111100
Q ss_pred hccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccCCccccccCCCCccceeeeeccceeeeeecCCCcccccch
Q 042694 290 ESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKEPFSGWMEGNRMMDPIILYYGKGQLTGFLVDPNGILDVVP 369 (554)
Q Consensus 290 ~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~p~~g~~~~~~~~~~i~~~~~~G~~~~~~~~~~~~~d~vp 369 (554)
+|. ..+.. ......++++|.|.|.|.....+...+ -+ +.+...|-+ ++++..+.|||
T Consensus 160 --------~WE--~aA~~--~~~~~r~~~iR~GvVlG~gGGa~~~M~------lp-F~~g~GGPl----GsG~Q~fpWIH 216 (315)
T KOG3019|consen 160 --------EWE--GAALK--ANKDVRVALIRIGVVLGKGGGALAMMI------LP-FQMGAGGPL----GSGQQWFPWIH 216 (315)
T ss_pred --------HHH--HHhhc--cCcceeEEEEEEeEEEecCCcchhhhh------hh-hhhccCCcC----CCCCeeeeeee
Confidence 111 11111 123589999999999996553221111 11 111112333 67788899999
Q ss_pred hhHHHHHHHHHHHHhcccCCCCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 370 ADMVVNATLAAIAQHGMIQKPDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 370 VD~va~aii~~~~~~~~~~~~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
+||+++.|..+++.+.. ..+.|-+.+ ++.+..|+.+.+.+.++++
T Consensus 217 v~DL~~li~~ale~~~v-----~GViNgvAP--~~~~n~Ef~q~lg~aL~Rp 261 (315)
T KOG3019|consen 217 VDDLVNLIYEALENPSV-----KGVINGVAP--NPVRNGEFCQQLGSALSRP 261 (315)
T ss_pred hHHHHHHHHHHHhcCCC-----CceecccCC--CccchHHHHHHHHHHhCCC
Confidence 99999999998887554 358898888 8999999999999998864
No 300
>PRK09620 hypothetical protein; Provisional
Probab=97.93 E-value=9.7e-06 Score=77.83 Aligned_cols=82 Identities=18% Similarity=0.286 Sum_probs=51.8
Q ss_pred cCcEEEEeccc----------------ccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEc
Q 042694 109 KAKNFFVTGAT----------------GFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVG 172 (554)
Q Consensus 109 ~~~~VlITGaT----------------GFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~G 172 (554)
+|++||||+|- ||+|++|++.|+++|.+| ++++.... ..+...+ ...++..+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V---~li~g~~~-----~~~~~~~--~~~~~~~V~s 71 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHV---IYLHGYFA-----EKPNDIN--NQLELHPFEG 71 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeE---EEEeCCCc-----CCCcccC--CceeEEEEec
Confidence 68999999774 999999999999998754 44443211 0000000 0123445666
Q ss_pred cCCCCCCCCCHHHHHHHhc--CccEEEEcCCCCCch
Q 042694 173 NVCENNLGLEEDLADVIAK--EVDVIVNSAANTTFD 206 (554)
Q Consensus 173 Dl~~~~lGLs~~~~~~l~~--~vdiViH~AA~v~~~ 206 (554)
|.... +.+..+.+ ++|+|||+||...|.
T Consensus 72 ~~d~~------~~l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 72 IIDLQ------DKMKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred HHHHH------HHHHHHhcccCCCEEEECcccccee
Confidence 43322 34455553 689999999997774
No 301
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.49 E-value=0.00031 Score=71.13 Aligned_cols=77 Identities=18% Similarity=0.196 Sum_probs=51.6
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.+++++|+||||||++|+.++++|++. ..+++++++++. ..++..... .+ ..+|+ .++
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~-~gv~~lilv~R~-~~rl~~La~---------el--~~~~i---------~~l 209 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAK-TGVAELLLVARQ-QERLQELQA---------EL--GGGKI---------LSL 209 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhh-CCCCEEEEEcCC-HHHHHHHHH---------Hh--ccccH---------HhH
Confidence 468899999999999999999999864 235678877653 223322111 00 11333 234
Q ss_pred HHHhcCccEEEEcCCCCCc
Q 042694 187 DVIAKEVDVIVNSAANTTF 205 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~ 205 (554)
.....++|+|||+++..+.
T Consensus 210 ~~~l~~aDiVv~~ts~~~~ 228 (340)
T PRK14982 210 EEALPEADIVVWVASMPKG 228 (340)
T ss_pred HHHHccCCEEEECCcCCcC
Confidence 4566789999999998654
No 302
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.44 E-value=0.0023 Score=62.71 Aligned_cols=168 Identities=15% Similarity=0.155 Sum_probs=105.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
+=..|||||.-||+...++|.++|.+ |+++.+ +..+++.++-.+. ..-.+..+..|.++++ ++++.
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~n---vvLIsRt~~KL~~v~kEI~~~----~~vev~~i~~Dft~~~-----~~ye~ 117 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFN---VVLISRTQEKLEAVAKEIEEK----YKVEVRIIAIDFTKGD-----EVYEK 117 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCE---EEEEeCCHHHHHHHHHHHHHH----hCcEEEEEEEecCCCc-----hhHHH
Confidence 55799999999999999999998874 565543 3455555554321 2346788999999983 34555
Q ss_pred Hhc-----CccEEEEcCCCCC-----ch----hhHHHHHHHhchHHHHHHHHHHH-c--CCCceEEEEeeceecccccce
Q 042694 189 IAK-----EVDVIVNSAANTT-----FD----ERYDIAIDINTRGPCRLMEFAKQ-C--NKLKLFVQVSTAYVNGQRRGK 251 (554)
Q Consensus 189 l~~-----~vdiViH~AA~v~-----~~----~~~~~~~~~Nv~gt~~ll~la~~-~--~~~k~~v~vST~~v~~~~~~~ 251 (554)
+.+ ++-+.|++++... |. +.++....+|+.++..+.+.-.. | .+--.++++||..-.-+
T Consensus 118 i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p---- 193 (312)
T KOG1014|consen 118 LLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP---- 193 (312)
T ss_pred HHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc----
Confidence 543 6789999999754 21 13455666788887777666542 1 13347888887532111
Q ss_pred eeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeec
Q 042694 252 VMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIEST 327 (554)
Q Consensus 252 i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~ 327 (554)
.|.. ..|..+|.| -.++++.+.+++.. .|+-+-.+=|..|.+.
T Consensus 194 ------------------------~p~~------s~ysasK~~--v~~~S~~L~~Ey~~-~gI~Vq~v~p~~VaTk 236 (312)
T KOG1014|consen 194 ------------------------TPLL------SVYSASKAF--VDFFSRCLQKEYES-KGIFVQSVIPYLVATK 236 (312)
T ss_pred ------------------------ChhH------HHHHHHHHH--HHHHHHHHHHHHHh-cCeEEEEeehhheecc
Confidence 1111 122222221 13667777776654 3788888888887653
No 303
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.38 E-value=0.00085 Score=68.82 Aligned_cols=98 Identities=17% Similarity=0.243 Sum_probs=72.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++|+|.|| |++|+.++.+|.+++. .+|++.++.. -+++... ...++++++.|..+. +...
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~~~~i~~~--------~~~~v~~~~vD~~d~------~al~ 63 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEKCARIAEL--------IGGKVEALQVDAADV------DALV 63 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHHHHHHHhh--------ccccceeEEecccCh------HHHH
Confidence 478999999 9999999999999763 4788776542 2333322 234899999999998 8888
Q ss_pred HHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeece
Q 042694 188 VIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAY 243 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~ 243 (554)
.++++.|+|||++.... +..++++|.+. + ..|+-|++
T Consensus 64 ~li~~~d~VIn~~p~~~---------------~~~i~ka~i~~-g---v~yvDts~ 100 (389)
T COG1748 64 ALIKDFDLVINAAPPFV---------------DLTILKACIKT-G---VDYVDTSY 100 (389)
T ss_pred HHHhcCCEEEEeCCchh---------------hHHHHHHHHHh-C---CCEEEccc
Confidence 88899999999987511 22688888874 3 34555543
No 304
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.38 E-value=0.00054 Score=60.75 Aligned_cols=123 Identities=19% Similarity=0.181 Sum_probs=84.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.+|-.-+||||..-||+.-.|.|.++|.. +.+++- +.-+...++ ...++++.+.|++.+ ++
T Consensus 7 ~kglvalvtggasglg~ataerlakqgas---v~lldlp~skg~~vake--------lg~~~vf~padvtse------kd 69 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGAS---VALLDLPQSKGADVAKE--------LGGKVVFTPADVTSE------KD 69 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCce---EEEEeCCcccchHHHHH--------hCCceEEeccccCcH------HH
Confidence 46777899999999999999999998864 444442 211222222 346899999999876 55
Q ss_pred HHHHh-------cCccEEEEcCCCCC------c-------hhhHHHHHHHhchHHHHHHHHHHH-cC------CCceEEE
Q 042694 186 ADVIA-------KEVDVIVNSAANTT------F-------DERYDIAIDINTRGPCRLMEFAKQ-CN------KLKLFVQ 238 (554)
Q Consensus 186 ~~~l~-------~~vdiViH~AA~v~------~-------~~~~~~~~~~Nv~gt~~ll~la~~-~~------~~k~~v~ 238 (554)
.+..+ .+.|+.++||++.- + .++++..+++|+.||.|++++... |+ +-++=|.
T Consensus 70 v~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgvi 149 (260)
T KOG1199|consen 70 VRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVI 149 (260)
T ss_pred HHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEE
Confidence 44332 27999999998731 1 356778888999999999998753 21 2245566
Q ss_pred Eeeceeccc
Q 042694 239 VSTAYVNGQ 247 (554)
Q Consensus 239 vST~~v~~~ 247 (554)
+-|++|...
T Consensus 150 intasvaaf 158 (260)
T KOG1199|consen 150 INTASVAAF 158 (260)
T ss_pred Eeeceeeee
Confidence 666666443
No 305
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.31 E-value=0.0057 Score=57.20 Aligned_cols=121 Identities=19% Similarity=0.138 Sum_probs=75.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC---CH--H
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL---EE--D 184 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL---s~--~ 184 (554)
++-|||||++--||..++..++..+.+. . +.-..... ...+.+.+..||.....-|. +. +
T Consensus 6 r~villTGaSrgiG~~~v~~i~aed~e~-~----------r~g~~r~~----a~~~~L~v~~gd~~v~~~g~~~e~~~l~ 70 (253)
T KOG1204|consen 6 RKVILLTGASRGIGTGSVATILAEDDEA-L----------RYGVARLL----AELEGLKVAYGDDFVHVVGDITEEQLLG 70 (253)
T ss_pred ceEEEEecCCCCccHHHHHHHHhcchHH-H----------HHhhhccc----ccccceEEEecCCcceechHHHHHHHHH
Confidence 4678999999999999998888765443 1 11111111 01345555555544332221 11 1
Q ss_pred HHHHHhc----CccEEEEcCCCCCc----------hhhHHHHHHHhchHHHHHHHHHHH-cCCC---ceEEEEeeceec
Q 042694 185 LADVIAK----EVDVIVNSAANTTF----------DERYDIAIDINTRGPCRLMEFAKQ-CNKL---KLFVQVSTAYVN 245 (554)
Q Consensus 185 ~~~~l~~----~vdiViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~---k~~v~vST~~v~ 245 (554)
+..++.+ +-|+|||+||.... ...++.+++.|+.+...|...+.. .++. +-+|+|||..+.
T Consensus 71 al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav 149 (253)
T KOG1204|consen 71 ALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV 149 (253)
T ss_pred HHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh
Confidence 2222221 68999999998542 246789999999999999887764 2222 568999997553
No 306
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.29 E-value=0.0006 Score=65.68 Aligned_cols=98 Identities=17% Similarity=0.177 Sum_probs=54.3
Q ss_pred EEe-cccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcC
Q 042694 114 FVT-GATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKE 192 (554)
Q Consensus 114 lIT-GaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~ 192 (554)
+|| .+|||+|++|++.|+++|.+| +++.+.. . ..+. ...++..+..+-.+.. .+......++
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~G~~V---~li~r~~--~---~~~~-----~~~~v~~i~v~s~~~m----~~~l~~~~~~ 81 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAAGHEV---TLVTTKT--A---VKPE-----PHPNLSIIEIENVDDL----LETLEPLVKD 81 (229)
T ss_pred eecCccchHHHHHHHHHHHhCCCEE---EEEECcc--c---ccCC-----CCCCeEEEEEecHHHH----HHHHHHHhcC
Confidence 444 689999999999999988754 4443221 0 0000 1134555553322110 1234445568
Q ss_pred ccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHH
Q 042694 193 VDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQ 229 (554)
Q Consensus 193 vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~ 229 (554)
+|+|||+||...+.. ....-..+...+.++.++++.
T Consensus 82 ~DivIh~AAvsd~~~-~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 82 HDVLIHSMAVSDYTP-VYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred CCEEEeCCccCCcee-hhhhhhhhhhhhhhhhhhhcc
Confidence 999999999876532 222223344455556666543
No 307
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.23 E-value=0.0025 Score=58.81 Aligned_cols=119 Identities=17% Similarity=0.187 Sum_probs=81.7
Q ss_pred CcEEEEecc-cccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 110 AKNFFVTGA-TGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 110 ~~~VlITGa-TGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.+.|+|||+ .|-||..|.+++-+.|. .||...+ +..+.|.. ..++.+..-|++++ +..
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~---~V~AtaR~~e~M~~L~~----------~~gl~~~kLDV~~~------~~V 67 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGY---LVYATARRLEPMAQLAI----------QFGLKPYKLDVSKP------EEV 67 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCe---EEEEEccccchHhhHHH----------hhCCeeEEeccCCh------HHH
Confidence 468999875 68999999999999887 4554332 22333322 24678899999998 554
Q ss_pred HHHhc--------CccEEEEcCCCCC-c------hhhHHHHHHHhchHHHHHHHHHHHc--CCCceEEEEeeceeccc
Q 042694 187 DVIAK--------EVDVIVNSAANTT-F------DERYDIAIDINTRGPCRLMEFAKQC--NKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 187 ~~l~~--------~vdiViH~AA~v~-~------~~~~~~~~~~Nv~gt~~ll~la~~~--~~~k~~v~vST~~v~~~ 247 (554)
.++.. ..|+.+++|+.-. + .+.-+...++||.|..++.++...+ +.-..+|++.|..++.+
T Consensus 68 ~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vp 145 (289)
T KOG1209|consen 68 VTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVP 145 (289)
T ss_pred HHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEec
Confidence 44432 5799999998632 2 3467789999999977776665432 22337899988766543
No 308
>PRK05086 malate dehydrogenase; Provisional
Probab=97.17 E-value=0.003 Score=63.88 Aligned_cols=120 Identities=15% Similarity=0.094 Sum_probs=76.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|+|.||||.+|++++..|.........+++++.... .....-+.. .......+.| .. .+++...+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~---~~g~alDl~--~~~~~~~i~~--~~------~~d~~~~l 67 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV---TPGVAVDLS--HIPTAVKIKG--FS------GEDPTPAL 67 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC---Ccceehhhh--cCCCCceEEE--eC------CCCHHHHc
Confidence 58999999999999999988653333445666664211 000000000 0011112223 10 13433344
Q ss_pred cCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 191 KEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 191 ~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
+++|+||-+++..+- .++...+...|+..++++++..++. +.++++.+.|-=+
T Consensus 68 ~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvsNP~ 121 (312)
T PRK05086 68 EGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIITNPV 121 (312)
T ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCch
Confidence 789999999998543 3456788999999999999999985 7889998888433
No 309
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.16 E-value=0.0029 Score=66.24 Aligned_cols=99 Identities=16% Similarity=0.228 Sum_probs=64.5
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcC
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKE 192 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~ 192 (554)
|+|.|| |++|+.+++.|+++.+ +.+|++.++. .+++++.... ....++..+..|+.++ +.+..++++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~-~~~v~va~r~-~~~~~~~~~~----~~~~~~~~~~~d~~~~------~~l~~~~~~ 67 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGP-FEEVTVADRN-PEKAERLAEK----LLGDRVEAVQVDVNDP------ESLAELLRG 67 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTC-E-EEEEEESS-HHHHHHHHT------TTTTEEEEE--TTTH------HHHHHHHTT
T ss_pred CEEEcC-cHHHHHHHHHHhcCCC-CCcEEEEECC-HHHHHHHHhh----ccccceeEEEEecCCH------HHHHHHHhc
Confidence 789999 9999999999998653 4467766643 2233222211 0246899999999988 779999999
Q ss_pred ccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeece
Q 042694 193 VDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAY 243 (554)
Q Consensus 193 vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~ 243 (554)
.|+||||++.. + ...++++|.+. + .+|+.+.+
T Consensus 68 ~dvVin~~gp~-~--------------~~~v~~~~i~~-g---~~yvD~~~ 99 (386)
T PF03435_consen 68 CDVVINCAGPF-F--------------GEPVARACIEA-G---VHYVDTSY 99 (386)
T ss_dssp SSEEEE-SSGG-G--------------HHHHHHHHHHH-T----EEEESS-
T ss_pred CCEEEECCccc-h--------------hHHHHHHHHHh-C---CCeeccch
Confidence 99999999863 1 23578888875 3 46666544
No 310
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.16 E-value=0.0013 Score=65.19 Aligned_cols=87 Identities=21% Similarity=0.329 Sum_probs=58.2
Q ss_pred EEEEecccccccHHHHHHHHhhC--CCccEEEEE--cch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILRTV--PDVGKIFII--NAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~--~~V~~i~~~--~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
-+.|-|||||-|+++++++++.. ++. .+-+- +.. ..+.|+... ........+.+ ++.+|.+++ +.+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~-slavAGRn~~KL~~vL~~~~-~k~~~~ls~~~-i~i~D~~n~------~Sl 77 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGL-SLAVAGRNEKKLQEVLEKVG-EKTGTDLSSSV-ILIADSANE------ASL 77 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCc-eEEEecCCHHHHHHHHHHHh-hccCCCcccce-EEEecCCCH------HHH
Confidence 47999999999999999999832 222 22222 112 222222222 21111233444 888999998 999
Q ss_pred HHHhcCccEEEEcCCCCCchh
Q 042694 187 DVIAKEVDVIVNSAANTTFDE 207 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~~~ 207 (554)
.++++.+.+|+||++.-+|..
T Consensus 78 ~emak~~~vivN~vGPyR~hG 98 (423)
T KOG2733|consen 78 DEMAKQARVIVNCVGPYRFHG 98 (423)
T ss_pred HHHHhhhEEEEeccccceecC
Confidence 999999999999999987743
No 311
>PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups []. The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A ....
Probab=97.09 E-value=0.0004 Score=52.81 Aligned_cols=29 Identities=14% Similarity=0.017 Sum_probs=27.3
Q ss_pred cccccccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+||++|+|||.+++|...+++++|+.+
T Consensus 21 ~~~~~~lG~DSl~~~~l~~~l~~~~g~~i 49 (67)
T PF00550_consen 21 DTDFFDLGLDSLDAIELVSELEEEFGIKI 49 (67)
T ss_dssp TSBTTTTTSSHHHHHHHHHHHHHHHTSST
T ss_pred CCCHHHhCCchHHHHHHHHHHHHHHcCCC
Confidence 34999999999999999999999999988
No 312
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.05 E-value=0.0052 Score=62.33 Aligned_cols=113 Identities=19% Similarity=0.098 Sum_probs=73.1
Q ss_pred EEEEecccccccHHHHHHHHhhCCCcc-----EEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC-----
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVG-----KIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL----- 181 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~-----~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL----- 181 (554)
+|.||||+|.+|+.++..|+..+ -+. .++++|.... .++......|+.+....+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~-~~~~~~~~~l~L~Di~~~---------------~~~~~g~~~Dl~d~~~~~~~~~~ 65 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGE-LFGDDQPVILHLLDIPPA---------------MKALEGVVMELQDCAFPLLKGVV 65 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCC-ccCCCCceEEEEEecCCc---------------cCccceeeeehhhhcccccCCcE
Confidence 68999999999999999888643 232 3666664210 012233444555442111
Q ss_pred -CHHHHHHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 182 -EEDLADVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 182 -s~~~~~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
...++ ..++++|+|+|+|+..+- .++-.++...|+.-.+++....+++.+...++.+-|
T Consensus 66 i~~~~~-~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 66 ITTDPE-EAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred EecChH-HHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 12333 445799999999997543 456778899999999999988887533444444433
No 313
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.02 E-value=0.0019 Score=60.70 Aligned_cols=82 Identities=16% Similarity=0.184 Sum_probs=52.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++++|+|+||||.+|+.+++.|.+.+. +|+++.+. .+++.+.... ... ........+|..+. ++..
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~---~V~l~~R~-~~~~~~l~~~-l~~--~~~~~~~~~~~~~~------~~~~ 92 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA---RVVLVGRD-LERAQKAADS-LRA--RFGEGVGAVETSDD------AARA 92 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCC-HHHHHHHHHH-HHh--hcCCcEEEeeCCCH------HHHH
Confidence 4678999999999999999999998664 55555433 2333221110 000 01223345566554 6777
Q ss_pred HHhcCccEEEEcCCC
Q 042694 188 VIAKEVDVIVNSAAN 202 (554)
Q Consensus 188 ~l~~~vdiViH~AA~ 202 (554)
...+++|+||++.+.
T Consensus 93 ~~~~~~diVi~at~~ 107 (194)
T cd01078 93 AAIKGADVVFAAGAA 107 (194)
T ss_pred HHHhcCCEEEECCCC
Confidence 777899999998765
No 314
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.00 E-value=0.0067 Score=61.53 Aligned_cols=178 Identities=15% Similarity=0.093 Sum_probs=99.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCcc-----EEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCC---C-
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVG-----KIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENN---L- 179 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~-----~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~---l- 179 (554)
.++|.|+||+|.+|..++..|+..+- .. .++++|.. ..++ .....-|+.+-. +
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~----------------a~g~a~Dl~~~~~~~~~ 64 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEM-FGPDQPVILQLLELPQALKA----------------LEGVAMELEDCAFPLLA 64 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEEecCCcccc----------------cceeehhhhhccccccC
Confidence 56899999999999999999986432 33 67777742 1111 111111221110 0
Q ss_pred --CCCHHHHHHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccc
Q 042694 180 --GLEEDLADVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKP 256 (554)
Q Consensus 180 --GLs~~~~~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~ 256 (554)
-....+++. ++++|+||-+|+..+ ..++-.++...|+.-.+++.....+......++.+-|--|.-...-......
T Consensus 65 ~~~i~~~~~~~-~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg 143 (322)
T cd01338 65 EIVITDDPNVA-FKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAP 143 (322)
T ss_pred ceEEecCcHHH-hCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcC
Confidence 001123333 379999999999744 3456678899999999999998887532244444444212111000000000
Q ss_pred -cCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEccceeeecccC-Cccc
Q 042694 257 -FCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVIESTCKE-PFSG 334 (554)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V~g~~~~-p~~g 334 (554)
+ |+ .+.++.++.-+.++.....++.|++...+|..+|+|...+ -+|.
T Consensus 144 ~~-------------------p~------------~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~s~vp~ 192 (322)
T cd01338 144 DI-------------------PP------------DNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSPTQYPD 192 (322)
T ss_pred CC-------------------Ch------------HheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcccEEEe
Confidence 0 00 0012223445556655555667899999999898886543 2444
Q ss_pred cc
Q 042694 335 WM 336 (554)
Q Consensus 335 ~~ 336 (554)
|.
T Consensus 193 ~S 194 (322)
T cd01338 193 FT 194 (322)
T ss_pred hh
Confidence 43
No 315
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=96.77 E-value=0.01 Score=60.27 Aligned_cols=113 Identities=19% Similarity=0.113 Sum_probs=73.2
Q ss_pred EEEEecccccccHHHHHHHHhhCCCcc-----EEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC-----
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVG-----KIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL----- 181 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~-----~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL----- 181 (554)
+|.|+||+|.+|+.++..|...+- +. .++++|... ..++......|+.+...-+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~---------------~~~~a~g~~~Dl~d~~~~~~~~~~ 64 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPP---------------AMKVLEGVVMELMDCAFPLLDGVV 64 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCC---------------cccccceeEeehhcccchhcCcee
Confidence 589999999999999999886332 21 466666421 0112333455555543111
Q ss_pred -CHHHHHHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 182 -EEDLADVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 182 -s~~~~~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
+.++++ .++++|+|||+|+..+- .++..++...|+.-.+++.+...++.+.+.++.+-|
T Consensus 65 ~~~~~~~-~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 65 PTHDPAV-AFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred ccCChHH-HhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 112233 45799999999998554 345778899999999999999887523444544444
No 316
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.69 E-value=0.025 Score=50.08 Aligned_cols=115 Identities=15% Similarity=0.051 Sum_probs=74.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCC--chhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGK--SYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~--~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|.|+||+|.+|++++..|+.. .-+.+++++|...- ++....-+ ........++....+|..+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~-~l~~ei~L~D~~~~-~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~------------ 66 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQ-GLADEIVLIDINED-KAEGEALDLSHASAPLPSPVRITSGDYEA------------ 66 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHT-TTSSEEEEEESSHH-HHHHHHHHHHHHHHGSTEEEEEEESSGGG------------
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCCCceEEeccCcc-cceeeehhhhhhhhhcccccccccccccc------------
Confidence 47999999999999999999886 45678998886421 11111100 0011112234444433322
Q ss_pred HhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 189 IAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 189 l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
++++|+|+-+|+..+ ..+.-.++.+.|+.-.+++.+...+. ..+.++.+-|
T Consensus 67 -~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~vivvt 118 (141)
T PF00056_consen 67 -LKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAIVIVVT 118 (141)
T ss_dssp -GTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSEEEE-S
T ss_pred -cccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccEEEEeC
Confidence 368999999998743 34567788999999999999999885 4544444443
No 317
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.57 E-value=0.0076 Score=61.74 Aligned_cols=82 Identities=13% Similarity=0.105 Sum_probs=53.3
Q ss_pred cCcEEEEecccccccHH--HHHHHHhhCCCccEEEEEc--chhHH------------HHHHHcCCchhhhccCcEEEEEc
Q 042694 109 KAKNFFVTGATGFLAKV--LIEKILRTVPDVGKIFIIN--AELFK------------CLKQTYGKSYQAFMLSKLVPAVG 172 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~--Ll~~LL~~~~~V~~i~~~~--~~~~~------------~l~~~~~~~~~~~~~~kv~~v~G 172 (554)
.+|++|||||++-+|.. +.+.| +.|.++ +++. .+..+ .+.+... ....++..+.+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~V---i~v~~~~~~~~~~~~tagwy~~~a~~~~a~-----~~G~~a~~i~~ 110 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADT---LGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-----AAGLYAKSING 110 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeE---EEEecCcchhhhcccccccchHHHHHHHHH-----hcCCceEEEEc
Confidence 46899999999999999 88888 777543 3332 21111 1111111 01234667899
Q ss_pred cCCCCCCCCCHHHHHHHhc-------CccEEEEcCCCCCc
Q 042694 173 NVCENNLGLEEDLADVIAK-------EVDVIVNSAANTTF 205 (554)
Q Consensus 173 Dl~~~~lGLs~~~~~~l~~-------~vdiViH~AA~v~~ 205 (554)
|++++ +..+.+++ ++|+++|++|..+-
T Consensus 111 DVss~------E~v~~lie~I~e~~G~IDiLVnSaA~~~r 144 (398)
T PRK13656 111 DAFSD------EIKQKVIELIKQDLGQVDLVVYSLASPRR 144 (398)
T ss_pred CCCCH------HHHHHHHHHHHHhcCCCCEEEECCccCCC
Confidence 99987 66555543 69999999997543
No 318
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.52 E-value=0.0039 Score=65.00 Aligned_cols=75 Identities=16% Similarity=0.198 Sum_probs=50.7
Q ss_pred ccCcEEEEecc----------------cccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEE
Q 042694 108 LKAKNFFVTGA----------------TGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAV 171 (554)
Q Consensus 108 ~~~~~VlITGa----------------TGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~ 171 (554)
++|++|+|||| ||.+|..+++.|.+.|.+ |+++..+. .+. . ...+ ..
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~---V~~v~~~~--~~~--~--------~~~~--~~ 248 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGAD---VTLVSGPV--NLP--T--------PAGV--KR 248 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCE---EEEeCCCc--ccc--C--------CCCc--EE
Confidence 57999999999 999999999999998864 44444321 010 0 1122 34
Q ss_pred ccCCCCCCCCCHHHHHHHh----cCccEEEEcCCCCCc
Q 042694 172 GNVCENNLGLEEDLADVIA----KEVDVIVNSAANTTF 205 (554)
Q Consensus 172 GDl~~~~lGLs~~~~~~l~----~~vdiViH~AA~v~~ 205 (554)
.|+++. +++.... .++|++||+||...|
T Consensus 249 ~dv~~~------~~~~~~v~~~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 249 IDVESA------QEMLDAVLAALPQADIFIMAAAVADY 280 (399)
T ss_pred EccCCH------HHHHHHHHHhcCCCCEEEEccccccc
Confidence 577665 3333332 479999999998665
No 319
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.43 E-value=0.014 Score=57.03 Aligned_cols=93 Identities=9% Similarity=0.150 Sum_probs=55.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||+||||. |+.|++.|.+.+++| ++.+....-...-. ......+.++..+. +++..++
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v--~~s~~t~~~~~~~~----------~~g~~~v~~g~l~~------~~l~~~l 61 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEI--LVTVTTSEGKHLYP----------IHQALTVHTGALDP------QELREFL 61 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeE--EEEEccCCcccccc----------ccCCceEEECCCCH------HHHHHHH
Confidence 57999999999 999999999877644 34443321110000 01112233333333 4454454
Q ss_pred c--CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCce
Q 042694 191 K--EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKL 235 (554)
Q Consensus 191 ~--~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~ 235 (554)
+ ++|+|||++.. |.. .-++++.++|+++ ++.-
T Consensus 62 ~~~~i~~VIDAtHP------fA~------~is~~a~~a~~~~-~ipy 95 (256)
T TIGR00715 62 KRHSIDILVDATHP------FAA------QITTNATAVCKEL-GIPY 95 (256)
T ss_pred HhcCCCEEEEcCCH------HHH------HHHHHHHHHHHHh-CCcE
Confidence 3 69999998643 222 3467888999985 5543
No 320
>PRK05691 peptide synthase; Validated
Probab=96.20 E-value=0.0018 Score=87.02 Aligned_cols=54 Identities=6% Similarity=0.046 Sum_probs=43.2
Q ss_pred CCcchhHHHHhhcccceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee-----cccccee
Q 042694 10 SVAPNKFVKAFENNCDLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLV 69 (554)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~ 69 (554)
+..+.+..+ +|++++..+.+ |||++|||||+||||.+++++.+|+.+ +++||+.
T Consensus 4240 ~~~e~~l~~------iw~~vL~~~~i~~~d~Ff~lGg~Sl~a~~l~~~~~~~~~~~~~~~~~f~~~t~~ 4302 (4334)
T PRK05691 4240 NELEQTLAT------IWADVLKVERVGVHDNFFELGGHSLLATQIASRVQKALQRNVPLRAMFECSTVE 4302 (4334)
T ss_pred CHHHHHHHH------HHHHHhCCCcCCCCCchhhcCCcHHHHHHHHHHHHHHhCCCccHHHHhcCCCHH
Confidence 334555666 89977775544 999999999999999999999999887 3777764
No 321
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=95.94 E-value=0.023 Score=56.21 Aligned_cols=75 Identities=15% Similarity=0.226 Sum_probs=51.7
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK 191 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~ 191 (554)
.++|-|||||.|+.++|+|.+.+... -+--.+....++++...+..... . ++.. ++..+.+++
T Consensus 8 d~iiYGAtGy~G~lvae~l~~~g~~~-aLAgRs~~kl~~l~~~LG~~~~~--------~--p~~~------p~~~~~~~~ 70 (382)
T COG3268 8 DIIIYGATGYAGGLVAEYLAREGLTA-ALAGRSSAKLDALRASLGPEAAV--------F--PLGV------PAALEAMAS 70 (382)
T ss_pred eEEEEccccchhHHHHHHHHHcCCch-hhccCCHHHHHHHHHhcCccccc--------c--CCCC------HHHHHHHHh
Confidence 58999999999999999999977543 11112334566666665432111 1 1222 488999999
Q ss_pred CccEEEEcCCCC
Q 042694 192 EVDVIVNSAANT 203 (554)
Q Consensus 192 ~vdiViH~AA~v 203 (554)
.+++|+||++.-
T Consensus 71 ~~~VVlncvGPy 82 (382)
T COG3268 71 RTQVVLNCVGPY 82 (382)
T ss_pred cceEEEeccccc
Confidence 999999999963
No 322
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.93 E-value=0.099 Score=53.46 Aligned_cols=112 Identities=21% Similarity=0.325 Sum_probs=72.4
Q ss_pred chhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH---------------------------HHHHHHc
Q 042694 103 GIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF---------------------------KCLKQTY 155 (554)
Q Consensus 103 ~i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~---------------------------~~l~~~~ 155 (554)
.-++-.++++|+|.|+. =+|+++++.|.+.| |+++.++|.... +++++..
T Consensus 17 ~~Q~~L~~~~VlIiG~G-glGs~va~~La~aG--vg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~in 93 (338)
T PRK12475 17 EGQRKIREKHVLIVGAG-ALGAANAEALVRAG--IGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKIN 93 (338)
T ss_pred HHHHhhcCCcEEEECCC-HHHHHHHHHHHHcC--CCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHC
Confidence 34555778899999985 49999999999875 567887764321 1111111
Q ss_pred CCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCce
Q 042694 156 GKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKL 235 (554)
Q Consensus 156 ~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~ 235 (554)
..-+++.+..|++. +..+.+.+++|+||.+... +.. -..+-++|.+. -.+
T Consensus 94 -------p~v~i~~~~~~~~~-------~~~~~~~~~~DlVid~~D~--~~~------------r~~in~~~~~~--~ip 143 (338)
T PRK12475 94 -------SEVEIVPVVTDVTV-------EELEELVKEVDLIIDATDN--FDT------------RLLINDLSQKY--NIP 143 (338)
T ss_pred -------CCcEEEEEeccCCH-------HHHHHHhcCCCEEEEcCCC--HHH------------HHHHHHHHHHc--CCC
Confidence 12356677777652 5667778999999998632 211 11244666663 357
Q ss_pred EEEEeeceeccc
Q 042694 236 FVQVSTAYVNGQ 247 (554)
Q Consensus 236 ~v~vST~~v~~~ 247 (554)
+||.+....+|.
T Consensus 144 ~i~~~~~g~~G~ 155 (338)
T PRK12475 144 WIYGGCVGSYGV 155 (338)
T ss_pred EEEEEecccEEE
Confidence 899888766654
No 323
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=95.89 E-value=0.12 Score=49.26 Aligned_cols=129 Identities=15% Similarity=0.085 Sum_probs=80.8
Q ss_pred cEEEEecccccccHHHHHHHHhhCCC-ccEEEEEcc-------hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCC-
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPD-VGKIFIINA-------ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGL- 181 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~-V~~i~~~~~-------~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGL- 181 (554)
|.++|||++.-||-.|+.+||+...+ |+--.|+.. .+-.++++-.++ ..-++.++..|++...--+
T Consensus 4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~-----~~i~~~yvlvD~sNm~Sv~~ 78 (341)
T KOG1478|consen 4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPK-----STIEVTYVLVDVSNMQSVFR 78 (341)
T ss_pred eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCC-----ceeEEEEEEEehhhHHHHHH
Confidence 56899999999999999999985433 322223322 223344444443 2457888999998751100
Q ss_pred CHHHHHHHhcCccEEEEcCCCCCch----------------------------------hhHHHHHHHhchHHHHHHHHH
Q 042694 182 EEDLADVIAKEVDVIVNSAANTTFD----------------------------------ERYDIAIDINTRGPCRLMEFA 227 (554)
Q Consensus 182 s~~~~~~l~~~vdiViH~AA~v~~~----------------------------------~~~~~~~~~Nv~gt~~ll~la 227 (554)
...++.+-....|.|+-+||...+. +...+.+++||.|..-+++-.
T Consensus 79 A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l 158 (341)
T KOG1478|consen 79 ASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIREL 158 (341)
T ss_pred HHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhh
Confidence 0022333345899999999975321 245678899999987766543
Q ss_pred HH---cCCCceEEEEeecee
Q 042694 228 KQ---CNKLKLFVQVSTAYV 244 (554)
Q Consensus 228 ~~---~~~~k~~v~vST~~v 244 (554)
.. ...-..+|.+||..+
T Consensus 159 ~pll~~~~~~~lvwtSS~~a 178 (341)
T KOG1478|consen 159 EPLLCHSDNPQLVWTSSRMA 178 (341)
T ss_pred hhHhhcCCCCeEEEEeeccc
Confidence 22 123348899998654
No 324
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=95.88 E-value=0.012 Score=54.63 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=42.6
Q ss_pred cCcEEEEecc----------------cccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEc
Q 042694 109 KAKNFFVTGA----------------TGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVG 172 (554)
Q Consensus 109 ~~~~VlITGa----------------TGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~G 172 (554)
+|++||||+| ||-+|..|.+.++++|.+| .++..+. .+. ....+..+..
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V---~li~g~~--~~~----------~p~~~~~i~v 66 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEV---TLIHGPS--SLP----------PPPGVKVIRV 66 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EE---EEEE-TT--S--------------TTEEEEE-
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEE---EEEecCc--ccc----------ccccceEEEe
Confidence 4677777754 7899999999999999765 3332221 000 1235555554
Q ss_pred cCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCch
Q 042694 173 NVCENNLGLEEDLADVIAKEVDVIVNSAANTTFD 206 (554)
Q Consensus 173 Dl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~ 206 (554)
+-.+.- .+.....+.+.|++||+||...|.
T Consensus 67 ~sa~em----~~~~~~~~~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 67 ESAEEM----LEAVKELLPSADIIIMAAAVSDFR 96 (185)
T ss_dssp SSHHHH----HHHHHHHGGGGSEEEE-SB--SEE
T ss_pred cchhhh----hhhhccccCcceeEEEecchhhee
Confidence 432211 133344446789999999998874
No 325
>PRK12467 peptide synthase; Provisional
Probab=95.79 E-value=0.0035 Score=83.64 Aligned_cols=53 Identities=9% Similarity=0.055 Sum_probs=42.6
Q ss_pred CcchhHHHHhhcccceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee-----cccccee
Q 042694 11 VAPNKFVKAFENNCDLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLV 69 (554)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~ 69 (554)
..+.+... +|++++..+.+ |||++|||||+|++|.++|++.+|+.+ ++.||+.
T Consensus 3605 ~~e~~l~~------i~~~vL~~~~i~~~d~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~ 3666 (3956)
T PRK12467 3605 EVEQQLAA------IWADVLGVEQVGVTDNFFELGGDSLLALQVLSRIRQSLGLKLSLRDLMSAPTIA 3666 (3956)
T ss_pred HHHHHHHH------HHHHHhCCCCCCCCcchhcccchHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHH
Confidence 34455565 89977765544 999999999999999999999999988 3777764
No 326
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=95.77 E-value=0.0038 Score=75.94 Aligned_cols=45 Identities=11% Similarity=0.075 Sum_probs=37.3
Q ss_pred ceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee-----cccccee
Q 042694 25 DLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLV 69 (554)
Q Consensus 25 ~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~ 69 (554)
+|++++..+.+ |||++|||||+|++|.++|++.+|+.+ ++.||+.
T Consensus 986 ~~~~~l~~~~~~~~~~ff~lGg~Sl~a~~l~~~l~~~~~~~l~~~~~~~~pti~ 1039 (1296)
T PRK10252 986 AFSSLLGCDVVDADADFFALGGHSLLAMKLAAQLSRQFARQVTPGQVMVASTVA 1039 (1296)
T ss_pred HHHHHhCCCCCCCCcCHHHcCCChHHHHHHHHHHHHHhCCCCCHHHHhcCCCHH
Confidence 79976664433 999999999999999999999999887 3667664
No 327
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.73 E-value=0.14 Score=48.21 Aligned_cols=113 Identities=14% Similarity=0.246 Sum_probs=71.5
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH---------------------------HHHHHHcC
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF---------------------------KCLKQTYG 156 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~---------------------------~~l~~~~~ 156 (554)
.++-.+..+|+|.|+.| +|..+++.|.+.| |+++.++|.... +++++..
T Consensus 13 ~q~~L~~s~VlviG~gg-lGsevak~L~~~G--Vg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lN- 88 (198)
T cd01485 13 AQNKLRSAKVLIIGAGA-LGAEIAKNLVLAG--IDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELN- 88 (198)
T ss_pred HHHHHhhCcEEEECCCH-HHHHHHHHHHHcC--CCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHC-
Confidence 34446678999999988 9999999999865 678887764321 1111111
Q ss_pred CchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceE
Q 042694 157 KSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLF 236 (554)
Q Consensus 157 ~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~ 236 (554)
..-+++.+..++... .+....+.++.|+||-+... ... ...+-++|++. + .+|
T Consensus 89 ------p~v~i~~~~~~~~~~-----~~~~~~~~~~~dvVi~~~d~------~~~--------~~~ln~~c~~~-~-ip~ 141 (198)
T cd01485 89 ------PNVKLSIVEEDSLSN-----DSNIEEYLQKFTLVIATEEN------YER--------TAKVNDVCRKH-H-IPF 141 (198)
T ss_pred ------CCCEEEEEecccccc-----hhhHHHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCE
Confidence 123566666665431 24456667889999976332 112 22355778873 4 589
Q ss_pred EEEeeceeccc
Q 042694 237 VQVSTAYVNGQ 247 (554)
Q Consensus 237 v~vST~~v~~~ 247 (554)
++.++.+.+|.
T Consensus 142 i~~~~~G~~G~ 152 (198)
T cd01485 142 ISCATYGLIGY 152 (198)
T ss_pred EEEEeecCEEE
Confidence 99988766664
No 328
>PRK05691 peptide synthase; Validated
Probab=95.67 E-value=0.004 Score=83.86 Aligned_cols=45 Identities=13% Similarity=0.010 Sum_probs=37.8
Q ss_pred ceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee-----cccccee
Q 042694 25 DLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLV 69 (554)
Q Consensus 25 ~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~ 69 (554)
+|++++..+.+ |||++|||||+|++|++++++++|+.+ ++.||+.
T Consensus 1646 iw~~vL~~~~i~~~d~Ff~lGGdSl~a~~l~~~~~~~~~~~l~~~~~f~~~tl~ 1699 (4334)
T PRK05691 1646 IWREVLGLPRVGLRDDFFALGGHSLLATQIVSRTRQACDVELPLRALFEASELG 1699 (4334)
T ss_pred HHHHHhCCCCCCCCCchHHhcccHHHHHHHHHHHHHHhCCCcchhhhhcCCcHH
Confidence 89977765544 999999999999999999999999887 3777663
No 329
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.64 E-value=0.15 Score=52.08 Aligned_cols=118 Identities=19% Similarity=0.274 Sum_probs=72.6
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHH--H-----------H-----HHHcC-Cchhhh-c
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFK--C-----------L-----KQTYG-KSYQAF-M 163 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~--~-----------l-----~~~~~-~~~~~~-~ 163 (554)
-++-.+..+|+|.|+ |.||+.+++.|.+.| |++|.++|....+ . + +.... +...+. .
T Consensus 18 ~Q~~L~~~~VlVvG~-GglGs~va~~La~aG--vg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp 94 (339)
T PRK07688 18 GQQKLREKHVLIIGA-GALGTANAEMLVRAG--VGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS 94 (339)
T ss_pred HHHHhcCCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC
Confidence 345567889999998 889999999999865 5688877643210 0 0 00000 000000 1
Q ss_pred cCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeece
Q 042694 164 LSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAY 243 (554)
Q Consensus 164 ~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~ 243 (554)
.-++..+..+++ ++....+.++.|+|+.+... + ..-..+-++|.+. + +++||.|+..
T Consensus 95 ~v~v~~~~~~~~-------~~~~~~~~~~~DlVid~~Dn--~------------~~r~~ln~~~~~~-~-iP~i~~~~~g 151 (339)
T PRK07688 95 DVRVEAIVQDVT-------AEELEELVTGVDLIIDATDN--F------------ETRFIVNDAAQKY-G-IPWIYGACVG 151 (339)
T ss_pred CcEEEEEeccCC-------HHHHHHHHcCCCEEEEcCCC--H------------HHHHHHHHHHHHh-C-CCEEEEeeee
Confidence 124556666664 35566778899999998542 2 1122355777763 3 6899999887
Q ss_pred eccc
Q 042694 244 VNGQ 247 (554)
Q Consensus 244 v~~~ 247 (554)
.+|.
T Consensus 152 ~~G~ 155 (339)
T PRK07688 152 SYGL 155 (339)
T ss_pred eeeE
Confidence 7764
No 330
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.62 E-value=0.27 Score=42.95 Aligned_cols=104 Identities=16% Similarity=0.264 Sum_probs=67.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCchhhhcc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSYQAFML 164 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~~~~~~ 164 (554)
.++|+|.|+ |-+|+.+++.|.+.| |+++.++|... .+++++.. ..
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~G--v~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n-------p~ 71 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSG--VGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN-------PD 71 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHT--TSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS-------TT
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhC--CCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc-------Cc
Confidence 468999997 669999999999976 46777665311 11222211 13
Q ss_pred CcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 165 SKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 165 ~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
-++..+..++. ++....+.+++|+||.|.... .....+.+.|++. -+++++.++...
T Consensus 72 ~~v~~~~~~~~-------~~~~~~~~~~~d~vi~~~d~~--------------~~~~~l~~~~~~~--~~p~i~~~~~g~ 128 (135)
T PF00899_consen 72 VEVEAIPEKID-------EENIEELLKDYDIVIDCVDSL--------------AARLLLNEICREY--GIPFIDAGVNGF 128 (135)
T ss_dssp SEEEEEESHCS-------HHHHHHHHHTSSEEEEESSSH--------------HHHHHHHHHHHHT--T-EEEEEEEETT
T ss_pred eeeeeeecccc-------cccccccccCCCEEEEecCCH--------------HHHHHHHHHHHHc--CCCEEEEEeecC
Confidence 46777777772 366777788999999986541 1123466777763 348888887655
Q ss_pred cc
Q 042694 245 NG 246 (554)
Q Consensus 245 ~~ 246 (554)
+|
T Consensus 129 ~G 130 (135)
T PF00899_consen 129 YG 130 (135)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 331
>PRK12467 peptide synthase; Provisional
Probab=95.49 E-value=0.0053 Score=82.07 Aligned_cols=45 Identities=13% Similarity=0.122 Sum_probs=37.4
Q ss_pred ceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee-----cccccee
Q 042694 25 DLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLV 69 (554)
Q Consensus 25 ~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~ 69 (554)
+|++++....+ |||++|||||+|++|++++++++|+.+ ++.||+.
T Consensus 1038 i~~~vL~~~~i~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~lf~~~t~~ 1091 (3956)
T PRK12467 1038 IWADVLKVERVGLTDNFFELGGHSLLATQVISRVRQRLGIQVPLRTLFEHQTLA 1091 (3956)
T ss_pred HHHHHhCCCCCCCCCCchhccCccHHHHHHHHHHHHHhCCCcchHHhhccchHH
Confidence 78877665444 999999999999999999999999887 3666653
No 332
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.45 E-value=0.1 Score=52.57 Aligned_cols=115 Identities=16% Similarity=0.066 Sum_probs=71.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhcc-CcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFML-SKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~-~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
++|.|+||||.+|+.++..|+.++ -+..++++|.. +.+...-+ ..+... .++....+| +++..-
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~-~~~elvLiDi~---~a~g~alD-L~~~~~~~~i~~~~~~----------~~~y~~ 65 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNP-LVSELALYDIV---NTPGVAAD-LSHINTPAKVTGYLGP----------EELKKA 65 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCcEEEEEecC---ccceeehH-hHhCCCcceEEEecCC----------CchHHh
Confidence 479999999999999999887644 34578888754 11111000 000000 112111111 222233
Q ss_pred hcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 190 AKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 190 ~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
++++|+|+-+||..+ ..+.-.++.+.|+.-.+++.+..++. +.+.++.+=|
T Consensus 66 ~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~vivvt 117 (310)
T cd01337 66 LKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA-CPKALILIIS 117 (310)
T ss_pred cCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence 479999999999854 34567788999999999999888875 4555544433
No 333
>PRK12316 peptide synthase; Provisional
Probab=95.38 E-value=0.006 Score=83.19 Aligned_cols=44 Identities=11% Similarity=0.032 Sum_probs=37.1
Q ss_pred ceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee-----cccccee
Q 042694 25 DLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLV 69 (554)
Q Consensus 25 ~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~ 69 (554)
+|++++..+.+ |||++|||||+|++|+++++++ |+.+ ++.||+.
T Consensus 3564 iw~~vL~~~~i~~~d~Ff~lGGdSl~a~~l~~~~~~~-g~~~~~~~~f~~~ti~ 3616 (5163)
T PRK12316 3564 IWADVLKLEQVGLTDNFFELGGDSIISLQVVSRARQA-GIRFTPKDLFQHQTIQ 3616 (5163)
T ss_pred HHHHHhCCCCCCCCCCchhcCCccHHHHHHHHHHHHc-CCCCCHHHHhcCCCHH
Confidence 89977766544 9999999999999999999988 8877 4777764
No 334
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.32 E-value=0.055 Score=54.12 Aligned_cols=84 Identities=20% Similarity=0.205 Sum_probs=52.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.++++++|||| |-+|+.++..|.+.+. ++|+++++.. .++.++.... ... ...++.....|+.+. ++
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~~~~a~~l~~~-l~~-~~~~~~~~~~d~~~~------~~ 192 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDFYERAEQTAEK-IKQ-EVPECIVNVYDLNDT------EK 192 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchHHHHHHHHHHH-Hhh-cCCCceeEEechhhh------hH
Confidence 46789999999 7799999999998764 4677765432 1333221110 000 112334456677654 56
Q ss_pred HHHHhcCccEEEEcCCC
Q 042694 186 ADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~ 202 (554)
.....+.+|+|||+-..
T Consensus 193 ~~~~~~~~DilINaTp~ 209 (289)
T PRK12548 193 LKAEIASSDILVNATLV 209 (289)
T ss_pred HHhhhccCCEEEEeCCC
Confidence 66666788999997654
No 335
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=95.31 E-value=0.11 Score=52.72 Aligned_cols=118 Identities=18% Similarity=0.111 Sum_probs=71.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCcc-----EEEEEcchh-HHHHHHHcCCchhh--hccCcEEEEEccCCCCCCCC
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVG-----KIFIINAEL-FKCLKQTYGKSYQA--FMLSKLVPAVGNVCENNLGL 181 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~-----~i~~~~~~~-~~~l~~~~~~~~~~--~~~~kv~~v~GDl~~~~lGL 181 (554)
+-+|.|+||+|++|+.++..|+..+ -+. .++++|... .+.++...-+.... .....+.+.
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~-~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~----------- 70 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGE-LFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT----------- 70 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCC-cccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-----------
Confidence 4589999999999999999998753 244 677776421 11111110000000 000111111
Q ss_pred CHHHHHHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 182 EEDLADVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 182 s~~~~~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
..+++.+ +++|+|+-+|+..+ ..++-.++...|+.-.+++.+...++...+.++.+-|
T Consensus 71 -~~~~~~~-~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 71 -TDPEEAF-KDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred -cChHHHh-CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 1334444 78999999999744 3457778999999999999998887522155555544
No 336
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=95.24 E-value=0.07 Score=53.92 Aligned_cols=109 Identities=12% Similarity=0.030 Sum_probs=65.4
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
++|.|+||||++|.+++..|+..+. ...|++++... .+.+................ ...+.. + .+++.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~-~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~---~~~i~~-----~-~d~~~- 69 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDV-VKEINLISRPKSLEKLKGLRLDIYDALAAAGI---DAEIKI-----S-SDLSD- 69 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEECcccccccccccchhhhchhccCC---CcEEEE-----C-CCHHH-
Confidence 5799999999999999999998654 33677776421 12221111100000000000 001110 1 22444
Q ss_pred hcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHc
Q 042694 190 AKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQC 230 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~ 230 (554)
++++|+||-+++...- .++..++.+.|+.-.+++++...+.
T Consensus 70 l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~ 111 (309)
T cd05294 70 VAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF 111 (309)
T ss_pred hCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999997543 3455678889999999998877664
No 337
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.14 E-value=0.026 Score=48.51 Aligned_cols=33 Identities=21% Similarity=0.514 Sum_probs=28.1
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
+|.|.||||++|+.|++.|.+ .|.+.-+.+..+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE-HPDFELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TSTEEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhc-CCCccEEEeeee
Confidence 689999999999999999988 788876666654
No 338
>PRK12316 peptide synthase; Provisional
Probab=95.08 E-value=0.0082 Score=81.93 Aligned_cols=45 Identities=11% Similarity=0.039 Sum_probs=38.0
Q ss_pred ceeeeeccccc----cccccCCchhHHHHHHHHHhhhhceee-----cccccee
Q 042694 25 DLCLLRRKRSI----MHCQGGGKTTRSSGVSSALKERSTVTD-----TAAGSLV 69 (554)
Q Consensus 25 ~~~~~~~~~~~----~Ff~~GG~Sl~a~~l~~~l~~~~~v~~-----~~~~~~~ 69 (554)
+|+++++.+.| |||++|||||+|++|+++|++++|+.+ ++.||+.
T Consensus 5080 i~~~vL~~~~i~~~~~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~ 5133 (5163)
T PRK12316 5080 IWAEVLQLERVGLDDNFFELGGHSLLAIQVTSRIQLELGLELPLRELFQTPTLA 5133 (5163)
T ss_pred HHHHHhCCCCCCCCCChhhccchHHHHHHHHHHHHHHcCCCCCHHHHHcCCCHH
Confidence 89977765544 999999999999999999999999887 3666664
No 339
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.03 E-value=0.12 Score=55.23 Aligned_cols=78 Identities=21% Similarity=0.177 Sum_probs=49.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.++++|+|+|+++ +|..+++.|++.|.+| ...+....+.+.+... .....++.++.+|..+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V---~~~d~~~~~~~~~~~~----~l~~~~~~~~~~~~~~----------- 63 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKV---ILTDEKEEDQLKEALE----ELGELGIELVLGEYPE----------- 63 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEE---EEEeCCchHHHHHHHH----HHHhcCCEEEeCCcch-----------
Confidence 3578999999988 9999999999999765 3333321112211110 0011245677777764
Q ss_pred HHhcCccEEEEcCCCCC
Q 042694 188 VIAKEVDVIVNSAANTT 204 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~ 204 (554)
....++|+||++++...
T Consensus 64 ~~~~~~d~vv~~~g~~~ 80 (450)
T PRK14106 64 EFLEGVDLVVVSPGVPL 80 (450)
T ss_pred hHhhcCCEEEECCCCCC
Confidence 23457999999988643
No 340
>PRK08223 hypothetical protein; Validated
Probab=95.01 E-value=0.3 Score=48.35 Aligned_cols=112 Identities=15% Similarity=0.164 Sum_probs=69.0
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCc
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKS 158 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~ 158 (554)
-++-.+..+|+|.|+.| +|+.+++.|.+.| |+++.++|.... +++++..
T Consensus 21 ~Q~kL~~s~VlIvG~GG-LGs~va~~LA~aG--VG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iN--- 94 (287)
T PRK08223 21 EQQRLRNSRVAIAGLGG-VGGIHLLTLARLG--IGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDIN--- 94 (287)
T ss_pred HHHHHhcCCEEEECCCH-HHHHHHHHHHHhC--CCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHC---
Confidence 34556788999999855 9999999999875 678887753221 1121111
Q ss_pred hhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEE
Q 042694 159 YQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQ 238 (554)
Q Consensus 159 ~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~ 238 (554)
..-+|+++...++. +....+.+++|+|+.+.-..++.. -..+-++|.+. -+++|+
T Consensus 95 ----P~v~V~~~~~~l~~-------~n~~~ll~~~DlVvD~~D~~~~~~------------r~~ln~~c~~~--~iP~V~ 149 (287)
T PRK08223 95 ----PELEIRAFPEGIGK-------ENADAFLDGVDVYVDGLDFFEFDA------------RRLVFAACQQR--GIPALT 149 (287)
T ss_pred ----CCCEEEEEecccCc-------cCHHHHHhCCCEEEECCCCCcHHH------------HHHHHHHHHHc--CCCEEE
Confidence 12356666666653 456677889999997643221111 12345667663 367888
Q ss_pred Eeeceecc
Q 042694 239 VSTAYVNG 246 (554)
Q Consensus 239 vST~~v~~ 246 (554)
.|.....+
T Consensus 150 ~~~~g~~g 157 (287)
T PRK08223 150 AAPLGMGT 157 (287)
T ss_pred EeccCCeE
Confidence 76654433
No 341
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=94.96 E-value=0.37 Score=45.47 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=69.1
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCc
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKS 158 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~ 158 (554)
.++..+..+|+|.|+ |-+|+.+++.|.+.| |+++.++|.... +++++..+
T Consensus 15 ~q~kl~~~~VlviG~-GglGs~ia~~La~~G--v~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-- 89 (202)
T TIGR02356 15 GQQRLLNSHVLIIGA-GGLGSPAALYLAGAG--VGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS-- 89 (202)
T ss_pred HHHHhcCCCEEEECC-CHHHHHHHHHHHHcC--CCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC--
Confidence 345567889999996 669999999999865 568887764311 11111111
Q ss_pred hhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEE
Q 042694 159 YQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQ 238 (554)
Q Consensus 159 ~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~ 238 (554)
.-++..+..++. ++....+.++.|+||-+.... +. -..+-++|.+. -+++++
T Consensus 90 -----~v~i~~~~~~i~-------~~~~~~~~~~~D~Vi~~~d~~------~~--------r~~l~~~~~~~--~ip~i~ 141 (202)
T TIGR02356 90 -----DIQVTALKERVT-------AENLELLINNVDLVLDCTDNF------AT--------RYLINDACVAL--GTPLIS 141 (202)
T ss_pred -----CCEEEEehhcCC-------HHHHHHHHhCCCEEEECCCCH------HH--------HHHHHHHHHHc--CCCEEE
Confidence 124444444442 355667778999999986431 11 12355777763 358999
Q ss_pred Eeeceeccc
Q 042694 239 VSTAYVNGQ 247 (554)
Q Consensus 239 vST~~v~~~ 247 (554)
.++...+|.
T Consensus 142 ~~~~g~~G~ 150 (202)
T TIGR02356 142 AAVVGFGGQ 150 (202)
T ss_pred EEeccCeEE
Confidence 887665554
No 342
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.95 E-value=0.3 Score=47.03 Aligned_cols=110 Identities=17% Similarity=0.165 Sum_probs=69.4
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~~ 159 (554)
++-.+..+|+|.|+ |-+|+++++.|.+.| |+++.++|.... +++++..+
T Consensus 16 q~~L~~~~VlivG~-GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 89 (228)
T cd00757 16 QEKLKNARVLVVGA-GGLGSPAAEYLAAAG--VGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP--- 89 (228)
T ss_pred HHHHhCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCC---
Confidence 44567789999996 559999999999865 678887753211 11111111
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
.-++..+..+++ .+....+.+++|+||-|.... + .-..+-++|.+. -+++++.
T Consensus 90 ----~~~i~~~~~~i~-------~~~~~~~~~~~DvVi~~~d~~------~--------~r~~l~~~~~~~--~ip~i~~ 142 (228)
T cd00757 90 ----DVEIEAYNERLD-------AENAEELIAGYDLVLDCTDNF------A--------TRYLINDACVKL--GKPLVSG 142 (228)
T ss_pred ----CCEEEEecceeC-------HHHHHHHHhCCCEEEEcCCCH------H--------HHHHHHHHHHHc--CCCEEEE
Confidence 124555555542 356677788999999986642 1 112356777763 3688988
Q ss_pred eeceeccc
Q 042694 240 STAYVNGQ 247 (554)
Q Consensus 240 ST~~v~~~ 247 (554)
++....|.
T Consensus 143 g~~g~~g~ 150 (228)
T cd00757 143 AVLGFEGQ 150 (228)
T ss_pred EeccCEEE
Confidence 87655443
No 343
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.95 E-value=0.12 Score=52.86 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=27.7
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
+++|+|.||||++|..|++.|.++++.+.++..+.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~ 35 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLA 35 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEE
Confidence 46899999999999999999988765544555553
No 344
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.94 E-value=0.32 Score=50.14 Aligned_cols=109 Identities=21% Similarity=0.097 Sum_probs=69.7
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~ 159 (554)
++-++..+|+|.|+ |-+|+.+++.|.+.| |+++.++|... .+++++..+
T Consensus 23 q~~L~~~~VlivG~-GGlGs~~a~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np--- 96 (355)
T PRK05597 23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAG--VGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP--- 96 (355)
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC---
Confidence 44567889999998 559999999999865 67888765321 122222221
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHH-HHHHHHHcCCCceEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCR-LMEFAKQCNKLKLFVQ 238 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~-ll~la~~~~~~k~~v~ 238 (554)
.-+++++...++. +....+++++|+|+.|... + .++. +-++|.+ .-++||+
T Consensus 97 ----~v~v~~~~~~i~~-------~~~~~~~~~~DvVvd~~d~--~-------------~~r~~~n~~c~~--~~ip~v~ 148 (355)
T PRK05597 97 ----DVKVTVSVRRLTW-------SNALDELRDADVILDGSDN--F-------------DTRHLASWAAAR--LGIPHVW 148 (355)
T ss_pred ----CcEEEEEEeecCH-------HHHHHHHhCCCEEEECCCC--H-------------HHHHHHHHHHHH--cCCCEEE
Confidence 2355666655543 4555677899999998754 2 1222 4456665 3468999
Q ss_pred Eeeceeccc
Q 042694 239 VSTAYVNGQ 247 (554)
Q Consensus 239 vST~~v~~~ 247 (554)
.++....|.
T Consensus 149 ~~~~g~~g~ 157 (355)
T PRK05597 149 ASILGFDAQ 157 (355)
T ss_pred EEEecCeEE
Confidence 887666554
No 345
>PRK05442 malate dehydrogenase; Provisional
Probab=94.85 E-value=0.19 Score=50.99 Aligned_cols=119 Identities=17% Similarity=0.097 Sum_probs=71.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCcc-----EEEEEcchh-HHHHHHHcCCchhh--hccCcEEEEEccCCCCCCC
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVG-----KIFIINAEL-FKCLKQTYGKSYQA--FMLSKLVPAVGNVCENNLG 180 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~-----~i~~~~~~~-~~~l~~~~~~~~~~--~~~~kv~~v~GDl~~~~lG 180 (554)
++++|.|+||+|.+|+.++..|+..+- +. .++++|... .++++...-+.... ....++.+.
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~---------- 71 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT---------- 71 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe----------
Confidence 457899999999999999999886432 33 677776421 11111100000000 001112111
Q ss_pred CCHHHHHHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 181 LEEDLADVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 181 Ls~~~~~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
.++++.+ +++|+|+-+|+..+ ..++-.++...|+.-.+++.+...++...+.++.+-|
T Consensus 72 --~~~y~~~-~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 72 --DDPNVAF-KDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred --cChHHHh-CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 1334443 79999999998643 4567788899999999999988887433344444444
No 346
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=94.80 E-value=0.052 Score=52.23 Aligned_cols=68 Identities=22% Similarity=0.372 Sum_probs=40.7
Q ss_pred EEe-cccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH---
Q 042694 114 FVT-GATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI--- 189 (554)
Q Consensus 114 lIT-GaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l--- 189 (554)
+|| .+||.+|.++++.|++.|.+| +++..+ ..+. +. . ...+|+.+. +..+.+
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~V---vlv~~~--~~l~---~~-------~---~~~~Dv~d~------~s~~~l~~~ 73 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEV---TLVTTK--RALK---PE-------P---HPNLSIREI------ETTKDLLIT 73 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEE---EEEcCh--hhcc---cc-------c---CCcceeecH------HHHHHHHHH
Confidence 445 459999999999999988755 433321 0000 00 0 123566554 333332
Q ss_pred ----hcCccEEEEcCCCCCc
Q 042694 190 ----AKEVDVIVNSAANTTF 205 (554)
Q Consensus 190 ----~~~vdiViH~AA~v~~ 205 (554)
..++|++||+||...+
T Consensus 74 v~~~~g~iDiLVnnAgv~d~ 93 (227)
T TIGR02114 74 LKELVQEHDILIHSMAVSDY 93 (227)
T ss_pred HHHHcCCCCEEEECCEeccc
Confidence 2369999999997544
No 347
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=94.76 E-value=0.21 Score=58.08 Aligned_cols=79 Identities=16% Similarity=0.231 Sum_probs=53.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCcc------------EEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCC
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVG------------KIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCE 176 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~------------~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~ 176 (554)
++++|+|.|| |++|+..++.|.+. +++. .|.+.+.. .++.++... ...++.++..|.++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~-~~~a~~la~------~~~~~~~v~lDv~D 638 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLY-LKDAKETVE------GIENAEAVQLDVSD 638 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCC-HHHHHHHHH------hcCCCceEEeecCC
Confidence 4789999997 99999999999874 4442 24433422 222222111 11256678889887
Q ss_pred CCCCCCHHHHHHHhcCccEEEEcCCC
Q 042694 177 NNLGLEEDLADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 177 ~~lGLs~~~~~~l~~~vdiViH~AA~ 202 (554)
. +++..+.+++|+|+.|...
T Consensus 639 ~------e~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 639 S------ESLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred H------HHHHHhhcCCCEEEECCCc
Confidence 7 7777777889999999876
No 348
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.76 E-value=0.19 Score=50.50 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=63.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+.+|+|.|||||-|..|++.|.. .|++. +++..+.. -..+++..+. ..|... |-+..-+.+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~-Hp~ve-~~~~ss~~~~g~~~~~~~p~------------l~g~~~---l~~~~~~~~ 64 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAG-HPDVE-LILISSRERAGKPVSDVHPN------------LRGLVD---LPFQTIDPE 64 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhc-CCCeE-EEEeechhhcCCchHHhCcc------------cccccc---cccccCChh
Confidence 56899999999999999999987 68885 66554321 1223333322 122211 111112222
Q ss_pred H-HhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecccccceeeccccCC
Q 042694 188 V-IAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQRRGKVMEKPFCM 259 (554)
Q Consensus 188 ~-l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~~~~~i~E~~~~~ 259 (554)
. ..+++|+||-+-..- ...+++..... ++.+ +|=.|+.+=.-+. .+-|+.|..
T Consensus 65 ~~~~~~~DvvFlalPhg---------------~s~~~v~~l~~-~g~~-VIDLSadfR~~d~--~~ye~~Yg~ 118 (349)
T COG0002 65 KIELDECDVVFLALPHG---------------VSAELVPELLE-AGCK-VIDLSADFRLKDP--EVYEKWYGF 118 (349)
T ss_pred hhhcccCCEEEEecCch---------------hHHHHHHHHHh-CCCe-EEECCcccccCCH--HHHHHhhCC
Confidence 2 345799999886541 11223333332 2444 8888988765542 234555543
No 349
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=94.64 E-value=0.057 Score=55.04 Aligned_cols=36 Identities=22% Similarity=0.378 Sum_probs=29.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
+.+|.|+||||++|..|++.|.++.+.+..+..+.+
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s 39 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS 39 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC
Confidence 368999999999999999999976555557776654
No 350
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=94.59 E-value=0.14 Score=52.61 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=57.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|.|.||||++|..+++.|.+ .|.++-+.++.+. .-+.+.+..+ ++.... ++.-. +.+.+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~-hP~~el~~l~~s~~sagk~~~~~~~---------~l~~~~-~~~~~-----~~~~~~ 64 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLN-HPEVEITYLVSSRESAGKPVSEVHP---------HLRGLV-DLNLE-----PIDEEE 64 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHc-CCCceEEEEeccchhcCCChHHhCc---------cccccC-Cceee-----cCCHHH
Confidence 4799999999999999999986 4676433343432 1111222111 111010 11111 112233
Q ss_pred HhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecc
Q 042694 189 IAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~ 246 (554)
+.+++|+||-|...- ...+++..+.+ .+ +++|=.|+.+=..
T Consensus 65 ~~~~~DvVf~alP~~---------------~s~~~~~~~~~-~G-~~VIDlS~~fR~~ 105 (346)
T TIGR01850 65 IAEDADVVFLALPHG---------------VSAELAPELLA-AG-VKVIDLSADFRLK 105 (346)
T ss_pred hhcCCCEEEECCCch---------------HHHHHHHHHHh-CC-CEEEeCChhhhcC
Confidence 445899999987652 24456666555 24 5788888876544
No 351
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.58 E-value=0.61 Score=45.42 Aligned_cols=109 Identities=16% Similarity=0.158 Sum_probs=68.7
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~~ 159 (554)
++..+..+|+|.|+ |-+|+.+++.|.+.| |+++.++|.... +++++..
T Consensus 27 Q~~L~~~~VliiG~-GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~ln---- 99 (245)
T PRK05690 27 QEKLKAARVLVVGL-GGLGCAASQYLAAAG--VGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARIN---- 99 (245)
T ss_pred HHHhcCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHC----
Confidence 45577889999998 779999999999865 678887753211 1111111
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
..-+++.+...+. ++....+.+++|+||.+.... + .-..+-++|.+. -+++|+.
T Consensus 100 ---p~v~i~~~~~~i~-------~~~~~~~~~~~DiVi~~~D~~------~--------~r~~ln~~~~~~--~ip~v~~ 153 (245)
T PRK05690 100 ---PHIAIETINARLD-------DDELAALIAGHDLVLDCTDNV------A--------TRNQLNRACFAA--KKPLVSG 153 (245)
T ss_pred ---CCCEEEEEeccCC-------HHHHHHHHhcCCEEEecCCCH------H--------HHHHHHHHHHHh--CCEEEEe
Confidence 1225555555443 356677788999999986431 1 112355677763 3678887
Q ss_pred eeceecc
Q 042694 240 STAYVNG 246 (554)
Q Consensus 240 ST~~v~~ 246 (554)
++....|
T Consensus 154 ~~~g~~G 160 (245)
T PRK05690 154 AAIRMEG 160 (245)
T ss_pred eeccCCc
Confidence 6654444
No 352
>PRK07411 hypothetical protein; Validated
Probab=94.55 E-value=0.39 Score=50.19 Aligned_cols=109 Identities=20% Similarity=0.136 Sum_probs=70.6
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~ 159 (554)
++-.+..+|+|.|+.| +|+.+++.|.+.| |+++.++|... .+++++..
T Consensus 33 q~~L~~~~VlivG~GG-lG~~va~~La~~G--vg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~n---- 105 (390)
T PRK07411 33 QKRLKAASVLCIGTGG-LGSPLLLYLAAAG--IGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN---- 105 (390)
T ss_pred HHHHhcCcEEEECCCH-HHHHHHHHHHHcC--CCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHC----
Confidence 4456788999999855 9999999999865 67888775322 11222211
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHH-HHHHHHHcCCCceEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCR-LMEFAKQCNKLKLFVQ 238 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~-ll~la~~~~~~k~~v~ 238 (554)
..-+|+++...++. +....+++++|+|+.|.... + ++. +-++|.+ .-+++||
T Consensus 106 ---p~v~v~~~~~~~~~-------~~~~~~~~~~D~Vvd~~d~~------~---------~r~~ln~~~~~--~~~p~v~ 158 (390)
T PRK07411 106 ---PYCQVDLYETRLSS-------ENALDILAPYDVVVDGTDNF------P---------TRYLVNDACVL--LNKPNVY 158 (390)
T ss_pred ---CCCeEEEEecccCH-------HhHHHHHhCCCEEEECCCCH------H---------HHHHHHHHHHH--cCCCEEE
Confidence 12366667666654 34456678999999986541 1 222 3356665 3468998
Q ss_pred Eeeceeccc
Q 042694 239 VSTAYVNGQ 247 (554)
Q Consensus 239 vST~~v~~~ 247 (554)
.+...-+|.
T Consensus 159 ~~~~g~~g~ 167 (390)
T PRK07411 159 GSIFRFEGQ 167 (390)
T ss_pred EEEccCEEE
Confidence 888766654
No 353
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.51 E-value=0.56 Score=45.51 Aligned_cols=109 Identities=17% Similarity=0.208 Sum_probs=67.7
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~~ 159 (554)
++-.++.+|+|.|+ |-+|+.+++.|.+.| |+++.++|.... +++++..+
T Consensus 19 q~~L~~~~VlvvG~-GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp--- 92 (240)
T TIGR02355 19 QEALKASRVLIVGL-GGLGCAASQYLAAAG--VGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINP--- 92 (240)
T ss_pred HHHHhCCcEEEECc-CHHHHHHHHHHHHcC--CCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCC---
Confidence 44567789999997 559999999999865 678887754221 11111111
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
.-+++.+...+ +++....+.++.|+||.+... + + ....+-++|.+. -++||+.
T Consensus 93 ----~v~i~~~~~~i-------~~~~~~~~~~~~DlVvd~~D~--~----~--------~r~~ln~~~~~~--~ip~v~~ 145 (240)
T TIGR02355 93 ----HIAINPINAKL-------DDAELAALIAEHDIVVDCTDN--V----E--------VRNQLNRQCFAA--KVPLVSG 145 (240)
T ss_pred ----CcEEEEEeccC-------CHHHHHHHhhcCCEEEEcCCC--H----H--------HHHHHHHHHHHc--CCCEEEE
Confidence 12444444333 335667778899999998654 1 1 122345777763 4678887
Q ss_pred eeceecc
Q 042694 240 STAYVNG 246 (554)
Q Consensus 240 ST~~v~~ 246 (554)
++....|
T Consensus 146 ~~~g~~G 152 (240)
T TIGR02355 146 AAIRMEG 152 (240)
T ss_pred EecccEe
Confidence 7655444
No 354
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=94.47 E-value=0.46 Score=44.89 Aligned_cols=110 Identities=18% Similarity=0.206 Sum_probs=70.1
Q ss_pred hccCcEEEEecccc--cccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATG--FLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTG--FlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+.+||++||+|-.- -|+-.+.+.|.++|-++ -.-........|+++..+. ...-.++++|++++ +
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL-~fTy~~e~l~krv~~la~~------~~s~~v~~cDV~~d------~ 69 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAEL-AFTYQGERLEKRVEELAEE------LGSDLVLPCDVTND------E 69 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEE-EEEeccHHHHHHHHHHHhh------ccCCeEEecCCCCH------H
Confidence 46799999999643 58889999999988765 2222334445555554332 11134689999987 7
Q ss_pred HHHHHhc-------CccEEEEcCCCCCc-----------hhhHHHHHHHhchHHHHHHHHHHH
Q 042694 185 LADVIAK-------EVDVIVNSAANTTF-----------DERYDIAIDINTRGPCRLMEFAKQ 229 (554)
Q Consensus 185 ~~~~l~~-------~vdiViH~AA~v~~-----------~~~~~~~~~~Nv~gt~~ll~la~~ 229 (554)
..+.+++ +.|.++|+-|...- .+.+..+.++-+-+-..+.+.|+.
T Consensus 70 ~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~ 132 (259)
T COG0623 70 SIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARP 132 (259)
T ss_pred HHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHH
Confidence 7776664 78999999987652 123444444444454455555544
No 355
>PRK08328 hypothetical protein; Provisional
Probab=94.37 E-value=0.61 Score=44.98 Aligned_cols=118 Identities=26% Similarity=0.285 Sum_probs=69.7
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHH--HHHHH-------cCCc---------hhh-hcc
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFK--CLKQT-------YGKS---------YQA-FML 164 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~--~l~~~-------~~~~---------~~~-~~~ 164 (554)
.++-.++.+|+|.|+ |-+|+.+++.|.+.| |++++++|....+ .+-+. .+.. ... ...
T Consensus 21 ~q~~L~~~~VlIiG~-GGlGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~ 97 (231)
T PRK08328 21 GQEKLKKAKVAVVGV-GGLGSPVAYYLAAAG--VGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSD 97 (231)
T ss_pred HHHHHhCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCC
Confidence 345567889999997 459999999999865 6788887642211 01000 0000 000 011
Q ss_pred CcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 165 SKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 165 ~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
-++..+.+.++ ++....+.++.|+||.|... +.. -..+-++|.+. -.++|+.++.+.
T Consensus 98 v~v~~~~~~~~-------~~~~~~~l~~~D~Vid~~d~--~~~------------r~~l~~~~~~~--~ip~i~g~~~g~ 154 (231)
T PRK08328 98 IKIETFVGRLS-------EENIDEVLKGVDVIVDCLDN--FET------------RYLLDDYAHKK--GIPLVHGAVEGT 154 (231)
T ss_pred CEEEEEeccCC-------HHHHHHHHhcCCEEEECCCC--HHH------------HHHHHHHHHHc--CCCEEEEeeccC
Confidence 24555555443 35566778899999998654 111 11234566663 367898888766
Q ss_pred ccc
Q 042694 245 NGQ 247 (554)
Q Consensus 245 ~~~ 247 (554)
+|.
T Consensus 155 ~G~ 157 (231)
T PRK08328 155 YGQ 157 (231)
T ss_pred EEE
Confidence 664
No 356
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=94.25 E-value=0.15 Score=52.51 Aligned_cols=32 Identities=16% Similarity=0.290 Sum_probs=26.5
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII 143 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~ 143 (554)
+.+|.|+||||++|+.|++.|++ .+.+ ++..+
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~-~p~~-el~~~ 34 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLAN-HPWF-EVTAL 34 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHc-CCCc-eEEEE
Confidence 36899999999999999999886 5666 66655
No 357
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=94.21 E-value=0.076 Score=55.24 Aligned_cols=75 Identities=20% Similarity=0.281 Sum_probs=50.1
Q ss_pred ccCcEEEEecc----------------cccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEE
Q 042694 108 LKAKNFFVTGA----------------TGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAV 171 (554)
Q Consensus 108 ~~~~~VlITGa----------------TGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~ 171 (554)
++|++|+|||| ||.+|..+.+.|...|.+| +++..+.-. .. ...+ ..
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V---~~~~g~~~~----~~--------~~~~--~~ 245 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADV---TLITGPVSL----LT--------PPGV--KS 245 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEE---EEeCCCCcc----CC--------CCCc--EE
Confidence 67899999998 5789999999999988754 443322100 01 1122 34
Q ss_pred ccCCCCCCCCCHHHH-HHHh----cCccEEEEcCCCCCc
Q 042694 172 GNVCENNLGLEEDLA-DVIA----KEVDVIVNSAANTTF 205 (554)
Q Consensus 172 GDl~~~~lGLs~~~~-~~l~----~~vdiViH~AA~v~~ 205 (554)
.|+... +++ +.+. .++|++||+||...|
T Consensus 246 ~~v~~~------~~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 246 IKVSTA------EEMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred EEeccH------HHHHHHHHHhhcccCCEEEEccccccc
Confidence 576655 444 4343 478999999998766
No 358
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.21 E-value=0.64 Score=43.64 Aligned_cols=110 Identities=15% Similarity=0.229 Sum_probs=68.4
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCc
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKS 158 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~ 158 (554)
-++-.+..+|+|.|+.| +|.++++.|...| |+++.++|.... +++++..+
T Consensus 15 ~Q~~L~~s~VlIiG~gg-lG~evak~La~~G--Vg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp-- 89 (197)
T cd01492 15 AQKRLRSARILLIGLKG-LGAEIAKNLVLSG--IGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNP-- 89 (197)
T ss_pred HHHHHHhCcEEEEcCCH-HHHHHHHHHHHcC--CCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCC--
Confidence 34456778999999888 9999999999865 678887764321 11222221
Q ss_pred hhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEE
Q 042694 159 YQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQ 238 (554)
Q Consensus 159 ~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~ 238 (554)
.-+++++...+.+ ....+.+++|+|+-+... .+. -..+-++|++. + .+|++
T Consensus 90 -----~v~i~~~~~~~~~--------~~~~~~~~~dvVi~~~~~------~~~--------~~~ln~~c~~~-~-ip~i~ 140 (197)
T cd01492 90 -----RVKVSVDTDDISE--------KPEEFFSQFDVVVATELS------RAE--------LVKINELCRKL-G-VKFYA 140 (197)
T ss_pred -----CCEEEEEecCccc--------cHHHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEE
Confidence 1255555554442 123456789999977432 112 12344777763 4 47888
Q ss_pred Eeeceeccc
Q 042694 239 VSTAYVNGQ 247 (554)
Q Consensus 239 vST~~v~~~ 247 (554)
.++.+.+|.
T Consensus 141 ~~~~G~~G~ 149 (197)
T cd01492 141 TGVHGLFGF 149 (197)
T ss_pred EEecCCEEE
Confidence 888766654
No 359
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=94.16 E-value=0.52 Score=49.36 Aligned_cols=109 Identities=20% Similarity=0.139 Sum_probs=69.4
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~~ 159 (554)
++-.+..+|+|.|+. -+|+.++..|.+.| |+++.++|.... +++++..
T Consensus 37 q~~L~~~~VlviG~G-GlGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n---- 109 (392)
T PRK07878 37 QKRLKNARVLVIGAG-GLGSPTLLYLAAAG--VGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEIN---- 109 (392)
T ss_pred HHHHhcCCEEEECCC-HHHHHHHHHHHHcC--CCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhC----
Confidence 444677899999975 59999999999865 568887753211 1111111
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHH-HHHHHHHcCCCceEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCR-LMEFAKQCNKLKLFVQ 238 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~-ll~la~~~~~~k~~v~ 238 (554)
..-+|.++...+.. +....+++++|+|+.|... + .++. +-++|.+. -++||+
T Consensus 110 ---p~v~i~~~~~~i~~-------~~~~~~~~~~D~Vvd~~d~--~-------------~~r~~ln~~~~~~--~~p~v~ 162 (392)
T PRK07878 110 ---PLVNVRLHEFRLDP-------SNAVELFSQYDLILDGTDN--F-------------ATRYLVNDAAVLA--GKPYVW 162 (392)
T ss_pred ---CCcEEEEEeccCCh-------hHHHHHHhcCCEEEECCCC--H-------------HHHHHHHHHHHHc--CCCEEE
Confidence 11345556665543 4456677899999988643 1 1222 45667763 367999
Q ss_pred Eeeceeccc
Q 042694 239 VSTAYVNGQ 247 (554)
Q Consensus 239 vST~~v~~~ 247 (554)
.++...+|.
T Consensus 163 ~~~~g~~G~ 171 (392)
T PRK07878 163 GSIYRFEGQ 171 (392)
T ss_pred EEeccCEEE
Confidence 888777664
No 360
>PRK06060 acyl-CoA synthetase; Validated
Probab=93.93 E-value=0.031 Score=63.45 Aligned_cols=27 Identities=7% Similarity=-0.013 Sum_probs=26.4
Q ss_pred cccccCCchhHHHHHHHHHhhhhceee
Q 042694 36 MHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 36 ~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+||++|||||+|++|.++|++.+|+.+
T Consensus 571 ~f~~lG~dSl~av~l~~~l~~~~g~~l 597 (705)
T PRK06060 571 AFSELGFDSQMTVTLCKRLAAVTGLRL 597 (705)
T ss_pred ChhhcCchHHHHHHHHHHHHHHhCCCC
Confidence 899999999999999999999999988
No 361
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=93.90 E-value=0.096 Score=54.38 Aligned_cols=104 Identities=13% Similarity=0.200 Sum_probs=60.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH--HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF--KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~--~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
-..++|.|.||||++|..|++.|++. |.+ +|..+.+... +.+.... .....+|..+. .. -+
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~h-P~~-el~~l~s~~saG~~i~~~~-----------~~l~~~~~~~~-~~---~~ 98 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANH-PDF-EITVMTADRKAGQSFGSVF-----------PHLITQDLPNL-VA---VK 98 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhC-CCC-eEEEEEChhhcCCCchhhC-----------ccccCccccce-ec---CC
Confidence 35579999999999999999988875 665 5555543210 0111111 11122443211 00 11
Q ss_pred HHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccc
Q 042694 186 ADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~ 247 (554)
...+ +++|+||-+.+.- .+.+++.... .+ .++|-.|+.+-..+
T Consensus 99 ~~~~-~~~DvVf~Alp~~---------------~s~~i~~~~~--~g-~~VIDlSs~fRl~~ 141 (381)
T PLN02968 99 DADF-SDVDAVFCCLPHG---------------TTQEIIKALP--KD-LKIVDLSADFRLRD 141 (381)
T ss_pred HHHh-cCCCEEEEcCCHH---------------HHHHHHHHHh--CC-CEEEEcCchhccCC
Confidence 1223 6899999976541 3455665543 23 58999999887654
No 362
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.85 E-value=0.75 Score=47.92 Aligned_cols=110 Identities=20% Similarity=0.186 Sum_probs=67.9
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~~ 159 (554)
++-.++++|+|.|+ |-+|+.++..|.+.| |+++.++|.... +++++..+
T Consensus 130 q~~l~~~~VlvvG~-GG~Gs~ia~~La~~G--vg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 203 (376)
T PRK08762 130 QRRLLEARVLLIGA-GGLGSPAALYLAAAG--VGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP--- 203 (376)
T ss_pred HHHHhcCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC---
Confidence 34467889999987 559999999999875 568887764311 11111111
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
.-++..+...+. ++....+.+++|+||.+..... . -..+-++|.+. -+++|+.
T Consensus 204 ----~v~v~~~~~~~~-------~~~~~~~~~~~D~Vv~~~d~~~------~--------r~~ln~~~~~~--~ip~i~~ 256 (376)
T PRK08762 204 ----DVQVEAVQERVT-------SDNVEALLQDVDVVVDGADNFP------T--------RYLLNDACVKL--GKPLVYG 256 (376)
T ss_pred ----CCEEEEEeccCC-------hHHHHHHHhCCCEEEECCCCHH------H--------HHHHHHHHHHc--CCCEEEE
Confidence 123444444433 3456677789999999875421 1 11255677763 4688998
Q ss_pred eeceeccc
Q 042694 240 STAYVNGQ 247 (554)
Q Consensus 240 ST~~v~~~ 247 (554)
++....|.
T Consensus 257 ~~~g~~g~ 264 (376)
T PRK08762 257 AVFRFEGQ 264 (376)
T ss_pred EeccCEEE
Confidence 87655443
No 363
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=93.75 E-value=0.97 Score=42.93 Aligned_cols=118 Identities=19% Similarity=0.228 Sum_probs=67.3
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHH--HHH------HHcCC--------chhh-hccCc
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFK--CLK------QTYGK--------SYQA-FMLSK 166 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~--~l~------~~~~~--------~~~~-~~~~k 166 (554)
.++-.+..+|+|.|+ |-+|+.+++.|.+.| |.++.++|....+ .+. +..+. .... ...-+
T Consensus 22 ~q~~L~~~~V~ViG~-GglGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~ 98 (212)
T PRK08644 22 LLEKLKKAKVGIAGA-GGLGSNIAVALARSG--VGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVE 98 (212)
T ss_pred HHHHHhCCCEEEECc-CHHHHHHHHHHHHcC--CCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCE
Confidence 445577889999997 669999999999865 5678877543110 000 00000 0000 01135
Q ss_pred EEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecc
Q 042694 167 LVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 167 v~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~ 246 (554)
++.+...++ ++....+++++|+||.|.-. + .....+.+.|.+.. -+++++.|...-++
T Consensus 99 v~~~~~~i~-------~~~~~~~~~~~DvVI~a~D~--~------------~~r~~l~~~~~~~~-~~p~I~~~~~~~~~ 156 (212)
T PRK08644 99 IEAHNEKID-------EDNIEELFKDCDIVVEAFDN--A------------ETKAMLVETVLEHP-GKKLVAASGMAGYG 156 (212)
T ss_pred EEEEeeecC-------HHHHHHHHcCCCEEEECCCC--H------------HHHHHHHHHHHHhC-CCCEEEeehhhccC
Confidence 555555544 34556677899999998422 1 11234566776631 35788876543333
No 364
>PRK07877 hypothetical protein; Provisional
Probab=93.70 E-value=0.55 Score=52.71 Aligned_cols=112 Identities=13% Similarity=0.106 Sum_probs=67.5
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-----HHHHH---HHcCCc--------hhh-hccCc
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-----FKCLK---QTYGKS--------YQA-FMLSK 166 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-----~~~l~---~~~~~~--------~~~-~~~~k 166 (554)
-++-.+..+|+|.|+ | +|+++++.|.+.|- |+++.++|... ..|.. ...+.. ... ...-+
T Consensus 101 ~Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGv-vG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~ 177 (722)
T PRK07877 101 EQERLGRLRIGVVGL-S-VGHAIAHTLAAEGL-CGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLP 177 (722)
T ss_pred HHHHHhcCCEEEEEe-c-HHHHHHHHHHHccC-CCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCE
Confidence 355577889999999 8 99999999998752 36788765321 11110 000000 000 01235
Q ss_pred EEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHH-HHHHHHcCCCceEEEEeec
Q 042694 167 LVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRL-MEFAKQCNKLKLFVQVSTA 242 (554)
Q Consensus 167 v~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~l-l~la~~~~~~k~~v~vST~ 242 (554)
|+++...++ ++..+.+++++|+|+.|.-. | .++.+ -+.|.+ .-+++|+-|+.
T Consensus 178 v~~~~~~i~-------~~n~~~~l~~~DlVvD~~D~--~-------------~~R~~ln~~a~~--~~iP~i~~~~~ 230 (722)
T PRK07877 178 VEVFTDGLT-------EDNVDAFLDGLDVVVEECDS--L-------------DVKVLLREAARA--RRIPVLMATSD 230 (722)
T ss_pred EEEEeccCC-------HHHHHHHhcCCCEEEECCCC--H-------------HHHHHHHHHHHH--cCCCEEEEcCC
Confidence 556665554 47788888999999998643 2 13334 455665 34578877753
No 365
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=93.59 E-value=0.61 Score=47.25 Aligned_cols=115 Identities=12% Similarity=0.074 Sum_probs=71.7
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++|.|+|| |.+|+.++..|+..+ -+..++++|. +..+........-. . ...++....+| +
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~-~~~el~L~D~~~~~~~g~~~Dl~~~~-~-~~~~~~i~~~~------------~ 68 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQG-IADELVIIDINKEKAEGDAMDLSHAV-P-FTSPTKIYAGD------------Y 68 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCCchhHHHHHHHHhhc-c-ccCCeEEEeCC------------H
Confidence 4679999998 999999999888754 3457888874 21111111111000 0 11233333222 3
Q ss_pred HHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 187 DVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
+. ++++|+||-+|+..+ ..++..++...|..-.+++++..++. +.+.++.+=|
T Consensus 69 ~~-~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~-~~~~~vivvs 122 (315)
T PRK00066 69 SD-CKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS-GFDGIFLVAS 122 (315)
T ss_pred HH-hCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence 33 479999999998743 34566788999999999988888774 4444444433
No 366
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.47 E-value=0.9 Score=47.08 Aligned_cols=110 Identities=17% Similarity=0.187 Sum_probs=68.8
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~~ 159 (554)
++-.+..+|+|.|+ |-+|+.++..|.+.| |+++.++|.... +++++..
T Consensus 36 q~~l~~~~VliiG~-GglG~~v~~~La~~G--vg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~n---- 108 (370)
T PRK05600 36 QERLHNARVLVIGA-GGLGCPAMQSLASAG--VGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQ---- 108 (370)
T ss_pred HHHhcCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHC----
Confidence 44567889999997 559999999999865 568887653211 1111111
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
..-+++.+...++ ++....+++++|+||.|... +. .-..+-++|.+. -+++|+.
T Consensus 109 ---p~v~i~~~~~~i~-------~~~~~~~~~~~DlVid~~Dn--~~------------~r~~in~~~~~~--~iP~v~~ 162 (370)
T PRK05600 109 ---PDIRVNALRERLT-------AENAVELLNGVDLVLDGSDS--FA------------TKFLVADAAEIT--GTPLVWG 162 (370)
T ss_pred ---CCCeeEEeeeecC-------HHHHHHHHhCCCEEEECCCC--HH------------HHHHHHHHHHHc--CCCEEEE
Confidence 1124556655554 35566778899999998654 21 111344566653 3578888
Q ss_pred eeceeccc
Q 042694 240 STAYVNGQ 247 (554)
Q Consensus 240 ST~~v~~~ 247 (554)
+...-+|.
T Consensus 163 ~~~g~~G~ 170 (370)
T PRK05600 163 TVLRFHGE 170 (370)
T ss_pred EEecCEEE
Confidence 87655553
No 367
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=93.40 E-value=1 Score=43.37 Aligned_cols=37 Identities=27% Similarity=0.354 Sum_probs=29.7
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
+-++..+|+|.|+ |-+|+++++.|.+.| |.++.++|.
T Consensus 7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~G--Vg~i~LvD~ 43 (231)
T cd00755 7 EKLRNAHVAVVGL-GGVGSWAAEALARSG--VGKLTLIDF 43 (231)
T ss_pred HHHhCCCEEEECC-CHHHHHHHHHHHHcC--CCEEEEECC
Confidence 3456789999997 559999999999865 678887764
No 368
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=93.32 E-value=0.62 Score=49.18 Aligned_cols=121 Identities=16% Similarity=0.110 Sum_probs=72.7
Q ss_pred hccCcEEEEecccccccHHHHHHHHhh---C---CCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCC
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRT---V---PDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENN 178 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~---~---~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~ 178 (554)
+.+.-+|.|+||+|.+|.+++..|+.. + .-+.++++++.. ..+...-........ ...++.+..+|
T Consensus 97 ~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~-~~~~v~i~~~~----- 170 (444)
T PLN00112 97 WKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYP-LLREVSIGIDP----- 170 (444)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhh-hcCceEEecCC-----
Confidence 344568999999999999999999864 1 223367776531 111111111000001 11233322222
Q ss_pred CCCCHHHHHHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 179 LGLEEDLADVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 179 lGLs~~~~~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
++. ++++|+||-.||..+ ..+.-.++.+.|+.-.+++.+...+..+...++.+-|
T Consensus 171 -------ye~-~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs 226 (444)
T PLN00112 171 -------YEV-FQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG 226 (444)
T ss_pred -------HHH-hCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence 222 479999999999754 3456778899999999999998887323444444444
No 369
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=93.06 E-value=0.59 Score=47.16 Aligned_cols=114 Identities=16% Similarity=0.055 Sum_probs=69.6
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhcc-CcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFML-SKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~-~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
+|.|+||+|.+|+.++..|+..+ -+..+.++|... ..... .+..+... .++....+| +++...+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~-~~~elvL~Di~~---a~g~a-~DL~~~~~~~~i~~~~~~----------~~~~~~~ 65 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQP-YVSELSLYDIAG---AAGVA-ADLSHIPTAASVKGFSGE----------EGLENAL 65 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCC-CCcEEEEecCCC---CcEEE-chhhcCCcCceEEEecCC----------CchHHHc
Confidence 58999999999999999887653 445788877432 00000 00000000 011110111 1223345
Q ss_pred cCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 191 KEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 191 ~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
+++|+|+-+|+..+ ....-.++...|+.=.+++.+...+. ..+.++.+=|
T Consensus 66 ~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~-~p~~iiivvs 116 (312)
T TIGR01772 66 KGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-CPKAMILVIT 116 (312)
T ss_pred CCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh-CCCeEEEEec
Confidence 89999999999754 34567788999999999999888775 4555554444
No 370
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=92.71 E-value=1 Score=45.37 Aligned_cols=104 Identities=20% Similarity=0.244 Sum_probs=66.3
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCchhhhccCc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKSYQAFMLSK 166 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~~~~~~~~k 166 (554)
+|||.|+ |-+|..+++.|...| |++|.++|.... +++++.. ..-+
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~G--vg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lN-------p~v~ 70 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTG--FGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFN-------PNVK 70 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhc--CCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHC-------CCCe
Confidence 5899997 669999999999876 578887753211 1111111 1236
Q ss_pred EEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecc
Q 042694 167 LVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 167 v~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~ 246 (554)
+..+.+++.+. ..-....++.|+|+.+.... ..-..+-++|... -++|+...|.+..|
T Consensus 71 V~~~~~~i~~~------~~~~~f~~~~DvVv~a~Dn~--------------~ar~~in~~c~~~--~ip~I~~gt~G~~G 128 (312)
T cd01489 71 IVAYHANIKDP------DFNVEFFKQFDLVFNALDNL--------------AARRHVNKMCLAA--DVPLIESGTTGFLG 128 (312)
T ss_pred EEEEeccCCCc------cchHHHHhcCCEEEECCCCH--------------HHHHHHHHHHHHC--CCCEEEEecCccee
Confidence 67777777754 22234567899999875431 1223455777763 46889888877766
Q ss_pred c
Q 042694 247 Q 247 (554)
Q Consensus 247 ~ 247 (554)
.
T Consensus 129 ~ 129 (312)
T cd01489 129 Q 129 (312)
T ss_pred E
Confidence 5
No 371
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=92.62 E-value=0.84 Score=47.37 Aligned_cols=119 Identities=16% Similarity=0.099 Sum_probs=70.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCcc-----EEEEEcch-hHHHHHHHcCCchhh--hccCcEEEEEccCCCCCCC
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVG-----KIFIINAE-LFKCLKQTYGKSYQA--FMLSKLVPAVGNVCENNLG 180 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~-----~i~~~~~~-~~~~l~~~~~~~~~~--~~~~kv~~v~GDl~~~~lG 180 (554)
+.-+|.|+||+|.+|.+++..|+..+- +. .+++++.+ ..++++...-+.... ....++.+..+|
T Consensus 43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l-~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~------- 114 (387)
T TIGR01757 43 KTVNVAVSGAAGMISNHLLFMLASGEV-FGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDP------- 114 (387)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCC-------
Confidence 346899999999999999999986432 22 34344211 111111111000000 011233322222
Q ss_pred CCHHHHHHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 181 LEEDLADVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 181 Ls~~~~~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
++. ++++|+||-+|+..+ ..+.-.++...|+.-.+++.+...++.+...++.+-|
T Consensus 115 -----y~~-~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs 170 (387)
T TIGR01757 115 -----YEV-FEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG 170 (387)
T ss_pred -----HHH-hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 222 479999999999754 3456778899999999999999888544555444444
No 372
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=92.37 E-value=0.28 Score=49.57 Aligned_cols=32 Identities=13% Similarity=0.310 Sum_probs=25.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
++|.|.| +|++|..+...|++.|++| .+|-.+
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V-~v~d~~ 34 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEV-RLWDAD 34 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCee-EEEeCC
Confidence 5799999 7999999999999988765 444333
No 373
>PRK07081 acyl carrier protein; Provisional
Probab=92.17 E-value=0.12 Score=41.17 Aligned_cols=30 Identities=7% Similarity=0.011 Sum_probs=28.0
Q ss_pred ccccccccCCchhHHHHHHHHHhhhhceee
Q 042694 33 RSIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 33 ~~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+.+|+++|-|||.++.|...|.++||+.+
T Consensus 24 ~d~~l~dlGlDSl~~v~li~~lE~~f~I~i 53 (83)
T PRK07081 24 DDADLYEAGLSSLATVQLMLAIEDAFDIEI 53 (83)
T ss_pred CCCCHhhcCCCHHHHHHHHHHHHHHhCCcC
Confidence 345899999999999999999999999999
No 374
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.14 E-value=0.38 Score=51.38 Aligned_cols=71 Identities=23% Similarity=0.349 Sum_probs=50.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcc--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
|+|+|.|+ |.+|+.+++.|.+.+.+| ++++. ...+.+++ ...+..+.||.+++ +.+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v---~vid~~~~~~~~~~~----------~~~~~~~~gd~~~~------~~l~~ 60 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDV---TVIDTDEERLRRLQD----------RLDVRTVVGNGSSP------DVLRE 60 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcE---EEEECCHHHHHHHHh----------hcCEEEEEeCCCCH------HHHHH
Confidence 47999997 999999999999877654 44443 22222221 12467889998876 77776
Q ss_pred H-hcCccEEEEcCC
Q 042694 189 I-AKEVDVIVNSAA 201 (554)
Q Consensus 189 l-~~~vdiViH~AA 201 (554)
+ .+++|+|+-+..
T Consensus 61 ~~~~~a~~vi~~~~ 74 (453)
T PRK09496 61 AGAEDADLLIAVTD 74 (453)
T ss_pred cCCCcCCEEEEecC
Confidence 6 678998887654
No 375
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=92.07 E-value=2.3 Score=39.02 Aligned_cols=110 Identities=19% Similarity=0.178 Sum_probs=61.3
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH--HHHH------HHcCC--------chhh-hccCcEEEEEccC
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF--KCLK------QTYGK--------SYQA-FMLSKLVPAVGNV 174 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~--~~l~------~~~~~--------~~~~-~~~~kv~~v~GDl 174 (554)
+|+|.|+ |-+|+.+++.|.+.| |+++.++|.... ..+. +..+. .... ...-+++.+...+
T Consensus 1 ~VlViG~-GglGs~ia~~La~~G--vg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~ 77 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSG--VGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI 77 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcC--CCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec
Confidence 4899996 669999999999865 567887754321 0000 00000 0000 0123555555554
Q ss_pred CCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecc
Q 042694 175 CENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 175 ~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~ 246 (554)
. ++....+++++|+||.+... +. .-..+.+.|.+. .-.+|++-+..+-++
T Consensus 78 ~-------~~~~~~~l~~~DlVi~~~d~--~~------------~r~~i~~~~~~~-~~ip~i~~~~~~~~~ 127 (174)
T cd01487 78 D-------ENNLEGLFGDCDIVVEAFDN--AE------------TKAMLAESLLGN-KNKPVVCASGMAGFG 127 (174)
T ss_pred C-------hhhHHHHhcCCCEEEECCCC--HH------------HHHHHHHHHHHH-CCCCEEEEehhhccC
Confidence 3 34566777899999998433 21 112356666653 235777765444333
No 376
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=92.06 E-value=0.32 Score=49.78 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=26.3
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
+|+|.||||++|..|++.|.++++.+.++..+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~a 33 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLA 33 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEe
Confidence 489999999999999999887666555665543
No 377
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=91.99 E-value=0.61 Score=47.91 Aligned_cols=34 Identities=21% Similarity=0.389 Sum_probs=26.0
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
+++|+|.||||++|+.+++.|.+ .+.++-+.+.+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~-~p~~elv~v~~ 35 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLN-HPEVEIVAVTS 35 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHc-CCCceEEEEEC
Confidence 46899999999999999999986 45663333333
No 378
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.95 E-value=0.92 Score=47.92 Aligned_cols=118 Identities=14% Similarity=0.039 Sum_probs=72.3
Q ss_pred cCcEEEEecccccccHHHHHHHHhh---CC--CccEEEEEcch-hHHHHHHHcCCc---hhhhccCcEEEEEccCCCCCC
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRT---VP--DVGKIFIINAE-LFKCLKQTYGKS---YQAFMLSKLVPAVGNVCENNL 179 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~---~~--~V~~i~~~~~~-~~~~l~~~~~~~---~~~~~~~kv~~v~GDl~~~~l 179 (554)
+.-+|+||||+|.+|.+|+-.+.+- |+ .| .+++++.+ ..+.++...-+. ... ....+.+..+|
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v-~L~LlDi~~~~~~l~G~amDL~D~a~p-ll~~v~i~~~~------ 193 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEI-SIHLLDSPENLEKLKGLVMEVEDLAFP-LLRGISVTTDL------ 193 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeE-EEEEEcCCCchhhHHHHHHHHHHhHHh-hcCCcEEEECC------
Confidence 3458999999999999999999761 22 23 45566642 223332221110 001 12233333222
Q ss_pred CCCHHHHHHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCC-CceEEEEee
Q 042694 180 GLEEDLADVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNK-LKLFVQVST 241 (554)
Q Consensus 180 GLs~~~~~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~-~k~~v~vST 241 (554)
+ .-++++|+||-+|+..+- .+.-.++.+.|+.-.+.+.+...+... -.+++-+-|
T Consensus 194 ------~-ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 194 ------D-VAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred ------H-HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 2 235799999999997543 456778899999999999988877533 144554544
No 379
>PRK14851 hypothetical protein; Provisional
Probab=91.83 E-value=1.9 Score=48.25 Aligned_cols=115 Identities=17% Similarity=0.264 Sum_probs=67.6
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHH--HHHHc-------CCc--------hhh-hccC
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKC--LKQTY-------GKS--------YQA-FMLS 165 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~--l~~~~-------~~~--------~~~-~~~~ 165 (554)
.++-.++.+|+|.|+ |-+|+.+++.|.+.| |+++.++|...++. +.++. +.. ..+ ...-
T Consensus 37 ~Q~kL~~~~VlIvG~-GGlGs~va~~Lar~G--VG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~ 113 (679)
T PRK14851 37 EQERLAEAKVAIPGM-GGVGGVHLITMVRTG--IGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFL 113 (679)
T ss_pred HHHHHhcCeEEEECc-CHHHHHHHHHHHHhC--CCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCC
Confidence 455577899999996 559999999999975 57888765321110 00000 000 000 0123
Q ss_pred cEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeec
Q 042694 166 KLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTA 242 (554)
Q Consensus 166 kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~ 242 (554)
+|+++...++ ++....+++++|+||.+.-...+.. -..+.+.|.+. + .++|+.+..
T Consensus 114 ~I~~~~~~i~-------~~n~~~~l~~~DvVid~~D~~~~~~------------r~~l~~~c~~~-~-iP~i~~g~~ 169 (679)
T PRK14851 114 EITPFPAGIN-------ADNMDAFLDGVDVVLDGLDFFQFEI------------RRTLFNMAREK-G-IPVITAGPL 169 (679)
T ss_pred eEEEEecCCC-------hHHHHHHHhCCCEEEECCCCCcHHH------------HHHHHHHHHHC-C-CCEEEeecc
Confidence 5666666554 3667788899999998754322211 12356677763 4 467776543
No 380
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=91.80 E-value=0.39 Score=42.04 Aligned_cols=77 Identities=21% Similarity=0.261 Sum_probs=50.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
+++++|+|.|| |-.|+.++..|...+ +++|+++++.. .+.+.+..+ ...+.++.. ++
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g--~~~i~i~nRt~~ra~~l~~~~~-------~~~~~~~~~-----------~~ 68 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALG--AKEITIVNRTPERAEALAEEFG-------GVNIEAIPL-----------ED 68 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTT--SSEEEEEESSHHHHHHHHHHHT-------GCSEEEEEG-----------GG
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHcC-------ccccceeeH-----------HH
Confidence 67899999997 669999999999865 46788887542 223333321 123444432 23
Q ss_pred HHHHhcCccEEEEcCCCCCc
Q 042694 186 ADVIAKEVDVIVNSAANTTF 205 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~ 205 (554)
+.....++|+||++.+....
T Consensus 69 ~~~~~~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 69 LEEALQEADIVINATPSGMP 88 (135)
T ss_dssp HCHHHHTESEEEE-SSTTST
T ss_pred HHHHHhhCCeEEEecCCCCc
Confidence 33566789999999876544
No 381
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=91.73 E-value=1.5 Score=42.24 Aligned_cols=104 Identities=17% Similarity=0.236 Sum_probs=65.3
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCchhhhccCc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKSYQAFMLSK 166 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~~~~~~~~k 166 (554)
+|+|.|+ |-+|..+++.|...| |+++.++|.... +++++.. ..-+
T Consensus 1 kVlvvG~-GGlG~eilk~La~~G--vg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~n-------p~v~ 70 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMG--FGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRN-------PNCK 70 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHC-------CCCE
Confidence 4899996 559999999999865 678887653211 1111111 1236
Q ss_pred EEEEEccCCCCCCCCCHHH-HHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceec
Q 042694 167 LVPAVGNVCENNLGLEEDL-ADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVN 245 (554)
Q Consensus 167 v~~v~GDl~~~~lGLs~~~-~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~ 245 (554)
+.++.+++... ++ -....++.|+|+.+... +..-+.+-++|... -+++++.+|.+-.
T Consensus 71 i~~~~~~i~~~------~~~~~~f~~~~DvVi~a~Dn--------------~~aR~~ln~~c~~~--~iplI~~g~~G~~ 128 (234)
T cd01484 71 VVPYQNKVGPE------QDFNDTFFEQFHIIVNALDN--------------IIARRYVNGMLIFL--IVPLIESGTEGFK 128 (234)
T ss_pred EEEEeccCChh------hhchHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc--CCCEEEEcccCCc
Confidence 77777777543 22 23566899999987443 12233466777764 3688888886665
Q ss_pred cc
Q 042694 246 GQ 247 (554)
Q Consensus 246 ~~ 247 (554)
|.
T Consensus 129 G~ 130 (234)
T cd01484 129 GN 130 (234)
T ss_pred eE
Confidence 54
No 382
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=91.72 E-value=0.27 Score=50.39 Aligned_cols=35 Identities=9% Similarity=0.172 Sum_probs=28.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
..+|.|.||||++|..|++.|.++++.+..+..+.
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~la 41 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLA 41 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEE
Confidence 46899999999999999999987665555666554
No 383
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=91.44 E-value=0.39 Score=48.07 Aligned_cols=26 Identities=19% Similarity=0.372 Sum_probs=23.3
Q ss_pred EEEEecccccccHHHHHHHHhhCCCcc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVG 138 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~ 138 (554)
+|.|.|||||.|..|++.|.+ .|+++
T Consensus 3 ~v~IvGasGy~G~el~rlL~~-HP~~e 28 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSG-RDDIE 28 (310)
T ss_pred eEEEECCCChhHHHHHHHHhC-CCCeE
Confidence 699999999999999999987 58873
No 384
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=91.35 E-value=1.5 Score=44.25 Aligned_cols=114 Identities=15% Similarity=0.106 Sum_probs=71.0
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCch--hhhc-cCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSY--QAFM-LSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~--~~~~-~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
+|.|.|+ |.+|..++..|+.++ -+..++++|... ++.+...-+.. .... ..++....+| ++.
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~-~~a~g~a~DL~~~~~~~~~~~~~i~~~~------------y~~ 65 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALG-LFSEIVLIDVNE-GVAEGEALDFHHATALTYSTNTKIRAGD------------YDD 65 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCc-chhhHHHHHHHhhhccCCCCCEEEEECC------------HHH
Confidence 4789998 999999999998753 456788887410 11111100000 0001 1234334444 332
Q ss_pred HhcCccEEEEcCCCCCc-hhh--HHHHHHHhchHHHHHHHHHHHcCCCceEEEEeec
Q 042694 189 IAKEVDVIVNSAANTTF-DER--YDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTA 242 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~-~~~--~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~ 242 (554)
++++|+|+-+|+..+- .+. -.++...|+.=.+++.+...+. +...++.+-|-
T Consensus 66 -~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~ivvsN 120 (307)
T cd05290 66 -CADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVIILITN 120 (307)
T ss_pred -hCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEecC
Confidence 4799999999997543 333 3678899999999999998885 56666666553
No 385
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=91.33 E-value=0.46 Score=46.62 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=24.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
++|.|+|++|.+|+.+++.+.+ .++++-+.+++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~-~~~~elvav~d 34 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEA-AEDLELVAAVD 34 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHh-CCCCEEEEEEe
Confidence 5899999999999999987765 35553333444
No 386
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=91.30 E-value=2.2 Score=42.45 Aligned_cols=105 Identities=16% Similarity=0.215 Sum_probs=65.1
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCchh
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSYQ 160 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~~ 160 (554)
+-....+|||.|+.| ||..+++.|...| |++|.+.|... .+++++..+
T Consensus 15 ~kL~~s~VLIvG~gG-LG~EiaKnLalaG--Vg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp---- 87 (286)
T cd01491 15 KKLQKSNVLISGLGG-LGVEIAKNLILAG--VKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNP---- 87 (286)
T ss_pred HHHhcCcEEEEcCCH-HHHHHHHHHHHcC--CCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCC----
Confidence 335667899999866 9999999999865 56888765321 112222221
Q ss_pred hhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEe
Q 042694 161 AFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVS 240 (554)
Q Consensus 161 ~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vS 240 (554)
.-+|.++.+++. + ....+.|+|+-+... ++... .+-++|++. + .+|++..
T Consensus 88 ---~V~V~~~~~~~~-------~----~~l~~fdvVV~~~~~------~~~~~--------~in~~c~~~-~-ipfI~a~ 137 (286)
T cd01491 88 ---YVPVTVSTGPLT-------T----DELLKFQVVVLTDAS------LEDQL--------KINEFCHSP-G-IKFISAD 137 (286)
T ss_pred ---CCEEEEEeccCC-------H----HHHhcCCEEEEecCC------HHHHH--------HHHHHHHHc-C-CEEEEEe
Confidence 234555555421 2 244688999987542 22222 345777762 3 5899988
Q ss_pred eceeccc
Q 042694 241 TAYVNGQ 247 (554)
Q Consensus 241 T~~v~~~ 247 (554)
|.+.+|.
T Consensus 138 ~~G~~G~ 144 (286)
T cd01491 138 TRGLFGS 144 (286)
T ss_pred ccccEEE
Confidence 8777765
No 387
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=91.09 E-value=0.37 Score=48.44 Aligned_cols=36 Identities=25% Similarity=0.335 Sum_probs=30.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
+++|.|.||||-+|+.+++.|-++.+.+..++.+.+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS 36 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLAS 36 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEec
Confidence 368999999999999999999987788876776653
No 388
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=90.67 E-value=0.93 Score=39.19 Aligned_cols=30 Identities=20% Similarity=0.370 Sum_probs=23.0
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEE
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFII 143 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~ 143 (554)
|.|.|+||.||+.-++-+-+ .++--+|+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~-~~d~f~v~~L 30 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRK-HPDKFEVVAL 30 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHH-CTTTEEEEEE
T ss_pred CEEEcCCcHHHHHHHHHHHh-CCCceEEEEE
Confidence 67999999999999988776 4533367755
No 389
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=90.53 E-value=1.4 Score=37.96 Aligned_cols=88 Identities=20% Similarity=0.338 Sum_probs=48.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCC-CCCCC-CHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCE-NNLGL-EEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~-~~lGL-s~~~~~~ 188 (554)
++|.|.|++|-+|+.+++.+++. +++.-+-.++...-+ ..+... |++.. ...|. -.++++.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~~~----~~g~d~------------g~~~~~~~~~~~v~~~l~~ 63 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKPSA----KVGKDV------------GELAGIGPLGVPVTDDLEE 63 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTTST----TTTSBC------------HHHCTSST-SSBEBS-HHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCCcc----cccchh------------hhhhCcCCcccccchhHHH
Confidence 47999999999999999999983 455223333332100 000000 01000 00110 0156677
Q ss_pred HhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHc
Q 042694 189 IAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQC 230 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~ 230 (554)
+.+++|+||++.- -.++...++.|.+.
T Consensus 64 ~~~~~DVvIDfT~---------------p~~~~~~~~~~~~~ 90 (124)
T PF01113_consen 64 LLEEADVVIDFTN---------------PDAVYDNLEYALKH 90 (124)
T ss_dssp HTTH-SEEEEES----------------HHHHHHHHHHHHHH
T ss_pred hcccCCEEEEcCC---------------hHHhHHHHHHHHhC
Confidence 7778999999751 13456678888875
No 390
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=90.51 E-value=3.4 Score=40.64 Aligned_cols=37 Identities=24% Similarity=0.405 Sum_probs=29.6
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
.+.+++.+|+|.|+ |-+|+++++.|.+.| |+++.++|
T Consensus 25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~G--Vg~itLiD 61 (268)
T PRK15116 25 LQLFADAHICVVGI-GGVGSWAAEALARTG--IGAITLID 61 (268)
T ss_pred HHHhcCCCEEEECc-CHHHHHHHHHHHHcC--CCEEEEEe
Confidence 34467789999996 569999999999975 56788765
No 391
>PRK14852 hypothetical protein; Provisional
Probab=90.49 E-value=2.7 Score=48.44 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=68.9
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHH-------------------------HHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFK-------------------------CLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~-------------------------~l~~~~~~~~ 159 (554)
++-.+..+|+|.|+.| +|+.+++.|.+.| |+++.++|...++ ++++-.
T Consensus 327 Q~kL~~srVlVvGlGG-lGs~ia~~LAraG--VG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~IN---- 399 (989)
T PRK14852 327 QRRLLRSRVAIAGLGG-VGGIHLMTLARTG--IGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVN---- 399 (989)
T ss_pred HHHHhcCcEEEECCcH-HHHHHHHHHHHcC--CCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHC----
Confidence 4456778999999755 9999999999875 6788876532211 111111
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
..-+|+++...+ +++....+++++|+||.+.-...+. ..+.+.+.|.+. -.++|+.
T Consensus 400 ---P~v~I~~~~~~I-------~~en~~~fl~~~DiVVDa~D~~~~~------------~rr~l~~~c~~~--~IP~I~a 455 (989)
T PRK14852 400 ---PFLDIRSFPEGV-------AAETIDAFLKDVDLLVDGIDFFALD------------IRRRLFNRALEL--GIPVITA 455 (989)
T ss_pred ---CCCeEEEEecCC-------CHHHHHHHhhCCCEEEECCCCccHH------------HHHHHHHHHHHc--CCCEEEe
Confidence 122555555544 3467778889999999875432221 123456667653 3578887
Q ss_pred eeceecc
Q 042694 240 STAYVNG 246 (554)
Q Consensus 240 ST~~v~~ 246 (554)
++....|
T Consensus 456 g~~G~~g 462 (989)
T PRK14852 456 GPLGYSC 462 (989)
T ss_pred eccccCe
Confidence 7754443
No 392
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=90.46 E-value=3.6 Score=36.18 Aligned_cols=105 Identities=16% Similarity=0.198 Sum_probs=63.6
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH---------------------HHHHHHcCCchhhh-ccCcEEE
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF---------------------KCLKQTYGKSYQAF-MLSKLVP 169 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~---------------------~~l~~~~~~~~~~~-~~~kv~~ 169 (554)
+|+|.|+ |=+|+.+++.|.+.| ++++.++|.... +.+++.. ... ..-++..
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~G--v~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l----~~~~p~v~i~~ 73 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSG--VGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRL----NELNPGVNVTA 73 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCC--CCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHH----HHHCCCcEEEE
Confidence 4899997 779999999999865 467887753210 0011110 000 1235555
Q ss_pred EEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceecc
Q 042694 170 AVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 170 v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~ 246 (554)
+..++... ....+.++.|+||-+... + .....+.++|++. -.+|+.+++....+
T Consensus 74 ~~~~~~~~-------~~~~~~~~~diVi~~~d~--~------------~~~~~l~~~~~~~--~i~~i~~~~~g~~g 127 (143)
T cd01483 74 VPEGISED-------NLDDFLDGVDLVIDAIDN--I------------AVRRALNRACKEL--GIPVIDAGGLGLGG 127 (143)
T ss_pred EeeecChh-------hHHHHhcCCCEEEECCCC--H------------HHHHHHHHHHHHc--CCCEEEEcCCCcEE
Confidence 65555433 235666899999998765 1 1233466888874 35788888765444
No 393
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=90.29 E-value=1.9 Score=43.52 Aligned_cols=114 Identities=14% Similarity=0.141 Sum_probs=68.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|.|.|+ |.+|+.++..|+..+. ...|++++.. ..+.+....... .......+....+ +++.
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~-~~ei~l~D~~~~~~~~~a~dL~~~-~~~~~~~~~i~~~------------~~~~ 65 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGI-ADELVLIDINEEKAEGEALDLEDA-LAFLPSPVKIKAG------------DYSD 65 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCcchhhHhHhhHHHH-hhccCCCeEEEcC------------CHHH
Confidence 37899996 9999999999988653 2367777642 111111111000 0000112222211 1233
Q ss_pred HhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 189 IAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
++++|+||.+++..+- .++-.++.+.|+.-.+++.+..++. +.+.++.+=|
T Consensus 66 -l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~-~~~~~vivvs 117 (306)
T cd05291 66 -CKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS-GFDGIFLVAS 117 (306)
T ss_pred -hCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence 3799999999987543 3456688899999999999998875 4455544444
No 394
>smart00823 PKS_PP Phosphopantetheine attachment site. Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311.
Probab=90.17 E-value=0.19 Score=39.16 Aligned_cols=30 Identities=7% Similarity=-0.047 Sum_probs=27.3
Q ss_pred ccccccccCCchhHHHHHHHHHhhhhceee
Q 042694 33 RSIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 33 ~~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+.+||++|+||+.++.+...+++.+++.+
T Consensus 35 ~~~~l~~~g~dSl~~~~~~~~l~~~~~~~i 64 (86)
T smart00823 35 PDRPFRDLGLDSLTAVELRNRLEAATGLRL 64 (86)
T ss_pred CCCCHHHcCchHHHHHHHHHHHHHHHCCCC
Confidence 344999999999999999999999999887
No 395
>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1. APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.
Probab=90.14 E-value=2.9 Score=44.15 Aligned_cols=113 Identities=11% Similarity=0.057 Sum_probs=67.7
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~~ 159 (554)
++.....+|+|.|++| +|..+++-|... .|+++.++|.... +++++..+
T Consensus 15 Q~~L~~s~VlliG~gg-lGsEilKNLvL~--GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp--- 88 (425)
T cd01493 15 QAALESAHVCLLNATA-TGTEILKNLVLP--GIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNP--- 88 (425)
T ss_pred HHHHhhCeEEEEcCcH-HHHHHHHHHHHc--CCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCC---
Confidence 3445677999999888 999999999974 5788887764321 11222111
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
.-++.++..++..- .+.-..+.++.|+||-+... ... ...+.++|.+. -.+|+++
T Consensus 89 ----~V~i~~~~e~~~~l-----l~~~~~f~~~fdiVI~t~~~------~~~--------~~~L~~~c~~~--~iPlI~~ 143 (425)
T cd01493 89 ----DVNGSAVEESPEAL-----LDNDPSFFSQFTVVIATNLP------EST--------LLRLADVLWSA--NIPLLYV 143 (425)
T ss_pred ----CCEEEEEecccchh-----hhhHHHHhcCCCEEEECCCC------HHH--------HHHHHHHHHHc--CCCEEEE
Confidence 12334454443321 01223456788888843211 111 22356777763 4589999
Q ss_pred eeceecccc
Q 042694 240 STAYVNGQR 248 (554)
Q Consensus 240 ST~~v~~~~ 248 (554)
+|.+.+|.-
T Consensus 144 ~s~G~~G~v 152 (425)
T cd01493 144 RSYGLYGYI 152 (425)
T ss_pred ecccCEEEE
Confidence 999988864
No 396
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=90.08 E-value=2.4 Score=42.82 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=69.0
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|.|+|| |.+|..++..|+..+ -...++++|... .+........- .. ......+..+ .+++.
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~-~~~el~LiD~~~~~~~g~a~Dl~~~-~~-~~~~~~v~~~-----------~dy~~ 68 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKG-LADELVLVDVVEDKLKGEAMDLQHG-SA-FLKNPKIEAD-----------KDYSV 68 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHHHHHHHHHh-hc-cCCCCEEEEC-----------CCHHH
Confidence 48999996 999999999888754 445788887421 11111111000 00 0111111210 23344
Q ss_pred HhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEe
Q 042694 189 IAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVS 240 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vS 240 (554)
++++|+||-+|+..+- .+.-.++...|+.-.+++.+..++. +.+.++.+=
T Consensus 69 -~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vivv 119 (312)
T cd05293 69 -TANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY-SPNAILLVV 119 (312)
T ss_pred -hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEc
Confidence 4899999999887443 3456688899999999999998885 444444333
No 397
>PRK06153 hypothetical protein; Provisional
Probab=89.89 E-value=3.9 Score=42.22 Aligned_cols=110 Identities=15% Similarity=0.228 Sum_probs=65.5
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHH-----HH-----HHHcCC----------chhhhc
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFK-----CL-----KQTYGK----------SYQAFM 163 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~-----~l-----~~~~~~----------~~~~~~ 163 (554)
+++-+++.+|+|.|+.| +|+++++.|.+.| |++|.++|...++ |. .+..++ .... .
T Consensus 170 ~q~kL~~~~VaIVG~GG-~GS~Va~~LAR~G--VgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~-i 245 (393)
T PRK06153 170 LSAKLEGQRIAIIGLGG-TGSYILDLVAKTP--VREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSN-M 245 (393)
T ss_pred HHHHHhhCcEEEEcCCc-cHHHHHHHHHHcC--CCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHH-h
Confidence 35667889999999755 9999999999975 6789987642211 10 011000 0011 2
Q ss_pred cCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 164 LSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 164 ~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
..++.++...+. ++... .+.++|+||-|.-. ..+-..+.++|.+. ..++|.++-
T Consensus 246 n~~I~~~~~~I~-------~~n~~-~L~~~DiV~dcvDn--------------~~aR~~ln~~a~~~--gIP~Id~G~ 299 (393)
T PRK06153 246 RRGIVPHPEYID-------EDNVD-ELDGFTFVFVCVDK--------------GSSRKLIVDYLEAL--GIPFIDVGM 299 (393)
T ss_pred CCeEEEEeecCC-------HHHHH-HhcCCCEEEEcCCC--------------HHHHHHHHHHHHHc--CCCEEEeee
Confidence 235666655442 35554 34799999998652 22223455667663 446777654
No 398
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=89.74 E-value=1.1 Score=51.70 Aligned_cols=162 Identities=14% Similarity=0.208 Sum_probs=105.9
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch----hHH-HHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE----LFK-CLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~----~~~-~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
..++.+|+||-|-.|-.|..-|..+|- +++++..+. .+. +..+. |.. ..-+|.+-.-|++..
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~vrr----Wr~-~GVqV~vsT~nitt~------ 1833 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALMVRR----WRR-RGVQVQVSTSNITTA------ 1833 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHHHHH----HHh-cCeEEEEecccchhh------
Confidence 457899999999999999999998774 455554322 111 11111 110 122444455667665
Q ss_pred HHHHHHhc------CccEEEEcCCCCCc-------hhhHHHHHHHhchHHHHHHHHHHH-cCCCceEEEEeeceeccccc
Q 042694 184 DLADVIAK------EVDVIVNSAANTTF-------DERYDIAIDINTRGPCRLMEFAKQ-CNKLKLFVQVSTAYVNGQRR 249 (554)
Q Consensus 184 ~~~~~l~~------~vdiViH~AA~v~~-------~~~~~~~~~~Nv~gt~~ll~la~~-~~~~k~~v~vST~~v~~~~~ 249 (554)
+....|++ -|--|||+|+..+- .++++..-+.-+.||.+|=+..++ |+.++-||..||.++--...
T Consensus 1834 ~ga~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~ 1913 (2376)
T KOG1202|consen 1834 EGARGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNA 1913 (2376)
T ss_pred hhHHHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCC
Confidence 55666655 46789999987652 235667777789999999888875 57889999999987733221
Q ss_pred ceeeccccCCCCCcccccccccccCCCCCCChHHHHHHhhhccCCCCchHHHHHHHhhhhhcCCCcEEEEcccee
Q 042694 250 GKVMEKPFCMGDSIAKENFVSNSRRLIPTLDVENEMKLALESKEFSTDGEVAQKMKGLGLERGDIPVVIIRPSVI 324 (554)
Q Consensus 250 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~k~~~~~k~~ae~l~e~~~~~~glp~~I~Rp~~V 324 (554)
| . .-|...+..-|+++|+-.. .|+|-+.+-=|.|
T Consensus 1914 G---Q-------------------------------------tNYG~aNS~MERiceqRr~-~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1914 G---Q-------------------------------------TNYGLANSAMERICEQRRH-EGFPGTAIQWGAI 1947 (2376)
T ss_pred c---c-------------------------------------cccchhhHHHHHHHHHhhh-cCCCcceeeeecc
Confidence 1 0 0355556677888886544 4888777766555
No 399
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=89.51 E-value=7.6 Score=36.46 Aligned_cols=87 Identities=17% Similarity=0.309 Sum_probs=52.6
Q ss_pred chhhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHH--HHHH------HcCCc--------hhh-hccC
Q 042694 103 GIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFK--CLKQ------TYGKS--------YQA-FMLS 165 (554)
Q Consensus 103 ~i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~--~l~~------~~~~~--------~~~-~~~~ 165 (554)
..++-.+.++|+|.|+ |-+|+.++..|.+.| |++++++|....+ .+.+ ..+.. ... ...-
T Consensus 14 ~~q~~L~~~~V~IvG~-GglGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~ 90 (200)
T TIGR02354 14 KIVQKLEQATVAICGL-GGLGSNVAINLARAG--IGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYT 90 (200)
T ss_pred HHHHHHhCCcEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCC
Confidence 3455577889999998 569999999999875 5677776543100 0000 00000 000 0112
Q ss_pred cEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEc
Q 042694 166 KLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNS 199 (554)
Q Consensus 166 kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~ 199 (554)
++..+..+++ ++....+.+++|+|+-+
T Consensus 91 ~i~~~~~~i~-------~~~~~~~~~~~DlVi~a 117 (200)
T TIGR02354 91 EIEAYDEKIT-------EENIDKFFKDADIVCEA 117 (200)
T ss_pred EEEEeeeeCC-------HhHHHHHhcCCCEEEEC
Confidence 4555555554 35667778899999998
No 400
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=89.32 E-value=2.1 Score=42.99 Aligned_cols=118 Identities=16% Similarity=0.039 Sum_probs=71.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCc--hhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKS--YQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~--~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|.|+|| |.+|+.++..|+.++.. ..++++|.. .+...-..-+. ........+. +.+| .+++.
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~-~~~~~G~a~DL~~~~~~~~~~~~-i~~~----------~~y~~ 66 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDIN-EEKAEGVALDLSHAAAPLGSDVK-ITGD----------GDYED 66 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEcc-cccccchhcchhhcchhccCceE-EecC----------CChhh
Confidence 47999999 99999999999765432 277777643 00000000000 0000111211 2222 11333
Q ss_pred HhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeecee
Q 042694 189 IAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYV 244 (554)
Q Consensus 189 l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v 244 (554)
+++.|+|+-+||.-+- .+.-.++...|..=.+.+.+...+. ..+.++.|=|.=|
T Consensus 67 -~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlVvtNPv 121 (313)
T COG0039 67 -LKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLVVTNPV 121 (313)
T ss_pred -hcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEEecCcH
Confidence 3799999999987553 4466788999999999999888874 5567777766433
No 401
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=89.21 E-value=1 Score=47.98 Aligned_cols=77 Identities=12% Similarity=0.142 Sum_probs=48.0
Q ss_pred ccCcEEEEecc----------------cccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEE
Q 042694 108 LKAKNFFVTGA----------------TGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAV 171 (554)
Q Consensus 108 ~~~~~VlITGa----------------TGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~ 171 (554)
++|++||||+| ||-+|..|.+.+...|.+| .++..+.- + + ....+..+.
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~V---tlI~Gp~~--~----~------~p~~v~~i~ 318 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEV---TLISGPVD--L----A------DPQGVKVIH 318 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcE---EEEeCCcC--C----C------CCCCceEEE
Confidence 68999999976 6889999999999999766 22222210 0 0 112333343
Q ss_pred ccCCCCCCCCCHHHHHHHhc--CccEEEEcCCCCCch
Q 042694 172 GNVCENNLGLEEDLADVIAK--EVDVIVNSAANTTFD 206 (554)
Q Consensus 172 GDl~~~~lGLs~~~~~~l~~--~vdiViH~AA~v~~~ 206 (554)
.+=. ++.++.+.+ ..|++||+||...|.
T Consensus 319 V~ta-------~eM~~av~~~~~~Di~I~aAAVaDyr 348 (475)
T PRK13982 319 VESA-------RQMLAAVEAALPADIAIFAAAVADWR 348 (475)
T ss_pred ecCH-------HHHHHHHHhhCCCCEEEEecccccee
Confidence 3211 133333332 479999999987663
No 402
>PRK05087 D-alanine--poly(phosphoribitol) ligase subunit 2; Validated
Probab=89.13 E-value=0.39 Score=37.65 Aligned_cols=30 Identities=10% Similarity=0.006 Sum_probs=27.8
Q ss_pred ccccccccCC-chhHHHHHHHHHhhhhceee
Q 042694 33 RSIMHCQGGG-KTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 33 ~~~~Ff~~GG-~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+.++|+.|+ |||-++.|...|.++||+.+
T Consensus 24 ~d~~l~~~g~lDSl~~veli~~lE~~fgi~i 54 (78)
T PRK05087 24 MDEDLFEEGILDSMGTVELLVELENRFDIEV 54 (78)
T ss_pred CccchhhccCcchHHHHHHHHHHHHHhCCcc
Confidence 4559999997 99999999999999999998
No 403
>TIGR01408 Ube1 ubiquitin-activating enzyme E1. This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.
Probab=88.74 E-value=2.7 Score=49.22 Aligned_cols=107 Identities=11% Similarity=0.161 Sum_probs=66.2
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh-------------------------HHHHHHHcCCchh
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL-------------------------FKCLKQTYGKSYQ 160 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~-------------------------~~~l~~~~~~~~~ 160 (554)
.-....+|||.|+.| ||..+++.|...| |++|.++|... .+++++..+
T Consensus 20 ~kL~~s~VLIiG~gG-LG~EiaKnL~laG--Vg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~eLNp---- 92 (1008)
T TIGR01408 20 QKMAKSNVLISGMGG-LGLEIAKNLVLAG--VKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLAELNP---- 92 (1008)
T ss_pred HHHhhCcEEEECCCH-HHHHHHHHHHHcC--CCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHHHHCC----
Confidence 345667899999866 9999999999865 67888765321 122222221
Q ss_pred hhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEe
Q 042694 161 AFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVS 240 (554)
Q Consensus 161 ~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vS 240 (554)
.-+|.++.+++. ..++++.|+|+-+.. +++.. ..+-++|++.+...+|++.+
T Consensus 93 ---~V~V~~~~~~l~-----------~e~l~~fdvVV~t~~------~~~~~--------~~in~~cr~~~~~I~fI~~~ 144 (1008)
T TIGR01408 93 ---YVHVSSSSVPFN-----------EEFLDKFQCVVLTEM------SLPLQ--------KEINDFCHSQCPPIAFISAD 144 (1008)
T ss_pred ---CceEEEecccCC-----------HHHHcCCCEEEECCC------CHHHH--------HHHHHHHHHcCCCeEEEEEe
Confidence 224555555442 125678999998632 22232 23558888743235788888
Q ss_pred eceeccc
Q 042694 241 TAYVNGQ 247 (554)
Q Consensus 241 T~~v~~~ 247 (554)
+.+.+|.
T Consensus 145 ~~G~~G~ 151 (1008)
T TIGR01408 145 VRGLFGS 151 (1008)
T ss_pred ecceEEE
Confidence 8776653
No 404
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=88.67 E-value=1.6 Score=37.21 Aligned_cols=25 Identities=28% Similarity=0.614 Sum_probs=21.0
Q ss_pred EEEEecccccccHHHHHHHHhhCCCc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDV 137 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V 137 (554)
+|.|+|++|.+|+.+++.|... +++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~ 25 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDF 25 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCc
Confidence 4789999999999999988873 455
No 405
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=88.64 E-value=1.9 Score=42.43 Aligned_cols=115 Identities=12% Similarity=0.041 Sum_probs=67.4
Q ss_pred EEEecccccccHHHHHHHHhhCC-CccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 113 FFVTGATGFLAKVLIEKILRTVP-DVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~-~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
|.|.||+|.+|..++..|+..+. .+.+|+++|.. ..+................++. . . .+....
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~--~-----~------~d~~~~ 67 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS--I-----T------DDPYEA 67 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE--E-----C------CchHHH
Confidence 57899999999999999987551 33478877642 1222222111100000011111 1 1 222334
Q ss_pred hcCccEEEEcCCCCCch-hhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 190 AKEVDVIVNSAANTTFD-ERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
++++|+|+-+++..+.. .........|+.-.+++.+...+. ..+.++.+=|
T Consensus 68 ~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~-~p~a~~i~~t 119 (263)
T cd00650 68 FKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY-SPDAWIIVVS 119 (263)
T ss_pred hCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 58999999998875543 344567788999999999888774 3444443334
No 406
>PRK05828 acyl carrier protein; Validated
Probab=88.64 E-value=0.32 Score=38.74 Aligned_cols=28 Identities=4% Similarity=-0.202 Sum_probs=26.8
Q ss_pred ccccccCCchhHHHHHHHHHhhhhceee
Q 042694 35 IMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 35 ~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+|.+||-|||-.+.|...|.++||+.+
T Consensus 30 ~~~~dLg~DSLd~velv~~lE~~f~I~i 57 (84)
T PRK05828 30 KPYRELKIDSLDMFSIIVSLESEFNIEF 57 (84)
T ss_pred CCHHhcCCCHHHHHHHHHHHHHHHCCCc
Confidence 4889999999999999999999999998
No 407
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=88.39 E-value=3 Score=44.51 Aligned_cols=74 Identities=15% Similarity=0.204 Sum_probs=50.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc--chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN--AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~--~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
..++|+|.|+ |.+|+.+++.|.+.+.+ +++++ ....+.+++.. ..+..+.||.+++ +.+
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~---v~vid~~~~~~~~~~~~~---------~~~~~i~gd~~~~------~~L 290 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYS---VKLIERDPERAEELAEEL---------PNTLVLHGDGTDQ------ELL 290 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHHHHHHHHHHC---------CCCeEEECCCCCH------HHH
Confidence 4688999997 99999999999887664 44443 33334444322 2456799999887 665
Q ss_pred HH-HhcCccEEEEcCC
Q 042694 187 DV-IAKEVDVIVNSAA 201 (554)
Q Consensus 187 ~~-l~~~vdiViH~AA 201 (554)
.. -.+++|.|+-+..
T Consensus 291 ~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 291 EEEGIDEADAFIALTN 306 (453)
T ss_pred HhcCCccCCEEEECCC
Confidence 43 3468899885543
No 408
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=88.20 E-value=7.6 Score=38.76 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=24.7
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
+|+|.|+ |-||..+++.|.+.| |++|.++|
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aG--Vg~ItlvD 30 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWG--VRHITFVD 30 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcC--CCeEEEEC
Confidence 5899997 559999999999864 77888775
No 409
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=88.01 E-value=1 Score=45.32 Aligned_cols=27 Identities=19% Similarity=0.380 Sum_probs=22.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDV 137 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V 137 (554)
+.+|.|.||||+.|..|++.|.+ .|.+
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~-hp~~ 28 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAG-RSDI 28 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhc-CCCe
Confidence 35899999999999999997776 5666
No 410
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=88.00 E-value=6.2 Score=39.35 Aligned_cols=105 Identities=12% Similarity=0.195 Sum_probs=62.5
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhH-------------------------HHHHHHcCCchhhhccCc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELF-------------------------KCLKQTYGKSYQAFMLSK 166 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~-------------------------~~l~~~~~~~~~~~~~~k 166 (554)
+|||.|+. -+|..+++.|...| |+++.++|.... +++++.. ..-+
T Consensus 1 kVlVVGaG-GlG~eilknLal~G--vg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~n-------p~v~ 70 (291)
T cd01488 1 KILVIGAG-GLGCELLKNLALSG--FRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRV-------PGVN 70 (291)
T ss_pred CEEEECCC-HHHHHHHHHHHHcC--CCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHC-------CCCE
Confidence 58999974 59999999999865 678887753211 1111111 1236
Q ss_pred EEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHc------CCCceEEEEe
Q 042694 167 LVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQC------NKLKLFVQVS 240 (554)
Q Consensus 167 v~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~------~~~k~~v~vS 240 (554)
++++.+++.+. + ..+.++.|+|+.+.-. +. .-+.+-+.|.+. ...++|+..+
T Consensus 71 I~~~~~~i~~~-------~-~~f~~~fdvVi~alDn--~~------------aR~~in~~~~~~~~~~~~~~~iPlI~~g 128 (291)
T cd01488 71 VTPHFGKIQDK-------D-EEFYRQFNIIICGLDS--IE------------ARRWINGTLVSLLLYEDPESIIPLIDGG 128 (291)
T ss_pred EEEEecccCch-------h-HHHhcCCCEEEECCCC--HH------------HHHHHHHHHHHhccccccccCccEEEEE
Confidence 77788877643 1 3456899999986433 11 111122222221 2357899999
Q ss_pred eceecccc
Q 042694 241 TAYVNGQR 248 (554)
Q Consensus 241 T~~v~~~~ 248 (554)
|.+-.|..
T Consensus 129 t~G~~G~v 136 (291)
T cd01488 129 TEGFKGHA 136 (291)
T ss_pred EcccEEEE
Confidence 88776653
No 411
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=87.78 E-value=7.1 Score=43.03 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=29.2
Q ss_pred hhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 106 KFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 106 ~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
+-.+..+|||.|| |-||..+++.|++. .|++|.++|
T Consensus 334 ekL~~~kVLIvGa-GGLGs~VA~~La~~--GVg~ItlVD 369 (664)
T TIGR01381 334 ERYSQLKVLLLGA-GTLGCNVARCLIGW--GVRHITFVD 369 (664)
T ss_pred HHHhcCeEEEECC-cHHHHHHHHHHHHc--CCCeEEEEc
Confidence 3456789999997 55999999999985 477888765
No 412
>PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria. They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A.
Probab=87.76 E-value=2.7 Score=40.82 Aligned_cols=76 Identities=26% Similarity=0.346 Sum_probs=47.4
Q ss_pred hCCCccEEEEEc-----chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchh
Q 042694 133 TVPDVGKIFIIN-----AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDE 207 (554)
Q Consensus 133 ~~~~V~~i~~~~-----~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~ 207 (554)
..|.++.|++.. .++|+++|+..+ .|..+.|+..+ +-..+.+.+|++++.-
T Consensus 59 dDp~mKaIVv~q~vpGt~~af~kIkekRp---------DIl~ia~~~~E--------Dp~~i~~~aDi~~~~D------- 114 (275)
T PF12683_consen 59 DDPDMKAIVVSQAVPGTAEAFRKIKEKRP---------DILLIAGEPHE--------DPEVISSAADIVVNPD------- 114 (275)
T ss_dssp G-TTEEEEEEE-SS---HHHHHHHHHH-T---------TSEEEESS--S---------HHHHHHHSSEEEE---------
T ss_pred cCCCccEEEEeCCCcchHHHHHHHHhcCC---------CeEEEcCCCcC--------CHHHHhhccCeEeccc-------
Confidence 356665555443 256888988765 46788888764 4455667799999942
Q ss_pred hHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 208 RYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 208 ~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
+...-..+..+|+++ +.+.|||+|-
T Consensus 115 --------~~~~G~~i~~~Ak~m-GAktFVh~sf 139 (275)
T PF12683_consen 115 --------EISRGYTIVWAAKKM-GAKTFVHYSF 139 (275)
T ss_dssp --------HHHHHHHHHHHHHHT-T-S-EEEEEE
T ss_pred --------hhhccHHHHHHHHHc-CCceEEEEec
Confidence 122345689999998 8999999995
No 413
>PLN02602 lactate dehydrogenase
Probab=87.67 E-value=4.8 Score=41.36 Aligned_cols=112 Identities=11% Similarity=0.086 Sum_probs=68.1
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
++|.|+|+ |.+|+.++..|+..+ -...++++|.. ..+......... .. ...... +.++ .+++.
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~-l~~el~LiDi~~~~~~g~a~DL~~~-~~-~~~~~~-i~~~----------~dy~~ 102 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQD-LADELALVDVNPDKLRGEMLDLQHA-AA-FLPRTK-ILAS----------TDYAV 102 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCCCchhhHHHHHHHhh-hh-cCCCCE-EEeC----------CCHHH
Confidence 69999996 999999999988754 34578887742 111111111000 00 112222 2221 12333
Q ss_pred HhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 189 IAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 189 l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
++++|+||-+|+..+ ..++-.++...|+.-.+++.+..++. ..+.++.+
T Consensus 103 -~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~-~p~~iviv 152 (350)
T PLN02602 103 -TAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY-SPDTILLI 152 (350)
T ss_pred -hCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEE
Confidence 579999999998743 34456688889999999998888874 44444333
No 414
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=87.33 E-value=1.9 Score=41.34 Aligned_cols=74 Identities=12% Similarity=0.210 Sum_probs=50.2
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH-
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI- 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l- 189 (554)
|+++|.|+ |=+|..+++.|.+.+++| .++-.+.....+... .......+.||-+++ +.+.++
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~V-v~Id~d~~~~~~~~~---------~~~~~~~v~gd~t~~------~~L~~ag 63 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNV-VLIDRDEERVEEFLA---------DELDTHVVIGDATDE------DVLEEAG 63 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCce-EEEEcCHHHHHHHhh---------hhcceEEEEecCCCH------HHHHhcC
Confidence 46888886 889999999999998876 232223222222111 112467899999988 777776
Q ss_pred hcCccEEEEcCC
Q 042694 190 AKEVDVIVNSAA 201 (554)
Q Consensus 190 ~~~vdiViH~AA 201 (554)
++++|+++=+-+
T Consensus 64 i~~aD~vva~t~ 75 (225)
T COG0569 64 IDDADAVVAATG 75 (225)
T ss_pred CCcCCEEEEeeC
Confidence 578999986544
No 415
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=86.93 E-value=5.7 Score=33.24 Aligned_cols=68 Identities=12% Similarity=0.265 Sum_probs=45.1
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|.|. |-+|..+++.|.+.+. .+++++.. ..+.+++ ..+.++.||.+++ +.++.+-
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~---~vvvid~d~~~~~~~~~-----------~~~~~i~gd~~~~------~~l~~a~ 59 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGI---DVVVIDRDPERVEELRE-----------EGVEVIYGDATDP------EVLERAG 59 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTS---EEEEEESSHHHHHHHHH-----------TTSEEEES-TTSH------HHHHHTT
T ss_pred eEEEcC-CHHHHHHHHHHHhCCC---EEEEEECCcHHHHHHHh-----------cccccccccchhh------hHHhhcC
Confidence 578886 6799999999998542 55665532 2333332 2356899999988 7766653
Q ss_pred -cCccEEEEcCC
Q 042694 191 -KEVDVIVNSAA 201 (554)
Q Consensus 191 -~~vdiViH~AA 201 (554)
++++.|+=+..
T Consensus 60 i~~a~~vv~~~~ 71 (116)
T PF02254_consen 60 IEKADAVVILTD 71 (116)
T ss_dssp GGCESEEEEESS
T ss_pred ccccCEEEEccC
Confidence 58888887654
No 416
>PTZ00117 malate dehydrogenase; Provisional
Probab=86.75 E-value=3.8 Score=41.60 Aligned_cols=115 Identities=17% Similarity=0.178 Sum_probs=66.2
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
+.++|.|.|| |.+|..+...|...+ +..++++|... .+...-.... .......... +.+ . .++
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~--~~~l~L~Di~~~~~~g~~lDl~~-~~~~~~~~~~-i~~----~------~d~ 68 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKN--LGDVVLYDVIKGVPQGKALDLKH-FSTLVGSNIN-ILG----T------NNY 68 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCC--CCeEEEEECCCccchhHHHHHhh-hccccCCCeE-EEe----C------CCH
Confidence 4578999997 999999888877654 24677776421 1110000000 0000000111 111 1 344
Q ss_pred HHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCce-EEEEe
Q 042694 187 DVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKL-FVQVS 240 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~-~v~vS 240 (554)
+ .++++|+|+-+|+...- .....++...|..-.+++.+...+. ..+. ++.+|
T Consensus 69 ~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvs 122 (319)
T PTZ00117 69 E-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY-CPNAFVICVT 122 (319)
T ss_pred H-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 5 34899999999976443 3456678888988777888777764 3444 44443
No 417
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=86.60 E-value=2.4 Score=43.48 Aligned_cols=78 Identities=22% Similarity=0.330 Sum_probs=48.7
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc-chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN-AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~-~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
.-+|+.|||.||+|-+|+..++-....+ +.+|.... .+.++.+++ .+. + ..-|..++ +.
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~--~~~v~t~~s~e~~~l~k~-lGA-------d----~vvdy~~~------~~ 214 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAG--AIKVVTACSKEKLELVKK-LGA-------D----EVVDYKDE------NV 214 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcC--CcEEEEEcccchHHHHHH-cCC-------c----EeecCCCH------HH
Confidence 3568899999999999999987776544 33444433 333444443 332 1 12255544 44
Q ss_pred HHHHhc----CccEEEEcCCCCC
Q 042694 186 ADVIAK----EVDVIVNSAANTT 204 (554)
Q Consensus 186 ~~~l~~----~vdiViH~AA~v~ 204 (554)
.+.+.+ ++|+|++|++...
T Consensus 215 ~e~~kk~~~~~~DvVlD~vg~~~ 237 (347)
T KOG1198|consen 215 VELIKKYTGKGVDVVLDCVGGST 237 (347)
T ss_pred HHHHHhhcCCCccEEEECCCCCc
Confidence 444443 6999999998743
No 418
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=86.51 E-value=6.9 Score=37.49 Aligned_cols=114 Identities=18% Similarity=0.298 Sum_probs=62.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---------HHHHHHHcCCchhh-------hccCcEEEEE
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---------FKCLKQTYGKSYQA-------FMLSKLVPAV 171 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---------~~~l~~~~~~~~~~-------~~~~kv~~v~ 171 (554)
++..+|+|.|..| +|+..++.|.|+| +++|.++|..- ...+....++...+ ...+..++-.
T Consensus 28 l~~~~V~VvGiGG-VGSw~veALaRsG--ig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~ 104 (263)
T COG1179 28 LKQAHVCVVGIGG-VGSWAVEALARSG--IGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTA 104 (263)
T ss_pred HhhCcEEEEecCc-hhHHHHHHHHHcC--CCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEee
Confidence 4667899999755 9999999999976 56777654210 00000000100000 0111222222
Q ss_pred ccCCCCCCCCCHHHHHHHhc-CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccc
Q 042694 172 GNVCENNLGLEEDLADVIAK-EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 172 GDl~~~~lGLs~~~~~~l~~-~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~ 247 (554)
-|.. .+++.++.+.. +.|.||.+-- |+..-..|+..|... +. -.+||.++.+.
T Consensus 105 ~~~f-----~t~en~~~~~~~~~DyvIDaiD--------------~v~~Kv~Li~~c~~~-ki---~vIss~Gag~k 158 (263)
T COG1179 105 INDF-----ITEENLEDLLSKGFDYVIDAID--------------SVRAKVALIAYCRRN-KI---PVISSMGAGGK 158 (263)
T ss_pred hHhh-----hCHhHHHHHhcCCCCEEEEchh--------------hhHHHHHHHHHHHHc-CC---CEEeeccccCC
Confidence 2211 12355665554 6999998743 334455789999984 43 45777776554
No 419
>PRK06223 malate dehydrogenase; Reviewed
Probab=86.48 E-value=6.1 Score=39.79 Aligned_cols=107 Identities=14% Similarity=0.021 Sum_probs=60.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+++|.|.|| |.+|..++..+...+. . .|+++|... ++++.............. ..+.+... .+++.
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~-~-ev~L~D~~~-~~~~~~~~dl~~~~~~~~---~~~~i~~~------~d~~~- 67 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKEL-G-DVVLFDIVE-GVPQGKALDIAEAAPVEG---FDTKITGT------NDYED- 67 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-e-EEEEEECCC-chhHHHHHHHHhhhhhcC---CCcEEEeC------CCHHH-
Confidence 478999998 9999999998887543 2 677766411 111111100000000000 00111111 23444
Q ss_pred hcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHc
Q 042694 190 AKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQC 230 (554)
Q Consensus 190 ~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~ 230 (554)
++++|+||-+++... ....-.++...|+.-.+.+++...+.
T Consensus 68 ~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~ 109 (307)
T PRK06223 68 IAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY 109 (307)
T ss_pred HCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999987543 23345566778888888888877664
No 420
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=86.22 E-value=3.2 Score=44.24 Aligned_cols=33 Identities=9% Similarity=0.116 Sum_probs=26.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
+++++|+|||++| +|...++.|++.|. +|+..+
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~---~V~~~d 35 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGA---NVTVND 35 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCC---EEEEEc
Confidence 3578999999999 99999999988876 455555
No 421
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=86.06 E-value=6.7 Score=39.60 Aligned_cols=111 Identities=14% Similarity=0.069 Sum_probs=68.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHH----HcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQ----TYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~----~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++|.|.|+ |.+|..++..|+..+. +..|++++... ++.+. ..... . .........+ ++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~-~~~~g~a~dl~~~~--~-~~~~~~i~~~------------d~ 62 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINK-AKAEGEAMDLAHGT--P-FVKPVRIYAG------------DY 62 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCc-hhhhhHHHHHHccc--c-ccCCeEEeeC------------CH
Confidence 46999997 9999999999988663 34677776431 11111 11000 0 1111221222 23
Q ss_pred HHHhcCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 187 DVIAKEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
+. ++++|+||-+++... ...+...+...|+.-.+++.+...+. +.+.++.+-|
T Consensus 63 ~~-l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~-~~~giiiv~t 116 (308)
T cd05292 63 AD-CKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY-APDAILLVVT 116 (308)
T ss_pred HH-hCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 33 579999999998743 23456678888999999998888774 3445555544
No 422
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=86.02 E-value=1.1 Score=45.83 Aligned_cols=36 Identities=22% Similarity=0.392 Sum_probs=27.6
Q ss_pred CcEEEEecccccccHHHHHHHHh-hCCCccEEEEEcc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILR-TVPDVGKIFIINA 145 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~-~~~~V~~i~~~~~ 145 (554)
+.+|.|.||||++|..|++-|.+ ....+.++..+.+
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS 41 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSS 41 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEEC
Confidence 46899999999999999998874 4445555666653
No 423
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=85.58 E-value=1.9 Score=38.28 Aligned_cols=35 Identities=31% Similarity=0.415 Sum_probs=27.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
.++++|+|+|+ |.+|..+++.|.+.+ ..+|++.+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r 51 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNR 51 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcC
Confidence 45789999997 899999999998864 335666654
No 424
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=85.54 E-value=3.1 Score=43.22 Aligned_cols=29 Identities=14% Similarity=0.281 Sum_probs=25.5
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCc
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDV 137 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V 137 (554)
..++|.|.||+|.+|..+...|.+.|+.|
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V 125 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQV 125 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeE
Confidence 34789999999999999999999988654
No 425
>CHL00124 acpP acyl carrier protein; Validated
Probab=85.24 E-value=0.7 Score=36.47 Aligned_cols=29 Identities=10% Similarity=0.085 Sum_probs=27.0
Q ss_pred cccccc-cCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQ-GGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~-~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|.+ +|-|||..+.|...+.++||+.+
T Consensus 28 d~~l~~dlg~DSl~~~eli~~le~~f~i~i 57 (82)
T CHL00124 28 DANFTRDLGADSLDVVELVMAIEEKFDIEI 57 (82)
T ss_pred CcchhhhcCCcHHHHHHHHHHHHHHHCCcc
Confidence 448888 99999999999999999999998
No 426
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=85.20 E-value=5 Score=39.19 Aligned_cols=118 Identities=20% Similarity=0.190 Sum_probs=77.5
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCC-----CCCC-
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENN-----LGLE- 182 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~-----lGLs- 182 (554)
++-+|.|.||.|-||+-|.- ||+.+|.|....+.|-... .-|..|++..+ -|-.
T Consensus 27 ~~~KVAvlGAaGGIGQPLSL-LlK~np~Vs~LaLYDi~~~-------------------~GVaaDlSHI~T~s~V~g~~g 86 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSL-LLKLNPLVSELALYDIANT-------------------PGVAADLSHINTNSSVVGFTG 86 (345)
T ss_pred CcceEEEEecCCccCccHHH-HHhcCcccceeeeeecccC-------------------CcccccccccCCCCceeccCC
Confidence 45689999999999998765 4456788875554442100 01222333221 1111
Q ss_pred HHHHHHHhcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeeceeccc
Q 042694 183 EDLADVIAKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAYVNGQ 247 (554)
Q Consensus 183 ~~~~~~l~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~~ 247 (554)
++.++...+++|+|+-=|+.-+- ...-++++.+|..=.++|..++.++ -.+.++.+=|-=||..
T Consensus 87 ~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~-cP~A~i~vIsNPVNst 151 (345)
T KOG1494|consen 87 ADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC-CPNALILVISNPVNST 151 (345)
T ss_pred hhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh-CccceeEeecCccccc
Confidence 35677778999999999987553 3456789999999999999888774 3455666666555443
No 427
>PRK09184 acyl carrier protein; Provisional
Probab=85.20 E-value=0.78 Score=36.93 Aligned_cols=28 Identities=7% Similarity=-0.096 Sum_probs=25.9
Q ss_pred ccccc--cCCchhHHHHHHHHHhhhhceee
Q 042694 35 IMHCQ--GGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 35 ~~Ff~--~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
..||. +|-|||-++.|+..+.++||+.+
T Consensus 33 ~~l~~~dLglDSld~velv~~lE~~fgi~i 62 (89)
T PRK09184 33 APLYGEGLGLDSIDILEIALVISKRYGFQL 62 (89)
T ss_pred cccccccCCCcHHHHHHHHHHHHHHHCCcC
Confidence 37766 99999999999999999999998
No 428
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=84.60 E-value=1.1 Score=45.69 Aligned_cols=37 Identities=24% Similarity=0.421 Sum_probs=28.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
+..+|.|.||||++|..|++.|.++.+.+.++..+.+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS 39 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALAS 39 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc
Confidence 3568999999999999999988875444457776643
No 429
>TIGR01688 dltC D-alanine--poly(phosphoribitol) ligase, subunit 2. This protein is part of the teichoic acid operon in gram-positive organisms. Gram positive organisms incorporate teichoic acid in their cell walls, and in the fatty acid residues of the glycolipid component of the outer layer of the cytoplasmic membrane. This gene, dltC, encodes the alanyl carrier protein.
Probab=84.38 E-value=0.69 Score=35.61 Aligned_cols=31 Identities=3% Similarity=0.020 Sum_probs=28.5
Q ss_pred cccccccccCC-chhHHHHHHHHHhhhhceee
Q 042694 32 KRSIMHCQGGG-KTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 32 ~~~~~Ff~~GG-~Sl~a~~l~~~l~~~~~v~~ 62 (554)
..+.++|+.|- ||+.+++|...|.++||+.+
T Consensus 20 ~~d~~L~~~GllDS~~~v~Li~~lE~ef~I~i 51 (73)
T TIGR01688 20 NPDLELFEEGLLDSFGTVQLLLEIQNQFDIDV 51 (73)
T ss_pred CccHHHHHccchhHHHHHHHHHHHHHHhCCcc
Confidence 44559999998 99999999999999999999
No 430
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=84.38 E-value=1.9 Score=44.40 Aligned_cols=35 Identities=17% Similarity=0.276 Sum_probs=26.0
Q ss_pred cEEEEecccccccHHHHHHHHhh-CCCccEEEEEcc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRT-VPDVGKIFIINA 145 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~-~~~V~~i~~~~~ 145 (554)
.+|.|.||||++|..|++.||+. ...+.+++.+.+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss 37 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFST 37 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecc
Confidence 57999999999999999977763 223445666544
No 431
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=84.23 E-value=3 Score=37.96 Aligned_cols=58 Identities=16% Similarity=0.280 Sum_probs=42.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++++|+|.|+.+.+|..+++.|.+.+. +|++.++. .+++.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~---~V~v~~r~------------------------------------~~~l~ 82 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNA---TVTVCHSK------------------------------------TKNLK 82 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCC---EEEEEECC------------------------------------chhHH
Confidence 5789999999977889999999988653 34444321 03455
Q ss_pred HHhcCccEEEEcCCCCC
Q 042694 188 VIAKEVDVIVNSAANTT 204 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~ 204 (554)
....++|+||-+.+..+
T Consensus 83 ~~l~~aDiVIsat~~~~ 99 (168)
T cd01080 83 EHTKQADIVIVAVGKPG 99 (168)
T ss_pred HHHhhCCEEEEcCCCCc
Confidence 66789999999888754
No 432
>PRK04148 hypothetical protein; Provisional
Probab=84.08 E-value=4.7 Score=35.12 Aligned_cols=87 Identities=20% Similarity=0.193 Sum_probs=57.2
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
++++|++.| +| -|..+++.|.+.|. .|..+|... .+..++ ..+.++.+|+.++++
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~G~---~ViaIDi~~~aV~~a~~-----------~~~~~v~dDlf~p~~------- 72 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKESGF---DVIVIDINEKAVEKAKK-----------LGLNAFVDDLFNPNL------- 72 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHCCC---EEEEEECCHHHHHHHHH-----------hCCeEEECcCCCCCH-------
Confidence 457899998 57 78889999988775 566666432 222221 246789999999954
Q ss_pred HHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCc
Q 042694 187 DVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLK 234 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k 234 (554)
.+-+++|.|+-+=- +.++ ...++++|++. +..
T Consensus 73 -~~y~~a~liysirp-------p~el-------~~~~~~la~~~-~~~ 104 (134)
T PRK04148 73 -EIYKNAKLIYSIRP-------PRDL-------QPFILELAKKI-NVP 104 (134)
T ss_pred -HHHhcCCEEEEeCC-------CHHH-------HHHHHHHHHHc-CCC
Confidence 24468899997622 2222 23588999985 444
No 433
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=83.84 E-value=4 Score=39.65 Aligned_cols=35 Identities=26% Similarity=0.473 Sum_probs=26.8
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
+++|.|.||+|=+|+.|++.+.+. +++.-+-.+++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~ 36 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDR 36 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEec
Confidence 568999999999999999999874 56533334443
No 434
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=83.70 E-value=3.7 Score=41.85 Aligned_cols=77 Identities=18% Similarity=0.320 Sum_probs=44.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc-hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA-ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~-~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
.|.+|||+||||-+|...+.-+...|.. .|....+ ...+.++ ..+. +.+. |..+.+ + .+...
T Consensus 142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~--~v~~~~s~~k~~~~~-~lGA-------d~vi----~y~~~~--~-~~~v~ 204 (326)
T COG0604 142 PGETVLVHGAAGGVGSAAIQLAKALGAT--VVAVVSSSEKLELLK-ELGA-------DHVI----NYREED--F-VEQVR 204 (326)
T ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCc--EEEEecCHHHHHHHH-hcCC-------CEEE----cCCccc--H-HHHHH
Confidence 3789999999999999998877766542 3444333 2233333 2221 1111 122221 1 24444
Q ss_pred HHhc--CccEEEEcCCC
Q 042694 188 VIAK--EVDVIVNSAAN 202 (554)
Q Consensus 188 ~l~~--~vdiViH~AA~ 202 (554)
++.. ++|+|+.+-+.
T Consensus 205 ~~t~g~gvDvv~D~vG~ 221 (326)
T COG0604 205 ELTGGKGVDVVLDTVGG 221 (326)
T ss_pred HHcCCCCceEEEECCCH
Confidence 4543 69999998765
No 435
>PRK00982 acpP acyl carrier protein; Provisional
Probab=83.42 E-value=0.97 Score=35.21 Aligned_cols=30 Identities=13% Similarity=0.045 Sum_probs=27.4
Q ss_pred ccccc-cccCCchhHHHHHHHHHhhhhceee
Q 042694 33 RSIMH-CQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 33 ~~~~F-f~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.+.+| -++|-|||..+.+...++++||+.+
T Consensus 25 ~d~~l~~dlglDSl~~~~li~~le~~f~i~i 55 (78)
T PRK00982 25 PEASFVDDLGADSLDTVELVMALEEEFGIEI 55 (78)
T ss_pred CCcchHhhcCCCHHHHHHHHHHHHHHHCCCc
Confidence 34488 7999999999999999999999998
No 436
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=83.32 E-value=1.3 Score=45.34 Aligned_cols=33 Identities=18% Similarity=0.318 Sum_probs=24.3
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
++|.|+||||++|++|++.|.+ .+.+.-+.+++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~-~~~~~l~~v~~ 33 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAK-HPYFELAKVVA 33 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHh-CCCceEEEEEE
Confidence 3799999999999999997776 45553333333
No 437
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=83.12 E-value=1.7 Score=41.40 Aligned_cols=27 Identities=22% Similarity=0.225 Sum_probs=24.2
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDV 137 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V 137 (554)
|+|.|.||+|.+|+.+...|.+.+++|
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V 27 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKI 27 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEE
Confidence 479999999999999999999988655
No 438
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=82.99 E-value=2.3 Score=42.26 Aligned_cols=28 Identities=25% Similarity=0.347 Sum_probs=25.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCC
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVP 135 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~ 135 (554)
.+|++|+|.|++|.+|+.+...|++.+.
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga 184 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA 184 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999998664
No 439
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=82.97 E-value=3.1 Score=42.72 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=28.4
Q ss_pred cEEEEecccccccHHHHHHHH-hhCCCccEEEEEcc
Q 042694 111 KNFFVTGATGFLAKVLIEKIL-RTVPDVGKIFIINA 145 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL-~~~~~V~~i~~~~~ 145 (554)
++|.|.||||-+|+.+++.|. ++...+.+++.+.+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss 36 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFST 36 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEc
Confidence 478999999999999999998 55556667777754
No 440
>PRK07117 acyl carrier protein; Validated
Probab=82.97 E-value=1.1 Score=35.28 Aligned_cols=29 Identities=7% Similarity=-0.051 Sum_probs=26.9
Q ss_pred cccccccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|-+||-|||-.+.+...+.++||+.+
T Consensus 29 ~~~l~DLg~DSlD~veiv~~led~f~i~I 57 (79)
T PRK07117 29 EDSLVDLGANSMDRAEIVIMTLESLSLKI 57 (79)
T ss_pred CCChhhcCCChHHHHHHHHHHHHHHCCcc
Confidence 33888999999999999999999999998
No 441
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=82.49 E-value=14 Score=37.62 Aligned_cols=113 Identities=15% Similarity=0.115 Sum_probs=65.1
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--H--HHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--F--KCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~--~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
+.++|.|.|| |.+|..+...++..+. ..|+++|... . +.+...... ........+.. . .
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl--~~i~LvDi~~~~~~~~~ld~~~~~---~~~~~~~~I~~-~----------~ 67 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNL--GDVVLFDIVKNIPQGKALDISHSN---VIAGSNSKVIG-T----------N 67 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeCCCchhhHHHHHHHhhh---hccCCCeEEEE-C----------C
Confidence 4578999995 9999999988876543 3577776311 0 111111100 00111111111 0 2
Q ss_pred HHHHHhcCccEEEEcCCCCCc-hh-----hHHHHHHHhchHHHHHHHHHHHcCCCc-eEEEEe
Q 042694 185 LADVIAKEVDVIVNSAANTTF-DE-----RYDIAIDINTRGPCRLMEFAKQCNKLK-LFVQVS 240 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~-~~-----~~~~~~~~Nv~gt~~ll~la~~~~~~k-~~v~vS 240 (554)
+++. ++++|+||.+|+..+- .. +..++...|+.-.+++.+...+. ..+ .++.+|
T Consensus 68 d~~~-l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~-~p~a~~iv~s 128 (321)
T PTZ00082 68 NYED-IAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY-CPNAFVIVIT 128 (321)
T ss_pred CHHH-hCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 2333 4799999999976431 22 55677888988888888887775 344 344444
No 442
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=82.40 E-value=3.6 Score=40.84 Aligned_cols=59 Identities=22% Similarity=0.332 Sum_probs=43.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|++|+|.|+++.+|+-+...|++.+..| ++..+. . .++.
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatV---tv~~s~------------------------------t------~~l~ 196 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASV---TILHSR------------------------------S------KDMA 196 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeE---EEEeCC------------------------------c------hhHH
Confidence 579999999999999999999999876433 322211 1 3455
Q ss_pred HHhcCccEEEEcCCCCCc
Q 042694 188 VIAKEVDVIVNSAANTTF 205 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~ 205 (554)
...+++|+||-+.+.-++
T Consensus 197 ~~~~~ADIVIsAvg~p~~ 214 (286)
T PRK14175 197 SYLKDADVIVSAVGKPGL 214 (286)
T ss_pred HHHhhCCEEEECCCCCcc
Confidence 667899999998887554
No 443
>PRK07639 acyl carrier protein; Provisional
Probab=82.09 E-value=1.3 Score=35.48 Aligned_cols=29 Identities=0% Similarity=-0.236 Sum_probs=26.4
Q ss_pred cccccc-cCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHCQ-GGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff~-~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|++ +|-||+-++.|...|.++||+.+
T Consensus 29 d~~l~edL~lDSld~velv~~lE~~fgi~i 58 (86)
T PRK07639 29 TMRLNEDLYIDSVMMLQLIVYIEMDVKLCV 58 (86)
T ss_pred CCCcccccCCChHHHHHHHHHHHHHHCCcc
Confidence 337776 99999999999999999999999
No 444
>COG0236 AcpP Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=81.53 E-value=1.2 Score=35.07 Aligned_cols=27 Identities=15% Similarity=0.003 Sum_probs=25.0
Q ss_pred ccc-ccCCchhHHHHHHHHHhhhhceee
Q 042694 36 MHC-QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 36 ~Ff-~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
.|. ++|-|||-++.|...|.++||+.+
T Consensus 30 ~~~~dlg~DSld~veLi~~lE~~f~i~i 57 (80)
T COG0236 30 SFVEDLGLDSLDLVELVMALEEEFGIEI 57 (80)
T ss_pred ccccccCccHHHHHHHHHHHHHHHCCcC
Confidence 565 499999999999999999999998
No 445
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=81.36 E-value=15 Score=36.97 Aligned_cols=105 Identities=13% Similarity=0.077 Sum_probs=61.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcch-hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE-LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~-~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
++|-|.|+ |++|..++..|+..+.. .|+++|.. ....-+ ..+. ........ ..+.+.-. .+++.
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~--~VvlvDi~~~l~~g~-a~d~-~~~~~~~~---~~~~i~~t------~d~~~- 66 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA--DLVLLDVVEGIPQGK-ALDM-YEASPVGG---FDTKVTGT------NNYAD- 66 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC--eEEEEeCCCChhHHH-HHhh-hhhhhccC---CCcEEEec------CCHHH-
Confidence 47899996 99999999999876542 47776641 111100 0000 00000000 01111110 23444
Q ss_pred hcCccEEEEcCCCCCc-hhhHHHHHHHhchHHHHHHHHHHHc
Q 042694 190 AKEVDVIVNSAANTTF-DERYDIAIDINTRGPCRLMEFAKQC 230 (554)
Q Consensus 190 ~~~vdiViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~la~~~ 230 (554)
++++|+||-+|+...- .++..++...|+.-.+++++...+.
T Consensus 67 ~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~ 108 (305)
T TIGR01763 67 TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH 108 (305)
T ss_pred hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999997543 3455578889999999998877664
No 446
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=81.29 E-value=2.9 Score=41.47 Aligned_cols=36 Identities=36% Similarity=0.480 Sum_probs=29.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE 146 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~ 146 (554)
.++++|+|+|+ |-+|+.++..|...+ +.+|+++++.
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g--~~~V~v~~R~ 156 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLG--VAEITIVNRT 156 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEEeCC
Confidence 46789999997 899999999999765 3477777653
No 447
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=81.27 E-value=12 Score=36.47 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=59.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|+|||.|||+ =|+.|++.|.+.+. | ++.+..+.-..+... ....+.++.|-+.+. +.+..++
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v--~~sv~t~~g~~~~~~--------~~~~~~v~~G~lg~~------~~l~~~l 62 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-V--IVSVATSYGGELLKP--------ELPGLEVRVGRLGDE------EGLAEFL 62 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-E--EEEEEhhhhHhhhcc--------ccCCceEEECCCCCH------HHHHHHH
Confidence 6899999999 59999999998775 3 222222211122111 123456678877554 6666666
Q ss_pred c--CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCce
Q 042694 191 K--EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKL 235 (554)
Q Consensus 191 ~--~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~ 235 (554)
+ +++.||... .||.. .-++++.++|+++ ++.-
T Consensus 63 ~~~~i~~vIDAT------HPfA~------~is~na~~a~~~~-~ipy 96 (249)
T PF02571_consen 63 RENGIDAVIDAT------HPFAA------EISQNAIEACREL-GIPY 96 (249)
T ss_pred HhCCCcEEEECC------CchHH------HHHHHHHHHHhhc-Ccce
Confidence 4 899999963 23333 2367888999885 6543
No 448
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=80.85 E-value=9.2 Score=39.56 Aligned_cols=43 Identities=19% Similarity=0.359 Sum_probs=28.6
Q ss_pred CcEEEEecccccccHHHHHHHHhhCC-CccEEEEEc-chhHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVP-DVGKIFIIN-AELFKCLKQT 154 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~-~V~~i~~~~-~~~~~~l~~~ 154 (554)
+|+|.|.|+||.||+.-++-+.+ .+ .. +|..+. ....+++.+.
T Consensus 1 mk~VaILGsTGSIG~~tL~vi~~-~p~~f-~VvaLaa~~n~~~l~~q 45 (385)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRR-NPDRF-RVVALSAGKNVELLAEQ 45 (385)
T ss_pred CceEEEEcCChHHHHHHHHHHHh-Ccccc-EEEEEEcCCCHHHHHHH
Confidence 47899999999999998877765 34 34 555443 3334444443
No 449
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=80.60 E-value=4.8 Score=36.31 Aligned_cols=59 Identities=20% Similarity=0.307 Sum_probs=40.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++||+|+|.|.++.+|+-|...|++++..| .... -.. .+++
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atV---t~~h-----------------------------~~T-------~~l~ 74 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATV---TICH-----------------------------SKT-------KNLQ 74 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT-EE---EEE------------------------------TTS-------SSHH
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCCeE---Eecc-----------------------------CCC-------Cccc
Confidence 579999999999999999999999876433 2211 111 3456
Q ss_pred HHhcCccEEEEcCCCCCc
Q 042694 188 VIAKEVDVIVNSAANTTF 205 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~ 205 (554)
+..++.|+||-+++..++
T Consensus 75 ~~~~~ADIVVsa~G~~~~ 92 (160)
T PF02882_consen 75 EITRRADIVVSAVGKPNL 92 (160)
T ss_dssp HHHTTSSEEEE-SSSTT-
T ss_pred ceeeeccEEeeeeccccc
Confidence 677899999999988666
No 450
>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.
Probab=80.50 E-value=14 Score=39.01 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=64.4
Q ss_pred EEEEecccccccHHHHHHHHhhCCCc---cEEEEEcchhH-------------------------HHHHHHcCCchhhhc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDV---GKIFIINAELF-------------------------KCLKQTYGKSYQAFM 163 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V---~~i~~~~~~~~-------------------------~~l~~~~~~~~~~~~ 163 (554)
+|||.|+ |-+|..+++.|...|-.. ++|.++|.... +++++.. .
T Consensus 1 kVlvVGa-GGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lN-------p 72 (435)
T cd01490 1 KVFLVGA-GAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMN-------P 72 (435)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHC-------C
Confidence 4899997 559999999998865310 67887653211 1111111 1
Q ss_pred cCcEEEEEccCCCCCCCCCHHHH-HHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeec
Q 042694 164 LSKLVPAVGNVCENNLGLEEDLA-DVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTA 242 (554)
Q Consensus 164 ~~kv~~v~GDl~~~~lGLs~~~~-~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~ 242 (554)
.-+++.+...+.... ++.+ ....++.|+|+.+.-. +..-..+-+.|... -++++...|.
T Consensus 73 ~v~I~a~~~~v~~~~----~~~~~~~f~~~~DvVi~alDn--------------~~aR~~vn~~C~~~--~iPli~~gt~ 132 (435)
T cd01490 73 DLKITALQNRVGPET----EHIFNDEFWEKLDGVANALDN--------------VDARMYVDRRCVYY--RKPLLESGTL 132 (435)
T ss_pred CCEEEEEecccChhh----hhhhhHHHhcCCCEEEECCCC--------------HHHHHHHHHHHHHh--CCCEEEEecc
Confidence 235666666654321 1111 3455789999987433 22233466677763 4689999888
Q ss_pred eecccc
Q 042694 243 YVNGQR 248 (554)
Q Consensus 243 ~v~~~~ 248 (554)
+..|..
T Consensus 133 G~~G~v 138 (435)
T cd01490 133 GTKGNT 138 (435)
T ss_pred cceeEE
Confidence 777764
No 451
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=80.29 E-value=11 Score=36.46 Aligned_cols=35 Identities=20% Similarity=0.417 Sum_probs=27.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhC-CCccEEEEEcc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTV-PDVGKIFIINA 145 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~-~~V~~i~~~~~ 145 (554)
+++|.|.| +|.+|..++..|++.+ ..+..+++.++
T Consensus 4 ~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~ 39 (245)
T PRK07634 4 KHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNR 39 (245)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECC
Confidence 46899998 5999999999999865 34555776654
No 452
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=80.17 E-value=44 Score=30.00 Aligned_cols=97 Identities=15% Similarity=0.094 Sum_probs=57.5
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
.+|+|-||-|-||+..++.+..+++-|..|-+..++ ..+--+.|.+|-+-. |.-+.+.
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe----------------~Ad~sI~V~~~~swt------EQe~~v~ 61 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE----------------QADSSILVDGNKSWT------EQEQSVL 61 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc----------------cccceEEecCCcchh------HHHHHHH
Confidence 479999999999999999999888766554443322 112223455654432 2222211
Q ss_pred ---------cCccEEEEcCCCC--------CchhhHHHHHHHhchHHHHHHHHHHH
Q 042694 191 ---------KEVDVIVNSAANT--------TFDERYDIAIDINTRGPCRLMEFAKQ 229 (554)
Q Consensus 191 ---------~~vdiViH~AA~v--------~~~~~~~~~~~~Nv~gt~~ll~la~~ 229 (554)
+++|.||-.|+-- .+..+.+.+++-.|....--.++|.+
T Consensus 62 ~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~ 117 (236)
T KOG4022|consen 62 EQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATT 117 (236)
T ss_pred HHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHh
Confidence 3799999987631 12334445555555554444555554
No 453
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=80.02 E-value=3.2 Score=35.83 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=25.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEE
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFI 142 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~ 142 (554)
..+|-|.|+ |=+|.+|.+.|.+.++.|..||.
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~s 41 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYS 41 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEESS
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEe
Confidence 468999997 99999999999998876644444
No 454
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=79.45 E-value=15 Score=36.23 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=24.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
++|.|.| .|.+|+.+++.|++..+++.-+.+.+.
T Consensus 2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~ 35 (265)
T PRK13304 2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDR 35 (265)
T ss_pred CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECC
Confidence 5799999 599999999999875335533445554
No 455
>TIGR00517 acyl_carrier acyl carrier protein. S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site.
Probab=79.41 E-value=1.6 Score=33.84 Aligned_cols=29 Identities=14% Similarity=0.109 Sum_probs=26.2
Q ss_pred ccccc-ccCCchhHHHHHHHHHhhhhceee
Q 042694 34 SIMHC-QGGGKTTRSSGVSSALKERSTVTD 62 (554)
Q Consensus 34 ~~~Ff-~~GG~Sl~a~~l~~~l~~~~~v~~ 62 (554)
+.+|+ ++|-|||..+.|...|.++||+.+
T Consensus 26 ~~~l~~dlglDSl~~veli~~lE~~f~i~i 55 (77)
T TIGR00517 26 DASFVEDLGADSLDTVELVMALEEEFDIEI 55 (77)
T ss_pred CcchhhhcCCcHHHHHHHHHHHHHHHCCCC
Confidence 34776 599999999999999999999998
No 456
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=79.40 E-value=4.9 Score=40.42 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=27.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
..+.+|+|+||+|.+|..+++.+...+. +|+++.
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~---~v~~~~ 194 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKALGA---RVIAVT 194 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---eEEEEe
Confidence 4578999999999999999999987664 455443
No 457
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=78.99 E-value=5.3 Score=37.53 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=27.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
.+||+|.|+|. |-+|+++++.|.+.|.+ |+..+.
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~---Vvv~D~ 59 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAK---LIVADI 59 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCE---EEEEcC
Confidence 57899999997 78999999999998764 444443
No 458
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=78.38 E-value=12 Score=41.06 Aligned_cols=84 Identities=11% Similarity=0.123 Sum_probs=52.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc--c--hhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN--A--ELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEE 183 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~--~--~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~ 183 (554)
++..+|+|.|. |-+|+.++..|+++|. .+|.+++ . ....|+.+. .+. .....+.+.+-.-|.+. .
T Consensus 127 qR~akVlVlG~-Gg~~s~lv~sL~~sG~--~~I~~vd~D~v~SNlnRIgEl-~e~-A~~~n~~v~v~~i~~~~------~ 195 (637)
T TIGR03693 127 SRNAKILAAGS-GDFLTKLVRSLIDSGF--PRFHAIVTDAEEHALDRIHEL-AEI-AEETDDALLVQEIDFAE------D 195 (637)
T ss_pred hhcccEEEEec-CchHHHHHHHHHhcCC--CcEEEEeccccchhhhHHHHH-HHH-HHHhCCCCceEeccCCc------c
Confidence 56789999995 5579999999999774 4676553 2 122322221 000 00122344444444433 3
Q ss_pred HHHHHHhcCccEEEEcCCC
Q 042694 184 DLADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 184 ~~~~~l~~~vdiViH~AA~ 202 (554)
+++..++++.|+|++.+-.
T Consensus 196 ~dl~ev~~~~DiVi~vsDd 214 (637)
T TIGR03693 196 QHLHEAFEPADWVLYVSDN 214 (637)
T ss_pred hhHHHhhcCCcEEEEECCC
Confidence 8888899999999998764
No 459
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=78.37 E-value=7.9 Score=39.91 Aligned_cols=44 Identities=11% Similarity=0.270 Sum_probs=28.3
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEc-chhHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN-AELFKCLKQT 154 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~-~~~~~~l~~~ 154 (554)
+|+|.|.|+||.||+..++-+.+.-... +|..+. ....+.+.+.
T Consensus 1 Mk~i~IlGsTGSIG~qtL~Vi~~~~~~f-~v~~Laa~~n~~~L~~q 45 (389)
T TIGR00243 1 MKQIVILGSTGSIGKSTLDVVRHNPDHF-QVVALSAGKNVALMVEQ 45 (389)
T ss_pred CceEEEEecChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHH
Confidence 3789999999999999988765522234 555443 3334444443
No 460
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=78.28 E-value=6.7 Score=38.70 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=26.7
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
.++++|+|+|+ |-+|+.++..|++.+. +|++.++
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~---~v~v~~R 148 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADC---NVIIANR 148 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCC---EEEEEeC
Confidence 35789999998 7899999999998653 5555543
No 461
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=77.78 E-value=6.5 Score=41.44 Aligned_cols=77 Identities=16% Similarity=0.286 Sum_probs=49.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+.+++|+|.|+ |=+|+.++..|...|. .+|++.++.. ++...-... .. ...++ . -+++.
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~-~ra~~La~~-----~~-~~~~~-----~------~~~l~ 237 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTI-EKAQKITSA-----FR-NASAH-----Y------LSELP 237 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCH-HHHHHHHHH-----hc-CCeEe-----c------HHHHH
Confidence 57899999997 7799999999987654 5788776542 333221110 00 01111 1 14556
Q ss_pred HHhcCccEEEEcCCCCCc
Q 042694 188 VIAKEVDVIVNSAANTTF 205 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~ 205 (554)
..+.++|+||+|.+..++
T Consensus 238 ~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 238 QLIKKADIIIAAVNVLEY 255 (414)
T ss_pred HHhccCCEEEECcCCCCe
Confidence 667899999999987655
No 462
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=77.71 E-value=20 Score=30.05 Aligned_cols=98 Identities=18% Similarity=0.320 Sum_probs=57.1
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+|.|.|+ |..|+..++.+.+..+++.-+.+.+... .+...+..+ +. ... +++++
T Consensus 2 ~v~iiG~-G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~----------~~-~~~------------~~~~l 57 (120)
T PF01408_consen 2 RVGIIGA-GSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYG----------IP-VYT------------DLEEL 57 (120)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTT----------SE-EES------------SHHHH
T ss_pred EEEEECC-cHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhc----------cc-chh------------HHHHH
Confidence 6899997 8889999999998877773333444321 222222222 11 222 23444
Q ss_pred hc--CccEEEEcCCCCCchhhHHHHHH------------HhchHHHHHHHHHHHcCCCc
Q 042694 190 AK--EVDVIVNSAANTTFDERYDIAID------------INTRGPCRLMEFAKQCNKLK 234 (554)
Q Consensus 190 ~~--~vdiViH~AA~v~~~~~~~~~~~------------~Nv~gt~~ll~la~~~~~~k 234 (554)
.+ ++|+|+=+...-...+....+.+ .|....++++++|++. ++.
T Consensus 58 l~~~~~D~V~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~~~~~l~~~a~~~-~~~ 115 (120)
T PF01408_consen 58 LADEDVDAVIIATPPSSHAEIAKKALEAGKHVLVEKPLALTLEEAEELVEAAKEK-GVK 115 (120)
T ss_dssp HHHTTESEEEEESSGGGHHHHHHHHHHTTSEEEEESSSSSSHHHHHHHHHHHHHH-TSC
T ss_pred HHhhcCCEEEEecCCcchHHHHHHHHHcCCEEEEEcCCcCCHHHHHHHHHHHHHh-CCE
Confidence 44 79999988765333232233332 2566777888888874 443
No 463
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=76.83 E-value=7.8 Score=40.84 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=29.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc-chhHHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN-AELFKCLKQ 153 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~-~~~~~~l~~ 153 (554)
...|+|.|.|+||-||+..++-+.+..... +|..+. ....+.+.+
T Consensus 55 ~~~KkI~ILGSTGSIGtqtLdVI~~~pd~f-~vvaLaag~Ni~lL~~ 100 (454)
T PLN02696 55 DGPKPISLLGSTGSIGTQTLDIVAENPDKF-KVVALAAGSNVTLLAD 100 (454)
T ss_pred CCccEEEEecCCcHhhHHHHHHHHhCcccc-EEEEEECCCCHHHHHH
Confidence 345899999999999999998877632233 444442 333444443
No 464
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=76.73 E-value=9.5 Score=38.70 Aligned_cols=85 Identities=19% Similarity=0.228 Sum_probs=45.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
++|.|.|+ |-+|+.++..++..|.+| .+|-.+....++.+.............+.. .++. ..++... .+++...
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V-~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~-~~~i~~~-~~l~~av 81 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDV-VAWDPAPGAEAALRANVANAWPALERQGLA--PGAS-PARLRFV-ATIEACV 81 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCC--hhhH-Hhhceec-CCHHHHh
Confidence 67999985 999999999999988876 555444333333322111100100001100 1110 0011111 2455667
Q ss_pred cCccEEEEcCC
Q 042694 191 KEVDVIVNSAA 201 (554)
Q Consensus 191 ~~vdiViH~AA 201 (554)
+++|.|+-+..
T Consensus 82 ~~aDlViEavp 92 (321)
T PRK07066 82 ADADFIQESAP 92 (321)
T ss_pred cCCCEEEECCc
Confidence 89999999864
No 465
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional
Probab=76.47 E-value=1.3 Score=50.58 Aligned_cols=73 Identities=19% Similarity=0.137 Sum_probs=47.5
Q ss_pred eccceeeeeecCCCcccccchhhHHHHHHHHHHHHhcccCC-----CCCeEEEeeCCCCCcccHHHHHHHHHhHhccC
Q 042694 349 YGKGQLTGFLVDPNGILDVVPADMVVNATLAAIAQHGMIQK-----PDINVYQIASSVVNPLVFQDLARLLHEHYSAS 421 (554)
Q Consensus 349 ~~~G~~~~~~~~~~~~~d~vpVD~va~aii~~~~~~~~~~~-----~~~~vyn~~~~~~~~it~~e~~~~~~~~~~~~ 421 (554)
.+.|.++-+|..-.....++|+|...++-+.+.-.....+. .....--++.|.++.+-|+-+.+.+..++|+.
T Consensus 240 ~a~g~~~~~p~~~~~p~~~~p~d~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vwgm~~~ylm~yy~r~ 317 (1108)
T PTZ00374 240 VALGTVKHLPVGFRDPATVTPLDVALNTALLAVLLLCHGGLAECVECAAEMQLCGAPGDNSLVWGMVAEYLMDYYGRF 317 (1108)
T ss_pred HhhhhhhcccccCCCCceeccHHHHHHHHHHHHHHHhcCChHHHhcchhhheeccCCccceeeHHHHHHHHHHHHhhh
Confidence 34677777766666667899999987765443322221110 11123345666679999999999999998874
No 466
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=76.37 E-value=7.4 Score=38.85 Aligned_cols=70 Identities=16% Similarity=0.230 Sum_probs=44.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
..+++|+|.|+ |-+|+.+++.|...+. +|++.++... ++..... .....+ ..+++.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~---~V~v~~R~~~-~~~~~~~--------~g~~~~-----------~~~~l~ 204 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGA---RVFVGARSSA-DLARITE--------MGLIPF-----------PLNKLE 204 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCC---EEEEEeCCHH-HHHHHHH--------CCCeee-----------cHHHHH
Confidence 46899999997 8899999999987664 5665554321 1111110 011111 124566
Q ss_pred HHhcCccEEEEcCC
Q 042694 188 VIAKEVDVIVNSAA 201 (554)
Q Consensus 188 ~l~~~vdiViH~AA 201 (554)
.+.++.|+||++..
T Consensus 205 ~~l~~aDiVint~P 218 (287)
T TIGR02853 205 EKVAEIDIVINTIP 218 (287)
T ss_pred HHhccCCEEEECCC
Confidence 67789999999764
No 467
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=76.26 E-value=6.8 Score=39.29 Aligned_cols=69 Identities=17% Similarity=0.149 Sum_probs=43.0
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADV 188 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~ 188 (554)
.+++|+|.|+ |-+|+.++..|.+.+. +|+..++....+.+... . ...++ + .+++..
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga---~V~v~~r~~~~~~~~~~-------~--G~~~~--~---------~~~l~~ 206 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGA---NVTVGARKSAHLARITE-------M--GLSPF--H---------LSELAE 206 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHH-------c--CCeee--c---------HHHHHH
Confidence 5899999996 8899999999988664 55555543222111100 0 11111 1 134566
Q ss_pred HhcCccEEEEcCC
Q 042694 189 IAKEVDVIVNSAA 201 (554)
Q Consensus 189 l~~~vdiViH~AA 201 (554)
...+.|+||++..
T Consensus 207 ~l~~aDiVI~t~p 219 (296)
T PRK08306 207 EVGKIDIIFNTIP 219 (296)
T ss_pred HhCCCCEEEECCC
Confidence 6789999999854
No 468
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=76.22 E-value=12 Score=35.13 Aligned_cols=35 Identities=26% Similarity=0.360 Sum_probs=28.0
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE 146 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~ 146 (554)
.++++|+|.|| |=+|...++.|++.+. +|.++...
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga---~V~VIs~~ 42 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGA---HIVVISPE 42 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEcCC
Confidence 57899999997 8999999999999775 45555433
No 469
>PRK08655 prephenate dehydrogenase; Provisional
Probab=76.20 E-value=5.6 Score=42.30 Aligned_cols=27 Identities=22% Similarity=0.183 Sum_probs=23.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCc
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDV 137 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V 137 (554)
|+|.|.||+|-+|..++..|.+.+.+|
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V 27 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEV 27 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEE
Confidence 479999999999999999999877644
No 470
>PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase []. These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B ....
Probab=76.15 E-value=6.5 Score=41.84 Aligned_cols=74 Identities=19% Similarity=0.235 Sum_probs=45.5
Q ss_pred CcEEEEec-ccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHH-cCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 110 AKNFFVTG-ATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQT-YGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 110 ~~~VlITG-aTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~-~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
++.|++.| |||-|....++...+.+.. .+||.+... +...++.. ..+ ...++|+++.||+.+-.
T Consensus 187 ~~vVldVGAGrGpL~~~al~A~~~~~~a-~~VyAVEkn~~A~~~l~~~v~~n----~w~~~V~vi~~d~r~v~------- 254 (448)
T PF05185_consen 187 DKVVLDVGAGRGPLSMFALQAGARAGGA-VKVYAVEKNPNAVVTLQKRVNAN----GWGDKVTVIHGDMREVE------- 254 (448)
T ss_dssp T-EEEEES-TTSHHHHHHHHTTHHHCCE-SEEEEEESSTHHHHHHHHHHHHT----TTTTTEEEEES-TTTSC-------
T ss_pred ceEEEEeCCCccHHHHHHHHHHHHhCCC-eEEEEEcCCHhHHHHHHHHHHhc----CCCCeEEEEeCcccCCC-------
Confidence 56799998 4676666666665555533 499999643 23333222 111 14579999999998762
Q ss_pred HHHHhcCccEEEE
Q 042694 186 ADVIAKEVDVIVN 198 (554)
Q Consensus 186 ~~~l~~~vdiViH 198 (554)
+.+.+|+||.
T Consensus 255 ---lpekvDIIVS 264 (448)
T PF05185_consen 255 ---LPEKVDIIVS 264 (448)
T ss_dssp ---HSS-EEEEEE
T ss_pred ---CCCceeEEEE
Confidence 2348999998
No 471
>TIGR01408 Ube1 ubiquitin-activating enzyme E1. This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.
Probab=75.84 E-value=23 Score=41.80 Aligned_cols=117 Identities=17% Similarity=0.203 Sum_probs=70.0
Q ss_pred hhhhccCcEEEEecccccccHHHHHHHHhhCCC---ccEEEEEcchh-------------------------HHHHHHHc
Q 042694 104 IVKFLKAKNFFVTGATGFLAKVLIEKILRTVPD---VGKIFIINAEL-------------------------FKCLKQTY 155 (554)
Q Consensus 104 i~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~---V~~i~~~~~~~-------------------------~~~l~~~~ 155 (554)
.++.....+|||.|+ |-||..+++.|...|-. .++|.++|... .+++++..
T Consensus 413 ~Q~kL~~~kVlvvGa-GGlG~e~lknLal~Gv~~~~~G~i~IvD~D~Ve~SNLnRQfLf~~~dIGk~Ka~vaa~~l~~~N 491 (1008)
T TIGR01408 413 FQQKLQNLNIFLVGC-GAIGCEMLKNFALMGVGTGKKGMITVTDPDLIEKSNLNRQFLFRPHHIGKPKSYTAADATLKIN 491 (1008)
T ss_pred HHHHHhhCcEEEECC-ChHHHHHHHHHHHhCCCcCCCCeEEEECCCEecccccCcCcCCChhHcCcHHHHHHHHHHHHHC
Confidence 344566789999997 55999999999886531 15777664311 11111111
Q ss_pred CCchhhhccCcEEEEEccCCCCCCCCCHHHH-HHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCc
Q 042694 156 GKSYQAFMLSKLVPAVGNVCENNLGLEEDLA-DVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLK 234 (554)
Q Consensus 156 ~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~-~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k 234 (554)
+ .-+|+++...+.... +..+ ..+.++.|+|+.+.-. +..-..+-+.|... -+
T Consensus 492 p-------~v~I~~~~~~v~~~~----e~i~~~~f~~~~dvVi~alDn--------------~~aR~~vn~~c~~~--~i 544 (1008)
T TIGR01408 492 P-------QIKIDAHQNRVGPET----ETIFNDEFYEKLDVVINALDN--------------VEARRYVDSRCLAF--LK 544 (1008)
T ss_pred C-------CCEEEEEEeecChhh----hhhhhHHHhhCCCEEEECCCC--------------HHHHHHHHHHHHHc--CC
Confidence 1 225667766665320 1111 3456789999986432 22233466777763 46
Q ss_pred eEEEEeeceecccc
Q 042694 235 LFVQVSTAYVNGQR 248 (554)
Q Consensus 235 ~~v~vST~~v~~~~ 248 (554)
++++.+|.+-.|..
T Consensus 545 Pli~~gt~G~~G~v 558 (1008)
T TIGR01408 545 PLLESGTLGTKGNT 558 (1008)
T ss_pred CEEEEeccCceeeE
Confidence 89998888777663
No 472
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=75.73 E-value=10 Score=39.42 Aligned_cols=73 Identities=10% Similarity=0.196 Sum_probs=45.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.+.+|+|.|+ |=+|...++.|.+.|. +|++++... .+.+..... .. +..+..+ .+++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa---~V~v~d~~~~~~~~l~~~~g--------~~---v~~~~~~------~~~l 224 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGA---TVTILDINIDRLRQLDAEFG--------GR---IHTRYSN------AYEI 224 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcC--------ce---eEeccCC------HHHH
Confidence 4567999987 8899999999998764 456665431 222222221 11 1222222 3667
Q ss_pred HHHhcCccEEEEcCCC
Q 042694 187 DVIAKEVDVIVNSAAN 202 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~ 202 (554)
.....++|+||.++..
T Consensus 225 ~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 225 EDAVKRADLLIGAVLI 240 (370)
T ss_pred HHHHccCCEEEEcccc
Confidence 7777899999998743
No 473
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=75.59 E-value=6.5 Score=38.98 Aligned_cols=61 Identities=18% Similarity=0.299 Sum_probs=45.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+.|++|.|.|.+|.+|+-+...|++.+..| .+... .. .+.+
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gatV---tv~~s------------------------------~t------~~l~ 196 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNATV---TLTHS------------------------------RT------RNLA 196 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCCEE---EEECC------------------------------CC------CCHH
Confidence 479999999999999999999999887654 22111 00 1345
Q ss_pred HHhcCccEEEEcCCCCCchh
Q 042694 188 VIAKEVDVIVNSAANTTFDE 207 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~~~ 207 (554)
...+++|+||-+.+.-++..
T Consensus 197 ~~~~~ADIVI~avg~~~~v~ 216 (284)
T PRK14179 197 EVARKADILVVAIGRGHFVT 216 (284)
T ss_pred HHHhhCCEEEEecCccccCC
Confidence 66788999999998866643
No 474
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=75.51 E-value=20 Score=34.96 Aligned_cols=93 Identities=10% Similarity=0.107 Sum_probs=60.2
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+++|+|.|||+ =|+.|++.|.+.+.. -++++.... .. . ....+.+..|-+.+. +.+..+
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~~~g~~--v~~Svat~~-g~----~-------~~~~~~v~~G~l~~~------~~l~~~ 60 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALAAAGVD--IVLSLAGRT-GG----P-------ADLPGPVRVGGFGGA------EGLAAY 60 (248)
T ss_pred CceEEEEechH-HHHHHHHHHHhCCCe--EEEEEccCC-CC----c-------ccCCceEEECCCCCH------HHHHHH
Confidence 46899999999 599999999877643 355554331 11 1 123455677777544 666666
Q ss_pred hc--CccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceE
Q 042694 190 AK--EVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLF 236 (554)
Q Consensus 190 ~~--~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~ 236 (554)
++ ++++||+.. .||.. .-++++.++|++. ++.-+
T Consensus 61 l~~~~i~~VIDAT------HPfA~------~is~~a~~ac~~~-~ipyi 96 (248)
T PRK08057 61 LREEGIDLVIDAT------HPYAA------QISANAAAACRAL-GIPYL 96 (248)
T ss_pred HHHCCCCEEEECC------CccHH------HHHHHHHHHHHHh-CCcEE
Confidence 64 899999963 23332 2366788999985 66533
No 475
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=75.41 E-value=6.3 Score=39.38 Aligned_cols=59 Identities=17% Similarity=0.352 Sum_probs=44.4
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+.||+|.+.|.+|.+|+-+...|++.+..| .+.++. . .+.+
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatV---tv~~~~------------------------------t------~~l~ 197 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSV---TVVHSR------------------------------S------TDAK 197 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEE---EEECCC------------------------------C------CCHH
Confidence 479999999999999999999999987654 222210 0 1355
Q ss_pred HHhcCccEEEEcCCCCCc
Q 042694 188 VIAKEVDVIVNSAANTTF 205 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~ 205 (554)
++.+++|+||-+.+...+
T Consensus 198 e~~~~ADIVIsavg~~~~ 215 (301)
T PRK14194 198 ALCRQADIVVAAVGRPRL 215 (301)
T ss_pred HHHhcCCEEEEecCChhc
Confidence 667889999999887554
No 476
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=74.95 E-value=1.2e+02 Score=32.31 Aligned_cols=94 Identities=18% Similarity=0.232 Sum_probs=60.8
Q ss_pred hhccCcEEEEeccc---ccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCC
Q 042694 106 KFLKAKNFFVTGAT---GFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLE 182 (554)
Q Consensus 106 ~~~~~~~VlITGaT---GFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs 182 (554)
.+++.++|.|.|+| |-+|..+++.|++.++. .+||.++...- .+.|--.-
T Consensus 3 ~l~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~-g~v~~Vnp~~~--------------------~i~G~~~~------ 55 (447)
T TIGR02717 3 HLFNPKSVAVIGASRDPGKVGYAIMKNLIEGGYK-GKIYPVNPKAG--------------------EILGVKAY------ 55 (447)
T ss_pred cccCCCEEEEEccCCCCCchHHHHHHHHHhCCCC-CcEEEECCCCC--------------------ccCCcccc------
Confidence 35788999999998 77899999999987754 36776663210 01111011
Q ss_pred HHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEeece
Q 042694 183 EDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVSTAY 243 (554)
Q Consensus 183 ~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST~~ 243 (554)
..++.+.+.+|.++-+... ..+..+++.|.+ .+++.++.+|+-+
T Consensus 56 -~sl~~lp~~~Dlavi~vp~---------------~~~~~~l~e~~~-~gv~~~vi~s~gf 99 (447)
T TIGR02717 56 -PSVLEIPDPVDLAVIVVPA---------------KYVPQVVEECGE-KGVKGAVVITAGF 99 (447)
T ss_pred -CCHHHCCCCCCEEEEecCH---------------HHHHHHHHHHHh-cCCCEEEEECCCc
Confidence 2334445678888765432 234567777777 5899988888753
No 477
>PRK06849 hypothetical protein; Provisional
Probab=74.95 E-value=10 Score=39.65 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=28.6
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE 146 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~ 146 (554)
++|+|||||+....|-.+++.|-+.|. +|+.++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~---~Vi~~d~~ 37 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH---TVILADSL 37 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCC
Confidence 468999999999999999999998775 55655543
No 478
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=74.20 E-value=7.9 Score=39.03 Aligned_cols=40 Identities=15% Similarity=0.201 Sum_probs=27.6
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLK 152 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~ 152 (554)
++|.|.|+ |.+|..++..|++.+.+| .++-.+.+..++++
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~~~g~~V-~~~d~~~~~~~~~~ 44 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFARKGLQV-VLIDVMEGALERAR 44 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHHhCCCeE-EEEECCHHHHHHHH
Confidence 57999985 999999999999887654 33333333344443
No 479
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=74.17 E-value=28 Score=34.34 Aligned_cols=27 Identities=19% Similarity=0.407 Sum_probs=21.4
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCc
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDV 137 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V 137 (554)
.++|.|.| .|.+|+.+++.|.+..+++
T Consensus 6 ~irIGIIG-~G~IG~~~a~~L~~~~~~~ 32 (271)
T PRK13302 6 ELRVAIAG-LGAIGKAIAQALDRGLPGL 32 (271)
T ss_pred eeEEEEEC-ccHHHHHHHHHHHhcCCCe
Confidence 46899998 5999999999998633455
No 480
>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]
Probab=73.99 E-value=7.8 Score=39.36 Aligned_cols=44 Identities=16% Similarity=0.292 Sum_probs=29.1
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEE-cchhHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII-NAELFKCLKQT 154 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~-~~~~~~~l~~~ 154 (554)
+|++.|.|+||.||..-+.-+-+..... +|..+ .....+.+.+.
T Consensus 1 ~k~i~iLGSTGSIG~qtLdVi~~~p~~f-~vval~ag~n~~~l~~q 45 (385)
T COG0743 1 MKKLTILGSTGSIGTQTLDVIRRNPDKF-EVVALAAGKNVELLAEQ 45 (385)
T ss_pred CceEEEEecCCchhHHHHHHHHhCCCcE-EEEEEecCCcHHHHHHH
Confidence 4789999999999999988776643333 55544 23334444443
No 481
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=73.89 E-value=11 Score=35.48 Aligned_cols=70 Identities=16% Similarity=0.145 Sum_probs=46.2
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|++|+|.|| |-+|..-++.|++.+.. |.+++...-+.+.+.. ...++..+.++... ++
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~---VtVvsp~~~~~l~~l~-------~~~~i~~~~~~~~~-------~d-- 66 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQ---LRVIAEELESELTLLA-------EQGGITWLARCFDA-------DI-- 66 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCE---EEEEcCCCCHHHHHHH-------HcCCEEEEeCCCCH-------HH--
Confidence 56889999996 88999999999998764 4444433222332221 12378888888653 22
Q ss_pred HHhcCccEEEEc
Q 042694 188 VIAKEVDVIVNS 199 (554)
Q Consensus 188 ~l~~~vdiViH~ 199 (554)
+++.+.||-+
T Consensus 67 --l~~~~lVi~a 76 (205)
T TIGR01470 67 --LEGAFLVIAA 76 (205)
T ss_pred --hCCcEEEEEC
Confidence 3678888854
No 482
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=73.51 E-value=12 Score=39.11 Aligned_cols=76 Identities=24% Similarity=0.258 Sum_probs=51.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
+++++|||.|| |=+|.-++..|.+.+ +++|++.++. +++..+-... +. ++...- +++.
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g--~~~i~IaNRT-~erA~~La~~---------~~---~~~~~l------~el~ 233 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKG--VKKITIANRT-LERAEELAKK---------LG---AEAVAL------EELL 233 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCC--CCEEEEEcCC-HHHHHHHHHH---------hC---CeeecH------HHHH
Confidence 57899999996 889999999999864 5688888754 3333322111 10 222222 5666
Q ss_pred HHhcCccEEEEcCCCCCc
Q 042694 188 VIAKEVDVIVNSAANTTF 205 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~ 205 (554)
....++|+||-+.|..++
T Consensus 234 ~~l~~~DvVissTsa~~~ 251 (414)
T COG0373 234 EALAEADVVISSTSAPHP 251 (414)
T ss_pred HhhhhCCEEEEecCCCcc
Confidence 667899999999887655
No 483
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=73.50 E-value=7.4 Score=38.61 Aligned_cols=59 Identities=15% Similarity=0.268 Sum_probs=43.6
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|++|.|.|.++.+|+-|...|++.+-.| .+... .. .++.
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~atV---t~~hs------------------------------~t------~~l~ 196 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATV---TICHS------------------------------KT------RDLA 196 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEE---EEecC------------------------------CC------CCHH
Confidence 479999999999999999999999866433 22110 11 3455
Q ss_pred HHhcCccEEEEcCCCCCc
Q 042694 188 VIAKEVDVIVNSAANTTF 205 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~ 205 (554)
...++.|+||-+++..++
T Consensus 197 ~~~~~ADIVV~avG~~~~ 214 (285)
T PRK14189 197 AHTRQADIVVAAVGKRNV 214 (285)
T ss_pred HHhhhCCEEEEcCCCcCc
Confidence 667899999999886555
No 484
>COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis]
Probab=73.37 E-value=13 Score=34.68 Aligned_cols=78 Identities=17% Similarity=0.307 Sum_probs=54.2
Q ss_pred ccCcEEEEeccc-ccccHHHHHHHHhhCCCccEEEEEc--chhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 108 LKAKNFFVTGAT-GFLAKVLIEKILRTVPDVGKIFIIN--AELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 108 ~~~~~VlITGaT-GFlG~~Ll~~LL~~~~~V~~i~~~~--~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
-.|.+||-.||+ |---+|+.. .... ..||++. ...+..|..... ...++.++-+|-+.| +
T Consensus 75 ~~g~~VLYLGAasGTTvSHVSD-Iv~~----G~iYaVEfs~R~~reLl~~a~------~R~Ni~PIL~DA~~P------~ 137 (231)
T COG1889 75 KEGSKVLYLGAASGTTVSHVSD-IVGE----GRIYAVEFSPRPMRELLDVAE------KRPNIIPILEDARKP------E 137 (231)
T ss_pred CCCCEEEEeeccCCCcHhHHHh-ccCC----CcEEEEEecchhHHHHHHHHH------hCCCceeeecccCCc------H
Confidence 357889988864 555555543 3322 3689875 333433333222 357899999999999 9
Q ss_pred HHHHHhcCccEEEEcCCC
Q 042694 185 LADVIAKEVDVIVNSAAN 202 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~ 202 (554)
.+..+.+.||+||-=-|.
T Consensus 138 ~Y~~~Ve~VDviy~DVAQ 155 (231)
T COG1889 138 KYRHLVEKVDVIYQDVAQ 155 (231)
T ss_pred HhhhhcccccEEEEecCC
Confidence 999999999999987665
No 485
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=73.34 E-value=13 Score=37.50 Aligned_cols=74 Identities=23% Similarity=0.315 Sum_probs=46.5
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh--HHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL--FKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDL 185 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~--~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~ 185 (554)
..+++|+|.|+ |-+|..+++.|...+ ..+|++.++.. ...+.+..+ . .++. . ++
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g--~~~V~v~~r~~~ra~~la~~~g--------~--~~~~-----~------~~ 231 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKG--VAEITIANRTYERAEELAKELG--------G--NAVP-----L------DE 231 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHcC--------C--eEEe-----H------HH
Confidence 46899999997 999999998887633 44677666432 122222221 1 1111 1 34
Q ss_pred HHHHhcCccEEEEcCCCCCc
Q 042694 186 ADVIAKEVDVIVNSAANTTF 205 (554)
Q Consensus 186 ~~~l~~~vdiViH~AA~v~~ 205 (554)
+.....++|+||-+.+....
T Consensus 232 ~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 232 LLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHHHhcCCEEEECCCCCch
Confidence 45556789999999886443
No 486
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=73.32 E-value=21 Score=35.89 Aligned_cols=112 Identities=13% Similarity=0.059 Sum_probs=67.0
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|.|.|+ |.+|..++..|+..+ -+..++++|.. ..+............ ..+.....+ .+++ -+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~-~~~el~l~D~~~~~~~g~~~DL~~~~~~--~~~~~i~~~-----------~~~~-~l 64 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKG-LASELVLVDVNEEKAKGDALDLSHASAF--LATGTIVRG-----------GDYA-DA 64 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHHHHHhHHHhccc--cCCCeEEEC-----------CCHH-Hh
Confidence 457786 889999999888754 34578887742 122222211110000 011122211 1233 34
Q ss_pred cCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEEee
Q 042694 191 KEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQVST 241 (554)
Q Consensus 191 ~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~vST 241 (554)
+++|+||-+|+..+ -.++.......|+.-.+++.+..++. ..+.++.+=|
T Consensus 65 ~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~-~p~~~viv~s 115 (300)
T cd00300 65 ADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY-GPDAIILVVS 115 (300)
T ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence 79999999999743 33456788889999999999998875 4555544444
No 487
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=73.30 E-value=23 Score=35.49 Aligned_cols=102 Identities=13% Similarity=0.016 Sum_probs=57.3
Q ss_pred EEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCch--hhhccCcEEEEEccCCCCCCCCCHHHHHHHh
Q 042694 113 FFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSY--QAFMLSKLVPAVGNVCENNLGLEEDLADVIA 190 (554)
Q Consensus 113 VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~--~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~ 190 (554)
|.|.|| |.+|..+...|...+.. .|+++|... ++++....... .........+.. . .+++. +
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e-~~~~g~~~dl~~~~~~~~~~~~I~~-----t------~d~~~-l 64 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVE-GLPQGKALDISQAAPILGSDTKVTG-----T------NDYED-I 64 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCC-cHHHHHHHHHHHhhhhcCCCeEEEE-----c------CCHHH-h
Confidence 468898 99999999888765432 677776421 11111100000 000001111110 0 22344 4
Q ss_pred cCccEEEEcCCCCC-chhhHHHHHHHhchHHHHHHHHHHHc
Q 042694 191 KEVDVIVNSAANTT-FDERYDIAIDINTRGPCRLMEFAKQC 230 (554)
Q Consensus 191 ~~vdiViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~la~~~ 230 (554)
+++|+||-+++... ..+...+....|+.-.+.+++...+.
T Consensus 65 ~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~ 105 (300)
T cd01339 65 AGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY 105 (300)
T ss_pred CCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999998643 33444566777888888888877764
No 488
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=73.23 E-value=8.3 Score=38.44 Aligned_cols=38 Identities=29% Similarity=0.297 Sum_probs=29.7
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKC 150 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~ 150 (554)
++|.|.|+ |.+|..+...|+..|++| .+|..+.+..++
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V-~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDV-LVFETTEELATA 43 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEE-EEEECCHHHHHH
Confidence 47999986 999999999999988876 666665444333
No 489
>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]
Probab=72.76 E-value=19 Score=37.98 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=64.2
Q ss_pred hccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHH--HHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHH
Q 042694 107 FLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFK--CLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEED 184 (554)
Q Consensus 107 ~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~--~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~ 184 (554)
..++.+|||.||.| ||..|++-|+..+. +.|.+++....+ .|-++. -+-.-|+.++.--...+
T Consensus 9 ai~~~riLvVGaGG-IGCELLKnLal~gf--~~IhiIDlDTIDlSNLNRQF------------LFrkkhVgqsKA~vA~~ 73 (603)
T KOG2013|consen 9 AIKSGRILVVGAGG-IGCELLKNLALTGF--EEIHIIDLDTIDLSNLNRQF------------LFRKKHVGQSKATVAAK 73 (603)
T ss_pred HhccCeEEEEecCc-ccHHHHHHHHHhcC--CeeEEEeccceeccchhhhh------------eeehhhcCchHHHHHHH
Confidence 34677999999855 99999999998764 466665532211 111111 01112333331111112
Q ss_pred HHHHHhcCccEEEEcCCCCCchhh------HHHHHH--HhchHHHHHHHHHHHcCCCceEEEEeeceecc
Q 042694 185 LADVIAKEVDVIVNSAANTTFDER------YDIAID--INTRGPCRLMEFAKQCNKLKLFVQVSTAYVNG 246 (554)
Q Consensus 185 ~~~~l~~~vdiViH~AA~v~~~~~------~~~~~~--~Nv~gt~~ll~la~~~~~~k~~v~vST~~v~~ 246 (554)
....+..+++++..+|....+..+ |+..+. -|..+-+.+-+.|... ++ ++|--.|++-.|
T Consensus 74 ~v~~Fnpn~~l~~yhanI~e~~fnv~ff~qfdiV~NaLDNlaAR~yVNr~C~~a-~v-PLIesGt~Gf~G 141 (603)
T KOG2013|consen 74 AVKQFNPNIKLVPYHANIKEPKFNVEFFRQFDIVLNALDNLAARRYVNRMCLAA-SV-PLIESGTGGFLG 141 (603)
T ss_pred HHHHhCCCCceEeccccccCcchHHHHHHHHHHHHHhhccHHHHHHHHHHHHhh-cC-CceecCcccccc
Confidence 233333467777777766554222 221111 2666666677777653 32 566555554444
No 490
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=72.75 E-value=53 Score=32.79 Aligned_cols=34 Identities=29% Similarity=0.364 Sum_probs=25.8
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIIN 144 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~ 144 (554)
.++.=|.|.|+ |-+|++++..|+|+|. .+|.+++
T Consensus 72 l~~syVVVVG~-GgVGSwv~nmL~RSG~--qKi~iVD 105 (430)
T KOG2018|consen 72 LTNSYVVVVGA-GGVGSWVANMLLRSGV--QKIRIVD 105 (430)
T ss_pred hcCcEEEEEec-CchhHHHHHHHHHhcC--ceEEEec
Confidence 34556899997 4599999999999875 4666554
No 491
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=72.74 E-value=32 Score=32.76 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=25.0
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHH
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLK 152 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~ 152 (554)
+|.|.| .|.||+.+++.+...--.++.++..|+. .++.+
T Consensus 2 ~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~-~ek~~ 40 (255)
T COG1712 2 KVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRD-EEKAK 40 (255)
T ss_pred eEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCC-HHHHH
Confidence 678888 5999999999887532245445555543 34443
No 492
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=72.14 E-value=12 Score=39.57 Aligned_cols=75 Identities=20% Similarity=0.282 Sum_probs=45.9
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
..+++|+|.|+ |-+|..++..|...+ +.+|++.+.. .++....... .. ++... .++..
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G--~~~V~v~~r~-~~ra~~la~~-----~g-------~~~~~------~~~~~ 237 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKG--VRKITVANRT-LERAEELAEE-----FG-------GEAIP------LDELP 237 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCC--CCeEEEEeCC-HHHHHHHHHH-----cC-------CcEee------HHHHH
Confidence 57899999986 999999999998655 3467766543 2232211110 00 11111 13445
Q ss_pred HHhcCccEEEEcCCCCC
Q 042694 188 VIAKEVDVIVNSAANTT 204 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~ 204 (554)
....++|+||.+.+...
T Consensus 238 ~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 238 EALAEADIVISSTGAPH 254 (423)
T ss_pred HHhccCCEEEECCCCCC
Confidence 55678999999977544
No 493
>COG0476 ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism]
Probab=71.47 E-value=52 Score=32.01 Aligned_cols=111 Identities=22% Similarity=0.233 Sum_probs=67.2
Q ss_pred hhhccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchh---------------------HH----HHHHHcCCch
Q 042694 105 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAEL---------------------FK----CLKQTYGKSY 159 (554)
Q Consensus 105 ~~~~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~---------------------~~----~l~~~~~~~~ 159 (554)
++..+..+|+|.| .|-+|...++.|...| |+++.+++... .+ .+++..
T Consensus 25 q~~l~~s~vlvvG-~GglG~~~~~~la~aG--vg~l~i~D~d~v~~snL~rq~~~~~~dig~~Ka~~a~~~l~~ln---- 97 (254)
T COG0476 25 QQKLKDSRVLVVG-AGGLGSPAAKYLALAG--VGKLTIVDFDTVELSNLQRQFLFTEADVGKPKAEVAAKALRKLN---- 97 (254)
T ss_pred HHHHhhCCEEEEe-cChhHHHHHHHHHHcC--CCeEEEEcCCcccccccCceeeecccccCCcHHHHHHHHHHHhC----
Confidence 5556677899999 5779999999999865 55666553211 01 111111
Q ss_pred hhhccCcEEEEEccCCCCCCCCCHHHHHHHhcCccEEEEcCCCCCchhhHHHHHHHhchHHHHHHHHHHHcCCCceEEEE
Q 042694 160 QAFMLSKLVPAVGNVCENNLGLEEDLADVIAKEVDVIVNSAANTTFDERYDIAIDINTRGPCRLMEFAKQCNKLKLFVQV 239 (554)
Q Consensus 160 ~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~~vdiViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~la~~~~~~k~~v~v 239 (554)
..-+++++...++ .+....+.+..|+|+++-.. | .++.++..+.. +.-+++++.
T Consensus 98 ---~~v~v~~~~~~l~-------~~~~~~~~~~~d~v~d~~dn--~-------------~~r~~iN~~~~-~~~~pli~~ 151 (254)
T COG0476 98 ---PLVEVVAYLERLD-------EENAEELIAQFDVVLDCTDN--F-------------ETRYLINDACV-KLGIPLVHG 151 (254)
T ss_pred ---CCCeEEEeecccC-------hhhHHHHhccCCEEEECCCC--H-------------HHHHHHHHHHH-HhCCCeEee
Confidence 1224444444433 35557888899999998543 3 24445544443 223688888
Q ss_pred eeceecccc
Q 042694 240 STAYVNGQR 248 (554)
Q Consensus 240 ST~~v~~~~ 248 (554)
++....|..
T Consensus 152 ~~~~~~g~~ 160 (254)
T COG0476 152 GAIGFEGQV 160 (254)
T ss_pred eeccceEEE
Confidence 887766653
No 494
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=71.41 E-value=33 Score=34.45 Aligned_cols=74 Identities=16% Similarity=0.199 Sum_probs=44.8
Q ss_pred cCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcch--hHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHH
Q 042694 109 KAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAE--LFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLA 186 (554)
Q Consensus 109 ~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~--~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~ 186 (554)
.|+.|-|+|+.| ||..-++.-..-|. +|+.++.. .-+.+-+..+.. .-.|.++. ++..
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~---rV~vis~~~~kkeea~~~LGAd-----------~fv~~~~d-----~d~~ 240 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGM---RVTVISTSSKKKEEAIKSLGAD-----------VFVDSTED-----PDIM 240 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCc---EEEEEeCCchhHHHHHHhcCcc-----------eeEEecCC-----HHHH
Confidence 689999999999 99877766666565 56666543 222222222221 11233422 2666
Q ss_pred HHHhcCccEEEEcCCC
Q 042694 187 DVIAKEVDVIVNSAAN 202 (554)
Q Consensus 187 ~~l~~~vdiViH~AA~ 202 (554)
+.+.+..|.++|++..
T Consensus 241 ~~~~~~~dg~~~~v~~ 256 (360)
T KOG0023|consen 241 KAIMKTTDGGIDTVSN 256 (360)
T ss_pred HHHHHhhcCcceeeee
Confidence 7777777888887763
No 495
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=71.37 E-value=3 Score=41.64 Aligned_cols=40 Identities=15% Similarity=0.219 Sum_probs=29.9
Q ss_pred cEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHH
Q 042694 111 KNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLK 152 (554)
Q Consensus 111 ~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~ 152 (554)
++|.|.|+ |.+|..+...|++.+++| .+|-.+....+++.
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V-~~~d~~~~~~~~~~ 41 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQT-TLVDIKQEQLESAQ 41 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcE-EEEeCCHHHHHHHH
Confidence 57999996 999999999999988876 55555444444443
No 496
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=71.20 E-value=5.1 Score=35.96 Aligned_cols=79 Identities=15% Similarity=0.186 Sum_probs=45.8
Q ss_pred EEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHHhc
Q 042694 112 NFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVIAK 191 (554)
Q Consensus 112 ~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l~~ 191 (554)
+|.|.|| |-.|..+...|.+++++| .+|..+.+..+.+++...... ....+. +...+.-. .++++..+
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V-~l~~~~~~~~~~i~~~~~n~~---~~~~~~-l~~~i~~t------~dl~~a~~ 68 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEV-TLWGRDEEQIEEINETRQNPK---YLPGIK-LPENIKAT------TDLEEALE 68 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEE-EEETSCHHHHHHHHHHTSETT---TSTTSB-EETTEEEE------SSHHHHHT
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEE-EEEeccHHHHHHHHHhCCCCC---CCCCcc-cCcccccc------cCHHHHhC
Confidence 5889986 889999999999988655 555555566677776554210 111110 11111111 44556778
Q ss_pred CccEEEEcCCC
Q 042694 192 EVDVIVNSAAN 202 (554)
Q Consensus 192 ~vdiViH~AA~ 202 (554)
+.|+|+-+-..
T Consensus 69 ~ad~IiiavPs 79 (157)
T PF01210_consen 69 DADIIIIAVPS 79 (157)
T ss_dssp T-SEEEE-S-G
T ss_pred cccEEEecccH
Confidence 99999976544
No 497
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=71.04 E-value=15 Score=38.16 Aligned_cols=68 Identities=18% Similarity=0.163 Sum_probs=44.9
Q ss_pred CcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHHHH
Q 042694 110 AKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLADVI 189 (554)
Q Consensus 110 ~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~~l 189 (554)
+++|+|.|| |.+|+-++....+.|. ++++++...-..... ..+ ..+.+|..++ +.+..+
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~---~v~~~d~~~~~pa~~---------~ad--~~~~~~~~D~------~~l~~~ 60 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGY---KVIVLDPDPDSPAAQ---------VAD--EVIVADYDDV------AALREL 60 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEeCCCCCchhH---------hCc--eEEecCCCCH------HHHHHH
Confidence 478999997 8999999999988775 455555321110000 111 2355777665 888889
Q ss_pred hcCccEEEE
Q 042694 190 AKEVDVIVN 198 (554)
Q Consensus 190 ~~~vdiViH 198 (554)
++.+|+|..
T Consensus 61 a~~~dvit~ 69 (372)
T PRK06019 61 AEQCDVITY 69 (372)
T ss_pred HhcCCEEEe
Confidence 899998753
No 498
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=70.76 E-value=11 Score=37.40 Aligned_cols=59 Identities=15% Similarity=0.260 Sum_probs=43.3
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcchhHHHHHHHcCCchhhhccCcEEEEEccCCCCCCCCCHHHHH
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINAELFKCLKQTYGKSYQAFMLSKLVPAVGNVCENNLGLEEDLAD 187 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~~~~~~l~~~~~~~~~~~~~~kv~~v~GDl~~~~lGLs~~~~~ 187 (554)
++|++|+|.|.+..+|+-+...|++++-.| .+... .. .++.
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtV---tv~hs------------------------------~t------~~l~ 195 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLMLNAGASV---SVCHI------------------------------LT------KDLS 195 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCEE---EEEeC------------------------------Cc------HHHH
Confidence 469999999999999999999999876544 21110 01 3345
Q ss_pred HHhcCccEEEEcCCCCCc
Q 042694 188 VIAKEVDVIVNSAANTTF 205 (554)
Q Consensus 188 ~l~~~vdiViH~AA~v~~ 205 (554)
...++.|+||-+++.-++
T Consensus 196 ~~~~~ADIvV~AvG~p~~ 213 (285)
T PRK14191 196 FYTQNADIVCVGVGKPDL 213 (285)
T ss_pred HHHHhCCEEEEecCCCCc
Confidence 667889999988877665
No 499
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=70.48 E-value=15 Score=35.33 Aligned_cols=34 Identities=12% Similarity=0.218 Sum_probs=26.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEEcc
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFIINA 145 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~~~ 145 (554)
..+.+|+|+|++| +|..+++.+...+. +|+....
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~---~v~~~~~ 166 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGA---RVIVTDR 166 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCC---eEEEEcC
Confidence 4578999999999 99999887766553 5666543
No 500
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=70.44 E-value=12 Score=37.91 Aligned_cols=33 Identities=15% Similarity=0.102 Sum_probs=25.1
Q ss_pred ccCcEEEEecccccccHHHHHHHHhhCCCccEEEEE
Q 042694 108 LKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFII 143 (554)
Q Consensus 108 ~~~~~VlITGaTGFlG~~Ll~~LL~~~~~V~~i~~~ 143 (554)
..|.+|+|+||+|-+|..+++-+...|. +|+..
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~---~Vi~~ 182 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGC---YVVGS 182 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCC---EEEEE
Confidence 4688999999999999998876655543 45544
Done!